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<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC84</accession>
    <name>A0A0D5ZC84_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phenolic acid decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_02140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14905"/>
    <dbReference type="EnsemblBacteria" id="AKA44181">
        <property type="protein sequence ID" value="AKA44181"/>
        <property type="gene ID" value="PPSC2_02140"/>
    </dbReference>
    <dbReference type="GeneID" id="66574553"/>
    <dbReference type="KEGG" id="ppm:PPSC2_02140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.404"/>
    <dbReference type="HOGENOM" id="CLU_180856_1_1_9"/>
    <dbReference type="OrthoDB" id="1885676at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8299" checksum="33E27FAC91918804" modified="2015-05-27" version="1">MHICPRCESNRSEVVSHSPVKGAWEVLLCPVCLFTWRTSEPDSITDPAKYKSAFKVNPQDIPDAAHVPPIPERI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4F7</accession>
    <name>E3E4F7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Galactosyldiacylglycerol synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugtP5</name>
        <name evidence="7" type="ORF">PPSC2_12780</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyltransferase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2730"/>
    <dbReference type="CAZy" id="GT28">
        <property type="family name" value="Glycosyltransferase Family 28"/>
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    <dbReference type="EnsemblBacteria" id="ADO56697">
        <property type="protein sequence ID" value="ADO56697"/>
        <property type="gene ID" value="PPSC2_12780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2721"/>
    <dbReference type="eggNOG" id="COG0707">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028367_0_1_9"/>
    <dbReference type="OMA" id="HSYWIHP"/>
    <dbReference type="OrthoDB" id="1165736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="P:glycolipid biosynthetic process"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="Diacylglyc_glucosyltr_N"/>
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        <property type="entry name" value="Glyco_trans_28_C"/>
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        <property type="entry name" value="Glyco_tran_28_C"/>
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    </dbReference>
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        <property type="match status" value="1"/>
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    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MGDG_synth" evidence="6">
        <location>
            <begin position="20"/>
            <end position="183"/>
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    </feature>
    <feature type="domain" description="Glyco_tran_28_C" evidence="5">
        <location>
            <begin position="209"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="388" mass="43677" checksum="4A7881ABCEEB99F6" modified="2011-01-11" version="1">MNNIKREKLLILSGALGDGHMQAAKAILEASVLYKQGVEVVDFMQWIHPRMHVVERYCFLQWVKHFPSSYGYMYQKTRTDSTLTFFLKHFLTTSLQRLLKLLNEEQPTLIVSTFPLASAAISLLKEKGMTDLPAATVITDHSDHSYWIHPFTDLYLVGSEGVRAALQRKGVADHKIAVTGIPVRPSYSQTDNKDRLREKLALPLDAFVVLVMGGGCGIIDKSFIEQMQSDSFPPNVQFVIVCGRNVKLLNRLHEALGDRDNVMLTGFLEGIHEWMASADVLITKPGGLTTSEALALQLPMLLLEPRMGQEKDNASYLIQAGVAYLCQNDNLEDQLQRLVQQPSLLEEMRENAGLCRQQDSARHAVMQILSMQSDTQEEKWVCSLQQYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G0</accession>
    <name>E3E4G0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Polysaccharide deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ykoP</name>
        <name evidence="1" type="ORF">PPSC2_12795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371304.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2733"/>
    <dbReference type="EnsemblBacteria" id="ADO56700">
        <property type="protein sequence ID" value="ADO56700"/>
        <property type="gene ID" value="PPSC2_12795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2724"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114932_0_0_9"/>
    <dbReference type="OMA" id="VMIKKHR"/>
    <dbReference type="OrthoDB" id="1692349at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="209" mass="24178" checksum="202DD5F828EB61E5" modified="2011-01-11" version="1">MLLRLRKSSMQAVWMVWERGFDWISRFRGSHTSHFGICKVMIKKHRGESIVCADSTIIDRGDLVGELHLNNEKILMLIKSEDSDRAALMTARLTRKSMQQISEAFASQPEFREVKALVAITLLHRGLIHGLGFEQQPMKSDLFQRITTAYLRLLLSVMHPEGKKRIGRKTEQLIPMMLIHSRSSLRNRFMTMKRQSVSKELCLPKSRSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4R8</accession>
    <name>E3E4R8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">tRNA nucleotidyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pcnB</name>
        <name evidence="8" type="ORF">PPSC2_14450</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371645.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02100"/>
    <dbReference type="EnsemblBacteria" id="ADO57046">
        <property type="protein sequence ID" value="ADO57046"/>
        <property type="gene ID" value="PPSC2_14450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3084"/>
    <dbReference type="eggNOG" id="COG0617">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015961_3_0_9"/>
    <dbReference type="OMA" id="GHEAYWV"/>
    <dbReference type="OrthoDB" id="2018439at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031123">
        <property type="term" value="P:RNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd05398">
        <property type="entry name" value="NT_ClassII-CCAase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032810">
        <property type="entry name" value="CCA-adding_enz_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002646">
        <property type="entry name" value="PolA_pol_head_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032828">
        <property type="entry name" value="PolyA_RNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01743">
        <property type="entry name" value="PolyA_pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12627">
        <property type="entry name" value="PolyA_pol_RNAbd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13735">
        <property type="entry name" value="tRNA_NucTran2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PolyA_pol" evidence="5">
        <location>
            <begin position="31"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="PolyA_pol_RNAbd" evidence="6">
        <location>
            <begin position="179"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA_NucTran2_2" evidence="7">
        <location>
            <begin position="256"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF12627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="440" mass="50005" checksum="601085379DE4A81E" modified="2011-01-11" version="1">MNTNTWQHADPEMALRGRDVIHTLTTAGHEAYWVGGCVRDELLGRAIHDMDLTTSAEPEEVLALFPHVIPTGIQHGTVTVMQDGHAFEVTTFRTESGYTDHRRPTEVSFVKDIREDLMRRDFTMNAIAMAEHGERVDPFGGEADLRAALVRCVGRAEERFEEDGLRMLRCIRFASVFRFRVAYNTWKGMIRRREGLRHIAMERVRVELEKMLAGPDPLRGLEMLGRSGLLGCTKVPVPWEQCDAQALKEILQLPAELRWGLLLMSCRLSSEAADELLRAWTFSNAVRLRLVHLLEWETELISHAVAIADNSISRDSDPINDEVLRRNWIRLLIKLGKDTASDWLELHKTLPSSFRGLPPWVEKHVKKIAELANSWTQQAVVVRIKDLNITGNELVQAMNRPGGPWLGQMMERLLQAVACGDIPNETETLLQEVKRVMSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U6</accession>
    <name>E3E4U6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">3-dehydroquinate synthase</fullName>
            <shortName evidence="8">DHQS</shortName>
            <ecNumber evidence="8">4.2.3.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">aroB</name>
        <name evidence="10" type="ORF">PPSC2_14585</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate = 3-dehydroquinate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21968"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58394"/>
            <dbReference type="EC" id="4.2.3.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <cofactor evidence="8">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8">Binds 1 divalent metal cation per subunit. Can use either Co(2+) or Zn(2+).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="8">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 2/7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.4" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371671.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02235"/>
    <dbReference type="EnsemblBacteria" id="ADO57074">
        <property type="protein sequence ID" value="ADO57074"/>
        <property type="gene ID" value="PPSC2_14585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3112"/>
    <dbReference type="eggNOG" id="COG0337">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001201_0_2_9"/>
    <dbReference type="OMA" id="IKMAVCF"/>
    <dbReference type="OrthoDB" id="1677032at2"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00085"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003856">
        <property type="term" value="F:3-dehydroquinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00110">
        <property type="entry name" value="DHQ_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016037">
        <property type="entry name" value="DHQ_synth_AroB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030963">
        <property type="entry name" value="DHQ_synth_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030960">
        <property type="entry name" value="DHQS/DOIS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01761">
        <property type="entry name" value="DHQ_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001455">
        <property type="entry name" value="DHQ_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01357">
        <property type="entry name" value="aroB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0170">Cobalt</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="2 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8" id="KW-0520">NAD</keyword>
    <keyword evidence="3 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="DHQ_synthase" evidence="9">
        <location>
            <begin position="70"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="108"/>
            <end position="112"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="132"/>
            <end position="133"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="153"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="171"/>
            <end position="174"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="364" mass="39089" checksum="BC15E4BE670FDE22" modified="2011-01-11" version="1">MSTLTVQLGERSYPIHIGRGLLHQAGESLKERGIAQKSPLLIVSDENVAGFYLAALESNLQESGYKTVSFVVKPGETSKSLAVFEQVITAAIEGGLDRNSAVIALGGGVVGDLAGFVAASFMRGIKFVQVPTTILAHDSSVGGKVGINHPLAKNMIGAFHQPELVLYDVDTLSTLPPREVSAGLAEMIKHGLIWDADFAQWCREHATDLLALDAATLEYGLEKGCSIKAEVVSRDERENDLRAILNLGHTIGHAIEAIAGYGEFLHGEAISIGMVGSALLGVKLGADPSLVNETKEMLSSLRLPTSLPSHLDTDRLLEAMMHDKKFKEGSITFVVPRSIGRVEVVKDISVSYIREVIEQLKEEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E506</accession>
    <name>E3E506_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 14">Formate acetyltransferase</fullName>
            <ecNumber evidence="5 14">2.3.1.54</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12 14">Pyruvate formate-lyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="primary">tdcE</name>
        <name evidence="19" type="ORF">PPSC2_15240</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 14">
            <text>acetyl-CoA + formate = CoA + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:11844"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.1.54"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 14">Fermentation; pyruvate fermentation; formate from pyruvate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="14">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 14">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 14">Belongs to the glycyl radical enzyme (GRE) family. PFL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.54" evidence="5 14"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371804.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02860"/>
    <dbReference type="EnsemblBacteria" id="ADO57214">
        <property type="protein sequence ID" value="ADO57214"/>
        <property type="gene ID" value="PPSC2_15240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3253"/>
    <dbReference type="eggNOG" id="COG1882">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023898_0_0_9"/>
    <dbReference type="OMA" id="PYGGIKM"/>
    <dbReference type="OrthoDB" id="116406at2"/>
    <dbReference type="UniPathway" id="UPA00920">
        <property type="reaction ID" value="UER00891"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008861">
        <property type="term" value="F:formate C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01678">
        <property type="entry name" value="PFL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005949">
        <property type="entry name" value="Form_AcTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019777">
        <property type="entry name" value="Form_AcTrfase_GR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001150">
        <property type="entry name" value="Gly_radical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004184">
        <property type="entry name" value="PFL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01228">
        <property type="entry name" value="Gly_radical"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02901">
        <property type="entry name" value="PFL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01255">
        <property type="entry name" value="pyr_form_ly_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00850">
        <property type="entry name" value="GLY_RADICAL_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51149">
        <property type="entry name" value="GLY_RADICAL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51554">
        <property type="entry name" value="PFL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 14" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="14" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="15" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7 14" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 14" id="KW-0313">Glucose metabolism</keyword>
    <keyword evidence="10 13 14" id="KW-0556">Organic radical</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 14 19" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PFL" evidence="18">
        <location>
            <begin position="2"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="domain" description="Glycine radical" evidence="17">
        <location>
            <begin position="630"/>
            <end position="753"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="614"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="15">
        <location>
            <begin position="202"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="modified residue" description="Glycine radical" evidence="13">
        <location>
            <position position="728"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004809"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00031063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00493"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU368075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ADO57214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="753" mass="84683" checksum="34361AC2232C659D" modified="2011-01-11" version="1">MSVIERELQEQQSGWRGFKKGKWTREVNVNDFIETNISPYVGNEEFLVGPTANTTALWEIVSDLTKKELANGGVLDVDVNTPSTIISHKPGYLDRDKEQIVGVQTDAPFKRSLQPFGGIRMMIDACKAYGFEVPQSIVDIFTHIRKTHNQGVFDAYTDEMRAARKAGIITGLPDAYGRGRIIGDYRRVALYGADFLIQDKKLQLKSLEVDSMEEDVIRLREEISEQIRALNELKQMAAEHGFDISKPANNAKEAFQWVYFGYLAAIKEQNGAAMSLGRVSSFLDIYTQRDLEEGTMNEEQAQELVDHFVMKLRIVKFLRTPDYNELFSGDPTWVTESIGGMSVTGETRVTKNSFRFLHTLYNLGPAPEPNLTVLWSEKLPEGFKKYCAKVSIETSSIQYENDDLMRPIYGDDYGIACCVSAMRIGKQMQFFGARANLAKALLYAINGGKDEKSGVQVGPEFPAITSEVLDYEEVLSRFKPMMEWLAKLYMNTLNVIHYMHDKYSYERIEMALHDRDILRTMACGIAGLSVATDSLSAIKYAKVKPIRNEKGIAVDFEIEGEYPCYGNNDDRVDTIAVELVESFMSMIRKHKAYRNAVPTQSVLTITSNVVYGKKTGTTPDGRKAGEPFAPGANPMHGRDKKGALASLSSVAKLPYEHSLDGISNTFSIVPKALGKEEETRKTNLVSMMDGYFGSHAHHLNVNVFAREQLLDAMEHPENYPQLTIRVSGYAVNFIKLTREQQLDVINRTFHGTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D1</accession>
    <name>E3E5D1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cell division protein SepF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sepF</name>
        <name evidence="6" type="synonym">ylmF</name>
        <name evidence="6" type="ORF">PPSC2_16545</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer. Interacts with FtsZ.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="5">Localizes to the division site, in a FtsZ-dependent manner.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the SepF family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372076.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03880"/>
    <dbReference type="EnsemblBacteria" id="ADO57491">
        <property type="protein sequence ID" value="ADO57491"/>
        <property type="gene ID" value="PPSC2_16545"/>
    </dbReference>
    <dbReference type="GeneID" id="66576737"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3532"/>
    <dbReference type="eggNOG" id="COG1799">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078499_4_1_9"/>
    <dbReference type="OMA" id="KVGNGIF"/>
    <dbReference type="OrthoDB" id="2064885at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043093">
        <property type="term" value="P:FtsZ-dependent cytokinesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01197">
        <property type="entry name" value="SepF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023052">
        <property type="entry name" value="Cell_div_SepF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007561">
        <property type="entry name" value="Cell_div_SepF/SepF-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038594">
        <property type="entry name" value="SepF-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35798">
        <property type="entry name" value="PTHR35798"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04472">
        <property type="entry name" value="SepF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 5 6" id="KW-0132">Cell division</keyword>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0717">Septation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="17166" checksum="D26894FF90C74321" modified="2011-01-11" version="1">MGVMNKFMNFLGLQEEEEVIEREVMNTPEDQEIETPSFDKRKNQKGTNVVSIHSQKNVKVVLYEPRSYDEAQEIADHIRSHRTVVVNLQRIRKDQALRIIDFLSGTVYALSGGISKVGNNIFLCTPDTVEIQGSITEILADTEQELNRMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5J5</accession>
    <name>E3E5J5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372295.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3760"/>
    <dbReference type="EnsemblBacteria" id="ADO57714">
        <property type="protein sequence ID" value="ADO57714"/>
        <property type="gene ID" value="PPSC2_17580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3756"/>
    <dbReference type="eggNOG" id="ENOG5033EIG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1775637_0_0_9"/>
    <dbReference type="OMA" id="DHQKEMI"/>
    <dbReference type="OrthoDB" id="1519611at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="17812" checksum="141A7C24ACC0D8A3" modified="2011-01-11" version="1">MTTINTLQTKLSSRYDEFDPEQDENKNTKFADLIIDGRSLYQMLKKHDLVPSLGWGSEDHQKEMIQYFLLKKPHEHMYYRYPILVCPWCGDEECGYISVKIDREEEIVVWKDFKLEHENKPINIGPFYFEWANYERVIHDTFGIIEKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5S0</accession>
    <name>E3E5S0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">blt7</name>
        <name evidence="10" type="ORF">PPSC2_18630</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. TCR/Tet family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372525.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05850"/>
    <dbReference type="EnsemblBacteria" id="ADO57947">
        <property type="protein sequence ID" value="ADO57947"/>
        <property type="gene ID" value="PPSC2_18630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3992"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_11_9"/>
    <dbReference type="OMA" id="PMMAYVA"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="39"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="69"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="131"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="159"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="212"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="248"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="279"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="303"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="342"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="365"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="4"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="385" mass="41712" checksum="8FA0BED95D3CF937" modified="2011-01-11" version="1">MKRILAILMINIFIVMVGVGLITPILPELIIEFGASGRAIGLLVAAYGITQFLLSPMTGQLSDRYGRKVFIVVGVIVFAVAKLIFAIGDDLWMLYTSRLLEGVAAALIIPPMMAYVADITTTEERGKGNSLLAAAMSFGFVIGPGLGGLLAGYGTRVPLYTATGAAMIAVIFSIVCLPESLSKEQMKAARARINHQRESIFKQYARSLKSKYAMFFVIVLVMTFGLANFESVLGLYVTNRFQFSPQNISILLTAGAVIGVGMQALVVAKMIHQFGEKRLIKGSLLFTSAAYILFLFAKDFWSIFLVTSLIFFATATLRPALNTQLSKMAGNEQGYVAGMNNAYMSVGNILGPTLAGFLFDANMFAPFLTGCCILLITFLITLKMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5U5</accession>
    <name>E3E5U5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Thiamine-phosphate synthase</fullName>
            <shortName evidence="8">TP synthase</shortName>
            <shortName evidence="8">TPS</shortName>
            <ecNumber evidence="8">2.5.1.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Thiamine-phosphate pyrophosphorylase</fullName>
            <shortName evidence="8">TMP pyrophosphorylase</shortName>
            <shortName evidence="8">TMP-PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">thiE</name>
        <name evidence="12" type="ORF">PPSC2_19715</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate + 4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + 2 H(+) = CO2 + diphosphate + thiamine phosphate</text>
            <dbReference type="Rhea" id="RHEA:47848"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37575"/>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
            <dbReference type="ChEBI" id="CHEBI:62890"/>
            <dbReference type="EC" id="2.5.1.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 9">
            <text>2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate + 4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + 2 H(+) = CO2 + diphosphate + thiamine phosphate</text>
            <dbReference type="Rhea" id="RHEA:47844"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37575"/>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
            <dbReference type="ChEBI" id="CHEBI:62899"/>
            <dbReference type="EC" id="2.5.1.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 9">
            <text>4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + 4-methyl-5-(2-phosphooxyethyl)-thiazole + H(+) = diphosphate + thiamine phosphate</text>
            <dbReference type="Rhea" id="RHEA:22328"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37575"/>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
            <dbReference type="ChEBI" id="CHEBI:58296"/>
            <dbReference type="EC" id="2.5.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 8 10">Cofactor biosynthesis; thiamine diphosphate biosynthesis; thiamine phosphate from 4-amino-2-methyl-5-diphosphomethylpyrimidine and 4-methyl-5-(2-phosphoethyl)-thiazole: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the thiamine-phosphate synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.3" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372736.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06935"/>
    <dbReference type="EnsemblBacteria" id="ADO58164">
        <property type="protein sequence ID" value="ADO58164"/>
        <property type="gene ID" value="PPSC2_19715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4203"/>
    <dbReference type="eggNOG" id="COG0352">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018272_3_2_9"/>
    <dbReference type="OMA" id="ITAFQFR"/>
    <dbReference type="OrthoDB" id="1558094at2"/>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00141"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004789">
        <property type="term" value="F:thiamine-phosphate diphosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00564">
        <property type="entry name" value="TMP_TenI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00097">
        <property type="entry name" value="TMP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036206">
        <property type="entry name" value="ThiamineP_synth_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022998">
        <property type="entry name" value="ThiamineP_synth_TenI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034291">
        <property type="entry name" value="TMP_synthase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02581">
        <property type="entry name" value="TMP-TENI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51391">
        <property type="entry name" value="SSF51391"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00693">
        <property type="entry name" value="thiE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8 9" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="5 8 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TMP-TENI" evidence="11">
        <location>
            <begin position="16"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="region of interest" description="HMP-PP binding" evidence="8">
        <location>
            <begin position="45"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="THZ-P binding" evidence="8">
        <location>
            <begin position="144"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="THZ-P binding" evidence="8">
        <location>
            <begin position="196"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine</name>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine</name>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine</name>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:62899"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="24464" checksum="E115A209C789250B" modified="2011-01-11" version="1">MSGRILPEIMRRHLQMYLVVGSVNCLAEPSRVVQEALAGGTTMIQFREKGRSALTGVPMLELARQLQDLCHHAGIPFIVNDDVELALELNADGVHIGQDDESADSVRARIGNRILGVSAHTIEEARRAILQGADYLGVGPIYPTISKDDAHAVQGPAILYEMRKAGIDLPIVGIGGITIDRVKEVVSAGADGVAVISAVTQAEQIRVAAEGLKKKVVLSIKHPGMSQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y9</accession>
    <name>E3E5Y9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ATP-grasp domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_19920</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372780.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07140"/>
    <dbReference type="EnsemblBacteria" id="ADO58208">
        <property type="protein sequence ID" value="ADO58208"/>
        <property type="gene ID" value="PPSC2_19920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4245"/>
    <dbReference type="eggNOG" id="COG0027">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040535_0_0_9"/>
    <dbReference type="OMA" id="KGHRMPA"/>
    <dbReference type="OrthoDB" id="1232897at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="3">
        <location>
            <begin position="162"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="411"/>
            <end position="472"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="510" mass="56115" checksum="3AB533503B5D6DC3" modified="2011-01-11" version="1">MNAIPNQRHLYMGTFEAEAYWRDSELASLPALPDRASSAIVAAMDELLFSFCQPGDALLTRFAISPVHRQYIAQLGFHPAVNERDLTDGMEQAGNVSAASVFELLSSRKSDTGEGFPQLEGCVLSPFAGLPHVEEAARAWGITLHQPPLETIRKVNAKTYSSELKRSLGLRNPGHIVTSFADVAEAGRKLLRDGSFLIKDDFGVSGKGNLHITSTQMLDRVVSYLRGQERKGKRVLFLLEPFLEKEQDFSCQFTIGDDGRVDIVSVQWLANTQFAYRESLSPDRAFMERLERDGYFSLMQDVGQQLYRDGYYGDVCIDSMTLRGGKLEPIIEINARKSMSLIKHQLDTYLAGKNMRGTLTNYSLSHDGSLSYEELLLGLEGEGLLFTGECEEGVMPLGANTLYVNTGGRDGENRIVGHTPVPSRNATGRGGRSSAKQVRISGIGAGDGGSEGNGMGQPDLSGTKEADGNERARGKGRLYLELVAANDEEKMRLTTKLERFLAERHFTVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E630</accession>
    <name>E3E630_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycoside hydrolase family 5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">celN</name>
        <name evidence="8" type="ORF">PPSC2_12860</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371319.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00505"/>
    <dbReference type="CAZy" id="CBM13">
        <property type="family name" value="Carbohydrate-Binding Module Family 13"/>
    </dbReference>
    <dbReference type="CAZy" id="CBM32">
        <property type="family name" value="Carbohydrate-Binding Module Family 32"/>
    </dbReference>
    <dbReference type="CAZy" id="GH5">
        <property type="family name" value="Glycoside Hydrolase Family 5"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56715">
        <property type="protein sequence ID" value="ADO56715"/>
        <property type="gene ID" value="PPSC2_12860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2739"/>
    <dbReference type="eggNOG" id="COG2730">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3325">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5498">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_352970_0_0_9"/>
    <dbReference type="OrthoDB" id="656524at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00063">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd00161">
        <property type="entry name" value="RICIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000421">
        <property type="entry name" value="FA58C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003961">
        <property type="entry name" value="FN3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036116">
        <property type="entry name" value="FN3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035992">
        <property type="entry name" value="Ricin_B-like_lectins"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000772">
        <property type="entry name" value="Ricin_B_lectin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00754">
        <property type="entry name" value="F5_F8_type_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00041">
        <property type="entry name" value="fn3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14200">
        <property type="entry name" value="RicinB_lectin_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00231">
        <property type="entry name" value="FA58C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00060">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00458">
        <property type="entry name" value="RICIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49265">
        <property type="entry name" value="SSF49265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50370">
        <property type="entry name" value="SSF50370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50022">
        <property type="entry name" value="FA58C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50853">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50231">
        <property type="entry name" value="RICIN_B_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168641" evidence="4">
        <location>
            <begin position="26"/>
            <end position="802"/>
        </location>
    </feature>
    <feature type="domain" description="F5/8 type C" evidence="5">
        <location>
            <begin position="13"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="7">
        <location>
            <begin position="165"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="Ricin B-type lectin" evidence="6">
        <location>
            <begin position="256"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="7">
        <location>
            <begin position="406"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="154"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="802" mass="86539" checksum="1104B933EE7DE794" modified="2011-01-11" version="1">MKKTITCLILFGLLMSMLPFKNVSAFENARLTQSATASSVEDSSKAADFAIDGDPQTRWSSQYSDPQWISVDLGSTTKINGVTLNWEAAYAKSYQVQTSTDDDHWTTVYSTTTGDGGIDKISFEVTDARYVKMNGIERATSYGYSLWEFEVHSADEPEDNSPPTAPSNLTSSSVSDTTVSLQWTESTDNVGVSSYDIYKGSDLVGSSASTSFIVTGLTANMAYSFYVKARDTAGNVSDASNVIDVTTSAADTNIVSGETYKLTAQHSGKNLEAGDSTADGAKVQQWTNNGSARQRWKVIDVGDGYYKLIVQSSGKALTVVGGSSEDGASVQQWTDSDLTNQKWKMIDVGGGYYKLLVQSSGKALDVIGGYTNDGANVQQWTDNGNDQQKWKFTLVDSTPDTTAPTAPANLKSYSKTNTSVSLVWTASTDDVDVTSYDVYNGTTLVDSTPTTSYTVTGLSANTTYSFTVKARDAAGNISTASNVLKVTTNSTTENTGFYINGTTLYDAKGNPFVMRGINHAYTWYKGQESVAIPAIAKTGANTIRIVLSDGQQWTKDDLSAIQNLITLSEQNKLVVVLEVHDGTGSDSATVLDNITNYWIEMKSALIGKESTVILNIANEWYGTWDGGGWAQGYKSVIPKLRNAGIKNTIIVDGAGWGQYPQSIFDYGKEVFNADPLKNTMFSIHMYEYAGGNAATVKSNMDNVLNKNLALLIGEFGIKHTSGDVDEATIMSYAEQKGVGYLAWSWKGNSPGLDYLDMTTDWQGSSLTEQGRIIIEGPNGIRATSKLSSVYSDSSNKQSSSKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E633</accession>
    <name>E3E633_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371322.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00555"/>
    <dbReference type="EnsemblBacteria" id="ADO56718">
        <property type="protein sequence ID" value="ADO56718"/>
        <property type="gene ID" value="PPSC2_12870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2743"/>
    <dbReference type="eggNOG" id="ENOG502ZC6N">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058037_0_0_9"/>
    <dbReference type="OMA" id="YLLEWAL"/>
    <dbReference type="OrthoDB" id="1236284at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025368">
        <property type="entry name" value="DUF4272"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14094">
        <property type="entry name" value="DUF4272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="393" mass="44461" checksum="401F307698B5D459" modified="2011-01-11" version="1">MRNCALYSSTFDLDQVERLLESIYPNNKIHVNESKTRVEVKSKGWFNKKVKGFNIMTSKTNPEEFASMLNGMINFFSQIPAENEQLQQKLLIKMSTLNMVIGVETEEDISEAFFAELLDIINSLDGLMFWGGGNLLAPDGSLLLDVNGRSEVEDYTVTAHVSYLHGEDPISESGMERKLRSEKKLVDQGFTQMPPIPGRLGDEAADSIRSLKEVAGRAVALCIVALKGECIGAGESKDDTKRMINQVTDQYGADRFFSPEEKRFLSNDDVDESEGIQFSWRYEGFWTLLWALGHLEKLGDPTGICDVPLSVSKLQQFDSFEAFLSSSRLRSSKEILDEADLICRYDWMCVDSRIHKQPAPGNLDDGVVYERHRVLKWLTSYMGQDWDDVRTDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E662</accession>
    <name>E3E662_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Peptide ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pstB7</name>
        <name evidence="8" type="ORF">PPSC2_13030</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371351.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E662"/>
    <dbReference type="STRING" id="1406.LK13_00720"/>
    <dbReference type="EnsemblBacteria" id="ADO56747">
        <property type="protein sequence ID" value="ADO56747"/>
        <property type="gene ID" value="PPSC2_13030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2775"/>
    <dbReference type="eggNOG" id="COG0444">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_23_9"/>
    <dbReference type="OMA" id="IADRMII"/>
    <dbReference type="OrthoDB" id="1101128at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="2"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="256"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="30861" checksum="F519C7B356A43DDB" modified="2011-01-11" version="1">MLTIEDLTIRTKAKTIVEQLELAIRPGEWCALAGESGSGKSMTAFAIGGLLPASVSAEGIIMWNDENLLALPVKQRRSLLGSEISYVFQDYHGAFTPFLRVGSQLDELMRAHGKQDRKARKQRCLEVLEHVQLPAERVYRSYPFELSGGQLQRAAIAAALLLEPKLLIADEPTTALDTLTAHRVLQLIDQIRMETGISVLWITHDLRHVRKYADRVAVMRTGVLLEAGQTQAVLDHPAHPYTRRLLAAIPPLSPDAPSRLPCNSTDEQLAPERSILHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E679</accession>
    <name>E3E679_PAEPS</name>
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        <recommendedName>
            <fullName evidence="2">Cu_amine_oxidN1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_13115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2798"/>
    <dbReference type="EnsemblBacteria" id="ADO56764">
        <property type="protein sequence ID" value="ADO56764"/>
        <property type="gene ID" value="PPSC2_13115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2792"/>
    <dbReference type="HOGENOM" id="CLU_104167_0_0_9"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168018" description="Cu_amine_oxidN1 domain-containing protein" evidence="1">
        <location>
            <begin position="33"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="65"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="164" mass="18496" checksum="5B13D646AF9A0C7A" modified="2011-01-11" version="1">MKLDRTGFQRLFVALLMLPLLLTTIHQGDAEAAKQESTAPQATQLTDIVIAGQPLNNKIKPLLIDGKLMVPLKPYAEAVGASYHWDAKQKQITLQKWAEPLILKEQLRKNQQQLTFKVVGKDVYVPLRDVSLELGYTLEKTNTQIQIEPPIHGKLKEQLYEGIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6A2</accession>
    <name>E3E6A2_PAEPS</name>
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        <submittedName>
            <fullName evidence="4">Serine/threonine protein phosphatase</fullName>
        </submittedName>
    </protein>
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        <name evidence="4" type="ORF">PPSC2_18735</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05950"/>
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        <property type="protein sequence ID" value="ADO57971"/>
        <property type="gene ID" value="PPSC2_18735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18735"/>
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    <dbReference type="eggNOG" id="COG0457">
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    </dbReference>
    <dbReference type="eggNOG" id="COG0631">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017346_1_0_9"/>
    <dbReference type="OMA" id="THEERGN"/>
    <dbReference type="OrthoDB" id="234045at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="258"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="PPM-type phosphatase" evidence="3">
        <location>
            <begin position="9"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="508"/>
            <end position="625"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="537"/>
            <end position="625"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="625" mass="68289" checksum="A29D8D565A13EF49" modified="2011-01-11" version="1">MRKDNSDFSTAFVSEAGSYIDNRDYFAFMETDDMACYVLADGLDSDQELRSAEMVVKTVLENFMEKPSMSKRRLMRDLREAQEWLQFESRRVRLKASLLMVVTNYNKMVYVSCGNVRLYHFRNGRLNFRSKDHSLAQSLADDGRIPDEATSTHEERGNLLEYLGNPNGVHAHFAKKTQLADGDVMLLATSGMWEDVELAEMLGALEEAKDPGMLTDTLEEVLLSKQRRTVNNYTAAAIYVNKVFQEKPKNRRKLIKRILIALLAFVIVGGGAWITLARMAANKAAALETMIESAQAADDYARAGDYAKALKSYSEAKNAAVKINDKIHKRLYTAEQKVSQLMVDGDGYVEKADFTKAEASYDKARKSAGLYPPFNVKDIEKKIDQLDSYAETASWMKDGDLKFQGGDYTNALKLYKKANKAAMESGYTSAQKELEKKITETNDKLTSIQQQLKEIQAGKLQAKGDRLMKDLDYEGAIDAYSGAQEIYQEIDKLESVLALERSIAKAEEKQSAEQQQNGQLPAGLGLSDGAMNDTDTGDAASEASSSAKATSATALQTKVAPTASTGTTSAKKEASPAAKSSGTGDGNAASIKADTSKEQGTADSASKAAGASNSESLDQAAANGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H2</accession>
    <name>E3E6H2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372616.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4091"/>
    <dbReference type="EnsemblBacteria" id="ADO58041">
        <property type="protein sequence ID" value="ADO58041"/>
        <property type="gene ID" value="PPSC2_19060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4084"/>
    <dbReference type="HOGENOM" id="CLU_2396866_0_0_9"/>
    <dbReference type="OMA" id="VECLDIQ"/>
    <dbReference type="OrthoDB" id="1924638at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="13270" checksum="D421801DA49BBFBD" modified="2011-01-11" version="1">MKLLTLSKEIREGKIGDDQLVECLDIQHNQVQLNAMSQIAKKKLCNEKIIEKLKHISQFRDPKVNKLFGIDTLGHYSIAVLRVLNTSESIKQYELLMSELDDFDKGIVERITEGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H4</accession>
    <name>E3E6H4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372618.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4093"/>
    <dbReference type="EnsemblBacteria" id="ADO58043">
        <property type="protein sequence ID" value="ADO58043"/>
        <property type="gene ID" value="PPSC2_19070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4086"/>
    <dbReference type="eggNOG" id="COG4842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1184119_0_0_9"/>
    <dbReference type="OMA" id="TIREAMF"/>
    <dbReference type="OrthoDB" id="1909475at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036689">
        <property type="entry name" value="ESAT-6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010310">
        <property type="entry name" value="T7SS_ESAT-6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06013">
        <property type="entry name" value="WXG100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140453">
        <property type="entry name" value="SSF140453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="26189" checksum="80E207816288AF16" modified="2011-01-11" version="1">MTTIKVTPEQLMTISKQFELAQQKVTQMNSILIQQISSMERFWDGVTKEQFYYSFQTSQKNMNGFVALTDSVAKELRRHADKFRLADLLEAGNIDSSCLPPPPNSCAPPAPDTRNALEKSADSLVELGDDFLSAAEDRYEKRYDSVGGFLDYWTFGIPKGLYQGYAERASKQFDSGNDFFNFWTFGVHGTIREAMFPTNAWSKEHWANMIGTAGIFGGVSSVIKPKIGLGSSMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6I7</accession>
    <name>E3E6I7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase family 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372819.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4297"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58247">
        <property type="protein sequence ID" value="ADO58247"/>
        <property type="gene ID" value="PPSC2_20100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4284"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_610901_0_0_9"/>
    <dbReference type="OMA" id="THNSIDI"/>
    <dbReference type="OrthoDB" id="957193at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="4"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="464" mass="53221" checksum="4CCD1B82EC2967D3" modified="2011-01-11" version="1">MLVSIVILTLNNWKLTERCLDSIVRYTTIPYELICIDNGSTDGTQHQLRRRENVRLIENETNRGFAAACNQGIKASIGDTILLLNNDTMVSHHWLENLIHALFSSADIGIVGPVSNMVMPMQRLPMSYSTTETYHEFSKNFNVTNPSLWRDTTALSGFCMLFRRQLISQIGYLDEAFPGGGYEDIDFGYRTLKKGLRLLIAGDSHVHHEGNASFTHNSIDIVEWGQRNRRIFLRKWNFNPERLIYTLDEYFFPGQFAAGHPHHRPKDSSLPNGILIRDSKGNIYQIEKGLKRPVESLDTFHALHFRLDRVIQLSDSTVTSIPDGKPLLHNGQLREHFPAVYIARDPMNGMHLISHGLRYPFRDFESFRLLGYEVNESIPLSFAQLETFPIGPPIDTNVFEEHELIDYRLYMGPDHGLYYAEGGWLRPIPSKREVHVFRWHTQPPIPLPTDVFNRSPQGPTIVAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L2</accession>
    <name>E3E6L2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_20205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372844.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4322"/>
    <dbReference type="EnsemblBacteria" id="ADO58272">
        <property type="protein sequence ID" value="ADO58272"/>
        <property type="gene ID" value="PPSC2_20205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4306"/>
    <dbReference type="eggNOG" id="ENOG5033WBR">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_119040_0_0_9"/>
    <dbReference type="OMA" id="FWLMQKF"/>
    <dbReference type="OrthoDB" id="1377529at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025828">
        <property type="entry name" value="Put_sensor_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13796">
        <property type="entry name" value="Sensor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="Sensor" evidence="2">
        <location>
            <begin position="15"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="22671" checksum="B35D3A869DB0F0F8" modified="2011-01-11" version="1">MTKESARKRLQDFYFLLFTFGSGLFYFCFYLVSITFALGMAVIFVGIPLLACVLRTTHTFVQYERIQTKVYTDISIEPILTRTNSGRDKWMKAREAILNSSNWRAVFWLMQKFFIGVISLICAVILYIAPIVFIVTPILFQHLDIYLWGFAVDSWEKAICVMLAGCILVWINTRIGNSLVQIVGMYTHSMFKAIKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R5</accession>
    <name>E3E6R5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phospholipid phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pap2c</name>
        <name evidence="3" type="ORF">PPSC2_21190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373036.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08420"/>
    <dbReference type="EnsemblBacteria" id="ADO58467">
        <property type="protein sequence ID" value="ADO58467"/>
        <property type="gene ID" value="PPSC2_21190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4504"/>
    <dbReference type="eggNOG" id="COG0671">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072573_3_0_9"/>
    <dbReference type="OMA" id="FLYWDER"/>
    <dbReference type="OrthoDB" id="1928533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="2">
        <location>
            <begin position="102"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="26954" checksum="229C071D94FDAC41" modified="2011-01-11" version="1">MLSHEPQRFRFLPSYLRRSLSASMIMIAVLLLIAYSVRWIGTAPFLYWDERIQDIVFPDTAAAHYQLLPVAIFITSLGSFRISLLIAIGTAILCWVYLRSKAYSFAILSSFTAMWVLNTIIKEFLQRERPSLQHLVEAGGYSFPSGHAMISMGFYGMIFAIWAIERMVHKRTFFLPCVLGALLILLIGLSRVYLGVHFPTDIVGGYIAGMIWLVFTVPVVYWQARLWPSSPLSLPRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W8</accession>
    <name>E3E6W8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Xylulose kinase</fullName>
            <shortName evidence="3 5">Xylulokinase</shortName>
            <ecNumber evidence="3 5">2.7.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">xylB1</name>
        <name evidence="3 5" type="synonym">xylB</name>
        <name evidence="8" type="ORF">PPSC2_21435</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the phosphorylation of D-xylulose to D-xylulose 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 5">
            <text>ATP + D-xylulose = ADP + D-xylulose 5-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10964"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17140"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57737"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.17"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the FGGY kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.17" evidence="3 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373088.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08630"/>
    <dbReference type="EnsemblBacteria" id="ADO58520">
        <property type="protein sequence ID" value="ADO58520"/>
        <property type="gene ID" value="PPSC2_21435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4557"/>
    <dbReference type="eggNOG" id="COG1070">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009281_3_0_9"/>
    <dbReference type="OMA" id="WHVMGVT"/>
    <dbReference type="OrthoDB" id="1619686at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004856">
        <property type="term" value="F:xylulokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005998">
        <property type="term" value="P:xylulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02220">
        <property type="entry name" value="XylB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000577">
        <property type="entry name" value="Carb_kinase_FGGY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018483">
        <property type="entry name" value="Carb_kinase_FGGY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006000">
        <property type="entry name" value="Xylulokinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000538">
        <property type="entry name" value="GlpK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01312">
        <property type="entry name" value="XylB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00933">
        <property type="entry name" value="FGGY_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00445">
        <property type="entry name" value="FGGY_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 3 5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 4 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <keyword evidence="1 3 5" id="KW-0859">Xylose metabolism</keyword>
    <feature type="domain" description="FGGY_N" evidence="6">
        <location>
            <begin position="12"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="7">
        <location>
            <begin position="266"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="91"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <feature type="site" description="Important for activity" evidence="3">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="507" mass="55611" checksum="022FA71408FFD171" modified="2011-01-11" version="1">MQEKLKQELERYVIGVDLGTSAVKTVLVNRKGQVAYETSQSYPLHQPKAGYSEQQPEDWVRGTLASLKELVEKAGISGTDAVDGISFSGQMHGLVLTDKEGQVLRPAILWNDTRTTAQCRRIEEQLGPALLSIARNRALEGFTLPKLLWVQEHEPDVLARAAHFMLPKDYVRYCLTGGLAMEYSDAAGTLLLDIANKQWSEEIAAAFDLPLSLFPPLVESFDQTGTLLPEIAEQSGLSSETKVYAGGADNACGAIGAGILSEGRTLCSIGTSGVVLSYEERKDIDVQGRAHFFNHGEQDAYYIMGVTLAAGYSLTWFKDTFAPEHSFDALLEDVNSIEPGSRGLLFTPYIVGERTPHPDAAIRGSFIGMDAGHKLPHFTRAVLEGITFSLKESIDILRGTGKTVNEVISIGGGARNETWLQMQADIFNADIVKLESEQGPALGAAMLAAYGSGWFESLQACAEAFLREAARYTPNPERVAQYEGLYELYREVYLHTRELSEQLAVYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Y0</accession>
    <name>E3E6Y0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">N-acetylmuramoyl-L-alanine amidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cwlD3</name>
        <name evidence="3" type="ORF">PPSC2_22260</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373246.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09725"/>
    <dbReference type="EnsemblBacteria" id="ADO58682">
        <property type="protein sequence ID" value="ADO58682"/>
        <property type="gene ID" value="PPSC2_22260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4720"/>
    <dbReference type="eggNOG" id="COG0860">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014322_7_0_9"/>
    <dbReference type="OMA" id="QIRPVHH"/>
    <dbReference type="OrthoDB" id="1184688at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008745">
        <property type="term" value="F:N-acetylmuramoyl-L-alanine amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02696">
        <property type="entry name" value="MurNAc-LAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002508">
        <property type="entry name" value="MurNAc-LAA_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014234">
        <property type="entry name" value="Spore_CwlD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01520">
        <property type="entry name" value="Amidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00646">
        <property type="entry name" value="Ami_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02883">
        <property type="entry name" value="spore_cwlD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="MurNAc-LAA" evidence="2">
        <location>
            <begin position="131"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="29162" checksum="3F3AA945C574C8C4" modified="2011-01-11" version="1">MQKNNRKKEVTLWIRYRTLQKVLLGCCLAVLFIMLTLYEIPASRAWIHWSLPLTGKVIAIDAGHGGPDGGAVSKEGVIEKDINLAIAFYLRDYLQQAGAVVVMTREDDRDLAQQETKGYSRRKTEDLKQRVRMIEEQKADLFLSIHMNSIPSSRWSGAQTFFVPNHADNENLASLIQEEIKRNLENTDRVAKTVNTVYLLKALKMPAALVEVGFLSHPEEARRLSDENYQRQVAASIYKGILRYSAGEKGTSSAPEVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E716</accession>
    <name>E3E716_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 9">50S ribosomal protein L23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">rplW</name>
        <name evidence="10" type="ORF">PPSC2_22425</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the universal ribosomal protein uL23 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373266.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09890"/>
    <dbReference type="EnsemblBacteria" id="ADO58718">
        <property type="protein sequence ID" value="ADO58718"/>
        <property type="gene ID" value="PPSC2_22425"/>
    </dbReference>
    <dbReference type="GeneID" id="66575582"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4754"/>
    <dbReference type="eggNOG" id="COG0089">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037562_3_2_9"/>
    <dbReference type="OMA" id="FEVDHRA"/>
    <dbReference type="OrthoDB" id="1978865at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01369_B">
        <property type="entry name" value="Ribosomal_L23_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_L23/L15e_core_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001014">
        <property type="entry name" value="Ribosomal_L23/L25_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013025">
        <property type="entry name" value="Ribosomal_L25/23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11620">
        <property type="entry name" value="PTHR11620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00276">
        <property type="entry name" value="Ribosomal_L23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="SSF54189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00050">
        <property type="entry name" value="RIBOSOMAL_L23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 7 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="11147" checksum="1DC327DBA231BE0F" modified="2011-01-11" version="1">MKDPRDIIKRPIITERTAGMMNDLKYVFEVDIRSNKVEVKKAIEAIFNVKVSNVNTLRVPAKPKRYGRHSGYTSEWKKAFVTLSKDSKPLEFFETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E752</accession>
    <name>E3E752_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_23305</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373443.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10795"/>
    <dbReference type="EnsemblBacteria" id="ADO58907">
        <property type="protein sequence ID" value="ADO58907"/>
        <property type="gene ID" value="PPSC2_23305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4934"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_2_9"/>
    <dbReference type="OMA" id="YASTDWG"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="107"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="140"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="244"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="72"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="31039" checksum="2D87FF86E6D76F5D" modified="2011-01-11" version="1">MEKTSNYRLSTWVAEILLIVVGLIFLVPFYFLLVNSVKSFGDILAHSASWPTTFRFENYANAWNKINFPTALGNSLIVTIVSNALLLLISSMAAYQMVRHDTLFNRFLFGLLVAAMVVPFQSIMLPLMEVSNVLSLNNSIPGLILCYLGFGAPLSVFLFHGFIKTVPIEVEQAARVDGSSRYGVFFRIVCPLLLPMFVTVLILNTLWIWNDYLLPSLILNDPELRTIPIATYMLFGQYTKQWDLALPALVLGITPIVVFFLVMQKYIVSGIAAGAVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7B2</accession>
    <name>E3E7B2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phytoene dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">crtI</name>
        <name evidence="2" type="ORF">PPSC2_23590</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373503.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11095"/>
    <dbReference type="EnsemblBacteria" id="ADO58967">
        <property type="protein sequence ID" value="ADO58967"/>
        <property type="gene ID" value="PPSC2_23590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4994"/>
    <dbReference type="eggNOG" id="COG1233">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019722_1_2_9"/>
    <dbReference type="OMA" id="AFMFADW"/>
    <dbReference type="OrthoDB" id="418913at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="1">
        <location>
            <begin position="13"/>
            <end position="490"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="494" mass="54918" checksum="FC53502EDBF8B0B5" modified="2011-01-11" version="1">MNQYDVIVIGAGLGGLSCAARLSALGYRTAVFESHTLAGGFATEFTRKGYTFDVSLHGVGGLEEGSFGRMLKDCHVDQQIVPLRKKHPYSIRWEGQTIDIPSDVREYTQLLKGMFPAETAAIDKLFAGIRRFEAGFSAFSSRTSWRKMAGLLKAGTFFRWTQMTTWEAVSQFGLSDRFTEFFTALWAYYGLPPKRLAALYFFIPWMGYHLEGTYYIQGGAQALSNALVEAIQSAGGEVHLRSQVSEIILERGKAAGVRLNKGDVYKANWVVSGISPHHTYGRLLENHHAARRELEAVTKMETGTSLTQLYLGLSCEPRELGITEEDLILCNEPDSETDYEVMMSGQYTKGNWMFTNYNAMDPTLNEAGKGVITVTFLDRLENWPSARPEYKAKKEAVKQQILERLEQLYPGFSSKVVVAELGTPRTMQRYTANPGGAVYGFAQTVRQSGIHRLKHKSAVNRLSLVGAWTQPGGGFQGAMNSGIMEADRIAAKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C2</accession>
    <name>E3E7C2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373667.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5196"/>
    <dbReference type="EnsemblBacteria" id="ADO59133">
        <property type="protein sequence ID" value="ADO59133"/>
        <property type="gene ID" value="PPSC2_24355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5157"/>
    <dbReference type="HOGENOM" id="CLU_119037_0_0_9"/>
    <dbReference type="OMA" id="ARSPWIS"/>
    <dbReference type="OrthoDB" id="2016355at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168220" evidence="1">
        <location>
            <begin position="27"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="14834" checksum="9AAC6DDA51CFCBE8" modified="2011-01-11" version="1">MKFTKKLIKSLAVVAIIGSISASAYASSTIEGGWIEGKGNFSNNNSRQELSLRAAKSVPDHQGYTEAKPGNSDLERAVAITKWEGEYHYSRAQLTWAGSVRLDSDRQWGWDRTRAVTGYGEAILVARTFYGGSQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C6</accession>
    <name>E3E7C6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373671.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11865"/>
    <dbReference type="EnsemblBacteria" id="ADO59137">
        <property type="protein sequence ID" value="ADO59137"/>
        <property type="gene ID" value="PPSC2_24370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5161"/>
    <dbReference type="eggNOG" id="COG0662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137371_1_0_9"/>
    <dbReference type="OMA" id="FTKRIVH"/>
    <dbReference type="OrthoDB" id="1928636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="33"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12530" checksum="14F1DE6A58DCDA3B" modified="2011-01-11" version="1">MKKSNLIQFQEYKEAAFTKRIVHKEADNVIFILNFTPNAELPTHNHPGANVYLLVLEGSGTVTVNGEETEVVQGDMIHITGDEHFSYRGSAEANSSLHVVLTKTPSESYAQNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C9</accession>
    <name>E3E7C9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Rubredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PPSC2_24385</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6 7">
            <name>Fe(3+)</name>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
        </cofactor>
        <text evidence="6 7">Binds 1 Fe(3+) ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the rubredoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373674.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11880"/>
    <dbReference type="EnsemblBacteria" id="ADO59140">
        <property type="protein sequence ID" value="ADO59140"/>
        <property type="gene ID" value="PPSC2_24385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5164"/>
    <dbReference type="eggNOG" id="COG1773">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_128747_3_3_9"/>
    <dbReference type="OMA" id="APKDMFE"/>
    <dbReference type="OrthoDB" id="2047418at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00730">
        <property type="entry name" value="rubredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024922">
        <property type="entry name" value="Rubredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024934">
        <property type="entry name" value="Rubredoxin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024935">
        <property type="entry name" value="Rubredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018527">
        <property type="entry name" value="Rubredoxin_Fe_BS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00301">
        <property type="entry name" value="Rubredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000071">
        <property type="entry name" value="Rubredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00163">
        <property type="entry name" value="RUBREDOXIN"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00202">
        <property type="entry name" value="RUBREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50903">
        <property type="entry name" value="RUBREDOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5 6 7" id="KW-0408">Iron</keyword>
    <keyword evidence="3 6 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Rubredoxin-like" evidence="8">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="6"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000071-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="56" mass="6228" checksum="DAD3622149D78176" modified="2011-01-11" version="1">MKKYVCQPCGYVYDPAMGDPDEDVMPGTAFEDLPEDWVCPVCGEDQSHFAPIDDAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8A5</accession>
    <name>E3E8A5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutamine amidotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pfpI1</name>
        <name evidence="3" type="ORF">PPSC2_15635</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C56 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371884.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03285"/>
    <dbReference type="MEROPS" id="C56.001"/>
    <dbReference type="EnsemblBacteria" id="ADO57297">
        <property type="protein sequence ID" value="ADO57297"/>
        <property type="gene ID" value="PPSC2_15635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3338"/>
    <dbReference type="eggNOG" id="COG0693">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_44_4_9"/>
    <dbReference type="OMA" id="IGKYGVP"/>
    <dbReference type="OrthoDB" id="1421548at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006286">
        <property type="entry name" value="C56_PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42733">
        <property type="entry name" value="PTHR42733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01382">
        <property type="entry name" value="PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51276">
        <property type="entry name" value="PEPTIDASE_C56_PFPI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="2">
        <location>
            <begin position="7"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="19676" checksum="2B2C20CCAB265A01" modified="2011-01-11" version="1">MSRLTGKKVIALVDEEFEDLELWYPVYRVREEGAEVHLAGAEKGKKYIGKYGVPAEAEYAFEELNSSDYDGILVPGGWAPDKLRRYPKVIQLVQEFHAAHKPIGQICHAGWVLISAKILDGVTVTSTPGIRDDMENAGAIWKDEAVVTDGHIVSARRPPDLPPYGKAFCDVLANSARK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8H8</accession>
    <name>E3E8H8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">50S ribosomal subunit assembly factor BipA</fullName>
            <ecNumber evidence="3">3.6.5.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">GTP-binding protein BipA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">typA</name>
        <name evidence="3" type="synonym">bipA</name>
        <name evidence="5" type="ORF">PPSC2_16720</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>GTP + H2O = GDP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="3">Binds to ribosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372111.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04055"/>
    <dbReference type="EnsemblBacteria" id="ADO57527">
        <property type="protein sequence ID" value="ADO57527"/>
        <property type="gene ID" value="PPSC2_16720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3567"/>
    <dbReference type="eggNOG" id="COG1217">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017016_4_0_9"/>
    <dbReference type="OMA" id="MSMLFTI"/>
    <dbReference type="OrthoDB" id="143460at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="entry name" value="EFTu-like_2"/>
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        <property type="entry name" value="Small_GTP-bd_dom"/>
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        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
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        <property type="entry name" value="TypA/BipA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006298">
        <property type="entry name" value="TypA_GTP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908:SF8">
        <property type="entry name" value="PTHR42908:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14492">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
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        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="TypA_BipA"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="G_TR_1"/>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="3" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Tr-type G" evidence="4">
        <location>
            <begin position="5"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="17"/>
            <end position="22"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="130"/>
            <end position="133"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="613" mass="68351" checksum="2116B7264C57F789" modified="2011-01-11" version="1">MHARENIRNIAIIAHVDHGKTTLVDKLLQQSGTFREHEAVQERAMDSNDLERERGITILAKNTAITYKDYLINIVDTPGHADFGGEVERIMKMVDGVLLVVDAYEGCMPQTKFVLRKALEQNLTPIVVVNKIDRPAARPAEVIDEVLDLFIELGANDEQLEFPVVYASALNGTSSMDAEKQDDNMQALYETVVEHIPAPTEKVDEPLQFLVTLMDYNEYLGRIAVGRVNRGIIKQGQAVTVIQRDGSSKSARIEKLFGFQGLKRIETDQAGAGDIVAIAGIKDINIGETIADPNHPEALPVLKIDEPTLQMTFLVNNSPFAGRDGKWVTSRKLRERLLKELETDVSLRVDETDSPDAFIVSGRGELHLGILIENMRREGYELQVSKPEVIVKEIDGKKMEPIERLLIDIPEESMGAVMESLGSRKAEMVNMINNGTGQVRLEFLIPARGLIGYTTNFLTLTRGYGVMNHAFDSYGPFVGGQVGGRHQGVLVSTENGTSTFYGMLGVEDRGILFLEPGTEIYEGMIVGEHTRDNDIVVNICKEKQLTNVRSATKDDTVKLKTPVIFSLEQALEYLNDDEYCEITPKSIRLRKKILNKGERERAEKQRKTAQANM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8U1</accession>
    <name>E3E8U1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Control of nitrate reduction</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nreA3</name>
        <name evidence="2" type="ORF">PPSC2_17990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372380.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05310"/>
    <dbReference type="EnsemblBacteria" id="ADO57800">
        <property type="protein sequence ID" value="ADO57800"/>
        <property type="gene ID" value="PPSC2_17990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3844"/>
    <dbReference type="eggNOG" id="COG2203">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_141530_1_0_9"/>
    <dbReference type="OMA" id="EPAEYQY"/>
    <dbReference type="OrthoDB" id="1501495at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13185">
        <property type="entry name" value="GAF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GAF" evidence="1">
        <location>
            <begin position="11"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="16983" checksum="BCB830E74261DE9C" modified="2011-01-11" version="1">MNNKMDYQRELERIREHFGYDFMALALVEPAEYQYVIKWKNAAGNLNDRFKRIVLQSGKGIAGVVFKTGKSVFIPSVHQYVGAENLFNYPIVQSEKLKSLGAVPLWNDARVAGVLLGGFREEQLMTEAMMRDLEALAHEGFGELNGKEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E914</accession>
    <name>E3E914_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">L-rhamnose isomerase</fullName>
            <ecNumber evidence="3">5.3.1.14</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">rhaA</name>
        <name evidence="4" type="ORF">PPSC2_24735</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>L-rhamnopyranose = L-rhamnulose</text>
            <dbReference type="Rhea" id="RHEA:23160"/>
            <dbReference type="ChEBI" id="CHEBI:17897"/>
            <dbReference type="ChEBI" id="CHEBI:62346"/>
            <dbReference type="EC" id="5.3.1.14"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="3">Binds 1 Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Carbohydrate degradation; L-rhamnose degradation; glycerone phosphate from L-rhamnose: step 1/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the rhamnose isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.14" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373754.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12230"/>
    <dbReference type="EnsemblBacteria" id="ADO59221">
        <property type="protein sequence ID" value="ADO59221"/>
        <property type="gene ID" value="PPSC2_24735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5243"/>
    <dbReference type="eggNOG" id="COG4806">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052790_0_0_9"/>
    <dbReference type="OMA" id="HKVNLHA"/>
    <dbReference type="OrthoDB" id="283831at2"/>
    <dbReference type="UniPathway" id="UPA00541">
        <property type="reaction ID" value="UER00601"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008740">
        <property type="term" value="F:L-rhamnose isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019301">
        <property type="term" value="P:rhamnose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00541">
        <property type="entry name" value="RhaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009308">
        <property type="entry name" value="Rhamnose_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06134">
        <property type="entry name" value="RhaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01748">
        <property type="entry name" value="rhaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0464">Manganese</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0684">Rhamnose metabolism</keyword>
    <feature type="binding site" evidence="3">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="296"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="418" mass="47915" checksum="D6DA6D4E255EF6E9" modified="2011-01-11" version="1">MNEAIEASYNEAKKLYARHGIQVDDVLRKLSQIKISLHCWQGDDVQGFLFKDKQLSGGIAVTGSYPGRAGTPNELRQDLEKALSLIPGKHKVNLHAIYADTTEQVDLDQLEPRHFQNWLDWAKQQELGLDFNPTLFSHPKAEDGFTLSHKDPDIRDFWITHCKKSRRIAEHFGKELGQPCVTNHWMPDGYKDTPVDRLAPRERLRDALDEIFSEEISEDYNIDAVESKLFGIGSESYVVGSHEFYMGYALTRGKSICLDSGHFHPTEVISNKLSSVLMFTDQLLLHVSRPVRWDSDHVVTMDDELLDIARELVRGVLLSRTHIGLDFFDGSINHVAAWVIGTRNTIKALLRAMLEPIEELKKAEEERDFTTRLALVEEFKSYPFGAVWDYYCAQNGVPVREEWLTEAKNYEQQVLLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E936</accession>
    <name>E3E936_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-ketoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373776.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12325"/>
    <dbReference type="EnsemblBacteria" id="ADO59243">
        <property type="protein sequence ID" value="ADO59243"/>
        <property type="gene ID" value="PPSC2_24835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5264"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_3_9"/>
    <dbReference type="OMA" id="NFPYFVA"/>
    <dbReference type="OrthoDB" id="1821409at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="26408" checksum="F4832A688CAB1FC9" modified="2011-01-11" version="1">MKHLDGKIAIITGSSRGIGRAIAEQLADLGAAVVVNYANSPDRAKEVVAGIIQKGGKAIALHADLGKMSDIEALFTNTIAEFGKVDILVNNAGLMITKPLAEVTEADFDQQFALNVKGTFFACQQAMKYMENYGRIVNLSTSVIGQMFPAYSVYAGTKGAVEQFTRQLAKEFGSRQITINAVAPGPVNTELFQAGKTEQQIEGMKKMNAMGRLGEPEDIADVIEFLVSAKSQWVTGQTIRVNGGFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E960</accession>
    <name>E3E960_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bacitracin ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bceA</name>
        <name evidence="5" type="ORF">PPSC2_24940</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373800.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12435"/>
    <dbReference type="EnsemblBacteria" id="ADO59267">
        <property type="protein sequence ID" value="ADO59267"/>
        <property type="gene ID" value="PPSC2_24940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5285"/>
    <dbReference type="eggNOG" id="COG1136">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="WKEYGDQ"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="28418" checksum="B615F67EF19D3934" modified="2011-01-11" version="1">MNILEAHKIHKSYGNKLNMQEVLKGIDIVIEEGEFVSIMGASGSGKTTLLNVLSSIDKVSHGSIKINDIEMTKMKEKQLAEFRKKHLGFIFQEYNLLDTLTVKENILLPLSITKTPKKEANRRFQEVATELGIYELKDKYPNEISGGQKQRTSAARAFIHEPTIIFADEPTGALDSKSASDLLNKLGQLNQKRKATIIMVTHDPVAASHCSRVIFIKDGQMYTQLHKGVQERQSFFQDIMKTQAVLGGVQHEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J4</accession>
    <name>E3E9J4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yebA3</name>
        <name evidence="4" type="ORF">PPSC2_17155</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372206.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04490"/>
    <dbReference type="EnsemblBacteria" id="ADO57625">
        <property type="protein sequence ID" value="ADO57625"/>
        <property type="gene ID" value="PPSC2_17155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3664"/>
    <dbReference type="eggNOG" id="COG1305">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021791_1_0_9"/>
    <dbReference type="OMA" id="RSYWRGE"/>
    <dbReference type="OrthoDB" id="1290857at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025403">
        <property type="entry name" value="DUF4129"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13559">
        <property type="entry name" value="DUF4129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="67"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="107"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="157"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="194"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="606"/>
            <end position="627"/>
        </location>
    </feature>
    <feature type="domain" description="TGc" evidence="3">
        <location>
            <begin position="480"/>
            <end position="562"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="574"/>
            <end position="598"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="575"/>
            <end position="589"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="748" mass="85619" checksum="FE473AD20A6C3FE2" modified="2011-01-11" version="1">MKTWLQSLKSSWALAFTFLWIIIIAMQWVSFASELWLEETRALVLTTITMLALVKILLPFRPWIEFVVKAVTLFFILYRTLVSYSIIIPFGGVANRLDQFISNMSPYVWFSLIAWLVIEMVPLIVTTKQRILVFVGINIAALAVLDSFTPTVLWEEVAWIVFAGMGWLVTQHLQYFRQHYPQGWKHIRRYPYKIASNIAVIFALIIMAGVNMPEVQPALTDPYTAWTQRISSTTAGTTNGSGALNQRMNTASGYSRQDNRLGGGFNFDYSPVMTITTNQRSYWRGETKRIYSGTGWSDGGNDDLTPNEVTMTAKLENTQETRHSTEQVVQTVTMQNDQSYPVLFGAYSVHRVQSVDRDSRANGLRWNPEQAELLWNPSSRRTAYPKTYTLVSHVPVIPEKELRTKSFNELYGKSKQEAYLQIPDELPQRVRDLARNVTSTAKTPYEKVGLLQQYLQQNYAYTNNPDLSRKRSRDFVDAFLFEIREGYCDYYSTSLVMMARSVGVPARWVKGYAPGQQTFSDDATTGDGDESMSSYSVTNADAHSWAEVYLGEYGWVPVEATPGFDMPLLTEQEDTKTPDASEVKDQPEPEQPEQAPQMAPGEGFKIHPVIIGSAVAILLLWVAYIIWRNRADIHFYLLRLRTGKPLTPDEKVVVETEHWLRYMRRKGFVRASHETLRESVDRWSQEAPERAVILHQLLGRFEQARYSPSAVTAEDWRSVRQQASLLQKGPWMKRWAGRRAKSDQKDEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9L8</accession>
    <name>E3E9L8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57650.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3695"/>
    <dbReference type="EnsemblBacteria" id="ADO57650">
        <property type="protein sequence ID" value="ADO57650"/>
        <property type="gene ID" value="PPSC2_17255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3688"/>
    <dbReference type="HOGENOM" id="CLU_2130989_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57650.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="13368" checksum="AF85883E2195ED7F" modified="2015-05-27" version="2">MLKYLVDELMDNKIDIHLYHFGMYLLYPYASRKQEDAEAVGKKRSEFISHLPRFELKSNDEFVSEVWSDLILRRYPEVGEEIVTVPSFSQLRILFTADNFGITPEHIIRMRIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9P1</accession>
    <name>E3E9P1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372411.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57831">
        <property type="protein sequence ID" value="ADO57831"/>
        <property type="gene ID" value="PPSC2_18130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3873"/>
    <dbReference type="eggNOG" id="ENOG5033DIK">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_139135_0_0_9"/>
    <dbReference type="OMA" id="FRNEFYR"/>
    <dbReference type="OrthoDB" id="1966095at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011024">
        <property type="entry name" value="G_crystallin-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49695">
        <property type="entry name" value="SSF49695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="14140" checksum="951E42896DC3D3E5" modified="2011-01-11" version="1">MDNKAYVSQTYPRLTVYNEENFRGSRRVFRGNLGIRNTDNILDGIESLRFFSTSSNATLVLFTGTRFRGNFRVYRGNRSIADLDDLIRGNDVESIISTNQRLTLQQIRNIRSTGRLPAGYRVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z5</accession>
    <name>E3E9Z5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR11</name>
        <name evidence="6" type="ORF">PPSC2_19550</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372700.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06770"/>
    <dbReference type="EnsemblBacteria" id="ADO58128">
        <property type="protein sequence ID" value="ADO58128"/>
        <property type="gene ID" value="PPSC2_19550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4168"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_2_9"/>
    <dbReference type="OMA" id="PCIGVDI"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="346" mass="38781" checksum="47629E6D81E351B9" modified="2011-01-11" version="1">MNIKTIASMAGVSVATVSKIINNYTDISEETRQRVLKIMEETGYRPSSSAKTLATKKSNLVGVIFAGKLNVDFSHPFFVDIINVFKKQIGLLGYDLLFFSNEKFLDYGEDYLARSKYFSVDGCIIIAGDEVEKSVFDLDASPIPCIGVDIELTGASSCYIMSDNQKISMKVVEHFYMNGYREMGFIGIERPSLVIKEREEAFIASLKRFSLDFRPEWIVYGKDYAAEDGYQIAKAWIQQGDLPRAVFAATDLLALGAIRAFKESGLRVPEDIAVVGCDDIEACRYTDPPLTTVKQDKQKIGRLAAMVLFDLMNKQMDTKCIKVEPELVIRTSCGARQNWNHTRIKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA78</accession>
    <name>E3EA78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372939.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07890"/>
    <dbReference type="EnsemblBacteria" id="ADO58370">
        <property type="protein sequence ID" value="ADO58370"/>
        <property type="gene ID" value="PPSC2_20640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4403"/>
    <dbReference type="eggNOG" id="COG1655">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074582_0_0_9"/>
    <dbReference type="OMA" id="WVKREIP"/>
    <dbReference type="OrthoDB" id="606787at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018708">
        <property type="entry name" value="DUF2225"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09986">
        <property type="entry name" value="DUF2225"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="174"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="28548" checksum="7E5970FA06430E96" modified="2011-01-11" version="1">MERVVKTLELEPLYQIKIVCPQCEQEFQTSRVRPSLKKAIRTDSDFCAYYKNENPDFYVVRVCPHCGFTSTEHSTVQLSDQQTKLFKDKIGNRWQPREYGGHRSWEEALETYKLGLLCAQVIGEKERVVASLLQHIAWMYRYQGNEEQELRFLKFSLDSYVRVYELEGVGANNAKLLYLIGELHRRTGNFNEAVRWFSRVINDKKIMDAAMIRASREQWSVLREQMLAKNFQLPEEMQNASSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAB1</accession>
    <name>E3EAB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">emrA</name>
        <name evidence="3" type="ORF">PPSC2_21475</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373097.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08670"/>
    <dbReference type="EnsemblBacteria" id="ADO58529">
        <property type="protein sequence ID" value="ADO58529"/>
        <property type="gene ID" value="PPSC2_21475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4566"/>
    <dbReference type="eggNOG" id="COG1566">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_11_0_9"/>
    <dbReference type="OMA" id="YNQSANY"/>
    <dbReference type="OrthoDB" id="1680841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="2">
        <location>
            <begin position="81"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="211" mass="21782" checksum="3D79348158A2BF3F" modified="2011-01-11" version="1">MNSRAILVNLLVIIIILAGGGAAAYYYNQSANYIKTDNAQVSGQAVTVASPSGGKLTGWNAEVGKTYTAGSSLGSVEGGGSRISVTIPTDGTIVQQTAVNNSVVGAGTPLAKAFDLNNLWITANIDETAVQDLQVGQTVDVYIDAYPDTSLTGKLEKIGLATASTFSLLPTSNTTANYTKVTQVVPVNISIQGYKGLGIIPGMSATIRVHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAD2</accession>
    <name>E3EAD2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome d ubiquinol oxidase subunit 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cydB</name>
        <name evidence="8" type="ORF">PPSC2_21575</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58550.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08770"/>
    <dbReference type="EnsemblBacteria" id="ADO58550">
        <property type="protein sequence ID" value="ADO58550"/>
        <property type="gene ID" value="PPSC2_21575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4587"/>
    <dbReference type="eggNOG" id="COG1294">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049294_0_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003317">
        <property type="entry name" value="Cyt-d_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43141">
        <property type="entry name" value="PTHR43141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02322">
        <property type="entry name" value="Cyt_bd_oxida_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000267">
        <property type="entry name" value="Cyt_oxidse_sub2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00203">
        <property type="entry name" value="cydB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="16"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="91"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="129"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="204"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="237"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="263"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="308"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58550.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="347" mass="39074" checksum="BFB68E04A2861DD1" modified="2015-05-27" version="2">MIHLLKEVTALSLNDLWFLLIAVLFTGFFFLEGFDFGVGMATGLVPRNDQQKRLMINTIGPFWDANEVWLITAAGAMFAAFPHFYATMFSGYYLVFVFILLGLILRGVSFEFRGKAEGKGWTGTWDTCILIGSFLPPMLFGMAFAALVKGVPIQQNMDLKAGFLDVFNGYTVWIGLTVVGMCLMHGLTFISLRTIGEVRDRARVIASKFLPVLGILLAGMVVWTYFATDLFVRRGPFMYVAVAVGILAYVLTWYFLRQRREGWAFGMTGVIILLSFVSLFVGLFPRFMVSSINSAFDLTIYNASSSHYTLKAMTIVAATLLPFVLAYQAWSYFVFHKRLSEKDHLEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAK7</accession>
    <name>E3EAK7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">dTDP-4-dehydrorhamnose reductase</fullName>
            <ecNumber evidence="2">1.1.1.133</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rfbD</name>
        <name evidence="4" type="ORF">PPSC2_22660</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>dTDP-beta-L-rhamnose + NADP(+) = dTDP-4-dehydro-beta-L-rhamnose + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:21796"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57510"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="1.1.1.133"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the dTDP-4-dehydrorhamnose reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.133" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373304.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4823"/>
    <dbReference type="EnsemblBacteria" id="ADO58765">
        <property type="protein sequence ID" value="ADO58765"/>
        <property type="gene ID" value="PPSC2_22660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4799"/>
    <dbReference type="eggNOG" id="COG1091">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045518_1_2_9"/>
    <dbReference type="OMA" id="AGETTWH"/>
    <dbReference type="OrthoDB" id="1076083at2"/>
    <dbReference type="UniPathway" id="UPA00124"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008831">
        <property type="term" value="F:dTDP-4-dehydrorhamnose reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019305">
        <property type="term" value="P:dTDP-rhamnose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005913">
        <property type="entry name" value="dTDP_dehydrorham_reduct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029903">
        <property type="entry name" value="RmlD-like-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10491">
        <property type="entry name" value="PTHR10491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04321">
        <property type="entry name" value="RmlD_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01214">
        <property type="entry name" value="rmlD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RmlD_sub_bind" evidence="3">
        <location>
            <begin position="1"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU364082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="32469" checksum="C00DB8EF507309C4" modified="2011-01-11" version="1">MRILVTGASGQLGKDVVNVFQGQGHDVWGYDREQLDITDLEQVVKIVGQYQPNAIIHCAAYTAVDAAESDIDTAYQVNATGTRNMALAAEKTGAKLVYISTDYVFDGTAEGLYHEYDNTNPQSIYGKSKRAGEVLTQTLSSRYFIVRTSWVYGLHGNNFVKTMLKLGQEKPNLQVVNDQKGSPTYTVDLARFLAELIQTEKYGIYHASNSGSCTWYEFTQAILQDAAELFAVKITANVEPCSTEQFPRPAARPRNSVLEHIAIRSNGFHVLQDWRKGLRDFLQEYFNKSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAX2</accession>
    <name>E3EAX2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373571.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11420"/>
    <dbReference type="EnsemblBacteria" id="ADO59036">
        <property type="protein sequence ID" value="ADO59036"/>
        <property type="gene ID" value="PPSC2_23915"/>
    </dbReference>
    <dbReference type="GeneID" id="66575289"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5060"/>
    <dbReference type="eggNOG" id="ENOG50334JE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_141474_0_0_9"/>
    <dbReference type="OMA" id="TQWAITN"/>
    <dbReference type="OrthoDB" id="1656489at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="13227" checksum="97749F297E83B2EF" modified="2011-01-11" version="1">MTLLDSNESKKRMCQIYNEVSKELFGFGTTLLRATVENNIVTFVAKHRRSPRSAALEVEAPGLKLEVDFRMSMLYKKRLREKLIEDMELDIEALLRDYDSATQWAITNIILKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB04</accession>
    <name>E3EB04_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CDP-diglyceride synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cdsA3</name>
        <name evidence="2" type="ORF">PPSC2_25015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373817.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12510"/>
    <dbReference type="EnsemblBacteria" id="ADO59284">
        <property type="protein sequence ID" value="ADO59284"/>
        <property type="gene ID" value="PPSC2_25015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5301"/>
    <dbReference type="eggNOG" id="COG4589">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037294_3_0_9"/>
    <dbReference type="OMA" id="QYVWGKL"/>
    <dbReference type="OrthoDB" id="1533756at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="5"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="208"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="240"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="304" mass="35035" checksum="38B2D54342F79E7A" modified="2011-01-11" version="1">MDSSLLTLTLICIALLIIHLIYIVVVKTQPNKDYAAIGLRIKTWWGMFFIFCLATLFNPIVSLLSLMVLTFFALKEYFSMIRSRKADRRLFLWAYLAIPVQFYWIYIGWYGMFIVFIPIYVFLLLPLPRLINKGTVGFLRSVSSTQWGLMLMVFGLSHLAYFQFAAPQYGAKLVLFLVVLTQLNDVAHYLASLYFGKRKIVPTSNPNITWEGFAFAFPVTIAASYLIYPYLTPFDLKFGIIFGMLISLSGFFGSLTVSVLKRDLLIGDDNKFDALKKSYLSRVDSLTYTSPVFFHVIRYFFDFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB81</accession>
    <name>E3EB81_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yxdK</name>
        <name evidence="10" type="ORF">PPSC2_20845</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372982.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08090"/>
    <dbReference type="EnsemblBacteria" id="ADO58413">
        <property type="protein sequence ID" value="ADO58413"/>
        <property type="gene ID" value="PPSC2_20845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4445"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_13_1_9"/>
    <dbReference type="OMA" id="LNHEVEI"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="121"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="38503" checksum="CD01E1446051BC8C" modified="2011-01-11" version="1">MKLFWRDHFSMIIFNIIQLFLVLSIYWMDGYRNLSTALYSVFFGFILLLVYLLFRYVMYSGLYRILSTANIRDLDELIQMKVLNPLASSLQHLLLQFYQLYQSRIHQLEHQQRDHITFINQWVHQMKTPLAVIHLILKGKIDPESDQIHDEIDRMGKGLDMILYMSRLESFEPDFHVEPVVLRKLVSEVIYDNKRLLIRNEIYPSNEVDEQLNVITDAKWLRFIINQLVTNAIKYSSGYAHSLKLISDVRDHVIVLKVQDEGIGIPKKDIERVFEAYYTGENGRKYSESTGMGLYLVAEICKRLNHDIQLTSTVGEGTTVEILFPIHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBP1</accession>
    <name>E3EBP1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Amidophosphoribosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">comF</name>
        <name evidence="1" type="ORF">PPSC2_23080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373397.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10565"/>
    <dbReference type="EnsemblBacteria" id="ADO58859">
        <property type="protein sequence ID" value="ADO58859"/>
        <property type="gene ID" value="PPSC2_23080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4889"/>
    <dbReference type="eggNOG" id="COG1040">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054549_0_0_9"/>
    <dbReference type="OMA" id="REWIGQF"/>
    <dbReference type="OrthoDB" id="1937725at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="21547" checksum="034A215F504482CB" modified="2011-01-11" version="1">MVREWIGQFKYRGNEKFGPLLGEIMNRAYQAMRHEFAGHDCNRFKRSLWDVDIVTCVPVSEKRLTERGFNQAEILAEEIAKRNKLPFLPLLVRPQDTGKQSFKSKNERMNTMNNAFSVIPNMVNLVNSFILKAGSQRATEHRHSVTILLVDDIYTTGSTLQACARVLREMALEQGVHLAIFCLTFARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBS7</accession>
    <name>E3EBS7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">ATP synthase subunit beta</fullName>
            <ecNumber evidence="10">7.1.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">ATP synthase F1 sector subunit beta</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">F-ATPase subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">atpD</name>
        <name evidence="12" type="ORF">PPSC2_23245</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + 4 H(+)(in) + H2O = ADP + 5 H(+)(out) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:57720"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="7.1.2.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="10">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <dbReference type="EC" id="7.1.2.2" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373432.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10735"/>
    <dbReference type="EnsemblBacteria" id="ADO58895">
        <property type="protein sequence ID" value="ADO58895"/>
        <property type="gene ID" value="PPSC2_23245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4922"/>
    <dbReference type="eggNOG" id="COG0055">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022398_0_2_9"/>
    <dbReference type="OMA" id="GFNMIMD"/>
    <dbReference type="OrthoDB" id="430176at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01347">
        <property type="entry name" value="ATP_synth_beta_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005722">
        <property type="entry name" value="ATP_synth_F1_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020003">
        <property type="entry name" value="ATPase_a/bsu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036121">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024034">
        <property type="entry name" value="ATPase_F1/V1_b/a_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50615">
        <property type="entry name" value="SSF50615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01039">
        <property type="entry name" value="atpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00152">
        <property type="entry name" value="ATPASE_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="4 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0139">CF(1)</keyword>
    <keyword evidence="10" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 10" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AAA" evidence="11">
        <location>
            <begin position="147"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="155"/>
            <end position="162"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="50421" checksum="5D5AADD2DD1FF8AE" modified="2011-01-11" version="1">MNKGRVVSIMGPVVDVEFERGQLPEILNAIHIGTVLESGVKIDLTLEASKHLGDNRVRCIAMSSTDGLVRGAEAIDLGAPISVPVGEATLGRVFNVLGTPIDNGADMSEAARNPIHRQAPSFEELTTQAEMLETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMRDSGVINKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKISEMGIYPAVDPLASSSRILSPDVVGEEHYNVAQGVKQILARYNELQDIIAILGMDELSEEDKMLVARARKIQRFLSQPFHVAEAFNGFPGKYVPVKETVRSFKEILEGKHDNLPEAAFLFVGAIEEAVEKAKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBS8</accession>
    <name>E3EBS8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">ATP synthase gamma chain</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ATP synthase F1 sector gamma subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">F-ATPase gamma subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">atpG</name>
        <name evidence="10" type="ORF">PPSC2_23250</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the ATPase gamma chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373433.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10740"/>
    <dbReference type="EnsemblBacteria" id="ADO58896">
        <property type="protein sequence ID" value="ADO58896"/>
        <property type="gene ID" value="PPSC2_23250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4923"/>
    <dbReference type="eggNOG" id="COG0224">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050669_0_1_9"/>
    <dbReference type="OMA" id="MQITSAM"/>
    <dbReference type="OrthoDB" id="1701531at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042777">
        <property type="term" value="P:proton motive force-driven plasma membrane ATP synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd12151">
        <property type="entry name" value="F1-ATPase_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00815">
        <property type="entry name" value="ATP_synth_gamma_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035968">
        <property type="entry name" value="ATP_synth_F1_ATPase_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000131">
        <property type="entry name" value="ATP_synth_F1_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023632">
        <property type="entry name" value="ATP_synth_F1_gsu_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11693">
        <property type="entry name" value="PTHR11693"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00231">
        <property type="entry name" value="ATP-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00126">
        <property type="entry name" value="ATPASEGAMMA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52943">
        <property type="entry name" value="SSF52943"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01146">
        <property type="entry name" value="ATPsyn_F1gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00153">
        <property type="entry name" value="ATPASE_GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0139">CF(1)</keyword>
    <keyword evidence="4 9" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="31792" checksum="7D1416F1D22BA308" modified="2011-01-11" version="1">MAKGMRDIKRQIKSVQSSKQITKAMEMVAASKLRRAQEKAESARPYSEKLKEVVSSIASGANNIKHPMLESRPVKKTAYLIITSDRGLAGGYNANILRQVTQTIAERHRSQDEFVIFIIGRKGRDYFRRREFPIAESVTDLSDTPAFSDIKTIASKAVQGFELKEFDELYLCYNRFVNALTQIPTVDRLLPMATPDSATASSSINYEYEPSPEGVLEVLLPRYAETLIYGALLDGKASELGAKMTAMGAATKNATKLIGELSLTYNRARQAAITQEITEIVAGANAQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW1</accession>
    <name>E3EBW1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Quinone oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhfP</name>
        <name evidence="2" type="ORF">PPSC2_24125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373620.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11630"/>
    <dbReference type="EnsemblBacteria" id="ADO59085">
        <property type="protein sequence ID" value="ADO59085"/>
        <property type="gene ID" value="PPSC2_24125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5108"/>
    <dbReference type="eggNOG" id="COG0604">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026673_26_3_9"/>
    <dbReference type="OMA" id="AQMDYNS"/>
    <dbReference type="OrthoDB" id="884088at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014188">
        <property type="entry name" value="Acrylyl-CoA_reductase_AcuI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43677:SF1">
        <property type="entry name" value="PTHR43677:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02823">
        <property type="entry name" value="oxido_YhdH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="16"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="35459" checksum="A16C8A51F3BC0CA3" modified="2011-01-11" version="1">MTQSFQALVVDQTQDGEVQAEVRSLKTDSLPAGEVLIRVAYSSINYKDGLAARKDGNIVKSYPFVPGIDCSGTVVSSEDSRFSEGQAVLVTGYGLGVSHFGGFSQYARVPADWVVPLSDGLTLREAMIFGTAGFTAALSLYRLEQNDVAPEKGKVLVTGATGGVGGAAIALLHKKGYHVVASSGKADSHDYLRALGAADVISREEVYDGAESIRPLAKQLWQAAVDPVGGKPLASLLSQIAYNGSVAVSGLTAGTKLPTTVLPFILRGVNLLGIDSVFCPYDTRVAIWKHLGSDWKPKQLEQLVEREIGLGDLPSALEDILAARSQGRTIVRLAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBZ7</accession>
    <name>E3EBZ7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Peptidase T</fullName>
            <ecNumber evidence="7">3.4.11.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Aminotripeptidase</fullName>
            <shortName evidence="7">Tripeptidase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Tripeptide aminopeptidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">pepT</name>
        <name evidence="11" type="ORF">PPSC2_24290</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Cleaves the N-terminal amino acid of tripeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>Release of the N-terminal residue from a tripeptide.</text>
            <dbReference type="EC" id="3.4.11.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7 9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7 9">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the peptidase M20B family.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.4" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373656.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11810"/>
    <dbReference type="MEROPS" id="M20.003"/>
    <dbReference type="EnsemblBacteria" id="ADO59121">
        <property type="protein sequence ID" value="ADO59121"/>
        <property type="gene ID" value="PPSC2_24290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5143"/>
    <dbReference type="eggNOG" id="COG2195">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053676_0_0_9"/>
    <dbReference type="OMA" id="GHNFHGK"/>
    <dbReference type="OrthoDB" id="1015417at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045148">
        <property type="term" value="F:tripeptide aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043171">
        <property type="term" value="P:peptide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00550">
        <property type="entry name" value="Aminopeptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001261">
        <property type="entry name" value="ArgE/DapE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010161">
        <property type="entry name" value="Peptidase_M20B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42994:SF1">
        <property type="entry name" value="PTHR42994:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037215">
        <property type="entry name" value="Peptidase_M20B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01882">
        <property type="entry name" value="peptidase-T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00758">
        <property type="entry name" value="ARGE_DAPE_CPG2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00759">
        <property type="entry name" value="ARGE_DAPE_CPG2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7 11" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 7" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4 7" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="M20_dimer" evidence="10">
        <location>
            <begin position="209"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="active site" evidence="7 8">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7 8">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="381"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR037215-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR037215-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="45332" checksum="086386DF735D16DE" modified="2011-01-11" version="1">MKQELIDRLTTYVQVDTQSDESSHTCPTTPGQLTLGNLLVDELKAIGMTDVTIDDHGYVMATLPSNTDKEVPVIGFLAHLDTATELTGAGVKPQLTENYDGGDITLNASLGVVLSPREFPELTQYKGHTLITTDGTTLLGADNKAGIAEIMTAIHYLIDHPEIQHGKIRVAFTPDEEIGRGPERFDVAAFGAEYAYTVDGGPLGELEYESFNAAAAHITIHGVNVHPGTAKNKMIHAAKIAMELHSRLPVNEAPEYTDGYDGFYHLLESTGTAEQAKLYYIIRDFDRESFENRKAYLTNIVKELQAAYGDNRITLELRDQYYNMKEKIEPVKHIVDIAHEAMTKLNIEPIIKPIRGGTDGSQLSYMGLPTPNIFTGGENYHGKYEYVSVDNMVLATKVIVGIAQLFEQRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC01</accession>
    <name>E3EC01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">6-phospho 3-hexuloisomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hxlB</name>
        <name evidence="3" type="ORF">PPSC2_24310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIS family. PHI subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373659.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11830"/>
    <dbReference type="EnsemblBacteria" id="ADO59125">
        <property type="protein sequence ID" value="ADO59125"/>
        <property type="gene ID" value="PPSC2_24310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5147"/>
    <dbReference type="eggNOG" id="COG0794">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094236_1_1_9"/>
    <dbReference type="OMA" id="KTIQPMG"/>
    <dbReference type="OrthoDB" id="1425559at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05005">
        <property type="entry name" value="SIS_PHI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017552">
        <property type="entry name" value="PHI/rmpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43443">
        <property type="entry name" value="PTHR43443"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03127">
        <property type="entry name" value="RuMP_HxlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="29"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="19834" checksum="2E7EA48C5442D045" modified="2011-01-11" version="1">METSQYLSEVIKELQFVPQLISDTESEQLIHSIAAANKVFVAGAGRSGFMIRSLAMRLMHMGVQAYVVGETVTPGLSEGDLLIIGSGSGETKSLVSMADKAKKLGASLAVLTTSPESTIGKLADIIVKLPGAPKDPSSKDYQTIQPMGSLFEQTLLLYGDALVLRTMQLRKLTSESMYGQHANLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC41</accession>
    <name>E3EC41_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yyaC3</name>
        <name evidence="1" type="ORF">PPSC2_25465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373911.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12960"/>
    <dbReference type="EnsemblBacteria" id="ADO59381">
        <property type="protein sequence ID" value="ADO59381"/>
        <property type="gene ID" value="PPSC2_25465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5396"/>
    <dbReference type="eggNOG" id="ENOG50313RY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_104063_1_0_9"/>
    <dbReference type="OMA" id="PVHAVNM"/>
    <dbReference type="OrthoDB" id="1455540at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009665">
        <property type="entry name" value="DUF1256"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023430">
        <property type="entry name" value="Pept_HybD-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06866">
        <property type="entry name" value="DUF1256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53163">
        <property type="entry name" value="SSF53163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02841">
        <property type="entry name" value="spore_YyaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="201" mass="22033" checksum="F3598889310045E5" modified="2011-01-11" version="1">MTYPSDFIPGQEPLSLKISHTDPGIQSAIIHRLLFHLHQARSLQNIVIICIGTDRSTGDCLGPLVGTHLSRYKSPLFSLYGTLDEPVHAMNLQTTLNGIHDRYEQPYIIGIDACLGQTSSVGCIQVAEGPLKPGAGVNKELPPVGDIHLTGIVNVGGFMEYFVLQNTRLNLVMKLSDIIASSLYSAIREWHYRSVLLAAQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECD5</accession>
    <name>E3ECD5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-431</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-431</name>
        <name evidence="1" type="ORF">PPSC2_01455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368920.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0293"/>
    <dbReference type="EnsemblBacteria" id="ADO54278">
        <property type="protein sequence ID" value="ADO54278"/>
        <property type="gene ID" value="PPSC2_01455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.288"/>
    <dbReference type="eggNOG" id="COG4283">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_124046_0_0_9"/>
    <dbReference type="OMA" id="KWTLGRM"/>
    <dbReference type="OrthoDB" id="1368382at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012550">
        <property type="entry name" value="DUF1706"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40658">
        <property type="entry name" value="PTHR40658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08020">
        <property type="entry name" value="DUF1706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031551">
        <property type="entry name" value="DUF1706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="20817" checksum="23EFED4117316175" modified="2011-01-11" version="1">MSSYEYASKSELKEAIHTSYLRFDSEFQEIDESHKDTRIDEVDKTPAEMIAYQLGWLHLVMSWDRDEQEGKTVIMPAPNYKWNRLGELYQSFYKTYSDHSLYELRNMLKLAEQTWLNWVDTLSHEELFTQGVHKWTGTNPNWPMARWIHINSVAPFKTFRAKIRKWKKYNAQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECG6</accession>
    <name>E3ECG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_01595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54309.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599394.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14360"/>
    <dbReference type="EnsemblBacteria" id="ADO54309">
        <property type="protein sequence ID" value="ADO54309"/>
        <property type="gene ID" value="PPSC2_01595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.319"/>
    <dbReference type="eggNOG" id="COG0454">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_13_3_9"/>
    <dbReference type="OrthoDB" id="1972497at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="15"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54309.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="20679" checksum="3A2F3BC78C3F3E8C" modified="2015-05-27" version="2">MTSMTIVDPSVKPGLTAFQASAEDQAEVHELILKTARWLHSKGSTQWGKLLKGEDDHNLGGAIARGEVVIFRTSEDHRLAGAVILQQQPSAWDSRLWGLEETDSEEGTSVYLHRLVVDRDNSGKGLGRELMQWIEQGIRFAGKDRIRLDCIAGNDKLSGFYKQCGYTYMGETNGYNTFEKMLIKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECH7</accession>
    <name>E3ECH7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glyoxal reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ytbE</name>
        <name evidence="5" type="ORF">PPSC2_01645</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54320.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040102349.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14415"/>
    <dbReference type="EnsemblBacteria" id="ADO54320">
        <property type="protein sequence ID" value="ADO54320"/>
        <property type="gene ID" value="PPSC2_01645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.329"/>
    <dbReference type="eggNOG" id="COG0656">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_0_1_9"/>
    <dbReference type="OrthoDB" id="1035565at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd19157">
        <property type="entry name" value="AKR_AKR5G1-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044500">
        <property type="entry name" value="AKR5G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018170">
        <property type="entry name" value="Aldo/ket_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43827">
        <property type="entry name" value="PTHR43827"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000097">
        <property type="entry name" value="AKR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00798">
        <property type="entry name" value="ALDOKETO_REDUCTASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00062">
        <property type="entry name" value="ALDOKETO_REDUCTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00063">
        <property type="entry name" value="ALDOKETO_REDUCTASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="4">
        <location>
            <begin position="31"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Lowers pKa of active site Tyr" evidence="3">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54320.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="31915" checksum="C4C4747C76290C73" modified="2015-05-27" version="2">MIQNLQSTTTLHNGVRMPWFGIGVFKVEEGSELVNAVKAAVKHGYRSIDTAAIYANENSVGQAIQEALLENNLSREDLFVTSKVWNADLGYEETRAAYEASLDKLGLDYLDLYLIHWPVQGKYKEAWRALESLYKEGRIKAIGVSNFQIHHLEDLMKDAEIKPMVNQVEFHPQLTQAELLQFCQKNNIQMEAWSPLMQGQLLDHPVLQDIANKYGKSVAQVILRWDVQQGVVTIPKSTKAHRIVENADIFDFELTREDMDRIQSLNANLRVGPDPDNFDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECQ8</accession>
    <name>E3ECQ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-504</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-504</name>
        <name evidence="2" type="ORF">PPSC2_01795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368992.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0368"/>
    <dbReference type="EnsemblBacteria" id="ADO54352">
        <property type="protein sequence ID" value="ADO54352"/>
        <property type="gene ID" value="PPSC2_01795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.361"/>
    <dbReference type="eggNOG" id="ENOG5030KN5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_725301_0_0_9"/>
    <dbReference type="OMA" id="WASKWID"/>
    <dbReference type="OrthoDB" id="1918947at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="381" mass="44108" checksum="E629B975F4C81118" modified="2011-01-11" version="1">MNGIIVRFWLQLLLRREQAVTLLVSFSVVLLFNLIMNEGIAITYSVNLLFVAFFSLQIASIHNRNHTEPYIYISVFPNYRLIAYQLYVSLILSFPLLLMMVGLLWKSFADVSLWNLVIIVFFSSVFSSMLGLFLGQVVKHYGLAFTFLIAFYLPIGLVSWSFNEKLRYISPVVNIFNPYMINWRNLFGLLGCSLLFYGLGTLLSSRRGGGKKSIIPWISTVLACSILMGVWGYERLFNENVQTSSFQKITVGQTQVEYKGISSYQARQFATLFETLYQVAKKKETHPIHYTLEITRIHSMSSFEPKIIVQNHNKLQINIYSNKLLEFNFGMDWASKWIDYILPQLTHLSNEQVDAFKRLKNEIILEVREKNPENIYTIQGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED06</accession>
    <name>E3ED06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-1018</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-1018</name>
        <name evidence="2" type="ORF">PPSC2_04400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369509.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0892"/>
    <dbReference type="EnsemblBacteria" id="ADO54875">
        <property type="protein sequence ID" value="ADO54875"/>
        <property type="gene ID" value="PPSC2_04400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.879"/>
    <dbReference type="eggNOG" id="ENOG503064C">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_155215_0_0_9"/>
    <dbReference type="OMA" id="YRSLWHE"/>
    <dbReference type="OrthoDB" id="1874474at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11219" checksum="24890747C6DAA16C" modified="2011-01-11" version="1">MELENQADYSVQKRLTGAPNGNSGEALLANVSHRSVQGTSPTYRILDDTELAEDTEFAGELGEQSYRSLWHEDQNNGASCKLEWEGRVETHQMFRHSYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDB1</accession>
    <name>E3EDB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mrsE1</name>
        <name evidence="2" type="ORF">PPSC2_02480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369108.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15215"/>
    <dbReference type="EnsemblBacteria" id="ADO54468">
        <property type="protein sequence ID" value="ADO54468"/>
        <property type="gene ID" value="PPSC2_02480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.478"/>
    <dbReference type="eggNOG" id="COG4200">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086622_5_0_9"/>
    <dbReference type="OMA" id="CVMIAGR"/>
    <dbReference type="OrthoDB" id="1902621at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="25911" checksum="ADC9DBD451B8B6D3" modified="2011-01-11" version="1">MFGGYVRLLSVERLKMAKSPVWLLALVSPAIAVLVGLLANPGGNWLLLLAAMLTIHAMLFLPMLTAVFGSLVCRFEHGGGGWKQLMSLPLSRTGLYAAKLTIIMAMVGLTQLLFGGALLGVGAVQGMNGPIPWTVIAQSLLAGWVACLPLAALQLMVSFLWSSFAAPLALNFVFTVPNMLIANSQTYAPYYPWVQPLLAMMPSGGDDFGAFMVPTDTLLMVVLGSFVLFALAGLTIFRYKEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDL7</accession>
    <name>E3EDL7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">kdpD1</name>
        <name evidence="4" type="ORF">PPSC2_06480</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369956.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19445"/>
    <dbReference type="EnsemblBacteria" id="ADO55325">
        <property type="protein sequence ID" value="ADO55325"/>
        <property type="gene ID" value="PPSC2_06480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1335"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019595_0_0_9"/>
    <dbReference type="OMA" id="YHWNGSI"/>
    <dbReference type="OrthoDB" id="684949at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003852">
        <property type="entry name" value="Sig_transdc_His_kinase_KdpD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02702">
        <property type="entry name" value="KdpD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="KdpD" evidence="3">
        <location>
            <begin position="20"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="KdpD" evidence="3">
        <location>
            <begin position="411"/>
            <end position="619"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="775" mass="88078" checksum="6DC38ADD1D6BDAC5" modified="2011-01-11" version="1">MESFKRKSPEEILDSINKLHRGRLKIYIGAVSGSGKTYHMLQEGQSLQHEGIDVVICAVSTLQRRETVEQVGSLERVPSIHWMKDGEEQKDLNVEALVARNPEVVLVDHLAHHNRKDASFPTRLEDIRYLLEMGISVITTVNVYELEGITEWVYQLTGFEAEYTVPVDTLELADEIRLIDATPEMILERLAKGYMHTPNPEMFHRGNLGKLRELALRLVAEDVNDSLERHREELGLHGASGAAERILVPVQYHWNGSIYVRRGEQVAKRLGGDMLVVSFVSSKRKLSKESAAFKRSIEQLADKIGSTFEEIPLFSRRRLPRQLIHYAVTHNVTRIVMGHSRQTPWQELVKGSLVNGILKRMKNMDLLLIADRAEQEGERILPTMRQEEGDTDPYHRLSVEEVQAEEAKILRGKLKVYIGAAPGVGKTYTMLREGNDLLESGIDVVIGLLETHGRAETLAQVGSLEMISRQSIERHGAHLEEMDTEAILRRNPEVVLVDELAHTNVPGSLRSKRYEDVLAILEQGISVISTMNVQHLESLNDAVEQITGIRVRETVPDHMMRLADEVQLVDVAPKSLQQRMREGKIYAPAKVEQALSHFFKLGNLIALRELALRELADDVDERLESWDRHESLRGPWRREEVIFVGVTLSENAERLIRRGFRIAFRLKAVWIVTYVHIGERIPERLNPRLEQLKLLTHRLGGTFEIRLVSSKREIADILIAPVEGYSGTQLIVGQSSRSSCWGKTAVVPRILRQARHMDVLIVADYDPDIKLETDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDN1</accession>
    <name>E3EDN1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Probable endonuclease 4</fullName>
            <ecNumber evidence="7">3.1.21.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Endodeoxyribonuclease IV</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Endonuclease IV</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nfo</name>
        <name evidence="9" type="synonym">nfo1</name>
        <name evidence="9" type="ORF">PPSC2_06545</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>Endonucleolytic cleavage to 5'-phosphooligonucleotide end-products.</text>
            <dbReference type="EC" id="3.1.21.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 3 Zn(2+) ions.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the AP endonuclease 2 family.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.2" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369970.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19510"/>
    <dbReference type="EnsemblBacteria" id="ADO55339">
        <property type="protein sequence ID" value="ADO55339"/>
        <property type="gene ID" value="PPSC2_06545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1348"/>
    <dbReference type="eggNOG" id="COG0648">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025885_4_1_9"/>
    <dbReference type="OMA" id="HPGSHLK"/>
    <dbReference type="OrthoDB" id="1088517at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008833">
        <property type="term" value="F:deoxyribonuclease IV (phage-T4-induced) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00019">
        <property type="entry name" value="AP2Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00152">
        <property type="entry name" value="Nfo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001719">
        <property type="entry name" value="AP_endonuc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018246">
        <property type="entry name" value="AP_endonuc_F2_Zn_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21445">
        <property type="entry name" value="PTHR21445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00518">
        <property type="entry name" value="AP2Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00587">
        <property type="entry name" value="nfo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00729">
        <property type="entry name" value="AP_NUCLEASE_F2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00731">
        <property type="entry name" value="AP_NUCLEASE_F2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51432">
        <property type="entry name" value="AP_NUCLEASE_F2_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="8">
        <location>
            <begin position="20"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="179"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="227"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="259"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="375" mass="42324" checksum="C6FBAAD09A748D42" modified="2011-01-11" version="1">MLKIGSHVSFSDKGLLSATKEASSYGSSSFMIYTGAPQNTRRKPMESMYLEEGKQLMAEKGMEDIVVHAPYIINLGSYKENTYELAVSFLQEEIRRTHAIGVKNIVLHPGAFTDKDAEYGIRRIADGLNEVLNGVKETDVNIALETMAGKGTEMGRSFEEIASIIDKVERNERLTVCMDTCHIHDAGYDIVNDLDGVLEQFDRIVGLNRIQVVHINDSKNPVGAHKDRHTPIGSGWIGYQTIHNVVHHEALQGRPFILETPWIGKEAKTQRPMYEVEIALLRGNVKERFGDEFLGQVEQLHSFFKKQDVDVRKFVLDTWTLLKNDAKARKADPREPLERLYDMITEAGLFPEMSEEHINQRLIACFAGSHLPVTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDQ3</accession>
    <name>E3EDQ3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase</fullName>
            <shortName evidence="10">NN:DBI PRT</shortName>
            <ecNumber evidence="4 10">2.4.2.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9 10">N(1)-alpha-phosphoribosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 11" type="primary">cobT</name>
        <name evidence="11" type="ORF">PPSC2_06650</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>5,6-dimethylbenzimidazole + nicotinate beta-D-ribonucleotide = alpha-ribazole 5'-phosphate + H(+) + nicotinate</text>
            <dbReference type="Rhea" id="RHEA:11196"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15890"/>
            <dbReference type="ChEBI" id="CHEBI:32544"/>
            <dbReference type="ChEBI" id="CHEBI:57502"/>
            <dbReference type="ChEBI" id="CHEBI:57918"/>
            <dbReference type="EC" id="2.4.2.21"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Nucleoside biosynthesis; alpha-ribazole biosynthesis; alpha-ribazole from 5,6-dimethylbenzimidazole: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the CobT family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.21" evidence="4 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369992.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19615"/>
    <dbReference type="EnsemblBacteria" id="ADO55361">
        <property type="protein sequence ID" value="ADO55361"/>
        <property type="gene ID" value="PPSC2_06650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1369"/>
    <dbReference type="eggNOG" id="COG2038">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002982_0_0_9"/>
    <dbReference type="OMA" id="AWMRKCA"/>
    <dbReference type="OrthoDB" id="1765140at2"/>
    <dbReference type="UniPathway" id="UPA00061">
        <property type="reaction ID" value="UER00516"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008939">
        <property type="term" value="F:nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02439">
        <property type="entry name" value="DMB-PRT_CobT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1610.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00230">
        <property type="entry name" value="CobT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003200">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017846">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023195">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036087">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02277">
        <property type="entry name" value="DBI_PRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52733">
        <property type="entry name" value="SSF52733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03160">
        <property type="entry name" value="cobT_DBIPRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="7 10 11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10 11" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="356" mass="36256" checksum="4DC6672DB74114AA" modified="2011-01-11" version="1">MNDKLRQLIDSIAQPDGVAASAASAHLDQLTKPPGSLGKLESLAIQLAGITGVDKPEFDRKTVMVMAADHGVCEEGVSAFPAEVTQQMLYNMLSGGAAINVLARHAGADVQVVDVGVNADVSHPSLVNRKVRMGTSNMAKGPAMLRTEAEQAVLAGAEAVAEAVKGGTRLFVTGELGIGNTTASAAVVCALTGLEPEVIVGRGTGVDSAGLTRKIAVVCRALEVNQPDANDALDVLTKVGGLEIAALAGVILGAAAHRCPVVLDGFISGAAALAARAIAPASAAYMLASHASDERGHAAVLRQLKLEPMLHLDMRLGEGTGGALSLHLIDAACRIMREMATFADAGVSDGQGAAQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDT3</accession>
    <name>E3EDT3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-162</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-162</name>
        <name evidence="2" type="ORF">PPSC2_00065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368653.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13080"/>
    <dbReference type="EnsemblBacteria" id="ADO53999">
        <property type="protein sequence ID" value="ADO53999"/>
        <property type="gene ID" value="PPSC2_00065"/>
    </dbReference>
    <dbReference type="GeneID" id="66574951"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.11"/>
    <dbReference type="eggNOG" id="ENOG502ZTEH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1863206_0_0_9"/>
    <dbReference type="OMA" id="GWTEEPN"/>
    <dbReference type="OrthoDB" id="1717756at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168159" evidence="1">
        <location>
            <begin position="25"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO53999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="15527" checksum="5ED76A3BBC402878" modified="2011-01-11" version="1">MRRNKWLALLVLFSVAVAILTGCVEEEPSWTSFEGAANEKTFPVPKEASKTDRASSNSDMDYVRYALPALKESDSLPAPYLEEIAAWGWTEEPNLSTSNQKVFQKNKHMVHLSVHDGSFTVLVPKDRKATVKSKSVDLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDX7</accession>
    <name>E3EDX7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YabS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yabS</name>
        <name evidence="1" type="ORF">PPSC2_00270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368690.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13285"/>
    <dbReference type="EnsemblBacteria" id="ADO54043">
        <property type="protein sequence ID" value="ADO54043"/>
        <property type="gene ID" value="PPSC2_00270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.53"/>
    <dbReference type="eggNOG" id="COG2304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1159192_0_0_9"/>
    <dbReference type="OMA" id="QMMTRKT"/>
    <dbReference type="OrthoDB" id="1426508at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="26778" checksum="E6194EEFF0A87A14" modified="2011-01-11" version="1">MKQILIITDGCSNVGVSPVMAAAQALREGITVNVAGVIDYGTIGELGSAEIQEIAKAGGGFSQIVGTKQLAQTMQMMTRKTVVQTIQQAVNRELTHILGEGGARHIGELPPAKRAQVVEVMDELTETSPLEIALLIDASASMKPKLPAVEDSIRDLLLSLQSRSGLSRISVFHFPGGRMGEDAVMDIGWTSELDQIKSIFGRLRMKGATPTGPAILQVIDYYRYVTLGEQKDLEESYSKGEGMLGDYVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDZ9</accession>
    <name>E3EDZ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ccdC3</name>
        <name evidence="2" type="ORF">PPSC2_02620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369119.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15385"/>
    <dbReference type="EnsemblBacteria" id="ADO54479">
        <property type="protein sequence ID" value="ADO54479"/>
        <property type="gene ID" value="PPSC2_02620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.488"/>
    <dbReference type="eggNOG" id="COG4846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112887_0_0_9"/>
    <dbReference type="OMA" id="MFWILAF"/>
    <dbReference type="OrthoDB" id="1851222at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031306">
        <property type="entry name" value="CcdC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39164">
        <property type="entry name" value="PTHR39164"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07301">
        <property type="entry name" value="DUF1453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021441">
        <property type="entry name" value="DUF1453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="19417" checksum="4BDA2723AA3394A4" modified="2011-01-11" version="1">MFHISTPLLQYGATFGMILIAISAIFIRMKTGHRPINAKKIIIPPLGMSTGFMMFVVPEVRVPWLWALGAFLIGWFIFSYPLIRSTKFELQEGLVFVQRSRTFFFILISLLIVRLLLHEFIQHYITIPQTAGLFFILAFGTLLHWRLRMYFQYRQFIPEETEVRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE10</accession>
    <name>E3EE10_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-beta hydroxysteroid dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-643</name>
        <name evidence="2" type="ORF">PPSC2_02675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369130.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15440"/>
    <dbReference type="EnsemblBacteria" id="ADO54490">
        <property type="protein sequence ID" value="ADO54490"/>
        <property type="gene ID" value="PPSC2_02675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.499"/>
    <dbReference type="eggNOG" id="COG2910">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025711_3_1_9"/>
    <dbReference type="OMA" id="VDWTYLS"/>
    <dbReference type="OrthoDB" id="948454at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="7"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="22833" checksum="C52A843AD4BBB49C" modified="2011-01-11" version="1">MKVIIFGATGTIGKALVKEAIKRKYEVTAAVRDPQRVTEQNEYLTVVQADILNPNSVTEVAKGHDAIISAYGPKFGAEEELLEATRSLLEGTRRSGAERILVVGGAGSLKTENGERLMDTAEFPEEVKPLAAAHADALELYRAADVDWTYCSPAGIIEPGKRTGQFRIGLDHLVVDELGHSRISVEDYAVALIDELVEGEFVNSRFTVGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE87</accession>
    <name>E3EE87_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Arabinose ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PPSC2_05030</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55010.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886091.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1028"/>
    <dbReference type="EnsemblBacteria" id="ADO55010">
        <property type="protein sequence ID" value="ADO55010"/>
        <property type="gene ID" value="PPSC2_05030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1015"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_61_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="107"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="204"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="246"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="271"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="293"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="331"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="358"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="8"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55010.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="389" mass="41383" checksum="CA09E44E404E6DA8" modified="2015-05-27" version="2">MVNQKNLLVFILTIGVFGILNTEMGVIGLLPSIAEHYHVSASTAGWLVSSFALAVAVSGPILPLLFSGINRKKVMLLVLGVFVLGNVVSIFTTNFTIALVARVVPALFHPVYCSLAFTVAAASVSQEEAPKAVSKVFIGVSAGMVIGVPIASLIAGAVSLQMSMVFFAAVNIMVFIATLLFVPSMPVEERLSYGAQLSVLKKPATWLSIVTVILMNSAIFGVYSYFAEYLKTVTNMFSNTISLMLFIYGGANVIGNVVAGKLLINSAIKSVVSFPFVLGAVYIIMFFTGQLSVPMAIITLIWGMLAGFGGNMNQYLMTSSTPEAPDFANGLFLTSANLGVTFGATVGGFFIAEMGTQYVIFVGLLSLVLGFVAILLRNYMFTLTRSLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA7</accession>
    <name>E3EEA7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RGI_lyase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_05125</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18045"/>
    <dbReference type="CAZy" id="PL11">
        <property type="family name" value="Polysaccharide Lyase Family 11"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55030">
        <property type="protein sequence ID" value="ADO55030"/>
        <property type="gene ID" value="PPSC2_05125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1038"/>
    <dbReference type="eggNOG" id="COG3401">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5297">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002616_0_0_9"/>
    <dbReference type="OMA" id="DGLMWGD"/>
    <dbReference type="OrthoDB" id="149095at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd10318">
        <property type="entry name" value="RGL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028994">
        <property type="entry name" value="Integrin_alpha_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041624">
        <property type="entry name" value="RGI_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034641">
        <property type="entry name" value="RGL11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43118">
        <property type="entry name" value="PTHR43118"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18370">
        <property type="entry name" value="RGI_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69318">
        <property type="entry name" value="SSF69318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168826" description="RGI_lyase domain-containing protein" evidence="2">
        <location>
            <begin position="33"/>
            <end position="843"/>
        </location>
    </feature>
    <feature type="domain" description="RGI_lyase" evidence="3">
        <location>
            <begin position="57"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="782"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="798"/>
            <end position="814"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="843" mass="93436" checksum="DA20919637A32E26" modified="2011-01-11" version="1">MAQRKGAWRKGTLTAALAAMLAMTGTTGGVAAEDLSEPTLQAESSIAVEQNRSGSIQLEKLDRGLVAAATQEGVFLSWRLLAQEVNGYGSTGLTGADFNVYRDGKKIATVTDSTNYLDKEGTGNAVYRVASVVKGKEKDRSAKVKPWQQGYYELPLQKPADGVTPAGESYTYSANDMSVGDVDGDGQYEFFVKWDPSNSKDVSQKGYTGNTYVDAYTFEGKLLYRIDLGVNIRSGAHYTQMMVYDFDGDGKAELMFKTAPGTKTITFDKKGKPKKEKYITLPREDRKAGITHKDDYRLSRTDYYEHVVNMFMNWTKYEEVVKGQWPATLEECFGIAPKYSYPLSRKDAESLTDYFMDVYAPVRSDKNKLREFEGFIVDGPEYLTIFKGKTGTELETIRYEPERHDDGLMWGDYAMARIEPANRVDRFLAGVAYLDGRKPYAVFARGYYTRSTLVTYTWDGRHLQKHWMVDSGWAPMTNPFNDSPHGRDGTDPKFGTLTTQGAHSLSAADVDGDGKDEIVYGSATIDHDGSLLYSSFDVMPPESAIPGQTARLGHGDALHVTDIDPDRPGKEIFMVHEGGTYAPYGDSLRDAKTGKVLYGGYSGKDTGRGMVGDIDPDQRGLETWAIGLWTAAGKQLDTKMPGTNMSIKWAADMTTQIVNGAIDVTPTIEDWKRGTLLTASGTKTNNYTKGTPSLVADIFGDWREEMLVRTADSSAIRIYLSTEPTTHKLYTLMHDPQYRADVARQNTGYNQPSYTSFYFASDMDWANVPIPKLYTPRALMNEESSDEADEIEATEVDEKEVDEMKVEETSIDETKVDETEIGAKEIEGESVAPVVPVVPAEGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA9</accession>
    <name>E3EEA9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplB3</name>
        <name evidence="7" type="ORF">PPSC2_05135</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369665.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18060"/>
    <dbReference type="EnsemblBacteria" id="ADO55032">
        <property type="protein sequence ID" value="ADO55032"/>
        <property type="gene ID" value="PPSC2_05135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1040"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="OMA" id="IWQTAGW"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="181"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="233"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="285"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="92"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="320" mass="35600" checksum="CCCE6CE50A0B1ED7" modified="2011-01-11" version="1">MANLAKAAQRNVALGEQRTIRSKLDYIRKNYFLYVLLAPALILTILFKYVPMYGAIIAFKDFSPLKGIWGSDWVGLKYFTKFLDSPNFTDIFFNTLKLSFYGLVLGFPVPILLAVMLNQIRKAGLKKNIQLVLYAPNFISVVVIVGMLFIFLSPTGPLNQIIASVTGNPVIFMTEPEYFRWIYILSGIWQGAGWSSIIYVAALANVDPELHNAASLDGANLLQRIWHIDLPTIKPIMAIVFILAAGGIMSIGFEKAYLMQTSMNLPTSEIIPTYVYKVGLQSGNYAYSAAVGLFNSVINVVLLLTVNFIVKKLNEGEGLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEH4</accession>
    <name>E3EEH4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370056.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1446"/>
    <dbReference type="EnsemblBacteria" id="ADO55425">
        <property type="protein sequence ID" value="ADO55425"/>
        <property type="gene ID" value="PPSC2_06940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1431"/>
    <dbReference type="eggNOG" id="ENOG503385G">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1625451_0_0_9"/>
    <dbReference type="OMA" id="NTQKEIC"/>
    <dbReference type="OrthoDB" id="1668504at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18410" checksum="5CDA96666170AC86" modified="2011-01-11" version="1">MNIMRLEEVIESGDLKVAIRIIEDVGEKLDHTFTPILLSYLATTDSALLRNVIAITLADLGDSEAVLPLIDLLRSPKTKGNRGTLLYALEFFDVSTHVVVLVDLLDDTFEASRQSYQLISTVQDKISEAQKELCRQMIRRKLGDHKNKYKRDFLLESLELFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEJ1</accession>
    <name>E3EEJ1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L35</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rpmI</name>
        <name evidence="6" type="ORF">PPSC2_07030</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the bacterial ribosomal protein bL35 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55442.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429516.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20010"/>
    <dbReference type="EnsemblBacteria" id="ADO55442">
        <property type="protein sequence ID" value="ADO55442"/>
        <property type="gene ID" value="PPSC2_07030"/>
    </dbReference>
    <dbReference type="GeneID" id="66573530"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1450"/>
    <dbReference type="eggNOG" id="COG0291">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_169643_4_2_9"/>
    <dbReference type="OrthoDB" id="2046660at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.410.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00514">
        <property type="entry name" value="Ribosomal_L35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021137">
        <property type="entry name" value="Ribosomal_L35"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001706">
        <property type="entry name" value="Ribosomal_L35_non-mt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037229">
        <property type="entry name" value="Ribosomal_L35_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01632">
        <property type="entry name" value="Ribosomal_L35p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00064">
        <property type="entry name" value="RIBOSOMALL35"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143034">
        <property type="entry name" value="SSF143034"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00001">
        <property type="entry name" value="rpmI_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55442.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="66" mass="7489" checksum="58B7FAAB41FCE1F0" modified="2015-05-27" version="2">MPKMKTHSSLKGRFKITGTGKVTRYKAYRNHLLSHKSKRAKRVLGTNPEMAPGDVRRLKQGLANLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN2</accession>
    <name>E3EEN2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 14">Pyruvate kinase</fullName>
            <ecNumber evidence="4 14">2.7.1.40</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="primary">pykA3</name>
        <name evidence="18" type="ORF">PPSC2_08250</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 19">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>ATP + pyruvate = ADP + H(+) + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:18157"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.40"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 14">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 14">Belongs to the pyruvate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.40" evidence="4 14"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370340.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20855"/>
    <dbReference type="EnsemblBacteria" id="ADO55719">
        <property type="protein sequence ID" value="ADO55719"/>
        <property type="gene ID" value="PPSC2_08250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1734"/>
    <dbReference type="eggNOG" id="COG0469">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015439_0_2_9"/>
    <dbReference type="OMA" id="QVPIVQK"/>
    <dbReference type="OrthoDB" id="1098983at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030955">
        <property type="term" value="F:potassium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004743">
        <property type="term" value="F:pyruvate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00288">
        <property type="entry name" value="Pyruvate_Kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1380.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001697">
        <property type="entry name" value="Pyr_Knase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018209">
        <property type="entry name" value="Pyrv_Knase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015793">
        <property type="entry name" value="Pyrv_Knase_brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015795">
        <property type="entry name" value="Pyrv_Knase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036918">
        <property type="entry name" value="Pyrv_Knase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015806">
        <property type="entry name" value="Pyrv_Knase_insert_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11817">
        <property type="entry name" value="PTHR11817"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00224">
        <property type="entry name" value="PK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02887">
        <property type="entry name" value="PK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01050">
        <property type="entry name" value="PYRUVTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="SSF50800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52935">
        <property type="entry name" value="SSF52935"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01064">
        <property type="entry name" value="pyruv_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00110">
        <property type="entry name" value="PYRUVATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="15" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="12 14" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="8 14 18" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0630">Potassium</keyword>
    <keyword evidence="13 18" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14 18" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PK" evidence="16">
        <location>
            <begin position="1"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="domain" description="PK_C" evidence="17">
        <location>
            <begin position="356"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="15">
        <location>
            <begin position="40"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00018587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF02887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ADO55719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="476" mass="51340" checksum="E545264A3345B1E9" modified="2011-01-11" version="1">MRKTKIVCTIGPSSESLENVKKLIMAGMNVARLNFSHGDFEEHGNRIKNIRQACKELNKNVAILLDTKGPEIRTGKLEVEPIELVQDEFITLTTEEILGTQDRISITYKDLPSDVEPGSTILIDDGLIGLTVIEVSGTEIKCRIVNGGTIKSKKGVNVPGVAISLPGITEKDANDIIFGIEQDIDFIAASFVRKASDVLEIRELLAKHNASHIQIISKIENQQGVDNLDEILEASDGLMVARGDLGVEIPAEEVPLAQKLMINKCNVAGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGKYPVESVLTMSRIAEKAESSLNYRDLFKKQRTAQEISITEAISQSVSISALDLHAKAILTSTQSGTTARMISKYRPEAPIIAVTTQERTVRRLALIWGVHAVQGRPIVDTTDSLFDNALEGGRKSGLVKEGDLVVITAGVPLGDSGSTNLIKISCVPAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP6</accession>
    <name>E3EEP6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370353.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20920"/>
    <dbReference type="EnsemblBacteria" id="ADO55733">
        <property type="protein sequence ID" value="ADO55733"/>
        <property type="gene ID" value="PPSC2_08315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1748"/>
    <dbReference type="eggNOG" id="ENOG503380J">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_150635_0_0_9"/>
    <dbReference type="OMA" id="LMVYSHI"/>
    <dbReference type="OrthoDB" id="1638338at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="15281" checksum="9FBC61E2E23046F4" modified="2011-01-11" version="1">MFFIHIIGSLAMGFYLLLPFVVGKIDKLAPSAQEGTISAVQLLNRLAQFALILVLISGIYMIFVWDSYSVAWIVVVLVLFLAISGIAGAMGKPLRLSLEAVRNQQPITQYAGKMRMFSTLLAVFMILITILMVYSHII</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EES3</accession>
    <name>E3EES3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Tagatose-6-phosphate kinase</fullName>
            <ecNumber evidence="5">2.7.1.144</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fruB</name>
        <name evidence="7" type="ORF">PPSC2_08455</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + D-tagatofuranose 6-phosphate = ADP + D-tagatofuranose 1,6-bisphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12420"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58694"/>
            <dbReference type="ChEBI" id="CHEBI:58695"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.144"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + beta-D-fructose 1-phosphate = ADP + beta-D-fructose 1,6-bisphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14213"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:138881"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.56"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Carbohydrate metabolism; D-tagatose 6-phosphate degradation; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-tagatose 6-phosphate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the carbohydrate kinase PfkB family. LacC subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the carbohydrate kinase pfkB family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.144" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370379.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21060"/>
    <dbReference type="EnsemblBacteria" id="ADO55760">
        <property type="protein sequence ID" value="ADO55760"/>
        <property type="gene ID" value="PPSC2_08455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1777"/>
    <dbReference type="eggNOG" id="COG1105">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050013_1_0_9"/>
    <dbReference type="OMA" id="GETRSNI"/>
    <dbReference type="OrthoDB" id="1323781at2"/>
    <dbReference type="UniPathway" id="UPA00704">
        <property type="reaction ID" value="UER00715"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008662">
        <property type="term" value="F:1-phosphofructokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009024">
        <property type="term" value="F:tagatose-6-phosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001059">
        <property type="term" value="P:D-tagatose 6-phosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005988">
        <property type="term" value="P:lactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01164">
        <property type="entry name" value="FruK_PfkB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022463">
        <property type="entry name" value="1-PFruKinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017583">
        <property type="entry name" value="Tagatose/fructose_Pkinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000535">
        <property type="entry name" value="1PFK/6PFK/LacC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03168">
        <property type="entry name" value="1-PFK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03828">
        <property type="entry name" value="pfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00583">
        <property type="entry name" value="PFKB_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00584">
        <property type="entry name" value="PFKB_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0423">Lactose metabolism</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="6">
        <location>
            <begin position="10"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR000535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="32644" checksum="03E1D61176CF505E" modified="2011-01-11" version="1">MIYTVTLNPSIDYIVEVDDLKLGDLNRMKRDLKLPGGKGINVSRILNQLGADSTAIGFLGGFTGRFIDDTLREESIKTDFVMIEDDTRINIKLKHGDETEINGLGPAIREQEADALVQKLAGLQKNDIVVLSGSIPPSLGGDFYERLIRVCQDTGAEFVIDTTGEALMKALVHKPLLIKPNHHELAELFGVTIHSEEEIVTYGRKLLEAGAKNVLISMAGEGALFITADEVYHANVPAGTVKNSVGAGDSMIAGFVGTLALQGDPIEAFRAGVASGSATAFSDDLATREKIEQLRPQVTISKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF96</accession>
    <name>E3EF96_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA glycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ygjF</name>
        <name evidence="2" type="ORF">PPSC2_05265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369692.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18180"/>
    <dbReference type="EnsemblBacteria" id="ADO55059">
        <property type="protein sequence ID" value="ADO55059"/>
        <property type="gene ID" value="PPSC2_05265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1067"/>
    <dbReference type="eggNOG" id="COG3663">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042829_3_0_9"/>
    <dbReference type="OMA" id="FWPVLHL"/>
    <dbReference type="OrthoDB" id="2034230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000700">
        <property type="term" value="F:mismatch base pair DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006285">
        <property type="term" value="P:base-excision repair, AP site formation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10028">
        <property type="entry name" value="UDG-F2_TDG_MUG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015637">
        <property type="entry name" value="MUG/TDG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12159">
        <property type="entry name" value="PTHR12159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="1">
        <location>
            <begin position="16"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="20413" checksum="C2F78EF28EF92265" modified="2011-01-11" version="1">MTEPETELHEVDDHLDYGLSVVFIGFNPSLKSGEVGHHYANPRNRFWRILEGAGLTPRLYDPSEDRELLKLGYGFTNIVSRPTRGVEDITREEYAEGRLKLHAKLMEYRPKVACFVGKGVYTEYSKKSKADWGFQPEPLIPEMHEFVAPSSSGLVRMSLEEITDIYRRLQMFLSSEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFW2</accession>
    <name>E3EFW2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Xylanase deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">nodB1</name>
        <name evidence="3" type="ORF">PPSC2_08785</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370453.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21245"/>
    <dbReference type="EnsemblBacteria" id="ADO55834">
        <property type="protein sequence ID" value="ADO55834"/>
        <property type="gene ID" value="PPSC2_08785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1852"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021264_6_2_9"/>
    <dbReference type="OMA" id="YRIQNAN"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0858">Xylan degradation</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169194" evidence="1">
        <location>
            <begin position="32"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="2">
        <location>
            <begin position="176"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="378" mass="41942" checksum="47719A9AE8D95116" modified="2011-01-11" version="1">MKLLKVKWMAVCLMAICCLGLLGIHTNTASAQAQAPLLGVNDVLLDSNTIKPVMENDKLYVPIVTLGQKMGISTSANGNTLVLTGHNRSFTLDLNKGDVFERGGRTMVPIRTLTDAFGFTITIPTSNLYRIQNANASLSDAQFLNTFAAEIKQYAAVKPDKASNTGDTGNAKPSSRTIYLSFDDGPTAHTSQLLDILDKYNAKATFFMLGPEIRQHSAVMKRMVDAGHGLGLHGMTHQVKKIYASPAAALAEMNQDNEILFKATGKRTSLIRTPYGSKPYLKKAYRDQLTGAGYHIWDWNIDSNDWRYTKNPQHFVQTVLSDIKRLKKQGRTPVVLMHDKPSTIKVLPQIMAALQKEGYSFEPLNDNLTPLNFWNDHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFW7</accession>
    <name>E3EFW7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gas vesicle protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370457.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1867"/>
    <dbReference type="EnsemblBacteria" id="ADO55839">
        <property type="protein sequence ID" value="ADO55839"/>
        <property type="gene ID" value="PPSC2_08810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1857"/>
    <dbReference type="eggNOG" id="COG4980">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105320_0_3_9"/>
    <dbReference type="OMA" id="MKENCKS"/>
    <dbReference type="OrthoDB" id="1944655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024623">
        <property type="entry name" value="YtxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12732">
        <property type="entry name" value="YtxH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="11498" checksum="5CAC5AC36720AE2E" modified="2011-01-11" version="1">MKENCKSFIRGALVGSIAGSVAALLFAPKSGRELRQDITDQARHLSDKGQELAGKISDTSIEYTDKIKETASAVIHELGQWRKKSDIASKVGISSVPVQGNTKEDAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGX0</accession>
    <name>E3EGX0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">GDP-mannose 4,6-dehydratase</fullName>
            <ecNumber evidence="3 4">4.2.1.47</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">GDP-D-mannose dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">gmd</name>
        <name evidence="6" type="ORF">PPSC2_05910</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>GDP-alpha-D-mannose = GDP-4-dehydro-alpha-D-rhamnose + H2O</text>
            <dbReference type="Rhea" id="RHEA:23820"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57527"/>
            <dbReference type="ChEBI" id="CHEBI:57964"/>
            <dbReference type="EC" id="4.2.1.47"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.47" evidence="3 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369836.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18875"/>
    <dbReference type="EnsemblBacteria" id="ADO55204">
        <property type="protein sequence ID" value="ADO55204"/>
        <property type="gene ID" value="PPSC2_05910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1210"/>
    <dbReference type="eggNOG" id="COG1089">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_14_0_9"/>
    <dbReference type="OMA" id="TDCLYLG"/>
    <dbReference type="OrthoDB" id="955232at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008446">
        <property type="term" value="F:GDP-mannose 4,6-dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070401">
        <property type="term" value="F:NADP+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019673">
        <property type="term" value="P:GDP-mannose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00955">
        <property type="entry name" value="GDP_Man_dehydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006368">
        <property type="entry name" value="GDP_Man_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43715">
        <property type="entry name" value="PTHR43715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01472">
        <property type="entry name" value="gmd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="5">
        <location>
            <begin position="5"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="37143" checksum="D8DC23E55039E094" modified="2011-01-11" version="1">MKKALITGITGQDGSYLAELLLSKDYEVYGVRRRTSTPNFENVAHIQNDIHWLSGDMTDLASLIEAVRQSNPDEVYNLAAQSFVAASWPQPLATGQITALSVTNMLEAVRIAKPEARFYQASSSEMFGKVLETPQTEMTPFYPRSPYGVAKVYGHWITVNYRESFDMFACSGILFNHESPRRGLEFVTRKVSDAVARIKLGLQQELRMGNLDSLRDWGFAGDYVKAMWLMLQQDRPDDYVISTGEMHSVRELLQIAFSHVGLNYEDYVVIDPQFVRPAEVDLLLGDCAKAKEKLGWRLEVGFEQLVRMMVDADLERVKRQAAVEASVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGZ2</accession>
    <name>E3EGZ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">4'-phosphopantetheinyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sfp1</name>
        <name evidence="6" type="ORF">PPSC2_07535</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the P-Pant transferase superfamily. Gsp/Sfp/HetI/AcpT family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370179.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20505"/>
    <dbReference type="EnsemblBacteria" id="ADO55552">
        <property type="protein sequence ID" value="ADO55552"/>
        <property type="gene ID" value="PPSC2_07535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1557"/>
    <dbReference type="eggNOG" id="COG2091">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057011_6_2_9"/>
    <dbReference type="OMA" id="DYKMAVC"/>
    <dbReference type="OrthoDB" id="1542506at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008897">
        <property type="term" value="F:holo-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008278">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037143">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004568">
        <property type="entry name" value="Ppantetheine-prot_Trfase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01648">
        <property type="entry name" value="ACPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56214">
        <property type="entry name" value="SSF56214"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00556">
        <property type="entry name" value="pantethn_trn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACPS" evidence="5">
        <location>
            <begin position="104"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="26590" checksum="8F2732E12208AD86" modified="2011-01-11" version="1">MEIYAIDTSKPEAENHYELLVNRVSLAKQHKLDRFLHREDALRGLYADVLLRWLACRQLKIPNASLQFTYNAFGKPSLLNAPAFHFNVSHSGKWVVCAIDDHPLGIDIEQLRPIDFEVGRVCFSDTEYDALMHQDAESRLSYFYDLWTLKESFVKAEGQGLTLPLKSFSFELETQPSIGFTTEGFTTVYCHFKQYELDPDYKMAVCAAHDDFAQVVQQVDINTLRLEVATLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGZ3</accession>
    <name>E3EGZ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcJ2</name>
        <name evidence="2" type="ORF">PPSC2_07540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370180.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20510"/>
    <dbReference type="EnsemblBacteria" id="ADO55553">
        <property type="protein sequence ID" value="ADO55553"/>
        <property type="gene ID" value="PPSC2_07540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1558"/>
    <dbReference type="eggNOG" id="COG1574">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009942_3_1_9"/>
    <dbReference type="OMA" id="VAWVGSE"/>
    <dbReference type="OrthoDB" id="751534at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01300">
        <property type="entry name" value="YtcJ_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013108">
        <property type="entry name" value="Amidohydro_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033932">
        <property type="entry name" value="YtcJ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07969">
        <property type="entry name" value="Amidohydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro_3" evidence="1">
        <location>
            <begin position="48"/>
            <end position="527"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="529" mass="58243" checksum="A0E9AA05C4FCEF52" modified="2011-01-11" version="1">MTFVLFKHGRLYGDWATKGDSIVVQHGRIQAIGNARELELQLSGKEYETVDWEGAHVLPGLTDAHMHLSMHGMKLAMLDLTSATSKNEMLAMLRKRVAVTPPGEWILGLNWNENAFNPVEIPNIAELDAITDQHPVYLTRTCFHTFLANSEAFRRAGINENTPDPASGAYGRDAEGRLNGLIYEEASFAFTSVQPEPDYSVKKDTIRRACLDALRLGLTAAHTEDLRFLGSVETMQRIYRELREEGLAFRTHQLIYHPFMEEVKVQELRAGTGNEWFKIGAIKMFADGAIGGRTALLSEPYSDAPHTCGMAIQPQPELNQMVAAARAAGFPVAVHAIGDEAAHMILTAMEAHGLTEESGLPDRLIHGQVLRADLVKRMAKLPLIADIQPRFVASDFPWVLDRVGKERSEYLYAWKKLLQVGIPCAGGSDAPIEPLNPFLGIHAAVTRAKPEETHEGYLPAEKLDVHEALHLFTMGSAVAAGEAADRGTIAEGKAADFTVIDRDVSESHQALLDVKVRMTVVNGQVAYRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH17</accession>
    <name>E3EH17_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370204.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55577">
        <property type="protein sequence ID" value="ADO55577"/>
        <property type="gene ID" value="PPSC2_07645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1582"/>
    <dbReference type="eggNOG" id="ENOG50305RD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_663647_0_0_9"/>
    <dbReference type="OrthoDB" id="1230098at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169235" evidence="1">
        <location>
            <begin position="28"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="414" mass="45918" checksum="83E380FA6AD09801" modified="2011-01-11" version="1">MRRIFVSLLVSSCLLISGLLPTALSYAENSTSNLPVVVEDAAVFYLVPHQLTAELNKSSLSLDFVSIKTAPLLKRNNHLYFPFKWLETAHLATIKWDAKTGSTWAEFNTGNSVPFSSLRLMPNQSKIYSYFDGKMTALDESIPKTFMKNGQLYIPVSFLSKMGIIYTWNNGIMHWTWNDKIIKALHPTYTTDKENITFSALVQKEFGHAYLMVNTGDGGMTSSIGGSISTFKGKEKNIGKPIIMNGQTFQRIEYSVELRPGPNPLEIHTNDKGSVKIMVHRKVLNPSSVPIRYNHAGNEQDIRFTKPSQGYLRVKAGDSIAIAGVVMDTYIQSNEVSFGVAAFQNGDFVEVEKKTVIPLKQDKSFSGSVVIQKPGTYLVNILSPDVFVGGSSPYGSVKWAEIAVEVLPKTKKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH54</accession>
    <name>E3EH54_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alanyl-tRNA synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">alaRS</name>
        <name evidence="2" type="ORF">PPSC2_07785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1638"/>
    <dbReference type="EnsemblBacteria" id="ADO55614">
        <property type="protein sequence ID" value="ADO55614"/>
        <property type="gene ID" value="PPSC2_07785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1619"/>
    <dbReference type="eggNOG" id="COG5444">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053824_0_0_9"/>
    <dbReference type="OMA" id="GATQERF"/>
    <dbReference type="OrthoDB" id="1999616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004812">
        <property type="term" value="F:aminoacyl-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036689">
        <property type="entry name" value="ESAT-6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010310">
        <property type="entry name" value="T7SS_ESAT-6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06013">
        <property type="entry name" value="WXG100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140453">
        <property type="entry name" value="SSF140453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03930">
        <property type="entry name" value="WXG100_ESAT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="253"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="256"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="31870" checksum="5F89AC8A7938B551" modified="2011-01-11" version="1">MGRILVPPDKLMEVADQFLHGKHELERMLNHLSGRIDFVQQGWSGATQERFFQEFQVSRQSMSVTLERLSMVAQELIFISKSFTQVDGEKVVLDVPWLGTPVKTASTGEGWLHKIFEQIGKAEITKAEAQMEASKLQGEILWDTAQGAKSAIQEDLSLGMLPDKERDYDHPMAAKVGEILGHVATTLQGAGEVVAGLGGEGLSVAVSSTGVGSIIGVPGLIGSAALTAHGATTAVKSASGVGEKTAELWQMARGEGGGSSKSTSSSGAKPESTPHALEGGAEVEIMLNPMTEHVIQKWIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH70</accession>
    <name>E3EH70_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">YrvD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yrvD</name>
        <name evidence="9" type="ORF">PPSC2_08915</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370479.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21380"/>
    <dbReference type="EnsemblBacteria" id="ADO55861">
        <property type="protein sequence ID" value="ADO55861"/>
        <property type="gene ID" value="PPSC2_08915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1879"/>
    <dbReference type="eggNOG" id="COG5416">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_152529_0_0_9"/>
    <dbReference type="OMA" id="IFRQYRL"/>
    <dbReference type="OrthoDB" id="1977640at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010445">
        <property type="entry name" value="LapA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06305">
        <property type="entry name" value="LapA_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="LapA_dom" evidence="8">
        <location>
            <begin position="39"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="110"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="79"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="15054" checksum="29BF3313112FF3B5" modified="2011-01-11" version="1">MADKGFYNVTEGGGILKTQWSLIAALVIALLTAVFAVINVNSVQVNLLFSRVSIPLILLILGCTLLGGLIVGSFGIFRQYRLQREIKRLTNQLHTLQEEHTSAVEAYANVSSDTTGSSSTVSTSDPGIEQSSSNPDRLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH85</accession>
    <name>E3EH85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370494.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21455"/>
    <dbReference type="EnsemblBacteria" id="ADO55876">
        <property type="protein sequence ID" value="ADO55876"/>
        <property type="gene ID" value="PPSC2_08990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1894"/>
    <dbReference type="eggNOG" id="ENOG5032K4G">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_150011_0_0_9"/>
    <dbReference type="OMA" id="KTRYYNL"/>
    <dbReference type="OrthoDB" id="1832579at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010865">
        <property type="entry name" value="DUF1499"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07386">
        <property type="entry name" value="DUF1499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="14543" checksum="CDAE0B89C25FF979" modified="2011-01-11" version="1">MSLKRTLVGIVRSQEGTSDRVKDPQMKTRYYNLSRDKAWEEVSSIMKKIPGYKVLHEVSSVGEITLEKRTAFGRTVDITVSILSVSPVRSAVDIYSASRGSLGDLGANYRIILQLFAMIDKKLSAYKVVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHA3</accession>
    <name>E3EHA3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YpuF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypuF</name>
        <name evidence="2" type="ORF">PPSC2_09070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370511.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21540"/>
    <dbReference type="EnsemblBacteria" id="ADO55894">
        <property type="protein sequence ID" value="ADO55894"/>
        <property type="gene ID" value="PPSC2_09070"/>
    </dbReference>
    <dbReference type="GeneID" id="66578124"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1911"/>
    <dbReference type="eggNOG" id="COG1547">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133698_1_0_9"/>
    <dbReference type="OMA" id="NIPQQRG"/>
    <dbReference type="OrthoDB" id="1858218at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005500">
        <property type="entry name" value="DUF309"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023203">
        <property type="entry name" value="TTHA0068_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34796">
        <property type="entry name" value="PTHR34796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03745">
        <property type="entry name" value="DUF309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140663">
        <property type="entry name" value="SSF140663"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="137"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="151"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="21578" checksum="E3E930AC3EE4B9A1" modified="2011-01-11" version="1">MVNPSYEPLYVTYLVYFNRDRDYFECHEVLEELWLKLDRDPVYKGLLQIAVGLYHFRNGNYRGGYMMLDSAVHRLEHAASHALGINMAKLVDEARACARQLAEAVMEGSEELQRQPPVYRDLTIEIVEPGLRQAVEKASSSVPVNIPQQRGPRRGEKHEQRQQALEASIRRRQAAGSLRSATVETKDAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHK9</accession>
    <name>E3EHK9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">XynX3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">xynX3</name>
        <name evidence="3" type="ORF">PPSC2_10330</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370769.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22800"/>
    <dbReference type="EnsemblBacteria" id="ADO56162">
        <property type="protein sequence ID" value="ADO56162"/>
        <property type="gene ID" value="PPSC2_10330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2176"/>
    <dbReference type="eggNOG" id="COG5492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072307_0_0_9"/>
    <dbReference type="OMA" id="MNIQVIT"/>
    <dbReference type="OrthoDB" id="1507232at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025748">
        <property type="entry name" value="PrcB_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14343">
        <property type="entry name" value="PrcB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169247" evidence="1">
        <location>
            <begin position="26"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="21"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="35305" checksum="41AABEE18207542D" modified="2011-01-11" version="1">MIKNKSVAAALLVVCSLAVATSASAFRDIKGAEQEKIVSSLQDKGIIQGITKDKFAPDQTLTYAQGVHLVVRAMDLQVMPDFTTGSFANIPASAWYADSYRIAVQHQIPLSPDIDPSTRMTREQFANILYKAVSATGEYPTVRMFINVADGKKLDQNSNEAVQFLLLTKIAKLDEESNFNPDRKVTRMEAAEMVYHASEFVQSHKPVQATPENPAEPVDPVQQTNISMNIEKANDQQNKVTITRLQAPNPGYGIEVDHIDYVDDTNAVIYYKLTSPKPGEMNIQVITDTHTSTLVDSKYKVTLKAVDGTVLPPTGTGTSVAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHM4</accession>
    <name>E3EHM4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">sasA</name>
        <name evidence="10" type="ORF">PPSC2_10875</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370892.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2314"/>
    <dbReference type="EnsemblBacteria" id="ADO56286">
        <property type="protein sequence ID" value="ADO56286"/>
        <property type="gene ID" value="PPSC2_10875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2303"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_3_9"/>
    <dbReference type="OMA" id="EPQWSAK"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="142"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="42197" checksum="EE98E3AD3F859D03" modified="2011-01-11" version="1">MKREPGFLRILARFMLVLLVLYLSWTAAYFITAVIYSRLSWTPHELFVYLINATLGFFFFGIISMTVRRFIQPREQHFFTEMIDALKRISEGDFHINLGWNFGTRNGNHDRTHPYIQLVDSINDMAANLKVMEELREAFISNVSHEIGSPLTSIIGFAKALKDDNLDREQRDRYLTIIETECIRLSKLSDNLMKLAVLDSERHPFHPSSYRLNKQLISLILACEPQWEAKQIDMIVDTHNVQVNADEDLMGQVWVNLLHNAIKFTPQGGSISVSLSSNGNQAVVCITDTGPGINEQDQQRIFERFYKADKSRTRTAGGSGLGLSIAHKITEMHSGSISVSSKVGEGTAFTVLLPLQEETVKGNSNHEMSGNSGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHN0</accession>
    <name>E3EHN0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lysR1</name>
        <name evidence="3" type="ORF">PPSC2_10905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370898.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23295"/>
    <dbReference type="EnsemblBacteria" id="ADO56292">
        <property type="protein sequence ID" value="ADO56292"/>
        <property type="gene ID" value="PPSC2_10905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2309"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="ECGSLDW"/>
    <dbReference type="OrthoDB" id="750230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="296" mass="33886" checksum="8593309D47FF01A7" modified="2011-01-11" version="1">MNIENIEAFVYVNHYGSFNKAAEALFLSQPSVTARIQTLERELECKLFDRQSKQTILTEDGRKFLPYAEQMLQVLQKGKQKLQQRKKAPQQIRIGCTISVSNYIIPEILKQLRARYPEVNYKIVTATTDQLLHKLLNREVDISFVRKVMHPAIRTLAFYEDPISLYVYEGHPFTKTGKASIQDIQRETLVFFECGSLDWMRIHRSFESLEQPPDIAFQVDNVVTAKKLVLQEAGIAFLPDVCVSREVKDQKLFRIHIPEVAGVSMQISIIATKEDCAVSSDFADALTEGFREAVLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHT0</accession>
    <name>E3EHT0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">GTPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">COBW1</name>
        <name evidence="4" type="ORF">PPSC2_11135</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. CobW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370947.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23530"/>
    <dbReference type="EnsemblBacteria" id="ADO56342">
        <property type="protein sequence ID" value="ADO56342"/>
        <property type="gene ID" value="PPSC2_11135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2358"/>
    <dbReference type="eggNOG" id="COG0523">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017452_1_4_9"/>
    <dbReference type="OMA" id="HEYNSRF"/>
    <dbReference type="OrthoDB" id="1267701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036627">
        <property type="entry name" value="CobW-likC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00833">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobW C-terminal" evidence="3">
        <location>
            <begin position="279"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="223"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="369" mass="41087" checksum="513191110B93D0DA" modified="2011-01-11" version="1">MMNKVPVILISGFLGSGKTTLLLRLLAHTRQIPLRAAVLMNEMGEYDVDSAIISEEMPDVTVEGLLEGCICCSKRNELAGALHTLLIQKPDVIFMETTGVANPEQVLEELRSPLLADRLYLVHSISVVDAVLFHEYNSRFTADKELVRTLHGQLRSADFIVVNKTDVASSREVAKVVKNIRKLNNTAKLQTTEYSRVDLGPLLEPVLTSVMLDPKPVQVFQHTSAQVQPNDAEASPIPIPTKDNERPSSTFKNTAFKVISAHPHNHSHDRNRPPSFSRLESLTLHQYSPRPLDKQRLEDFLTGLGSSLLRAKGYCVLPYEGTMLLQFSGSHLEWQPTALPVSQGYVTLIGEQLDKASITDQWEQCFVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI46</accession>
    <name>E3EI46_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ucpA</name>
        <name evidence="1" type="ORF">PPSC2_03680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369350.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0731"/>
    <dbReference type="EnsemblBacteria" id="ADO54714">
        <property type="protein sequence ID" value="ADO54714"/>
        <property type="gene ID" value="PPSC2_03680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.724"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_2_9"/>
    <dbReference type="OMA" id="WPETPEI"/>
    <dbReference type="OrthoDB" id="1209997at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="27677" checksum="19C96F1416792E68" modified="2011-01-11" version="1">MSFQLESILSEFKGKRALVTGGTQGMGEAIAKRLTAAGATVITTARTTPVNLENPDLFIPADISTPEGVDKVVTSVLERLGDVDILVNNVGGSSAPSGGALVLTDEHWQQTFNANLFAAVRLDRGLLPAMVEKGSGVIIHISSIQRRLPLYDATLAYAAAKAALTTYSKGLSKQFSPQGIRINTVAPGFIETKAAQSLIDRIAETTGDRESALKQLMDSLGGIPIGRPGLPEEVAELVAFLVSDRAASITGSEYNIDGGTVPTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI95</accession>
    <name>E3EI95_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_03895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0780"/>
    <dbReference type="REBASE" id="28400">
        <property type="entry name" value="M.PpoSC2ORF780P"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54763">
        <property type="protein sequence ID" value="ADO54763"/>
        <property type="gene ID" value="PPSC2_03895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.771"/>
    <dbReference type="eggNOG" id="COG0338">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2618739_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="9166" checksum="5C5D561262ED5374" modified="2011-01-11" version="1">MMFEAAWNLLLVNRLAFSGIYRANPLGGMRGDPKILLSRWNPDDLCKRINTIHSMSDRFTVQNRDALEFIEDQFWYKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIN5</accession>
    <name>E3EIN5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Abortive infection protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">caaX</name>
        <name evidence="2" type="ORF">PPSC2_08020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370296.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1698"/>
    <dbReference type="EnsemblBacteria" id="ADO55673">
        <property type="protein sequence ID" value="ADO55673"/>
        <property type="gene ID" value="PPSC2_08020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1686"/>
    <dbReference type="HOGENOM" id="CLU_082387_1_0_9"/>
    <dbReference type="OMA" id="WTIKELT"/>
    <dbReference type="OrthoDB" id="1623593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071586">
        <property type="term" value="P:CAAX-box protein processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003675">
        <property type="entry name" value="Rce1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02517">
        <property type="entry name" value="Rce1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="160"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="201" mass="23430" checksum="7B810938411DFF55" modified="2011-01-11" version="1">MPKSKLILFILFFYIGWTIKELTFHPKITDLELYLISFLIKMIFWIGLVVIYFVYIDRVKLQQIIDYIKLKQNIIKGVFTGGIIGLLLVAIEATIFNGFRLDIGIRWIITPLTAFSEEVVFRGFVMNKLRDHRVKGYNFIQAILFMGIHFPIGIISGYSLLNYLTIFLVGYILGFIYKKTSSIWAPTIAHSVYNILIYLRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIT9</accession>
    <name>E3EIT9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yvgS</name>
        <name evidence="7" type="ORF">PPSC2_09370</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370575.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21840"/>
    <dbReference type="EnsemblBacteria" id="ADO55958">
        <property type="protein sequence ID" value="ADO55958"/>
        <property type="gene ID" value="PPSC2_09370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1975"/>
    <dbReference type="eggNOG" id="COG3973">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010312_4_0_9"/>
    <dbReference type="OMA" id="DPMVIDW"/>
    <dbReference type="OrthoDB" id="114076at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000212">
        <property type="entry name" value="DNA_helicase_UvrD/REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014016">
        <property type="entry name" value="UvrD-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027785">
        <property type="entry name" value="UvrD-like_helicase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11070">
        <property type="entry name" value="PTHR11070"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00580">
        <property type="entry name" value="UvrD-helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13538">
        <property type="entry name" value="UvrD_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51198">
        <property type="entry name" value="UVRD_HELICASE_ATP_BIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD-like helicase ATP-binding" evidence="6">
        <location>
            <begin position="210"/>
            <end position="617"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="231"/>
            <end position="238"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="784" mass="90538" checksum="E392019CB775FECB" modified="2011-01-11" version="1">MTTEQQWNEEQRRVEDVTAVISGRIRKLETEVGSVRGDVVDMRKDFWDEVTINFSEADDVGETSTSLRQQSEILSERERRHKHSTEALGRLKKLLDSPYFARIDFAEEGQTAERIYLGIASLLDNQDEEFLIYDWRAPISNLYYDNMPGPASYKTPAGEMEGELTLKRQFSIRDGQIRFMFDTGVTIGDELLQAVLSRSSDAQMKSIVATIQKEQNRIIRDDRSRMLIVQGAAGSGKTSAALQRVAYLLYKYRDRLRADQVVLFSPNPMFNSYVSTVLPELGEENMLQATFQEYLERRLGREFQLEDPFEQLEYVLSASSQPGYEARMEGIRFKSSKTFLHVITGYKAHLEQEGMRFKPVRFQGREVISVEQMASKFYEFDSAVRLANRLELLRDWMLKELARFGKEECSAPWVDQQMDLMEPEDYQRAYNRMRRKSKNKGDTFDDFTREREILARMVVSDRLKPLRKWIKALRFVDTTRLYSELFMNETLLSQLSNHAELPVNWSEISRQTLKRIQAGELAYEDVTPFLYLRELMLGFRSNSNIRHVFIDEAQDYSPFQLAFFKRLFPQAKMTALGDFNQAIYAHASVLQDAEPLYDLYGADQTEMISLTRSYRSTQEIVEFTRGMVAGGEHIVPFNRKGEKPLVTEVNSREKLHQLIAGNVTKLLAEGYESIAVICKNADESAAAYEALEGQLPVKPKLIKKTTPAFEKGIHIIPAYLAKGVEFDAVLIYDGSVQEYQRESERKLFYTACTRAMHLLHIYSIGEITPFVSSQESETYIRKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJD2</accession>
    <name>E3EJD2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Molybdenum ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ylmA1</name>
        <name evidence="5" type="ORF">PPSC2_11510</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371024.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23875"/>
    <dbReference type="EnsemblBacteria" id="ADO56419">
        <property type="protein sequence ID" value="ADO56419"/>
        <property type="gene ID" value="PPSC2_11510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2434"/>
    <dbReference type="eggNOG" id="COG1119">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
    <dbReference type="OMA" id="HVLMIRQ"/>
    <dbReference type="OrthoDB" id="1752365at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="5"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="28925" checksum="CC9EDE7049C8AB9A" modified="2011-01-11" version="1">MNSVIELNNVSWKRDNRTILDQINWQVAEGEHWAVLGLNGSGKTTMLNMINGYIWPTTGSVGVLGHTFGDVDLRELRKSIGWVSSSLQERINGSQRTQDVVISGKFASIGLYDQTTDTDDKQAVQLMTQLGCAHLVDRLYQGCSQGEKQKVLIARALMASPKLLILDEACNGLDFFSREALLDSVRQLSEAPGAPNLLYVTHHIEEILPMYTHTILIRRGTVFAKGKTTDILSSETLSAFFETPVQVDWRQDRAWLSMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJJ8</accession>
    <name>E3EJJ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xenobiotic reductase b</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371152.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2578"/>
    <dbReference type="EnsemblBacteria" id="ADO56548">
        <property type="protein sequence ID" value="ADO56548"/>
        <property type="gene ID" value="PPSC2_12120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2563"/>
    <dbReference type="eggNOG" id="COG1902">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2370202_0_0_9"/>
    <dbReference type="OrthoDB" id="267730at91061"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="2"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="10598" checksum="62292A3024AE7160" modified="2011-01-11" version="1">MLDQFLTDYTSRQTDEYGGSIENRIPVIANGQLDDPDKAATIIGQGFADVIALEKGVLANYDWIKKVRNGKPLSELDQNKVLRPDATIKDFEISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJR9</accession>
    <name>E3EJR9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Translation initiation factor IF-3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">infC</name>
        <name evidence="8" type="ORF">PPSC2_26780</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="8 9">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
            <plasmid evidence="8 9">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 5">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the IF-3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59667.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886291.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0276"/>
    <dbReference type="EnsemblBacteria" id="ADO59667">
        <property type="protein sequence ID" value="ADO59667"/>
        <property type="gene ID" value="PPSC2_26780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5661"/>
    <dbReference type="eggNOG" id="COG0290">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054919_3_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00080">
        <property type="entry name" value="IF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036788">
        <property type="entry name" value="T_IF-3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036787">
        <property type="entry name" value="T_IF-3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019813">
        <property type="entry name" value="Translation_initiation_fac3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001288">
        <property type="entry name" value="Translation_initiation_fac_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019815">
        <property type="entry name" value="Translation_initiation_fac_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019814">
        <property type="entry name" value="Translation_initiation_fac_3_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10938">
        <property type="entry name" value="PTHR10938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00707">
        <property type="entry name" value="IF3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05198">
        <property type="entry name" value="IF3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54364">
        <property type="entry name" value="SSF54364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55200">
        <property type="entry name" value="SSF55200"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00168">
        <property type="entry name" value="infC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00938">
        <property type="entry name" value="IF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4 5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="8" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3 4 5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IF3_N" evidence="7">
        <location>
            <begin position="1"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="IF3_C" evidence="6">
        <location>
            <begin position="77"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59667.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="164" mass="18652" checksum="FFCEEE37B202F0D1" modified="2015-05-27" version="2">MNEQITAKEVRLIGSDGKQHGIYNLADALLIAEEAKLDLVNISPAATPPVCKVVNYGKFLYEQNRKEKEIRKNQKIVETKEVRFSARIDEHDFQTKSRNVQKFLKSGNRVKLSIQFKGREIAHSEIGLNILLRLAAEMEAFGSPERTPKLEGRQMIMFLNPKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK78</accession>
    <name>E3EK78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386201.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0397"/>
    <dbReference type="EnsemblBacteria" id="ADO59787">
        <property type="protein sequence ID" value="ADO59787"/>
        <property type="gene ID" value="PPSC2_26225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5522"/>
    <dbReference type="eggNOG" id="ENOG50306MH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2845668_0_0_9"/>
    <dbReference type="OrthoDB" id="2097508at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7762" checksum="B5C37EC50B69C7D8" modified="2011-01-11" version="1">MSKIRLKRRIERFYTDVDGDLVFALYEDIEGNIHYRYCTFDTDKYTMLSQAFLKHFTKEDEKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKT0</accession>
    <name>E3EKT0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385945.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59531">
        <property type="protein sequence ID" value="ADO59531"/>
        <property type="gene ID" value="PPSC2_27435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5807"/>
    <dbReference type="HOGENOM" id="CLU_2274610_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="11870" checksum="A7280C7F34CBE151" modified="2011-01-11" version="1">MVLAKYMGSIVILLIVFGYYLFKMKKDDRLKNRYIIFTSIGFGFMALPSWFITNKNVLMVCSVLAIVLVVIGLLLYIQMRKSLNIEKGDTKSEKKYRTKKDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKU9</accession>
    <name>E3EKU9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_27345</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="8 9">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
            <plasmid evidence="8 9">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0157"/>
    <dbReference type="EnsemblBacteria" id="ADO59550">
        <property type="protein sequence ID" value="ADO59550"/>
        <property type="gene ID" value="PPSC2_27345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5787"/>
    <dbReference type="eggNOG" id="COG1191">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014793_8_7_9"/>
    <dbReference type="OrthoDB" id="1857862at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000770">
        <property type="entry name" value="RNA_pol_sigma-SigE/K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0614">Plasmid</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="2" id="KW-0749">Sporulation</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="7">
        <location>
            <begin position="205"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="28481" checksum="402CAE668526A398" modified="2011-01-11" version="1">MTFQNEERTVLFSNEVAEQTPWEDTETIEAASAQETKESEEVVEYVKLPLTDAEKDKHAREDESLVFYVVKMFENSGVDYDELVSIAMVGFAKALHAFDKNRLVKFSTYSINCIKNEILFFLRKERNHVKNSISMNCVLSVDKNGNSLSLEDTVSTFDKDERSVEDDIVLSDEIKLLRSALSDLSDKEQYIITYRYGLDRGITKTQREIADAIGMSQANVSKIEKNILDKVKKILKDRYHMTEELFAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL01</accession>
    <name>E3EL01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27285</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385977.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59563">
        <property type="protein sequence ID" value="ADO59563"/>
        <property type="gene ID" value="PPSC2_27285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5774"/>
    <dbReference type="eggNOG" id="ENOG5030BTC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_132077_0_0_9"/>
    <dbReference type="OMA" id="LKVAMFD"/>
    <dbReference type="OrthoDB" id="1454425at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="20091" checksum="F77A649A857852B6" modified="2011-01-11" version="1">MQIKLSQAVTLQSIIKKRLGELKQERDQLAYLFVAKGDQPDTPEDRTFDQVNIEIEATQMDLLEVESKIAKANSTFCIEWDGRNMTIGDALRLAKLYRDRAREYGDYGSQRDNEIDRSRMLTTPVLKVLTYKPKDYAENAQKLTRKANKISDLIDEANLQNMILYPRYSVYMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-09-29" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC95</accession>
    <name>A0A0D5ZC95_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Metallophos domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886195.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0284"/>
    <dbReference type="EnsemblBacteria" id="AKA44360">
        <property type="protein sequence ID" value="AKA44360"/>
        <property type="gene ID" value="PPSC2_26735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5651"/>
    <dbReference type="eggNOG" id="COG0639">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023125_4_2_9"/>
    <dbReference type="OrthoDB" id="900869at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="1">
        <location>
            <begin position="4"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26884" checksum="45D70B64A89B2ABB" modified="2015-05-27" version="1">MNDIFAIGDIHGSYDKFRALMKHWNPDKQQLVILGDLIDRGPDSLSVVRRCMELKKEYGAKILGGNHEWNLFDFIDKPNVYAKYYLEKGGRNTLQSFLGIKDSAIHKSPEKMAILMKERFFNELNFLRDLPDYYEHQHYVFVHAGVNLYLKDWKHTNPSDFRWIREPFHEAKNETGKIFVFGHTPTHYLNPDGNCGVWVSPCQSKIGVDGGAVFGGYLLGLSIQKDCYEVYAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCC9</accession>
    <name>A0A0D5ZCC9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886042.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44303">
        <property type="protein sequence ID" value="AKA44303"/>
        <property type="gene ID" value="PPSC2_20105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4285"/>
    <dbReference type="eggNOG" id="ENOG503062W">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1935976_0_0_9"/>
    <dbReference type="OrthoDB" id="2170001at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="13200" checksum="C4AA35923D94E4CB" modified="2015-05-27" version="1">MAVFSLGAVENLNPDGSFHSSSVTLRITNTTALPLTPIVVTAYSAPGSAPTGTVAVPYFTTTFALGAPRAVVTLTIPTVVPAYQINVSSPAVAAAIISDISIAAQGRDAAGNFVPEHAFPFGDWAVIATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCD0</accession>
    <name>A0A0D5ZCD0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886251.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44395">
        <property type="protein sequence ID" value="AKA44395"/>
        <property type="gene ID" value="PPSC2_28270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5994"/>
    <dbReference type="HOGENOM" id="CLU_1813917_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16337" checksum="BC87E03447C21E8F" modified="2015-05-27" version="1">MSNLRCELCGQEMHEGELGGKAWVCSNKQCERSDPMWLSDSEKRIRKLLAENDEKIKALTTTTVAGKRCDIEFHKVRLMGEGSGTLLFENGERIPFMKSDGAYIFYTIEEPMIHALQTNTFLEHIENLRWLSIDRVSEILEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCI0</accession>
    <name>A0A0D5ZCI0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3510"/>
    <dbReference type="EnsemblBacteria" id="AKA44284">
        <property type="protein sequence ID" value="AKA44284"/>
        <property type="gene ID" value="PPSC2_16425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3507"/>
    <dbReference type="eggNOG" id="ENOG5030UX9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_162001_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="40"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="14600" checksum="B319586F1805B344" modified="2015-05-27" version="1">MILNRIIVHFELPKEGIMQSTNYLRRFLGMAKALMTPTTLAEALRLAADLAEKNEELERQLTELRLNQEYPEVLRPAHIMKLMGYSKAKVAELTNHPTFPHLNRGRRKGEAVTVLKSDFYEWLKGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCL5</accession>
    <name>A0A0D5ZCL5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44287">
        <property type="protein sequence ID" value="AKA44287"/>
        <property type="gene ID" value="PPSC2_17290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3695"/>
    <dbReference type="HOGENOM" id="CLU_2106578_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="7"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="13606" checksum="5B67397D28412C20" modified="2015-05-27" version="1">MSYSNIITNYNELNNKITSKIEETKEKLRQERINKYKADVDFVISDLLQKAGRITVCTVLEYTGVSYHTLYKSMPEVLLYIRKEKDRLNFNEIPKCCTNLFNSHSSHWQKKRVVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4A1</accession>
    <name>E3E4A1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yycB1</name>
        <name evidence="9" type="ORF">PPSC2_12545</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371245.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56641">
        <property type="protein sequence ID" value="ADO56641"/>
        <property type="gene ID" value="PPSC2_12545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2663"/>
    <dbReference type="eggNOG" id="COG2807">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038046_1_0_9"/>
    <dbReference type="OMA" id="WNVTLFM"/>
    <dbReference type="OrthoDB" id="806182at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="110"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="174"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="219"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="260"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="314"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="356"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="378"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="20"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="406" mass="43932" checksum="CF7B7F3A556E7BA3" modified="2011-01-11" version="1">MGISQKTNQLGQPKPDLKPRIGLLIIGIILMGANLRAPLTSVGPLINSIRDSLGISNILAGTITTVPLLTFAFLSPFAPKLAQRFSTEFILFISLILLTIGFGIRSFGGVITLFIGTILIGSCIAIGNVLLPSLIKHNFAQNVGMITGIYIVSMNLCGAIGSGISISISSLSGLGWSGGLGCWGILSLLTLFFWLPLIQNQHKSIRFVQTKKKVKSINLWHSKLAWNVTLFMGFQSLIFYTMITWLPEILEQKGLNTHEAGWMLSLMQFAMLPTTFIVSILAGRLKKQHSLVLVSVVLLIGGVFGILHGSTILIPIWIIMVGIGVGFAFSLAMMFFSLRTQDTNEAAELSGMAQSLGYLLSAIGPVLFGWLHDVTHNWNTSLLMLVLTSVIIFITGIGAGKNEYVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4B6</accession>
    <name>E3E4B6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">2-dehydropantoate 2-reductase</fullName>
            <ecNumber evidence="2">1.1.1.169</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Ketopantoate reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">apbA</name>
        <name evidence="5" type="ORF">PPSC2_12615</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(R)-pantoate + NADP(+) = 2-dehydropantoate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:16233"/>
            <dbReference type="ChEBI" id="CHEBI:11561"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15980"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.169"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; (R)-pantothenate biosynthesis; (R)-pantoate from 3-methyl-2-oxobutanoate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the ketopantoate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.169" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371260.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2689"/>
    <dbReference type="EnsemblBacteria" id="ADO56656">
        <property type="protein sequence ID" value="ADO56656"/>
        <property type="gene ID" value="PPSC2_12615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2679"/>
    <dbReference type="eggNOG" id="COG1893">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031468_0_0_9"/>
    <dbReference type="OMA" id="VVRWGQR"/>
    <dbReference type="OrthoDB" id="427052at2"/>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008677">
        <property type="term" value="F:2-dehydropantoate 2-reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003710">
        <property type="entry name" value="ApbA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013752">
        <property type="entry name" value="KPA_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013332">
        <property type="entry name" value="KPR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02558">
        <property type="entry name" value="ApbA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08546">
        <property type="entry name" value="ApbA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00745">
        <property type="entry name" value="apbA_panE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ApbA" evidence="3">
        <location>
            <begin position="3"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="ApbA_C" evidence="4">
        <location>
            <begin position="180"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="37280" checksum="76268A551F7FA444" modified="2011-01-11" version="1">MRIAILGAGSLGTIVGAYLAAGGMDVELIDAYKAHVDTLNQIGAKVVGTTEFQAKVKVIIPENKSGKYDLVLLLTKQLYNDSVLKELLPFLRDDSVVCSLQNGIPEKNVASIVGEERVIAGSVEFGATFIEPGVSSLTTEYTQFKKYAFQIGELNGEVTERIQRIKSALDLVGGTHISDNLVGTKWSKLLINNAFSGLSAALNGEYGDILDNEISIICAVHIADETIKIGHAKGVKFAKMGGFDIESLELRSENDIPERIQTSRVVMEPSRLLRASMLQDLEKKRKTEIDYINGVVPKMAEGTGISTPFNDLVVAQVKSAEESQTVPNFDTNLKAFKELLNSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4E1</accession>
    <name>E3E4E1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cycloinulo-oligosaccharide fructanotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">scrB1</name>
        <name evidence="7" type="ORF">PPSC2_12715</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371285.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00165"/>
    <dbReference type="CAZy" id="CBM38">
        <property type="family name" value="Carbohydrate-Binding Module Family 38"/>
    </dbReference>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56681">
        <property type="protein sequence ID" value="ADO56681"/>
        <property type="gene ID" value="PPSC2_12715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2704"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001528_2_0_9"/>
    <dbReference type="OMA" id="GFGHINV"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006558">
        <property type="entry name" value="LamG-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00560">
        <property type="entry name" value="LamGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="LamGL" evidence="6">
        <location>
            <begin position="470"/>
            <end position="619"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1333" mass="149571" checksum="FDD48982BF5DD247" modified="2011-01-11" version="1">MRKVKIGKCWILGMVIWAMVLQLVVPGISVASENRTVAGETHIPKNDVKSSVTDTIYQIKNIPKNDMGLSVPDSVYQIRNPGFETGDLTGWTVVKGDAFGPNSVTDETTWWAEKIPYNQEGAYHLNGWKYDESATGILHSSTFVLGGSGWISFRLGGAKNPDKVFINIVEVDTGQVIARYGNSAFADVGFPDPALGMRLANMVQYKADLSTYLGKKLYVEVVDNATSDWGVIFADAFSMYHESEPAEGFVATDIKPDFKRYEIDNPSFETGNLDGWTVEGDAFEVTDEAHASKEGNFYAKSSLQGKGSITSNTFTLQGTGTINFTVLDILKPENAYVALYDANSNTLLMKTGNVSANEKISWKVQEHYNKKLYVKVVDHSNEASIAVDSFQASGKGTIFYLNLDEGTGKKALEKVHNLKHDVNYVFNNARYMASKDPRWTPRGIKGGALLFDGYSNYIEVNANDTVPVSDALTIEAWVAPRSYEWGDGNKLSAIVNQSDQDKAEGFSLGMYRHGTWSMQVGIGGQWIQVWVKDHPLEKYKWNYVAATFSKEDGKIKLYLNGEEVASQVTPLNVPITPSTESLIIGKNNKPVELAGVFSFNMFSGLLDEVKLHNKALTNQEILAGYEGVKALHGGSIPKIPNADIDEDPSVFDGDQHRPQYHAMPPQNWMNEAHAPIYYNGKYHLFYQHNPQGPFWHQIHWGHWVSDDMVNWENVRPALVPEAGTLDPDGTWSGSAAYDRNGNPVLFYTAGNDSLSPNQRTGLATPADLSDPYLEKWVKYPKPVTEQNGKGIHNEFRDPFVWYDKEVDKWYQLVTSGLPDFSSGTALVYVSDDMYNWEYKGPLYVSDRSRYPELGTVWELPVLLPLGTDSTGKQKYIFMINPHEKPEHVPPANDVQRDVEVFYWIGTWDRDNFKFIPDQEAPSKMDVGDGYLTAESGLVTPDGRTVVFSMVQNVRTPQAEYQSGWAHNLSLPVSLSLDKHDKLHIEPIKELQSLRGKKWVDFSDKNLESANQLIKNVKGDMLEIVMEIDPREAQKFGLKVRRSEKGQEETLIYYDKKNGTFNVDRTKSSIDPDVRVDGIQGGYVDLKGENLKLHIFLDRSVIEAFANYKKKLTTRVYIGRYDSLGLQVWADGDINIKSMQVWDMNALTGKPAAPVYVPDKWDNSVYKDITELPNHDFATGDLTGWITEGDAFQNVHVTNTQFFWDNIYFNPSHKIPGGYHLWGFNEQAGGDSLTGSLRSQNFVLGGNGKINFLISGGRDIDRLYVALVRASDGKELFKETATNYEEYQRKIWDASDYIGEELYIKVVDQSKGGFGHINVDDFNVPVQVKKKTNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S8</accession>
    <name>E3E4S8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YpjA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypjA</name>
        <name evidence="2" type="ORF">PPSC2_14500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371654.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02155"/>
    <dbReference type="EnsemblBacteria" id="ADO57056">
        <property type="protein sequence ID" value="ADO57056"/>
        <property type="gene ID" value="PPSC2_14500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3094"/>
    <dbReference type="eggNOG" id="COG4347">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_103291_1_0_9"/>
    <dbReference type="OMA" id="TVYGYYW"/>
    <dbReference type="OrthoDB" id="1223056at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009845">
        <property type="entry name" value="DUF1405"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40042">
        <property type="entry name" value="PTHR40042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07187">
        <property type="entry name" value="DUF1405"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="17"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24924" checksum="A9AC07DA60E07AE4" modified="2011-01-11" version="1">MSLSYLWSRSFLTSRPFLWLLFWCNLVGTVYGYIWYGGQLEYTLNYHPMWQIVFVPDSPTASLFFTISIAFLLYPPHLKSLKVIRQIMEALAVVTSVKYGIWASAIILWGVAQGGTMVWQDWMLIASHTAMAVEALLFVRFFTCKWIALCLAALWTLLNDTMDYTFGIYPYLPRTLTDDVTQVRTFTYMLTLVSIVVAWLAMLARNRKVASHRDIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4T2</accession>
    <name>E3E4T2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglycerate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gpmB</name>
        <name evidence="1" type="ORF">PPSC2_14520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371658.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02175"/>
    <dbReference type="EnsemblBacteria" id="ADO57060">
        <property type="protein sequence ID" value="ADO57060"/>
        <property type="gene ID" value="PPSC2_14520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3098"/>
    <dbReference type="eggNOG" id="COG0406">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033323_8_4_9"/>
    <dbReference type="OMA" id="TRATMEI"/>
    <dbReference type="OrthoDB" id="1122642at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="22311" checksum="84C549E7853C1163" modified="2011-01-11" version="1">MLIGLIRHGLTDWNAVGKIQGHSDIPLNEEGRRQARLLAERLKEEPYHWDGLITSSLSRAKETGDIIASALHLPLLEPDDRLRERAYGQVEGMTQAEREEKWGVDWHLLDLGQESDADLQLRALAFMEALWTENRDKNLLVVSHGGFLANLYKALYQEKFTERIGNLSLSVLQREDADWEPLLYNCTKHLQEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U4</accession>
    <name>E3E4U4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 11">Anthranilate synthase component 1</fullName>
            <ecNumber evidence="5 11">4.1.3.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 14" type="primary">trpE</name>
        <name evidence="14" type="ORF">PPSC2_14575</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>chorismate + L-glutamine = anthranilate + H(+) + L-glutamate + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:21732"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <dbReference type="ChEBI" id="CHEBI:29748"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="4.1.3.27"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 1/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 11">Heterotetramer consisting of two non-identical subunits: a beta subunit (TrpG) and a large alpha subunit (TrpE).</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the anthranilate synthase component I family.</text>
    </comment>
    <dbReference type="EC" id="4.1.3.27" evidence="5 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371669.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02225"/>
    <dbReference type="EnsemblBacteria" id="ADO57072">
        <property type="protein sequence ID" value="ADO57072"/>
        <property type="gene ID" value="PPSC2_14575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3110"/>
    <dbReference type="eggNOG" id="COG0147">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006493_9_3_9"/>
    <dbReference type="OMA" id="GCVGYLD"/>
    <dbReference type="OrthoDB" id="1786019at2"/>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004049">
        <property type="term" value="F:anthranilate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="P:tryptophan biosynthetic process"/>
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        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005801">
        <property type="entry name" value="ADC_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019999">
        <property type="entry name" value="Anth_synth_I-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006805">
        <property type="entry name" value="Anth_synth_I_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005256">
        <property type="entry name" value="Anth_synth_I_PabB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015890">
        <property type="entry name" value="Chorismate_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11236">
        <property type="entry name" value="PTHR11236"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04715">
        <property type="entry name" value="Anth_synt_I_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00425">
        <property type="entry name" value="Chorismate_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00095">
        <property type="entry name" value="ANTSNTHASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56322">
        <property type="entry name" value="SSF56322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00564">
        <property type="entry name" value="trpE_most"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 11" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="10 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="Anth_synt_I_N" evidence="13">
        <location>
            <begin position="28"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Chorismate_bind" evidence="12">
        <location>
            <begin position="229"/>
            <end position="482"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00020653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU364045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF04715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO57072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="516" mass="58519" checksum="064E711184288C28" modified="2011-01-11" version="1">MLTPHVEQVIAMANEFNLIPVYKKVLADMETPIRIFRRYAERDRAFLLESVEGGEQWARHSFIGTDPFLMVSGKKGRLILEQHGKRQILSDKPIEALKALLRKYRSPKLKEMPPFTGGAIGFFGYDLLQYYEKLPEHSVDDLNMDDIRFMFCDQVIVFDHVKQQILLVGNVHIGEGFREEDIRAAYADVERKLENTAQYLRKQSPPERLGSASIPDDVELGEIQSNVTKEQFISNVEQAKEYIRSGDIFQVVLSQRFHIDTEASPLQVYRVLRTMNPSPYMYYLKMDDEIIVGTSPEALVKVENGRVETRPIAGTRPRGVTETEDAALAEELLKDEKERAEHLMLVDLGRNDLGRVSQFGTVKCDTFMEIERYSHVMHIVSNVSGELREDKDFFDAFLSCLPAGTVSGAPKLRAMEIIAELEREARGTYAGAIGYLGFSGNMDACITIRTIVFKKNRAYVQAGAGIVWDSVPESEYQETVNKAKALLKAIRTAEAMFPATTQPYNSVINQDYLYTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U8</accession>
    <name>E3E4U8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-glutamate O-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.80</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cheR3</name>
        <name evidence="7" type="ORF">PPSC2_14595</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-glutamyl-[protein] + S-adenosyl-L-methionine = [protein]-L-glutamate 5-O-methyl ester + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:24452"/>
            <dbReference type="Rhea" id="RHEA-COMP:10208"/>
            <dbReference type="Rhea" id="RHEA-COMP:10311"/>
            <dbReference type="ChEBI" id="CHEBI:29973"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:82795"/>
            <dbReference type="EC" id="2.1.1.80"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.1.1.80" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371673.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02245"/>
    <dbReference type="EnsemblBacteria" id="ADO57076">
        <property type="protein sequence ID" value="ADO57076"/>
        <property type="gene ID" value="PPSC2_14595"/>
    </dbReference>
    <dbReference type="GeneID" id="66577061"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3114"/>
    <dbReference type="eggNOG" id="COG1352">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025854_1_1_9"/>
    <dbReference type="OMA" id="EWQEFVN"/>
    <dbReference type="OrthoDB" id="1378151at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.155.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022642">
        <property type="entry name" value="CheR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000780">
        <property type="entry name" value="CheR_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022641">
        <property type="entry name" value="CheR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036804">
        <property type="entry name" value="CheR_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01739">
        <property type="entry name" value="CheR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03705">
        <property type="entry name" value="CheR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00996">
        <property type="entry name" value="CHERMTFRASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00138">
        <property type="entry name" value="MeTrc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50123">
        <property type="entry name" value="CHER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CheR-type methyltransferase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="30612" checksum="DEC82606A6A58F7C" modified="2011-01-11" version="1">MTDLELGQTDPDYTAFIRKIKDSTGIDLAQYKEAQMKRRLTTLRNKNGFPSFVSFYDAMMKEKPLFYEFLDRMTINVSEFWRNPNRWEVLRDIILPQLLVGKQKLKLWSAACSTGEEPYSLAMVLDGKGILGNCSITASDIDDGALAKAKEGKYLERSLKDVPEQVASKYFKPDGAMYRIDDRLKQAVKFQKQNLLLDRFEDGYDLIICRNVMIYFTEEAKHALYQKFAASLRPGGVLFVGSTEQIFSPNQYGLESTETFFYRKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E571</accession>
    <name>E3E571_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage mu protein f</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqbB3</name>
        <name evidence="2" type="ORF">PPSC2_16270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372017.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3475"/>
    <dbReference type="EnsemblBacteria" id="ADO57431">
        <property type="protein sequence ID" value="ADO57431"/>
        <property type="gene ID" value="PPSC2_16270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3473"/>
    <dbReference type="eggNOG" id="COG2369">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1007761_0_0_9"/>
    <dbReference type="OMA" id="MKLNTHE"/>
    <dbReference type="OrthoDB" id="1221841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006528">
        <property type="entry name" value="Phage_head_morphogenesis_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04233">
        <property type="entry name" value="Phage_Mu_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phage_Mu_F" evidence="1">
        <location>
            <begin position="152"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="30300" checksum="DAC2D5104633CAF9" modified="2011-01-11" version="1">MCESCWALIAKADDDEFLDSLELSYVERKVLEELYKQGEDRITEILELQGQALHDAISELSEDALGDIGELGKVLIALHTTDVFAELFEQAIQEAFEPLFHLAGETELSALDKEKVWSTSNKAAGRFTKKLKKLVPDMNKASTDVLLRSFGKAIEEGATPSERALLVQEVSAQAASGEDGPFSMQRAQRVSRTMSTAAANGGKLEGWKQSEIAKGKKWRSAAGTRTRKSHRKANGQVVPLDEPFKVGDSKLMYPGDPSGEAKEIVNCRCTLQLVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5A0</accession>
    <name>E3E5A0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YqaJ3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yqaJ3</name>
        <name evidence="3" type="ORF">PPSC2_16395</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372046.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3504"/>
    <dbReference type="EnsemblBacteria" id="ADO57460">
        <property type="protein sequence ID" value="ADO57460"/>
        <property type="gene ID" value="PPSC2_16395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3501"/>
    <dbReference type="eggNOG" id="COG5377">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049574_1_1_9"/>
    <dbReference type="OMA" id="QVMHQLA"/>
    <dbReference type="OrthoDB" id="1563636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011604">
        <property type="entry name" value="PDDEXK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017482">
        <property type="entry name" value="Phage_endonuclease_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019080">
        <property type="entry name" value="YqaJ_viral_recombinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09588">
        <property type="entry name" value="YqaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03033">
        <property type="entry name" value="phage_rel_nuc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YqaJ" evidence="2">
        <location>
            <begin position="16"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="238"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="315" mass="35559" checksum="8D1E7A779908E83C" modified="2011-01-11" version="1">MAMNVAAVTKGIERDEWLKLRKRGIGGSDASAVAGLNRYKSPVGVFLEKTDQIVPDEPGEAAYWGNQLENLVAREFMNQTGLRVQRSNKMYQHPTHKFMLGNVDRLILDKGGRGLGILECKTASAYKLSEWADDQVPDEYAIQLQHYMAVLGVDYGYFAVLIGGQKFQYKLVERNEGIIESLIQIEDEFWNKHVIPRVPPMVDGSAASTELLNRLYPASRPATEITLEKDQALLVDKLIAAKEDAKVAEEQVKRLENELKATIGENEVATYNGEPLVTWKSSQTTRLDTKRLKQEQPHIFEKYANTTSSRRFLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5B5</accession>
    <name>E3E5B5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">Orotate phosphoribosyltransferase</fullName>
            <shortName evidence="4">OPRT</shortName>
            <shortName evidence="4">OPRTase</shortName>
            <ecNumber evidence="2 4">2.4.2.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">pyrE</name>
        <name evidence="6" type="ORF">PPSC2_16470</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>diphosphate + orotidine 5'-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + orotate</text>
            <dbReference type="Rhea" id="RHEA:10380"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57538"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="1 4">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.10" evidence="2 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372061.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03805"/>
    <dbReference type="EnsemblBacteria" id="ADO57475">
        <property type="protein sequence ID" value="ADO57475"/>
        <property type="gene ID" value="PPSC2_16470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3516"/>
    <dbReference type="eggNOG" id="COG0461">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074878_1_1_9"/>
    <dbReference type="OMA" id="ENPFTWA"/>
    <dbReference type="OrthoDB" id="1280396at2"/>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00119"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004588">
        <property type="term" value="F:orotate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01208">
        <property type="entry name" value="PyrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023031">
        <property type="entry name" value="OPRT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004467">
        <property type="entry name" value="Or_phspho_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00336">
        <property type="entry name" value="pyrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 4" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="5">
        <location>
            <begin position="56"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phosphoribose 1-diphosphate binding" evidence="4">
        <location>
            <begin position="126"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>orotate</name>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="23410" checksum="773C41F6BECA957D" modified="2011-01-11" version="1">MTTLHNIPEQIASHLLRIQAVALRPQQPFTWTSGIKSPIYCDNRLTMSYPEVRELIADSFAAIIREQYPETEVIAGTATAGIPHAAWVAQKLNLPMAYVRDKAKGHGKENQIEGRISAGQKVMVIEDLISTGGSSIKAAQAVEQAGAQPLAVLAIFSYQLDKATQAFEEAGVKLQTLSNYTALMEVALREGTIQEEEMELLRSWRQDPASFGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N0</accession>
    <name>E3E5N0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4261 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372486.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57907">
        <property type="protein sequence ID" value="ADO57907"/>
        <property type="gene ID" value="PPSC2_18450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3955"/>
    <dbReference type="eggNOG" id="COG3779">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_098595_0_0_9"/>
    <dbReference type="OMA" id="EDGYYSC"/>
    <dbReference type="OrthoDB" id="1082018at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025357">
        <property type="entry name" value="DUF4261"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14080">
        <property type="entry name" value="DUF4261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4261" evidence="1">
        <location>
            <begin position="157"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="247" mass="27781" checksum="60ECAF6497336E80" modified="2011-01-11" version="1">MSLPKIILGIPGYWETRDEFIEAMARKGNGFIYAGSHIGNLNKPKDFFDVEMSEYNPYVAEAFEVAGNGSFKREHIDQLNEHKSIVYLLGEGGSIEKVLDIMEVASAVLHAGGMAVNVESSGRASTKEEWLGLTSSRDIAQVFTAFIQMSREENTFYTTGMHSFGYPDVQTTSEDITGSEVSTLFRIFCLYNLVEAPKITNGETFSTDPSSPIYLLKHKECTMFEEEDPFYNPFGVWNLIRNHRPIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E603</accession>
    <name>E3E603_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372794.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4272"/>
    <dbReference type="EnsemblBacteria" id="ADO58222">
        <property type="protein sequence ID" value="ADO58222"/>
        <property type="gene ID" value="PPSC2_19990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4259"/>
    <dbReference type="eggNOG" id="ENOG502ZCWW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108354_0_0_9"/>
    <dbReference type="OMA" id="MTQKFAY"/>
    <dbReference type="OrthoDB" id="1738712at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="25664" checksum="03122F7D32E13934" modified="2011-01-11" version="1">MFMSDSRALFEKNMKLYPVNRIRSNVIILVLLLLDLFLTIPLIGNPYIAVYVYVLMPPIVLINIWALVLVIMPRKLQLNYILFRGVFGLVCSIGFMIMTQKFAYGMLGLDTPWYFISSFAAYGIALYCYIKYHLAKFKNPSTYKKEPKVKKKHKREAVVTMTTFTGAGYLIANLSLGFATQQFVATVLMCVYSMLAFVLFHFIMELHRYYWLHKLRNQTAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H0</accession>
    <name>E3E6H0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">tRNA-specific 2-thiouridylase MnmA</fullName>
            <ecNumber evidence="7">2.8.1.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mnmA</name>
        <name evidence="8" type="synonym">trmU</name>
        <name evidence="8" type="ORF">PPSC2_19050</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H(+) + L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:47032"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11726"/>
            <dbReference type="Rhea" id="RHEA-COMP:11727"/>
            <dbReference type="Rhea" id="RHEA-COMP:11728"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61963"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:87170"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.8.1.13"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MnmA/TRMU family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.13" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58039.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886038.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06260"/>
    <dbReference type="EnsemblBacteria" id="ADO58039">
        <property type="protein sequence ID" value="ADO58039"/>
        <property type="gene ID" value="PPSC2_19050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4082"/>
    <dbReference type="eggNOG" id="COG0482">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035188_1_0_9"/>
    <dbReference type="OrthoDB" id="1054741at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016783">
        <property type="term" value="F:sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01998">
        <property type="entry name" value="tRNA_Me_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.280">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00144">
        <property type="entry name" value="tRNA_thiouridyl_MnmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023382">
        <property type="entry name" value="Adenine_a_hdrlase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004506">
        <property type="entry name" value="tRNA-specific_2-thiouridylase"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00420">
        <property type="entry name" value="trmU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2 7" id="KW-0820">tRNA-binding</keyword>
    <feature type="region of interest" description="Interaction with target base in tRNA" evidence="7">
        <location>
            <begin position="101"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="region of interest" description="Interaction with tRNA" evidence="7">
        <location>
            <begin position="152"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Interaction with tRNA" evidence="7">
        <location>
            <begin position="315"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine persulfide intermediate" evidence="7">
        <location>
            <position position="202"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="15"/>
            <end position="22"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Interaction with tRNA" evidence="7">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with tRNA" evidence="7">
        <location>
            <position position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58039.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="375" mass="41963" checksum="674C32E8BFDC466B" modified="2015-05-27" version="2">MTMAKANHETRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGRCTAEEDAEDVRRVCEQIDIPYYTVNFEKEYFDKVFSYFLDEYKAGRTPNPDVMCNREIKFGEFLNKALDLGADYVATGHYARVVEEDGRFTLLRGVDSNKDQTYFLNALSQAQLSRTMFPIGHLPKPEVRRIAEAAGLYTAKKKDSTGVCFIGERNFKEFLSGYLPAKGGDMVDIATGEVKGRHDGLMYYTLGQRQGLGIGGSGSGEPWFVADKDLEKNILYVVQGDRHHSLYSTSLIATDVNWIEGADARPSGEFRCTAKFRYRQPDQQVTLQWLPDGTVHVVFDIHQKAITPGQAVVFYDGERCLGGGTIDKVEKLQPETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6J5</accession>
    <name>E3E6J5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58255.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324683.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07385"/>
    <dbReference type="EnsemblBacteria" id="ADO58255">
        <property type="protein sequence ID" value="ADO58255"/>
        <property type="gene ID" value="PPSC2_20135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4291"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037420_0_0_9"/>
    <dbReference type="OrthoDB" id="635734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="452"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="476"/>
            <end position="549"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58255.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="549" mass="62445" checksum="6775E01F8DDB7C26" modified="2015-05-27" version="2">MMLFSHVSNVRSITGAEKLLLHFCLDMRTYFDCILVTPGEGRLTSMARKRGIAVQTQNLFMLHGMYTPYEGLAQDAENLRNHVAYAPLHQMLRHARPDVVLVNTCVNVMPAMVAQELNIPVIWKITEVINQNAHTPISVSIIERYSQWVIGISQAVMRPLHGGGLTRPHTMLPPCRDMNMPSPKEYVLERRRKREKLGLRDFHICIGYISSFIYEAKGLLPFVHMALKLCETNSRCRFWIIGSSVDSEYYVKCISLIRQSRYSRRFQFSSFEESVSTAYSAMDIVVIPSMVEEGFGMTALEGLVYGKPVVAFAQGGLVELMEATGNADFLVEPGNSDMLAQKVGYLLDHSEEAERIGVRNNSAATRVYGPDSYRSSLHVMVSQWVCHHPHWFPLIQQPGGPVWTREGEGLRQVTAIPEAYLNTVREFPESVVNQLPVLGLPPIEYAAIQGLPQPVPSLPEPPSELPRRKRSIRARCPKGHKHTRLRSRRYKRSAGRSRLKKIHGSPLYRKSKSRQKLKRKFKLQSRRSKAHKQKRVTLKARQHSKQRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L0</accession>
    <name>E3E6L0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Neutral metalloproteinase</fullName>
            <ecNumber evidence="9">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">npr</name>
        <name evidence="14" type="ORF">PPSC2_20195</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <reference evidence="16" key="2">
        <citation type="journal article" date="2013" name="Acta Crystallogr. D" volume="69" first="24" last="31">
            <title>Structure of gentlyase, the neutral metalloprotease of Paenibacillus polymyxa.</title>
            <authorList>
                <person name="Ruf A."/>
                <person name="Stihle M."/>
                <person name="Benz J."/>
                <person name="Schmidt M."/>
                <person name="Sobek H."/>
            </authorList>
            <dbReference type="PubMed" id="23275160"/>
            <dbReference type="DOI" id="10.1107/S0907444912041169"/>
        </citation>
        <scope>X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 289-592 IN COMPLEX WITH CALCIUM AND ZINC</scope>
    </reference>
    <comment type="function">
        <text evidence="9">Extracellular zinc metalloprotease.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the peptidase M4 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372842.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="PDB" id="4B52">
        <property type="method" value="X-ray"/>
        <property type="resolution" value="1.76 A"/>
        <property type="chains" value="A/B=289-592"/>
    </dbReference>
    <dbReference type="PDBsum" id="4B52"/>
    <dbReference type="SMR" id="E3E6L0"/>
    <dbReference type="STRING" id="1406.LK13_07445"/>
    <dbReference type="MEROPS" id="M04.018"/>
    <dbReference type="EnsemblBacteria" id="ADO58270">
        <property type="protein sequence ID" value="ADO58270"/>
        <property type="gene ID" value="PPSC2_20195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4304"/>
    <dbReference type="eggNOG" id="COG3227">
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    <sequence length="592" mass="63603" checksum="27B96B6EA81B604F" modified="2011-01-11" version="1">MKKVWVSLLGGAMLLGSVASGASAESSVSGPAQLTPTFHAEQWKAPTSVSGDDIVWSYLNRQKKSLLGVDSSSVREQFRIVDRTSDKSGVSHYRLKQYVNGIPVYGAEQTIHVGKSGEVTSYLGAVVNEDQQAEATQGTTPKISASEAVYTAYKEAAARIEALPTSDDTISKDAEEPSSVSKDTYAEAANNEKTLSVDKDELSLDQASVLKDSKIEAVEPEKSSIAKIANLQPEVDPKAELYYYPKGDDLLLVYVTEVNVLEPAPLRTRYIIDANDGSIVFQYDIINEATGTGKGVLGDSKSFTTTASGSSYQLKDTTRGNGIVTYTASNRQSIPGTILTDADNVWNDPAGVDAHAYAAKTYDYYKAKFGRNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAFSGDPDVVGHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQRKNWLVGDDIYTPNIAGDALRSMSNPTLYDQPDHYSNLYRGSSDNGGVHTNSGIINKAYYLLAQGGNFHGVTVNGIGRDAAVQIYYSAFTNYLTSSSDFSNARAAVIQAAKDLYGANSAEATAAAKSFDAVGVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L9</accession>
    <name>E3E6L9_PAEPS</name>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
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            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
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        <subcellularLocation>
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            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
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    <keyword evidence="12 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0547">Nucleotide-binding</keyword>
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    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
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    <keyword evidence="10 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="11" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
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        </source>
    </evidence>
    <sequence length="425" mass="48032" checksum="E4BF702FCFE78B9E" modified="2011-01-11" version="1">MLVDKLLVNIFLVFVPLLVYSALSDHRHRKHTPLLMGGVLGVSSVLCLMFSYIWYGLYWDLRYVPLILSVLYFGPTAGLMNVTLMVMARMYVGPESMVVGLPSMMLCYLGPLLVRNKFMQLKSMLLRVGMNMVMSIWITGVMLIFLLIHSWINGRLDEDEIELIRSILWFGVIQFLSIGASSFWMEFSLEREEMRRKIKYAERLNTLGELAASMAHEVRNPLTVVKGFLQMVQSGLEGKNRRYVALALAEVDRAERIISDYLNLSRPQIGNTERMDLSGMVQQIVLLLKPMANKQGVRLYTELRNEIYIHTDRNQLLQALIHVTKNAIEAAEDGGRVYIKLTVQEEQACLSIRDTGKGMSQEHLERVGTLFFSTKEVGTGLGTVVSFRIIEAMNGSIRYESEPGVGTEVVILLPLAQESLLAAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6P8</accession>
    <name>E3E6P8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 4">Thioredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">trxA7</name>
        <name evidence="7" type="ORF">PPSC2_20355</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the thioredoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_010347861.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07610"/>
    <dbReference type="EnsemblBacteria" id="ADO58308">
        <property type="protein sequence ID" value="ADO58308"/>
        <property type="gene ID" value="PPSC2_20355"/>
    </dbReference>
    <dbReference type="GeneID" id="66575986"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4341"/>
    <dbReference type="eggNOG" id="COG3118">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090389_10_2_9"/>
    <dbReference type="OMA" id="QVGVAPK"/>
    <dbReference type="OrthoDB" id="1630944at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000077">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01068">
        <property type="entry name" value="thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3 5" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="6">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="5">
        <location>
            <begin position="30"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00020570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000077-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="11321" checksum="3F3FBF612ECAE860" modified="2011-01-11" version="1">MAIVNVSDQSFNAEVEGTGTVLVDFWAPWCGPCKMIAPILEDLSTEVGDSVKIAKVNVDENPESASRFGVMSIPTLIVFKDGQPVDKVVGLNSKEALKSMLTKHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E720</accession>
    <name>E3E720_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7 8">Elongation factor Tu</fullName>
            <shortName evidence="7">EF-Tu</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">tuf</name>
        <name evidence="10" type="ORF">PPSC2_22445</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373267.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09910"/>
    <dbReference type="EnsemblBacteria" id="ADO58723">
        <property type="protein sequence ID" value="ADO58723"/>
        <property type="gene ID" value="PPSC2_22445"/>
    </dbReference>
    <dbReference type="GeneID" id="66575578"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4758"/>
    <dbReference type="eggNOG" id="COG0050">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007265_0_1_9"/>
    <dbReference type="OMA" id="TTHIEYE"/>
    <dbReference type="OrthoDB" id="621774at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01884">
        <property type="entry name" value="EF_Tu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03697">
        <property type="entry name" value="EFTU_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00118_B">
        <property type="entry name" value="EF_Tu_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041709">
        <property type="entry name" value="EF-Tu_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033720">
        <property type="entry name" value="EFTU_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004541">
        <property type="entry name" value="Transl_elong_EFTu/EF1A_bac/org"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004160">
        <property type="entry name" value="Transl_elong_EFTu/EF1A_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03143">
        <property type="entry name" value="GTP_EFTU_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="SSF50465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00485">
        <property type="entry name" value="EF-Tu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7 10" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="9">
        <location>
            <begin position="10"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="19"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="81"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="136"/>
            <end position="139"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="396" mass="43331" checksum="CB9D5B381067A816" modified="2011-01-11" version="1">MAKAKFERNKPHVNIGTIGHVDHGKTTLTAAITTVLSKTYGGAAVAFDQIDKAPEERERGITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVEDEELLELVEMEVRDLLSEYDFPGDDTPITRGSAREALQNPDGDWAKKIVEMFETIDTYIPTPERDTDKPFLMPVEDVFSITGRGTVATGRVERGTVKVGDEIEIIGIQEESRKSVVTGVEMFRKLLDSAQAGDNIGALLRGVDRAQIERGQVLAKPGSVNPHTEFSAQIYVLTKEEGGRHKPFFTGYRPQFYFRTTDVTGIITLPEGSEMVMPGDNITVTVQLISPIAIEEGTKFSIREGGRTVGAGAVATISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E723</accession>
    <name>E3E723_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">30S ribosomal protein S7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">rpsG</name>
        <name evidence="10" type="ORF">PPSC2_22455</name>
        <name evidence="11" type="ORF">PPSC2_28060</name>
    </gene>
    <organism evidence="10 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="11 12">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="10 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 12">SC2</strain>
            <plasmid evidence="11 12">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the universal ribosomal protein uS7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432586.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09920"/>
    <dbReference type="EnsemblBacteria" id="ADO58725">
        <property type="protein sequence ID" value="ADO58725"/>
        <property type="gene ID" value="PPSC2_22455"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59398">
        <property type="protein sequence ID" value="ADO59398"/>
        <property type="gene ID" value="PPSC2_28060"/>
    </dbReference>
    <dbReference type="GeneID" id="66575576"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22455"/>
    <dbReference type="KEGG" id="ppm:PPSC2_28060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4760"/>
    <dbReference type="eggNOG" id="COG0049">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072226_1_1_9"/>
    <dbReference type="OMA" id="NVMPHVE"/>
    <dbReference type="OrthoDB" id="1540940at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.455.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00480_B">
        <property type="entry name" value="Ribosomal_S7_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000235">
        <property type="entry name" value="Ribosomal_S5/S7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005717">
        <property type="entry name" value="Ribosomal_S7_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020606">
        <property type="entry name" value="Ribosomal_S7_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023798">
        <property type="entry name" value="Ribosomal_S7_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036823">
        <property type="entry name" value="Ribosomal_S7_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11205">
        <property type="entry name" value="PTHR11205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00177">
        <property type="entry name" value="Ribosomal_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002122">
        <property type="entry name" value="RPS7p_RPS7a_RPS5e_RPS7o"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47973">
        <property type="entry name" value="SSF47973"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01029">
        <property type="entry name" value="rpsG_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00052">
        <property type="entry name" value="RIBOSOMAL_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0614">Plasmid</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6 8" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="6" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_S7" evidence="9">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003620"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="156" mass="17822" checksum="372CC29D8B85B097" modified="2011-01-11" version="1">MPRKGPVTKRDVLPDPVYNSKLVTRLINRIMLDGKRGVAQSILYNAFKLIQERTGNDPMEVFEAAIKNIMPVLEVKARRVGGANYQVPIEVKPERRTSLGLRWLVNYSRNRGEKTMEERLAAEIIDASNNTGASVKKREDTHKMAEANKAFAHYRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7F1</accession>
    <name>E3E7F1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bacitracin ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">potA3</name>
        <name evidence="5" type="ORF">PPSC2_24485</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373695.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5225"/>
    <dbReference type="EnsemblBacteria" id="ADO59162">
        <property type="protein sequence ID" value="ADO59162"/>
        <property type="gene ID" value="PPSC2_24485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5187"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="YNHLLAM"/>
    <dbReference type="OrthoDB" id="1833499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="5"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="308" mass="35056" checksum="679B827DAEBC0125" modified="2011-01-11" version="1">MQYVIETKKLRKQFGMSVAVDDISLHVERGSIYGFLGENGAGKTTTIRMLMRLIEPTSGEVFLFGERLEKNYPSIFSKIGTIIETPGLYENLSARDNLRICCKYMGMKDDGRIERTLTTVGLEHTGKKKFKDFSLGMKQRLGIARALVHDPELLILDEPTNGLDPSGIKEIRQLLKRLCEEDGKTILISSHILSEIQQLATHIGIIHNGKLLAEDRLSRLEEGFEQYTDVKVDDAEAVQAFLQEHMKQLQSNVISPQQLRIHSQIENTAALNKQLIDHQFSVYEIHTTKQTLEEYFLTLISEEGERHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7H9</accession>
    <name>E3E7H9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373723.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5253"/>
    <dbReference type="EnsemblBacteria" id="ADO59190">
        <property type="protein sequence ID" value="ADO59190"/>
        <property type="gene ID" value="PPSC2_24615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5215"/>
    <dbReference type="eggNOG" id="ENOG5030V5I">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1439777_0_0_9"/>
    <dbReference type="OMA" id="HEYRFSH"/>
    <dbReference type="OrthoDB" id="1240891at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="22066" checksum="DC8AD2045C9E37B5" modified="2011-01-11" version="1">MIGTDTTQDMVLELQDEMSQYQYQFGVRRNDFLVEAMSYGMSEEEARAYAIQRIGPVVPVTCIPTLALGKVRPLSPMLAARYQYAGDWKDIHEHLLLPDEVLRIAGTQHFRSWISDMRNYWVESAPYRFGDDRLSLLSVASEKEGHFSMLVWREPGEEPEVWTYASQHEYRFSHLLHWFKWLNGRSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7J6</accession>
    <name>E3E7J6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ywjA</name>
        <name evidence="10" type="ORF">PPSC2_13285</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371404.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E7J6"/>
    <dbReference type="STRING" id="1406.LK13_00975"/>
    <dbReference type="EnsemblBacteria" id="ADO56801">
        <property type="protein sequence ID" value="ADO56801"/>
        <property type="gene ID" value="PPSC2_13285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2831"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="IMAWNSS"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
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    <sequence length="571" mass="64375" checksum="4CC60368C05A542F" modified="2011-01-11" version="1">MLKRFFEYYRPYRTLFIIDFTCAILAALLELAFPLAVNRVVDDLLPSGNWKWILFACLALLAIYVVSAGLNYVVTYWGHKLGINIESDMRKKLFDRVQKQSFRFFDNNKTGHLVSRMTNDLMDIGEIAHHGPEDLFIALMTLGGAFGIMLSINWKLAVLTFIIVPLMIYLSLYFSRKMNAAFHRMFSDIADYNARIENNVSGIRVVQAFSNEAHEMERFAENNGRFRKTKLIAYRIMAWNSSISFILMKLVSLFVLVCGTWFVIEGQMSYGEFIAFVMLSNVFLAPIKQINSVIETYPKGIAGFRRYLDLLESESDVEDLPGAKTVKHLKGDIQFEGVTFGYENKDKVLHRVDLSIHAGETVALVGPSGAGKTTLCSLLPRFYDVEEGSITIDGMDIREMKLDSLRSMIGIVQQDVFLFDGSIRENIAYGKLDASENEIWDAARRAQIEELVRSYPEGLDTMIGERGVKLSGGQKQRLSIARMFLKNPPILILDEATSALDTETEAAIQQALTELSQGRTTLVIAHRLATIKNADRIIVVADQGIAEQGKHEELMAVKGAYSRLHQAQYGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7W3</accession>
    <name>E3E7W3_PAEPS</name>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
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        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
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    <sequence length="499" mass="53745" checksum="A37EE33B061F0F08" modified="2011-01-11" version="1">MKKFGFLLLLFVFMWAVPGYGHAASSGTQIYLDDQQLSVPSGAKAQVIGGSTMVPLRVISENLGYDVTWKQQARTITIEKDSTLIRMIIGSKTATVNGSDISLDASPLLRSNYALVPLRFIGEQMGLDVKWDSSSKSVKLYTRNSGSGNGEFTPPKSGNNSTGTGSVTAPTNNASSGVTQVQGVSFSQNRLTITTAGAVKPKAFTMTGPDRVVVDLPATAFADNFGDQQKLDSNLNGSLDIENEADVSGIRYALFQKEPSTVRVVIDLKHAMNYTAYNDGSNRVIVDLASKDSVNTTPDATLPDGSEPDDTQTSPVNSNGKKVVVIDAGHGAKDSGAVGISRKNYEKTFNLAMALKVESILKQNPKLEVVLTRSNDTFLELKQRVKVAENLKANVFVSIHANSSGSSASNGTETYYQRSASKAFANVMHKYFAPATGLTDRGIRYGNFHVIRETTMPAVLLEVGYLSNAKEEATLFDEDFQNRVAQGIADGITEYLDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7W5</accession>
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                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
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                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="gene ID" value="PPSC2_14210"/>
    </dbReference>
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    </dbReference>
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        <property type="component" value="Chromosome"/>
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    </dbReference>
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        <location>
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            <end position="27"/>
        </location>
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            <begin position="28"/>
            <end position="524"/>
        </location>
    </feature>
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            <begin position="399"/>
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            <begin position="144"/>
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        </location>
    </feature>
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            <begin position="144"/>
            <end position="183"/>
        </location>
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        </source>
    </evidence>
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        </source>
    </evidence>
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    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO56998.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="524" mass="56856" checksum="F225546DBFF1AA52" modified="2011-01-11" version="1">MKKYGWVILAAILIWLWPSSPHVNAAGAELFLDGKRVEAPAGAKPEMVNGKIMVPLRVVGEQLGYQFKWEPQAYKISIQKNSTDMSMYVGRTSADVNGKTVSLDAPPVLRGSSTMVPLRFVGEQMGLKVDWNNQNKSVNLSQKIATQPADKQSQSQQPSQTSTQSTKSTNKTSTATATTITPVEADKHTEAVPSTAKEQNVEQTTTNAVLVQNISFENETLKISLNKDLTPKVSKMTGPDRIVVDLPETSLSTDLLQSFPVRKDGTRALVNSYSEDVQEIRFAPADGTKGGARIVIALNKARDYDLSTNGIGDITLQLRERSVNPEIVAPTNVEGRRIVVIDPGHGGKDPGAGSVTGRHEKEFTLAVALKVQQLAQNDPDIQIVLTRNGDTYPTLDERPQLANNQQASVFVSIHGNSMPTSNNGKANGSETYYARQESLSLATIMHKHLVAATEFKDNGIKVANHVVTRKSQMPAVLLECGYLSNLSNEAAMFTEETQQKIAEGIVDGLKEYLGTGTGVTESLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E837</accession>
    <name>E3E837_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stage II sporulation protein M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoIIM</name>
        <name evidence="2" type="ORF">PPSC2_14935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371743.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02570"/>
    <dbReference type="EnsemblBacteria" id="ADO57150">
        <property type="protein sequence ID" value="ADO57150"/>
        <property type="gene ID" value="PPSC2_14935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3186"/>
    <dbReference type="eggNOG" id="COG1300">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_085980_0_0_9"/>
    <dbReference type="OMA" id="QDLYYYL"/>
    <dbReference type="OrthoDB" id="2040857at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014196">
        <property type="entry name" value="SpoIIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002798">
        <property type="entry name" value="SpoIIM-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01944">
        <property type="entry name" value="SpoIIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038973">
        <property type="entry name" value="SpoIIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02831">
        <property type="entry name" value="spo_II_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="217" mass="23973" checksum="237A97058CBB467E" modified="2011-01-11" version="1">MQWFRHTLKDQTPYYVFLAVLFLVGVVFGALMVNALSLEQLQDLSRYLKDFFVTVNQNKQGFADSQAASTFWDSVSLHLKWVGLIWVCGLSVIGLPGILVLNFLKGVLIGFSVGYMVGQYSWKGLLFSLVSVAPHNLLVIPVLLVCSVAAMTFSIHMIKTKILATRPSDGMLRPLLSYAGLTAVMMVLLIGSASFETWVTPVMMQWVTPMLTASVTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E884</accession>
    <name>E3E884_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YlbB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ylbB</name>
        <name evidence="3" type="ORF">PPSC2_15535</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371865.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03185"/>
    <dbReference type="EnsemblBacteria" id="ADO57276">
        <property type="protein sequence ID" value="ADO57276"/>
        <property type="gene ID" value="PPSC2_15535"/>
    </dbReference>
    <dbReference type="GeneID" id="66576873"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3318"/>
    <dbReference type="eggNOG" id="COG0517">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040681_12_0_9"/>
    <dbReference type="OMA" id="YGICELC"/>
    <dbReference type="OrthoDB" id="2014094at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="8"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="75"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="15284" checksum="43D12EAF5E33A001" modified="2011-01-11" version="1">MKKVQEVMTKKCVTVTPQDNIYEIAVKMKDNDTGFIPVVESEGSDKLIGVVTDRDLVIRGYAAKNSGSGSVDTVMTTGIRTASADMSVDQAAELMAEQQIRRLPVTEGDRLIGIVSIGDLAVRNIFADNAGEALSQISEQVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E887</accession>
    <name>E3E887_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqhY3</name>
        <name evidence="2" type="ORF">PPSC2_15550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the asp23 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013310912.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03200"/>
    <dbReference type="EnsemblBacteria" id="ADO57279">
        <property type="protein sequence ID" value="ADO57279"/>
        <property type="gene ID" value="PPSC2_15550"/>
    </dbReference>
    <dbReference type="GeneID" id="66576870"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3321"/>
    <dbReference type="eggNOG" id="COG1302">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113198_4_2_9"/>
    <dbReference type="OMA" id="DGVHAMG"/>
    <dbReference type="OrthoDB" id="2035639at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005531">
        <property type="entry name" value="Asp23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34297">
        <property type="entry name" value="PTHR34297"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03780">
        <property type="entry name" value="Asp23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="12883" checksum="606D3820DC2B16C7" modified="2011-01-11" version="1">MAEQIQQLEAGNIKISNDVVGKIAGMAALETPGIAAMSGGLSEGWAKRLSGKNVQKGVSVEVGQLEAAIDLRIIVLYETPIHEVSRILQQNVREAVESMTGLRVVEVNVKVEGVAFKDDAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E889</accession>
    <name>E3E889_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0358 protein PPSC2_15560</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_15560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0358 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007431028.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03210"/>
    <dbReference type="EnsemblBacteria" id="ADO57281">
        <property type="protein sequence ID" value="ADO57281"/>
        <property type="gene ID" value="PPSC2_15560"/>
    </dbReference>
    <dbReference type="GeneID" id="66576868"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3323"/>
    <dbReference type="eggNOG" id="COG4838">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_160493_1_0_9"/>
    <dbReference type="OMA" id="KLIQVQM"/>
    <dbReference type="OrthoDB" id="2000470at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.750">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01560">
        <property type="entry name" value="UPF0358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009983">
        <property type="entry name" value="UPF0358"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036270">
        <property type="entry name" value="UPF0358_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07408">
        <property type="entry name" value="DUF1507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140404">
        <property type="entry name" value="SSF140404"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="10984" checksum="BF16CF1B0DEAA6E2" modified="2011-01-11" version="1">MTSSDLQEQLNIKAINLLQEDADKIKKLIEVQMENLATRYCPLYEEVLDTQMYGFSKEVDFAVRAGLLPEMVGKQLVSELERNLAILYEAMNNKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G1</accession>
    <name>E3E8G1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Stage V sporulation protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spoVD</name>
        <name evidence="4" type="ORF">PPSC2_16635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transpeptidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372095.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03970"/>
    <dbReference type="EnsemblBacteria" id="ADO57510">
        <property type="protein sequence ID" value="ADO57510"/>
        <property type="gene ID" value="PPSC2_16635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3550"/>
    <dbReference type="eggNOG" id="COG0768">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009289_6_0_9"/>
    <dbReference type="OMA" id="SCDTYYY"/>
    <dbReference type="OrthoDB" id="213680at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005543">
        <property type="entry name" value="PASTA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005311">
        <property type="entry name" value="PBP_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036138">
        <property type="entry name" value="PBP_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011927">
        <property type="entry name" value="SpoVD_pbp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03793">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03717">
        <property type="entry name" value="PBP_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00740">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56519">
        <property type="entry name" value="SSF56519"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02214">
        <property type="entry name" value="spoVD_pbp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51178">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PASTA" evidence="3">
        <location>
            <begin position="579"/>
            <end position="638"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="638" mass="69790" checksum="2090DBB608056F1E" modified="2011-01-11" version="1">MKKSNVIMRRRLVWGLLGLFVLFAALSIRLAYVQLGKGGELSAKAEDSWRRNIPFAAKRGEILDRQGTALTYNVSSPTVMAIPVQIKEPEETARRLAPLLDMSEDKVLKLITKRTASQKLQPGGRKITMEKAQKIRDLKLPGIVVAEDNKRYYPYGDLAAHILGFTGIDNQGLTGVEKQQNSKLRGIDGSIAYLSDAGGRLMPGSSEKYIEPKDGLNLQLTIDKSVQSIMERELDQAMVKFQAKSALSIAMNPKTGEILGMAGRPSYEPALYKQYAPEIYNRNLPIWMTYEPGSTFKIITLAAALEEKKVNLKNDRFFDPGYIEVGGARLRCWKKGGHGSQTFLQVVENSCNPGFVTLGQRLGKETLFKYIRNFGFGSKTGIDMIGEGNGILFKLAQVGPVELATTAFGQGVSVTPIQQVTAVSAAINGGNLYKPHITKGWIQPETGKVLEKVEPELVRRVVSEDTSRQVREALESVVAKGTGRPAFIEGYRVGGKTGTAQKVINGRYSSSEHIVSFIGFAPADDPQIVVYTAVDNPKGIQFGGVVAAPIVQNILKDALIALKIPPRTNQIAKEYKYGEKPIETVPDLVGATAADLYEDMNMNFMLVKSGSGKTVISQAPKPGSRLERGSTIRIYMGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L3</accession>
    <name>E3E8L3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sporulation protein YqfC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yqfC</name>
        <name evidence="1" type="ORF">PPSC2_16870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372145.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04205"/>
    <dbReference type="EnsemblBacteria" id="ADO57562">
        <property type="protein sequence ID" value="ADO57562"/>
        <property type="gene ID" value="PPSC2_16870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3601"/>
    <dbReference type="eggNOG" id="ENOG5032ZA5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_161222_2_0_9"/>
    <dbReference type="OMA" id="ITDQPRI"/>
    <dbReference type="OrthoDB" id="2019102at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022476">
        <property type="entry name" value="Spore_YabP/YqfC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022477">
        <property type="entry name" value="Spore_YqfC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038705">
        <property type="entry name" value="YabP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07873">
        <property type="entry name" value="YabP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02856">
        <property type="entry name" value="spore_yqfC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="97" mass="10940" checksum="796AADC4A9AE9869" modified="2011-01-11" version="1">MSRMSRKLRKWASETLELPQDILFDLPRLTLIGSRQLYVENHRGVVDFTPDQLVLALAQGRLRVSGHDLIITSILPDQVSVEGHITDIQMEGTEEGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L6</accession>
    <name>E3E8L6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_16880</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372148.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3610"/>
    <dbReference type="EnsemblBacteria" id="ADO57565">
        <property type="protein sequence ID" value="ADO57565"/>
        <property type="gene ID" value="PPSC2_16880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3604"/>
    <dbReference type="eggNOG" id="ENOG50305FE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1473829_0_0_9"/>
    <dbReference type="OMA" id="MPTFGGD"/>
    <dbReference type="OrthoDB" id="2089549at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="192" mass="21877" checksum="1E2058206E03BBB9" modified="2011-01-11" version="1">MNFISWIFDHLYILIVIGFALVSFLGKSIQGGDRKSPRRQGMPTFGGDHGSRGSSTSPRPFTTEPEQERRQQDVTGELQRQFPNERRAVIEARRIEEVGDGLEKAERMDQDSLDNGTTLEDRIRIMEEERRMVLARLDRISNARDSEEITDGLEQTSQESGTVNAADLRRGVIWAEILGPPRSKRYMDGGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9T8</accession>
    <name>E3E9T8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372457.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3926"/>
    <dbReference type="EnsemblBacteria" id="ADO57878">
        <property type="protein sequence ID" value="ADO57878"/>
        <property type="gene ID" value="PPSC2_18335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3923"/>
    <dbReference type="eggNOG" id="ENOG50307B4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2233871_0_0_9"/>
    <dbReference type="OrthoDB" id="2207080at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168278" evidence="1">
        <location>
            <begin position="28"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="10722" checksum="ACEFBA13BE2BB3D3" modified="2011-01-11" version="1">MKKKLTILSLALAITAFSTVSLSASYASDYDVSSGNSSPLISANANGAAVEPQAIASLARKAVQVGKAAYEANKDALREATRLGSLLGTGVSSSDVENADVIFDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA11</accession>
    <name>E3EA11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Sodium:alanine symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dagA</name>
        <name evidence="9" type="ORF">PPSC2_19615</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58144.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324662.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4194"/>
    <dbReference type="EnsemblBacteria" id="ADO58144">
        <property type="protein sequence ID" value="ADO58144"/>
        <property type="gene ID" value="PPSC2_19615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4183"/>
    <dbReference type="eggNOG" id="COG1115">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024867_1_2_9"/>
    <dbReference type="OrthoDB" id="883596at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015655">
        <property type="term" value="F:alanine:sodium symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001463">
        <property type="entry name" value="Na/Ala_symport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30330">
        <property type="entry name" value="PTHR30330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01235">
        <property type="entry name" value="Na_Ala_symp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00175">
        <property type="entry name" value="NAALASMPORT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00835">
        <property type="entry name" value="agcS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0769">Symport</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="63"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="212"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="238"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="300"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="347"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="389"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="416"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58144.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="49780" checksum="D4F66B0023E5578A" modified="2015-05-27" version="2">MNLVHLLETIDSWMWGAPLLILVMGTGLWLTIRLKMLQIIRLPLALKLIGKAPDEGSGDVSSFGALSTALAATVGTGSIVGVATAIKLGGPGSLFWMLVAAFFGMATKYAEGLLSVKYRVKDRNGQFSGGPMYYIENGLGRRFKPLAMLFAFSGILVALFGIGTFPQVKAIVSSTESSFGVPTVVTAIIISVLTAVVTIGGLKSIAKVSTKIVPFMSGLYIVVCLIVLIKFAGELPHAIALVLQGAFSTTSATGGFAGATIMLAMRSGVARGIFANEAGLGSAPIAAAAAKTKWPAEQGLISMTGVFIDTMIICNLTGFTLLVTGIWSGNDDGGLMTQHAFSSAFPAGAELVTISLILFAFTTILGWNYYGERCVEYLLGVKWIKPYRYLFIILVAGGAFIKLDAIWLLADIFNAMMAFPNLIALLGLSGIVVAETRTYMNSLYPNKKKGILAGANVGAAIQVEEKGQTINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAF0</accession>
    <name>E3EAF0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Iron ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yclN</name>
        <name evidence="8" type="ORF">PPSC2_21665</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373135.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08860"/>
    <dbReference type="EnsemblBacteria" id="ADO58568">
        <property type="protein sequence ID" value="ADO58568"/>
        <property type="gene ID" value="PPSC2_21665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4606"/>
    <dbReference type="eggNOG" id="COG4606">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_3_0_9"/>
    <dbReference type="OMA" id="WFAGSFT"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="133"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="222"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="264"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="291"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="317" mass="34713" checksum="ECA73F31E550A409" modified="2011-01-11" version="1">MKLRYLILAILVLAFASVFIGVHDVTPLDLFHLTNDQAQVLLISRFPRLISIIIAGASMSICGLIMQQLTRNRFVSPTTAGTMDAARLGVLMAIMVFGAAGFWTKMLTAFGFALGGTLIFMKILDKIRFKDPVFIPLVGLMFGGILNSVTTFFAYKYNLIQGISSWMQGDFSLIMSGRYEMLYLSVPLVALAYIYANRFTIAGMGEDFAANLGVHYKRTVNVGLVIVALVSSVVILTVGTIPFLGLVVPNLVSMYMGDNLKKSLAHTAILGAVFVLFCDILGRVIIYPYEISVGLTVGVIGSALFLYLLLRRRAYES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAP2</accession>
    <name>E3EAP2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Beta-mannosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">celA7</name>
        <name evidence="10" type="ORF">PPSC2_22815</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 26 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58801.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886149.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10290"/>
    <dbReference type="CAZy" id="CBM3">
        <property type="family name" value="Carbohydrate-Binding Module Family 3"/>
    </dbReference>
    <dbReference type="CAZy" id="CBM35">
        <property type="family name" value="Carbohydrate-Binding Module Family 35"/>
    </dbReference>
    <dbReference type="CAZy" id="GH26">
        <property type="family name" value="Glycoside Hydrolase Family 26"/>
    </dbReference>
    <dbReference type="CAZy" id="GH44">
        <property type="family name" value="Glycoside Hydrolase Family 44"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58801">
        <property type="protein sequence ID" value="ADO58801"/>
        <property type="gene ID" value="PPSC2_22815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4832"/>
    <dbReference type="eggNOG" id="COG2730">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4124">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5297">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_257588_0_0_9"/>
    <dbReference type="OrthoDB" id="3323at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030248">
        <property type="term" value="F:cellulose binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016985">
        <property type="term" value="F:mannan endo-1,4-beta-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006080">
        <property type="term" value="P:substituted mannan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00063">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008965">
        <property type="entry name" value="CBM2/CBM3_carb-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001956">
        <property type="entry name" value="CBM3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036966">
        <property type="entry name" value="CBM3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005084">
        <property type="entry name" value="CMB_fam6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003961">
        <property type="entry name" value="FN3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036116">
        <property type="entry name" value="FN3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022790">
        <property type="entry name" value="GH26_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000805">
        <property type="entry name" value="Glyco_hydro_26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024745">
        <property type="entry name" value="Glyco_hydro_44"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40079">
        <property type="entry name" value="PTHR40079"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00942">
        <property type="entry name" value="CBM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16990">
        <property type="entry name" value="CBM_35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00041">
        <property type="entry name" value="fn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02156">
        <property type="entry name" value="Glyco_hydro_26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12891">
        <property type="entry name" value="Glyco_hydro_44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00739">
        <property type="entry name" value="GLHYDRLASE26"/>
    </dbReference>
    <dbReference type="SMART" id="SM01067">
        <property type="entry name" value="CBM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00060">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49265">
        <property type="entry name" value="SSF49265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49384">
        <property type="entry name" value="SSF49384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51172">
        <property type="entry name" value="CBM3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51175">
        <property type="entry name" value="CBM6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50853">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51764">
        <property type="entry name" value="GH26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168107" evidence="5">
        <location>
            <begin position="40"/>
            <end position="1354"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="6">
        <location>
            <begin position="560"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="domain" description="CBM6" evidence="8">
        <location>
            <begin position="656"/>
            <end position="774"/>
        </location>
    </feature>
    <feature type="domain" description="GH26" evidence="9">
        <location>
            <begin position="795"/>
            <end position="1090"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="6">
        <location>
            <begin position="1107"/>
            <end position="1199"/>
        </location>
    </feature>
    <feature type="domain" description="CBM3" evidence="7">
        <location>
            <begin position="1199"/>
            <end position="1352"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="946"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="1038"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58801.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1354" mass="149006" checksum="1436628A7BCFE8B5" modified="2015-05-27" version="2">MRAKNSSNLLFKRSKWLPVVMACTMLVGGALPAPTVVHGQTAKTITIKVDTSKDRKPISPYIYGTNQDLTGDENMAARRLGGNRMTGYNWENNMSNAGSDWQQSSDNFLCNNGGLTGAECEKPGAVTTSFHDQSLKLGAYSLVTLPMAGYVAKDGNGSVQESEKAPSARWNQVINAKNAPFQLQPDLNDNRVYADEFVHFLVNKYGAASTKTGVKGYALDNEPALWSHTHPRIHGEKVGAKELVDRSVSLSKAVKAVDAGAEIFGPVLYGFGAYKDLQTAPDWDSVKGSYSWFVDYYLDQMRLSSQAEGKRLLDVFDVHWYPEAMGGGIRITNEVGNDETKQARMQAPRTLWDPTYKEDSWIAQWNSEFLPILPRLKQSVDKYYPGTKLAMTEYSYGGENDISGGIAMADVLGIFGKNDVYMANYWKLKDGANNYVSAAYKLYRNYDGKNATFGDTSVSAQTSDIVNSSVHASIANASDKELHLVVMNKSMDSAFDAQFDLSGEATYGSGKVWGFDKNSPQIKEAAPITQISGNRFTYTVPPLTAYHIVLTAGKDTSVPPVENPEGFKLKAEAGDGQVHLSWDASNGVVGYSVQRATDENGPFTTVVASLIETSYTDTNLTNGSSYYYKVTAKTNKGTSESNVLKAVPKVSVNDPVRYEAEDGTLKGTIVESSGTGYSGTGYVTNFHNAGDSLTMTIQAPTAGLYNLTIGYRSPHDDKRTNFSLNGKAFGELVLGKTADFKETSGGKLLLNAGANTIGFETGWGWYDIDYVRLEPAADRPPHAVTKTLTNPNATVEAKALMNYLVDQYGKNMLSGQEEINEIDWLQANVGKKPAIAALDLIDYSPSRAEHGLSSTEAEKAIAWDKQGGIVTFAWHWNAPKGLIDTQGKEWWRGFYADSTTFDIEYAMSHPESEDYKLLIRDIDVIAAQLKKLQDAKVPVLFRPLHEAEGKWFWWGAKGPEPVKKLYILMHDRLTNVHKLNNLIWVWNSVAPDWYPGDEYVDILSFDSYPQAGDYSPQIAKYEDLVTLGKDKKLVAMSENGPIPDPDLMKAYQAHWSWFATWYGDFLRDGKQNSLEHLKKVYNHPNVITLDELPTNLKTYGITEQPSVPGSFTLNAAGETAKVSLSWTASANAKSYEVKRSTAENGAFATVVSDVYGSSYTDTAVTADTTYYYQVVAKNDAGQTLSNTASAAPKADTQQPTTGLLLQYRTADTKVNDNHLNPHFQIVNKGTASVPLNELKIRYYYTIDGDREQTFNCDYAALSCSKLNGKLVKMEKAATSADYYLEVSFNSDAGVLAPGGSTGEIQTRIHKTDWSNYNESDDYSYKGTQSSYADHVKATLYQNGVLVWGTEPIAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAP5</accession>
    <name>E3EAP5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_22825</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58803.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324784.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10300"/>
    <dbReference type="EnsemblBacteria" id="ADO58803">
        <property type="protein sequence ID" value="ADO58803"/>
        <property type="gene ID" value="PPSC2_22825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4834"/>
    <dbReference type="eggNOG" id="COG3963">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_085338_2_0_9"/>
    <dbReference type="OrthoDB" id="2030110at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001737">
        <property type="entry name" value="KsgA/Erm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11727">
        <property type="entry name" value="PTHR11727"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00398">
        <property type="entry name" value="RrnaAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58803.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="20988" checksum="3F91AF4D4FA088CF" modified="2015-05-27" version="2">MNAIHFIREYIRHPRSVGAVIPSSRQLAKQIATPIYFDKASCIIEYGAGTGVFTQELILNKRPETLLLVIEANESFYKTLQSKYGHLERVHIIHGSAEHVARYMKQYHVSKVDYIVSGLPFTSLPAALSSLILGQTAEVLGQEGKFITFQYSKVKHNFFRTFFADIQIKKVNYNVPPAYVFTCSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAY5</accession>
    <name>E3EAY5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phage_base_V domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_23970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373584.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11475"/>
    <dbReference type="EnsemblBacteria" id="ADO59049">
        <property type="protein sequence ID" value="ADO59049"/>
        <property type="gene ID" value="PPSC2_23970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5072"/>
    <dbReference type="eggNOG" id="COG3501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_309689_0_0_9"/>
    <dbReference type="OMA" id="NELIRGH"/>
    <dbReference type="OrthoDB" id="1880900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006531">
        <property type="entry name" value="Gp5/Vgr_OB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04717">
        <property type="entry name" value="Phage_base_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phage_base_V" evidence="2">
        <location>
            <begin position="281"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="698"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="704"/>
            <end position="721"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="722"/>
            <end position="743"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="961" mass="108971" checksum="10CE6A83BC52E00A" modified="2011-01-11" version="1">MGLAGTVLTYGNIRVNAPYEIVRLLDIQLTQKVNEHGKVYITALIPDEDHAKYDGLAHDEDVLEVYEIDEDQGTVSIFKGIVTNISIGFKNGVYHMYIEAASFTYILDRQRKNRSFQNGNLTYYQLFRELIDTYPHGDFIDLTDSDQKLGGFTIQYGESDWEFLKRMASHLHSGLIAEITSVYPRLWLGTSKEQVKGELRSINFSLQKTKSGPRYTYAEVEDTKRFELGDVVLFRRKHWVIDQVHAEMKQGIMTYDYVLVPEEGIPREVIHNQFIKGTSIEGKVIDLNSENESVKLHLSVDSMQPKVEGCWFSYPTMYTGAGIGWHCMPELGDHVHLYFPSNNEKEARVVQSLRKRDYKGDEISQPSRKLFHTKTQKVARFDDKELALSTQKEKILVRLNPASGIHVYSHHDLTFHADTDLVLHGKKVQMNATREISLTCKTSYIRTDGTFHIKASKFMKSQVPDAELKAYKSLVQELKGKGYPQWVQNLLLQYKTDYYKAVAAGDKKGAKEAAAKAKQLRQQVAEIDRMPAWARVQMHEYTSQWWEGHSTNDKAKQKQMHLLANQLRDNVLINELIRGHSAKSYQDANRLEELSGQYADAAHKLTIADQKAIAKEAAGLRSKYGVNSLLARDNLNKLAKKYPDSFSYKLPTTGDWDKELNAALHDFAKKYGLENKGYGRDVLAVYLHQVANGILPWPKVSRPATPTVPTTTTTTKTEPGKKPPTTPEKPAKEEPKPLDPNDYKDGLVAVKKIENYINSKGIKGNQARALFRINDYTNNSIVQKKLSSNRKAPLVFFFEGDGSYSYAQDDHQEGRYGATAIVVVDGEIKYTSNNASTLPDYENEAATVNEGVYEFKSGRHRGTYPALRIRNGGGVPSIMQNKKHTATGINIHKGFNKDSSKPKHESSTGCITIHKYEFTQFLIAVGVVKHSLEDKYINEEIYGLAIIDRKDRTKKSITKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB30</accession>
    <name>E3EB30_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4367 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_25130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373843.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5373"/>
    <dbReference type="EnsemblBacteria" id="ADO59310">
        <property type="protein sequence ID" value="ADO59310"/>
        <property type="gene ID" value="PPSC2_25130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5326"/>
    <dbReference type="eggNOG" id="ENOG502ZJCV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058813_0_0_9"/>
    <dbReference type="OMA" id="MQNEQDS"/>
    <dbReference type="OrthoDB" id="605196at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025377">
        <property type="entry name" value="DUF4367"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14285">
        <property type="entry name" value="DUF4367"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4367" evidence="2">
        <location>
            <begin position="246"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="354" mass="40378" checksum="1877CA869BF66306" modified="2011-01-11" version="1">MRELQDRTQKQSLKYTDLQDRGFKNMDKLTEPENALKIQAFDVSDKVMEQVYQKAPPKKGNIGKIHFQPRITVPIMILLFVVGASVTGYAASQYLEFRNSKGDVVLNTAKTPAETDASKTYSSTYTRWNEEVKNRLQPGEYAAYYVKDDSMNQNNLSNLALFAYKPAELSNFNSLQDEIKRTEAPLFSNPTHLPDGYQFEFGYVYPIAAYPGMMDKKEYRALTDKLMQQAKAAPKGENLFIQKLNWDKSDSSFARYARGNDYVNITVTKYTPEVTKTTIMQNEQDSAEQLTIKGTKAYYIRASEASRPLEAGKNRLGWIDEKRHLHYNISDNQDSPLTKDDLVKIAEDLLNASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF5</accession>
    <name>E3EBF5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphodiesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_21955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373195.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4683"/>
    <dbReference type="EnsemblBacteria" id="ADO58629">
        <property type="protein sequence ID" value="ADO58629"/>
        <property type="gene ID" value="PPSC2_21955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4671"/>
    <dbReference type="eggNOG" id="COG1524">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_516632_0_0_9"/>
    <dbReference type="OMA" id="NERMAYI"/>
    <dbReference type="OrthoDB" id="191097at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002591">
        <property type="entry name" value="Phosphodiest/P_Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01663">
        <property type="entry name" value="Phosphodiest"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169033" evidence="1">
        <location>
            <begin position="27"/>
            <end position="529"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="529" mass="59136" checksum="541548AA5951B44A" modified="2011-01-11" version="1">MGIKYKITIVLVLSLSLLIVGCRADSSQQLNQQSIKSHIPVNNKAKPVIFIMIDSLMDKPLQDAIQEGRAPAMQYLLHQGKYFPHVVSSFPTMSVTIDSTLLTGTYADQHHVPGLVWYSDSRKRMIFYGNGAKEALKIDQLQVFLDAIYQLNQVHLNKKTKTIHEELADKGEESASINAIVFRGRTKHALKVPDFIANSSRVPEKMIVTGPKWLSYAALAQLNPKNSWNTPVWKKFGMNNEFSAKDTAFLISQKKLPDVTIAYFPENDNLAHRKGPTQLKGIEKADQALQAVLNAYGSWEEAVNSAIWIVMGDSAQSAVYDDRQAATVDLRSLLSHYRIAKLNQPVRSDDQIVIAANERMAYIYAINDNVELSDVVKSLQKENKLDIIAMKDGTNHIHVTKGKKGKLFSYRPGGKYMDEYGQSWTLSGEEDLVDITVNNNRIKYGKYPDILARLHGAMNSHEGRYVVVTVQPGYELVSESSPTHIGGGAHGSLHEKDSLVPLIISGTNTRPKTLRIVDIKDWILQLVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBH6</accession>
    <name>E3EBH6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">amyD3</name>
        <name evidence="7" type="ORF">PPSC2_22040</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373216.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09190"/>
    <dbReference type="EnsemblBacteria" id="ADO58650">
        <property type="protein sequence ID" value="ADO58650"/>
        <property type="gene ID" value="PPSC2_22040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4690"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_0_9"/>
    <dbReference type="OMA" id="IVTVWQY"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="157"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="207"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="269"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="72"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="33208" checksum="28846263F5935998" modified="2011-01-11" version="1">MIAEKGVWNRLRTRLLFTGPTLFAFITVMIIPFLYGIYLTFTNWDGISTTLSLVGIQNYLAVFRDIEFWKSFALTLKYVFYTVVLINVIAFMLAYVLTKGLKGQSIFRAGFFLPNLVGGIVLGFIWQFIFNNVLVYLGQHADIQALSTTWLADPDKAFWTLVIVTVWQNAGYMMVIYIAGLTGVPNDIMEAASIDGANSWTRLRKMVLPLMVPSFIVCIFLSLQRGFMVYDVNLALTKGGPFSSTQMVSMHVYEKAFLSRDYGVGQAEAFVLFLMVALITLLQVYFSKKLEVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBV4</accession>
    <name>E3EBV4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-deoxy-D-gluconate 3-dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.125</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kduD</name>
        <name evidence="1" type="ORF">PPSC2_24095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.125" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373613.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11600"/>
    <dbReference type="EnsemblBacteria" id="ADO59078">
        <property type="protein sequence ID" value="ADO59078"/>
        <property type="gene ID" value="PPSC2_24095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5101"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_1_9"/>
    <dbReference type="OMA" id="QANLMTI"/>
    <dbReference type="OrthoDB" id="1294334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008678">
        <property type="term" value="F:2-deoxy-D-gluconate 3-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011286">
        <property type="entry name" value="2-deoxy-D-gluc_3_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01832">
        <property type="entry name" value="kduD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="27992" checksum="CCCFBC9944C157CD" modified="2011-01-11" version="1">MGLDHFSLDFFSLKGKTAIVTGGNTGLGQGYSVALAKAGANLFIVANNDDYEETRRLLEPTGVKFAFHQADLTEKASLKKLVEECIKEFGKIDILVNNAGTIRRAPLLEYKDEDWDAVMEINLNAVYHLSQEVAKIMVEQKSGKIINVASMLAFQGGKFVPPYTASKHAVAGLTKAFANELAVHNIQINAIAPGYIATANTAPIRADENRNQEILSRIPAGRWGDPSDLMGVVVFLASQGSDYMNGHILAVDGGWLVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC26</accession>
    <name>E3EC26_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Peptidase M15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">dacA3</name>
        <name evidence="11" type="ORF">PPSC2_25395</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase S11 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373899.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12890"/>
    <dbReference type="MEROPS" id="S11.001"/>
    <dbReference type="EnsemblBacteria" id="ADO59366">
        <property type="protein sequence ID" value="ADO59366"/>
        <property type="gene ID" value="PPSC2_25395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5382"/>
    <dbReference type="eggNOG" id="COG1686">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027070_1_2_9"/>
    <dbReference type="OMA" id="GDIIYQY"/>
    <dbReference type="OrthoDB" id="1499212at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018044">
        <property type="entry name" value="Peptidase_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001967">
        <property type="entry name" value="Peptidase_S11_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00768">
        <property type="entry name" value="Peptidase_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00725">
        <property type="entry name" value="DADACBPTASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S11" evidence="10">
        <location>
            <begin position="32"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="155"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="157"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="34416" checksum="627A8025BBDB1784" modified="2011-01-11" version="1">MMKKHWLRWAIVVPVLIILIFITLGPRLLIGKPNVDADAAVLMDMHTGELLMDVNGDKPMPSANMSKLMTELLVLEDIRTGRLGWNDEVRISRYASTVGGVNLSLRYGERMTVSELFQSMVVYSANDAAVALAERSSGNEYAFVKRMNEKAAQIGLSPDSRFSNASGAGQSELGPNHPKDIRGETKMTASDTAKLASYLITSHPEILRTSSRTQMELKDKGIYISNTNWMLPSLAGPYSYAGTDGLKAGYTSDAGYCFTGTAEQHGKRLVAVVLGAPSKEERFEQTRKLFDYGFSLSTSFPVRLQNLVKLAPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECK6</accession>
    <name>E3ECK6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">M1-926</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">M1-926</name>
        <name evidence="6" type="ORF">PPSC2_03950</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0154 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369414.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16755"/>
    <dbReference type="EnsemblBacteria" id="ADO54778">
        <property type="protein sequence ID" value="ADO54778"/>
        <property type="gene ID" value="PPSC2_03950"/>
    </dbReference>
    <dbReference type="GeneID" id="66574187"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.785"/>
    <dbReference type="eggNOG" id="COG3763">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_192241_0_0_9"/>
    <dbReference type="OMA" id="WNIVIPI"/>
    <dbReference type="OrthoDB" id="1944312at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005359">
        <property type="entry name" value="UPF0154"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03672">
        <property type="entry name" value="UPF0154"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="59"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="59"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9746" checksum="440B6A3B7B98DE44" modified="2011-01-11" version="1">MVWNIVIPIITLIVGLVGGFFIGAYYLRKQLEKMQNDPETLQKMAKQMGYNLNGKQMQKAQQMMKNQQFSKNQPGARKNQGRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECM9</accession>
    <name>E3ECM9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GDSL family lipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_04055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369436.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3ECM9"/>
    <dbReference type="STRING" id="1406.LK13_16855"/>
    <dbReference type="EnsemblBacteria" id="ADO54801">
        <property type="protein sequence ID" value="ADO54801"/>
        <property type="gene ID" value="PPSC2_04055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.808"/>
    <dbReference type="eggNOG" id="COG2755">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3401">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037723_0_0_9"/>
    <dbReference type="OMA" id="NHAESGE"/>
    <dbReference type="OrthoDB" id="1247435at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01821">
        <property type="entry name" value="Rhamnogalacturan_acetylesterase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037459">
        <property type="entry name" value="RhgT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43695">
        <property type="entry name" value="PTHR43695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH_hydro" evidence="1">
        <location>
            <begin position="153"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="370" mass="41084" checksum="919993FE86A99671" modified="2011-01-11" version="1">MWKFDFGPGEPADGCKAVSPDCIYTAEQGYGFETTEHVYGRQRQNPAKDARTRLRNSFCIPLNASFIADVPDGLYLVTVLVGDPLAETLTRFQAGEGKHMLPPVHTLPGQFTEAMFTVPVRGGRLRLTVSGTAPRLNALEIAPALQSLRLFLVGDSTVTDQGLSGYPYTGWGQALPALFKHDVCVDNHAVSGRSSKSFVDEGRLDAILGEMKTGDFLFIQFGHNDQKPDPERATEPFTTYKEHLRLYIDGARSKGGTPVLITPVHRRYFNEDGTLSDTHGDYITAVRELAEEANVPLIDLSARTQELYEELGPEESKELFMWLLPGEYMNFSGGLEDNTHFHENGAIRIANMVTAAVKELDLQPLRMYLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED31</accession>
    <name>E3ED31_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ywpJ</name>
        <name evidence="1" type="ORF">PPSC2_06340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369930.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19285"/>
    <dbReference type="EnsemblBacteria" id="ADO55299">
        <property type="protein sequence ID" value="ADO55299"/>
        <property type="gene ID" value="PPSC2_06340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1309"/>
    <dbReference type="eggNOG" id="COG0561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044146_1_3_9"/>
    <dbReference type="OMA" id="YYYEVFT"/>
    <dbReference type="OrthoDB" id="1374424at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000150">
        <property type="entry name" value="Cof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00099">
        <property type="entry name" value="Cof-subfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="32314" checksum="148F90BFED1AA634" modified="2011-01-11" version="1">MKLFAIDMDGTLLNEEGKISKANAEAIRKAQQQGVQVTIATGRAAYDAWTKLEEAELVTPVIGANGATVHDAHRRQLTSTPMGRSETFEVLSWLEGNDFYYEVMTDRAIYSPQKGHQLLAVEMDRLLSANPDISLDTLLHAAEKQYEQTGHTRIASYEQIPLDVEIYNVLCFSFDQAKLEWGRERYRDFQGLNMVISSDRNFEVEHKDASKGNALRYLANHLSIPMQEAVAIGDSYNDISMLTMAGRGIAMGNAKDDIKAVCSDVTLTNVEDGVAHALLNLLKTVKADTVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED55</accession>
    <name>E3ED55_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnQ1</name>
        <name evidence="6" type="ORF">PPSC2_02220</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54412.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14985"/>
    <dbReference type="EnsemblBacteria" id="ADO54412">
        <property type="protein sequence ID" value="ADO54412"/>
        <property type="gene ID" value="PPSC2_02220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.421"/>
    <dbReference type="eggNOG" id="COG1126">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54412.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="27583" checksum="D05113D0873C111F" modified="2015-05-27" version="2">MSSLIQFRNVNKHYGHFHVLKDINLQIKEGEVVVIIGPSGSGKSTLLRCINRLETISDGELIVNDVPVHDKKIDINAFRRNIGMVFQHFNLYPHKKVIENIVLAPMKVLGIPKEEAIQTALTYLKRVGIEEKAQSYPAQLSGGQQQRVAIARGLAMNPKIMLFDEPTSALDPETIGEVLDVMRSLAHQGITMVIVTHEMGFAREVADRVIFMDKGQILEDSQPAEFFQNPGEERARLFLSRLIHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED85</accession>
    <name>E3ED85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-596</name>
        <name evidence="3" type="ORF">PPSC2_02360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369082.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15125"/>
    <dbReference type="EnsemblBacteria" id="ADO54442">
        <property type="protein sequence ID" value="ADO54442"/>
        <property type="gene ID" value="PPSC2_02360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.452"/>
    <dbReference type="eggNOG" id="COG0715">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028871_6_0_9"/>
    <dbReference type="OMA" id="DWFVNPD"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027939">
        <property type="entry name" value="NMT1/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31528">
        <property type="entry name" value="PTHR31528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168373" evidence="1">
        <location>
            <begin position="34"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="61"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="347" mass="38313" checksum="33E618F44EBFFCCA" modified="2011-01-11" version="1">MKRMKMLSLGLISLWLMALTLTACGGNPPTSQKEAPAADTSTSTSAKGLKDVKVVLDWTPNTNHTGLYVAKDKGFYEKAGLNVQIVQPGSGGADQMVASNAAPFGISYQEGVTQARIQGVPLVSIAAVIQHNTSGFAAPVDRGIKSPKDFEGKSYGGWGSPVEEAVMKSIMDSDQGDVSKVKIVNMGNADYFTAVKRDIDFAWIFYAWTGIEAKLRGEPLDMLYVKDYSKNLDYYTPVIVSNEQTIKNDPELVKAFMDATAQGYEYTIAHPEEAADILSKAVPELDKKLVLASQKWLSPRYQDDAPQWGVQKAEIWKNYSDWMYERKLLSKPLEVDKAFTNDFLPKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDC7</accession>
    <name>E3EDC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">scd</name>
        <name evidence="1" type="ORF">PPSC2_04530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369539.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17430"/>
    <dbReference type="EnsemblBacteria" id="ADO54906">
        <property type="protein sequence ID" value="ADO54906"/>
        <property type="gene ID" value="PPSC2_04530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.909"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_3_9"/>
    <dbReference type="OMA" id="NAAGWDR"/>
    <dbReference type="OrthoDB" id="1821409at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="27321" checksum="B22828C2D3BE972F" modified="2011-01-11" version="1">MSKLKGQIALVTGASRGIGRGIALRLAREGAIVAVHYGRRHKEADEVVHQIEQLGGAAFTIGADFSALNGVYDLYAKLDEALRERTGDNRFDILVNNAGMGQIVPLEETTEESFDEVMNMNVKAPLFVTQQALPRLKNGGRIINLSSFVTRVASPSVFAYSMSKGAIDTLTRVLAHQLGSRHITVNAIQPGIINTEMNSGTLQDPNGQKFAAGLSTFKRWGEPEDVADIAAFLASSDSRWITGQLIDASGGSHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE9</accession>
    <name>E3EDE9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 4">Shikimate dehydrogenase (NADP(+))</fullName>
            <shortName evidence="4">SDH</shortName>
            <ecNumber evidence="1 4">1.1.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">aroE</name>
        <name evidence="7" type="synonym">ydiB1</name>
        <name evidence="7" type="ORF">PPSC2_04635</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>NADP(+) + shikimate = 3-dehydroshikimate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:17737"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.25"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the shikimate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.25" evidence="1 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369561.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17530"/>
    <dbReference type="EnsemblBacteria" id="ADO54928">
        <property type="protein sequence ID" value="ADO54928"/>
        <property type="gene ID" value="PPSC2_04635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.931"/>
    <dbReference type="eggNOG" id="COG0169">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044063_4_1_9"/>
    <dbReference type="OMA" id="SIFARND"/>
    <dbReference type="OrthoDB" id="1054867at2"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004764">
        <property type="term" value="F:shikimate 3-dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019632">
        <property type="term" value="P:shikimate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00222">
        <property type="entry name" value="Shikimate_DH_AroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041121">
        <property type="entry name" value="SDH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011342">
        <property type="entry name" value="Shikimate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013708">
        <property type="entry name" value="Shikimate_DH-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022893">
        <property type="entry name" value="Shikimate_DH_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089">
        <property type="entry name" value="PTHR21089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18317">
        <property type="entry name" value="SDH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08501">
        <property type="entry name" value="Shikimate_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00507">
        <property type="entry name" value="aroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 4" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="4 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shikimate_dh_N" evidence="5">
        <location>
            <begin position="16"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="SDH_C" evidence="6">
        <location>
            <begin position="262"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate binding" evidence="4">
        <location>
            <begin position="24"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="135"/>
            <end position="139"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF18317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="296" mass="32239" checksum="FD01D39784E98AC0" modified="2011-01-11" version="1">MKNAGRIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNIRGYNVSMPNKTAILQYLDELDDSAKFTGAVNTVVNTDGKLKGYSTDGSGYVRNLQEHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARNDQFFARAEENVRIINEEMKHAQVKANIYALEDQEKLREEILTSHIFANGTGVGMKPLEGKSVIEDVSMLRSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVAYIKEQLFADQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDL8</accession>
    <name>E3EDL8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_06485</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369957.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55327">
        <property type="protein sequence ID" value="ADO55327"/>
        <property type="gene ID" value="PPSC2_06485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1336"/>
    <dbReference type="eggNOG" id="ENOG50307J1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_201863_0_0_9"/>
    <dbReference type="OMA" id="MTVMMAM"/>
    <dbReference type="OrthoDB" id="2164015at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169125" evidence="2">
        <location>
            <begin position="17"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="72" mass="8733" checksum="581F43154EB4D126" modified="2011-01-11" version="1">MTTMTVMMAMMTTFPAMTFLIKVFMFPVITFKFWFKLNDSHLNDFLKNTFFWLWKMTIMLTMFIHSNSPPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDU2</accession>
    <name>E3EDU2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">holB</name>
        <name evidence="4" type="ORF">PPSC2_00100</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368661.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13115"/>
    <dbReference type="EnsemblBacteria" id="ADO54007">
        <property type="protein sequence ID" value="ADO54007"/>
        <property type="gene ID" value="PPSC2_00100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.19"/>
    <dbReference type="eggNOG" id="COG0470">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006229_4_5_9"/>
    <dbReference type="OMA" id="RIESGNH"/>
    <dbReference type="OrthoDB" id="1971388at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004622">
        <property type="entry name" value="DNA_pol_HolB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00678">
        <property type="entry name" value="holB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0235">DNA replication</keyword>
    <keyword evidence="3" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="331" mass="37154" checksum="970B97B2B44C68EE" modified="2011-01-11" version="1">MSFQHILGQDVAKKMLQSALRNHTVSHAYVFSGPQGSGQMNMAQTFAKALFCEKQTDDACGECLSCRKVEHGNHPDLHIVEPDGATIKIDQIRGLQRIFSYKSESSNPKVYIIRQADTMTVQAANSLLKFLEEPQIPVVGILISENGQALLPTIQSRTQQVPFHALQPEMMMQALIGEGYTAGLVRSVVHMASGLESCREILQQNWFAEIRNVVLQLVKESMSRGSSSIILAQQKIFKTGLSDHLDILFHLFHLWFKDMLHFRYGRHESIVFIDHLESVSKLAITRSTEQWVSYMDLAANCRKKLRFHVNGQLCVEQLLIGLSDTSGSITG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE27</accession>
    <name>E3EE27_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore gernimation protein KA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gerKA1</name>
        <name evidence="4" type="ORF">PPSC2_02745</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369147.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0523"/>
    <dbReference type="EnsemblBacteria" id="ADO54507">
        <property type="protein sequence ID" value="ADO54507"/>
        <property type="gene ID" value="PPSC2_02745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.516"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021639_4_1_9"/>
    <dbReference type="OMA" id="SHCITEE"/>
    <dbReference type="OrthoDB" id="576172at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004995">
        <property type="entry name" value="Spore_Ger"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03323">
        <property type="entry name" value="GerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005690">
        <property type="entry name" value="GerBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="280"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="322"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="413"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="441"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="517"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="11"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="538" mass="59202" checksum="D18AF1352B016C18" modified="2011-01-11" version="1">MVDKLKKWLFKQPSRSNSGTSPEPVNDEKSTELSEKLSVTLKDNIILLKQEIGHSTDFILRCLNDKQGNPVLAVGFLQGLIDQQILTTLLEELTAGIRNGDLSDRNVESWLMDRIPIGGITCLKNEKALIDAVLYGQVVLLVEGSTKAFAASMGGGAKRAVEEPTSQTVIRGPKEGFTEDISTNIALLRRRIKSTELHFDSRIIGSYTQTKVSVAYVRGIADPEVVKEISKRLDSINTDSILESGYIEEFIQDGVWTPFPTMVNTERPDTVAGSLLEGQVAILVDGTPFVLIAPVTFFRFISSSEDYYQRYDLASFLRIVRMASFFLALLLPAFFIATTTFHQEMLPTTMLITLAAQRENTPLPALLEAMIMELTFEVIREAGVRMPRAVGPAISIVGALVLGQAAVQAGLVSAAMVIVVSFTAICNFVLPAFNMAGSVRLLRFVLMLMAGLLGLYGVLSVLVPILVRLVSVNSFGVPYMMPLAPFYKSNMKDLFVRVPRWKMKKRPVMIGDSNPVKQATEQESFAEQAGEHGRDPMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE29</accession>
    <name>E3EE29_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sdr3</name>
        <name evidence="2" type="ORF">PPSC2_02755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369149.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EE29"/>
    <dbReference type="STRING" id="886882.PPSC2_c0525"/>
    <dbReference type="EnsemblBacteria" id="ADO54509">
        <property type="protein sequence ID" value="ADO54509"/>
        <property type="gene ID" value="PPSC2_02755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.519"/>
    <dbReference type="eggNOG" id="COG4221">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_2_10_9"/>
    <dbReference type="OMA" id="NIQPDSH"/>
    <dbReference type="OrthoDB" id="1261526at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="27278" checksum="99A26F66DFAAE128" modified="2011-01-11" version="1">MRLIQNATLSGIKDKVVVITGASSGIGEATTLLLAEHGAKVVLGARRPERLEALAARIAEVGGEVVYASTDVRRREDVTKLIHLACERFGTIDVLVNNAGVMPISPLDDLRVEDWEDMIDVNIKGVLYGIAAALPVFRKLGSGHFVNIASTAGHKTVPHQSVYSATKFAVRAISEGLRQEAGDKVRVTIISPGLVRTNFAEGVTNLEVRARLEESRDQFALPPEAIARAIAYAIEQPVDVDVNEIVIRPTSQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB1</accession>
    <name>E3EEB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcQ1</name>
        <name evidence="2" type="ORF">PPSC2_05145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369667.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18070"/>
    <dbReference type="EnsemblBacteria" id="ADO55034">
        <property type="protein sequence ID" value="ADO55034"/>
        <property type="gene ID" value="PPSC2_05145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1042"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021021_2_0_9"/>
    <dbReference type="OMA" id="FVAMMQF"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168881" evidence="1">
        <location>
            <begin position="27"/>
            <end position="529"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="529" mass="59558" checksum="1FB275C7C54E2005" modified="2011-01-11" version="1">MKTVKTASFAALAAILVLSGCGSSNSSNESDATDVNGKVTLNFLTQSSPLAPADPNDKLINKRLEEKTGIHIRWKNFTSDQFVEKRNLAIASGDLPDAVFDAGYSDYDLLKLAKDGVIIPVEDLIEQHMPNFKKVLEQSPEYKAMLTAPDGHIYSFPWIEELGTGKEAIQSVDDLPWINVEWLNKLGLSMPTTTEELKQVLIAFKTKDPNGNGQADEIPLSFIDKPGGEDLAFLYGAFGLGENWDHTVVTNDGKVVFTAADNGYKEAIKYIHDLYKEGLVDIESSQQDWNTYLAKGKDHRYGLYFTWDKANITGPNKKYDLMPPLAGPDGRVNVTRTNGIGFDRGRMVITSANKKLEATAKWIDQLYDPIQSIQNNWGTYGDTKQKNIFEYDEAKGMLKHLPLEGSAPVEIRQKTNIGGPLAVLDEYYGKYTTQPEDATWRLGLLKKVMVPHMQADHNYPKVFFSIDELDRLSTIETDLFAYVLRKRTEWYQNGKVEEEWPEYLQELNSLGLQEWLQIKQAGYDRNASK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEC2</accession>
    <name>E3EEC2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rbsB1</name>
        <name evidence="2" type="ORF">PPSC2_05200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369678.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18125"/>
    <dbReference type="EnsemblBacteria" id="ADO55045">
        <property type="protein sequence ID" value="ADO55045"/>
        <property type="gene ID" value="PPSC2_05200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1053"/>
    <dbReference type="eggNOG" id="COG1879">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_3_3_9"/>
    <dbReference type="OMA" id="YHFYMVA"/>
    <dbReference type="OrthoDB" id="1378040at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_4" evidence="1">
        <location>
            <begin position="53"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="332" mass="37580" checksum="F7EF3AF4C0369B4D" modified="2011-01-11" version="1">MSNRKWTFILIPVFLLFAWLLFQFTLSSLQIHQFTEQLKTVSPNDRGSDTKVVLISQELDNYYWRSIEQGARKEAEQYGIRLDYIGPDRINPSEQIKLLDKAIAAKADAILVQGINDPEYRRLIDKAAGLGIPVITIDTDEPDSRRLAYVGTDNEGAGKQMGMLLAKASGERGDIGVMISSERVENQRLRLAGFRSVISRYPKLRIVEIRSSNISRLQAAQQAQNMLTHYPQIRYMVGFSALDGLGILEATERRGAQNLQIFAFDDMAETLKAIKDRKIELTIVQQPEEMGAKAIKLLNDYLKGSHPQELTYTRVYEVHADTPDDMSGDNKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF23</accession>
    <name>E3EF23_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yjcK5</name>
        <name evidence="2" type="ORF">PPSC2_02905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369182.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15720"/>
    <dbReference type="EnsemblBacteria" id="ADO54543">
        <property type="protein sequence ID" value="ADO54543"/>
        <property type="gene ID" value="PPSC2_02905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02905"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_40_1_9"/>
    <dbReference type="OMA" id="AACIPDN"/>
    <dbReference type="OrthoDB" id="1501005at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="18"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="22187" checksum="E9D0700A14E161EA" modified="2011-01-11" version="1">MFYETNGVISMRSTHPGLQIRLLQVSDAEHLLEIRRENFDFFKPYEPERPEIYFTLEEQARLISNGLEAAQAGQGYTFGLFLVENNKLIGRMELSGVARGPFQNANLGYFVDPAYHGQGYATSAVKDIVRYALNELELHRIQAGVMPRNTPSHRVMEKAGFRREGLALNYLKINGVWEDHVLYAMTAEDLQNGAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF33</accession>
    <name>E3EF33_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase M15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yodJ</name>
        <name evidence="3" type="ORF">PPSC2_02955</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369192.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15770"/>
    <dbReference type="EnsemblBacteria" id="ADO54553">
        <property type="protein sequence ID" value="ADO54553"/>
        <property type="gene ID" value="PPSC2_02955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.562"/>
    <dbReference type="eggNOG" id="COG1876">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054193_1_0_9"/>
    <dbReference type="OMA" id="FEGPHEK"/>
    <dbReference type="OrthoDB" id="1593541at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009045">
        <property type="entry name" value="Hedgehog_sig/DD-Pept_Zn-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003709">
        <property type="entry name" value="Pept_M15B"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02557">
        <property type="entry name" value="VanY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55166">
        <property type="entry name" value="SSF55166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VanY" evidence="2">
        <location>
            <begin position="148"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="35"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="301" mass="32672" checksum="91FBC95CF6A8EADF" modified="2011-01-11" version="1">MKRHIQQTRTSQRWTKALIPGLILPGLLLAACQQGGSGGQESEPLKSSTTVQENVQPSTQTDAGNGSTSAGQASADTGSGQADPVMALRSQSALQATVKEEDGTAVVTNATSDTVVVNKKRSLPVGYVPDDLVEPQVPFSFEGPHEKRHLRKEAAEALEKLFDGAKKDGIELRAVSGYRSYKRQVSIFDNNVKTKGQEYASKVSAVPGTSEHQTGLSIDVSSPSVGNVLEQSFGASKEGQWLEQHAPEYGFIIRYMQGKEDVTGYVYEPWHIRYVGVDIAEDVAKQGLTLEEYFDENNIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF41</accession>
    <name>E3EF41_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">slyA3</name>
        <name evidence="2" type="ORF">PPSC2_02990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369200.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15805"/>
    <dbReference type="EnsemblBacteria" id="ADO54561">
        <property type="protein sequence ID" value="ADO54561"/>
        <property type="gene ID" value="PPSC2_02990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.569"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_18_0_9"/>
    <dbReference type="OMA" id="SDNAIMA"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="3"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="15801" checksum="AEB685E482E82D12" modified="2011-01-11" version="1">MRKKPIGKLISHLYRRNQKILSKKLAPYGIGSGGQHSFLKLILQRPGITQEQLTNELKFDKATTARSVKQLEESGYIERKTDPNDRRSQLVSPTAKALEFAPVLQAILDELNAGLVHNLSEEEEDLLIDLLQKISIDPDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF51</accession>
    <name>E3EF51_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG3</name>
        <name evidence="1" type="ORF">PPSC2_03030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369210.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15845"/>
    <dbReference type="EnsemblBacteria" id="ADO54571">
        <property type="protein sequence ID" value="ADO54571"/>
        <property type="gene ID" value="PPSC2_03030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.579"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_0_9"/>
    <dbReference type="OMA" id="WVSNAGI"/>
    <dbReference type="OrthoDB" id="1601931at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="256" mass="27608" checksum="A732364A1843F99E" modified="2011-01-11" version="1">MISIDLSHQTAVVTGGKSGIGKGIVELFIQSGAKVISADISYEEPYRVVNSQLVETQLDISKPDDIERWCNLLISETGVPDILVNCAGTSTMDYVIDSELADWEKVFSINSTGLYVASKRFAKEMVDARKPGRIIQIASQAGKNGYRAMGGYCASKHAVLGLTKVMAIELAPHQILVNAVCPGIVETPMKHRERIEGGVIRGMTAQDIYEEDCSQVPLGRTAEVEDVANVVLFLASPLSAYMTGQAINVTGGMTMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFU5</accession>
    <name>E3EFU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltraansferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370436.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21185"/>
    <dbReference type="EnsemblBacteria" id="ADO55817">
        <property type="protein sequence ID" value="ADO55817"/>
        <property type="gene ID" value="PPSC2_08710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1835"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105077_1_2_9"/>
    <dbReference type="OMA" id="YIEHLAI"/>
    <dbReference type="OrthoDB" id="1390922at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="19578" checksum="B27300A7E5AF4499" modified="2011-01-11" version="1">MINEHDFSEIYAIMESSFPASECRTFEAQKALLKHPSYRIMTEKNEQGNIVAFLAGWKFGHFRFVEHIAVDSRIRGGGLGKKLMRKFVSQSDQPVVLEVEPPVDEWSRRRIVFYERLGFHLNDFEYVQPPLREGQADLRLQIMSYPGALAQSAFAPFKEILYTEVYGLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFW1</accession>
    <name>E3EFW1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370452.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1861"/>
    <dbReference type="EnsemblBacteria" id="ADO55833">
        <property type="protein sequence ID" value="ADO55833"/>
        <property type="gene ID" value="PPSC2_08780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1851"/>
    <dbReference type="HOGENOM" id="CLU_2956304_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="7367" checksum="A1E15BAE9DBC3DF1" modified="2011-01-11" version="1">MIKKNSDFKQYFNVLFHQEYYFSVDEEDYEYYLGFTNKDLFLANYLDKVKKRFEVSLIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFX9</accession>
    <name>E3EFX9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nucleoside recognition protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylbJ1</name>
        <name evidence="2" type="ORF">PPSC2_09630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370629.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22095"/>
    <dbReference type="EnsemblBacteria" id="ADO56012">
        <property type="protein sequence ID" value="ADO56012"/>
        <property type="gene ID" value="PPSC2_09630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2030"/>
    <dbReference type="eggNOG" id="COG3314">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051469_1_0_9"/>
    <dbReference type="OMA" id="VHWISGL"/>
    <dbReference type="OrthoDB" id="819609at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="242"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="286"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="318"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="398"/>
            <end position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="46693" checksum="7C3C9FC87D0EE0FD" modified="2011-01-11" version="1">MQKETRPAPYWTTLLLGLGAILLVVAIVASPEEVFQASTQGLKLWWSIIFPAMLPFLMLSEMLIAFGLVHGLGVLLEPFMRFWFRLPGRSGWVLALGLTAGFPAAAEAVRQWAQQEDMTPLQLRRLTAIAHFCNPITILLVIGTGLLHNAAVGGLLLAVHWISGLLAGWITARLPESSRKSKKRETPAAIRRASVSRTTTSLIRSAWEATRSAKERDGRSFGKLLGETVSHAVQTLMVTGGFIIFFSVLIRLLTLYSGQVTLSMVWPAWMEIHLGSYEISRLPNDLRTQAALISAVLGWGGLCGWLQITAVTRPSDKGITFTLSRVLHGIIAFGLTLAAWTPLSHIVSNTIPAYISRSSVSSFSESVNDSGVQSVMVGASSLLTQIEGTSMYPWQLTVLSVVLLSTIILALLAVSFMTSWWSHRDSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG98</accession>
    <name>E3EG98_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">msbA2</name>
        <name evidence="11" type="ORF">PPSC2_12295</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
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        <property type="entry name" value="ABC1_TM_sf"/>
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        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
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        <property type="entry name" value="Type_1_exporter"/>
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        <property type="entry name" value="ABC_tran"/>
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        <property type="entry name" value="AAA"/>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_1"/>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
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    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="52"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="100"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="176"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="201"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="283"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="311"/>
            <end position="328"/>
        </location>
    </feature>
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        <location>
            <begin position="57"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="377"/>
            <end position="610"/>
        </location>
    </feature>
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        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="410"/>
            <end position="417"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="616" mass="68193" checksum="4301BA9099BFBFE9" modified="2011-01-11" version="1">MDKNEHTVGSKHIKMKQQGPMGRGPTEGMGTGKKANDFRKNLRQLLSYIKTYAPMIILSMVLALAGSVFNVIGPDKLSDIANLIQEGIVTGIDINAIQKIVLVLVVLYGLGLIFNYFQGFITVTVSQRLTKKMRTELSRKINHMPLKYFDATSYGNVLSRVTNDVDTIGQTLNNSLGTLVSALATFVGALIMMLYTNWIMTITGIVATLIGFSLMTVIMKHSQKYFVAQQAELGQINGHIEETYAGHNVVKVYNGEKAAKEVFHGINGRLYTNAWKSQFMSGLMMPVMMFIGNFGYVAVCIVGALLVNQHVITIGTIVAFMVYIRLFTQPLSQLAQAATNLQSAAAASERVFEFLDEEELKDESDKTMKLDNAKGDVEFKHVRFGYNEDHMIIKDFSMKAEAGQKVAIVGPTGAGKTTLVNLLMRFYELNGGEIYIDGTPISQLTRENVHKLFCMVLQDTWLFEGTIRENIVFSQDHVTDEQVEAACRAVGLHSFLKTLPQGYDTVLDDKANLSAGQKQLITIARAMIEDAPMLILDEATSSVDTRTELLIQQAMDRLTVGKTSFVIAHRLSTIKNADLILVMKDGNIIETGNHEELLGKGGFYADLYNSQFEHAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB3</accession>
    <name>E3EGB3_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">M1-297</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="primary">M1-297</name>
        <name evidence="2" type="ORF">PPSC2_00735</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
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        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13725"/>
    <dbReference type="EnsemblBacteria" id="ADO54141">
        <property type="protein sequence ID" value="ADO54141"/>
        <property type="gene ID" value="PPSC2_00735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00735"/>
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    <dbReference type="OrthoDB" id="1724438at2"/>
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        <property type="component" value="Chromosome"/>
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        <property type="entry name" value="DUF2508"/>
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    <dbReference type="Pfam" id="PF10704">
        <property type="entry name" value="DUF2508"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="12389" checksum="08907167F07AC03F" modified="2011-01-11" version="1">MWERMKQNFRRQENGKSEAEYRQELFAQIRASHAEWLRAHRLFHEATGKDEIDYAIFVLQAAERKYQIHLKSAKQQGLHRFHLPADEPGYANDTDRVHKRRAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGI9</accession>
    <name>E3EGI9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YezG3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yezG3</name>
        <name evidence="1" type="ORF">PPSC2_03290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54628.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0645"/>
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        <property type="gene ID" value="PPSC2_03290"/>
    </dbReference>
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    </dbReference>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006728">
        <property type="entry name" value="EsaG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036170">
        <property type="entry name" value="Prob_YezG_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04634">
        <property type="entry name" value="DUF600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160424">
        <property type="entry name" value="SSF160424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01741">
        <property type="entry name" value="staph_tand_hypo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="19515" checksum="BEC197600D5E2CE9" modified="2011-01-11" version="1">MDQQMDQQMDQLYPLIAEHVLSMIPDDNWNEIYLYAEILDGSREVYFYFNTTENEAFIYSHDIPEKYSVDEKIYDKLLLELQTKFKELRKIFTDNDQDAWTNLTLTLKYPGKLKIHYDYEDIIASTLTPTQRQMIFEYRYLGLLPENGKNKLFVENYFNSQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGM3</accession>
    <name>E3EGM3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yndE5</name>
        <name evidence="7" type="ORF">PPSC2_03445</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369299.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16240"/>
    <dbReference type="EnsemblBacteria" id="ADO54662">
        <property type="protein sequence ID" value="ADO54662"/>
        <property type="gene ID" value="PPSC2_03445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.672"/>
    <dbReference type="eggNOG" id="COG3949">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_0_2_9"/>
    <dbReference type="OMA" id="KTPDVWI"/>
    <dbReference type="OrthoDB" id="823978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="83"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="121"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="150"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="190"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="276"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="308"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="337"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="41392" checksum="DDB97AE1B97FE4D3" modified="2011-01-11" version="1">MFRRSDDKITTKQGAVFLTNTVLGAGILTLPRGVTEQVQTPDAWLSVLIGGAIVIFVVWIMVKLSQQFPRNTMYQYSKRIVGTVPGGFLSVLLIIYFIIIAGFEIRVLAEVTMFFLLEGTPIWAIVIPFIWVGSYLVFGGINSIARLYQIVLPISLFFLLFCFLFSLRIFEIDHLRPVLSDGILPVIKGLKSTILVFSGCEVVMTLVAFMQHPEKAFKAMAVGISIPLVLYFLTVVMVIGGLSVDSTVTSTWPTINLMRSFEIPGFLFERLEFPLLVIWVMQMFCNFCSFFFNASLGVSQVFGLKYRYAIFGLIPFIFISTMTPVRMTEVFRLGDEIGYMGIVLFFLIPVLLSIVFMIRKKGMKQNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGU7</accession>
    <name>E3EGU7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Tyrosine protein kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">epsB</name>
        <name evidence="4" type="ORF">PPSC2_05800</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369813.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18765"/>
    <dbReference type="EnsemblBacteria" id="ADO55181">
        <property type="protein sequence ID" value="ADO55181"/>
        <property type="gene ID" value="PPSC2_05800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1188"/>
    <dbReference type="eggNOG" id="COG0489">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052027_2_1_9"/>
    <dbReference type="OMA" id="MSIVMEY"/>
    <dbReference type="OrthoDB" id="1184929at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045226">
        <property type="term" value="P:extracellular polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005702">
        <property type="entry name" value="EPS_synthesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01007">
        <property type="entry name" value="eps_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AAA" evidence="3">
        <location>
            <begin position="39"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="23049" checksum="63EC2F27CF414FE5" modified="2011-01-11" version="1">MLRLNDMLITESNPSSYISESFRSLRTYIRQQVIGQKDRGTVLLLTSPESGAGKTTMIANIGVSFAQEGKKVALVDCNLHRPALHEIFGMENTGGLSAYLRGGASSKSIVRHGGLELSVVPGGDSLYNAADLLGSERMAELMEELKREYDIILLDSAPALNYTDARLIAGLTDGVILVAKHGRTKREDLRKTKQLMEQASATLVGIVMNQVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH46</accession>
    <name>E3EH46_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370233.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1629"/>
    <dbReference type="EnsemblBacteria" id="ADO55606">
        <property type="protein sequence ID" value="ADO55606"/>
        <property type="gene ID" value="PPSC2_07760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1613"/>
    <dbReference type="eggNOG" id="ENOG50307G1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2260983_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="104" mass="12112" checksum="87DE63BB1F899D1C" modified="2011-01-11" version="1">MREGLVLLELYENKLIFFEFKKKAVTLVPDIIRAEFKDAQVINEHNSKEKVIYQVYLIENHVEFTIRIITSYLNDSVTIVADEASITIRAYQALHRKLANDALD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH59</accession>
    <name>E3EH59_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mdtG</name>
        <name evidence="9" type="ORF">PPSC2_08860</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370468.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21325"/>
    <dbReference type="EnsemblBacteria" id="ADO55850">
        <property type="protein sequence ID" value="ADO55850"/>
        <property type="gene ID" value="PPSC2_08860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1868"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_57_3_9"/>
    <dbReference type="OMA" id="VIRHNVP"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="82"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="221"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="254"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="288"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="312"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="354"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="378"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="10"/>
            <end position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="406" mass="44084" checksum="13DBB98EE721989E" modified="2011-01-11" version="1">MKTWETWKINLIVLWFGQFLVNAGITMITPFLALYLAQDLHVKGEHDIGLWAGVIFAANFLTSFIFQPLWGKLADRYGRKVMLLRSGFGMALVIGCMGLVTHPWQLLALRLLNGTISGFNPASISLVSGTTPKERTGFAMGIMQSGQMAGTILGPLLGGFLADWVGFRPIFYITGALIFLASLMAMFLVKENFSKAEAARIPQISVLAGLKELSHTPQLPALFTVTFLLQFAMISTVSLLPLYVQKLYGSAEGIALVAGFVTAITGVSNMVAAPLLGRLSDKIGAHKILTIALLGTAIMLIPQAFVNEVWQLVIIRFFMGVFMGGLLPSVNALIRTYTPEGMESRSFGFNTSSLALGNMLGAVIGGVLSGFIGIEGLFIMSGVLLIVNIIWVRMKLFDRKATPHFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH78</accession>
    <name>E3EH78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370487.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21420"/>
    <dbReference type="EnsemblBacteria" id="ADO55869">
        <property type="protein sequence ID" value="ADO55869"/>
        <property type="gene ID" value="PPSC2_08955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1887"/>
    <dbReference type="eggNOG" id="ENOG5033KFH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_200493_0_0_9"/>
    <dbReference type="OMA" id="QHVERHF"/>
    <dbReference type="OrthoDB" id="2086230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024998">
        <property type="entry name" value="DUF3906"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13046">
        <property type="entry name" value="DUF3906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="7971" checksum="BAC34E70413D0901" modified="2011-01-11" version="1">MYLFKMEVDSSEGALTVILAAENEEQAFEEIDQHVERHFLYPPELKEVAIVEKKRITAGTAYVIETRKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH87</accession>
    <name>E3EH87_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Rhomboid family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydcA</name>
        <name evidence="7" type="ORF">PPSC2_09000</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370496.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21465"/>
    <dbReference type="MEROPS" id="S54.A18"/>
    <dbReference type="EnsemblBacteria" id="ADO55878">
        <property type="protein sequence ID" value="ADO55878"/>
        <property type="gene ID" value="PPSC2_09000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1896"/>
    <dbReference type="eggNOG" id="COG0705">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055068_3_1_9"/>
    <dbReference type="OMA" id="IGWEHFL"/>
    <dbReference type="OrthoDB" id="2053476at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022764">
        <property type="entry name" value="Peptidase_S54_rhomboid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01694">
        <property type="entry name" value="Rhomboid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="SSF144091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="64"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="100"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="Rhomboid" evidence="6">
        <location>
            <begin position="59"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="23353" checksum="2D793865EFC04322" modified="2011-01-11" version="1">MIFLRYENWKSYLRFYPVTCLILLINIVMFIVLTVQGGSENSLTLIRYGALINEAPFTDQLWRYVSAMFLHAGFDHLLFNSFAILVFAPPLERLLGSLRYVLLYLVTGVVGNILSIAHYNMVAETTVSVGASGAIYGIYGAFLYVALFQRSLMDDASRKTLYTLLGFGILFSFAVANINWTAHFGGLLSGFFMYGLLIRLTGQRKRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC2</accession>
    <name>E3EHC2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09160</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370530.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21630"/>
    <dbReference type="EnsemblBacteria" id="ADO55913">
        <property type="protein sequence ID" value="ADO55913"/>
        <property type="gene ID" value="PPSC2_09160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1931"/>
    <dbReference type="eggNOG" id="ENOG5032XV6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063028_0_0_9"/>
    <dbReference type="OMA" id="KLQITPM"/>
    <dbReference type="OrthoDB" id="1526851at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168215" evidence="2">
        <location>
            <begin position="33"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="353" mass="38238" checksum="6F35B0BB2075665D" modified="2011-01-11" version="1">MKKNHSGHYSVGMIAAVLIGLSAVCPFASIHAAPSAVQESNLSSAPNYNESSWVPPMESMSPATPSASPGDVSSKLPAQQQGVPEDVKRTAADTVQSLSSQPPFASWKDAELSYHPLGPGTHSWLVQVNHAGEYIGYLIIGSDPDGAYQLNEYGNGPGGPYSMDILRQSLKLLTETEFSSIDKLQITPMYEEPLLAYWLVRSSTGSQICIDAVTGDPLPVEVADGGWKHKLQNNAISSPTPFSKTQAQTVTISSDPFNPYDDLGWLQAKQKLSIYDTGQFMDALSNSPRMIFSATSINFAFGGPLSISGFQAWISPDHPSEPILYALTYHDGLSRFVPLKQLLPHGQFYRLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHE5</accession>
    <name>E3EHE5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpsB</name>
        <name evidence="7" type="ORF">PPSC2_10030</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309916.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22500"/>
    <dbReference type="EnsemblBacteria" id="ADO56097">
        <property type="protein sequence ID" value="ADO56097"/>
        <property type="gene ID" value="PPSC2_10030"/>
    </dbReference>
    <dbReference type="GeneID" id="66577909"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2114"/>
    <dbReference type="eggNOG" id="COG0052">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040318_1_2_9"/>
    <dbReference type="OMA" id="SYIDRAY"/>
    <dbReference type="OrthoDB" id="1623045at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01425">
        <property type="entry name" value="RPS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00291_B">
        <property type="entry name" value="Ribosomal_S2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001865">
        <property type="entry name" value="Ribosomal_S2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005706">
        <property type="entry name" value="Ribosomal_S2_bac/mit/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018130">
        <property type="entry name" value="Ribosomal_S2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023591">
        <property type="entry name" value="Ribosomal_S2_flav_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12534">
        <property type="entry name" value="PTHR12534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00318">
        <property type="entry name" value="Ribosomal_S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00395">
        <property type="entry name" value="RIBOSOMALS2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52313">
        <property type="entry name" value="SSF52313"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01011">
        <property type="entry name" value="rpsB_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00962">
        <property type="entry name" value="RIBOSOMAL_S2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00963">
        <property type="entry name" value="RIBOSOMAL_S2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="26208" checksum="F29D91C1D7254E59" modified="2011-01-11" version="1">MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSIAAENGTILFVGTKKQAQDSVKEEAARAGQFYINQRWLGGTLTNFQTIQKRIDRLKQLEAWEEDGTFAVLPKKEVIILRKEKDRLEKFLGGIKNMKGLPSALFIIDPRKERIAVAEARKLGIPIVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVMEANQGEETTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHG4</accession>
    <name>E3EHG4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Riboflavin biosynthesis protein</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="11">Riboflavin kinase</fullName>
                <ecNumber evidence="11">2.7.1.26</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="11">Flavokinase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="11">FMN adenylyltransferase</fullName>
                <ecNumber evidence="11">2.7.7.2</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="11">FAD pyrophosphorylase</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="11">FAD synthase</fullName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="13" type="primary">ribC</name>
        <name evidence="13" type="ORF">PPSC2_10120</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2 11">
            <text>ATP + FMN + H(+) = diphosphate + FAD</text>
            <dbReference type="Rhea" id="RHEA:17237"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="EC" id="2.7.7.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + riboflavin = ADP + FMN + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14357"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57986"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 11">Cofactor biosynthesis; FAD biosynthesis; FAD from FMN: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 11">Cofactor biosynthesis; FMN biosynthesis; FMN from riboflavin (ATP route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the ribF family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.26" evidence="11"/>
    <dbReference type="EC" id="2.7.7.2" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370726.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22590"/>
    <dbReference type="EnsemblBacteria" id="ADO56117">
        <property type="protein sequence ID" value="ADO56117"/>
        <property type="gene ID" value="PPSC2_10120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2133"/>
    <dbReference type="eggNOG" id="COG0196">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048437_0_2_9"/>
    <dbReference type="OMA" id="HRGHQAI"/>
    <dbReference type="OrthoDB" id="1504821at2"/>
    <dbReference type="UniPathway" id="UPA00276">
        <property type="reaction ID" value="UER00406"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00277">
        <property type="reaction ID" value="UER00407"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003919">
        <property type="term" value="F:FMN adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008531">
        <property type="term" value="F:riboflavin kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006747">
        <property type="term" value="P:FAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009398">
        <property type="term" value="P:FMN biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02064">
        <property type="entry name" value="FAD_synthetase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015864">
        <property type="entry name" value="FAD_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023468">
        <property type="entry name" value="Riboflavin_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002606">
        <property type="entry name" value="Riboflavin_kinase_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015865">
        <property type="entry name" value="Riboflavin_kinase_bac/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023465">
        <property type="entry name" value="Riboflavin_kinase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22749">
        <property type="entry name" value="PTHR22749"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06574">
        <property type="entry name" value="FAD_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01687">
        <property type="entry name" value="Flavokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004491">
        <property type="entry name" value="FAD_Synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00904">
        <property type="entry name" value="Flavokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82114">
        <property type="entry name" value="SSF82114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00083">
        <property type="entry name" value="ribF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 11" id="KW-0274">FAD</keyword>
    <keyword evidence="5 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6 11" id="KW-0288">FMN</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Flavokinase" evidence="12">
        <location>
            <begin position="186"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR004491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO56117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="34697" checksum="4FEEEEA6B5404ECB" modified="2011-01-11" version="1">MITVSLSYPLSDELLQQWGRPQVTAIGQFDGLHLGHASVIRKAVALAREQKVPVSVMTFHPHPKEVMKKGDYEGYLTPLADKQTILSDMGVDVLYILSFNEEFSKVSPEAFITDVLLPLQILTAVVGFDFRFGHRGAGHEDTLRKLGGELMSVYTVPPFELDGDKVSSSGIRRALQTGDLAHASRWLGRPYRIQGTVMDGEKRGRTIGFPTANLKLDDSYVIPVKGVYAVRALIGDHWINGVMNVGVKPTFHEGVLNPSFEVHLFDFNQQIYGESVLVELHHYIRPERKFSSVEELISQIGNDAQTAKKLLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHN2</accession>
    <name>E3EHN2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cysteine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ytmL</name>
        <name evidence="8" type="ORF">PPSC2_10915</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370900.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23305"/>
    <dbReference type="EnsemblBacteria" id="ADO56294">
        <property type="protein sequence ID" value="ADO56294"/>
        <property type="gene ID" value="PPSC2_10915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2311"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_1_4_9"/>
    <dbReference type="OMA" id="IGRGQWQ"/>
    <dbReference type="OrthoDB" id="847343at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="97"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="197"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="21"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="28976" checksum="3223479377355947" modified="2011-01-11" version="1">MSREFNIDYVFSFIPKMLSYLHITLFIVASSLVLGLIIGLLVALPRMYNIPFLKRVSQVYVSFFRGTPILIQLFLVYYGLPELLKLVDINSSRWDVLWFAVATYALNSGAFISEIIRSGVGAVDRGQIEAAQSVGMSGYQTFTRIILPQALAVVVPVFSNLVIGNLKDTSLAFTIGAMEMTGKSQTLGSATQHFVETYIALSFIYLVISLIVQKLFKVLENTLLRHEHRDSVQKEPAKRKGFVLRYLRSPRLSKGGKGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHP3</accession>
    <name>E3EHP3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppB5</name>
        <name evidence="7" type="ORF">PPSC2_10970</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370911.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23350"/>
    <dbReference type="EnsemblBacteria" id="ADO56305">
        <property type="protein sequence ID" value="ADO56305"/>
        <property type="gene ID" value="PPSC2_10970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2322"/>
    <dbReference type="eggNOG" id="COG0601">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036879_1_2_9"/>
    <dbReference type="OMA" id="AKDYPLM"/>
    <dbReference type="OrthoDB" id="1479518at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="92"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="129"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="285"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="93"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="317" mass="35693" checksum="A39E54A830BC9EED" modified="2011-01-11" version="1">MSSFLTKRLSYMIIILLAASMMIFFLYAMTPGDFISGNLKLSPERKAELREIYGLNKPILERYGNWLGNALHGNFGYSLAQQKPVLTLFNEYIWNSFLLAIVSTFLTWLIAVIIGVVAAYKQYSWFDTLVMVLIFAAMSVPSFFIGLYLIKIAAVDLKWLPPGSMLNTGSNATGLEYVKEVLQHMTLPVIVMTLLGLGSLTRYFRSNMIDVIQQDYVRTARAKGLKERKVLFTHALRNALLPAITLVGFELPALFGGSLIIEKIFNWPGIGQLYMQSFSLRDYPLLMGFTMLIAILSVIGTLLSDILYRIADPRVKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIK8</accession>
    <name>E3EIK8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370273.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1670"/>
    <dbReference type="EnsemblBacteria" id="ADO55646">
        <property type="protein sequence ID" value="ADO55646"/>
        <property type="gene ID" value="PPSC2_07905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1654"/>
    <dbReference type="eggNOG" id="ENOG50306MK">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1633758_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18336" checksum="E003924BC8F1734C" modified="2011-01-11" version="1">MFPIAVLAANEVPQEVEQSIEKDLGNFKDDIRKNTGFKITTTKEGENLTLDEGFKVYTVNSKAVRTGNTDRANDILKSKGYLFSIKSGQQNNGIVFSEDGKRIRSAYSDLEFPSQFEEAKKLIGYDESSKLIYDETVALISDIDGKKLWFLLERAYTWTLSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIM1</accession>
    <name>E3EIM1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YunC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yunC</name>
        <name evidence="1" type="ORF">PPSC2_07950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370286.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20655"/>
    <dbReference type="EnsemblBacteria" id="ADO55658">
        <property type="protein sequence ID" value="ADO55658"/>
        <property type="gene ID" value="PPSC2_07950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1672"/>
    <dbReference type="eggNOG" id="COG3377">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_160472_0_0_9"/>
    <dbReference type="OMA" id="KTNFMAV"/>
    <dbReference type="OrthoDB" id="1807259at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014931">
        <property type="entry name" value="DUF1805"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036493">
        <property type="entry name" value="YunC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08827">
        <property type="entry name" value="DUF1805"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102891">
        <property type="entry name" value="SSF102891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="10914" checksum="67B691D7B0EF1742" modified="2011-01-11" version="1">MIHMEPIQVGEHTFIGVEVKLPKTTLLTISNSRGYIMCGALDVVLLNERLADRKILAARAVGVKTLKELLEAPMESVTTEAEQLGIKPGMPGYEALLKLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIP9</accession>
    <name>E3EIP9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">YfkA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yfkA</name>
        <name evidence="6" type="ORF">PPSC2_08100</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370310.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20730"/>
    <dbReference type="EnsemblBacteria" id="ADO55687">
        <property type="protein sequence ID" value="ADO55687"/>
        <property type="gene ID" value="PPSC2_08100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1704"/>
    <dbReference type="eggNOG" id="COG0535">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_739187_0_0_9"/>
    <dbReference type="OMA" id="ETMINKR"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031004">
        <property type="entry name" value="rSAM_YfkAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014866">
        <property type="entry name" value="YfkB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42836:SF2">
        <property type="entry name" value="PTHR42836:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08756">
        <property type="entry name" value="YfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01097">
        <property type="entry name" value="Uncharacterised_Radical_SAM_Su"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04478">
        <property type="entry name" value="rSAM_YfkAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="5">
        <location>
            <begin position="28"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="376" mass="43105" checksum="83F65C36145B4E5F" modified="2011-01-11" version="1">MTVLQNNTLPQISPTYDPWDPIVSLRTHGRHLLTSVEMTVTHLCNMRCEHCAVGDMLVMKEAPFLPLDLMLKRLDEVEHLETISITGGEPALLDKTVDDVIVPLLKYAKERGIRSQINSNLTLDIRRYEKMLPYLDVMHISFNYLNADDFYEVGFANTGRPTPRAGAVRLYEKMIENARRLSEMGMFISAESMINYRTHTKLEGIHQLINEMGCRRHEVHPMYASNFASALPVLSLDDMRNSIDKLLDVRNQDMWMLFGTLPFFACSEREEDRKLLRRLRQEPNITVRNDPDGRNRVNVNMFTGSVYVTDFADIPAFGNIQENSLDNIFGEWLNEHPLNQTVNCHCDAAACCGPNLLVADMYYKGVDFKSRKALQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ54</accession>
    <name>E3EJ54_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glucose-6-phosphate 1-dehydrogenase</fullName>
            <shortName evidence="4">G6PD</shortName>
            <ecNumber evidence="4">1.1.1.49</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">zwf</name>
        <name evidence="7" type="synonym">zwf1</name>
        <name evidence="7" type="ORF">PPSC2_10645</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>D-glucose 6-phosphate + NADP(+) = 6-phospho-D-glucono-1,5-lactone + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:15841"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57955"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:61548"/>
            <dbReference type="EC" id="1.1.1.49"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Carbohydrate degradation; pentose phosphate pathway; D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage): step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the glucose-6-phosphate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.49" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56235.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599692.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23040"/>
    <dbReference type="EnsemblBacteria" id="ADO56235">
        <property type="protein sequence ID" value="ADO56235"/>
        <property type="gene ID" value="PPSC2_10645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2250"/>
    <dbReference type="eggNOG" id="COG0364">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013524_5_0_9"/>
    <dbReference type="OrthoDB" id="1153269at2"/>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004345">
        <property type="term" value="F:glucose-6-phosphate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00966">
        <property type="entry name" value="G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001282">
        <property type="entry name" value="G6P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022675">
        <property type="entry name" value="G6P_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022674">
        <property type="entry name" value="G6P_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23429">
        <property type="entry name" value="PTHR23429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02781">
        <property type="entry name" value="G6PD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00479">
        <property type="entry name" value="G6PD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000110">
        <property type="entry name" value="G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00079">
        <property type="entry name" value="G6PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00871">
        <property type="entry name" value="zwf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1 4" id="KW-0313">Glucose metabolism</keyword>
    <keyword evidence="2 4" id="KW-0521">NADP</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G6PD_N" evidence="5">
        <location>
            <begin position="7"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="G6PD_C" evidence="6">
        <location>
            <begin position="192"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="10"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="342"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="347"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56235.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="500" mass="56954" checksum="D4B78E2AD07E137C" modified="2015-05-27" version="2">MDSMTFVLFGATGDLAKRKIYPALYNLFVEGKIPASFSVIGMGRREVADEQFQSNVEQSIKDFSRHVNDDRAQMDQFLSAFRYCALNVNHPEDYKKLLQLAEQRENDLGIPGNRMFYLSVAPEFFDVIAHNIRESGLAETKGWKRLIIEKPFGHDLESARELNDRLSRTFAENEIYRIDHYLGKPMVQNLEALKFANPLLQGVWNNQYIANVQITASETVGVEERAGYYDHSGAIRDMVQNHMLQVLMMTAMNKPGHITADQVRDEKSKVMDALRALDPSDIASNVVRGQYTAGEINGKAVPSYKEEPDIGPDSQNDTFISARLWIDNEQWSGVPFYIRTGKRMKEKSTRIVVEFKKDNTDPYAAQGQPTDPNLLIIHVNPDEKVTLRLNSRDPLNNGQLETVLMNYHSEAKDVPEAYERLIFDALRGDSTFFAHWNEVELSWVWVQPVLEAFTRGEVPLHTYAAGSYGPEASDQLLEEQGFTWWLDEKSESSKKAVVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ56</accession>
    <name>E3EJ56_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Abasic site processing protein</fullName>
            <ecNumber evidence="7">3.4.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yoqW</name>
        <name evidence="8" type="ORF">PPSC2_10655</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the SOS response-associated peptidase family.</text>
    </comment>
    <dbReference type="EC" id="3.4.-.-" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370843.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23050"/>
    <dbReference type="EnsemblBacteria" id="ADO56237">
        <property type="protein sequence ID" value="ADO56237"/>
        <property type="gene ID" value="PPSC2_10655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2252"/>
    <dbReference type="eggNOG" id="COG2135">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035990_6_2_9"/>
    <dbReference type="OMA" id="WQLTATI"/>
    <dbReference type="OrthoDB" id="1718602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006974">
        <property type="term" value="P:cellular response to DNA damage stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018142">
        <property type="term" value="P:protein-DNA covalent cross-linking"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003738">
        <property type="entry name" value="SRAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036590">
        <property type="entry name" value="SRAP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13604">
        <property type="entry name" value="PTHR13604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02586">
        <property type="entry name" value="SRAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143081">
        <property type="entry name" value="SSF143081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0190">Covalent protein-DNA linkage</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="26518" checksum="2D25D2F34F632AF3" modified="2011-01-11" version="1">MCKRFSLSADLDEVRDHFGIQRVMYYYKTRYNMSPTQHVPIVLHQDGERVLDEFRWGFIPYWGKDCVNADLNTVRVNPSYRKMAETRRCIIPCNGFYYWRKLGKRMCAVRVVLPEQKMFAVAGLYEIWQDSRKEPLRTCTMMTVQANTDIREFDSRMPAILEADQIDSWLDPSIQNIDELLPLLRTYEQGGMSIYPVTPLVANDEHDSRECIQEMDLQWSWIKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ58</accession>
    <name>E3EJ58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Major facilitator transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yceI</name>
        <name evidence="9" type="ORF">PPSC2_10660</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370845.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23055"/>
    <dbReference type="EnsemblBacteria" id="ADO56239">
        <property type="protein sequence ID" value="ADO56239"/>
        <property type="gene ID" value="PPSC2_10660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2255"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_46_6_9"/>
    <dbReference type="OMA" id="EIFPTKD"/>
    <dbReference type="OrthoDB" id="1121832at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="220"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="283"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="307"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="341"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="369"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="15"/>
            <end position="397"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="402" mass="43623" checksum="05A35CD9E560E6DF" modified="2011-01-11" version="1">MSELTSLPPAKKRKLLFSAGLSWLFDAMDVGLLSFIVAALAKEWHLGSEQIGLLTAMNSIGMVFGAALAGILADRYGRRAILVWTLLIFSVASGLSALATGLGMLLVLRFIAGAGLGGELPVASTLVSESVPVKERGRAVVLLESFWAAGWILSALIAYFVIPKYGWQMAFILGAVPALYALYLRRAIDDSPRYKQQSVKLPLRARLASIWSGPHRKSTLMLWILWFTVVFSYYGMFLWLPSMMFMKGFELVKSFEYVLIMTLAQLPGYFTAAYLIEKLGRKFVLIIYLLLTAVSAIWFGTSETAGMLLAAGICLSFFNLGAWGAMYAYTPELYPTSARSTGVGMAAAFGRIGGVIGPFVVGILVGQGIALPSIFAIFFVAILIGAAAVWLLGTETKNQEID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJF7</accession>
    <name>E3EJF7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acyl--CoA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">acsA1</name>
        <name evidence="4" type="ORF">PPSC2_11910</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371112.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24230"/>
    <dbReference type="EnsemblBacteria" id="ADO56507">
        <property type="protein sequence ID" value="ADO56507"/>
        <property type="gene ID" value="PPSC2_11910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2523"/>
    <dbReference type="eggNOG" id="COG0365">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_59_10_9"/>
    <dbReference type="OMA" id="HAWSNLF"/>
    <dbReference type="OrthoDB" id="326708at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="23"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="436"/>
            <end position="514"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="529" mass="59100" checksum="D53398FF7A33164E" modified="2011-01-11" version="1">MTDQQQWLAPEYYNMTSEMEHHEAGKTALKWLSETGEYEEITYGELLKKANRLAGGLASLGFNKGDRVLVVVPRRIIAYVIYLACLKLGLAVIPSSEMLRAKDIAYRLRHSEARAVIAWTDVTSEVDKISDDLPALDYRIVVPGDRTVGAQGWLVLDELMEGQEDIFEAVKTHRDDMAILAYTSGTTGNPKGVVHSHGWGYAHLRITSPWLDIRASDIVWATAAPGWQKWIWSPFLSVLGNGATGFVYNGPFRPGRYLQLLQQYGVQVLCCTPTEYRIMAKTAGLDQYDLSRLRSAVSAGEPLNQEVINKFQEQFNITIRDGYGQTESTLIIGNLRDVPLRTGSMGKSIAPGLVEVVDEDGIPLAPGQVGDIAVRADLPALFHTYYHDPERKLASVHGDYFVTGDRARKDEDGYFWFEGRGDDIIISSGYTIGPFEVEEALMKHDSVQECAAVASPDEVRGHVVKAYIVLKAGIEGSPELVKELQHHVKTWTAPYKYPRKIEFIEELPKTSSGKIRRVELRELEKQSVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJH3</accession>
    <name>E3EJH3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-haloalkanoic acid dehalogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yjjG</name>
        <name evidence="1" type="ORF">PPSC2_12005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371127.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24325"/>
    <dbReference type="EnsemblBacteria" id="ADO56523">
        <property type="protein sequence ID" value="ADO56523"/>
        <property type="gene ID" value="PPSC2_12005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2539"/>
    <dbReference type="eggNOG" id="COG1011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_8_1_9"/>
    <dbReference type="OMA" id="LCENLQD"/>
    <dbReference type="OrthoDB" id="1204073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008253">
        <property type="term" value="F:5'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011951">
        <property type="entry name" value="HAD-SF_hydro_IA_YjjG/PynA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02254">
        <property type="entry name" value="YjjG/YfnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="240" mass="26995" checksum="D090FF7B4E255F11" modified="2011-01-11" version="1">MKYEIILFDVDDTLFDFKMAESHALHNTFAQFGLPQGATEYKSSYDEINSSLWREAEEGLITSAQLRVERFKRLFTVHKLDFNPDAFSAAYLRYLGEGAFLMDGAVELCDVLSECRLAIITNGIKEVQTSRIQLSPLRHVFEQIIISEEVGYQKPQAEIFDYAFTKLAISDKSKVLMVGDSLTSDIQGGNKYGIDTCWFNPSGKTNTSGIQPTYEIASLMELPSSVLSMPPVLNHTSLEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJM6</accession>
    <name>E3EJM6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Elongation factor G</fullName>
            <shortName evidence="7">EF-G</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fusA</name>
        <name evidence="9" type="ORF">PPSC2_28065</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="9 10">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
            <plasmid evidence="9 10">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385813.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0002"/>
    <dbReference type="EnsemblBacteria" id="ADO59397">
        <property type="protein sequence ID" value="ADO59397"/>
        <property type="gene ID" value="PPSC2_28065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5950"/>
    <dbReference type="HOGENOM" id="CLU_002794_4_1_9"/>
    <dbReference type="OMA" id="AATTCHW"/>
    <dbReference type="OrthoDB" id="88967at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16262">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01434">
        <property type="entry name" value="EFG_mtEFG1_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03713">
        <property type="entry name" value="EFG_mtEFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00054_B">
        <property type="entry name" value="EF_G_EF_2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041095">
        <property type="entry name" value="EFG_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009022">
        <property type="entry name" value="EFG_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035649">
        <property type="entry name" value="EFG_V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004540">
        <property type="entry name" value="Transl_elong_EFG/EF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005517">
        <property type="entry name" value="Transl_elong_EFG/EF2_IV"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14492">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03764">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00889">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00484">
        <property type="entry name" value="EF-G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7 9" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="6 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="8">
        <location>
            <begin position="8"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="17"/>
            <end position="24"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="81"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="135"/>
            <end position="138"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="692" mass="76324" checksum="A8A3012CCBF9C439" modified="2011-01-11" version="1">MAREFSLKNTRNIGIMAHIDAGKTTTTERILFYTGRTHKIGEVHEGAATMDWMEQEQERGITITSAATTAAWKGHRVNIIDTPGHVDFTVEVERSLRVLDGAVGVFSAKEGVEPQSETVWRQADRYGVPRIAYVNKMDIIGADFLNVVADMRDRLQANAVAIQLPIGAENDFLGIIDIVGQKAYMYKDDLGQNIEETEIPAEYKDKVEELRNELIEKVAELDEDLTMKYLEGEEITVEEIKAALRKGVVEVKIFPVICGSSYRNKGVQLMLDAVVDYLPAPVDVPSIQGHLEDGTEVERHSSDEEPFSALAFKIMTDPYVGKLTFFRVYSGVLQSGSYVLNATKGKRERIGRILQMHANSRQEITEVYSGDIAAAVGLKDTGTGDTLCDEKNPVILESMNFPDPVIEIAVEPKTKADQDKMAVALGKLTEEDPTLRASTNEETGQTILAGMGELHLDIIIDRMRREFKVETNVGKPQVAYRETFRAPARVEGKFVRQSGGRGQYGHVWVEFEPLEAGTGSQFESKVVGGSVPREYIGPALAGIEEQMKNGVLAGFPLVDVKATIVDGSYHDVDSNEMAFKIAGSMALKAAKDKCKPVLLEPIMKVEVTVPEEYMGDVMGMLNSRRGRIEGMDSRGGAQIIRAMVPLSEMFGYSTTLRSGTQGRGVFSMELHHYEEVPKSIAEEIVAKTKGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJS4</accession>
    <name>E3EJS4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386086.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0281"/>
    <dbReference type="EnsemblBacteria" id="ADO59672">
        <property type="protein sequence ID" value="ADO59672"/>
        <property type="gene ID" value="PPSC2_26750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5655"/>
    <dbReference type="HOGENOM" id="CLU_1766203_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="16961" checksum="9BCBEF6C0B24E28F" modified="2011-01-11" version="1">MIVTKSMDTVKGYIEYAYAYKVGMFEEDTNDPDTQFESDTFSSLKEFLVKVSPDMIEEMRKDLGVEWVWISHVSFEATSKDGEVSSSLSMFDRRKNQNITLEPFEKSSHGTVSVKLDNADIESRLMENLQKVKRIIDNALDEHVVKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJU9</accession>
    <name>E3EJU9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386111.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0306"/>
    <dbReference type="EnsemblBacteria" id="ADO59697">
        <property type="protein sequence ID" value="ADO59697"/>
        <property type="gene ID" value="PPSC2_26650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5629"/>
    <dbReference type="HOGENOM" id="CLU_1794609_0_0_9"/>
    <dbReference type="OrthoDB" id="2155540at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="17510" checksum="71F1B1A8C396ABCC" modified="2011-01-11" version="1">MHMKYFQAIADIRNHYDEMLKYFEEPRWGHLMLEARGIELSEKELLIEEREVLRYLIGCQHCFVREKNATKPSLDVVQRCFKRQLSYLERIHGCHAYNVNKHTNKLIQKNYKACRHYLFKFSLPAWYAKLPEEILTIENKYSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJW5</accession>
    <name>E3EJW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386398.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0595"/>
    <dbReference type="EnsemblBacteria" id="ADO59984">
        <property type="protein sequence ID" value="ADO59984"/>
        <property type="gene ID" value="PPSC2_28260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5992"/>
    <dbReference type="HOGENOM" id="CLU_2790080_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="7854" checksum="8271DAAC4E7645FC" modified="2011-01-11" version="1">MHKMNLFNVLLMGGCILFVYCLVRFIMGELSDAIQHPMAYLHHLYAEGKKDHTIFDFLGSLLDQIILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK16</accession>
    <name>E3EK16_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_26545</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="6 7">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
            <plasmid evidence="6 7">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386139.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0334"/>
    <dbReference type="EnsemblBacteria" id="ADO59725">
        <property type="protein sequence ID" value="ADO59725"/>
        <property type="gene ID" value="PPSC2_26545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5599"/>
    <dbReference type="eggNOG" id="COG0582">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_876747_0_0_9"/>
    <dbReference type="OMA" id="WKHINTE"/>
    <dbReference type="OrthoDB" id="745068at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02899">
        <property type="entry name" value="Phage_int_SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0614">Plasmid</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="5">
        <location>
            <begin position="1"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="4">
        <location>
            <begin position="122"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="317" mass="37397" checksum="917662BEB0E5484A" modified="2011-01-11" version="1">MSVIKWIRYYSLELKALNRSSHTVRTYGYDLQQFVLYIRDQRLPSQMDTFQFKQACQSYLLSLQTYHDEDRGEELPYDDATINRKRSSLRSFIRFLSRLNYITEDFSSEIELSNSLAQPPQVLLTYEEINEMTKILDQRIFYGKTEELRLMHRRNKVAFLTLLETGIKVWELLILKWGNILLDQNTIVIPKRKSIETRDVPCSNSLAQEFRLYLEHMRKLKNFDPSFLDGFLFFGAGKSPMIAITPKTIERMFDSLAKEAGIENKNVTPQSLRHTMVHYQIGQQKSIEELTHLLGYSRKSVAKHMYDQHEFVNIISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK68</accession>
    <name>E3EK68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59777.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886305.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0387"/>
    <dbReference type="EnsemblBacteria" id="ADO59777">
        <property type="protein sequence ID" value="ADO59777"/>
        <property type="gene ID" value="PPSC2_26280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5535"/>
    <dbReference type="HOGENOM" id="CLU_2130972_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59777.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12541" checksum="9C171D6541FDBAA2" modified="2015-05-27" version="2">MDKAILTQAQAEAIDSIQAAFHWTAEAFVREHAAKPHQWVAPCDALNGVPLDLIIRALYIGYEVKLTMEEKLLEAYKAALPYQAPPDVQSAFREGMKKACEITGIKVKWSRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK72</accession>
    <name>E3EK72_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386195.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0391"/>
    <dbReference type="EnsemblBacteria" id="ADO59781">
        <property type="protein sequence ID" value="ADO59781"/>
        <property type="gene ID" value="PPSC2_26260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5530"/>
    <dbReference type="HOGENOM" id="CLU_1990459_0_0_9"/>
    <dbReference type="OrthoDB" id="2076399at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="125" mass="14797" checksum="13A666A0CD332160" modified="2011-01-11" version="1">MEKVKLSELPDEIMLSYEDSNCTLTPDQLREQAKEDGDLLLHTWYVANEHRWHPDAKTMLRQYIETQYDGMYEDWDERAFDCLKQEHYDRIQAVLNEAFSSNHATNYWILDGPEVIIDTLDQPSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKK7</accession>
    <name>E3EKK7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386253.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0450"/>
    <dbReference type="EnsemblBacteria" id="ADO59839">
        <property type="protein sequence ID" value="ADO59839"/>
        <property type="gene ID" value="PPSC2_25975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5463"/>
    <dbReference type="HOGENOM" id="CLU_2383433_0_0_9"/>
    <dbReference type="OrthoDB" id="1432684at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="10470" checksum="B9F540ABDC3DE4AB" modified="2011-01-11" version="1">MDKKILDISHSQILLANLKKYCEAAYQRGETITVSSDAILNLLQLIEIKDKALGFYADLKNWEQYYGSLDIDSAILNDYGIIARAALNGEATNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKU3</accession>
    <name>E3EKU3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385958.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0151"/>
    <dbReference type="EnsemblBacteria" id="ADO59544">
        <property type="protein sequence ID" value="ADO59544"/>
        <property type="gene ID" value="PPSC2_27370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5793"/>
    <dbReference type="HOGENOM" id="CLU_1426256_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="20873" checksum="CFE329B7BF42C22A" modified="2011-01-11" version="1">MNRLKQLLKNNKGSFSILFVILILIGVMVVTAFVDILIESWSMQEVQSVMDTSGVSALRASVDETKLRIGEFDVEKSVAVSEYKKLVSMRLKDTKKIKSVHFNPIEIESFTEKWGTGETKKARPQVLLDSSIVIVVSGSTIFDLVPGTAEVFYNSRKGSDFEVTYLGTNNDGNIELAVRSVSRLVYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL61</accession>
    <name>E3EL61_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59623.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886178.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59623">
        <property type="protein sequence ID" value="ADO59623"/>
        <property type="gene ID" value="PPSC2_27030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5716"/>
    <dbReference type="eggNOG" id="ENOG5030506">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2082521_0_0_9"/>
    <dbReference type="OrthoDB" id="2067496at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59623.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="14214" checksum="055E2BDFE0C93497" modified="2015-05-27" version="2">MNFYNNRLVQILSVILYPISAFIILSYGDKIVSWGIPAVIAILFCFLWKNVKHLMISNALLWILSVPIWLFLIEGGPGAEVFIASLPFIIPLYIFIVFLPEIIIVLIRNSLLNKFRHRNNEQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-08-12" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC40</accession>
    <name>A0A0D5ZC40_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">serpI</name>
        <name evidence="3" type="ORF">PPSC2_07855</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1656"/>
    <dbReference type="EnsemblBacteria" id="AKA44208">
        <property type="protein sequence ID" value="AKA44208"/>
        <property type="gene ID" value="PPSC2_07855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1638"/>
    <dbReference type="eggNOG" id="COG0823">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106202_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="91"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="18919" checksum="3C383676DEA063BE" modified="2015-05-27" version="1">MVLILSSTSAYAHPGRTDSNGGHYCRTNCAKWGLQDGECHYRSSSSSSSKLTPKKSVAKPKAAKPAYKESGLRVYVNGNKLSVSSEPLIYQNTNLVPLREIAEGLGATLNYDNNSGTIGVTKGNSKMTLTIGSKIVFYNGSSETVSAAPKVIKGVTYVPAQVFARGLGAGIELDSIITL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-12-02" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC73</accession>
    <name>A0A0D5ZC73_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-344</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-344</name>
        <name evidence="2" type="ORF">PPSC2_01050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.198"/>
    <dbReference type="eggNOG" id="COG1738">
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    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990397">
        <property type="term" value="P:queuosine salvage"/>
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        <property type="entry name" value="YhhQ"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Vut_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <location>
            <begin position="26"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="75"/>
        </location>
    </feature>
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            <end position="97"/>
        </location>
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        <location>
            <begin position="109"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="19878" checksum="1B0ACC1968B5AE87" modified="2015-05-27" version="1">MKYLVILLYLTAIVTANVVTAGTNPIQLGIFIIPAGSFIIGATFILRDFVQIYVGRRTVYILIIMAMILSGVTSYLLGDGLWITFASVLTFLVSETTDTEIYTRLKFPFYLRVMYSGIVGGFLDSIIFVVVGLSPLGANFIPWNAVIYAILGQIIVKTVVQLLASGVIRLALNKRLERFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC92</accession>
    <name>A0A0D5ZC92_PAEPS</name>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
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        </source>
    </reference>
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            <dbReference type="EMBL" id="AKA44263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="20361" checksum="FF6F1572060645F0" modified="2015-05-27" version="1">MSVNGTTLFENAIAVDGTAYVPLRPISESLGTNLAVKGKTIEITTGTPSSYVVVEEQSQAMALKNNPHTNWSKELIVKHSGTVEELIEILNNDITKSEKSLTDIDRRIGAAGDDQKLIERIEKTVTVTKSPLKQRAFTFMRGISIRLPLIIGILTRLLNRNANFATMIINKFNCIALQDRFGFI</sequence>
</entry>
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    <accession>A0A0D5ZCA4</accession>
    <name>A0A0D5ZCA4_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Subtilin lantibiotic</fullName>
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        <name evidence="1" type="ORF">PPSC2_07470</name>
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    <organism evidence="1 2">
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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        <property type="gene ID" value="PPSC2_07470"/>
    </dbReference>
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    </dbReference>
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44201.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="50" mass="5396" checksum="A670595D215441D2" modified="2015-05-27" version="1">MKNQFDLDLQVTKSESASKELQADSGIICTPTCLTSILNCYTSISHCGPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCN3</accession>
    <name>A0A0D5ZCN3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
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    <organism evidence="1 2">
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    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
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                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PPSC2_21325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4533"/>
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    </dbReference>
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    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7850" checksum="D48212E694053275" modified="2015-05-27" version="1">MNITEDCQLKKVNFKINFELKIKESHSNYRRRNYKFLLKNSIYQGITYTQIHIDIFEKCKIYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCP7</accession>
    <name>A0A0D5ZCP7_PAEPS</name>
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        <recommendedName>
            <fullName evidence="1">ASCH domain-containing protein</fullName>
        </recommendedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_28210</name>
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    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ASCH" evidence="1">
        <location>
            <begin position="8"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="13699" checksum="D5D1F1A38798DBBD" modified="2015-05-27" version="1">MKGLIVRLPWIDYILDGFKTWEIRGSSTKNRGKIALIQSQSGLIVGTANLIDCKPLSLSEYQRSTSLHCIENCLEAPYKNMHAWILTDAVRLQTPIPYIHPQGAVIWVNLDKHEGLSLLNAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCX0</accession>
    <name>A0A0D5ZCX0_PAEPS</name>
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            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
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        <name>pSC2</name>
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    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0208"/>
    <dbReference type="EnsemblBacteria" id="AKA44372">
        <property type="protein sequence ID" value="AKA44372"/>
        <property type="gene ID" value="PPSC2_27125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5737"/>
    <dbReference type="HOGENOM" id="CLU_2956321_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6827" checksum="CF9447658C275C30" modified="2015-05-27" version="1">MNSSIYKIVAVNIMLTAFLLDYSVVHIIQNHRTEGVLLYGIFLRVSKKILYSPVRQWSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-12-02" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCY7</accession>
    <name>A0A0D5ZCY7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">mRNA interferase</fullName>
            <ecNumber evidence="3">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_27880</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Toxic component of a type II toxin-antitoxin (TA) system.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the PemK/MazF family.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0042"/>
    <dbReference type="EnsemblBacteria" id="AKA44387">
        <property type="protein sequence ID" value="AKA44387"/>
        <property type="gene ID" value="PPSC2_27880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5908"/>
    <dbReference type="eggNOG" id="COG2337">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_121823_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003477">
        <property type="entry name" value="PemK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011067">
        <property type="entry name" value="Plasmid_toxin/cell-grow_inhib"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33988">
        <property type="entry name" value="PTHR33988"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02452">
        <property type="entry name" value="PemK_toxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF033490">
        <property type="entry name" value="MazF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR033490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="AKA44387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="13632" checksum="106546D4E370F864" modified="2015-05-27" version="1">MVKQVQRGEIYFANFEKGEGCEQNGTRPVLIIQNDVGNRFSPTTIVALITSVTKKLDLPTHIELPNQISLLPYHSVVLLEQLKTIDKNRLEDRVSKLDQHYMQKVNEGLSISLGMHPDFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4K9</accession>
    <name>E3E4K9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fibronectin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_13795</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56908.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2945"/>
    <dbReference type="EnsemblBacteria" id="ADO56908">
        <property type="protein sequence ID" value="ADO56908"/>
        <property type="gene ID" value="PPSC2_13795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2940"/>
    <dbReference type="eggNOG" id="COG5492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041399_1_0_9"/>
    <dbReference type="OrthoDB" id="1533573at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00063">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040794">
        <property type="entry name" value="CE2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003961">
        <property type="entry name" value="FN3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036116">
        <property type="entry name" value="FN3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17996">
        <property type="entry name" value="CE2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00041">
        <property type="entry name" value="fn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49265">
        <property type="entry name" value="SSF49265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50853">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fibronectin type-III" evidence="2">
        <location>
            <begin position="123"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56908.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="32998" checksum="B67958B5A574602B" modified="2015-05-27" version="2">MRENGVFAFVPSDEPDQAYKGGYYYSKDKGATISFAFTGEKLRVLAPVWTLQSNNIEVNIDGVKIMNYSAYGSPVKHRVILFEKLNLDKGKHIVKLTNNQAGKEFEVDAIDIAEDGELLPINAPFNLDASAGDSKVTLKWDQIENAESYTVKYGTESGKYTETATATKDAYGNFIIPDLTNGTKYYFVVSAKVNSVDSEYSNEASAAPQGGGGQTDPEQPTGNRAILVVTMTTGLEKEFDLSMKEVNDFIAWYEGKQAGSGSASYAINKHDNNKGPFSSRKDYMLYDRILTFEVSEYSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S3</accession>
    <name>E3E4S3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anaphase-promoting protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371650.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02125"/>
    <dbReference type="EnsemblBacteria" id="ADO57051">
        <property type="protein sequence ID" value="ADO57051"/>
        <property type="gene ID" value="PPSC2_14475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3089"/>
    <dbReference type="eggNOG" id="COG4235">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1546127_0_0_9"/>
    <dbReference type="OMA" id="ISAQPDH"/>
    <dbReference type="OrthoDB" id="2046139at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="3"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="37"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="121"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="19874" checksum="E2F29F0A748D81BB" modified="2011-01-11" version="1">MKAEEYVQKAYQCILQNDFEQAVEWFEKAISAQPDHAEHYFRCSVTYARSGRLEQALAYAEHAVRLAPHQDEYVLHLHAQEARQYTEKARKMLEVDRATPQMHQDAILLLERAISLDPLCGDAFLLLALIYDELNEYKLAVQAAREAAALFPHNVQLANLMKKLCQQMNEQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4V6</accession>
    <name>E3E4V6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371681.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02285"/>
    <dbReference type="EnsemblBacteria" id="ADO57084">
        <property type="protein sequence ID" value="ADO57084"/>
        <property type="gene ID" value="PPSC2_14635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3122"/>
    <dbReference type="eggNOG" id="ENOG503493E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1473832_0_0_9"/>
    <dbReference type="OMA" id="ITVTPMW"/>
    <dbReference type="OrthoDB" id="1531202at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="20656" checksum="2B46498C90DEB8F3" modified="2011-01-11" version="1">MKPWTVLGGSILITTAAAILLPSLQMLDSGTAAVRETQATISPQQRVLLTDDNLVDTLNELPLTTPIASVSWEHSVLTLDVKLSKEETTPLEIYQNMAELAAFSFYGTTNVRQLLLRVVTEDEWSGERHLLLASDIRRNEWTNEALEQLRNREGAELPEDLKSRFRITVTPMWQNRFSGVYTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z5</accession>
    <name>E3E4Z5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_15185</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371794.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02805"/>
    <dbReference type="EnsemblBacteria" id="ADO57203">
        <property type="protein sequence ID" value="ADO57203"/>
        <property type="gene ID" value="PPSC2_15185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3242"/>
    <dbReference type="eggNOG" id="ENOG5033DUF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2220590_0_0_9"/>
    <dbReference type="OMA" id="YPFHVIE"/>
    <dbReference type="OrthoDB" id="2077310at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="12536" checksum="6A4185725A5D92A8" modified="2011-01-11" version="1">MMYRHAVIFWLTLALGAYGIIDMLWKGSWGFLISLLIPVFIFAVIFLLYKYQPGQRKRTPKIKPSVRTMAKTANTRKQQTTSKRKTYPFHVIEGSKGKNEEEQPKYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E575</accession>
    <name>E3E575_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372021.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3479"/>
    <dbReference type="EnsemblBacteria" id="ADO57435">
        <property type="protein sequence ID" value="ADO57435"/>
        <property type="gene ID" value="PPSC2_16290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3477"/>
    <dbReference type="eggNOG" id="ENOG5030QFV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1022490_0_0_9"/>
    <dbReference type="OrthoDB" id="2005512at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168626" evidence="1">
        <location>
            <begin position="28"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="30171" checksum="5D5A141E68AA256A" modified="2011-01-11" version="1">MKKKTFFSSALSFCLLGAVVVPSVICASSDASDSANTSSIAIKNAGKTTTGDHVITPQRARDVFNDTFENEKNPVSRFVLDPGYGHLKIMVKNTGDSTMTFSLVHTDSNKQYIVKTVGAHKSLTWDSVNSFSQGLRSGNYEIQWRAGGDIVHVTAWGVSGTDSAKVTPQRGIGVIDVRLTGGATAATGFVIPKGHGHVKLSIKNYSDHPVKVSLTHEGSNKEYISALPIAPHDTVIWRSTDEGYSSGMRSGYYTFQWRGADYKVDGHVWGVVGSQPGDVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5J4</accession>
    <name>E3E5J4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3759"/>
    <dbReference type="EnsemblBacteria" id="ADO57713">
        <property type="protein sequence ID" value="ADO57713"/>
        <property type="gene ID" value="PPSC2_17575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3755"/>
    <dbReference type="eggNOG" id="ENOG50307MQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2667679_0_0_9"/>
    <dbReference type="OrthoDB" id="2079001at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8661" checksum="756C7D66ABD6321D" modified="2011-01-11" version="1">MEGPIITCKSIGVYAHALTRGNKYIVKKEDGDKYRIIGNHGKVVWISKAHFIEGNIEVPYLEKWKFDDDPKSLIW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W3</accession>
    <name>E3E5W3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqjP</name>
        <name evidence="2" type="ORF">PPSC2_19800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58182.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324669.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07020"/>
    <dbReference type="EnsemblBacteria" id="ADO58182">
        <property type="protein sequence ID" value="ADO58182"/>
        <property type="gene ID" value="PPSC2_19800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4220"/>
    <dbReference type="eggNOG" id="COG0491">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048478_0_2_9"/>
    <dbReference type="OrthoDB" id="733552at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="28"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58182.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="336" mass="38064" checksum="C57420B4BE2FD767" modified="2015-05-27" version="2">MKLPELTPCERIDGGFQVKISMSFPLRWVNSYVIKGQHGFTIVDPGPRNLDTEAEWAFVFQQLGMSFGDISDIVVTHHHPDHYGLAGWMQQQGQARVHMSARSHKEAMMMWDAPELTTAMEKRLPSFFVQHGFPLEQVSALESHMQQAYLQVNPQPEITFIPTGIDARLELDGRFWLPVETGGHAPGHVSLYEPNSGVILCGDAVLPQISPNISLLPGSDAEPLKSYIDGLQRLGELEVAWAYPGHRNPFGYFRERTQTLLAHHEERLEKFWQLIQPEGSTAYELCIAVFGDKLGIHQLRFAMSETLAHLVELVRRERASMSEENPIARFHSFCRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D2</accession>
    <name>E3E6D2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 15">Phosphoenolpyruvate-protein phosphotransferase</fullName>
            <ecNumber evidence="6 15">2.7.3.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14 15">Phosphotransferase system, enzyme I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="23" type="primary">ptsI3</name>
        <name evidence="23" type="ORF">PPSC2_18870</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="23 24" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23 24">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 15">General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>L-histidyl-[protein] + phosphoenolpyruvate = N(pros)-phospho-L-histidyl-[protein] + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:23880"/>
            <dbReference type="Rhea" id="RHEA-COMP:9745"/>
            <dbReference type="Rhea" id="RHEA-COMP:9746"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:29979"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:64837"/>
            <dbReference type="EC" id="2.7.3.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 15 18">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 15">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 15">Belongs to the PEP-utilizing enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.7.3.9" evidence="6 15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372578.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06080"/>
    <dbReference type="EnsemblBacteria" id="ADO58001">
        <property type="protein sequence ID" value="ADO58001"/>
        <property type="gene ID" value="PPSC2_18870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4045"/>
    <dbReference type="eggNOG" id="COG1080">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007308_7_0_9"/>
    <dbReference type="OMA" id="CNAEWAL"/>
    <dbReference type="OrthoDB" id="467393at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008965">
        <property type="term" value="F:phosphoenolpyruvate-protein phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.274.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008279">
        <property type="entry name" value="PEP-util_enz_mobile_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018274">
        <property type="entry name" value="PEP_util_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000121">
        <property type="entry name" value="PEP_util_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023151">
        <property type="entry name" value="PEP_util_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036637">
        <property type="entry name" value="Phosphohistidine_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024692">
        <property type="entry name" value="PTS_EI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006318">
        <property type="entry name" value="PTS_EI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008731">
        <property type="entry name" value="PTS_EIN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036618">
        <property type="entry name" value="PtsI_HPr-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05524">
        <property type="entry name" value="PEP-utilisers_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00391">
        <property type="entry name" value="PEP-utilizers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02896">
        <property type="entry name" value="PEP-utilizers_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000732">
        <property type="entry name" value="PTS_enzyme_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47831">
        <property type="entry name" value="SSF47831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52009">
        <property type="entry name" value="SSF52009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01417">
        <property type="entry name" value="PTS_I_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00742">
        <property type="entry name" value="PEP_ENZYMES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00370">
        <property type="entry name" value="PEP_ENZYMES_PHOS_SITE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="19" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9 15" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="15" id="KW-0418">Kinase</keyword>
    <keyword evidence="13 15 18" id="KW-0460">Magnesium</keyword>
    <keyword evidence="12 15 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 15" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="23" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 15" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="15 23" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 15" id="KW-0813">Transport</keyword>
    <feature type="domain" description="PEP-utilisers_N" evidence="22">
        <location>
            <begin position="6"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="PEP-utilizers" evidence="20">
        <location>
            <begin position="152"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="PEP-utilizers_C" evidence="21">
        <location>
            <begin position="251"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="region of interest" description="PEP binding" evidence="17">
        <location>
            <begin position="454"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="19">
        <location>
            <begin position="33"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="16">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="16">
        <location>
            <position position="502"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="296"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="332"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="431"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="455"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="465"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00016544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00033235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRNR" id="PIRNR000732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR000732-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR000732-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR000732-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="Pfam" id="PF00391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="Pfam" id="PF02896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="Pfam" id="PF05524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="ADO58001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="570" mass="63069" checksum="C057376FA28164EA" modified="2011-01-11" version="1">MLKISGIAASAGIAIARAFILEHPNYAVERRAVGDVEAEIARLDAALAESQTELESIKEKTLRELGEKKAEIFASHLLILNDPELIDPVKAKIRDEQLNADYALNEVATQFVSMFENMKSAYLQERASDMRDVTKRVLNHLLGVHFVSPAEIAEETIVLAEDLTPSDTAQLNREFVKGFATNIGGRTSHSAIMARSLEIPAVVGTKNILSQAKSGDLIIVDGLDGHVFVNPTEEIIAEYRAKQVAYDKQREEWRKLRGEATVSVDGVHVELAANIGTPNDVAGVLDNGGEGVGLYRTEFLYMGRDKLPSEDVQYTAYKTVLERMESKPVVVRTLDIGGDKELPYLDLPKEMNPFLGFRAIRLCLDRQDIFRTQLRALLRASVHGNLRIMFPMIATLNEFREAKAVLLEEKEKLVAEGVSVSEEIQLGIMVEIPSTAVLADQFAKEVDFFSIGTNDLIQYTMAADRMNERVSYLYQPYNPSILRLVKMVIDAAHREGRWVGMCGEMAGDTTAIPLLLGLGLDEFSMSATSILPARSQISKLSRADMEKLAAKALDMQTAEQVVELVQSIEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E1</accession>
    <name>E3E6E1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Galactokinase</fullName>
            <ecNumber evidence="11">2.7.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Galactose kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">galK</name>
        <name evidence="15" type="synonym">galK3</name>
        <name evidence="15" type="ORF">PPSC2_18915</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>alpha-D-galactose + ATP = ADP + alpha-D-galactose 1-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13553"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28061"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58336"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="11">Carbohydrate metabolism; galactose metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 11">Belongs to the GHMP kinase family. GalK subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.6" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58010.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324644.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06125"/>
    <dbReference type="EnsemblBacteria" id="ADO58010">
        <property type="protein sequence ID" value="ADO58010"/>
        <property type="gene ID" value="PPSC2_18915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4054"/>
    <dbReference type="eggNOG" id="COG0153">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017814_2_1_9"/>
    <dbReference type="OrthoDB" id="1388391at2"/>
    <dbReference type="UniPathway" id="UPA00214"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004335">
        <property type="term" value="F:galactokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00246">
        <property type="entry name" value="Galactokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000705">
        <property type="entry name" value="Galactokinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022963">
        <property type="entry name" value="Galactokinase_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019741">
        <property type="entry name" value="Galactokinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019539">
        <property type="entry name" value="GalKase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013750">
        <property type="entry name" value="GHMP_kinase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006204">
        <property type="entry name" value="GHMP_kinase_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006203">
        <property type="entry name" value="GHMP_knse_ATP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006206">
        <property type="entry name" value="Mevalonate/galactokinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10457:SF6">
        <property type="entry name" value="PTHR10457:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10509">
        <property type="entry name" value="GalKase_gal_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08544">
        <property type="entry name" value="GHMP_kinases_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00288">
        <property type="entry name" value="GHMP_kinases_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000530">
        <property type="entry name" value="Galactokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00473">
        <property type="entry name" value="GALCTOKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00131">
        <property type="entry name" value="gal_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00106">
        <property type="entry name" value="GALACTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00627">
        <property type="entry name" value="GHMP_KINASES_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 11" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11" id="KW-0299">Galactose metabolism</keyword>
    <keyword evidence="6 11 15" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GalKase_gal_bdg" evidence="14">
        <location>
            <begin position="9"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP_kinases_N" evidence="12">
        <location>
            <begin position="115"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP_kinases_C" evidence="13">
        <location>
            <begin position="286"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="11">
        <location>
            <begin position="35"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="11">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="124"/>
            <end position="130"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="162"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="11">
        <location>
            <position position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00246"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF10509"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO58010.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="392" mass="43081" checksum="E79352EA62ADB750" modified="2015-05-27" version="2">MNSTELKKHFIEKYGESSNELLIFHAPGRVNLIGEHIDYNGGYVLPAALEFGTTLILRARNDDQIHFASTNLSYEVSIPRGEIGKSKTDEWVDYPVGVLVELAEKGVYPSSGYDLLYHGEIPNGAGLSSSASIEVVTGYAFLTTEKQKTDTVEIALLSQRAENNYVGVNCGIMDQFAVANGAANHAILLMCDTLEYRKVPFRTGAYKLVIGNTNKRRGLVDSAYNERRSQCAEALSILQQQEPSLEYLAQLDEARFGGLQHHIADETVRRRAQHVVEENARVLASVEALAANELAAFGQLMNASHDSLRDLYEVSCTELDVMVEEARRIPGTLGARMTGAGFGGCTVSLVHEDDVDRFVKEVGEAYQTRTGLEASFYVCKAGDGVKELKEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E7</accession>
    <name>E3E6E7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yndB</name>
        <name evidence="3" type="ORF">PPSC2_18940</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372593.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06150"/>
    <dbReference type="EnsemblBacteria" id="ADO58016">
        <property type="protein sequence ID" value="ADO58016"/>
        <property type="gene ID" value="PPSC2_18940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4059"/>
    <dbReference type="eggNOG" id="COG0412">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077889_0_0_9"/>
    <dbReference type="OMA" id="QFTYKPT"/>
    <dbReference type="OrthoDB" id="1160025at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029059">
        <property type="entry name" value="AB_hydrolase_5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12695">
        <property type="entry name" value="Abhydrolase_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="Abhydrolase_5" evidence="2">
        <location>
            <begin position="83"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="29266" checksum="86DE0ABD86D9C8E3" modified="2011-01-11" version="1">MRRRTRRSYNSYGTRGSRKIWKILLGILIVIVLIAGWGAWKVFTPYQPDETAAAALAEIADTVKVNEQEHWLSFEPAKRSGSGVILYPGALVKPESYAPLARRLAEKGHHVIIGKMPLNLALISPDLANEVLKAYPEEAFVIGGHSLGGVMAARYAAAHSDQIKGVFFLASYPDNKGNLKDKNLPVISLLGSDDGVIQMKNVQSGRTYLPANTLYFTVEGGNHAQFGSYGAQKGDNPAKISAVEQWNQTVTALQDWMKESVDSASKNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6T3</accession>
    <name>E3E6T3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yeaB</name>
        <name evidence="8" type="ORF">PPSC2_21275</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373054.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08505"/>
    <dbReference type="EnsemblBacteria" id="ADO58485">
        <property type="protein sequence ID" value="ADO58485"/>
        <property type="gene ID" value="PPSC2_21275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4522"/>
    <dbReference type="eggNOG" id="COG0053">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013430_3_5_9"/>
    <dbReference type="OMA" id="TINQIMW"/>
    <dbReference type="OrthoDB" id="381612at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027470">
        <property type="entry name" value="Cation_efflux_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036837">
        <property type="entry name" value="Cation_efflux_CTD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16916">
        <property type="entry name" value="ZT_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160240">
        <property type="entry name" value="SSF160240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01297">
        <property type="entry name" value="CDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="83"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="117"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="183"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="ZT_dimer" evidence="7">
        <location>
            <begin position="212"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="31182" checksum="ED337992A502E341" modified="2011-01-11" version="1">MVNVYDEIRKGERGAWVSIAAYLLLSAFKLISGYIFASSALLADGFNNVTDIVVSIAVLIGLRISQKPPDSDHTYGHFRAETIAALLASFIMAVVGLQVLIDGIGSIFKGGKQTPDITSAGVAVICAVIMLGVYLYNNRLARQINNKALLAAAKDNLSDALVSVGAAVGIIGAQFGLPWLDTVAAIVVGFIICKTAWEIFRDSTHSLTDGFDEQELSDLRSTIALIPGVEGIRDVKARVHGNHALVDVVIEVNPQLSLIEGHRISDRIEERLQEVHNTMHVHVHVEPKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6V6</accession>
    <name>E3E6V6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Gamma-aminobutyrate permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">lysP</name>
        <name evidence="8" type="ORF">PPSC2_21380</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
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        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO58508">
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        <property type="gene ID" value="PPSC2_21380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4545"/>
    <dbReference type="eggNOG" id="COG0833">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="430372at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="AA-permease/SLC12A_dom"/>
    </dbReference>
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        <property type="entry name" value="Amoino_acid_permease_CS"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AMINO_ACID_PERMEASE_1"/>
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    </dbReference>
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        </location>
    </feature>
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        </location>
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        </location>
    </feature>
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        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
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            <begin position="200"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
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        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="288"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
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            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
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            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
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            <end position="432"/>
        </location>
    </feature>
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        <location>
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        </location>
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            <end position="472"/>
        </location>
    </feature>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
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    </evidence>
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    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO58508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="488" mass="53000" checksum="07AD177A8DBF584A" modified="2011-01-11" version="1">MQHKATSDATLRKSLKARHMTMIALGGSIGTGLFLASGGAVAEAGPGGALLAYAAVGLMVYFLMTSLGELATFMPESGSFNTYAGRFVDPAFGFAMGWNFWYNWAVTIAAELAAATVLIKYWFPESHSAWWSLLFLAIIFLLNALTVKGYGESEYWFAMIKIVTVIIFLAVGVLMIFGIMGGPAVGFANFTVGDAPFHGGFFAVLGVFMAAGFSFQGTELIGVAAGESENPRDNVPRAIRQIFWRILFFYILAILVIGLIIPYTNPNLLRGDISDIGVSPFTLVFEKAGLAIAASVMNAVILTSVLSAGNSGMYAATRVLYALAREGKAPRFLGRINRRGIPMNALLITTAVGMLAFLASLYGDGVVYNWLLNASGMCGFITWVGIAVSHYRFRRAFTAQGHSLSELPYKARWFPFGPLFAFALCIIVIIGQGTDAFTGQEIDWKTMIATYMSVPLFLLLWLGYKWIKRTKIVPLKECDLSSNPSSDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E760</accession>
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    </protein>
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    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
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            <dbReference type="EMBL" id="ADO58915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="25557" checksum="091B9678774D0B75" modified="2011-01-11" version="1">MRSWMKQTAMILFCISILMMSWEGQKTDAAMTTGARETLASGVATTGLKVIPHDSIRLRILANSDRPEDQLVKREIRDAIVQQMNAWVGELDNPQSLNQARVLIDAHLPEIDRLVGSELARRGIAYDHQVELASVPFPTKMYGGLVYPAGNYEALRVTLGQGKGQNWWCVLFPPLCFIDAGSGEATAQTVSAKTSQEDNRMNAADKEPEVRFFLWDALTGLWSWVSGLFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7J1</accession>
    <name>E3E7J1_PAEPS</name>
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        <submittedName>
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        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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        <property type="gene ID" value="PPSC2_13265"/>
    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Metallo-B-lactamas"/>
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        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="33"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="28287" checksum="E8132B66F0B933E5" modified="2011-01-11" version="1">MINKLYWLPVGQLDIDRSSLNHHAQPGELVRLQIWSYLLETDHGPILIDTGMPDSFINNPDYFKNTPFEGRFIPHMSADDSIVAVLDRIGYQPDDIHAIVISHMHMDHAGGNPHFPKTPIYVQQTEADAAIGNLEYAPPECVQTNLNYRLLQGDHELVPGLQLLYTPGHSPGHQSALVTTKESGPVMLTIDVAYTQENYANDVPFDGFDREQARQSIARVQQIVQEVKPNLLFFGHNPEQVAVQPVYPQYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7P3</accession>
    <name>E3E7P3_PAEPS</name>
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        <submittedName>
            <fullName evidence="7">Glutamate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
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        <name evidence="7" type="ORF">PPSC2_13515</name>
    </gene>
    <organism evidence="7 8">
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis.</text>
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        <property type="protein sequence ID" value="ADO56848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01200"/>
    <dbReference type="EnsemblBacteria" id="ADO56848">
        <property type="protein sequence ID" value="ADO56848"/>
        <property type="gene ID" value="PPSC2_13515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2877"/>
    <dbReference type="eggNOG" id="COG0493">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000422_3_1_9"/>
    <dbReference type="OMA" id="DCVGTAH"/>
    <dbReference type="OrthoDB" id="671513at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016639">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006537">
        <property type="term" value="P:glutamate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028261">
        <property type="entry name" value="DPD_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006005">
        <property type="entry name" value="Glut_synth_ssu1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14691">
        <property type="entry name" value="Fer4_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01317">
        <property type="entry name" value="GOGAT_sm_gam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0314">Glutamate biosynthesis</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fer4_20" evidence="6">
        <location>
            <begin position="23"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_2" evidence="5">
        <location>
            <begin position="153"/>
            <end position="477"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF14691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="495" mass="54726" checksum="EB903FC5974076B5" modified="2011-01-11" version="1">MSTPTGFMEYTRQLPTDRDPAERIKDWEEFHEHMSEEELRTQGARCMDCGTPYCHTGMDLMGATLGCPVHNLIPEWNNLVYRGLWKEALDRLHKTNNFPEFTGRVCPAPCEGSCTVGLIGQSVTIKTIEEAIIEKGFEEGWVVPNPPEKRTGKRVAIVGSGPAGLAAAAQLNKAGHSVTVYERADRVGGLLMYGIPSMKLDKKVVQRRVDLLEAEGIQFITNTEIGKDIPTEQLVADYDAVVLCGGSTKPREFDIEGSDLNGVHYAMDYLNGTIKSYLDSNLEDGNYLSSKGKDVIVIGGGDTGSDCVATSLRHGCRSVTQFGTHTKAPLERDPIANPWPQFPNVYSLDYAQEEAKALFGEDPREFSIMTTKFVGDENGNLKELHTIQIQRIVDKTGRKIYQPIPGTERVFPAQIALIAIGFDGPEQTIVKEIGLETDRRSNVKARYGKYVTNVDKVFAAGDMRRGQSLVVWAINEGREAAREVDKYLMGTTVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R5</accession>
    <name>E3E7R5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pcmT</name>
        <name evidence="1" type="ORF">PPSC2_13970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371548.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01625"/>
    <dbReference type="EnsemblBacteria" id="ADO56948">
        <property type="protein sequence ID" value="ADO56948"/>
        <property type="gene ID" value="PPSC2_13970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2984"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_093128_0_0_9"/>
    <dbReference type="OMA" id="SFDVVYF"/>
    <dbReference type="OrthoDB" id="1696461at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008990">
        <property type="term" value="F:rRNA (guanine-N2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007536">
        <property type="entry name" value="16SrRNA_methylTrfase_J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36112">
        <property type="entry name" value="PTHR36112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04445">
        <property type="entry name" value="SAM_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="31016" checksum="76A88082E6127230" modified="2011-01-11" version="1">MLQDWENREEEKQMMLREKQAELLVTTGDSPSDEVVERAKLLAAELGVLYAPRRGISVAKLIAAHRVRQALVLVQGGVRLIGPEQSPMIFHPSMGFIRAKRVLKGEADPMLTAARLAPGDTVLDCTAGLGTDSLLFSIGTGSSGQVTAVESSFPVYALIKDGMRHYRSGNAVVDKAFSDIDVRYGHHLDYLRSLPNRSVDIIYFDPMFRDPLLDSSAIGPLRGLANPDALNEESIAHAKRVARKTIVLKEKRGSGEFARLGFRVEQRGTTKTVYGVIDIDSGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7U5</accession>
    <name>E3E7U5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykoM5</name>
        <name evidence="2" type="ORF">PPSC2_14120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371578.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01775"/>
    <dbReference type="EnsemblBacteria" id="ADO56978">
        <property type="protein sequence ID" value="ADO56978"/>
        <property type="gene ID" value="PPSC2_14120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3014"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_4_9"/>
    <dbReference type="OMA" id="RRIVWIV"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="3"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="156" mass="18020" checksum="0C354DCE52666E30" modified="2011-01-11" version="1">MQTTEFAKIWSRMAKDYKVHMEQQLAPSLTEAQLTVLEVLNEYGRMKPSQLIPYLATTPAAVTMLLDRMERNRLVTRFRDVKDRRIVWIVISDQGREEVERGLQIRDDFLGSALNRISQHNQNLLVYLLGKITTKSKTAVSASENEGIKEQIERAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7W6</accession>
    <name>E3E7W6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">3-isopropylmalate dehydratase small subunit</fullName>
            <ecNumber evidence="10">4.2.1.33</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Alpha-IPM isomerase</fullName>
            <shortName evidence="10">IPMI</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Isopropylmalate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">leuD</name>
        <name evidence="12" type="ORF">PPSC2_14215</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>(2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate</text>
            <dbReference type="Rhea" id="RHEA:32287"/>
            <dbReference type="ChEBI" id="CHEBI:1178"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="EC" id="4.2.1.33"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 10">Heterodimer of LeuC and LeuD.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the LeuD family. LeuD type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.33" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371598.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01870"/>
    <dbReference type="EnsemblBacteria" id="ADO56999">
        <property type="protein sequence ID" value="ADO56999"/>
        <property type="gene ID" value="PPSC2_14215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3034"/>
    <dbReference type="eggNOG" id="COG0066">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081378_0_3_9"/>
    <dbReference type="OMA" id="AFTTHTG"/>
    <dbReference type="OrthoDB" id="1384217at2"/>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009316">
        <property type="term" value="C:3-isopropylmalate dehydratase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003861">
        <property type="term" value="F:3-isopropylmalate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01577">
        <property type="entry name" value="IPMI_Swivel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.19.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01031">
        <property type="entry name" value="LeuD_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004431">
        <property type="entry name" value="3-IsopropMal_deHydase_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015928">
        <property type="entry name" value="Aconitase/3IPM_dehydase_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000573">
        <property type="entry name" value="AconitaseA/IPMdHydase_ssu_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033940">
        <property type="entry name" value="IPMI_Swivel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00694">
        <property type="entry name" value="Aconitase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00171">
        <property type="entry name" value="leuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="12" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 10" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase_C" evidence="11">
        <location>
            <begin position="1"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="200" mass="22962" checksum="ABF1B08BB3443E84" modified="2011-01-11" version="1">MEAFTTLKGIVAPVDRVNVDTDAIIPKQFLKRIERTGFGQFLFYEWRFDEAGNINPEFEPNKSRYAGASVLISRANFGCGSSREHAPWAILDYGFRCVIAPSFADIFYNNCFKNGILPIKLSEEQVEELFQRTAKHDNYQLNVDLNEKTVTDDYGLRIEFDLDEHRRQFLLQGLDDIGLTLQHESEILAYEQKRAAKQGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y1</accession>
    <name>E3E7Y1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371613.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3054"/>
    <dbReference type="EnsemblBacteria" id="ADO57014">
        <property type="protein sequence ID" value="ADO57014"/>
        <property type="gene ID" value="PPSC2_14290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3051"/>
    <dbReference type="eggNOG" id="ENOG50302YR">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1843158_0_0_9"/>
    <dbReference type="OMA" id="EHREQIN"/>
    <dbReference type="OrthoDB" id="1707716at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="14929" checksum="7AFA221C395CE60C" modified="2011-01-11" version="1">MMNFFGKKKKQQDAIEHADQLMNKGLSGLLMKGLVPKEHREQINQSLNSARQAQAAANGGLAMAATAVVISVTDTGKLVNFDPIVVLVLDVTEVNGNRYQKTLETLVSKLQIPRPGDTVGLGSNPVNPSELIYMGLVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y6</accession>
    <name>E3E7Y6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Gamma-glutamyl phosphate reductase</fullName>
            <shortName evidence="7">GPR</shortName>
            <ecNumber evidence="7">1.2.1.41</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Glutamate-5-semialdehyde dehydrogenase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Glutamyl-gamma-semialdehyde dehydrogenase</fullName>
            <shortName evidence="7">GSA dehydrogenase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">proA</name>
        <name evidence="9" type="ORF">PPSC2_14315</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + L-glutamyl 5-phosphate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19541"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58066"/>
            <dbReference type="ChEBI" id="CHEBI:58274"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.41"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-glutamate: step 2/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the gamma-glutamyl phosphate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.41" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371618.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01970"/>
    <dbReference type="EnsemblBacteria" id="ADO57019">
        <property type="protein sequence ID" value="ADO57019"/>
        <property type="gene ID" value="PPSC2_14315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3056"/>
    <dbReference type="eggNOG" id="COG0014">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030231_0_0_9"/>
    <dbReference type="OMA" id="PGVCNAM"/>
    <dbReference type="OrthoDB" id="223669at2"/>
    <dbReference type="UniPathway" id="UPA00098">
        <property type="reaction ID" value="UER00360"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004350">
        <property type="term" value="F:glutamate-5-semialdehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055129">
        <property type="term" value="P:L-proline biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd07079">
        <property type="entry name" value="ALDH_F18-19_ProA-GPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00412">
        <property type="entry name" value="ProA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012134">
        <property type="entry name" value="Glu-5-SA_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000965">
        <property type="entry name" value="GPR_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000151">
        <property type="entry name" value="GPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00407">
        <property type="entry name" value="proA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0521">NADP</keyword>
    <keyword evidence="6 7 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 7" id="KW-0641">Proline biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="8">
        <location>
            <begin position="8"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="430" mass="46663" checksum="796BAFFE13A3EFA4" modified="2011-01-11" version="1">MSDLTTNTATTADNHFSEVRTKASLAKKSAGVMNRLTTAQKNEALLAMAEALVNHAEELIAANHNDLKRGRELGTSESLLDRLKLTEERIGAIAEGLRQIAALPDPVGDTLEQIERPNGLRIEKIRVPLGVIGIIYEARPNVTVDAAGLCLKTGNPVVLRGGSAALSSNRKIIEVLQQALDATAVPREALQLIEDSDRASVNEMLTLNGLLDVIIPRGGRSLIQNVVQNATVPVIETGAGVCHTFLDATANTEMAEAITLNAKVQRPSVCNSMETLLVHSDYAQAHLTGLAERFRDAGVELRGCVRTRELAPWAVPATEEDYGTEYNDYILNVKVVHNLDEVLEHIARYGTMHSECIVTENKAHADRFLQEVDAAAVYHNASTRFTDGFEFGFGAEIGISTQKLHARGPMGLPALTSTKYRVYGTGQIRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E841</accession>
    <name>E3E841_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">YqjE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yqjE</name>
        <name evidence="7" type="ORF">PPSC2_14950</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="5">Binds 2 divalent metal cations per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peptidase M42 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371747.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02585"/>
    <dbReference type="MEROPS" id="M20.018"/>
    <dbReference type="EnsemblBacteria" id="ADO57154">
        <property type="protein sequence ID" value="ADO57154"/>
        <property type="gene ID" value="PPSC2_14950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3190"/>
    <dbReference type="eggNOG" id="COG2195">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021802_6_0_9"/>
    <dbReference type="OMA" id="NIVCDRV"/>
    <dbReference type="OrthoDB" id="1015417at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001261">
        <property type="entry name" value="ArgE/DapE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010162">
        <property type="entry name" value="PepT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008007">
        <property type="entry name" value="Peptidase_M42"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42994:SF2">
        <property type="entry name" value="PTHR42994:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001123">
        <property type="entry name" value="PepA_GA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01883">
        <property type="entry name" value="PepT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00759">
        <property type="entry name" value="ARGE_DAPE_CPG2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="6">
        <location>
            <begin position="186"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="350"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR001123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001123-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="377" mass="40739" checksum="E0EE0BD8E4F69925" modified="2011-01-11" version="1">MTVEIVKDRIVQEFMELVQVDSETKHEQEISRVLKEKFNALGLDVVEDDSRERTGHGSGNLIVTWKAEGVEQAPKIFFTCHMDTVTPGKGIKPQLGEDGWIRSDGSTILGADDKAGIAALFEAIRVVREQNIPHGQIQFVITAGEESGLMGARAMKSEVLDSDFGYALDSNGEVGSICIAAPTQARIEMRITGKSAHAGVNPEDGISAIQVASKAISKMKLGRIDKETTANIGSFEGGGATNVVCDFVLIRAEARSIVQEKVNHQIQHMREALETTTREFGAQGEFRSEVIYPAFSFTEHDEVVQVAQRAIQGLGMATSTFHSGGGSDANVFNGLGIPTVNLAVGYQNIHTTEEKIKADDLVKVAEVVVALIQETTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E842</accession>
    <name>E3E842_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">Octanoyltransferase</fullName>
            <ecNumber evidence="6 7">2.3.1.181</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Lipoate-protein ligase B</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Lipoyl/octanoyl transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 12" type="primary">lipB</name>
        <name evidence="12" type="ORF">PPSC2_14955</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6 7">Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6 7">
            <text>L-lysyl-[protein] + octanoyl-[ACP] = H(+) + holo-[ACP] + N(6)-octanoyl-L-lysyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17665"/>
            <dbReference type="Rhea" id="RHEA-COMP:9636"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:9928"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78463"/>
            <dbReference type="ChEBI" id="CHEBI:78809"/>
            <dbReference type="EC" id="2.3.1.181"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6 7">Protein modification; protein lipoylation via endogenous pathway; protein N(6)-(lipoyl)lysine from octanoyl-[acyl-carrier-protein]: step 1/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="6">In the reaction, the free carboxyl group of octanoic acid is attached via an amide linkage to the epsilon-amino group of a specific lysine residue of lipoyl domains of lipoate-dependent enzymes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the LipB family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.181" evidence="6 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371748.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02590"/>
    <dbReference type="EnsemblBacteria" id="ADO57155">
        <property type="protein sequence ID" value="ADO57155"/>
        <property type="gene ID" value="PPSC2_14955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3192"/>
    <dbReference type="eggNOG" id="COG0321">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035168_1_3_9"/>
    <dbReference type="OMA" id="GEVTYHC"/>
    <dbReference type="OrthoDB" id="1806796at2"/>
    <dbReference type="UniPathway" id="UPA00538">
        <property type="reaction ID" value="UER00592"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033819">
        <property type="term" value="F:lipoyl(octanoyl) transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16444">
        <property type="entry name" value="LipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00013">
        <property type="entry name" value="LipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000544">
        <property type="entry name" value="Octanoyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020605">
        <property type="entry name" value="Octanoyltransferase_CS"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016262">
        <property type="entry name" value="LPLase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00214">
        <property type="entry name" value="lipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01313">
        <property type="entry name" value="LIPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="11">
        <location>
            <begin position="33"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6 9">
        <location>
            <begin position="78"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6 9">
        <location>
            <begin position="146"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6 9">
        <location>
            <begin position="165"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="6 8">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <feature type="site" description="Lowers pKa of active site Cys" evidence="6 10">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR016262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR016262-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR016262-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR016262-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="26233" checksum="C947E62E86144A92" modified="2011-01-11" version="1">MNRRPLDVTYTNRMEYAHAWDVQKEIVGKLDAGEARETLMLLQHPPTYTIGSQRHPEHLLLTPEQLKEKGISVFQIDRGGDITYHGPGQLVGYPLLVLGNREALNLHGYLRSLEEVIIQLLASYGIEGSRKPEYTGVWIGNLKIAAIGVKFNKCKHRRGFVTSHGFAFNIKSGIQHEGFEGIVPCGIQEYGVTSLEDCTQQSFSVEQIAKEIVPYFEQQFSFAAQWQTHSFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="80" xmlns="http://uniprot.org/uniprot">
    <accession>E3E896</accession>
    <name>E3E896_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Tyrosine--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Tyrosyl-tRNA synthetase</fullName>
            <shortName evidence="8">TyrRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">tyrS</name>
        <name evidence="11" type="ORF">PPSC2_15595</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + H(+) + L-tyrosyl-tRNA(Tyr)</text>
            <dbReference type="Rhea" id="RHEA:10220"/>
            <dbReference type="Rhea" id="RHEA-COMP:9706"/>
            <dbReference type="Rhea" id="RHEA-COMP:9707"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78536"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.1" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371875.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03245"/>
    <dbReference type="EnsemblBacteria" id="ADO57288">
        <property type="protein sequence ID" value="ADO57288"/>
        <property type="gene ID" value="PPSC2_15595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3330"/>
    <dbReference type="eggNOG" id="COG0162">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024003_5_0_9"/>
    <dbReference type="OMA" id="VHPRDAK"/>
    <dbReference type="OrthoDB" id="402899at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004831">
        <property type="term" value="F:tyrosine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006437">
        <property type="term" value="P:tyrosyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00805">
        <property type="entry name" value="TyrRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02007">
        <property type="entry name" value="Tyr_tRNA_synth_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002307">
        <property type="entry name" value="Tyr-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024088">
        <property type="entry name" value="Tyr-tRNA-ligase_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024108">
        <property type="entry name" value="Tyr-tRNA-ligase_bac_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11766">
        <property type="entry name" value="PTHR11766"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11766:SF1">
        <property type="entry name" value="PTHR11766:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01040">
        <property type="entry name" value="TRNASYNTHTYR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00234">
        <property type="entry name" value="tyrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="10">
        <location>
            <begin position="355"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="56"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="240"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="46984" checksum="F855F804907A399F" modified="2011-01-11" version="1">MKWEELKPEQQAEVERQLEVIRRGVAEIVPEDELKRKVVKSVVSGEPLKIKLGLDPSAPDIHIGHTVVMHKLRQFQELGHQVQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAQTYKEQIFKILDPEKTKVYYNSEWLGPMSFADVVTLSAKVTVARMLERDDFTKRYQNGLPISIHEFFYPLMQGMDSVALQSDIELGGTDQKFNLLMGRTLQKEYGVEPQATITLPLLEGLDGVQKMSKSLGNYIGVDEEPNEIYGKSMSVPDELMLKYFELATDITNEELAELAKGVKEGSVHPRDAKMKLAGTLVRMYHGEEAAEAAKQHFVTVFQQRALPDDIEEFTLTADQLEEGGIRVIQLLTHLGFAASNGEAKRSIQQGSVKINEEKWTDVNEAYKPQEGDIVQVGKRKFAKIKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8E2</accession>
    <name>E3E8E2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-entry nuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">comI</name>
        <name evidence="1" type="ORF">PPSC2_15810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371920.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03505"/>
    <dbReference type="EnsemblBacteria" id="ADO57334">
        <property type="protein sequence ID" value="ADO57334"/>
        <property type="gene ID" value="PPSC2_15810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3375"/>
    <dbReference type="eggNOG" id="COG3209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_150636_0_0_9"/>
    <dbReference type="OMA" id="MCKEGGE"/>
    <dbReference type="OrthoDB" id="2047129at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029476">
        <property type="entry name" value="DNase_NucA_NucB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14040">
        <property type="entry name" value="DNase_NucA_NucB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="15964" checksum="D185A39210436FEA" modified="2011-01-11" version="1">MKKKLLSFIALVLLAVGAYWVEGDNLFTKITGENPPSSAQVTLQFPSGRYPETAQHIKEAIQAGKSPVCTIDREGAEQNRKHSLAGVPTRKGFDRDEWPMAMCSEGGKGANVKYIAPKDNRGAGSWVSHQLDQYEDGTRVKFVIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA28</accession>
    <name>E3EA28_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">Aminopyrimidine aminohydrolase</fullName>
            <ecNumber evidence="6 8">3.5.99.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">tenA</name>
        <name evidence="10" type="ORF">PPSC2_19700</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>4-amino-5-aminomethyl-2-methylpyrimidine + H2O = 4-amino-5-hydroxymethyl-2-methylpyrimidine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:31799"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:63416"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>H2O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17509"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:17957"/>
            <dbReference type="ChEBI" id="CHEBI:18385"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the TenA family.</text>
    </comment>
    <dbReference type="EC" id="3.5.99.2" evidence="6 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372733.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06920"/>
    <dbReference type="EnsemblBacteria" id="ADO58161">
        <property type="protein sequence ID" value="ADO58161"/>
        <property type="gene ID" value="PPSC2_19700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4200"/>
    <dbReference type="eggNOG" id="COG0819">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077537_3_0_9"/>
    <dbReference type="OMA" id="SAHHYIR"/>
    <dbReference type="OrthoDB" id="1537025at2"/>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050334">
        <property type="term" value="F:thiaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016084">
        <property type="entry name" value="Haem_Oase-like_multi-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004305">
        <property type="entry name" value="Thiaminase-2/PQQC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027574">
        <property type="entry name" value="Thiaminase_II"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03070">
        <property type="entry name" value="TENA_THI-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48613">
        <property type="entry name" value="SSF48613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04306">
        <property type="entry name" value="salvage_TenA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0784">Thiamine biosynthesis</keyword>
    <feature type="domain" description="TENA_THI-4" evidence="9">
        <location>
            <begin position="9"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="26968" checksum="540C14691442EEED" modified="2011-01-11" version="1">MSFSQELRRQADGIFQAIYEHPFVRGIAEGNLTREQLIHYVKQDFEYLNAYMRIYGIAISKSTSREDMAVFNEQISFILNSEVHPHQNFCAIAGVTYEEMQGYPLAPSAHHYIRHMLTVAHEGSLGEIMAVLLPCPWTYLEIGRRLMDEVRPDESHPFYEWICFYGNQIEDVTSKYRERVDAWANVATAAEQERMIEHFMLSCQLEYMFWDMAYKQEQWPVQMRATVLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA35</accession>
    <name>E3EA35_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372898.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58327">
        <property type="protein sequence ID" value="ADO58327"/>
        <property type="gene ID" value="PPSC2_20435"/>
    </dbReference>
    <dbReference type="GeneID" id="66575970"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4359"/>
    <dbReference type="eggNOG" id="ENOG50305WD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2274599_0_0_9"/>
    <dbReference type="OMA" id="INCDMDA"/>
    <dbReference type="OrthoDB" id="1737958at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12328" checksum="A2F40321AAA7D233" modified="2011-01-11" version="1">MRVNLKFTNKGQVAVEKFNNEELIEIFSRYIKTLCKKYDISVTVPEDLNEQILEEGTVKVVLDKINCDMDAFFKELSRDIKVPLVKRLGTKLDNVFKTEVVEQEQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA96</accession>
    <name>E3EA96_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Methylated-DNA--protein-cysteine methyltransferase</fullName>
            <ecNumber evidence="7">2.1.1.63</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">6-O-methylguanine-DNA methyltransferase</fullName>
            <shortName evidence="7">MGMT</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">O-6-methylguanine-DNA-alkyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">adaB</name>
        <name evidence="10" type="ORF">PPSC2_20730</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>a 4-O-methyl-thymidine in DNA + L-cysteinyl-[protein] = a thymidine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:53428"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:13555"/>
            <dbReference type="Rhea" id="RHEA-COMP:13556"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:137386"/>
            <dbReference type="ChEBI" id="CHEBI:137387"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 7">
            <text>a 6-O-methyl-2'-deoxyguanosine in DNA + L-cysteinyl-[protein] = a 2'-deoxyguanosine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:11367"/>
            <dbReference type="Rhea" id="RHEA-COMP:11368"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:85445"/>
            <dbReference type="ChEBI" id="CHEBI:85448"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="7">This enzyme catalyzes only one turnover and therefore is not strictly catalytic. According to one definition, an enzyme is a biocatalyst that acts repeatedly and over many reaction cycles.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MGMT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.63" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372957.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07975"/>
    <dbReference type="EnsemblBacteria" id="ADO58388">
        <property type="protein sequence ID" value="ADO58388"/>
        <property type="gene ID" value="PPSC2_20730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4421"/>
    <dbReference type="eggNOG" id="COG0350">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_52_2_9"/>
    <dbReference type="OMA" id="CGATITY"/>
    <dbReference type="OrthoDB" id="1327994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003908">
        <property type="term" value="F:methylated-DNA-[protein]-cysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006307">
        <property type="term" value="P:DNA dealkylation involved in DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06445">
        <property type="entry name" value="ATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00772">
        <property type="entry name" value="OGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001497">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014048">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036217">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNAb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008332">
        <property type="entry name" value="MethylG_MeTrfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023546">
        <property type="entry name" value="MGMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036631">
        <property type="entry name" value="MGMT_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01035">
        <property type="entry name" value="DNA_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02870">
        <property type="entry name" value="Methyltransf_1N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46767">
        <property type="entry name" value="SSF46767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53155">
        <property type="entry name" value="SSF53155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00589">
        <property type="entry name" value="ogt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00374">
        <property type="entry name" value="MGMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4 7 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_1N" evidence="9">
        <location>
            <begin position="9"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="DNA_binding_1" evidence="8">
        <location>
            <begin position="91"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; methyl group acceptor" evidence="7">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="177" mass="19906" checksum="486816DCF936A232" modified="2011-01-11" version="1">MVHQMNKTIYWSLLTHEDWNLYIAATSEGLCYVGSLNQPVEELITWAGSRFPDSPLVEEDIVLQLYAKELIEYFQGERTHFTFPFDFHGTAFQMAVWNALCNIPYGETQSYSDIANAIQKPNSVRAVGSAIGANPILVTIPCHRVIGKNGALTGYRGGLDMKVKLLQLEKNRTHKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAA3</accession>
    <name>E3EAA3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transketolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372964.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08010"/>
    <dbReference type="EnsemblBacteria" id="ADO58395">
        <property type="protein sequence ID" value="ADO58395"/>
        <property type="gene ID" value="PPSC2_20765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4428"/>
    <dbReference type="eggNOG" id="COG3959">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009227_4_1_9"/>
    <dbReference type="OMA" id="GQGYIAQ"/>
    <dbReference type="OrthoDB" id="1543182at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd02012">
        <property type="entry name" value="TPP_TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="1">
        <location>
            <begin position="12"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="30950" checksum="EABF8982C7DA14C9" modified="2011-01-11" version="1">MEILDLKIKAAQIRKDLLTIIHRAKTGHTGGSLSNTDILTALYYEIMNIDIANPKWEERDRFIASKGHSVESLWCILADLGFFPKEELETYSQFGTRLIGHPNNKVPGVEMNTGALGHGLPISVGMALAAKRDGRSYRVFCLMGDGEQAEGSNWEAAMAGAHYKLDNLVGIIDRNGLQISGTTEEVMGLEPLEEKWAAFGWNVISIDGNSMEELIHTFRNVPEIEGKPTLVLANTIKGKGVSFAEGVPGWHHRIPSDDELERALAELTQEIDELSGEGQVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAH1</accession>
    <name>E3EAH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ring-cleaving dioxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykcA</name>
        <name evidence="2" type="ORF">PPSC2_21755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373156.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08890"/>
    <dbReference type="EnsemblBacteria" id="ADO58589">
        <property type="protein sequence ID" value="ADO58589"/>
        <property type="gene ID" value="PPSC2_21755"/>
    </dbReference>
    <dbReference type="GeneID" id="66575718"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4629"/>
    <dbReference type="eggNOG" id="COG0346">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057821_0_0_9"/>
    <dbReference type="OMA" id="PHAGQTR"/>
    <dbReference type="OrthoDB" id="1335734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="5"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="156"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="36330" checksum="EC7D293705FBAF70" modified="2011-01-11" version="1">MKLLGLHHVSAITAAAAKNVEFYTQVLGLRLIKKTVNQDDVSVYHLFYGDERGTAGTEVTFFEIPHAGQTRTGNNSISALSLRVPNDKALNYWKNRFEQLDVKHGEIIDQAGRLALSFEDFEGQRFFLVSDEHDHGMRGGTPWEKSPVPAEYGIVGLGPVHLTIPKAENTILILEQVMGFRKKGSYPSPVAGQPDVVIYETGEGGTGTEVHLEERNDLPQERPGRGSVHHVAFRVETEEELKQWVERIGQLQISNSGFVDRFYFRSLYFREPNGILFELATDGPGFDTDEELEFLGESLALPPFLEPRRASIEANLKPLNTKHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAN9</accession>
    <name>E3EAN9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_22805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373336.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58797">
        <property type="protein sequence ID" value="ADO58797"/>
        <property type="gene ID" value="PPSC2_22805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4829"/>
    <dbReference type="HOGENOM" id="CLU_2194366_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168754" evidence="1">
        <location>
            <begin position="24"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="11536" checksum="E68AE0CD30DF26B7" modified="2011-01-11" version="1">MKKIVSALAICVLALSLSSSVFASGSTLTFDNYQGKNALGTTSIQDLYKISKGGYLRLEDYSLVIVSNNGVLVSESKSIIKGMNYGTANVKVFNSSGIFIKTIQVNVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAP4</accession>
    <name>E3EAP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_22820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373341.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58802">
        <property type="protein sequence ID" value="ADO58802"/>
        <property type="gene ID" value="PPSC2_22820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4833"/>
    <dbReference type="eggNOG" id="ENOG50305SQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1968404_0_0_9"/>
    <dbReference type="OMA" id="CAPLAEY"/>
    <dbReference type="OrthoDB" id="1601134at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="15174" checksum="AC06D64A1F7CC816" modified="2011-01-11" version="1">MVKPLMFMRWCEYYGLSDRETDFVSFFMMNFSAARSGNQPKLKEQFVEIQKKAFPEYPFDISPEELDYNKFEELMKRVLSIHFDTAELLYSFYLQKLCAPLAEYILSTGDAEPARIYYELIQKDKVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAR9</accession>
    <name>E3EAR9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Precorrin-2 C20-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">cbiL</name>
        <name evidence="9" type="ORF">PPSC2_23665</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373519.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11170"/>
    <dbReference type="EnsemblBacteria" id="ADO58983">
        <property type="protein sequence ID" value="ADO58983"/>
        <property type="gene ID" value="PPSC2_23665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5009"/>
    <dbReference type="eggNOG" id="COG2243">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076014_2_1_9"/>
    <dbReference type="OMA" id="MEYPVTT"/>
    <dbReference type="OrthoDB" id="1209876at2"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030788">
        <property type="term" value="F:precorrin-2 C20-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11645">
        <property type="entry name" value="Precorrin_2_C20_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012382">
        <property type="entry name" value="CobI/CbiL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006364">
        <property type="entry name" value="CobI/CbiL/CobIJ_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036427">
        <property type="entry name" value="Precrrn-2_mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01467">
        <property type="entry name" value="cobI_cbiL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="4 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="8">
        <location>
            <begin position="8"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR036427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="238" mass="26243" checksum="C902D9EC1BEA9E25" modified="2011-01-11" version="1">MNTAATGTLYGVGVGPGDPELITVKAYRMIQECAVVAYPKKRRGGKSYAHEIVELYVNPEEKEMLGLIFPMTKDPVVLEREWNKTVVACWEALSQGKDVAFVTEGDPNLYSTFIHLARLMKDLHPEVPIVSIPGISSVLGAAAALELPLADGDQQVGIIPATDDREAMKRAIENHDTVVFIKVAKVLDLILDVLDELNLGDHASVITKVTSPYEMVWRNARELRGQELEYLSLMVVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT2</accession>
    <name>E3EAT2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gerKA</name>
        <name evidence="4" type="ORF">PPSC2_23730</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373532.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11235"/>
    <dbReference type="EnsemblBacteria" id="ADO58996">
        <property type="protein sequence ID" value="ADO58996"/>
        <property type="gene ID" value="PPSC2_23730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5022"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021639_4_1_9"/>
    <dbReference type="OMA" id="EYTERPD"/>
    <dbReference type="OrthoDB" id="576172at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004995">
        <property type="entry name" value="Spore_Ger"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03323">
        <property type="entry name" value="GerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005690">
        <property type="entry name" value="GerBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="329"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="403"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="456"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="521"/>
            <end position="542"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="542" mass="61029" checksum="260620C618118754" modified="2011-01-11" version="1">MKKGRFPKLPKLPWSRRAIPTGERKTRNSSRVPKGLPESSWLEEPLRSSLEDNRVALRDIFKECSDIVYRELMISPERKGLLAYFEGTVKSEDLQDHILRPVILGMMLKDPEVNGKLEPLDETRISMSQTKTMDEWKQVSAAILDGNAALFVDGTARAYIFSAKGGVRRGVEEPQTEAVIRGPREGFTETLRVNTALLRFKLKTSKLKMHSMTLGTETQTSVVLTYVEGIIDPKLVEDVKKRLSDIKIDGVLETGYIEELIEDHPYSPFPQMEYTERPDTVTAQLLEGRFAIFVDGTPFALIGPVTMWQMMQASEDYYERFFISNMVRWIRFLFLIMALFLPALYVAVTTYHHDMLPTTLILSIAAARESIPFPALVEALMMEISFEALREAGIRLPKTVGQAVSILGALVIGQAAVQAGIVSAPIVIVVSLTGIASFTIPRFNFAITVRLLRFPIMLMAGLFGLFGIIIATTLIATHLTKLTSFGVPYMSGYSPYNHMDQKDIIVRAPWWKMTKRPSWIGKDNNKRAKKEMNGSPKTEEGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB16</accession>
    <name>E3EB16_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Gluconokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gntK3</name>
        <name evidence="4" type="ORF">PPSC2_25070</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FGGY kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373829.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12565"/>
    <dbReference type="EnsemblBacteria" id="ADO59296">
        <property type="protein sequence ID" value="ADO59296"/>
        <property type="gene ID" value="PPSC2_25070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5313"/>
    <dbReference type="eggNOG" id="COG1070">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009281_3_2_9"/>
    <dbReference type="OMA" id="SDAMHFK"/>
    <dbReference type="OrthoDB" id="1619686at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046316">
        <property type="term" value="F:gluconokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019521">
        <property type="term" value="P:D-gluconate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000577">
        <property type="entry name" value="Carb_kinase_FGGY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018483">
        <property type="entry name" value="Carb_kinase_FGGY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006002">
        <property type="entry name" value="Gluconate_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000538">
        <property type="entry name" value="GlpK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01314">
        <property type="entry name" value="gntK_FGGY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00445">
        <property type="entry name" value="FGGY_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FGGY_N" evidence="2">
        <location>
            <begin position="4"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="3">
        <location>
            <begin position="256"/>
            <end position="451"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="512" mass="57157" checksum="45D8E3A0DA61F133" modified="2011-01-11" version="1">MTNYMLGIDIGTTSTKAVLFSEKGEVIQQENIGYPLYTPDIATAEQNPEEIFQAVLQATSNIMKHHSQKKLSFVSFSSAMHSVIAMDEHDRPLTPCITWADNRSEAWAHQIKDDLNGQEVYRRTGTPIHPMSPLTKIAWIVNDLPEIAIKVKKYIGIKEYIFKKLFDLYVVDYSLASAMGMMNLEKLDWDEEALKIAGITRSQLSELVPTTKIFTDCNSVLAKEMGIDPQTPFVIGASDGVLSNLGVNAIRKGEVAVTIGTSGAIRTIIDKPQTDEKGRIFCYALTEKHWVIGGPVNNGGMVLRWIRDELASSEVETAKRLGIDPYDVLTKIAERVRPGSDGLLFHPYLAGERAPLWNPDVRGSFFGLTMSHKKEHMIRAALEGVIYNLYTVFLALTECMDGPVTRIQATGGFARSDVWRQMMSDIFASEVVVPESYESSCLGACILGLYATGKIQSFEVVSEMIGSTNKHAPKEEATKEYRKLLPIFINLSRVLEDDYTRIANYQRSLIKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB53</accession>
    <name>E3EB53_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Elongation factor G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">tet3</name>
        <name evidence="6" type="ORF">PPSC2_25240</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373866.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12735"/>
    <dbReference type="EnsemblBacteria" id="ADO59333">
        <property type="protein sequence ID" value="ADO59333"/>
        <property type="gene ID" value="PPSC2_25240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5350"/>
    <dbReference type="eggNOG" id="COG0480">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002794_5_1_9"/>
    <dbReference type="OMA" id="GITIFSH"/>
    <dbReference type="OrthoDB" id="466142at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03711">
        <property type="entry name" value="Tet_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035650">
        <property type="entry name" value="Tet_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005517">
        <property type="entry name" value="Transl_elong_EFG/EF2_IV"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03764">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00889">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="6" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="5">
        <location>
            <begin position="1"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="654" mass="73384" checksum="E043C0169703783E" modified="2011-01-11" version="1">MKRLTIGLFAHVDAGKTTFAEQLLYHTNSIRSRGRVDHQDAFLDSHDIERARGITVFADQAVIEYKGDSYYIIDTPGHVDFSPEMERAIQVIDYAILIVSAVEGVQGHTETVWQLLRKHRIPTFFFINKTDRIGADAGRTEADIRQQLTREVCCITQSFADGIVGEPLREAMAERDEVLLEAFLEGREDSGFWLEALQRMIAAGLLFPCAYGSALQDTGVIEFLDQLHLLATTTYDENASFQGRVYKIRHDAGGARLTFIKALGGRLKVREQLSYESGGVQYDEKITRLFLFNGLKSQPVEQVEAGDLFAVTGLSAAEAGQGLGSISDKLAYDSEPTLQSKVLFDNSLHVQKVLGAFRTLEAEEPSLNVVWDEKLQEISIRVMGLIQLEVLEQLVRERFGLAISFGQPEILYKETIQSTVKGYGHFEPLRHYAEVHLLIEPGERGSGIMFDSRCHADDLNVSYQNLIRNHLYEREHHGLLTGMPVTDVNITLLKGRAHKEHTHGGDFREAAFRALRQGLEKADNVLLEPYYDFKIKVNIDEMGRVLSDIQRASGIFNPPQTIGTQAVVTGRVPVSTFMNYSAEFASFTHGRGSIRCVFSGYDRCHNTEEVIERMGYRKEADPLYTSSSIFCAKGAGYSVPWDEAEAKMHLELEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB68</accession>
    <name>E3EB68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">PTS mannose transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">licA3</name>
        <name evidence="7" type="ORF">PPSC2_20785</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5">Binds 1 Mg(2+) ion per trimer.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372969.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08030"/>
    <dbReference type="EnsemblBacteria" id="ADO58400">
        <property type="protein sequence ID" value="ADO58400"/>
        <property type="gene ID" value="PPSC2_20785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4433"/>
    <dbReference type="eggNOG" id="COG1447">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_152490_0_0_9"/>
    <dbReference type="OMA" id="MEQSRMA"/>
    <dbReference type="OrthoDB" id="2038379at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00215">
        <property type="entry name" value="PTS_IIA_lac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003188">
        <property type="entry name" value="PTS_IIA_lac/cel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036542">
        <property type="entry name" value="PTS_IIA_lac/cel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34382">
        <property type="entry name" value="PTHR34382"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02255">
        <property type="entry name" value="PTS_IIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000699">
        <property type="entry name" value="PTS_IILac_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46973">
        <property type="entry name" value="SSF46973"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51095">
        <property type="entry name" value="PTS_EIIA_TYPE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="4">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <note>ligand shared between all trimeric partners</note>
        </ligand>
    </feature>
    <feature type="modified residue" description="Phosphohistidine; by HPr" evidence="6">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000699-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000699-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="118" mass="13022" checksum="1EC7AB25292C5750" modified="2011-01-11" version="1">MEEYQEIIMGIITNSGVAKSKAMDAIALAQKGNTQLAAERLEESKAELVKAHKSQTRLIQQEAGGTVHEVTLLMVHAQDHLMSAITTKDLAGHMIELYNRLYRYEEITNHTSNGGNNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBI3</accession>
    <name>E3EBI3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pmxC</name>
        <name evidence="10" type="ORF">PPSC2_22070</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373223.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EBI3"/>
    <dbReference type="STRING" id="886882.PPSC2_c4712"/>
    <dbReference type="EnsemblBacteria" id="ADO58657">
        <property type="protein sequence ID" value="ADO58657"/>
        <property type="gene ID" value="PPSC2_22070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4697"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="LPMVRVH"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="184"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="266"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="45"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="358"/>
            <end position="594"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="391"/>
            <end position="398"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="608" mass="67595" checksum="82CC0D07C754E268" modified="2011-01-11" version="1">MEADRQPSVLEQGTAAPSKRQTAYAAWKAFRWLMSYVSRHKGWMIVGVLSAIAAAVIEIWTGSLIEQLTTQAEKGAGPIVLQIVYAVFVVILIGVPAKFFMSFGVERSSASAVQDIRNHVMRHIGKLPVSYLEKQHSGDVLSRINNDLQLIQQFMIRDLAQWFYHPLLFIGCFAYLIYLQWELMLYSLLLFPVALLVSQWIGKQLERLTEEAQANMGRMNVNLQDTLGGMPIVKSYLLSGMLSRSYQVLLQLTAQKKLAVKKREAWVNPLLSTLMISPIIFAVSYGSYLIYKGQLGAGELIAFLYLLNLCLEPLEHIPELITRTFEMAGALRRVSEIVEQPTETENGRSLPKASAAPIEFQNVTFGYEESSPILRNVSFSVPEGKTIALVGASGGGKSTVFKLVCGFYPLPEDQGEIRVFGSLIHGADPEQLRSHFSVVTQDSYLFSGTIAENIGYGREGASMDEIIEAAKAAQAHSFIMQLEGGYQTYVGERGGFLSGGQRQRIAMARAFLKDAPVLLLDEPTSALDPESESAVQEALGVLMKQRTTMVIAHRLSTVQNADEIWVMEQGSIVEKGTHEQLLKMKGLYAQSYYQEFTESAERREVAYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBV6</accession>
    <name>E3EBV6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase</fullName>
            <ecNumber evidence="5">5.3.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">5-keto-4-deoxyuronate isomerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">DKI isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">kduI</name>
        <name evidence="6" type="ORF">PPSC2_24105</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the isomerization of 5-dehydro-4-deoxy-D-glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>5-dehydro-4-deoxy-D-glucuronate = 3-deoxy-D-glycero-2,5-hexodiulosonate</text>
            <dbReference type="Rhea" id="RHEA:23896"/>
            <dbReference type="ChEBI" id="CHEBI:17117"/>
            <dbReference type="ChEBI" id="CHEBI:29071"/>
            <dbReference type="EC" id="5.3.1.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="5">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 4/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the KduI family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.17" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373615.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11610"/>
    <dbReference type="EnsemblBacteria" id="ADO59080">
        <property type="protein sequence ID" value="ADO59080"/>
        <property type="gene ID" value="PPSC2_24105"/>
    </dbReference>
    <dbReference type="GeneID" id="66575249"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5103"/>
    <dbReference type="eggNOG" id="COG3717">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062609_0_0_9"/>
    <dbReference type="OMA" id="TFIWAMA"/>
    <dbReference type="OrthoDB" id="1047507at2"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00826"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008697">
        <property type="term" value="F:4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00687">
        <property type="entry name" value="KduI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007045">
        <property type="entry name" value="KduI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021120">
        <property type="entry name" value="KduI/IolB_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027449">
        <property type="entry name" value="KduI_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38461">
        <property type="entry name" value="PTHR38461"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04962">
        <property type="entry name" value="KduI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006625">
        <property type="entry name" value="KduI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="5">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="31408" checksum="82C643CA9F1B83E1" modified="2011-01-11" version="1">MEMRYSTHPEHAKHFTTEELRQHYLIQELFVPEEVKLVYTHEDRVIIGGIHPVNKSVALEGNDQIKAETFLERRELGVFNVGGSGTVKVDGETYELATKDCLYVGKGAKELIFESDSSEKPAKFYIVSALAHTTYPTTKQSFADVPSESLGSQETANNRTLRRFIHDEGIQSCQLVMGMTTLENGSVWNSMPTHVHDRRMEVYFYFELDENARMFHLMGEPNETRHLVMKNDEAVISPPWSIHCGAATGSYTFIWGMAGENKTYKDMDQVAMSELR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX8</accession>
    <name>E3EBX8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cellobiose 2-epimerase</fullName>
            <shortName evidence="3">CE</shortName>
            <ecNumber evidence="3">5.1.3.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rnbP</name>
        <name evidence="4" type="ORF">PPSC2_24205</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>D-cellobiose = beta-D-glucosyl-(1-&gt;4)-D-mannopyranose</text>
            <dbReference type="Rhea" id="RHEA:23384"/>
            <dbReference type="ChEBI" id="CHEBI:17057"/>
            <dbReference type="ChEBI" id="CHEBI:47931"/>
            <dbReference type="EC" id="5.1.3.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the cellobiose 2-epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.11" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373637.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EBX8"/>
    <dbReference type="STRING" id="1406.LK13_11730"/>
    <dbReference type="EnsemblBacteria" id="ADO59102">
        <property type="protein sequence ID" value="ADO59102"/>
        <property type="gene ID" value="PPSC2_24205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5125"/>
    <dbReference type="eggNOG" id="COG2942">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046651_3_0_9"/>
    <dbReference type="OMA" id="WVQAETF"/>
    <dbReference type="OrthoDB" id="783590at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047736">
        <property type="term" value="F:cellobiose epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00929">
        <property type="entry name" value="Cellobiose_2_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028584">
        <property type="entry name" value="Cellobiose_2_epim"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="391" mass="45204" checksum="CE4994419ED29796" modified="2011-01-11" version="1">METLVHEIRQEWKEHILPFWLGLKDEAHGGFYGEVDVDLHIHKQADKGGIATARLLWSFSAAARVTGERAYADAARHAFTFLQDHLLDPLHGGMYWMVNYTGQPVDTCKHVYAQAFAIYALAEYARATDDPNALPLAMELFHLVEQKGYDPALQAYGEQYDRSWNAQPNELLSENGVTAHITMNTHIHVLEAYTQLLRAYPNEEVRDALKNVLDILHHRVYDASARRLGVFFDREWRSLLDLTSYGHDIEASWLMEDAMNVLGYHPSEYVNMVVDIASAVAERAIQPDGSLINEREGERVDTSRIWWVQAEAMVGFYNAFQRTQDERFLHIVRNLWTYTRQYIIDPRAGGEWFWSVQADGRPDAREIAGPWKCPYHNSRFCIEMLERMEKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC39</accession>
    <name>E3EC39_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373909.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12950"/>
    <dbReference type="EnsemblBacteria" id="ADO59379">
        <property type="protein sequence ID" value="ADO59379"/>
        <property type="gene ID" value="PPSC2_25455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5394"/>
    <dbReference type="eggNOG" id="COG4481">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_180138_1_1_9"/>
    <dbReference type="OMA" id="RIKCLGC"/>
    <dbReference type="OrthoDB" id="2041238at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009296">
        <property type="entry name" value="DUF951"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38455">
        <property type="entry name" value="PTHR38455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06107">
        <property type="entry name" value="DUF951"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037263">
        <property type="entry name" value="DUF951_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8494" checksum="26BFE2DA5A6A16B9" modified="2011-01-11" version="1">MERKSFELGDIVQMKKPHPCGTNEMEIIRMGMDIRIKCVGCQHSVLIPRAKFEKNMKKVLRSKSSGDEQNSETI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECB6</accession>
    <name>E3ECB6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">araC5</name>
        <name evidence="3" type="ORF">PPSC2_01360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368901.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14080"/>
    <dbReference type="EnsemblBacteria" id="ADO54259">
        <property type="protein sequence ID" value="ADO54259"/>
        <property type="gene ID" value="PPSC2_01360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.269"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="PIEACTE"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="187"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="34626" checksum="AB0B5046D8B99F7D" modified="2011-01-11" version="1">MSKTDFLSFLVPPLPYFIEGNFTTYQKGDWHPNRYHLGYFDVIIIKEGLLHIGEEDESWKITENHALILEPDKHHFPIEACTEQTSFYWFHFQTNSMWCAQSSPNLIIPSTPIPELHFHSEHTTIHLPKYQKLINPHELFSKLDYLLASTLKTRKLALWETQQTFVNIFQSLEYDENYKSSSSKLAEQIEIFLKQNYRNAITNKDLEAHFHVHQNYLARCMKATFQRTPLEYLMDYRLDQGRSLLLQTDWSIQQITEETGFSQASYFSKCFKERFGMSPKNYRQQYWKPAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECK7</accession>
    <name>E3ECK7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GTP cyclohydrolase 1</fullName>
            <ecNumber evidence="5">3.5.4.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">GTP cyclohydrolase I</fullName>
            <shortName evidence="5">GTP-CH-I</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">folE</name>
        <name evidence="7" type="synonym">mtrA</name>
        <name evidence="7" type="ORF">PPSC2_03955</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>GTP + H2O = 7,8-dihydroneopterin 3'-triphosphate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17473"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:58462"/>
            <dbReference type="EC" id="3.5.4.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Cofactor biosynthesis; 7,8-dihydroneopterin triphosphate biosynthesis; 7,8-dihydroneopterin triphosphate from GTP: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homopolymer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the GTP cyclohydrolase I family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.16" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369415.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16760"/>
    <dbReference type="EnsemblBacteria" id="ADO54779">
        <property type="protein sequence ID" value="ADO54779"/>
        <property type="gene ID" value="PPSC2_03955"/>
    </dbReference>
    <dbReference type="GeneID" id="66574186"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.786"/>
    <dbReference type="eggNOG" id="COG0302">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049768_3_1_9"/>
    <dbReference type="OMA" id="CEHMCMS"/>
    <dbReference type="OrthoDB" id="1632367at2"/>
    <dbReference type="UniPathway" id="UPA00848">
        <property type="reaction ID" value="UER00151"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003934">
        <property type="term" value="F:GTP cyclohydrolase I activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035998">
        <property type="term" value="P:7,8-dihydroneopterin 3'-triphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.286.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00223">
        <property type="entry name" value="FolE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043133">
        <property type="entry name" value="GTP-CH-I_C/QueF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043134">
        <property type="entry name" value="GTP-CH-I_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001474">
        <property type="entry name" value="GTP_CycHdrlase_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018234">
        <property type="entry name" value="GTP_CycHdrlase_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020602">
        <property type="entry name" value="GTP_CycHdrlase_I_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11109">
        <property type="entry name" value="PTHR11109"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01227">
        <property type="entry name" value="GTP_cyclohydroI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00063">
        <property type="entry name" value="folE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00859">
        <property type="entry name" value="GTP_CYCLOHYDROL_1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="GTP_cyclohydroI" evidence="6">
        <location>
            <begin position="19"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="22066" checksum="4B00EF4E48365C30" modified="2011-01-11" version="1">MAGVKDYINRKAADNRDKIEYHVEQILKLIGEDPKREGLLETPARVARMYEEIFAGYEVDPRDALGVTFDENHEELVIVKDIVYYSQCEHHMAPFFGKVHIGYVPSGKIVGLSKLARLVEAVTRRLQVQERITSQIADILNEAVSAHGVMVVVEGEHLCMCARGVKKPGSKTVTSAVRGTFRDNAAQRAEFLSLIKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECN7</accession>
    <name>E3ECN7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-957</name>
        <name evidence="2" type="ORF">PPSC2_04095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54809.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16895"/>
    <dbReference type="EnsemblBacteria" id="ADO54809">
        <property type="protein sequence ID" value="ADO54809"/>
        <property type="gene ID" value="PPSC2_04095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.816"/>
    <dbReference type="eggNOG" id="COG3694">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071040_1_1_9"/>
    <dbReference type="OMA" id="WDFNERY"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010390">
        <property type="entry name" value="DUF990"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06182">
        <property type="entry name" value="ABC2_membrane_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="142"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="199"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="230"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54809.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="261" mass="29823" checksum="D9A61BDA11458F68" modified="2015-05-27" version="2">MYYLGLISEYLKNYMKSRLTYRADFWVEVISDLLFQATNLIFILVIFMHTNSLGGWSESEVVFVYGFFMVPYGLFSCFVNLWNFSERYIVKGELDRVMTRPAYNLFQIFLENVDPPALVGSVIGLIIMGISGAQMDLAMEWWFVPALIVLSLSAVAIYTGIYTILTSLSFFSDAPTGIIPLMYNIQGYGRYPVTIYNRAIQVVLTWILPFAFVGVYPASLFLQREDMRHMALLTPVMGIVFLTLGLLAWNWGIRRYRGAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECX5</accession>
    <name>E3ECX5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">Phosphoribosylformylglycinamidine cyclo-ligase</fullName>
            <ecNumber evidence="3 12">6.3.3.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 12">AIR synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 12">AIRS</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9 12">Phosphoribosyl-aminoimidazole synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 15" type="primary">purM</name>
        <name evidence="15" type="ORF">PPSC2_04255</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 12">
            <text>2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole + ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23032"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:137981"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.3.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 12">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 2/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the AIR synthase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.3.1" evidence="3 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369478.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17065"/>
    <dbReference type="EnsemblBacteria" id="ADO54844">
        <property type="protein sequence ID" value="ADO54844"/>
        <property type="gene ID" value="PPSC2_04255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.848"/>
    <dbReference type="eggNOG" id="COG0150">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047116_0_0_9"/>
    <dbReference type="OMA" id="EPLFMTD"/>
    <dbReference type="OrthoDB" id="923547at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00129"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004641">
        <property type="term" value="F:phosphoribosylformylglycinamidine cyclo-ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02196">
        <property type="entry name" value="PurM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00741">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
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        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004733">
        <property type="entry name" value="PurM_cligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10520">
        <property type="entry name" value="PTHR10520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00878">
        <property type="entry name" value="purM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 12 15" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRS" evidence="13">
        <location>
            <begin position="58"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="14">
        <location>
            <begin position="174"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00032931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00033093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO54844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="346" mass="36879" checksum="744EDC17799D7785" modified="2011-01-11" version="1">MSEAYKNAGVDIAAGNEAVERMKKHVKRTFRPEVLTDLGGFGALFGLNKDKYEEPVLVSGTDGVGTKLKLAFAMDRHDTIGIDAVAMCVNDIVVGGAEPLFFLDYLACDKVIPEKIEAIVAGIAEGCYQSGCALVGGETAEMPGMYSEGEYDIAGFTVGIVDKSKIINGSSIAPGDTVIGLASSGVHSNGFSLVRKLLLEQQGYDLHDEIEGLNGKLGDVLLEPTKIYVKSVLALLDKVKVKGMAHITGGGFIENIPRVLPDHVNVDIQYGTWPILPIFQLMQEKGEISNKDMFTTFNMGIGMVIVVGAEHAQTALEVMKEQGEAAYVIGKVTEGSSIVTFTGAEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED73</accession>
    <name>E3ED73_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Bcr/CflA family efflux transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">tcaB</name>
        <name evidence="10" type="ORF">PPSC2_02305</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 8">Cell membrane</location>
            <topology evidence="2 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the major facilitator superfamily. Bcr/CmlA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369070.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0446"/>
    <dbReference type="EnsemblBacteria" id="ADO54430">
        <property type="protein sequence ID" value="ADO54430"/>
        <property type="gene ID" value="PPSC2_02305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.439"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_47_0_9"/>
    <dbReference type="OMA" id="YFFMLNI"/>
    <dbReference type="OrthoDB" id="1452500at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004812">
        <property type="entry name" value="Efflux_drug-R_Bcr/CmlA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00710">
        <property type="entry name" value="efflux_Bcr_CflA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="88"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="146"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="226"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="262"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="292"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="318"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="355"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="381"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="19"/>
            <end position="405"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="409" mass="42405" checksum="493C5D1A911BBA39" modified="2011-01-11" version="1">MNRLSNTVMVAADMTKSRILWIAFVLGALSAFGPLSIDMYLPSLPTLADNLHTTTSLAQLSLTACLLGLAVGQIVAGPLSDVRGRRGPLVISLILYAAASLLCVFAPNIGVLIALRFIQGLTGSAGIVISRAVARDLYSGKELTRFFSLLMLVNGVAPIAAPVLGGVILNFVSWRGVFMVLCVVGVAMLIAVVLGLPETLPTNRRSSGGLKQTLGTLGHLFADRRFMGYALSQALITGAMFAYIAGSPFVLQDIFGVSPQTYSIIFAVNGLGIVLFSQLTGRLVGRFSERQLLLSGLVIAAVAGISLLTVAFTGGQLLAVLIPMFFVVSCVGIVSTTTTSLAMQSQQRSAGSASAMLGLLPLLLGSIASPLVGLGSGTTPVPMAVVIAIAELGALLSFIVLAKEARAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED83</accession>
    <name>E3ED83_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">M1-594</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-594</name>
        <name evidence="3" type="ORF">PPSC2_02355</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0045 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369080.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15120"/>
    <dbReference type="EnsemblBacteria" id="ADO54440">
        <property type="protein sequence ID" value="ADO54440"/>
        <property type="gene ID" value="PPSC2_02355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.449"/>
    <dbReference type="eggNOG" id="COG0011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137479_2_0_9"/>
    <dbReference type="OMA" id="YYVGPFE"/>
    <dbReference type="OrthoDB" id="2054097at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.930">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029756">
        <property type="entry name" value="MTH1187/YkoF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002767">
        <property type="entry name" value="Thiamine_BP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01910">
        <property type="entry name" value="Thiamine_BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89957">
        <property type="entry name" value="SSF89957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00106">
        <property type="entry name" value="TIGR00106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thiamine_BP" evidence="2">
        <location>
            <begin position="7"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="97" mass="10798" checksum="A86220779C000A7B" modified="2011-01-11" version="1">MANTLLSIQVIPKTPNNEDSYPYVDKAIEVIQRSGVKHQVNPLDTTMEGELDELLKVVKDMHEALTEAGSPSVISQIKIAHNPQGISMNKLTEKYRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED99</accession>
    <name>E3ED99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">lytT</name>
        <name evidence="8" type="ORF">PPSC2_02420</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AfsR/DnrI/RedD regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369096.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15185"/>
    <dbReference type="EnsemblBacteria" id="ADO54456">
        <property type="protein sequence ID" value="ADO54456"/>
        <property type="gene ID" value="PPSC2_02420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.466"/>
    <dbReference type="eggNOG" id="COG3947">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_14_3_9"/>
    <dbReference type="OMA" id="VKWRTSK"/>
    <dbReference type="OrthoDB" id="1958442at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005158">
        <property type="entry name" value="BTAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03704">
        <property type="entry name" value="BTAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01043">
        <property type="entry name" value="BTAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="6">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="43963" checksum="4E0C6883A6E22965" modified="2011-01-11" version="1">MKAILIDDERSALTYLERLLEADGRLTVMGKYTSAQAGLDHLAAERVDIVFIDIGMPEMNGLEAAEWIQQLDSHIHIVFVTAYSEYAIEAFELQALDYLLKPVHARRLNKTLDRIVATLADSRPSSSVVAAEQLPKVRCFQKLEIPEDGQGAVGAKPFKWRTLKSQELFSFLLHHEGEWVSKEQLLDALWPEYHLDKAVVHLHTSIYQIRKALKERMQDTKLEYNLDRYRLNRNGWVTDVELFERGISEWAASGNGGTPRIESLLALYRGNYLEEHDYPWAYAKREKLRNMYLACASELAKEELRSGRARQSIQRLLSLQQREPYSDDICGLLLTAYAQLGEYTAAQKHYESFVSLLEDELGIEPHQVTHQLYVQLKTQTLPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDB3</accession>
    <name>E3EDB3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-624</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-624</name>
        <name evidence="2" type="ORF">PPSC2_02490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369110.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15225"/>
    <dbReference type="EnsemblBacteria" id="ADO54470">
        <property type="protein sequence ID" value="ADO54470"/>
        <property type="gene ID" value="PPSC2_02490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.480"/>
    <dbReference type="eggNOG" id="COG0789">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1026161_0_0_9"/>
    <dbReference type="OMA" id="WMKERVE"/>
    <dbReference type="OrthoDB" id="1069857at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="185"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="31235" checksum="C1B84BE8E3BE246B" modified="2011-01-11" version="1">MEESKSTTEAAKQLGIGASTLRKYAAALEEQGYVFQRSANQSRMFSAGDVDCLKVMRRALREQHMTMEQSVQVVLERITAPFQLEDEEFRLPPISDAESLTATWQEIMAAAENREETVVQEQAAATVELTELEDEMSVQELSEEPMQPQEQLQTLTSAIEYRLEQAPVSVQTQESVEPQELAQMQDMVQTALSEMRSRLEELEAEHSRLVEKNVSLSNQLEDHKRWMKERVEEERDRQLITNLRTYQGRQRKTRSSLLSWLGLTPRSRREA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE4</accession>
    <name>E3EDE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Deoxyguanosine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">dgk</name>
        <name evidence="5" type="ORF">PPSC2_04610</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DCK/DGK family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54923.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599501.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17505"/>
    <dbReference type="EnsemblBacteria" id="ADO54923">
        <property type="protein sequence ID" value="ADO54923"/>
        <property type="gene ID" value="PPSC2_04610"/>
    </dbReference>
    <dbReference type="GeneID" id="66574048"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.926"/>
    <dbReference type="eggNOG" id="COG1428">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030466_2_0_9"/>
    <dbReference type="OrthoDB" id="1275854at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019136">
        <property type="term" value="F:deoxynucleoside kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01673">
        <property type="entry name" value="dNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002624">
        <property type="entry name" value="DCK/DGK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031314">
        <property type="entry name" value="DNK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01712">
        <property type="entry name" value="dNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000705">
        <property type="entry name" value="DNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="dNK" evidence="4">
        <location>
            <begin position="7"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="11"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="138"/>
            <end position="142"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000705-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000705-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54923.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="206" mass="24045" checksum="5D015B0ADA5DDA63" modified="2015-05-27" version="2">MKQAPFIAVEGPIGAGKTTLASMLSTELHLPMIKEIVEENPFLDKFYQNIDEWSFQLEMFFLCNRYKQLEDTGLQYIEKAQPVISDYHIYKNLIFAERTLKGVKLEKYRQIYHLLTDDMPKPDIIVYIRADLDTLLGRIRKRGRSFEQEMDPAYLEQLITDYDKGIQFLAEQSPAPRILTVNGNEIDFVENQAQFEQIVSDVKELI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDM2</accession>
    <name>E3EDM2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Pilus assembly protein TadB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tadB</name>
        <name evidence="8" type="ORF">PPSC2_06500</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369961.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19465"/>
    <dbReference type="EnsemblBacteria" id="ADO55330">
        <property type="protein sequence ID" value="ADO55330"/>
        <property type="gene ID" value="PPSC2_06500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1339"/>
    <dbReference type="eggNOG" id="COG4965">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079577_0_0_9"/>
    <dbReference type="OMA" id="RMQGIVM"/>
    <dbReference type="OrthoDB" id="1515313at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018076">
        <property type="entry name" value="T2SS_GspF_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00482">
        <property type="entry name" value="T2SSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="209"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="T2SSF" evidence="7">
        <location>
            <begin position="90"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="29279" checksum="A14F1BEAD3EAA6EB" modified="2011-01-11" version="1">MRTGKATAKQVSREVPSLPDYTVYTLSTAQKSMCILSSGVLFATIGYLFYHQWILSLLCAAGAVVMPRYFRKFLLQRRRSALSIQFKQALYSLSSSLSAGRSVENGFREAVEDLRLLSPDGDHDLIFEFNIITACLEIGQPVEAALQDLARRAQIEDITNFADVFAACKRTGGDLVEVVRRASSVIGEKLEIQQEIGVMIAQKRFESRVMFAAPFLFVLFMTVTAGDYMMPLYSGTGMILSTFCLLVLGGCLVWINHIMKIEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDN4</accession>
    <name>E3EDN4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pyrimidine/purine nucleoside phosphorylase</fullName>
            <ecNumber evidence="3">2.4.2.1</ecNumber>
            <ecNumber evidence="3">2.4.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Adenosine phosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Cytidine phosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Guanosine phosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Inosine phosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Thymidine phosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Uridine phosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Xanthosine phosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ppnP</name>
        <name evidence="4" type="ORF">PPSC2_06560</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a purine D-ribonucleoside + phosphate = a purine nucleobase + alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:19805"/>
            <dbReference type="ChEBI" id="CHEBI:26386"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>adenosine + phosphate = adenine + alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:27642"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>cytidine + phosphate = alpha-D-ribose 1-phosphate + cytosine</text>
            <dbReference type="Rhea" id="RHEA:52540"/>
            <dbReference type="ChEBI" id="CHEBI:16040"/>
            <dbReference type="ChEBI" id="CHEBI:17562"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>guanosine + phosphate = alpha-D-ribose 1-phosphate + guanine</text>
            <dbReference type="Rhea" id="RHEA:13233"/>
            <dbReference type="ChEBI" id="CHEBI:16235"/>
            <dbReference type="ChEBI" id="CHEBI:16750"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>inosine + phosphate = alpha-D-ribose 1-phosphate + hypoxanthine</text>
            <dbReference type="Rhea" id="RHEA:27646"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:17596"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>phosphate + thymidine = 2-deoxy-alpha-D-ribose 1-phosphate + thymine</text>
            <dbReference type="Rhea" id="RHEA:16037"/>
            <dbReference type="ChEBI" id="CHEBI:17748"/>
            <dbReference type="ChEBI" id="CHEBI:17821"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57259"/>
            <dbReference type="EC" id="2.4.2.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>phosphate + uridine = alpha-D-ribose 1-phosphate + uracil</text>
            <dbReference type="Rhea" id="RHEA:24388"/>
            <dbReference type="ChEBI" id="CHEBI:16704"/>
            <dbReference type="ChEBI" id="CHEBI:17568"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>phosphate + xanthosine = alpha-D-ribose 1-phosphate + xanthine</text>
            <dbReference type="Rhea" id="RHEA:27638"/>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
            <dbReference type="ChEBI" id="CHEBI:18107"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the nucleoside phosphorylase PpnP family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.1" evidence="3"/>
    <dbReference type="EC" id="2.4.2.2" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369973.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19525"/>
    <dbReference type="EnsemblBacteria" id="ADO55342">
        <property type="protein sequence ID" value="ADO55342"/>
        <property type="gene ID" value="PPSC2_06560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1351"/>
    <dbReference type="eggNOG" id="COG3123">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_157874_1_0_9"/>
    <dbReference type="OMA" id="YHYICHF"/>
    <dbReference type="OrthoDB" id="1937865at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047975">
        <property type="term" value="F:guanosine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004731">
        <property type="term" value="F:purine-nucleoside phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016154">
        <property type="term" value="F:pyrimidine-nucleoside phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009032">
        <property type="term" value="F:thymidine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004850">
        <property type="term" value="F:uridine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01537">
        <property type="entry name" value="Nucleos_phosphorylase_PpnP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009664">
        <property type="entry name" value="Ppnp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36540">
        <property type="entry name" value="PTHR36540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06865">
        <property type="entry name" value="Ppnp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="104" mass="11489" checksum="24D8BA1E1DEED4B5" modified="2011-01-11" version="1">MTQFDGVSVIKKANVYYDGQVTSRTVILGDGSKVTLGIMLPGTYEFGTDSREIMEILAGDLRVLLPGTEEWLEIQGTSTFHVPAKSSFKLEVRSVTDYCCSYPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDY5</accession>
    <name>E3EDY5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">33 kDa chaperonin</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Heat shock protein 33 homolog</fullName>
            <shortName evidence="6">HSP33</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">hslO</name>
        <name evidence="7" type="ORF">PPSC2_00310</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="6">Under oxidizing conditions two disulfide bonds are formed involving the reactive cysteines. Under reducing conditions zinc is bound to the reactive cysteines and the protein is inactive.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the HSP33 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368698.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13325"/>
    <dbReference type="EnsemblBacteria" id="ADO54051">
        <property type="protein sequence ID" value="ADO54051"/>
        <property type="gene ID" value="PPSC2_00310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.61"/>
    <dbReference type="eggNOG" id="COG1281">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054493_1_0_9"/>
    <dbReference type="OMA" id="DMQCECC"/>
    <dbReference type="OrthoDB" id="1406579at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00498">
        <property type="entry name" value="Hsp33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.30.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00117">
        <property type="entry name" value="HslO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000397">
        <property type="entry name" value="Heat_shock_Hsp33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016154">
        <property type="entry name" value="Heat_shock_Hsp33_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016153">
        <property type="entry name" value="Heat_shock_Hsp33_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30111">
        <property type="entry name" value="PTHR30111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01430">
        <property type="entry name" value="HSP33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005261">
        <property type="entry name" value="Heat_shock_Hsp33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118352">
        <property type="entry name" value="SSF118352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64397">
        <property type="entry name" value="SSF64397"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5 6" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0346">Stress response</keyword>
    <keyword evidence="2 6" id="KW-0862">Zinc</keyword>
    <feature type="disulfide bond" description="Redox-active" evidence="6">
        <location>
            <begin position="238"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="6">
        <location>
            <begin position="271"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="32206" checksum="3CDBDAB47D60A745" modified="2011-01-11" version="1">MENKQDRLIRGTAMDGRVRAFAVRTTQLVEELRRRHDTYPTATAALGRTLTAGAIMGSMLKGKERLTIQVKGEGPIGQIVVDANAVGEVRGYVTEPHVHLPSNSMGKLDVAGAVGTEGFIHIIKDLGLKEPYRGSIPIISGELGEDFTYYFAKSEQTPSAVGLGVLVDTDNSVIVAGGFIIQLLPGLNDDEITAIENAVGSIPPVTALLDQGLELDEMLRWMLPDVRVLDEMDIHFQCECSRERVEKTLISLGESELKQLIEEEGQAEVVCHFCNEAYQFNKDELQNLLDQAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE22</accession>
    <name>E3EE22_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ykvO</name>
        <name evidence="1" type="ORF">PPSC2_02725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369142.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0518"/>
    <dbReference type="EnsemblBacteria" id="ADO54502">
        <property type="protein sequence ID" value="ADO54502"/>
        <property type="gene ID" value="PPSC2_02725"/>
    </dbReference>
    <dbReference type="GeneID" id="66574430"/>
    <dbReference type="KEGG" id="ppm:PPSC2_02725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.511"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_0_9"/>
    <dbReference type="OMA" id="LTTHIAC"/>
    <dbReference type="OrthoDB" id="1356861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="26671" checksum="CAF3F5D103B21E54" modified="2011-01-11" version="1">MGKFDGKVAVVTGGTSGIGLASAQQFVKEGAYVFITGRRQRELDEAVKQIGKNVTGVRGDISKSEDLDILFETVKREKGHLDILFANAGLGSFLPLGEITEAQYYKTFDVNVKGTIFTVQKALALFPNKRGSIILTGSTAGSTGMPAFSIYGASKAAIRQLVRSWILDMRGTEIRINILSPGTIVTPAYDELFGSELDHLLEQAKNDIPLGRVGQVEEISNAVMFLASNESSYMNGVELFVDGGVAQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB7</accession>
    <name>E3EEB7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_05175</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369673.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1058"/>
    <dbReference type="EnsemblBacteria" id="ADO55040">
        <property type="protein sequence ID" value="ADO55040"/>
        <property type="gene ID" value="PPSC2_05175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1048"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_12_1_9"/>
    <dbReference type="OMA" id="HYEAYDS"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="214" mass="25142" checksum="6816F9FFC3CA0CAC" modified="2011-01-11" version="1">MTENWHQNLKNKNREELIAAAKELFMKQSFLKVNIKDVCHVAGVSRVTFYKHFQSMNELIFEVQMEILESMTEFVRRAPSAEMNGKQMLTSMLDAWIDYAWQHPDYIKFILLFDLHYEAYDSNQELKEQYKNFVSREKEQHFLIDALEAGIQDGSLKSDAEPLKTAHFIFTSMMGLLQKMSLTSKEDWNSEFQDVQIANRFVGMLVQYLSPESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEC5</accession>
    <name>E3EEC5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Glucanase</fullName>
            <ecNumber evidence="7">3.2.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">guxA</name>
        <name evidence="11" type="ORF">PPSC2_05215</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the glycosyl hydrolase family 6.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.-" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369681.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EEC5"/>
    <dbReference type="STRING" id="1406.LK13_18135"/>
    <dbReference type="CAZy" id="CBM3">
        <property type="family name" value="Carbohydrate-Binding Module Family 3"/>
    </dbReference>
    <dbReference type="CAZy" id="GH6">
        <property type="family name" value="Glycoside Hydrolase Family 6"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55048">
        <property type="protein sequence ID" value="ADO55048"/>
        <property type="gene ID" value="PPSC2_05215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1056"/>
    <dbReference type="eggNOG" id="COG3693">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5297">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015488_3_0_9"/>
    <dbReference type="OMA" id="YEWNPNF"/>
    <dbReference type="OrthoDB" id="1331351at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030248">
        <property type="term" value="F:cellulose binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00063">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016288">
        <property type="entry name" value="Beta_cellobiohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036434">
        <property type="entry name" value="Beta_cellobiohydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008965">
        <property type="entry name" value="CBM2/CBM3_carb-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001956">
        <property type="entry name" value="CBM3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036966">
        <property type="entry name" value="CBM3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003961">
        <property type="entry name" value="FN3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036116">
        <property type="entry name" value="FN3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001524">
        <property type="entry name" value="Glyco_hydro_6_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34876">
        <property type="entry name" value="PTHR34876"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00942">
        <property type="entry name" value="CBM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01341">
        <property type="entry name" value="Glyco_hydro_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00733">
        <property type="entry name" value="GLHYDRLASE6"/>
    </dbReference>
    <dbReference type="SMART" id="SM01067">
        <property type="entry name" value="CBM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00060">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49265">
        <property type="entry name" value="SSF49265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49384">
        <property type="entry name" value="SSF49384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51989">
        <property type="entry name" value="SSF51989"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51172">
        <property type="entry name" value="CBM3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50853">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00656">
        <property type="entry name" value="GLYCOSYL_HYDROL_F6_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2 7" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="4 7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1 7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005127779" description="Glucanase" evidence="7">
        <location>
            <begin position="40"/>
            <end position="717"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="9">
        <location>
            <begin position="474"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="domain" description="CBM3" evidence="10">
        <location>
            <begin position="574"/>
            <end position="717"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="349"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="550"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="550"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="6">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="717" mass="77018" checksum="204898370E73EE45" modified="2011-01-11" version="1">MKQLKTKQVLRKGMKYAFALSLVASSFLPGAGFTDKIHAESHVDNPYQGATKYVNPDYAASVDTSIAKVTDANLKAKMQTVKTFPTAVWLDRIAAINGGGGKLGLEAHLDQVLAQKKGNTPITAEFIVYDLPGRDCHALASNGELPLTQAGLETYKKDYIDKIASIFANPKYKDIRIVAIIEPDSLPNLVTNLDTPQCGQAKSTGIYEAGVKYTMNKLNEIPNVYKYVDIGHSGWLGWDNNRAATVSLFTTIFKDTSKGLASVDGFITNTANTSPLTEPNLPDPNLNIGGQPIKSSKFYEWNPNFDESDFAESLHRDFVNAGWPSSLGMLIDTGRNGWGGPNRPTSAVGNDINSYVNSGRVDKRSHRGNWCNSSGAGMGTPPQTAPAGHIDAYVWAKPPGDSDGSSSLIPNDEGKGFDRMCDPTYTTKDGTLTDALPNAPISGAWFHDQFVMLVQNAYPAIVPSSGGVDPAPTAPAVPSGLKATVGNAQVTLTWDASTGADSYTVKRATSEAGPFTAVAPLVTAREYTDKGLTNGTTYFYVVSATNAKGTSKDSATVSAEPKGTPTDPTDPTDPAGDLVVMYRAGDTDPANNAAKPFFNLKNKGTTPVKLSELKIRYYFTKDGSQELQSAVDWAQVGNDNVLRTIKDNYIEIGFSAAAGTLAAGAQTGDIQIRMNNSDWSNLNESNDYSFDPTKTSYAEWNKVTLFHNDKLVWGIEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEE8</accession>
    <name>E3EEE8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370030.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1420"/>
    <dbReference type="EnsemblBacteria" id="ADO55399">
        <property type="protein sequence ID" value="ADO55399"/>
        <property type="gene ID" value="PPSC2_06825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1406"/>
    <dbReference type="eggNOG" id="ENOG5033NQJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1184123_0_0_9"/>
    <dbReference type="OMA" id="YVQERAC"/>
    <dbReference type="OrthoDB" id="1643100at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="256" mass="29497" checksum="82554D7D87CEC45C" modified="2011-01-11" version="1">MSLREVFERLAIYLPDDTLEALLIHSKKQKGHKVQLRLLSEQELAESTEWMAQIEVFKHIVPLWTDDHSNYVGLYVEGPLAYKLCYINHEETDLSPIYRSAASLIAELEQKPELDWEELHKDYPSNENISTEQLAEDIRCMHELQAILEKDSSMEDDVRCQLLYSLMAITPVSEVDSLLSYVDDEDMYVQERACILLGYHGYEPATEILKEVVKHGSPNGKLAARKALSMIRTKQMDKHIKNKPTSHIVNIDGIER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEJ2</accession>
    <name>E3EEJ2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 6">50S ribosomal protein L20</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rplT</name>
        <name evidence="7" type="ORF">PPSC2_07035</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the bacterial ribosomal protein bL20 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429517.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20015"/>
    <dbReference type="EnsemblBacteria" id="ADO55443">
        <property type="protein sequence ID" value="ADO55443"/>
        <property type="gene ID" value="PPSC2_07035"/>
    </dbReference>
    <dbReference type="GeneID" id="66573529"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1451"/>
    <dbReference type="eggNOG" id="COG0292">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_123265_0_1_9"/>
    <dbReference type="OMA" id="GRRKNVW"/>
    <dbReference type="OrthoDB" id="1932144at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07026">
        <property type="entry name" value="Ribosomal_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1900.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00382">
        <property type="entry name" value="Ribosomal_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005813">
        <property type="entry name" value="Ribosomal_L20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035566">
        <property type="entry name" value="Ribosomal_protein_L20_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10986">
        <property type="entry name" value="PTHR10986"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00453">
        <property type="entry name" value="Ribosomal_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00062">
        <property type="entry name" value="RIBOSOMALL20"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74731">
        <property type="entry name" value="SSF74731"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01032">
        <property type="entry name" value="rplT_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00937">
        <property type="entry name" value="RIBOSOMAL_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="119" mass="13583" checksum="ECCE834D00F1A230" modified="2011-01-11" version="1">MARVKGGFVVRRRHKKVLKLAKGYFGSKHRIFKTANEQVMKSLVYAYRDRRQTKRNFRRLWIVRINAAARLNGLSYSKLMHGLKLAGVDINRKILADLAVNDINAFNSLATVAKGKINA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEK4</accession>
    <name>E3EEK4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">3-isopropylmalate dehydrogenase</fullName>
            <ecNumber evidence="14">1.1.1.85</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">3-IPM-DH</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="14">Beta-IPM dehydrogenase</fullName>
            <shortName evidence="14">IMDH</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14 17" type="primary">leuB</name>
        <name evidence="17" type="ORF">PPSC2_07090</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14 15">Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 14 15">
            <text>(2R,3S)-3-isopropylmalate + NAD(+) = 4-methyl-2-oxopentanoate + CO2 + NADH</text>
            <dbReference type="Rhea" id="RHEA:32271"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17865"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.85"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14 15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="14 15">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="14 15">Binds 1 Mg(2+) or Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 14 15">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 14 15">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="14">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 14">Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.85" evidence="14"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370082.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20070"/>
    <dbReference type="EnsemblBacteria" id="ADO55455">
        <property type="protein sequence ID" value="ADO55455"/>
        <property type="gene ID" value="PPSC2_07090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1463"/>
    <dbReference type="eggNOG" id="COG0473">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
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        <property type="reaction ID" value="UER00072"/>
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        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="term" value="F:3-isopropylmalate dehydrogenase activity"/>
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    <keyword evidence="7 14" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="13 14 15" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
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    <keyword evidence="9 14" id="KW-0460">Magnesium</keyword>
    <keyword evidence="12 14" id="KW-0464">Manganese</keyword>
    <keyword evidence="8 14 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 14 15" id="KW-0520">NAD</keyword>
    <keyword evidence="10 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Iso_dh" evidence="16">
        <location>
            <begin position="6"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="78"/>
            <end position="91"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
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        <location>
            <position position="98"/>
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        </location>
    </feature>
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        </location>
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            <dbReference type="ARBA" id="ARBA00023304"/>
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            <dbReference type="RuleBase" id="RU004445"/>
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            <dbReference type="Proteomes" id="UP000006868"/>
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    <sequence length="358" mass="38547" checksum="B9C30048C5CB21FD" modified="2011-01-11" version="1">MADVKKIAVIAGDGIGPEVVAEAEKILKRTEEVFGLSFETEHALFGGIAIDKKGTPLPQETLAVCQSADAVLLGAVGGPQWDNNPKELRPETGLLGIRKELGLFSNLRPAVVFDCLKDASTLKPEVLEGTDLIVVRELTGGIYFGEKYRRESAQGEEAVDTCAYNVTEVERIVRQSFEIAQKRRKKLASVDKANVLETSRLWREVVNRVAVDYPDVELEHVLVDNCAMQLLRRPSSFDVIVTENMFGDILSDEAAMLTGSIGMLSSASLGEGSFGLYEPVHGSAPDIAGQGLANPIATILSVALMFRLTFGYEKAADAIEKAVAEVLDAGHRTADIAVDKSQAISTTEMGDLIAAAIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF55</accession>
    <name>E3EF55_PAEPS</name>
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            <fullName evidence="7">Histidine kinase</fullName>
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    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
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        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
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        <property type="entry name" value="His_kinase"/>
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    </dbReference>
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    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
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            <end position="317"/>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="593" mass="67316" checksum="33BAFDA11D9F5D99" modified="2011-01-11" version="1">MFFIRMMNDMKLRKKMTLTFISVAVLPLLLCGLFLTGKLREAVIKDAFMQASNNVERVQNRTEELIKVPLDISYRLTNDNRMKMVASQKYDSYIEVIQAYREYTGIRDYLQLYKEISGIRVYVPNPGALNNWEFIQPDDRIITADWYKEAIAQKGLAGWNLIKDERYNADYLSLIRSFSVNSPGRKGVLVINVNQRQLNSILNQESFPTLIVDSRNQIVASNEAELFGKNLSEIHADENILFQQEGSYNTLINGKASKVVIANLTPQNSWNGLRIISVFSVSEITRDANQVIWLGGVVITASLIFAALLIYASASLLSRRLLRLSKHMTQVGAGSWETYLHIDGKDEVGLLSREFNALVSNVNHLVQEVQETNRQKNLVEQRQNEIKFKMLASQINPHFLFNSLESIRMEAHIRQQDDIAKAVWQLSALLRSSLEAGNDKIPLRKELEQVCCYLDLQKFRYEDRLEYRLMVDPDLEETLVPPLIIQPLVENSIVHGLDNQAEGAVIEVKVKKIPEGVRVMVCDNGAGFTDDRLVLVQAELAASVHEQEVQRIGLRNVNDRLVLLYGTSSALHIESEPGKGTCIQFFIPGGETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF88</accession>
    <name>E3EF88_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Multidrug ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">M1-758</name>
        <name evidence="5" type="ORF">PPSC2_03205</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16015"/>
    <dbReference type="EnsemblBacteria" id="ADO54608">
        <property type="protein sequence ID" value="ADO54608"/>
        <property type="gene ID" value="PPSC2_03205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.614"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="LDPFAWK"/>
    <dbReference type="OrthoDB" id="1179151at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="15"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="49"/>
            <end position="56"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="321" mass="36199" checksum="B51A07E85BD2384D" modified="2011-01-11" version="1">MNNHVEVPTQIQRKAPIIEMSQVYKTRGNRNIGPINLTVEPGYVVALAGHNGSGKSTLIHLLTQLVHPDSGEIRWFGQAYPDGMPADTRQWVGYIPEQPVREEDRLTAEAAAAFRALWYPGWDETRFQRLMDRFQVPSHTKLSRMSKGQRRKFELAAALAPHPRVLLLDEPSSGLDPFAWKIMLDELRDCMKNGKTTIIIATHIMDEIKRLADYIVLMHDGRLLGKLEKDHLLENGKEMWFEGTPEEASELPGVVETESDGNLQRIITLAAGEASAILEQAGIRPIRVRRLELDDILVYWSAGQISANAETFMEKEGVKQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFC1</accession>
    <name>E3EFC1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YrhO3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yrhO3</name>
        <name evidence="3" type="ORF">PPSC2_05360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369717.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18275"/>
    <dbReference type="EnsemblBacteria" id="ADO55084">
        <property type="protein sequence ID" value="ADO55084"/>
        <property type="gene ID" value="PPSC2_05360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1087"/>
    <dbReference type="eggNOG" id="COG1378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072493_1_1_9"/>
    <dbReference type="OMA" id="RENIWNI"/>
    <dbReference type="OrthoDB" id="1036370at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021586">
        <property type="entry name" value="Tscrpt_reg_TrmB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002831">
        <property type="entry name" value="Tscrpt_reg_TrmB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11495">
        <property type="entry name" value="Regulator_TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01978">
        <property type="entry name" value="TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TrmB" evidence="1">
        <location>
            <begin position="11"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Regulator_TrmB" evidence="2">
        <location>
            <begin position="112"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="286" mass="32503" checksum="C095DC5A7D341BBB" modified="2011-01-11" version="1">MKSKPNILEILRDLNFSEYEAKAYVTLLESSPLSGYAVSLNSGVPRSKIYEVLSGMVNRGDIMVSQENTPLYVPLPPHELIAQRKRKAEQIFNVAQESLEQYTASFQNRENIWNISGYEAIINRINEGVKGAKHRILLEIWKEDAEVFRDALEQAAQQGIEVILVAYGDLNFDFATVYRHDMSEEITSEIGGRWIVLSVDDREVVAGILSLGDDSRAAWTLHPGLVMPITEVIIHDIYIMEILYEFREELEAKFGPNLIHLRNKFAMGPNGKGYYVPLTEKSIKRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG08</accession>
    <name>E3EG08_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">FhlB domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ylqH</name>
        <name evidence="1" type="ORF">PPSC2_09765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370655.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22230"/>
    <dbReference type="EnsemblBacteria" id="ADO56041">
        <property type="protein sequence ID" value="ADO56041"/>
        <property type="gene ID" value="PPSC2_09765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2057"/>
    <dbReference type="eggNOG" id="COG2257">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041013_4_2_9"/>
    <dbReference type="OMA" id="HEVPIYE"/>
    <dbReference type="OrthoDB" id="1823885at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1690.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006135">
        <property type="entry name" value="T3SS_substrate_exporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029025">
        <property type="entry name" value="T3SS_substrate_exporter_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30531">
        <property type="entry name" value="PTHR30531"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01312">
        <property type="entry name" value="Bac_export_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00950">
        <property type="entry name" value="TYPE3IMSPROT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160544">
        <property type="entry name" value="SSF160544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="10922" checksum="0A8097A9717CAB93" modified="2011-01-11" version="1">MKEPLESPSPSMKKAVALKYTPGESEAPIVVAKGSGRIADSILEKAKEHGVPVQEDAALVEVLSKLDLDEQIPAELYQLVAEVLTYIYQMDRLAPRDDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG14</accession>
    <name>E3EG14_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fis family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">comM</name>
        <name evidence="3" type="ORF">PPSC2_09790</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Mg-chelatase subunits D/I family. ComM subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370661.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22260"/>
    <dbReference type="EnsemblBacteria" id="ADO56047">
        <property type="protein sequence ID" value="ADO56047"/>
        <property type="gene ID" value="PPSC2_09790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2064"/>
    <dbReference type="eggNOG" id="COG0606">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026145_1_1_9"/>
    <dbReference type="OMA" id="FNGAATY"/>
    <dbReference type="OrthoDB" id="581802at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045006">
        <property type="entry name" value="CHLI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004482">
        <property type="entry name" value="Mg_chelat-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025158">
        <property type="entry name" value="Mg_chelat-rel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000523">
        <property type="entry name" value="Mg_chelatse_chII-like_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039">
        <property type="entry name" value="PTHR32039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039:SF7">
        <property type="entry name" value="PTHR32039:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01078">
        <property type="entry name" value="Mg_chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13335">
        <property type="entry name" value="Mg_chelatase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00368">
        <property type="entry name" value="TIGR00368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="237"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="539" mass="59511" checksum="252C3B6A3DBD0023" modified="2011-01-11" version="1">MYGKLHGACLYGIDGVLIEVETDLSNGLPQTAIIGLPDSAIREAVERVRAAIKNCGFKYPSQRVTINLAPADLRKEGSSFDLAIALGLLTTSGQVVLPVGERTLFIGELALDGSIRPVNGVLSMVDLAKREGFDSVLLPQENASEARLIADIRIYAIRHLVDLIPVNDHAQATPDGQVTNQNCTASEQVIIHSYDHLPRAEHIPLCEQEALISNMEDYSDVLGQLHAKRALVIAAAGMHNILLMGPPGAGKTMLIRRLPSILPPLTEKESLEVTKVYSAAGKWKDSSPHLMHVRPFRAPHHTISAAGLVGGGGIPKPGEISLAHRGILFLDELPEFSRHVLEVLRQPLEDHHVTISRSRAVFKYPAHFLLAASLNPCHCGFFGNNTEHQRCTCSPAAVARYRSRISGPLLDRIDLQLEVSQPKDWREEKESLSSADMRKQVLAARVIQIRRYSKLPFSWNSELSGQMLRKYAVLEQNAAELLDQTMDALGLSMRAYDRILKLSRTIADLQESEKITTSHVAEAIQYRQMDRANSNFPEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG33</accession>
    <name>E3EG33_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Flagellar hook-length control protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fliK</name>
        <name evidence="4" type="ORF">PPSC2_09885</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370679.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22355"/>
    <dbReference type="EnsemblBacteria" id="ADO56066">
        <property type="protein sequence ID" value="ADO56066"/>
        <property type="gene ID" value="PPSC2_09885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2083"/>
    <dbReference type="eggNOG" id="COG3144">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_575982_0_0_9"/>
    <dbReference type="OMA" id="QFAKEMT"/>
    <dbReference type="OrthoDB" id="1796543at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021136">
        <property type="entry name" value="Flagellar_hook_control-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038610">
        <property type="entry name" value="FliK-like_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02120">
        <property type="entry name" value="Flg_hook"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169201" evidence="2">
        <location>
            <begin position="22"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_hook" evidence="3">
        <location>
            <begin position="345"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="235"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="420"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="420"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="441"/>
            <end position="470"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="484" mass="50953" checksum="0CF550931D845AD8" modified="2011-01-11" version="1">MTLISQSVSLSSSQTANSTTASTTSTATAAGATTGAFNQTLTQMMTGGQTDSAGTDANGSPLVMVLPLIASGESAEAPTEPLVETLAPLLQNLEKLDDQVVADPALLATLQSWIQQVQQFLQGNGTNQQADGGETAETTGLTALAANPATLRFALQDALSQLANVAEQASGDQKTKVTQLLQSLQSATAGTGAISDEQWHGVLKAVELADSGDSQAAQPSAQRANGAQTLTAASTNKQVTPQQQASQGETSQQGSEGQRSSTNLLVQSAVKPTVTDEAGTFVDAAEQADPASTDNQTPVITTAGQLSVQAQGTTPSAPAQPVVHVRQFAKEMTEFVVQKLDIVKHTGLTEATIMLRPDHLGQLEVKLTMQNGHLVAQFMTEHSGAKDLLEQQMSQLRTSLQSQGIQVDKVEVTHNESLSSHMYQDGRGSGANQQQQSNQRSKARGREESEDAVKVAEMTEELRNWTVEQRADDMNRTGSFTAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG44</accession>
    <name>E3EG44_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Flagellar biosynthetic protein FliQ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">fliQ</name>
        <name evidence="10" type="ORF">PPSC2_09940</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Role in flagellar biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the FliQ/MopD/SpaQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430038.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22410"/>
    <dbReference type="EnsemblBacteria" id="ADO56077">
        <property type="protein sequence ID" value="ADO56077"/>
        <property type="gene ID" value="PPSC2_09940"/>
    </dbReference>
    <dbReference type="GeneID" id="66577927"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2094"/>
    <dbReference type="eggNOG" id="COG1987">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_164516_2_1_9"/>
    <dbReference type="OMA" id="TMPWMLN"/>
    <dbReference type="OrthoDB" id="1939288at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002191">
        <property type="entry name" value="Bac_export_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006305">
        <property type="entry name" value="FliQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006306">
        <property type="entry name" value="T3SS_HrpO"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34040">
        <property type="entry name" value="PTHR34040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01313">
        <property type="entry name" value="Bac_export_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004669">
        <property type="entry name" value="FliQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00952">
        <property type="entry name" value="TYPE3IMQPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01402">
        <property type="entry name" value="fliQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01403">
        <property type="entry name" value="fliQ_rel_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0966">Cell projection</keyword>
    <keyword evidence="10" id="KW-0969">Cilium</keyword>
    <keyword evidence="10" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="89" mass="9788" checksum="45347EA90CCB308F" modified="2011-01-11" version="1">MTSEFIISLAGQAVYIVLKVSAPMLILGLVVGLIISIFQATTQIQEQTLAFVPKIVAVLLALLLFGPWILTTLVDFTYNILDNLYKYIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG94</accession>
    <name>E3EG94_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">30S ribosomal protein S14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rpsN</name>
        <name evidence="7" type="synonym">rpsN1</name>
        <name evidence="7" type="ORF">PPSC2_12270</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the universal ribosomal protein uS14 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371188.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2614"/>
    <dbReference type="EnsemblBacteria" id="ADO56584">
        <property type="protein sequence ID" value="ADO56584"/>
        <property type="gene ID" value="PPSC2_12270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2600"/>
    <dbReference type="eggNOG" id="COG0199">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_139869_0_0_9"/>
    <dbReference type="OMA" id="RLNNRCR"/>
    <dbReference type="OrthoDB" id="2032609at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.830.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00537">
        <property type="entry name" value="Ribosomal_S14_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001209">
        <property type="entry name" value="Ribosomal_S14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043140">
        <property type="entry name" value="Ribosomal_S14/S29"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023036">
        <property type="entry name" value="Ribosomal_S14_bac/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018271">
        <property type="entry name" value="Ribosomal_S14_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19836">
        <property type="entry name" value="PTHR19836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00253">
        <property type="entry name" value="Ribosomal_S14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00527">
        <property type="entry name" value="RIBOSOMAL_S14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="89" mass="10472" checksum="28700B86CBF87AE3" modified="2011-01-11" version="1">MAKKSKVVREKKRQETVAKYAELRRQLKERGDYEALQKLPRNASPTRLKNRCELTGRSRGYLRKFKVSRIVFRELAHKGQIPGVTKSSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGF3</accession>
    <name>E3EGF3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SsrA-binding protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Small protein B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">smpB</name>
        <name evidence="5" type="ORF">PPSC2_00985</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="3">The tmRNA-SmpB complex associates with stalled 70S ribosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SmpB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007428162.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13975"/>
    <dbReference type="EnsemblBacteria" id="ADO54181">
        <property type="protein sequence ID" value="ADO54181"/>
        <property type="gene ID" value="PPSC2_00985"/>
    </dbReference>
    <dbReference type="GeneID" id="66574767"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.185"/>
    <dbReference type="eggNOG" id="COG0691">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108953_3_0_9"/>
    <dbReference type="OMA" id="WTNHSAR"/>
    <dbReference type="OrthoDB" id="1720952at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070929">
        <property type="term" value="P:trans-translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd09294">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00023">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023620">
        <property type="entry name" value="SmpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000037">
        <property type="entry name" value="SsrA-bd_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020081">
        <property type="entry name" value="SsrA-bd_prot_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30308">
        <property type="entry name" value="PTHR30308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01668">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74982">
        <property type="entry name" value="SSF74982"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00086">
        <property type="entry name" value="smpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01317">
        <property type="entry name" value="SSRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="132"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="18170" checksum="EABC87A54019E0A9" modified="2011-01-11" version="1">MGKKADGKVLAQNKKASHDYFIEDTYEAGMVLTGTEIKSLRNGRSNISDAFATIRNGEIHIHNMHISPFEQGNRNNPTDPTRTRKLLLHKEQIRKLIGLSKQEGYTIVPLKIYVRNGYAKLLLGLGRGKKQYDKRETAAKRDAQRDIQRALREKQKIAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGG9</accession>
    <name>E3EGG9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-348</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-348</name>
        <name evidence="1" type="ORF">PPSC2_01070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368840.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0210"/>
    <dbReference type="EnsemblBacteria" id="ADO54197">
        <property type="protein sequence ID" value="ADO54197"/>
        <property type="gene ID" value="PPSC2_01070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.202"/>
    <dbReference type="eggNOG" id="ENOG50306NS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1093468_0_0_9"/>
    <dbReference type="OrthoDB" id="2115630at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="29890" checksum="B8957152CDA874C7" modified="2011-01-11" version="1">MLFQMCYGPEIESIYETIREQSGIKINTLREYYQYTEEGDITSLIEGVITILLDLHFIRKEEGVLFAVEDKEWSNKEVFKRLSKISLSQNEDEESLNYIFSSLYNQVFVKQDKMFETNIHYHVNKNFTKTMIGHEKINAWKRMMESWGLGRRVYTGFYALPHISLLQEIVEEVGEWEGALHLFCEEKIHPVLPCITSEGMIFRGAIFGLMGLQHKSLEISYKQDLPFKSYGPNQEWNWIQLKKKQGDNDDTMSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGR9</accession>
    <name>E3EGR9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369785.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1173"/>
    <dbReference type="EnsemblBacteria" id="ADO55153">
        <property type="protein sequence ID" value="ADO55153"/>
        <property type="gene ID" value="PPSC2_05690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1159"/>
    <dbReference type="eggNOG" id="COG5301">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_328115_0_0_9"/>
    <dbReference type="OMA" id="NPYAIRY"/>
    <dbReference type="OrthoDB" id="568124at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="851" mass="92693" checksum="C67E1663AE627C0A" modified="2011-01-11" version="1">MASEKTPNLGLNQIDRTSPKTTYFDLEKYLDQNWRSVDEFAGEVNDGVNEIKKRLDTTERKAVTLEPGVQIVHAEKAAPFSLTGLSGRTLVNLLGRWGNLSSLMGVTPYQADIALDNLNKGTMPNSLKVTIKPGYTVGVGFYSNFKFLSGKYYVAIVRAKVGNATDAGISAPNALVESKVIVKDKTKFATAWFRLAPTSDIITNIDLVTQGTVGQYSYFEAARIYEISAAEYTALATMTDEQIDTKYPYVDSVMPVRNPYAIRYGENLIPPFYEWTLGERAKVINPYKLETVATVSVDQSNVYVPVVPGTTYTLTVKVNGRVTVVETDDTGLETTVYSTTDNENRIVTVTFTTKTTTKRVRIYATNTGAGTYTLENPMLNIGSMAKPFKPCEHSMLALQTDLYADPVTGGNADTVFEQDGQYFKAKKWKGITLDGSRAWVLGDAAATAGVRQVKVVALAAGAVAASGTGTKFDGKVLPQGSTGNTADTNAVTAAGDIYIGVSMADSGWADSYSPAQDDIKAYFYGWKVYDAGTFTPTQAQAATTATWNGTGAKYYVPRVGSANPVASVPVTSYAGYTPYQLVYQLATPTVEPVASEGQLSFVEGDNQVEVGTGIVLREVVKLDDRDPVSVYINSINSGTRFQYPSGKILSIYKNGAEDFSWYKGTYVYSGEFYAYGQIARSNFDQTSTYSATYLMLDKPPVVSFIGSYAANEKTLLLDLIDNIRQNTARVSVLESKKADKDSPAWITPTLLSGATPETDANKPQYTKMSDGMVLFRGAIKVPISGDVLLFNLPPEFRPSAPYTVISCWVSSSTHGQEAEGIVIRSDGSVRGNLKYVYDNWIRLDSIRFPTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGW0</accession>
    <name>E3EGW0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mannose-1-phosphate guanylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">manC1</name>
        <name evidence="3" type="ORF">PPSC2_05865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369826.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18830"/>
    <dbReference type="EnsemblBacteria" id="ADO55194">
        <property type="protein sequence ID" value="ADO55194"/>
        <property type="gene ID" value="PPSC2_05865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1201"/>
    <dbReference type="eggNOG" id="COG0662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0836">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035527_1_0_9"/>
    <dbReference type="OMA" id="QRPMYEE"/>
    <dbReference type="OrthoDB" id="224217at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005976">
        <property type="term" value="P:polysaccharide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001538">
        <property type="entry name" value="Man6P_isomerase-2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01050">
        <property type="entry name" value="MannoseP_isomer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="domain" description="MannoseP_isomer" evidence="2">
        <location>
            <begin position="300"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="458" mass="51860" checksum="0CE860DD267803ED" modified="2011-01-11" version="1">MKLVLLSGGSGKRLWPLSNDSRSKQFLKVLESPEGISESMVQRVWRQLGDNGLSESSFIATGRAQVEMIQSQIGSNTRIIVEPERRDTFPAIALTATYLYSIAGVSPDEIIAILPVDPYVEDAFFASVAQLEHTLQESEGKLALIGVVPSYPSEKYGYIIPKNDATQGSTGYREVSHFQEKPDREQAERLMERNALWNCGVFAFKLSYLLDILASKGLPLNYEEMQKQYASLEKISFDYEVVEKEKDIVVLPYDGFWKDLGTWNTLTEEMSHQQVGRGVVTEDCVNTSLINELDIPVAIIGTNDLIVAASPDGILVTNKAESPRIKEVLKAHDQRPMYEERRWGQYRVVDYVKYDEGNEVLTKRIRVHKGKNISYQLHFKRSEIWTIISGEAEIILNEKLHKVKAGDVVRIPEGTKHSILAVTDVDLIEVQTGSELVEEDIVRFCMDWNEISRHQFIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH11</accession>
    <name>E3EH11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvbK</name>
        <name evidence="2" type="ORF">PPSC2_07620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370198.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1594"/>
    <dbReference type="EnsemblBacteria" id="ADO55571">
        <property type="protein sequence ID" value="ADO55571"/>
        <property type="gene ID" value="PPSC2_07620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1576"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108859_2_1_9"/>
    <dbReference type="OMA" id="KCGFRIQ"/>
    <dbReference type="OrthoDB" id="1983082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="17132" checksum="5D3F7C50ACD3A12A" modified="2011-01-11" version="1">MNIRLLKPNENCPLELLLLADPSRQLVEEYLKRGQCYVAEIEHQIVGVYVLLPTRPETIEVVNIAVAEVMHGKGIGRQLVTHAIETARSQGYKTLEIGTGNSSIGQLALYQKCGFRIVGVDLDFFVRHNYLEEIYENGIQCRDMIRMSQDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHB0</accession>
    <name>E3EHB0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YbfM3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybfM3</name>
        <name evidence="2" type="ORF">PPSC2_09105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370518.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21575"/>
    <dbReference type="EnsemblBacteria" id="ADO55901">
        <property type="protein sequence ID" value="ADO55901"/>
        <property type="gene ID" value="PPSC2_09105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1918"/>
    <dbReference type="eggNOG" id="COG0586">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044208_1_0_9"/>
    <dbReference type="OMA" id="WIPWVRT"/>
    <dbReference type="OrthoDB" id="1928533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="201" mass="22223" checksum="7048F926D40F7634" modified="2011-01-11" version="1">MGQILAWILEYGYLAMFGLLALGVAGMPIPDEVLMIAFGGLVSQGHYNFIAALAVTFFGSMTGMMLSYTLGRLLGKPLLHRYGKWVRLTPSRIASSENWFGRYGTWGILFGYFVPGLRHVSSYLAGTTRLGVFRYIGYASAGALLWCGTFLGIGHAVGMHWEQVAKLMEKVTHQVGLIVILLIVLGGIIAWFWNKRKKNIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHF6</accession>
    <name>E3EHF6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosome maturation factor RimP</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rimP</name>
        <name evidence="6" type="synonym">ylxS</name>
        <name evidence="6" type="ORF">PPSC2_10080</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for maturation of 30S ribosomal subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RimP family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370719.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22550"/>
    <dbReference type="EnsemblBacteria" id="ADO56109">
        <property type="protein sequence ID" value="ADO56109"/>
        <property type="gene ID" value="PPSC2_10080"/>
    </dbReference>
    <dbReference type="GeneID" id="66577899"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2125"/>
    <dbReference type="eggNOG" id="COG0779">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070525_2_0_9"/>
    <dbReference type="OMA" id="YIHVSLY"/>
    <dbReference type="OrthoDB" id="1595498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01734">
        <property type="entry name" value="YlxS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01077">
        <property type="entry name" value="RimP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003728">
        <property type="entry name" value="Ribosome_maturation_RimP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028998">
        <property type="entry name" value="RimP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036847">
        <property type="entry name" value="RimP_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028989">
        <property type="entry name" value="RimP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035956">
        <property type="entry name" value="RimP_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33867">
        <property type="entry name" value="PTHR33867"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02576">
        <property type="entry name" value="DUF150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17384">
        <property type="entry name" value="DUF150_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74942">
        <property type="entry name" value="SSF74942"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75420">
        <property type="entry name" value="SSF75420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="DUF150" evidence="4">
        <location>
            <begin position="14"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="DUF150_C" evidence="5">
        <location>
            <begin position="88"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="17100" checksum="06EBF5D704A833FC" modified="2011-01-11" version="1">MSTPKIKSVVEEMAQPYLDEHGFELVDVEYVKEGSNWFLRVFVDKDGGIDLDDCSMISEYLGQKLDENDPVSTAYFLEVSSPGAERPLKKAEDVTKAVGKNVFVTTYEPINGLKEFEGRLLSFEDGELTVQSGQKKHTIPYDKVAGARLAIIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHK8</accession>
    <name>E3EHK8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Arginine--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Arginyl-tRNA synthetase</fullName>
            <shortName evidence="8">ArgRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">argS</name>
        <name evidence="12" type="synonym">argS3</name>
        <name evidence="12" type="ORF">PPSC2_10325</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg)</text>
            <dbReference type="Rhea" id="RHEA:20301"/>
            <dbReference type="Rhea" id="RHEA-COMP:9658"/>
            <dbReference type="Rhea" id="RHEA-COMP:9673"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78513"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.19"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 9">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.19" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370768.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22795"/>
    <dbReference type="EnsemblBacteria" id="ADO56161">
        <property type="protein sequence ID" value="ADO56161"/>
        <property type="gene ID" value="PPSC2_10325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2175"/>
    <dbReference type="eggNOG" id="COG0018">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006406_6_1_9"/>
    <dbReference type="OMA" id="NKPLHLG"/>
    <dbReference type="OrthoDB" id="1146366at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004814">
        <property type="term" value="F:arginine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006420">
        <property type="term" value="P:arginyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00671">
        <property type="entry name" value="ArgRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00123">
        <property type="entry name" value="Arg_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001278">
        <property type="entry name" value="Arg-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005148">
        <property type="entry name" value="Arg-tRNA-synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036695">
        <property type="entry name" value="Arg-tRNA-synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035684">
        <property type="entry name" value="ArgRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008909">
        <property type="entry name" value="DALR_anticod-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11956">
        <property type="entry name" value="PTHR11956"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03485">
        <property type="entry name" value="Arg_tRNA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05746">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00750">
        <property type="entry name" value="tRNA-synt_1d"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01038">
        <property type="entry name" value="TRNASYNTHARG"/>
    </dbReference>
    <dbReference type="SMART" id="SM01016">
        <property type="entry name" value="Arg_tRNA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00836">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55190">
        <property type="entry name" value="SSF55190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00456">
        <property type="entry name" value="argS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Arg_tRNA_synt_N" evidence="11">
        <location>
            <begin position="4"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="DALR_1" evidence="10">
        <location>
            <begin position="445"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="117"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="574" mass="64474" checksum="36636CB394018B32" modified="2011-01-11" version="1">MLLMIATQAIVAHTGLEEKEVLSLFEVPPQPEWGDVAFPCFALAKKFRKSPQHIAMELAELVSHEAGLTASASGAYVNITLDRSVHIPPMLAELSKAEFLKPNTGYGQRVVIDMSSPNIAKPFGIGHLRSTVIGAALYRILGETGYVPISVNHLGDWGTQFGKQIAAYKRWGNEEQLQHDPIGESLKLYVRFHQEAEHDPSLEEEGREWFRRLEQGDTEAQQLWEFFVEVSLSEFDRMYQRLNISFDHVLGESFYNDKMQAVVAQLRAKGLLEESDGALVVRLEDEQLPPCLILKKDGTTIYPTRDLATAIYRHEVMKADRLLYVVGGEQKLHFQQVFAVLKHAGEIWAEQCEHVPFGLMRFAGKKMSTRRGKVVKLEEVLDEAVARAQAIITEKNPNLLEQQAIAEDVGIGAIIFGDLKNNRLNEVDFSLEEALTFEGETGPYVQYTHARIRSLLEKARARSDVDSNSSDNVLAQDGHSPDLNIVSDEMLGDAGWALLKQLDRYHGQLIRAARQLEPSVIARFALDTAQAFNRFYAKERIVDGGQWRIQLAEQTADMLASTLRLLGLKAPNRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHN8</accession>
    <name>E3EHN8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tnpA1</name>
        <name evidence="4" type="ORF">PPSC2_10945</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370906.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2328"/>
    <dbReference type="EnsemblBacteria" id="ADO56300">
        <property type="protein sequence ID" value="ADO56300"/>
        <property type="gene ID" value="PPSC2_10945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2317"/>
    <dbReference type="eggNOG" id="COG3464">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041900_2_0_9"/>
    <dbReference type="OMA" id="AYIPMAR"/>
    <dbReference type="OrthoDB" id="1128314at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002560">
        <property type="entry name" value="Transposase_DDE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032877">
        <property type="entry name" value="Transposase_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029261">
        <property type="entry name" value="Transposase_Znf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01610">
        <property type="entry name" value="DDE_Tnp_ISL3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13542">
        <property type="entry name" value="HTH_Tnp_ISL3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14690">
        <property type="entry name" value="zf-ISL3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="zf-ISL3" evidence="3">
        <location>
            <begin position="31"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="HTH_Tnp_ISL3" evidence="2">
        <location>
            <begin position="86"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="DDE_Tnp_ISL3" evidence="1">
        <location>
            <begin position="149"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="444" mass="52615" checksum="E217E814EF2EF1A9" modified="2011-01-11" version="1">MDILNLSKFNILSISENEFDFLIQVVTNSPPLACPHCGCIANLYKHDSREQIYMDLPIHGKRVGLLLKRQRYRCRDCNRTFWEHLDHTIDEKRNCTKRLLSYIEKQSLKRTFVSISEDVGLHEKTIRNIFRDYINRLKETLRFETPNWLGIDEIHIIKPRCVLTNIEEHTLLDVLPNRNKETVVGYLSRLPNRGQIRYVTMDMWQPYKDAVRAILPKALIIVDKFHVVRMANQALETIRKQLRGGLSPRERRGLMHDRFILLKRRIELTEMDKITLDLWTKNHPSLGTAYDLKESYFDIWECDSRQTAILKYNEWKVKIPTELQSAFEPLTKAMKNWEQEIFAYFDHRITNAYTESLNSLVRVINRLGRGYSFEALRAKILFTEGLKKQRKPKYQRRFDSYDLREGNFPMLNMPPVGVVREPEEIILLGIDFSTLIEKLEKDQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIB2</accession>
    <name>E3EIB2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Serine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hprK3</name>
        <name evidence="1" type="ORF">PPSC2_06005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369857.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18970"/>
    <dbReference type="EnsemblBacteria" id="ADO55225">
        <property type="protein sequence ID" value="ADO55225"/>
        <property type="gene ID" value="PPSC2_06005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1231"/>
    <dbReference type="eggNOG" id="COG1493">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073290_1_0_9"/>
    <dbReference type="OMA" id="EDLVAYP"/>
    <dbReference type="OrthoDB" id="1794568at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="347" mass="39021" checksum="B1A0B3F629E3FC40" modified="2011-01-11" version="1">MHDRSTHIRRVKYTAFGLRIASELTLPELIPAKQGVGEDVVIRQADLSAWRDQLEQTNFVMQGERFMFLIPGTAIYAIRGGQEIEVSMLPGADPDTVRLFVLGTCMGVLLLQKRILPIHGSAVAIGGRAYAFVGESGTGKSTLAAAFRQAGYQMISDDVIAINITASAAIVYPAYPQQKLGLESLLQLEALRENRHVRQRKHVLSLTDDNPVRAQYRDLRRIAGEFNKYAVPTVDEFYNDPLPLGGVFELVSDSPNRELMREGEPVAVTEQPLNKLECLHTLLQHTYRRVIIPRMGLGEWYFDTAARMARKVEGWRLLRDSSFFTASEVVQRVLELIHKEEKSYGSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIB6</accession>
    <name>E3EIB6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">hetA</name>
        <name evidence="10" type="ORF">PPSC2_06025</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369861.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EIB6"/>
    <dbReference type="STRING" id="1406.LK13_18990"/>
    <dbReference type="EnsemblBacteria" id="ADO55229">
        <property type="protein sequence ID" value="ADO55229"/>
        <property type="gene ID" value="PPSC2_06025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1235"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="FSRLWPR"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
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    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
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    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="37"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="153"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="180"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="264"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="20"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="375"/>
            <end position="610"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="409"/>
            <end position="416"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="619" mass="69467" checksum="7719FDDF797FB45D" modified="2011-01-11" version="1">MTHLRIYMTKLYAVNGGALILNIGCMIIVSLLEGVGIYMLIPMLAAIGVFGGHSEMPFLSDGFDYFLPYIPKSWLLPGMLMLFVVLLTGQAWLQRYQSILSSRIQQRFMRCLRIDVYTSFMKAQWAFYLRQRKSDFSHVMTTELARVSQGTNLLLQLTTAVMFTLIQIALAFWLSPSLTGLVFLSGLVLFVVFRRSIRNAKQLGDRTTELSQAYFAGITDHMNGMKDIKSNLLEAANIHWFRSLTQRMEDNTTQFVRQNATTQFFHRIAAAVFVVSVLFVSLQWLHVTPERLIVLILIFSRLWPRFALIQASLEYIMSMISAFESVTKVQRECEAFSDPSLIGLTSSKALVPFDSSVYHLPSISARQPLSLGNGIECSHLDYCYEGAAEPALRHINLFIPARGMTAIVGKSGAGKSTLVDVLMGFLRPTEGQIKIDGHVLDDELLPLWRQSFGYVSQDPFLFHATVRENLKLADKDASEQQLWEALHFAAADNFVSRLPEGLDTVIGDRGIRLSGGERQRLVLARAILHHPPVLILDEATSALDGEHEAAIQAALERMKGQMTLIVIAHRLSTIRHADQIVVMDQGEVIQQGNYRQLEEEERGAFSQLLSYQSSISAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIZ5</accession>
    <name>E3EIZ5_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2204"/>
    <dbReference type="EnsemblBacteria" id="ADO56176">
        <property type="protein sequence ID" value="ADO56176"/>
        <property type="gene ID" value="PPSC2_10390"/>
    </dbReference>
    <dbReference type="GeneID" id="66577837"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2190"/>
    <dbReference type="eggNOG" id="ENOG50305ZS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2259763_0_0_9"/>
    <dbReference type="OMA" id="IMEAKFP"/>
    <dbReference type="OrthoDB" id="1767392at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12131" checksum="FC4BB4320ED31151" modified="2011-01-11" version="1">MILTVLSGRQETEWFDIEVADEYSVEHLKLMLGVRIFGEPPAEGMQYIMEAKFPEGLWFRVEDNQLLTGAGLREGCTVRIQRAFSTTQDEAPVYGRRSLFQTEKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJE8</accession>
    <name>E3EJE8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gramicidin S biosynthesis grsT protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aveG</name>
        <name evidence="3" type="ORF">PPSC2_11870</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thioesterase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO56498">
        <property type="protein sequence ID" value="ADO56498"/>
        <property type="gene ID" value="PPSC2_11870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2514"/>
    <dbReference type="eggNOG" id="COG3208">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070456_2_0_9"/>
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    <dbReference type="OrthoDB" id="1119700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012223">
        <property type="entry name" value="TEII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001031">
        <property type="entry name" value="Thioesterase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11487">
        <property type="entry name" value="PTHR11487"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00975">
        <property type="entry name" value="Thioesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioesterase" evidence="2">
        <location>
            <begin position="5"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="27707" checksum="E971B53AE8B4CEC2" modified="2011-01-11" version="1">MAPITLFFIPYAGGSASVSFKWKKLLLPQIKLVPLELAGRGIRSGEPLKDSIEEMSEDLLHQISQELVPGDPYAIYGHSMGTMIAFELYYKLVAGGYGKPAHLFVSGGRAPHVPRNVPWLHDLPADQFRTHLRRYGQLSEAIFDNQELYDYFMPVLRADFKAVEMYKYMDKDTPLHCPITALTGLTDNTVTLQDAEAWAQHTDQQFRVFTFEGGHFFIHDEVERITNIINESLELSTVTSRIQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJI5</accession>
    <name>E3EJI5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_12060</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371139.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56535">
        <property type="protein sequence ID" value="ADO56535"/>
        <property type="gene ID" value="PPSC2_12060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2551"/>
    <dbReference type="HOGENOM" id="CLU_163206_3_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168972" evidence="3">
        <location>
            <begin position="32"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="26"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="87" mass="9355" checksum="9A85901BB900423D" modified="2011-01-11" version="1">MKKQIVTAVTSICLFAALATPSLAQSPNVNAANDPAQNPYQSNNPTYNANNVRANAVDNDNDMDWGWLGLLGLIGLAGMRRKVSDHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJK4</accession>
    <name>E3EJK4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gutB</name>
        <name evidence="5" type="ORF">PPSC2_12150</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371158.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EJK4"/>
    <dbReference type="STRING" id="1406.LK13_24500"/>
    <dbReference type="EnsemblBacteria" id="ADO56554">
        <property type="protein sequence ID" value="ADO56554"/>
        <property type="gene ID" value="PPSC2_12150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2569"/>
    <dbReference type="eggNOG" id="COG1063">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026673_11_0_9"/>
    <dbReference type="OMA" id="ACHYCRI"/>
    <dbReference type="OrthoDB" id="972769at2"/>
    <dbReference type="BioCyc" id="MetaCyc:MON-18760"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031640">
        <property type="entry name" value="Glu_dehyd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16912">
        <property type="entry name" value="Glu_dehyd_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADH_N" evidence="3">
        <location>
            <begin position="26"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Glu_dehyd_C" evidence="4">
        <location>
            <begin position="144"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="349" mass="37649" checksum="44D65D7BFB2B8853" modified="2011-01-11" version="1">MLALVYKSAWDVALEERPIPEIKKDNDVLVRIRATGVCGTDLGIISGKYHAVPSTILGHESAGDVVAVGSAVSSLKPGDRVVIDPTYYCGQCEMCRTGRQNHCTHKSVTETGVSADGTFTDYYVTEDRFLYKLKDHISYEEATLTEPLSCMLTGINQINLLPNFTTVIIGAGPIGILYSYALASKGVTGCLVDISEERLAIADSIAPERWSAHATLEAAIHRLAPAKNQVDMIVDTTGVVGTEVLSQLASGGYLMLVGLRDGISSFNPKEVVDRSLKIIGSIDSLGTFSTAHYLIEQQIIPAKKIITHSYPLDDYHEAFKTLGCNISERTLQPSSQAIKIVLQSNGSGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK73</accession>
    <name>E3EK73_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386196.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0392"/>
    <dbReference type="EnsemblBacteria" id="ADO59782">
        <property type="protein sequence ID" value="ADO59782"/>
        <property type="gene ID" value="PPSC2_26255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5529"/>
    <dbReference type="HOGENOM" id="CLU_2751588_0_0_9"/>
    <dbReference type="OMA" id="DIYWEDW"/>
    <dbReference type="OrthoDB" id="2101403at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="66" mass="7572" checksum="62964CF29275C57F" modified="2011-01-11" version="1">MKSTPCEFEVIVDVYWDRWGRLVKVFRKGELCEGKLWSDGTVSAESTIYDGISDQLDPDCIVIRKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKG7</accession>
    <name>E3EKG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386213.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0409"/>
    <dbReference type="EnsemblBacteria" id="ADO59799">
        <property type="protein sequence ID" value="ADO59799"/>
        <property type="gene ID" value="PPSC2_26165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5510"/>
    <dbReference type="HOGENOM" id="CLU_1813916_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16537" checksum="8B3025B236A93FFB" modified="2011-01-11" version="1">MDNTVKEVKVGDTLTRVIVSLGKDEYLKVNITKHIVTRQFSEEGFCIDNTYFKIYKNNLNKIKTHYVKDGFSSEMFLIGSDKETITKCQDQLIEIIKMDVDNLLKEAMNFNERIRGRKKVYVSEVDRTPWGEDSTSMQVVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKN5</accession>
    <name>E3EKN5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">Ribonucleoside-diphosphate reductase</fullName>
            <ecNumber evidence="4 12">1.17.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_27650</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="14 15">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
            <plasmid evidence="14 15">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>[thioredoxin]-disulfide + a 2'-deoxyribonucleoside 5'-diphosphate + H2O = [thioredoxin]-dithiol + a ribonucleoside 5'-diphosphate</text>
            <dbReference type="Rhea" id="RHEA:23252"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="EC" id="1.17.4.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Genetic information processing; DNA replication.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the ribonucleoside diphosphate reductase large chain family.</text>
    </comment>
    <dbReference type="EC" id="1.17.4.1" evidence="4 12"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59486.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886159.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0092"/>
    <dbReference type="EnsemblBacteria" id="ADO59486">
        <property type="protein sequence ID" value="ADO59486"/>
        <property type="gene ID" value="PPSC2_27650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5857"/>
    <dbReference type="eggNOG" id="COG0209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000404_4_1_9"/>
    <dbReference type="OrthoDB" id="357568at2"/>
    <dbReference type="UniPathway" id="UPA00326"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004748">
        <property type="term" value="F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005144">
        <property type="entry name" value="ATP-cone_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013346">
        <property type="entry name" value="NrdE_NrdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000788">
        <property type="entry name" value="RNR_lg_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013509">
        <property type="entry name" value="RNR_lsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008926">
        <property type="entry name" value="RNR_R1-su_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039718">
        <property type="entry name" value="Rrm1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11573">
        <property type="entry name" value="PTHR11573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02867">
        <property type="entry name" value="Ribonuc_red_lgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00317">
        <property type="entry name" value="Ribonuc_red_lgN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01183">
        <property type="entry name" value="RIBORDTASEM1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48168">
        <property type="entry name" value="SSF48168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02506">
        <property type="entry name" value="NrdE_NrdA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51161">
        <property type="entry name" value="ATP_CONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00089">
        <property type="entry name" value="RIBORED_LARGE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6 12" id="KW-0235">DNA replication</keyword>
    <keyword evidence="7 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 12 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-0614">Plasmid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-cone" evidence="13">
        <location>
            <begin position="2"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO59486.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="785" mass="89964" checksum="1C40867B3B0FC932" modified="2015-05-27" version="2">MQYVLKPNNRKLKFDQERLKESIDRYMIDFPHLDGNRMYRLVLAKLKTEEINAADITRTIYMTAVELISIEEPDWTYIASAAYVNKLYKEAALHRGYKSYPAKPYGSFSTLIKQLVCKGIYKRELIEEFTEQELLKLEETIDYKKDKLFDYIGIVTLQERYLASDYDGKTMELPQERLMLIAMDLMIDAGKMLDEKGKPTDDFLPGGRKERLSYIQEAYWAMSHLYMTTATPTLSNAGKAKGGQLSSCFIDTVDDDLRSIFDSNTDVARLSKVGGGIGVYVGKVRSRGAKIRGYEHKSSGLVPWIRQLNNTAVSVDQLGTRKGSIAVYLDVWHKDILAFLDLKLNNGDERMRAHDIFTGVCIPDLFMERVERREEFYLFDPHEVRTFMGWSLEDYYDEEPGDGTFRRKYQECVDHPLLSRVALPAIDIMKRMMKAQLETGTPYMFYRDTVNRANPNKAHGIIYSSNLCVEIMQNMSATTVAEEKLVEIDGEKMIMTLKRPGDFVVCNLASISLARAVKEGVLERLIPIMIRMLDNVIDLNQIDVLQATHTNQKYRAIGLGTSGLHHLLALLGIMWESEEANEYNDHLYEWIAYLAIKASMQLAKEKGSYPLFKGSEWETGKYFSDRDYTSGKREGKFVTTEQWIELANQVKKHGIRNGYLLAIAPTGSTSIIAGTTASIDPIYKLLTYQEKTTYKIANPAPDLNVKTIQYYRKNAFLLDQLASIRMNATRQRHIDQSQSFNLYIRPDIKAKDFLVLHLQAWKSGVKTTYYVRSQALTVDECDSCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKT1</accession>
    <name>E3EKT1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385946.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59532">
        <property type="protein sequence ID" value="ADO59532"/>
        <property type="gene ID" value="PPSC2_27430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5806"/>
    <dbReference type="HOGENOM" id="CLU_651879_0_0_9"/>
    <dbReference type="OrthoDB" id="2112263at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025855">
        <property type="entry name" value="Replic_Relax"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13814">
        <property type="entry name" value="Replic_Relax"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="437" mass="52071" checksum="49EC7E3CC399AD56" modified="2011-01-11" version="1">MKKSLNELMRSLSTSNVDTLMSIYSFRCLNENQIYQIHFQHVTPINEKLSRELAKACIHDLLSFELIKEVKYKGEEHVYFLTPSGIEVIRHFFELPTNIYDAQKKVVKRGYYRASELEIYPKNINHQAHLNQFVIDFQQLKLDVNCKYFDEKHVSQYTSIRPDGMLSILDTDFFLEMDMATESKKQLFEKWENYRNFLTSREYAYREKRITVLFIVEGTSKIKERIDLIKYTIYERLLDVLDDEFEIFVGTREDLLCLMKKRLIPACKDVDPYIAKIKHVLEEKHGFFANDAEQTRSIFQGTKYGLYIRKLNDNNKILIENGKIQEFVVDDYFFEPTSTIAKIAYMDKSNSFFKSQFNREISYLVIGESEEQMYTDLKMIDLIGLKNIYFSTYQRLKEKPFHEAIFQFDLLGNIHHFVNNGFEERVFEENLEHAHLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKY5</accession>
    <name>E3EKY5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28710</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386304.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0501"/>
    <dbReference type="EnsemblBacteria" id="ADO59890">
        <property type="protein sequence ID" value="ADO59890"/>
        <property type="gene ID" value="PPSC2_28710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6092"/>
    <dbReference type="eggNOG" id="ENOG50307DW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1894169_0_0_9"/>
    <dbReference type="OrthoDB" id="2007463at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="134" mass="15953" checksum="1C48B899CA727CEB" modified="2011-01-11" version="1">MDYYLEDRNVINRLIREWKQYGRLVIAYDFDNTVFDYHGEGHSYENIVKLLRDCKEEGAYLIVFTSRRDEELPFVCKYLNDKHIPYDSINEQPPFLNFEGRKIYYNILLDDRAGLQSAFSSLCAALQYVQQSKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL64</accession>
    <name>E3EL64_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Probable nicotinate-nucleotide adenylyltransferase</fullName>
            <ecNumber evidence="6">2.7.7.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Deamido-NAD(+) diphosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Deamido-NAD(+) pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Nicotinate mononucleotide adenylyltransferase</fullName>
            <shortName evidence="6">NaMN adenylyltransferase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nadD</name>
        <name evidence="8" type="ORF">PPSC2_27010</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="8 9">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
            <plasmid evidence="8 9">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 6">Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP + H(+) + nicotinate beta-D-ribonucleotide = deamido-NAD(+) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22860"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57502"/>
            <dbReference type="ChEBI" id="CHEBI:58437"/>
            <dbReference type="EC" id="2.7.7.18"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 6">Cofactor biosynthesis; NAD(+) biosynthesis; deamido-NAD(+) from nicotinate D-ribonucleotide: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the NadD family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.18" evidence="6"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386040.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0233"/>
    <dbReference type="EnsemblBacteria" id="ADO59626">
        <property type="protein sequence ID" value="ADO59626"/>
        <property type="gene ID" value="PPSC2_27010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5711"/>
    <dbReference type="eggNOG" id="COG1057">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069765_3_0_9"/>
    <dbReference type="OMA" id="FQHRHNM"/>
    <dbReference type="OrthoDB" id="1433958at2"/>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00332"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004515">
        <property type="term" value="F:nicotinate-nucleotide adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02165">
        <property type="entry name" value="NMNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00244">
        <property type="entry name" value="NaMN_adenylyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005248">
        <property type="entry name" value="NadD/NMNAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01467">
        <property type="entry name" value="CTP_transf_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00482">
        <property type="entry name" value="TIGR00482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4 6" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CTP_transf_like" evidence="7">
        <location>
            <begin position="6"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="206" mass="23865" checksum="65BF2F6266BCF533" modified="2011-01-11" version="1">MAKIGFFGASFDPITNSHLWTATKIAEEYNLSQVIMGPGSNKRPDKQMNISDAHRWNLLQLAISNDSLFVADDFEMKQDASAIYTYFTMEHYKQLYPLDQVYFIMGADLLVDIAKGEWLYGKELVENNLFLVMSRDGINMKEVISSSAFLQPYSEHFHLIEKGMNMEISSSYIRGELRKHPNARHLKHLMPCPCYDYIMEHGLYQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELE5</accession>
    <name>E3ELE5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tryptophan RNA-binding attenuation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386391.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0588"/>
    <dbReference type="EnsemblBacteria" id="ADO59977">
        <property type="protein sequence ID" value="ADO59977"/>
        <property type="gene ID" value="PPSC2_28295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6000"/>
    <dbReference type="eggNOG" id="COG2013">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057502_0_0_9"/>
    <dbReference type="OMA" id="MVAYEGF"/>
    <dbReference type="OrthoDB" id="1063432at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002838">
        <property type="entry name" value="AIM24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036983">
        <property type="entry name" value="AIM24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016031">
        <property type="entry name" value="Trp_RNA-bd_attenuator-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01987">
        <property type="entry name" value="AIM24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51219">
        <property type="entry name" value="SSF51219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="29284" checksum="0DAEB48BAD3738E4" modified="2011-01-11" version="1">MPFQFEVDRELFLKATGDGHFFAKKGTMVADQGKFKYSKRLLGTNEGNIVGRVLNHVGRRVTGENLEIMEVEGSGMVFLSDQEAHVTIITLEDNGPWQNIKVESEDLLAFTEQCHYGVSIVGTGILSQRGLFTSQLSFNGYGAQVAIKTKGNPLVLQAPCRVDPDAVVAWTGANPTPKLDVNLKTFIGQTSGESYMYEFNEPGQIVIVQPFERESGVKFGIDDKRYQPEEQSSAFKNTFGGGLGGMAQGGQPQGQQSGIGGLIGNLLGGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBX5</accession>
    <name>A0A0D5ZBX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324536.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3470"/>
    <dbReference type="EnsemblBacteria" id="AKA44280">
        <property type="protein sequence ID" value="AKA44280"/>
        <property type="gene ID" value="PPSC2_16245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3469"/>
    <dbReference type="HOGENOM" id="CLU_2194361_0_0_9"/>
    <dbReference type="OrthoDB" id="1905837at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="12503" checksum="C8CB75B55EBBB083" modified="2015-05-27" version="1">MNHRFKTPLAVYRVGQKRDDDDLFDDRKSDKITDVKCFVVTTTTEAKADSKPVMYIVKKTIGIPKQADVKLSDEVVLLGRRYLVIDSIPRRYWRELLVTCEVKGNDRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC78</accession>
    <name>A0A0D5ZC78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_01485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016820169.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0300"/>
    <dbReference type="EnsemblBacteria" id="AKA44179">
        <property type="protein sequence ID" value="AKA44179"/>
        <property type="gene ID" value="PPSC2_01485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.294"/>
    <dbReference type="eggNOG" id="ENOG50338CR">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_166811_0_0_9"/>
    <dbReference type="OrthoDB" id="1959436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="12854" checksum="8DE97DF34F31D587" modified="2015-05-27" version="1">MAIRPPQTLKSTGRKVPVTRYRNVSPTQTLRRFTVIWANNDGVPFNTSGFFATLRRLDGTFVQAAGFDRFGTARFNRVRTPTNQPYILRTFRDDGVLFRVRSVPAGVSSFVVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCI4</accession>
    <name>A0A0D5ZCI4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stage V sporulation protein AC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoVAC</name>
        <name evidence="3" type="ORF">PPSC2_17180</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016821646.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04515"/>
    <dbReference type="EnsemblBacteria" id="AKA44286">
        <property type="protein sequence ID" value="AKA44286"/>
        <property type="gene ID" value="PPSC2_17180"/>
    </dbReference>
    <dbReference type="GeneID" id="66576608"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3669"/>
    <dbReference type="eggNOG" id="ENOG5031DDD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112786_0_1_9"/>
    <dbReference type="OrthoDB" id="1888224at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014203">
        <property type="entry name" value="Spore_V_AC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005562">
        <property type="entry name" value="SpoVA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38450">
        <property type="entry name" value="PTHR38450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03862">
        <property type="entry name" value="SpoVAC_SpoVAEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02838">
        <property type="entry name" value="spore_V_AC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="101"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="141"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="17451" checksum="05CC6591F400ED06" modified="2015-05-27" version="1">MPAKSGQRGFRTNSSPLSINEKDYQSVSQKHEPSRKVFANCVRAFLVGGVICVIGQAIQEAFMAGMHIPAKEAAAPTASMMILLSVILTCIGVYDKIAQWAGAGTAVPITGFANSMCSAALEYRSEGLVLGVGANMFKLAGSVVVFGVVAAFIVGVIYAILGVGGNHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCZ2</accession>
    <name>A0A0D5ZCZ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886255.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44392">
        <property type="protein sequence ID" value="AKA44392"/>
        <property type="gene ID" value="PPSC2_28195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5979"/>
    <dbReference type="HOGENOM" id="CLU_2754146_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="70" mass="8412" checksum="F2ADB0519D9F459A" modified="2015-05-27" version="1">MFKMKKRSGDFHRNFTVLGLKCTHTERSDDLNPPFPFYLYVAGMRMGTKQKRKLYLAAIKYRCGIKEWYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E477</accession>
    <name>E3E477_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ccpA1</name>
        <name evidence="5" type="ORF">PPSC2_12430</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00120"/>
    <dbReference type="EnsemblBacteria" id="ADO56617">
        <property type="protein sequence ID" value="ADO56617"/>
        <property type="gene ID" value="PPSC2_12430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2636"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_1_9"/>
    <dbReference type="OMA" id="VSNDQMA"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001761">
        <property type="entry name" value="Peripla_BP/Lac1_sug-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00532">
        <property type="entry name" value="Peripla_BP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="35923" checksum="3BFF2C2E9AD03F39" modified="2011-01-11" version="1">MANVSISTVSRVINNSQTVNSEIRKRVQDVLEATQFRPNAIARTLVKNDTSLIGVLLPAIKNNVFDDMVEGINQVAHLYGFDVIIALSGGDEDSEIHYYNMFREMQASGIIISVSEIRDALFALIEAAGIPCILVGRDFRDQSIPSVHVDNITAAFEAVTYLIQQGHQDIAMLQGPTGDISVGNQRFLGYEQALKTAHLPVRAERVLESGFSVEDGITSMRKLYHSGPLPSAVFCATDRIAIGAMNFLAENGVKVPEQVSFLGFDDIDMATIIRPKLSTVRYSASELGMVAARNLIKLIRGEELAAVHWSISHQLEIRDSITKHRVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4H4</accession>
    <name>E3E4H4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371476.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01330"/>
    <dbReference type="EnsemblBacteria" id="ADO56873">
        <property type="protein sequence ID" value="ADO56873"/>
        <property type="gene ID" value="PPSC2_13640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2902"/>
    <dbReference type="eggNOG" id="COG1192">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082997_0_0_9"/>
    <dbReference type="OMA" id="AVQHEAC"/>
    <dbReference type="OrthoDB" id="1041798at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="31456" checksum="DC249B7496898718" modified="2011-01-11" version="1">MSTILFWSPIKGASGSSSLAAAIAITIGNLYRGRLLLTHLGRRHTGIESGFPIQEYAMDDPSLQIQEGGWEAVSRLVLRGTLSRENIRNYTIPVLEHTLDVLEGTSGFGAAPPLLSPDLVRVVIDTANQYYDLTLIDAGSGGGWGAVQHEACARAKLAVLSLTQNMRELDAYFESVSPLSTYSSLPLLIVLGKYDVHSQANEANIRRRYGYKGTLYTVPYSTEFMDAWNRRDVIGHVQREVRSGKDQQRKLFMSVGWAQSVRQISKAILEAVESDLRLKALERGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4J6</accession>
    <name>E3E4J6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YkkA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ykkA</name>
        <name evidence="1" type="ORF">PPSC2_13740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371497.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56895">
        <property type="protein sequence ID" value="ADO56895"/>
        <property type="gene ID" value="PPSC2_13740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2925"/>
    <dbReference type="eggNOG" id="COG2318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2790066_0_0_9"/>
    <dbReference type="OrthoDB" id="2047691at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="8139" checksum="3550E01BF2C617AD" modified="2011-01-11" version="1">MVEGNYNRLKSIVQDMKQSELDYKGPDHKYNSTSQLIRHLSYVDLKWVYRIKGEKIFLNILSKLWSYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4K4</accession>
    <name>E3E4K4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56903.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2938"/>
    <dbReference type="EnsemblBacteria" id="ADO56903">
        <property type="protein sequence ID" value="ADO56903"/>
        <property type="gene ID" value="PPSC2_13770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2934"/>
    <dbReference type="eggNOG" id="COG3293">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055261_2_1_9"/>
    <dbReference type="OrthoDB" id="2020052at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56903.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="124" mass="14366" checksum="BAE5D2C74315C6DE" modified="2015-05-27" version="2">MRRRYELTDEEWNIVDPLLPPARKKQGGRPPKDRRQMLNAVLWVARTGAPWRDLPSYYGPWSSAYSFFWRLQKANIWGEILKHVAIEPDWEQVMVDATIVRVHQHGAGAKGGRTGKQSDVRAED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4M1</accession>
    <name>E3E4M1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjbB</name>
        <name evidence="3" type="ORF">PPSC2_13850</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371521.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2959"/>
    <dbReference type="EnsemblBacteria" id="ADO56920">
        <property type="protein sequence ID" value="ADO56920"/>
        <property type="gene ID" value="PPSC2_13850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2955"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034180_1_0_9"/>
    <dbReference type="OMA" id="DGCANPI"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="27"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="218"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="251"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="281"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="304"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="342"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="370"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="402" mass="44027" checksum="FE171B48DDCC1980" modified="2011-01-11" version="1">MKLNKNFSLLLLGQSLANIGDVLYIVGVISTIFVLTGSAIAASFVPFTIASSMFISSLLTPLLVEKLNLKWLLAGSQIVKTILLFILGFMLIGLTAANYYFIFLIIGLIAFFDGCANPIRQTLTPYYVKPECLIQANGIAETITQTIQAGMWFVGSSLLIIMSSQQLIWLVGCLFVIASILLCLLESVNHKTTEQKGKLEKIKEGWKTLSNTPVLRRIAWIEFLETIAATVWIAAILYVFVNEALNVDEKWWGFINGANFLGLILGSAYCIKFSSFVEKKIGTFIFVGSFASFLFTILFSINSIPMISLLLSLCVGLFGQIKKIPQQTVIQTSVSKEQLSTVYTSLGAIGTGIFGVGSLVMGVLADLLGIRIVFVISGLLLAIVSTIAHKNKQLFVRNVMEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S6</accession>
    <name>E3E4S6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_14490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371652.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02140"/>
    <dbReference type="EnsemblBacteria" id="ADO57054">
        <property type="protein sequence ID" value="ADO57054"/>
        <property type="gene ID" value="PPSC2_14490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3092"/>
    <dbReference type="eggNOG" id="ENOG50331U7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079874_0_0_9"/>
    <dbReference type="OMA" id="LEDHYET"/>
    <dbReference type="OrthoDB" id="1829592at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014231">
        <property type="entry name" value="Spore_YpjB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09577">
        <property type="entry name" value="Spore_YpjB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168614" evidence="2">
        <location>
            <begin position="37"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="255"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="30912" checksum="6117FA31D12C96CC" modified="2011-01-11" version="1">MIRGRGVRITLRVVLSIVLSMVLLLSVYVPPGMAEARDQSKPEGNTKEIEELDHAAATLYRDVMDGNIEKARADVAEVSRWFSTGQVQAALSVEAIHALSGSILEVQQATQSVQASPDEWVKAAANLRLATDALAHPRQPLWQQYYKILREDVSGLNNQFAKGNMKGFKAGTEVLEDHYETIRTAALIHGRTTEVVRTDSWISYVKGLGDQQNADASAIRGALDQGNPTFNALFGREKDATALAPFIPRESERRAEWAIGMIVLLALAYAGYRKYRAGFIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E505</accession>
    <name>E3E505_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Pyruvate formate-lyase-activating enzyme</fullName>
            <ecNumber evidence="11">1.97.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">pflA</name>
        <name evidence="13" type="ORF">PPSC2_15235</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>glycyl-[formate C-acetyltransferase] + reduced [flavodoxin] + S-adenosyl-L-methionine = 5'-deoxyadenosine + glycin-2-yl radical-[formate C-acetyltransferase] + H(+) + L-methionine + semiquinone [flavodoxin]</text>
            <dbReference type="Rhea" id="RHEA:19225"/>
            <dbReference type="Rhea" id="RHEA-COMP:10622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12190"/>
            <dbReference type="Rhea" id="RHEA-COMP:12191"/>
            <dbReference type="Rhea" id="RHEA-COMP:14480"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:29947"/>
            <dbReference type="ChEBI" id="CHEBI:32722"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:140311"/>
            <dbReference type="EC" id="1.97.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="11">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the organic radical-activating enzymes family.</text>
    </comment>
    <dbReference type="EC" id="1.97.1.4" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371803.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02855"/>
    <dbReference type="EnsemblBacteria" id="ADO57213">
        <property type="protein sequence ID" value="ADO57213"/>
        <property type="gene ID" value="PPSC2_15235"/>
    </dbReference>
    <dbReference type="GeneID" id="66576937"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3252"/>
    <dbReference type="eggNOG" id="COG1180">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058969_1_1_9"/>
    <dbReference type="OMA" id="IGVPNKR"/>
    <dbReference type="OrthoDB" id="1141206at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043365">
        <property type="term" value="F:[formate-C-acetyltransferase]-activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034457">
        <property type="entry name" value="Organic_radical-activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012839">
        <property type="entry name" value="Organic_radical_activase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012838">
        <property type="entry name" value="PFL1_activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001989">
        <property type="entry name" value="Radical_activat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352">
        <property type="entry name" value="PTHR30352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000371">
        <property type="entry name" value="PFL_act_enz"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02493">
        <property type="entry name" value="PFLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01087">
        <property type="entry name" value="RADICAL_ACTIVATING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11" id="KW-0408">Iron</keyword>
    <keyword evidence="10 11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="13" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="12">
        <location>
            <begin position="15"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU362053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="28566" checksum="2CD5629F0012F5F7" modified="2011-01-11" version="1">MLKGHIHSLETFGTVDGPGIRFVLFMQGCLLKCQYCHNPDTWALNEGNPMTLEEVLAEIEPYLAYYRSSGGGLTVSGGEPTLQAHFVAELFKEVKRRWNLHTTLDSNGFNDAGRIHDLLDVTDLVLLDIKHIDNDKHIKLTGKSNDRMLSTARWLSEQGRKMWIRHVFVPGIHDDEQDLLNLGRFIGTLNGVEKFEILPYHQMGVYKWEMLGKAYPLEGVPSPTDEEVQRAYRLIEEGRLETAGTNTACRPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E518</accession>
    <name>E3E518_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">araC9</name>
        <name evidence="3" type="ORF">PPSC2_15285</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371816.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02910"/>
    <dbReference type="EnsemblBacteria" id="ADO57225">
        <property type="protein sequence ID" value="ADO57225"/>
        <property type="gene ID" value="PPSC2_15285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3266"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="ANYTYFH"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="169"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="272" mass="31967" checksum="9E853965FEFB6AB9" modified="2011-01-11" version="1">MSIIEPCQVLTAGYSFHRKPFYSNQPDGIKNYLFRLQTDGRCQARIDGKMTRIEAGDLLLFNPTEPYELDIHSELNPMGEQVVESGDYHIFFGGPWVDEWWNHHKRPNRIKVQLTEALLGLFRQLVLEQRRISNPYPEISSYYIRILCLEFDRILSEQPIATHHNYLAYQIKNYIEENASSNFKLDDVSSHVGISVSRAVHLFKETFDTSIMQYTLDIRLNMARERIIFSPMSLEQAAESSGFANYTYFHRVFRSRFGMSPKEFRLIHREQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5L5</accession>
    <name>E3E5L5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Y4bA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">y4bA</name>
        <name evidence="1" type="ORF">PPSC2_18405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372471.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57892">
        <property type="protein sequence ID" value="ADO57892"/>
        <property type="gene ID" value="PPSC2_18405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3939"/>
    <dbReference type="eggNOG" id="COG1961">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2274605_0_0_9"/>
    <dbReference type="OrthoDB" id="1791095at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="11978" checksum="C4D92E427978CB5B" modified="2011-01-11" version="1">MYVNEGKVTYDAKSVNEQILHSAFVRLFNRMYENKKEFIKTLKGNIESILLSKVEQEPLLDIEGLMQQLKSDLKELVNLKLRNQIDEIVYDEETNRLSSELN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5R6</accession>
    <name>E3E5R6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sulfate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ST2</name>
        <name evidence="7" type="ORF">PPSC2_18610</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Membrane</location>
            <topology evidence="1 5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372522.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05830"/>
    <dbReference type="EnsemblBacteria" id="ADO57943">
        <property type="protein sequence ID" value="ADO57943"/>
        <property type="gene ID" value="PPSC2_18610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3988"/>
    <dbReference type="eggNOG" id="COG0659">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003182_13_1_9"/>
    <dbReference type="OMA" id="VTNKFPI"/>
    <dbReference type="OrthoDB" id="751256at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018045">
        <property type="entry name" value="S04_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="PTHR11814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01130">
        <property type="entry name" value="SLC26A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="123"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="197"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="244"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="376"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="6">
        <location>
            <begin position="431"/>
            <end position="544"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="593" mass="63031" checksum="354DE1D412A198C3" modified="2011-01-11" version="1">MKWRGRFEGYNAGALRKDLISGSIVAIVAIPLGMAFAIASGVKPEYGLYTTIIAGILISLLGGSKFQIGGPTGAFIPILLAIVMQYGYENLLIAGFMAGIMLILMGVLRLGALIKFIPKPVTIGFTAGIAVTIFSGQIANFLGLRGVERHETFLPSMAEIIHRLPSLNVYSILTACICLAGLIVVPKKWPKIPGSLVGLLLSTLVAALFFPGQVATIGSAYGAIPASLPELHIPAMTWELIVKLLPPALVIAMLGAIESLLSAVVADGMTGDRHNSNRELVGQGIANLLTPLFGGIPATGAIARTATNIRNNAVSPMSGIVHGVVVLLILMLFAPYASNIPLASMAPVLMVVAWNMSERKHFAHILKTRTADSIVLVVTFLLTVFTTLTTAVEVGLILAVVLFVKRMSNTLSVDKVLPDPSVKHEKVGAHMVTEQHDCPQVAIYNVEGPLFFGAASALENSGVGGQTGLQQGILLLRMGKVPFMDMTGEANFTALIQKYRKSGGTVLVSGLQPQPLELLHKTGCYDMIGQNHFFEHTGEALTAALAMVNQDRCSGCRQMAFRECTSLCRRTQETKSSFPEGAVSVPIPVNSGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5S1</accession>
    <name>E3E5S1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Arginine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yckI</name>
        <name evidence="6" type="ORF">PPSC2_18635</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372526.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05855"/>
    <dbReference type="EnsemblBacteria" id="ADO57948">
        <property type="protein sequence ID" value="ADO57948"/>
        <property type="gene ID" value="PPSC2_18635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3993"/>
    <dbReference type="eggNOG" id="COG1126">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="FQAYHLF"/>
    <dbReference type="OrthoDB" id="1191583at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="250" mass="27420" checksum="3E0AE9AD0019BC1A" modified="2011-01-11" version="1">MIQIRNIHKSFGSLEVLKGIDVTLDKGKVLVIIGPSGSGKTTLLRCLNLLEVPGQGEIQVGDIALSFAKGTKLRQENILALRKRTGMVFQSYNLFPHMTAVQNVMEGQVTVQKKSKDEARKHALELLKKVGLADKAESYPHQLSGGQQQRVGIARAMAVEPEVLLFDEPTSALDPELVGEVLKVMKQLAAEGMTMVIVTHEMKFAAEVADHVILMDQGVIIEQGTPYQVLEQPTSPRAIQFLNRLSGETE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E619</accession>
    <name>E3E619_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rrf2 family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ywgB</name>
        <name evidence="1" type="ORF">PPSC2_20055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372810.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07290"/>
    <dbReference type="EnsemblBacteria" id="ADO58238">
        <property type="protein sequence ID" value="ADO58238"/>
        <property type="gene ID" value="PPSC2_20055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4275"/>
    <dbReference type="eggNOG" id="COG1959">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107144_1_0_9"/>
    <dbReference type="OMA" id="CAIHAVM"/>
    <dbReference type="OrthoDB" id="1794390at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00738">
        <property type="entry name" value="rrf2_super"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="132" mass="14644" checksum="972ECB82A696E310" modified="2011-01-11" version="1">MKFTKATNYALHTMLMLVTDSSVKPIGVQQLAEAQQVSPTYLSKILTRLVKAGMIESVSGANGGYRLSRNKDDITFLDIIHAIEGTNSLFECDFVHGSECLIQAVMREAEEKMESHLKNTKLVDLAQKQAQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E656</accession>
    <name>E3E656_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YolD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yolD</name>
        <name evidence="1" type="ORF">PPSC2_13000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371345.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00690"/>
    <dbReference type="EnsemblBacteria" id="ADO56741">
        <property type="protein sequence ID" value="ADO56741"/>
        <property type="gene ID" value="PPSC2_13000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2769"/>
    <dbReference type="eggNOG" id="ENOG503387T">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2586416_0_0_9"/>
    <dbReference type="OMA" id="RGQIVKM"/>
    <dbReference type="OrthoDB" id="1880409at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014962">
        <property type="entry name" value="YolD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08863">
        <property type="entry name" value="YolD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="9461" checksum="7A5318D6AA72ADE6" modified="2011-01-11" version="1">MAKAKVPKRPTRDEFVLEEIGNQLVEAQQEQSEVVLTVWGREEATRGQIVKMDSRTGKVHVESNGETDKVPFMDIMSVNYPRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D0</accession>
    <name>E3E6D0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable glycine dehydrogenase (decarboxylating) subunit 1</fullName>
            <ecNumber evidence="4">1.4.4.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Glycine cleavage system P-protein subunit 1</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Glycine decarboxylase subunit 1</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Glycine dehydrogenase (aminomethyl-transferring) subunit 1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gcvPA</name>
        <name evidence="5" type="synonym">yqhJ</name>
        <name evidence="5" type="ORF">PPSC2_18860</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 4">The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>(R)-N(6)-lipoyl-L-lysyl-[glycine-cleavage complex H protein] + glycine + H(+) = (R)-N(6)-(S(8)-aminomethyldihydrolipoyl)-L-lysyl-[glycine-cleavage complex H protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:24304"/>
            <dbReference type="Rhea" id="RHEA-COMP:10494"/>
            <dbReference type="Rhea" id="RHEA-COMP:10495"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83143"/>
            <dbReference type="EC" id="1.4.4.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the GcvP family. N-terminal subunit subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.4.4.2" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372576.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06070"/>
    <dbReference type="EnsemblBacteria" id="ADO57999">
        <property type="protein sequence ID" value="ADO57999"/>
        <property type="gene ID" value="PPSC2_18860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4043"/>
    <dbReference type="eggNOG" id="COG0403">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004620_0_2_9"/>
    <dbReference type="OMA" id="MYDGASA"/>
    <dbReference type="OrthoDB" id="870147at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004375">
        <property type="term" value="F:glycine dehydrogenase (decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019464">
        <property type="term" value="P:glycine decarboxylation via glycine cleavage system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009116">
        <property type="term" value="P:nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00613">
        <property type="entry name" value="GDC-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00712">
        <property type="entry name" value="GcvPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023010">
        <property type="entry name" value="GcvPA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020581">
        <property type="entry name" value="GDC_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42806">
        <property type="entry name" value="PTHR42806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02347">
        <property type="entry name" value="GDC-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006815">
        <property type="entry name" value="GcvPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00033655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="451" mass="48927" checksum="D2F9D31FFD76BFC4" modified="2011-01-11" version="1">MKQHRYLPMTEQDQTEMLRVVGVSSIDDLFSDIPEAIRYQGELPLSSRLDERALTRHMAELAGHNANADTHASFLGAGIYDHHIPSVIQHITSRSEFYTAYTPYQPEVSQGELQAIFEFQSYICELTGMAVANASMYDGATALAEAGSLAASATRRKQLIVSRSVHPEARQVLAAYARGLDLDIVEIGCSDGVTDVDALATAVSEQTAAVLIQNPNFFGAVENLKPMADLIHAHQGLMVVSANPLALGLLETPGKQGADIVVGDAQPLGISSSLGGPTCGYFAVSQAHMRRIPGRIVGQTTDRNGKRGFVLTLQAREQHIRREKATSNICSNQALLALSASVYLSVMGRQGIKEVAELNLHKSRYALEQLMSLKGVSTSFNAPTFNEFALKLPEGTDMSKLQAELLAAGFIAGYDLGRDYEELAGHMLIAVTEQRTKEEIDQFVHTLGELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G8</accession>
    <name>E3E6G8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cysteine desulfurase</fullName>
            <ecNumber evidence="4">2.8.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yrvO</name>
        <name evidence="10" type="ORF">PPSC2_19040</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[sulfur carrier]-H + L-cysteine = [sulfur carrier]-SH + L-alanine</text>
            <dbReference type="Rhea" id="RHEA:43892"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="EC" id="2.8.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.7" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372612.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06250"/>
    <dbReference type="EnsemblBacteria" id="ADO58037">
        <property type="protein sequence ID" value="ADO58037"/>
        <property type="gene ID" value="PPSC2_19040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4080"/>
    <dbReference type="eggNOG" id="COG1104">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003433_0_0_9"/>
    <dbReference type="OMA" id="KGLYWAR"/>
    <dbReference type="OrthoDB" id="839689at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044571">
        <property type="term" value="P:[2Fe-2S] cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010240">
        <property type="entry name" value="Cys_deSase_IscS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016454">
        <property type="entry name" value="Cysteine_dSase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11601:SF34">
        <property type="entry name" value="PTHR11601:SF34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005572">
        <property type="entry name" value="NifS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_5" evidence="9">
        <location>
            <begin position="4"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="41061" checksum="E322A7AE6408C45D" modified="2011-01-11" version="1">MNRIYLDHAASTPMHPEVAQTMMDIMTGQFGNASSVHAFGRDAKRTVSAARDAVAASLGCKPEEIIFTSGGTESDNLALFGTATADGRTSGHIITTAIEHHAVLHACDELEKAGYQVTYVPVNGFGRVNPVDIEAAIRPDTFLISMMYANNEVGVIQPVQEVGQIAREHGIIFHVDAVQAFGHISIDCGNLPIDLLSVSGHKINGPQGVGALYIRRGTRIQPLMHGGLQEKKRRAGTENIAGIAGLAKAATLANASIEERGAHDMALRQTLLKALEGSLGSHEFIINGDPEYFVPNVLNISFPAIGTETMLMNLDMEGIAAASGSACTSGSLELSHVLQAMDLPEDVLNSAIRFSFGLGNTTEEMEYTAKKIETIWKRLRTRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6X8</accession>
    <name>E3E6X8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gerD</name>
        <name evidence="4" type="ORF">PPSC2_22250</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373244.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09715"/>
    <dbReference type="EnsemblBacteria" id="ADO58680">
        <property type="protein sequence ID" value="ADO58680"/>
        <property type="gene ID" value="PPSC2_22250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4718"/>
    <dbReference type="eggNOG" id="ENOG50304MB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092044_0_0_9"/>
    <dbReference type="OMA" id="MKDPEYQ"/>
    <dbReference type="OrthoDB" id="1826396at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041262">
        <property type="entry name" value="GerD_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17898">
        <property type="entry name" value="GerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168030" evidence="2">
        <location>
            <begin position="25"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="GerD" evidence="3">
        <location>
            <begin position="90"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="205"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="26182" checksum="640425F13AF76747" modified="2011-01-11" version="1">MNWTRLRFVSMVCVLGVALSGCGSDQGSAPPQTSYKEMKTMVVDILKSDDGKKAVEEALTGEKEGQSGQSGGGGGAGGSMGMKMLMPTQSAEQMKIAVKDTLISPEYKKEIEKIMTDPRFAGEFAKAINSQSKQLHMQLIKDPSYQKSIEAMLKSPELTKMYMDLTKTPEYRKQSMTVMHDAMQNPIFRLEVMNLLKTVVQEELQPKVEKKGGEQGGSGDQKQDGGGGEGEQGGSEGGQGGGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E738</accession>
    <name>E3E738_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">RNA polymerase factor sigma-70</fullName>
            <ecNumber evidence="5">2.7.7.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sigH</name>
        <name evidence="5" type="ORF">PPSC2_22515</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
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        <property type="protein sequence ID" value="ADO58740.2"/>
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    </dbReference>
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        <property type="protein sequence ID" value="ADO58740"/>
        <property type="gene ID" value="PPSC2_22515"/>
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    <dbReference type="KEGG" id="ppm:PPSC2_22515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4773"/>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
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        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002939">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02859">
        <property type="entry name" value="spore_sigH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="4">
        <location>
            <begin position="60"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="177"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="184"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS00622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58740.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="214" mass="24737" checksum="51E6B2E7994FA267" modified="2015-05-27" version="2">MSVDLKDIMLSKFDYKNDEDIVGAVHEGDGEALEFLINKYRNFVRAKARSYFLIGADREDIIQEGMIGLYKSIRDFKGDKLASFKAFAELCITRQIITAIKTATRQKHIPLNSYVSLDKPIYDEESDRTLLDVICGTQVSDPEELIINQEEFVGLEDKMSEILSELERKVLMLYLDGRSYQEIAEDLDRHVKSIDNALQRVKRKLEKYLEVRDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7F6</accession>
    <name>E3E7F6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">amyD7</name>
        <name evidence="7" type="ORF">PPSC2_24510</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11985"/>
    <dbReference type="EnsemblBacteria" id="ADO59167">
        <property type="protein sequence ID" value="ADO59167"/>
        <property type="gene ID" value="PPSC2_24510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5192"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_0_9"/>
    <dbReference type="OMA" id="IYRDTFQ"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="MetI-like"/>
    </dbReference>
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        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
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        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
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    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="206"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="76"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="298" mass="33316" checksum="1419396863827D62" modified="2011-01-11" version="1">MLKKRGTWGDKGSKLEFGLFTLPVILCITIAFYIPFLMTIRYSLTKWNGISKHPKFVGLDNFKQILLGDANFAHAAWFTIKYAILYIVLVNVLAILLALVLDMKLKSSAWLRAAFFIPYILSLVIVGFIWKFIFMQGFESLDHSTGWGIFQLSWLGEEGLAFISILAVSIWQSIGFYMVIYIAGLQSVPEDLKEAAIVDGAGPIRRFFSIILPMLAPSITISVFMALTNSIKVFDVILSLTGGGPGGTTYSIAYDIYRDTFQNNLYGYGTAKALILFVAVLIITIIQLSIFKRREVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7L5</accession>
    <name>E3E7L5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13385</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371423.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56820">
        <property type="protein sequence ID" value="ADO56820"/>
        <property type="gene ID" value="PPSC2_13385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2851"/>
    <dbReference type="eggNOG" id="ENOG503072E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1132747_0_0_9"/>
    <dbReference type="OrthoDB" id="1778694at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="27514" checksum="26CDBA62C0580D7F" modified="2011-01-11" version="1">MEEGKRILATPLLDDNSLGDCSFFCENHLVAIELWKPKSNYHIPLFHTSHGRFTVPTTLHECSVGLPTFCNLDGSNLVNITQVDKIVTGDYGGGQVVFKNQDIKESINSANLSRWKQIYADAMNADREIRYIFGSEIKVVGKATVSGFFKVGNMLSVDMWEPKKNYYVPRFHSGDRSYTIGLTAQACREAFPYLYPAYKDTLINLDLVCEIESNAFGGLVRFEGSDFTCSMSHNKLKALKKLWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Q0</accession>
    <name>E3E7Q0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Enterochelin esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yjcH3</name>
        <name evidence="1" type="ORF">PPSC2_13550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371458.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01235"/>
    <dbReference type="EnsemblBacteria" id="ADO56855">
        <property type="protein sequence ID" value="ADO56855"/>
        <property type="gene ID" value="PPSC2_13550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2884"/>
    <dbReference type="eggNOG" id="COG2382">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039834_2_0_9"/>
    <dbReference type="OMA" id="YPVVYCQ"/>
    <dbReference type="OrthoDB" id="1828423at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000801">
        <property type="entry name" value="Esterase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00756">
        <property type="entry name" value="Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="28175" checksum="F7E68768FC68DC1E" modified="2011-01-11" version="1">MTDSRYLKRTILKDEVDSRLLGETRTLRIYLPPGYNEILSYPVVYCQDGEEFFNFGRIATHANRLILDEGVEPFIIVGVEVNTKIRTQEYAPFGNRFEAYTACFAEEIIPYVEQKYPIRKDAASRILAGDSLGGSVSLHLALLYPELFNRIISLSGAYYEASQEIIAREKELSHLNVWMTVGLQEDAFESDTGIYNFVELNRQCADLLRERNAEVSYREKDGKHLWGFWQNELPDALMYFLDRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8F8</accession>
    <name>E3E8F8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Phospho-N-acetylmuramoyl-pentapeptide-transferase</fullName>
            <ecNumber evidence="8">2.7.8.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">UDP-MurNAc-pentapeptide phosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 9" type="primary">mraY</name>
        <name evidence="9" type="ORF">PPSC2_16620</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>di-trans,octa-cis-undecaprenyl phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine = di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UMP</text>
            <dbReference type="Rhea" id="RHEA:28386"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:60392"/>
            <dbReference type="ChEBI" id="CHEBI:61386"/>
            <dbReference type="ChEBI" id="CHEBI:61387"/>
            <dbReference type="EC" id="2.7.8.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="8">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the glycosyltransferase 4 family. MraY subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.13" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372092.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03955"/>
    <dbReference type="EnsemblBacteria" id="ADO57507">
        <property type="protein sequence ID" value="ADO57507"/>
        <property type="gene ID" value="PPSC2_16620"/>
    </dbReference>
    <dbReference type="GeneID" id="66576722"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3547"/>
    <dbReference type="eggNOG" id="COG0472">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023982_0_0_9"/>
    <dbReference type="OMA" id="LMSPLHH"/>
    <dbReference type="OrthoDB" id="1151822at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008963">
        <property type="term" value="F:phospho-N-acetylmuramoyl-pentapeptide-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051992">
        <property type="term" value="F:UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06852">
        <property type="entry name" value="GT_MraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00038">
        <property type="entry name" value="MraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000715">
        <property type="entry name" value="Glycosyl_transferase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003524">
        <property type="entry name" value="PNAcMuramoyl-5peptid_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018480">
        <property type="entry name" value="PNAcMuramoyl-5peptid_Trfase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22926">
        <property type="entry name" value="PTHR22926"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00953">
        <property type="entry name" value="Glycos_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00445">
        <property type="entry name" value="mraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01347">
        <property type="entry name" value="MRAY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01348">
        <property type="entry name" value="MRAY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-0132">Cell division</keyword>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0133">Cell shape</keyword>
    <keyword evidence="7 8" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="78"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="114"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="177"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="200"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="225"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="250"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="298"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="34781" checksum="A170F52C4635DFCC" modified="2011-01-11" version="1">MDIQLLLLTIVVSFILAVIAAPLLIPLLRRMKFGQQVRDDGPQSHLKKIGTPTMGGIVILLAFTLTFLKFSAIKNTDFYVLLVATLGFGLIGFLDDYIKIVFKRSLGLTARQKLFGQLLFGAIMCWLLISNDHSTAIGIPGTSWSFDWGGWFYYPFIIIMMLAISNAVNFTDGLDGLLSGTSAIAFAAYAIVAIQATSLPAAVCAAAMIGAVLGFLVYNAHPAKVFMGDTGSLGIGGAIGAIAIVTKSEILFLIIGGVFVIEMLSVVLQVASFKTRGKRIFKMSPIHHHFELSGWSEWRVVITFWAVGLLLAGLGLYLNKGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L5</accession>
    <name>E3E8L5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yhdG</name>
        <name evidence="6" type="ORF">PPSC2_16875</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372147.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04210"/>
    <dbReference type="EnsemblBacteria" id="ADO57564">
        <property type="protein sequence ID" value="ADO57564"/>
        <property type="gene ID" value="PPSC2_16875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3603"/>
    <dbReference type="eggNOG" id="COG0531">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007946_15_7_9"/>
    <dbReference type="OMA" id="GWSMIMD"/>
    <dbReference type="OrthoDB" id="527053at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002293">
        <property type="entry name" value="AA/rel_permease1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004758">
        <property type="entry name" value="AA_transporter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13520">
        <property type="entry name" value="AA_permease_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00909">
        <property type="entry name" value="2A0306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="190"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="219"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="259"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="304"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="356"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="381"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="411"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="438"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="469" mass="50698" checksum="F8AB091BBE296E6B" modified="2011-01-11" version="1">MGNFLFRKKNIDQLIAATRGEKALKRELGAFDLTMLGIGAIIGTGIFVLTGTGAVTAGPGLVLSFVIAGLACLFAALAYAEFASTVPVSGSVYTFTYATMGELLAFIIGWDLILEYMLAASAVSAGWSGYFVSFLKGIGLHIPIEFTAAPGALKDQTTYFNLPAFLILMAITFLLYFGIKESKRINNIMVIVKIVVVLLFIIVAIKYVKPDNWTPFMPFGFSGVFGAAALVFFAFIGFDAVSSAAEETKNPARDLPRGIIFSLAICTLLYVIVSAIMTGIVPYMQFEGISHPVSLVLQVAGQNWVAGIVDIGAILGMTTVMLVMLYGQTRIMFAMSRDGLVPKVLSKVHSKYKTPYINTLFFGTLSALMGGLIPLDELASLVNIGTLSAFILISVAVIVMRKTQPDLPRAFRCPGVPFIPILAIISCGVLILNLNGQTFIRFIIWLVIGIAVYFLYSRKNSLLNQDSEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9I7</accession>
    <name>E3E9I7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosomal silencing factor RsfS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rsfS</name>
        <name evidence="3" type="synonym">yqeL</name>
        <name evidence="3" type="ORF">PPSC2_17120</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with ribosomal protein L14 (rplN).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the Iojap/RsfS family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372199.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04455"/>
    <dbReference type="EnsemblBacteria" id="ADO57618">
        <property type="protein sequence ID" value="ADO57618"/>
        <property type="gene ID" value="PPSC2_17120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3657"/>
    <dbReference type="eggNOG" id="COG0799">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092688_2_2_9"/>
    <dbReference type="OMA" id="VVHVFQK"/>
    <dbReference type="OrthoDB" id="1990650at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042256">
        <property type="term" value="P:mature ribosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090071">
        <property type="term" value="P:negative regulation of ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017148">
        <property type="term" value="P:negative regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01477">
        <property type="entry name" value="Iojap_RsfS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004394">
        <property type="entry name" value="Iojap/RsfS/C7orf30"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21043">
        <property type="entry name" value="PTHR21043"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00090">
        <property type="entry name" value="rsfS_iojap_ybeB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="2" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="13002" checksum="46C8CE0E66A3FB96" modified="2011-01-11" version="1">MTLTNEKLMQTAVEAANDKKAMNIVALDLRGVSLVADYFVICHGNSDTQVQAIVTEIRKRAHDEGVAIKGIEGMDSARWVLMDLGDVVVHVFHRDEREYYNIERLWSDAKVVEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9K2</accession>
    <name>E3E9K2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Expansin-YoaJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yoaJ</name>
        <name evidence="2" type="ORF">PPSC2_17195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372214.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04530"/>
    <dbReference type="CAZy" id="CBM63">
        <property type="family name" value="Carbohydrate-Binding Module Family 63"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57633">
        <property type="protein sequence ID" value="ADO57633"/>
        <property type="gene ID" value="PPSC2_17195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3672"/>
    <dbReference type="eggNOG" id="COG4305">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026963_1_1_9"/>
    <dbReference type="OMA" id="RNHKYPV"/>
    <dbReference type="OrthoDB" id="1420410at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036749">
        <property type="entry name" value="Expansin_CBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49590">
        <property type="entry name" value="SSF49590"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="SSF50685"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168269" evidence="1">
        <location>
            <begin position="31"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="25883" checksum="598E1D83C829FFC9" modified="2011-01-11" version="1">MREKSLFRKFKTIGLTSLLSVVLFALPASAAWNDTYTGYATYTGSGYSGGALLLDPIPSDAKITALNPTQLNYNGIKAALAGAYLEVQGPKGKTTVYVTDLYPEGPSGALDLSPNAFNLIGNQKDGKINISWKFVEAPVSGNVSYRIKEGSSQWWAAIQVRNHKYPVLKMEVQQNGQWLNLEKQDYNHFLGTNLGKQPLKIRITDIRGVVLNDTIPALAENGTGQAYIVKGNVQFPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9M2</accession>
    <name>E3E9M2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Fe-S oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_18035</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372392.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05355"/>
    <dbReference type="EnsemblBacteria" id="ADO57812">
        <property type="protein sequence ID" value="ADO57812"/>
        <property type="gene ID" value="PPSC2_18035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3854"/>
    <dbReference type="eggNOG" id="COG0535">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_4_0_9"/>
    <dbReference type="OMA" id="GWGRQFF"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017200">
        <property type="entry name" value="PqqE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037420">
        <property type="entry name" value="PQQ_syn_pqqE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="6">
        <location>
            <begin position="11"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="41388" checksum="43B77C6F5A5F9A8E" modified="2011-01-11" version="1">MISLQTPRDYRVDPFIVIWEVTRACALKCLHCRAEAQYKPDPRQLTFEEGKKLLDQIAEMNHPLVVFTGGDPLSRPDLFELAQYAIEEKKLSVSMTPSATPKVTRAAVEKAKQVGLSRWAFSLDGSCADIHDHFRGTVGSYNTTMRGIGYLKELNIPIQVNTTVSRYNLHDLERIAEKVKEMQAVLWSLFFLVPTGRGMEKDMITPDEHEAVMKWLYQIQQQMPYGVKATEAPHYRRVVLQEKHKAGQHSATFEQKRADILGRAPKGVNDGDGFVFISHIGEVYPSGFLPLTCGNVRKDSLAHIYRNSPIMNNLRDKSLLKGKCGVCEFNTVCGGSRARAFAITGDYLESDPYCAYMPGVGKETCAYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9U5</accession>
    <name>E3E9U5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372464.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3933"/>
    <dbReference type="EnsemblBacteria" id="ADO57885">
        <property type="protein sequence ID" value="ADO57885"/>
        <property type="gene ID" value="PPSC2_18370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3930"/>
    <dbReference type="eggNOG" id="ENOG50347XA">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1314419_0_0_9"/>
    <dbReference type="OMA" id="CRIACSE"/>
    <dbReference type="OrthoDB" id="1785480at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="209" mass="23867" checksum="6CE8E7D5A50916FE" modified="2011-01-11" version="1">MTEHWDEFFLKLHHQQVLKEQLSTAENDESWMMISIEEAIEGILKGSLTLTNEQEIRFQTLPVFENQVTISLPDSLAPEVRTGQTVDPSRSFVVQDKLGGILFGLHQSGQELDPTQIEVYQQQMIEQTSRAQPSMKLVDEKILSIQDTIIGCYEAIFLVSPSPYYQIVFVRSWRGKAMIGSCQFKLEDGPLWVPLTYAMLHTATWSELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA18</accession>
    <name>E3EA18_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yycF2</name>
        <name evidence="9" type="ORF">PPSC2_19650</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372723.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06870"/>
    <dbReference type="EnsemblBacteria" id="ADO58151">
        <property type="protein sequence ID" value="ADO58151"/>
        <property type="gene ID" value="PPSC2_19650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4190"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OMA" id="YHTELIY"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="128"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="128"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="26551" checksum="C70F806AB5B9C60A" modified="2011-01-11" version="1">MPTKILIIEGQKSLADMIALHLQEEGYHTELIYDCKLAIPTLMHFKPDIIVTALMFSGKVECELISHIRQFTTVPVLVISNNTLLNTRIKALDDGADDFLCKPFSLRELNARIKALLRRSGSNMLTETPTITQKLKKVRVWVNDYRHSLLVDDQEIEVTHIEFSIIKEMSCNPGKVFTRSELMDRVKGGDGAYLDRTIDVHISSLRKKIERDPKNPQHIRTVWGRGYKYEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA77</accession>
    <name>E3EA77_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372938.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07885"/>
    <dbReference type="EnsemblBacteria" id="ADO58369">
        <property type="protein sequence ID" value="ADO58369"/>
        <property type="gene ID" value="PPSC2_20635"/>
    </dbReference>
    <dbReference type="GeneID" id="66575930"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4402"/>
    <dbReference type="eggNOG" id="ENOG503320Z">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_181505_0_0_9"/>
    <dbReference type="OMA" id="CCHNKVT"/>
    <dbReference type="OrthoDB" id="1922125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="9102" checksum="984282B1BB1F9EFC" modified="2011-01-11" version="1">MIPFDKTWPYDIVMGDVYVQSCPFCNHDNVLLPLKPKELKLIHEGMKKLLVFPCCHNKVTLVDCDDDYLLSDTTLRHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA87</accession>
    <name>E3EA87_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iolS</name>
        <name evidence="2" type="ORF">PPSC2_20685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372948.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07930"/>
    <dbReference type="EnsemblBacteria" id="ADO58379">
        <property type="protein sequence ID" value="ADO58379"/>
        <property type="gene ID" value="PPSC2_20685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4412"/>
    <dbReference type="eggNOG" id="COG0667">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_3_9"/>
    <dbReference type="OMA" id="PPYSLFW"/>
    <dbReference type="OrthoDB" id="1054546at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018170">
        <property type="entry name" value="Aldo/ket_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00062">
        <property type="entry name" value="ALDOKETO_REDUCTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="16"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="34407" checksum="FAF3318B129A30AF" modified="2011-01-11" version="1">MAEQVRIGKTDLYVKPIGLGANKVGGHNLFSGLNNETGKEVVRTALDNGINFLDTAFIYGPEHSERLIGEVLKERGKREEAVIATKGAHKFVNGEVVFDNSPAFLRESVESSLKRLQTDYIDLFYIHFPDEATPKAEAVGELKKLKDEGKIKAIGVSNFTIEQLKDANSDGYVDVLQSHYNLLQREAEKDLLPYTKENGISFVPYFPLASGLLGGKYTKDMTFTDIRAKDPLFQGDAFARNLDKVEQVREIANALNAEVAHVVLAWYLTRDSIDALIPGAKGPEQVLANLKTLNVQLSQADIEKIDHIFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAG4</accession>
    <name>E3EAG4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Multidrug ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">msbA3</name>
        <name evidence="6" type="ORF">PPSC2_21720</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373149.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4635"/>
    <dbReference type="EnsemblBacteria" id="ADO58582">
        <property type="protein sequence ID" value="ADO58582"/>
        <property type="gene ID" value="PPSC2_21720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4622"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_873578_0_0_9"/>
    <dbReference type="OMA" id="HIFEKED"/>
    <dbReference type="OrthoDB" id="1827919at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="56"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="134"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="158"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="239"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="20"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="36275" checksum="E6A4A73F656F2341" modified="2011-01-11" version="1">MLRKYNWIFKEVHKFYLFIVLILVFQALDTILSMIIPQYISKIVDSGLVSKDLSLIVKFIGIATGLFILSHLCSLLCEFIFAELGKRISYAMKKKLLEKFFVLPGETITSNSDKLFSLFINDIGIIERLVSHGIPMLISNLLFLIVICIVLLFFNYKLFTLVLLIMLLTMISQIFFNKRITHKTKAVMNAYDDSISYIRHTLGSLLYSIGMDIKDYILGKYMPLEEKSLEAYRQRSNTIIVASTVPSVITSIGSVLLLGVGTILVMKGQTSMGVLTVFVYYSNQIISPIKSVTNYVATWKQTKVSIERIESIIRAEEVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAI6</accession>
    <name>E3EAI6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Leucine-rich repeat (Lrr) protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_21830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373171.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4657"/>
    <dbReference type="EnsemblBacteria" id="ADO58604">
        <property type="protein sequence ID" value="ADO58604"/>
        <property type="gene ID" value="PPSC2_21830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4644"/>
    <dbReference type="eggNOG" id="COG4886">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_787190_0_0_9"/>
    <dbReference type="OMA" id="NISAMVP"/>
    <dbReference type="OrthoDB" id="1455223at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="349" mass="40332" checksum="3F3D1B526826FAB3" modified="2011-01-11" version="1">MFRLYSDVRGTAYERLIDYAMERADTFMLGVHKWVTEDENGVADKDVLFEKLLQQLNPFLLSTNSYDAIRENHSIAYTPGTFYRYQCTPEAGKVLKQAASSLFSWVHPKLPEDLCFQNADGEDWIINIAHERIGRLNMDKEDADELEKLIPGVFIHKPEHHGNIDMFLNDAIRHQPDRVELMRFGLTEIPERIRELRSLKHLTIFEQDIRTLPSALFELKSLESLTIQVADLEELPADIAKLSRLKSLRVSCGCYDRPAPDYKVIPKEELSFRSVPPAIGELHQLEYLDISYSGIRTLPPEIQNLRSLRSLDIVNGLIESAPEFIYTMTWLDRFLIEDKPFHLCNHGDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAN2</accession>
    <name>E3EAN2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_22780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373329.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4849"/>
    <dbReference type="EnsemblBacteria" id="ADO58790">
        <property type="protein sequence ID" value="ADO58790"/>
        <property type="gene ID" value="PPSC2_22780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4823"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OMA" id="CVVENER"/>
    <dbReference type="OrthoDB" id="170593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="465" mass="54560" checksum="5EB559FE9724F000" modified="2011-01-11" version="1">MEHTPTIRSTIETELKQRGYTFSSFSKISGINRGTFSTMLNSNPPKPISVRQMDLITKALGYPEGWLYELYIDECFHEGKGHWKRIKPFLLRCVELGRKECIQRVLSRLTEDLSYVSTVFEFAEELHEGGKENEAVPFYECVIENERYYYSERLAISQYRLFCKSLNTDLDNNRQAAIKFAPFRRNLPDNYQLDALLKLANAYFQLDDCETVIQYAEELRVLATNIYQQQVREKLKSREVKPLNTERRLIVYYGQSFLLKGNAYEKQGLYQKALGFIPYYAELTGFEGLDDIGRIEAEKFKMWAKANKLSLEILMGKMDSLPAYVELLRNNPQEILHGLLTIVESANAYNYPIDEILILFAEKIDKFRELNTNISYYHTNYNLITYSRFFLELSRYYFNTGAYLKAMDAMLKSFKASSQLNDKAYYIKSITLLFEKYKDHSTNGQREEYEKLLEEVQHNVNQMIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAQ6</accession>
    <name>E3EAQ6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">PMT_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PPSC2_22875</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373352.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10350"/>
    <dbReference type="EnsemblBacteria" id="ADO58814">
        <property type="protein sequence ID" value="ADO58814"/>
        <property type="gene ID" value="PPSC2_22875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4844"/>
    <dbReference type="eggNOG" id="COG1807">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038353_0_0_9"/>
    <dbReference type="OMA" id="YKVEATW"/>
    <dbReference type="OrthoDB" id="806694at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038731">
        <property type="entry name" value="RgtA/B/C-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13231">
        <property type="entry name" value="PMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="87"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="166"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="190"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="229"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="297"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="320"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="347"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="377"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="domain" description="PMT_2" evidence="9">
        <location>
            <begin position="75"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF13231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="533" mass="60290" checksum="824F9A7D97663717" modified="2011-01-11" version="1">MIVRKHGKLLSLFACIAALELAVGVYFAWHLGYMHTDALSRVANAFYVLYSRDPHLGAIGFVWNPLPSLMELIVLLFYPLFPALASHGLAAVIVSSLFAGASAALLYGTGKELGLHGATSLLIALLFSLNPFMFLFGFNGLSDSPYIFFILLTVSRFCMWLKDRKAANLIVSGFALALAFWVRYEAVPLGVALALGVLLTIFSLHRWRTNRESVRTQLSLKERLYKVEATWLLLLLPLVFSGLLWLFFNWIIMGDPLYFLRSQYSNSTQSAALLEDQRFVEMFAHPVLMLKFVGQRTLWYAAPLIAILLIRLLDKRLWSWSTLTLLAIFLSVPGLQLLLMLKHSSFGWFRYFMYVFPITVAWLPYELSLLKGKMRGIGISLVTAGMLVTVSLLSYALTNPAIAADEHSYLTHSGNESYTRQIVERKIGSWLDEHYGSSLILTDSYTAYPIILSSKIPKKFMITSDYDFGKSLTDLPASKVDYVLVTRLVEGVPLDQVNRNYPDLFEKGAPWASLVHDFDGEWRLYKIEHEELQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB23</accession>
    <name>E3EB23_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Luciferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">luxA3</name>
        <name evidence="2" type="ORF">PPSC2_25100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373836.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5366"/>
    <dbReference type="EnsemblBacteria" id="ADO59303">
        <property type="protein sequence ID" value="ADO59303"/>
        <property type="gene ID" value="PPSC2_25100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5320"/>
    <dbReference type="eggNOG" id="COG2141">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027853_8_0_9"/>
    <dbReference type="OMA" id="AHPVGMH"/>
    <dbReference type="OrthoDB" id="1434838at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022290">
        <property type="entry name" value="CHP03858_lucif-like_mOase_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03858">
        <property type="entry name" value="LLM_2I7G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="353" mass="38924" checksum="8CD30383CF106B49" modified="2011-01-11" version="1">MEIGITSFVETKPDVQTGEVISHAQRLREVVEEIILADQVGLDVFGVGEHHRKDYSASSPAMVLSAAAAQTQRIRLTSAVTVLSSADPVRVFQDFATLDGISNGRAEIMAGRGSFIESFPLFGYDLDDYDELFEQHLELLLKIRESEKVIWKGGHRPAINNLGVYPRPVQNPLPIWVGSGGRQDSAIRAGLLGLPLMLAIIGGNPINFAPLVQLYKKAAAHAGHDESQLRVGSHSIGFVGENNEQAADTYFPSTMAGMNRLGRERGWAHYDRSSYDAARSFEGALYVGDPETVAQKIIHLRKHVGVTRFMLYVPLSTMPHAEVMRAIELLGTEVAPRVRKEIAKWEAETEKRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBG6</accession>
    <name>E3EBG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_22005</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58640.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886145.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09155"/>
    <dbReference type="EnsemblBacteria" id="ADO58640">
        <property type="protein sequence ID" value="ADO58640"/>
        <property type="gene ID" value="PPSC2_22005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4680"/>
    <dbReference type="eggNOG" id="COG0845">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_14_4_9"/>
    <dbReference type="OrthoDB" id="1200399at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168324" evidence="3">
        <location>
            <begin position="28"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="4">
        <location>
            <begin position="66"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="5">
        <location>
            <begin position="209"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="104"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58640.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="473" mass="49535" checksum="D640A803BE2DEACD" modified="2015-05-27" version="2">MKLKKKGIRIMITGIALAIVASGCSSATENSVTQASHPVKVEKLVMKPLANDFNLAGTLQASNEASVSFEADGRILNTMVEVGDSVEKGSVLAKLDTSVYQLQLDRAKATMEKAKAGLSQAEASVQSAQAGIHSSQSQVDAAQSKLQELNNGAKKQEIAQSQNAVTAATNAYNKKKADAARTQSLFQAGAASLSENENAQLELTNAQKSLSDAQEQLSLLLAGASQEQRAQASAGVEQARAGLETAMATKQQGLASKAQAQATYEDALAAYEQSSLSLKKATLTSPIAGVVIEKKVSDGQLGSSGSEAFVVGNIKTLKVLLPVPDSEILSWKKNQKVNISLYNEIRIGTVTQIYPSTNAKTGSINVEVSLPNPELDWKPGQVISASKSVNQAEALLVPVESVISTGSDPYIFKAVNGKAVKTTIKVGKVTNNQFEVLSGLQAGDQIVTQGAGTLFNGDLIGNDVLGKSEESSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM7</accession>
    <name>E3EBM7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HyaD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hyaD</name>
        <name evidence="2" type="ORF">PPSC2_23020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373383.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4905"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58845">
        <property type="protein sequence ID" value="ADO58845"/>
        <property type="gene ID" value="PPSC2_23020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4876"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0463">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_282527_0_0_9"/>
    <dbReference type="OMA" id="EYTLKTC"/>
    <dbReference type="OrthoDB" id="1456713at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="556"/>
            <end position="642"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="942" mass="107782" checksum="919EFDB00434A038" modified="2011-01-11" version="1">MSNNKEMEQQKKIFKENIELLINNGEIEQSKDLIRQFETLAPYDADIWSMKAIILFIEGKYDEAEDLLWKGVDLDNKNKDILYNLGYLYEVRGEFRTAINLYWMVMKITDDFQQISSIKSTIKKLKMMDDTTEKKFIVLGSREWSEVMNRPQLIAQSLSRLAFQVEYIQPLIDVSIERPTLENSEMMKYSQHNMRRLGFLNVHIPISVYHNGGFLSDNYLDMIQGLIDLSDEEIVIICCLPAHATVLNKLTGSFKIIYDCPDEEELETLYIKKKNNIEDHAVLLEKSNIITTNDAGSFLVNRLGIYKNVYLIENGDNSENDRENNIFSGKALSLNSWSSKSKELLSMINGHADNLEIGIIRERYEGLLKNKPNPTLSSLYALTFAGTETDKFYGLAKRAYDELQTASTLKNYIFASVEANRINECAETIINDSKLTEIDKAEIEFLIRNDRSNLLKSRLLHIAKWFRELRNMISELEKGDLFEYNYILGNYYYENGYYNQSIMIYDKLLNHNNNILNSSPTLYHNMANSLIEEGRIIESRKYAKKVTMSQEHLKFSIVIPTRNNHMTLEYTLKTCLDQEFDNYEIVVSDNSSNDSTCNLVASINNDKIKYFRTEQELAMTENFNFAISKAKGEYIIVLGSDDGLLLHALSTLDILLDTLDTKILKWDYVFYGWPDVKLGGVENYFNIPKTITGSINRTVIKSKDIINNVVDFNIPYNSLPMLYCNAVVHRDLIDKLKTITGTVFAGTIPDVYSGFALACIQEHFIAVDVPMSIGGASGKSNGIAVLHGNKDKESKGIQKDFNKLNNKLGATRFKIVPDIPNVVAPIAESFLNVKQLLGDFSADYILNRQKMIQICVESLDVTDKDFQKHLQIIYSSLEDDQGLKEWFVKNYIEKSGFGRSGKTPMKFQKGFTYNGGLTLDLSDFNVTDVYGAANIFRKITGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ2</accession>
    <name>E3EBQ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sasp3</name>
        <name evidence="4" type="ORF">PPSC2_23130</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the alpha/beta-type SASP family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373408.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10615"/>
    <dbReference type="EnsemblBacteria" id="ADO58870">
        <property type="protein sequence ID" value="ADO58870"/>
        <property type="gene ID" value="PPSC2_23130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4899"/>
    <dbReference type="eggNOG" id="ENOG5033DZ2">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_169738_2_1_9"/>
    <dbReference type="OMA" id="PQYAHIH"/>
    <dbReference type="OrthoDB" id="2064087at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.10.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001448">
        <property type="entry name" value="SASP_alpha/beta-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018126">
        <property type="entry name" value="SASP_alpha/beta-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038300">
        <property type="entry name" value="SASP_sf_alpha/beta"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00269">
        <property type="entry name" value="SASP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00304">
        <property type="entry name" value="SASP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00684">
        <property type="entry name" value="SASP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0749">Sporulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="10794" checksum="1880C39590C14190" modified="2011-01-11" version="1">MASRGQRRLIPESRARLDDLKYEIAAEFGLPVYNPQYAHIHPNADSEFAAELGEFTRSQNVAWRDLTSRQNGSVGGEITKRLIQSAERSLSEFGTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBT4</accession>
    <name>E3EBT4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">ATP-dependent helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">uvrB3</name>
        <name evidence="9" type="ORF">PPSC2_24015</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373593.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11520"/>
    <dbReference type="EnsemblBacteria" id="ADO59058">
        <property type="protein sequence ID" value="ADO59058"/>
        <property type="gene ID" value="PPSC2_24015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5081"/>
    <dbReference type="eggNOG" id="COG1199">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006515_7_0_9"/>
    <dbReference type="OMA" id="QVNPVNE"/>
    <dbReference type="OrthoDB" id="679382at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016818">
        <property type="term" value="F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006555">
        <property type="entry name" value="ATP-dep_Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010614">
        <property type="entry name" value="DEAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045028">
        <property type="entry name" value="DinG/Rad3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014013">
        <property type="entry name" value="Helic_SF1/SF2_ATP-bd_DinG/Rad3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006554">
        <property type="entry name" value="Helicase-like_DEXD_c2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011604">
        <property type="entry name" value="PDDEXK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038726">
        <property type="entry name" value="PDDEXK_AddAB-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042493">
        <property type="entry name" value="XPD_DNA_FeS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472">
        <property type="entry name" value="PTHR11472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06733">
        <property type="entry name" value="DEAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13307">
        <property type="entry name" value="Helicase_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12705">
        <property type="entry name" value="PDDEXK_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00488">
        <property type="entry name" value="DEXDc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00491">
        <property type="entry name" value="HELICc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51193">
        <property type="entry name" value="HELICASE_ATP_BIND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="8">
        <location>
            <begin position="188"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="210"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="790" mass="89467" checksum="2337FA5C2F31E7FC" modified="2011-01-11" version="1">MTGTGDRMKEPIHISVRPLVEYVHRSGSIQSGFRSNSSMQEGTRVHQVIQKGYKEHDRKEVHLRTEISYEGKLFIIEGRCDGLIELDGVWTVDEIKSISQPLEDIQGDGHPVHWAQAFLYAYMIAREEQHHSMQVQLTYVQSHSEDIRRFRRMLSFAELEAFTQEMIAGYAPYAFLLRAHAEKRDASIAILDFPFDTYRSGQRTLAGSVYKTIAEGVNLFAKAPTGIGKTVSTLYPAIKAIGEGLARRVYYVTARTTTRAAAEEAYARMQAQGLHMHVVTLTAKDKICFKDEHDCDAGSCSMCEGYYDRINGAVSDILANETLMTRAVIEHYARKHKVCPFEFSLDVAYASDGIISDYNYVFDPRISLKRLLEEHKRKGVVLVDEAHNLVERGRDMFSAEILKSSFLELKREFKLLSPEVAKTASAVNAHMITLRKLHADTGKAVETAAPQEVLELLVPFVEAAERELVMGNSTSRASSESTAYALLLDTYFTAQNMLRIAALYDERYVTYSEAGRSEVRIKLFCLDPSHLLGQAVKNYRSTIYFSATLTPLAYYRDMLGASEEDYTLQVPSPFHQEQWDVRLLPLSIRYRDRERSKGAIADMLAGLVAERKGNVLVFFPSYPYLREVYEEFMLRDVSADTLVQSPGMTEPERDRFLEAFQPGQERTLLGFAVLGGVFAEGVDLPGDRLNGVVVVGVGLPQIGAERDVLRDYFSEQGRNGFNYAYVYPGMNKVLQAGGRLIRTEHDEGLLVLVDDRFAKEPYASLLPDEWKSYRLMEQAGLRKEWMDYEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBU5</accession>
    <name>E3EBU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_24060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373604.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11565"/>
    <dbReference type="EnsemblBacteria" id="ADO59069">
        <property type="protein sequence ID" value="ADO59069"/>
        <property type="gene ID" value="PPSC2_24060"/>
    </dbReference>
    <dbReference type="GeneID" id="66575260"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5092"/>
    <dbReference type="eggNOG" id="COG0657">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012494_6_0_9"/>
    <dbReference type="OMA" id="HTFPTAW"/>
    <dbReference type="OrthoDB" id="1361074at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013094">
        <property type="entry name" value="AB_hydrolase_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07859">
        <property type="entry name" value="Abhydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Abhydrolase_3" evidence="2">
        <location>
            <begin position="81"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="317" mass="34608" checksum="9830676D801BC08B" modified="2011-01-11" version="1">MSKKVQLEPAAQKFADDNAKPPFLYDLGPEKGRETVNEVQSGPADKPAADLEDLSIPGGPGGEVKVKIVRPQQVTGDLPVIVYIHGAGWVFGNAHTHDRLIRELAVGSQAAVVFPEYSLSPEAKYPTAIEEIYAVVQWVAQHGREHGLKPDTLTIAGDSVGGNMTAAVTLLAKERSGPTIRQQLLFYPVTDASFDTESYHEFATGYFLSREGMQWFWDQYTTDPNERAQITASPLRATTDQLKGLPRALVITGEADVLRDEGEAYANKLREAGVDVTAARFQGIIHDFVMLNPLSETAAKRGAIMLATSWLRQGFEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC08</accession>
    <name>E3EC08_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cellulase</fullName>
            <ecNumber evidence="2">3.2.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">celC</name>
        <name evidence="13" type="ORF">PPSC2_25305</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373881.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EC08"/>
    <dbReference type="STRING" id="1406.LK13_12800"/>
    <dbReference type="CAZy" id="CBM46">
        <property type="family name" value="Carbohydrate-Binding Module Family 46"/>
    </dbReference>
    <dbReference type="CAZy" id="GH5">
        <property type="family name" value="Glycoside Hydrolase Family 5"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59348">
        <property type="protein sequence ID" value="ADO59348"/>
        <property type="gene ID" value="PPSC2_25305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5365"/>
    <dbReference type="eggNOG" id="COG2730">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018668_0_1_9"/>
    <dbReference type="OMA" id="LVDDWTQ"/>
    <dbReference type="OrthoDB" id="1395441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005102">
        <property type="entry name" value="Carbo-bd_X2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040946">
        <property type="entry name" value="CBM46"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018087">
        <property type="entry name" value="Glyco_hydro_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016282">
        <property type="entry name" value="Glyco_hydro_5_endoGlcnase_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18448">
        <property type="entry name" value="CBM46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03442">
        <property type="entry name" value="CBM_X2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001043">
        <property type="entry name" value="Endoglucanase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00659">
        <property type="entry name" value="GLYCOSYL_HYDROL_F5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="6 8" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168803" description="Cellulase" evidence="9">
        <location>
            <begin position="30"/>
            <end position="573"/>
        </location>
    </feature>
    <feature type="domain" description="Cellulase" evidence="10">
        <location>
            <begin position="69"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="CBM_X2" evidence="11">
        <location>
            <begin position="384"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="domain" description="CBM46" evidence="12">
        <location>
            <begin position="468"/>
            <end position="570"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF18448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO59348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="573" mass="63431" checksum="73FE9C7B1025C481" modified="2011-01-11" version="1">MLKRRPISLLSLTLAITLLLSTFASVAAAAETDGQAQPAAAIGNMQSYVEAMQPGWNLGNSLDAVGADETAWGNPRITQALIQQIAAQGYKSIRIPVTWDKHIGAAPNYTVESAYMNRVEEVVRWALDANLYVMINVHHDSWTWVSSMEPKHDEVLARYNALWTQIADRFKDQSHKLMFESINEPRFSEGGTTDEAKMNQMLHELNVSFHKIVRASGGKNATRPLVLSGLDTSPAQAKISQLYNTITGLNDPNLIATVHYYGFWPFSVNIAGNTTFDKVAQDDIIQTFDNVYNTFVAKGIPVIVGEYGLLGFDKHTGVIEQGEKLKFFEFVTHYMKEKKVTGMLWDNGQHLNRTTYKWSDPELFNVIKASLKGRSSNAASDLIHLKKGSPVQETKVTLNLNGNQLKSLHANSKQLKQGTDYTLSGDTLTFKASLLTSLITSGKYGENAVMTAKFNKGADWNFRVVVYDTPKLSAVEGTTQAFTIPTDFRGSQLATMEAVYTNGGNAGPQDWTPYKEFGNTFAPAYDTHGIKLLPEFFNSVKDGEVTLKFHFWSGDVVTYKITKSGTRVTGVTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC98</accession>
    <name>E3EC98_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-390</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-390</name>
        <name evidence="1" type="ORF">PPSC2_01265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368883.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0255"/>
    <dbReference type="EnsemblBacteria" id="ADO54241">
        <property type="protein sequence ID" value="ADO54241"/>
        <property type="gene ID" value="PPSC2_01265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.249"/>
    <dbReference type="eggNOG" id="ENOG50339FB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112340_0_0_9"/>
    <dbReference type="OMA" id="EFIIMEL"/>
    <dbReference type="OrthoDB" id="1455057at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="25228" checksum="43AB8325D7576D30" modified="2011-01-11" version="1">MNYMDEHILSLKNKLNYDVASNNVNTSLSQTVISEQDHSVSEKSLALRLGDELIPLELRVILDGQMQVSVPKSFSLMPLEQAKFKYPSEYRPEAIYTSEDGTVNITFSRTESFLADEELPDFVEQMADTLRAVQPIRNWLGTQVIVNHSGLSIRLIRFVAAGVDTNLYNEILLFTHAGQVMMGTFNCMESDMEAWLPVAENTVHSLHAVSLLLHPTLEKEANQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECE3</accession>
    <name>E3ECE3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ywqA</name>
        <name evidence="3" type="ORF">PPSC2_01490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368928.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14185"/>
    <dbReference type="EnsemblBacteria" id="ADO54286">
        <property type="protein sequence ID" value="ADO54286"/>
        <property type="gene ID" value="PPSC2_01490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.295"/>
    <dbReference type="eggNOG" id="COG0553">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000315_21_8_9"/>
    <dbReference type="OMA" id="TQYIQMG"/>
    <dbReference type="OrthoDB" id="325071at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140658">
        <property type="term" value="F:ATP-dependent chromatin remodeler activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022138">
        <property type="entry name" value="Helicase_SWF/SNF-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12419">
        <property type="entry name" value="DUF3670"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="505"/>
            <end position="671"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="808"/>
            <end position="972"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="987" mass="111637" checksum="B56199DCA744DE07" modified="2011-01-11" version="1">MSQYTETITVHIQLTTYGDALIYGDSSMNYSISGQMLKQRLFAWHEASFYGTELEIQHVQDTDIIVLPSEQVIPFLAEQELLQHIEWIWDEANAPWLRLIPLLAHCIETKAYVPNFTSFQAGKLQWKWDAEALENIQPAELALLDNLDENEREGLVAAFSAAVFQRWYGTEAEAADLRREYPVLFAPNRQAAAGLDAQVWLIAIGWKADTAPFRPLLQLLEPELEDDEPSWKLKLVLQDKQDPALLVPVQLADDGYASGSWPDAWTVHVRERSGGWLERLTAILPAGQRAGSRDGILSRPLSDEAAWQFLTTDSQRLLESGWQVLLPAWWEAATRKKPKLRAKVRPGEGAGERSKGSSLFGLDSIVQFDWRVAIGDADLSESEFAELVARNERLVRFRGQWIALDPALLAQIRRAMDGIDSAQGLSFQDILQLHLLGNTDEPEGDASGEQPEDPARFRLEVELNAHLLKLISQLGRQSEWPALDVPDGLQAELRTYQRDGYAWLAFLRRFGLGACLADDMGLGKTVQFITYLLHLQEIAAETGVRSSSLLICPTSVLGNWQKELSRFAPSLRVMLHYGSKREQGDLFREKVEQADVILTSFATATLDQELLQSMTWDSICLDEAQNIKNAQTKQSTAVRSFPARHRIALTGTPIENRLSELWSIYDFINPGYLGSSRAFSNRFMNAIEKEHNEHRTMDLQKLVQPFMLRRKKKDPAIQLDLPDKNEMKTYIHLTSEQGALYDQIVKELMERMQKLEGIERKGAILSALTQLKQLCDHPALLTKGALLDAAASGYSQPDLEAVISRSSKLERILAMVKELREEGERCLIFTQYIGMGQMLQQVLAQELQEPVLYLNGSTSKSARDRMIDQFQSHTLSPDEQPSVFILSLKAGGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTKDVQVHKFISLGTLEERIDEMLESKQQLSDQIITSTEGWITELSTDALKDLFTLRREWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECN9</accession>
    <name>E3ECN9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">M1-959</name>
        <name evidence="7" type="ORF">PPSC2_04105</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369446.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16905"/>
    <dbReference type="EnsemblBacteria" id="ADO54811">
        <property type="protein sequence ID" value="ADO54811"/>
        <property type="gene ID" value="PPSC2_04105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.818"/>
    <dbReference type="eggNOG" id="COG0531">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_1_2_9"/>
    <dbReference type="OMA" id="WNTYINT"/>
    <dbReference type="OrthoDB" id="842200at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="187"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="220"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="271"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="307"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="339"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="371" mass="41697" checksum="BABF414F472CBCF0" modified="2011-01-11" version="1">MSKKARISVRQVTVLMFMSLIGDMLLIYPTMITHIAHQDAWISSILSIPLGLIIIYVLIRVHELHPNLTLIEAIRKIMGPVLGTVVSCWYLFYFLMNTALIAREVGDFLTTQLLVHTPLRVLLAMGIFLMVLTALMGIEAFGRVSEMLLPAYILIFSGLILALLPQVQLSNVRPVLENGLAPVAKGMVPGVAMPFAGMSIMLMVFPYVNKKAHFKKDMLLASLIGGIVISLFLLLSLLVIGPFVTNYSPYISSVLTTKINELNYITRVESLVALTWALAAYFKGVLFFYAFTFGTPQLFRISNSRPFVIPAGAIVFGMTILITPNVFYYVRTLVYPMAAWHYTNGLFIPLLLWVVYLCRRKWKQRQNISTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECR0</accession>
    <name>E3ECR0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Muscle M-line assembly protein unc-89 Uncoordinated protein 89</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-506</name>
        <name evidence="2" type="ORF">PPSC2_01805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368994.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54354">
        <property type="protein sequence ID" value="ADO54354"/>
        <property type="gene ID" value="PPSC2_01805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.363"/>
    <dbReference type="eggNOG" id="ENOG50343Z3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1045241_0_0_9"/>
    <dbReference type="OMA" id="MERRSDY"/>
    <dbReference type="OrthoDB" id="1631870at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="103"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="29651" checksum="8DE8DB1442B2C518" modified="2011-01-11" version="1">MNVSFTSSHQSSFHTTDNNRLELRHPLSPQAERKSIGKPQNKIIKQLIEQKQNLMERRSDYISNALKRGLGSEAVKAEMEKIDKQIQQIDENIQKQSIEEQKKAFGMDEESKKEAQEDKKEQYTHKTAEEQKQSLMTYTMHSIVSANNQLKNSKITKRAQITLESEAKGWENTNPSRSTTLREKAEGLNGKIMEIASNINECIRKAVNEEATIIDRDESKDEKESSIEVGRVWTEQEINAYVDSAKDEAKNAGVKINIAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECV8</accession>
    <name>E3ECV8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="13">L-asparaginase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ansB</name>
        <name evidence="13" type="ORF">PPSC2_04190</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the asparaginase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369462.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3ECV8"/>
    <dbReference type="STRING" id="1406.LK13_17010"/>
    <dbReference type="EnsemblBacteria" id="ADO54827">
        <property type="protein sequence ID" value="ADO54827"/>
        <property type="gene ID" value="PPSC2_04190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.833"/>
    <dbReference type="eggNOG" id="COG0252">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019134_1_2_9"/>
    <dbReference type="OMA" id="DESPYFL"/>
    <dbReference type="OrthoDB" id="1659551at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004067">
        <property type="term" value="F:asparaginase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006528">
        <property type="term" value="P:asparagine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08964">
        <property type="entry name" value="L-asparaginase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004550">
        <property type="entry name" value="AsnASE_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036152">
        <property type="entry name" value="Asp/glu_Ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006034">
        <property type="entry name" value="Asparaginase/glutaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020827">
        <property type="entry name" value="Asparaginase/glutaminase_AS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027475">
        <property type="entry name" value="Asparaginase/glutaminase_AS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040919">
        <property type="entry name" value="Asparaginase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027473">
        <property type="entry name" value="L-asparaginase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027474">
        <property type="entry name" value="L-asparaginase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037152">
        <property type="entry name" value="L-asparaginase_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00710">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17763">
        <property type="entry name" value="Asparaginase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001220">
        <property type="entry name" value="L-ASNase_gatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00139">
        <property type="entry name" value="ASNGLNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00870">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53774">
        <property type="entry name" value="SSF53774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00520">
        <property type="entry name" value="asnASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00144">
        <property type="entry name" value="ASN_GLN_ASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00917">
        <property type="entry name" value="ASN_GLN_ASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51732">
        <property type="entry name" value="ASN_GLN_ASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168144" evidence="10">
        <location>
            <begin position="35"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="Asparaginase" evidence="11">
        <location>
            <begin position="62"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="Asparaginase_C" evidence="12">
        <location>
            <begin position="275"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="151"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="5">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="active site" description="O-isoaspartyl threonine intermediate" evidence="3">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001220-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR001220-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR604550-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF17763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="40428" checksum="EFD22A37EC5429A7" modified="2011-01-11" version="1">MTNMKKMTMIPLLASFILGSTLWSGGVTANVASAATTSTTLSTSSTTTLDKSDKPQTNHLPNIKILATGGTIAGSSSVNTDTTGYKAGALGVETLINAVPEMKSIANVSGEQVVNVGSPDVNNEILLKLAKRTNELLARDDVDGIVITHGTDTLEETAYFLNLVVKSDKPVVVVGSMRPATAISADGPFNLYNAVKVAGASASKGQGVLVLLNDRIGAARYITKTNTTAVDTFKSVEQGYLGAVVGDQVYYYNKSTHKHTTSSVFDISNLTQLPQVDILYEYQNNGRYLYDAAVAAGAKGIVVAGSGNGSLSKTSSEGAEAAGKKGVIIARSTRVGSGVVSPSTKDAASNFVSTDSLNPQKARILLMLALTQTHDVNQIQSFFNEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED82</accession>
    <name>E3ED82_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Nitrate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ytlD1</name>
        <name evidence="7" type="ORF">PPSC2_02350</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369079.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15115"/>
    <dbReference type="EnsemblBacteria" id="ADO54439">
        <property type="protein sequence ID" value="ADO54439"/>
        <property type="gene ID" value="PPSC2_02350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.448"/>
    <dbReference type="eggNOG" id="COG0600">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046113_2_1_9"/>
    <dbReference type="OMA" id="MSWIFAS"/>
    <dbReference type="OrthoDB" id="916788at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="224"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="63"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="28502" checksum="D2AB03089656743B" modified="2011-01-11" version="1">MNPKGKNVSWWKSVWPPLVAVLFFLAAWQGAVNYLHIESWLLPAPSLIVQEGMAQSALLGTHTWATVRLTLAGFAIGTATGLLIAIVLHTIPFLKSALYPLLILSQNIPIIALGPLLMVWFGFGVLPKLMVITLVCFFPVAVAAMDGLTRTDRMMMNYMRMSGASRRAIFLKLELPHSLPQVFSGVKIAATYSVMGAIIAEWIGASEGIGYYMLLQKSAYRTDLIFAAIGIIVALSLLMFVVILLLEKWLVRWKPDQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED89</accession>
    <name>E3ED89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Signal peptide protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-600</name>
        <name evidence="2" type="ORF">PPSC2_02375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369086.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15140"/>
    <dbReference type="EnsemblBacteria" id="ADO54446">
        <property type="protein sequence ID" value="ADO54446"/>
        <property type="gene ID" value="PPSC2_02375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.456"/>
    <dbReference type="eggNOG" id="COG2200">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_70_0_9"/>
    <dbReference type="OMA" id="PELCIRS"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EAL" evidence="1">
        <location>
            <begin position="103"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="353" mass="40132" checksum="5F25E6B14C7E6887" modified="2011-01-11" version="1">MTCSNCSIILPIKDQGLLKIRHSRVSLTPALEGLGMLSEQMKQEHWCEGNIVFRYDSRSQLEHLVNGLARLPQECLSRMQVVVTGLQHVEGFEEWLLFGQLQARLQHPDLVSIINNQNFTSHMQPIVDYKLNIIGFEFLLRSSQPDKSFQPFRLFEVAREAGLHAHLDRSARISAIEKSATCLPVGIKRFINFLPSTIYNPAYCLNHTFETIERLSMNTEDFVFEVVETEEIDDLNFLHQIFEQYRTRGVSVALDDVGAGYSTTELMNCLQPDYVKIDRSIIDGCHHNSDQKRQITGIVESAFRFGGQVLAEGVEQMEDFEFCRNAGVSLAQGYLFGKPEPTPPSNFILSRVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDG7</accession>
    <name>E3EDG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNase TatD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">mttC</name>
        <name evidence="1" type="ORF">PPSC2_04725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369579.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17620"/>
    <dbReference type="EnsemblBacteria" id="ADO54946">
        <property type="protein sequence ID" value="ADO54946"/>
        <property type="gene ID" value="PPSC2_04725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.949"/>
    <dbReference type="eggNOG" id="COG0084">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031506_1_2_9"/>
    <dbReference type="OMA" id="NEPCALP"/>
    <dbReference type="OrthoDB" id="915852at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004536">
        <property type="term" value="F:deoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01310">
        <property type="entry name" value="TatD_DNAse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018228">
        <property type="entry name" value="DNase_TatD-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015991">
        <property type="entry name" value="Hydrolase_TatD-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001130">
        <property type="entry name" value="TatD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01026">
        <property type="entry name" value="TatD_DNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005902">
        <property type="entry name" value="DNase_TatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00010">
        <property type="entry name" value="TIGR00010"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01090">
        <property type="entry name" value="TATD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01091">
        <property type="entry name" value="TATD_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="265" mass="29956" checksum="FA830E249498E7B4" modified="2011-01-11" version="1">MDRSTPLIDIGVNLMHRSFHADREQVVERAAAVGITPLIITGTSVRSSREAAQYAARYPGQLYATAGVHPHDAKNCSTDTIQQLRQLAVQPQVVSIGECGLDYNRDFSPRDVQRRWFGEQIQLAGELHMPLFLHERDAHEDFVAMLREHQELVDKAVVHCFTGTAQELHTYVEMGLYIGITGWICDERRGKHLRELVRDIPLDRLMIETDAPFLTPRNLPVKPKEGRNEPVYLAHIAATIAECTGRSMMEIEIATTETAKRFFGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDJ7</accession>
    <name>E3EDJ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Urease accessory protein UreF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ureF</name>
        <name evidence="3" type="ORF">PPSC2_06385</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369936.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19330"/>
    <dbReference type="EnsemblBacteria" id="ADO55305">
        <property type="protein sequence ID" value="ADO55305"/>
        <property type="gene ID" value="PPSC2_06385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1315"/>
    <dbReference type="eggNOG" id="COG0830">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1179300_0_0_9"/>
    <dbReference type="OMA" id="IQQNDGW"/>
    <dbReference type="OrthoDB" id="1942614at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.4190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002639">
        <property type="entry name" value="UreF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038277">
        <property type="entry name" value="UreF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01730">
        <property type="entry name" value="UreF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1" id="KW-0996">Nickel insertion</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="28256" checksum="4DFEEE1115469615" modified="2011-01-11" version="1">MLNYALLLDPSLPIGGFTRFYGLDERFRNGNLNSLQDLKHFMRDDWYPQITTLDGMAIKSLYAAIQQNDGWRIALIDKMLYTQHPSSQYVKKSRLSGQRLLKLTKALYPWLAFDQLEDTLTQYNAIGTLATVHTWINFLLGTDIEQTIHGYFATAVSFCIEDAFRLLNPPYEEKNPLIDHMTSELLTTWKKFNEPTPSLFQPHLFHSHQTSSYITQPPYMSHSSQLNASRPFSSSILFKRLPASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDL1</accession>
    <name>E3EDL1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Thiol-disulfide oxidoreductase DCC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yuxK</name>
        <name evidence="1" type="ORF">PPSC2_06450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55319.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599553.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19415"/>
    <dbReference type="EnsemblBacteria" id="ADO55319">
        <property type="protein sequence ID" value="ADO55319"/>
        <property type="gene ID" value="PPSC2_06450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1329"/>
    <dbReference type="eggNOG" id="COG3011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092206_2_1_9"/>
    <dbReference type="OMA" id="ARNRYKW"/>
    <dbReference type="OrthoDB" id="2019103at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007263">
        <property type="entry name" value="DCC1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04134">
        <property type="entry name" value="DCC1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55319.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16418" checksum="64D07C46046B2BC0" modified="2015-05-27" version="2">MNQSDHVHTEHSIVLVDGVCHFCQGATRFIIKRDPKGIFHFGSLQSEVGQELLRAGGLSTDQLDTLVLLEDGTYYTRSTAALRIAKRLRFPYPLAYVFILIPRFVRNAAYNWVARNRYRWFGKDEEDQCQIPPPEIRKRFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDN2</accession>
    <name>E3EDN2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Formyltetrahydrofolate deformylase</fullName>
            <ecNumber evidence="3">3.5.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Formyl-FH(4) hydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">purU</name>
        <name evidence="5" type="ORF">PPSC2_06550</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(6S)-10-formyltetrahydrofolate + H2O = (6S)-5,6,7,8-tetrahydrofolate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19833"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="EC" id="3.5.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; IMP biosynthesis via de novo pathway; formate from 10-formyl-5,6,7,8-tetrahydrofolate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PurU family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.10" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369971.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19515"/>
    <dbReference type="EnsemblBacteria" id="ADO55340">
        <property type="protein sequence ID" value="ADO55340"/>
        <property type="gene ID" value="PPSC2_06550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1349"/>
    <dbReference type="eggNOG" id="COG0788">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038395_3_0_9"/>
    <dbReference type="OMA" id="HADHHTD"/>
    <dbReference type="OrthoDB" id="979667at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00170"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008864">
        <property type="term" value="F:formyltetrahydrofolate deformylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016742">
        <property type="term" value="F:hydroxymethyl-, formyl- and related transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04875">
        <property type="entry name" value="ACT_F4HF-DF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08648">
        <property type="entry name" value="FMT_core_Formyl-FH4-Hydrolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01927">
        <property type="entry name" value="PurU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041729">
        <property type="entry name" value="Formyl-FH4-Hydrolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004810">
        <property type="entry name" value="PurU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044074">
        <property type="entry name" value="PurU_ACT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42706">
        <property type="entry name" value="PTHR42706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01575">
        <property type="entry name" value="FFH4HYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00655">
        <property type="entry name" value="PurU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="3" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT" evidence="4">
        <location>
            <begin position="21"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="34092" checksum="E361B5CECD7072EF" modified="2011-01-11" version="1">MELHVKHQPNSTVSTHENRARMLVSCPDGPGIVATVSRFLYEHGANIVQSDQYTMDPSGGMFFMRIEFDLPNLSAAQSQLEQDFVAVAEQFRMEWTISAVSRKKKLAIFVSKEDHCLVELLWQWQAGDLDADIALVVSNHPDMKEYVESFGIPYHHIPVTADTKPEAERRQLEVIGEEIDVIILARYMQIISPKFIEHYRNRIINIHHSFLPAFVGGKPYAQAYNRGVKIIGATAHYVTEELDGGPIIEQDVQRVSHGDDVNELKRIGRTIERVVLARAVKWHTEDRILVHENKTVVFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDR0</accession>
    <name>E3EDR0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">PTS beta-glucoside transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">bglP2</name>
        <name evidence="16" type="ORF">PPSC2_06685</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369999.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1389"/>
    <dbReference type="EnsemblBacteria" id="ADO55368">
        <property type="protein sequence ID" value="ADO55368"/>
        <property type="gene ID" value="PPSC2_06685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1376"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_2_3_9"/>
    <dbReference type="OMA" id="IIMTGMH"/>
    <dbReference type="OrthoDB" id="328780at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036878">
        <property type="entry name" value="Glu_permease_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018113">
        <property type="entry name" value="PTrfase_EIIB_Cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001127">
        <property type="entry name" value="PTS_EIIA_1_perm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011297">
        <property type="entry name" value="PTS_IIABC_b_glu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001996">
        <property type="entry name" value="PTS_IIB_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00358">
        <property type="entry name" value="PTS_EIIA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00367">
        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55604">
        <property type="entry name" value="SSF55604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00830">
        <property type="entry name" value="PTBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01995">
        <property type="entry name" value="PTS-II-ABC-beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51093">
        <property type="entry name" value="PTS_EIIA_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00371">
        <property type="entry name" value="PTS_EIIA_TYPE_1_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51098">
        <property type="entry name" value="PTS_EIIB_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01035">
        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="104"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="145"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="207"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="241"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="286"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="355"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="386"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="422"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="14">
        <location>
            <begin position="4"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="15">
        <location>
            <begin position="106"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-1" evidence="13">
        <location>
            <begin position="501"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO55368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="633" mass="66826" checksum="6457F70E537CC67F" modified="2011-01-11" version="1">MDRNQLSKEILTLVGGEENVEQVIHCMTRLRFNLHNDKKAQKEQLQKTDGVMGVMESGGQFQVIIGNDVANVYKSLVSNMSKAPQSETGASTASKKKQNPISQLFDFIAGMFTPILPAITGAGMIKGIIALLVAMHWMSDKSQTYTILAAIGDGAFYFLPIILAVSAARKLGSNMFIGAAIGASILHPDITALLASNVKVSFIGLPVTAATYSSTVIPIVIAIWLASYVEKFIDKYTHASLKLLVVPTLTLLIIVPLTLVAVGPLGSIIGNGLSGGISWLFENTGALAGLLLGGTFSLIIMTGMHYALVPIMIGSIATLGYDYMIPIMGAANLAQAGATLGVFLKSKNAKVKTVAFSTSLTAIMGVTEPAMYGVNMRFKKPFTAALIGGAVGGGFMSLFGTKAYVVGGLVGLPGLAMFIGPTFLYAILGLIIAFVVATIVTYVIGFTDEKNEEAPQVANATGGISTKGVAQSAVSSLPKGETIPVFSPIMGEVKPLSEVNDPAFSQEIMGRGWAIEPSEGRVVSPVDGTVFSISKSGHAVGLVSDSGLEMLIHVGMDTVKLKGLHFTPHLKAGDRVKVGDLILEFDLVEIRKAGYETITPVIVTNVDQFSELEPAGNQHKVVKEQELLYTVIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS5</accession>
    <name>E3EDS5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA-binding protein S4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yaaA</name>
        <name evidence="2" type="ORF">PPSC2_00015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368646.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13030"/>
    <dbReference type="EnsemblBacteria" id="ADO53991">
        <property type="protein sequence ID" value="ADO53991"/>
        <property type="gene ID" value="PPSC2_00015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3"/>
    <dbReference type="eggNOG" id="COG2501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127162_2_2_9"/>
    <dbReference type="OMA" id="DQFLKWA"/>
    <dbReference type="OrthoDB" id="2071059at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014330">
        <property type="entry name" value="RNA-bd_S4-rel_YaaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02988">
        <property type="entry name" value="YaaA_near_RecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="1">
        <location>
            <begin position="11"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO53991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="72" mass="7928" checksum="015414C9E406A20F" modified="2011-01-11" version="1">MKAISIQTEYIKLDQFLKLADCVSTGGMAKALLQEGQVRVNGEPEERRGRKLYPGDTVEVEDIGRFEVTAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="84" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS8</accession>
    <name>E3EDS8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DNA gyrase subunit B</fullName>
            <ecNumber evidence="10">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">gyrB</name>
        <name evidence="12" type="synonym">gyrB1</name>
        <name evidence="12" type="ORF">PPSC2_00030</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="10">Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="10">Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the type II topoisomerase GyrB family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the type II topoisomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368648.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13045"/>
    <dbReference type="EnsemblBacteria" id="ADO53994">
        <property type="protein sequence ID" value="ADO53994"/>
        <property type="gene ID" value="PPSC2_00030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6"/>
    <dbReference type="eggNOG" id="COG0187">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006146_4_1_9"/>
    <dbReference type="OMA" id="LWETTMH"/>
    <dbReference type="OrthoDB" id="205481at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03366">
        <property type="entry name" value="TOPRIM_TopoIIA_GyrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.670">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01898">
        <property type="entry name" value="GyrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002288">
        <property type="entry name" value="DNA_gyrase_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011557">
        <property type="entry name" value="GyrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001241">
        <property type="entry name" value="Topo_IIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013759">
        <property type="entry name" value="Topo_IIA_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013506">
        <property type="entry name" value="Topo_IIA_bsu_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018522">
        <property type="entry name" value="TopoIIA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034160">
        <property type="entry name" value="TOPRIM_GyrB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00204">
        <property type="entry name" value="DNA_gyraseB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00986">
        <property type="entry name" value="DNA_gyraseB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01751">
        <property type="entry name" value="Toprim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00433">
        <property type="entry name" value="TOP2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01059">
        <property type="entry name" value="gyrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00177">
        <property type="entry name" value="TOPOISOMERASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Toprim" evidence="11">
        <location>
            <begin position="420"/>
            <end position="534"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO53994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="636" mass="71104" checksum="2536937113C3EF3D" modified="2011-01-11" version="1">MSMNQPSYDAGEIQVLEGLEAVRKRPGMYIGSTSVKGLHHLVWEVVDNSIDEALAGYCNSIQVVVHKDNSITVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGYKVSGGLHGVGVSVVNALSSKMIVHVKRDGHVYEQEYHRGAPQYDVRVIGDTEETGTQTTFYPDEQIFTETTVYDYDTLQTRIRELAFLNKGIAISLTDERTGASDTFHYEGGISEYVQFLNQKREALHEQPIYVEGSRDMIQVEVALQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGLIKDNNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGIGDDFDITKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRKIIDAGYIYIAQPPLFKVERNKVVRYANSEAERDEIIKEFGENAKYNVQRYKGLGEMNATQLWETTMDPESRTMLQVTVSDAMLADTLFNTLMGDNVEPRRDFIQEHAKYVKNLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDT6</accession>
    <name>E3EDT6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Inhibitor of sigma-G Gin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">csfB</name>
        <name evidence="1" type="ORF">PPSC2_00075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368656.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13090"/>
    <dbReference type="EnsemblBacteria" id="ADO54002">
        <property type="protein sequence ID" value="ADO54002"/>
        <property type="gene ID" value="PPSC2_00075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.14"/>
    <dbReference type="eggNOG" id="ENOG5033CHE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_187385_2_1_9"/>
    <dbReference type="OMA" id="DAKYHFF"/>
    <dbReference type="OrthoDB" id="2053715at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019700">
        <property type="entry name" value="Sigma-G_inhibitor_Gin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10764">
        <property type="entry name" value="Gin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="7133" checksum="70DFA1B27203E50C" modified="2011-01-11" version="1">MHDQGDHRCIICGQHKHEGIFIVSEFICDTCEAEMVHTDATDAKYHFFIDQLKQIWVQKNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDU7</accession>
    <name>E3EDU7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AbrB family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">abrB3</name>
        <name evidence="3" type="ORF">PPSC2_00125</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007428005.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EDU7"/>
    <dbReference type="STRING" id="1406.LK13_13140"/>
    <dbReference type="EnsemblBacteria" id="ADO54013">
        <property type="protein sequence ID" value="ADO54013"/>
        <property type="gene ID" value="PPSC2_00125"/>
    </dbReference>
    <dbReference type="GeneID" id="66574939"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.24"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_158484_0_1_9"/>
    <dbReference type="OMA" id="VCRECAI"/>
    <dbReference type="OrthoDB" id="1942483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="2">
        <location>
            <begin position="6"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9433" checksum="C9B8CB271837FE22" modified="2011-01-11" version="1">MMKSTGIVRKVDELGRVVIPIELRRTLGIGEKDALEIYVDGERIMLKKYEPACIFCGNAENVIYFKGKIVCQDCISEIPTPVTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDU8</accession>
    <name>E3EDU8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YwfO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywfO</name>
        <name evidence="2" type="ORF">PPSC2_00130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368666.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13145"/>
    <dbReference type="EnsemblBacteria" id="ADO54014">
        <property type="protein sequence ID" value="ADO54014"/>
        <property type="gene ID" value="PPSC2_00130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.25"/>
    <dbReference type="eggNOG" id="COG1078">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026821_0_0_9"/>
    <dbReference type="OMA" id="FSHAMEH"/>
    <dbReference type="OrthoDB" id="370035at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045509">
        <property type="entry name" value="HD_assoc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19276">
        <property type="entry name" value="HD_assoc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HDc" evidence="1">
        <location>
            <begin position="54"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="50091" checksum="43ADEAC97F91D614" modified="2011-01-11" version="1">MHQPLSEEKVFKDPVHNYIHVQDTVIWRLINTPEFQRLRRIRQLGTSYLTFHGAEHSRFSHSLGVYEITRRIISQFERGDFPDWPKEERLIALCAALLHDVGHGPFSHSIEEAFHMNHEDWTCRIVLGDTKINAVLRQVDEMLPHKVAAVIAKTYDKPIVVNLVTSPLDADRMDYLLRDAHSTGVNYGTIDLDRILRLLRPHNGRIVVKESGMHAVEDYLMSRYQMYWQIYFHPVTRSSEILLRKIFKRAKELFKYGYEFGFLLDPLPDLLKGELTVEQYLMLDESLIQTVFSQWKREKDEILSDLSSRFMDRRLYKYVEIENMDTDTVDHIREALEKAGLHPEYDLEIDFPTDLPYDVFRQGGSTDNQILLLGRQGEVREISEVSEIVRSISGIHRGKYHMYFPQNKLNGVKERLPAEIGNYFVKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE71</accession>
    <name>E3EE71_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_04955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369627.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1012"/>
    <dbReference type="EnsemblBacteria" id="ADO54994">
        <property type="protein sequence ID" value="ADO54994"/>
        <property type="gene ID" value="PPSC2_04955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.998"/>
    <dbReference type="eggNOG" id="ENOG5032W8I">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1184109_0_0_9"/>
    <dbReference type="OMA" id="NNSEVNH"/>
    <dbReference type="OrthoDB" id="1662410at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="226" mass="25269" checksum="71A77A0B1CB720CC" modified="2011-01-11" version="1">MTSKMWGATIAVVSYLIALLLSSWLPLFVCLAIPIIGLGGYSLIMAVRHPRPNLTGSVIPVVQEQVGETQQHEKEDAVRPESITGQVRQPGQVSSEFAQVMEYLEVLEDMVISEGQKDALDNEIVEKALALFARLQRVIPLLHELNNSEVNHTVRRLILKDLNGLINPFLRLSGDAKRTNRRTLLNGLRDVDSKISVIVSTVEHKDLMELQSKAELIHQRYSSSEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEE1</accession>
    <name>E3EEE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histone acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydhI</name>
        <name evidence="2" type="ORF">PPSC2_06795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370023.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1413"/>
    <dbReference type="EnsemblBacteria" id="ADO55392">
        <property type="protein sequence ID" value="ADO55392"/>
        <property type="gene ID" value="PPSC2_06795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1399"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_115862_2_1_9"/>
    <dbReference type="OMA" id="TWDFQAP"/>
    <dbReference type="OrthoDB" id="2055010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13508">
        <property type="entry name" value="Acetyltransf_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16568" checksum="DADC85E9AB457BD9" modified="2011-01-11" version="1">MTLEPQMSRSSKDEARFVRNKLIEFNATHVPVDIQTQYEEINLTLKNGEGQVIGGLLSVLCWNWVEVDILWVDQVHRGKGYGSQLLDEIEQMARDKGCNFIQLNTFSFQAPEFYEKHGYEVVGVIEEAPRGFKHYYYKKNIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEH5</accession>
    <name>E3EEH5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Barnase inhibitor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_06945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the barstar family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370057.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1447"/>
    <dbReference type="EnsemblBacteria" id="ADO55426">
        <property type="protein sequence ID" value="ADO55426"/>
        <property type="gene ID" value="PPSC2_06945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1432"/>
    <dbReference type="eggNOG" id="COG2732">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1045245_0_0_9"/>
    <dbReference type="OMA" id="CLCGGFG"/>
    <dbReference type="OrthoDB" id="1540247at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000468">
        <property type="entry name" value="Barstar"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035905">
        <property type="entry name" value="Barstar-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01337">
        <property type="entry name" value="Barstar"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52038">
        <property type="entry name" value="SSF52038"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Barstar" evidence="2">
        <location>
            <begin position="168"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="30758" checksum="D38332D409231857" modified="2011-01-11" version="1">MRQRFAVMDDESGLTVGYCRDVVGLTGDIMVGTNEKVIFEQFEFNEEFIKNIAKTKQSVSNLYIAILDDEEKVIGSYHYHLPESYIIHKPNYSKGNFNLELTGILETKPSPVELRLWELLKCAQSLENNIWQGFSKEERSGWLNVTRIHSASNCFQSSRLDKRGDVYTLDGKHIFDFTTFFIALGEAINGPGGYFGFSLDSISDCLCGGFGVVGPFTIHWQNAHYFLERFEEEWDQEERYYRFSPQQYFMDLLTILVSGGVTVNFSSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEM6</accession>
    <name>E3EEM6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309582.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20825"/>
    <dbReference type="EnsemblBacteria" id="ADO55713">
        <property type="protein sequence ID" value="ADO55713"/>
        <property type="gene ID" value="PPSC2_08220"/>
    </dbReference>
    <dbReference type="GeneID" id="66573361"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1728"/>
    <dbReference type="eggNOG" id="ENOG50330BE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_128689_1_0_9"/>
    <dbReference type="OMA" id="AGSLKIW"/>
    <dbReference type="OrthoDB" id="1879632at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025689">
        <property type="entry name" value="Spore_YtrH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14034">
        <property type="entry name" value="Spore_YtrH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="11480" checksum="544878456CB36F4C" modified="2011-01-11" version="1">MSTFISKAILDFFIAFGIVLGGAMLGGMGAVVSLQPPTQTMLEVAGRIKIWALAAAVGGTMDPIRVIESNMLDGNLSPAIKQILYLIFAFLGAHMGAELVKWVCGNGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EES0</accession>
    <name>E3EES0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cisL</name>
        <name evidence="3" type="ORF">PPSC2_08440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370376.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1785"/>
    <dbReference type="EnsemblBacteria" id="ADO55757">
        <property type="protein sequence ID" value="ADO55757"/>
        <property type="gene ID" value="PPSC2_08440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1774"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="DGPHLVM"/>
    <dbReference type="OrthoDB" id="750230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="33360" checksum="B4553EB58136895E" modified="2011-01-11" version="1">MNLHALRLFHVVASTRSVTRASELLNISQPAITAQIKKFEKEISLTLLVPMGRGITLTDAGEKLAVLAKRLFAVEQQIEQFSQDYRDGAHGHIRLAATYLPAHFLIPAWIAKFKQQYEQVEMTIHTTNSNDALQHLLNIEVDLAIYGGLPEQYSDTIQTEELFRDELWFVVAPDHRYANQQVSLLEMMQEPFVMREKGSSTRERLFSLCRTYNAPAPKVTLNFTGLHEAITAVIAGYGANFVSSLVVREYVERGELCRVYVEGVQLLNSIAICTRKNEPLSAATQNFIQLIRNHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEY3</accession>
    <name>E3EEY3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-265</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-265</name>
        <name evidence="1" type="ORF">PPSC2_00595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368751.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0119"/>
    <dbReference type="EnsemblBacteria" id="ADO54106">
        <property type="protein sequence ID" value="ADO54106"/>
        <property type="gene ID" value="PPSC2_00595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.117"/>
    <dbReference type="eggNOG" id="ENOG50315SA">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_794197_0_0_9"/>
    <dbReference type="OMA" id="SVDCNAG"/>
    <dbReference type="OrthoDB" id="549761at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="349" mass="39862" checksum="AE6C838E28326557" modified="2011-01-11" version="1">MIDATARIIDMLGSGNKVDASIISAYTDVVAQYGTVKDAWELYRLFVEDPHHYIRGLLLQPIMRCGDVALAQDMYERYVRNQTSSEHIPDGVLHVLGYLGYVEAAADLVAWVNGPYGAASVDACLGLVHLPCESFRERLATELEQAVDQHLFDEFLPLLSFKCTTEDMIPRLVHWGERHASVDCNAGIIAGIALFGEEQKDTIRSILWNPLWEAHGTATGSCVWSYIAMQHVGLTFRELIQDIKSYDASKAGVQDLEYRLEVLYEMLELKLSYRVQPIRFARRNEESFAQIYSDLFSWSTEHKDDSIIGWMNDNLGYKHRLLKQYDELRKRVEIKMVHEIELEHVQTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF01</accession>
    <name>E3EF01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Peptidase S8</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">epr</name>
        <name evidence="5" type="ORF">PPSC2_00675</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368769.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13665"/>
    <dbReference type="MEROPS" id="S08.149"/>
    <dbReference type="EnsemblBacteria" id="ADO54124">
        <property type="protein sequence ID" value="ADO54124"/>
        <property type="gene ID" value="PPSC2_00675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.133"/>
    <dbReference type="eggNOG" id="COG1404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011263_15_0_9"/>
    <dbReference type="OMA" id="SGQYSWI"/>
    <dbReference type="OrthoDB" id="923655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07477">
        <property type="entry name" value="Peptidases_S8_Subtilisin_subset"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034202">
        <property type="entry name" value="Subtilisin_Carlsberg-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="SSF52743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Peptidase_S8" evidence="4">
        <location>
            <begin position="126"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="42792" checksum="A3C0320C71AACC59" modified="2011-01-11" version="1">MDYPDFLQRLHEGISEPSGSGRNKQIITFDKPHQYRECLSYLRKLKPELVGLRQVQPARLIRALIAPLSGGDRLGKYHHGVTVEEDTRIKVHAETAYMPKAEKNLSMPWGVKQVRAYKAWPSSTGNRVRIGVIDTGADFHHPDLRHSLARGINLLNRTMLPYDDNGHGTHIAGTIAASNYDEGMVGVAPRALIHPVKAFDHNGAAYVSDIILGIDWCVLNRVDIINMSFGMKSRSKALLDMVNKAYHNGIVIVASSGNEGKRRSIDYPARYSQTISVGATDKYRRIAPFSNRGQFVDVYAPGEKIRSSWIHGKHHEMSGTSMATSHVTGSIALLLSLKPELEPGEIKALLKRTATPLRLRKSAGRSSISTKLGEVDAFRLMQEGTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF43</accession>
    <name>E3EF43_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ydeR1</name>
        <name evidence="9" type="ORF">PPSC2_03000</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369202.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15815"/>
    <dbReference type="EnsemblBacteria" id="ADO54563">
        <property type="protein sequence ID" value="ADO54563"/>
        <property type="gene ID" value="PPSC2_03000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.571"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_23_0_9"/>
    <dbReference type="OMA" id="WRVMYQL"/>
    <dbReference type="OrthoDB" id="1210653at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="83"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="107"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="140"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="165"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="222"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="253"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="283"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="307"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="348"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="375"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="17"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="43548" checksum="C1BB63128F7852D0" modified="2011-01-11" version="1">MQREQQAVEGNRISNWMMFLLAAACGLIVANLYYAQTLVGPIHVAMDLSSTTAGFIVTLTQIGYVVGLLFIVPISDIIENRRLMVVSLIITVCALLVAAFAPNATLFLTASLFIGVGSVVAQILVPYATYLASEEQRGRVVGNVMSGLLLGIMFARPLASFITSIWGWQAVFIMSAIVLTLLTILLSRALPERKPVPTVSYSKLILSLGTLFKQTPALRRRALYQACLFGAFSLFWTVVPLRLADDFGMSQQGIALFALVGVGGAIAAPIAGRLADKGWSKGLTGLAMVIAALSFLVIYIFQSHSTAALILLFVSAITLDMAVSGNLVLGQRVIYSLGSEARGRLNGLFMSIFFIGGAIGSSLGGWSYALGGWNFSALIGVILPVLALLYYFTEKETGGDVRKKQIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF84</accession>
    <name>E3EF84_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YqfA1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yqfA1</name>
        <name evidence="3" type="ORF">PPSC2_03185</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369241.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15995"/>
    <dbReference type="EnsemblBacteria" id="ADO54604">
        <property type="protein sequence ID" value="ADO54604"/>
        <property type="gene ID" value="PPSC2_03185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.610"/>
    <dbReference type="eggNOG" id="COG2461">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026706_1_0_9"/>
    <dbReference type="OMA" id="LCHPPKS"/>
    <dbReference type="OrthoDB" id="565213at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007380">
        <property type="entry name" value="DUF438"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012312">
        <property type="entry name" value="Hemerythrin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04282">
        <property type="entry name" value="DUF438"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01814">
        <property type="entry name" value="Hemerythrin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF438" evidence="2">
        <location>
            <begin position="22"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="Hemerythrin" evidence="1">
        <location>
            <begin position="102"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="419" mass="48099" checksum="A656D755666036A1" modified="2011-01-11" version="1">MSELINNREHTAQELTERQRTLKEIIKELHAGKSVEEVKARFAEAVGGVSVAEISAMEHALMTEEGIPVSEVQRLCSVHTSIFKGSIEDIHRPAGPEEQPGHPVHTFKLENREIERLVNFKLALHAEQFQKEDSPKVIYKLLEDLSLLMDVDKHYSRKENLVFPYLERYGIFGPTKVMWGVDDGIRAAIKDAKKLLTEYNGDREQIGKALAHIMSEVNEMVFKEENILLPMALSKLTEDEWLKIARESEEIGFCLTAPEREWIPERAEEPVEALEQKEDTSGTPQGFVRFETGIVSVQQLELLLNHLPVDLTFIDENDVVRYFSHGKERIFARTKAVIGRTVQNCHPPQSVHVVEKLLEDFKAGRKDVEDFWIPIKDKFVYIRYFAVRDNEGRYLGTLEFTQNIAPIRALEGQKRILSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFM8</accession>
    <name>E3EFM8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hemAT</name>
        <name evidence="3" type="ORF">PPSC2_07375</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370146.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20355"/>
    <dbReference type="EnsemblBacteria" id="ADO55519">
        <property type="protein sequence ID" value="ADO55519"/>
        <property type="gene ID" value="PPSC2_07375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1525"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_21_4_9"/>
    <dbReference type="OMA" id="YVGQYGV"/>
    <dbReference type="OrthoDB" id="429006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01068">
        <property type="entry name" value="globin_sensor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044398">
        <property type="entry name" value="Globin-sensor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039379">
        <property type="entry name" value="Protoglobin_sensor_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11563">
        <property type="entry name" value="Protoglobin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="Methyl-accepting transducer" evidence="2">
        <location>
            <begin position="154"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="38577" checksum="880EB8D35B350964" modified="2011-01-11" version="1">MIHVAESRLKQIQYIGITDGDLALLHHYQGLFQSIVNEVVDRFYEHVEKVPHLVSIISKWSNIERLKQTQREYWLSLADGKIDDQFIEHRLFVGQVHSRIGLSSDYYLGTYIAYLDIAVDILKHSGIEDWYSIVHALSKMFNLDSQLVLEAYQEKEKEQINELADEQTQMLAVVSRIAQNLTGMIAELRENTDNIAESACNTASSQEHTEELVLQLSDEIKHIEQMSSTIRELSDQTHLLGLNAAIEAAHAQEAGRGFQVVAQEVRKLASNSKQAQEQIQRKVLDIARMLDSVQSETATTTASARQQASSSEELASFTKLIENMVKELEMLQHSPEMLEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFQ4</accession>
    <name>E3EFQ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370395.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1804"/>
    <dbReference type="EnsemblBacteria" id="ADO55776">
        <property type="protein sequence ID" value="ADO55776"/>
        <property type="gene ID" value="PPSC2_08530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1793"/>
    <dbReference type="HOGENOM" id="CLU_2790073_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="7779" checksum="3A04EA7A042BA750" modified="2011-01-11" version="1">MIKQEEQRQAELLKQYMEKHFKPPNGTGCLIEEMELAMYIDPVIKAGKKSDYSAISILVSNEGRSKCM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT7</accession>
    <name>E3EFT7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Chaperone protein HtpG</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Heat shock protein HtpG</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">High temperature protein G</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">htpG</name>
        <name evidence="8" type="synonym">htpG3</name>
        <name evidence="8" type="ORF">PPSC2_08675</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Molecular chaperone. Has ATPase activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370428.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21150"/>
    <dbReference type="EnsemblBacteria" id="ADO55809">
        <property type="protein sequence ID" value="ADO55809"/>
        <property type="gene ID" value="PPSC2_08675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1827"/>
    <dbReference type="eggNOG" id="COG0326">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006684_3_0_9"/>
    <dbReference type="OMA" id="MRRMKEM"/>
    <dbReference type="OrthoDB" id="246194at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00505">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019805">
        <property type="entry name" value="Heat_shock_protein_90_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037196">
        <property type="entry name" value="HSP90_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020575">
        <property type="entry name" value="Hsp90_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="PTHR11528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00183">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002583">
        <property type="entry name" value="Hsp90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00775">
        <property type="entry name" value="HEATSHOCK90"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110942">
        <property type="entry name" value="SSF110942"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00298">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="HATPase_c" evidence="7">
        <location>
            <begin position="25"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="region of interest" description="A; substrate-binding" evidence="5">
        <location>
            <begin position="1"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="489"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="region of interest" description="C" evidence="5">
        <location>
            <begin position="553"/>
            <end position="626"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="626" mass="72272" checksum="B759721453878241" modified="2011-01-11" version="1">MEKKQFQAESKRLLEMMINSIYTQKEIFLRELISNASDAIDKIYYKALTDDQLVFDKENYYIKVIADKDHRTLTLRDTGIGMTKEELENNLGVIAKSGSLAFKNENESKDGHDIIGQFGVGFYSAFMVADVVTVTTKALGSDTAYKWESTGADGYTIEAAEKDEVGTEIVLKIKENTEDESYDEYLDEYRLKALIKKYSDFIRYPIKMDVTGKRLKEGSDNEFEDYKEEQRINSMVPIWRKNKSELTDEDYQNFYAEKRYGYDKPLQHIHVSADGAVVYQAILFIPENIPFDFYSKEYEKGLELYANGVLIMEKSPDLLPDYFSFVKGMVDSESLSLNISREMLQHDRQLKLIAKNIESKIKGQLLTLLKNDREKYDQFYKSFGRQLKFGVYNDYGRHKETLQDLLMFYSSTEKKQVTLDEYVSRMPEDQKYIYYASGESNERIEKLPQTELVADKGYEILYFTDDIDEFAIKMLLSYKEKEFKSVSSGDLGIESDENEKETEAEQNDNKELFEYMKGLLEGKVSSVKASKRLKTHPVCLSADGEVTIEMEKILNAMPNNADVKANKVLEINVNHAVFNSLKEAFAEDKEKVNLYTALLYNQALLIEGLPLQDPVEFTNDICKIMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFZ7</accession>
    <name>E3EFZ7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UPF0122 protein PPSC2_09710</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yofM</name>
        <name evidence="5" type="ORF">PPSC2_09710</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 3">Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the UPF0122 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370645.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22175"/>
    <dbReference type="EnsemblBacteria" id="ADO56030">
        <property type="protein sequence ID" value="ADO56030"/>
        <property type="gene ID" value="PPSC2_09710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2046"/>
    <dbReference type="eggNOG" id="COG2739">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_129218_0_2_9"/>
    <dbReference type="OMA" id="SIQEWQE"/>
    <dbReference type="OrthoDB" id="2008796at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00245">
        <property type="entry name" value="UPF0122"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007394">
        <property type="entry name" value="UPF0122"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40083">
        <property type="entry name" value="PTHR40083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04297">
        <property type="entry name" value="UPF0122"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="53"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00024764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="14698" checksum="BED492693106E3AB" modified="2011-01-11" version="1">MSQENRLEKTNRINRLFDFYEPLLTEKQQMFLKYYFHDDFSLGEIASEFQISRQAVYEHIKRAEQVLEMYEEKLGLLSKHERRIQDLEELNATLYDAFGKVGKPDKDTLQHVQQIVNRLQEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG89</accession>
    <name>E3EG89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">AAG</name>
        <name evidence="2" type="ORF">PPSC2_12250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2609"/>
    <dbReference type="CAZy" id="CBM13">
        <property type="family name" value="Carbohydrate-Binding Module Family 13"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56579">
        <property type="protein sequence ID" value="ADO56579"/>
        <property type="gene ID" value="PPSC2_12250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2594"/>
    <dbReference type="eggNOG" id="COG3507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038125_2_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00161">
        <property type="entry name" value="RICIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008397">
        <property type="entry name" value="Alginate_lyase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008929">
        <property type="entry name" value="Chondroitin_lyas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035992">
        <property type="entry name" value="Ricin_B-like_lectins"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000772">
        <property type="entry name" value="Ricin_B_lectin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05426">
        <property type="entry name" value="Alginate_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14200">
        <property type="entry name" value="RicinB_lectin_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00458">
        <property type="entry name" value="RICIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48230">
        <property type="entry name" value="SSF48230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50370">
        <property type="entry name" value="SSF50370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50231">
        <property type="entry name" value="RICIN_B_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ricin B-type lectin" evidence="1">
        <location>
            <begin position="292"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="396" mass="43952" checksum="85AC8F549ACA6458" modified="2011-01-11" version="1">MRDYPGFNVEQMQDMLLTVFYKPLNERFLIGNEYGNSHNDSYIQNYWANWDLSNMAATIAIGIFCDRQDIYDIGVEYFKNGAGNGSIYNAIPFLHPDGLAQWQESGRDQAHTQLGVGLMATIAEMAWNQGDDLYGWADNRFLRAAEYVAKYNNGEAVPFTTYEWGSGRNGAINSQSGISPASRNEMRPIWAMIYNHYVNRKGLSAPNIAARMALEGTEGGPNLKYPSTFDQLGFGTLLYTRPAGSGDKASIPDGNVSNGIYRFNVRLDGKVMEADNTIEGANVIKSTYAGKENQQWSVTHLGGGQYSIKNVQSGRSLEVTNGSLDHGAKFQLAASTDQDQQKFAFISTGDGYYRITPVISNKPADVTGLSTAEGVPIQQWRYTSNYNQQWKLESIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGX6</accession>
    <name>E3EGX6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">UDP-glucose 6-dehydrogenase</fullName>
            <ecNumber evidence="4 7">1.1.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">tuaD</name>
        <name evidence="12" type="ORF">PPSC2_05940</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H2O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate</text>
            <dbReference type="Rhea" id="RHEA:23596"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58052"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="1.1.1.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nucleotide-sugar biosynthesis; UDP-alpha-D-glucuronate biosynthesis; UDP-alpha-D-glucuronate from UDP-alpha-D-glucose: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.22" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369842.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18905"/>
    <dbReference type="EnsemblBacteria" id="ADO55210">
        <property type="protein sequence ID" value="ADO55210"/>
        <property type="gene ID" value="PPSC2_05940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1216"/>
    <dbReference type="eggNOG" id="COG1004">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023810_1_2_9"/>
    <dbReference type="OrthoDB" id="647136at2"/>
    <dbReference type="UniPathway" id="UPA00038">
        <property type="reaction ID" value="UER00491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003979">
        <property type="term" value="F:UDP-glucose 6-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006065">
        <property type="term" value="P:UDP-glucuronate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028357">
        <property type="entry name" value="UDPglc_DH_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500134">
        <property type="entry name" value="UDPglc_DH_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 10" id="KW-0520">NAD</keyword>
    <keyword evidence="5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="11">
        <location>
            <begin position="311"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="150"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="247"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8">
        <location>
            <position position="258"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="153"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="255"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="261"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="318"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="325"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="446" mass="48305" checksum="3ECC6775C5DE0B8A" modified="2011-01-11" version="1">MKLCVIGAGYVGLVSGVCFAALGNTVVCIDQNEDKIRQLRAGGVPIYEPGLKALIKDNVEQGRLSFTTDTAASVQAADIVILAVGTPSLPSGEANLSYIEEAACEVADAMNGYKIIVTKSTVPVGTNERIQNWIASRTNYPFGVASVPEFLREGSAVMDTLQPDRIVIGASDPHVSAVLTTLHEPLTTNILTTDIHSAEMIKYASNAFLATKISFINEIANICEKVGADVTRVAHGMGLDQRIGSSFLSAGIGYGGSCFPKDTQALIQIAGNVDYEFKLLKSVVEVNQGQRFNVIRKLKEALGELEGATIGIWGLAFKPNTDDVRDAPALDIMQSLLEAGAHIRAYDPIATANFRRLLDSPEIKWADSAREAAEGCDALCLLTEWEEFGEVGLGELNELMKYPIMIDGRNVYREEQIRQSAFAYYSVGRPQMNNLDIDRHQSVVNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGZ1</accession>
    <name>E3EGZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Beta-xylosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pagaT</name>
        <name evidence="5" type="ORF">PPSC2_07530</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glycosyl hydrolase 43 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370178.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20500"/>
    <dbReference type="CAZy" id="CBM13">
        <property type="family name" value="Carbohydrate-Binding Module Family 13"/>
    </dbReference>
    <dbReference type="CAZy" id="GH43">
        <property type="family name" value="Glycoside Hydrolase Family 43"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55551">
        <property type="protein sequence ID" value="ADO55551"/>
        <property type="gene ID" value="PPSC2_07530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1556"/>
    <dbReference type="eggNOG" id="COG3507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016116_0_0_9"/>
    <dbReference type="OMA" id="DQWDSNS"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00161">
        <property type="entry name" value="RICIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006710">
        <property type="entry name" value="Glyco_hydro_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035992">
        <property type="entry name" value="Ricin_B-like_lectins"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000772">
        <property type="entry name" value="Ricin_B_lectin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04616">
        <property type="entry name" value="Glyco_hydro_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14200">
        <property type="entry name" value="RicinB_lectin_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00458">
        <property type="entry name" value="RICIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50370">
        <property type="entry name" value="SSF50370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50231">
        <property type="entry name" value="RICIN_B_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168950" evidence="3">
        <location>
            <begin position="33"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="domain" description="Ricin B-type lectin" evidence="4">
        <location>
            <begin position="385"/>
            <end position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="488" mass="53814" checksum="98AC008A1F73694E" modified="2011-01-11" version="1">MKYDFARLLCIMLTILLSLSIFQMFSPKIASATSANVVNGIQFKDTDGNVVHAHGGGMIKVDGYYYWFGENRNPNGTFKAVSAYRSSDLKNWEFRKNVLTSSSAVELNVSNIERPKVIYNEKTRKYVLWMHKENGINYNEARVAVASSDTVDGDYTYQGSFRPLDYDSRDMTVYNDNGTAYLISATRVNADLNIYRLTPDFLQVESLVTTLWPGQYREAPAMFKKGDVYFLITSGATGWNPNQAKYATASSIEGTWSNTMNFGDGTTYGSQSAYVIPVEGTQTTSYLYLGDRWAGAWSGPVQDSQYVWLPLRFPTATSLAMDWFDSINVDTASGVVEGITTPMVIDPDAYYQLVSRKSNKPLGIIGNATIDGADLEQRANSGAPSQQWQLKDAGGGYYKIVNRNSGKLIGVESGATADGAVIEQWNDGGWSSQHWQLVSVTGGYYKLKNRATGKLIDISEGATGDGAKAIQWGDNGGTNQHFRVVKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH71</accession>
    <name>E3EH71_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Oligoendopeptidase F</fullName>
            <ecNumber evidence="6">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yjbG</name>
        <name evidence="9" type="ORF">PPSC2_08920</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Has oligopeptidase activity and degrades a variety of small bioactive peptides.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="6">Binds 1 zinc ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the peptidase M3B family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370480.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21385"/>
    <dbReference type="EnsemblBacteria" id="ADO55862">
        <property type="protein sequence ID" value="ADO55862"/>
        <property type="gene ID" value="PPSC2_08920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1880"/>
    <dbReference type="eggNOG" id="COG1164">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021290_2_0_9"/>
    <dbReference type="OMA" id="YRQTMFA"/>
    <dbReference type="OrthoDB" id="1935578at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1370.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013647">
        <property type="entry name" value="OligopepF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042088">
        <property type="entry name" value="OligoPept_F_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045090">
        <property type="entry name" value="Pept_M3A_M3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001567">
        <property type="entry name" value="Pept_M3A_M3B_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004438">
        <property type="entry name" value="Peptidase_M3B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11804">
        <property type="entry name" value="PTHR11804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01432">
        <property type="entry name" value="Peptidase_M3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08439">
        <property type="entry name" value="Peptidase_M3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00181">
        <property type="entry name" value="pepF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1 6" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M3_N" evidence="8">
        <location>
            <begin position="113"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M3" evidence="7">
        <location>
            <begin position="202"/>
            <end position="582"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="598" mass="68897" checksum="C9D766966C281484" modified="2011-01-11" version="1">MSEIVKRADAPVENTWKLEDLFPNRKAWDQEYEEVKQLAKKAAQFQGKLNSAEAIGNCFKLEDELSLKTERVYVYAHLHHDEDTAEPTYQGLSQKAKKLGVEVSESLSFVTPEILALPDSQLDAFIEDPKLSDYKFTLQEMKREKAHVLGKTEEALLAQVGNLAQAPQTIFGMLNNADLKFPKIKDEHGKEVELTHGSYIQFLESPHREVRERAFKAVYDTYAKNKNTIASTLSANVNKNIFYSRVRKYPSVLEMSLYGDNIPKEVYTNLIDTIHESLPLLHRYIKLRKKLLGVDELHMYDLFAPLVDEYKMDITYEDAKKQTKEGLKPLGEDYLASLQKGYDERWIDVYENENKRTGAYSWGAYGTHPYVLLNHKDNLNSMFTLAHEMGHALHSYYSDNALKYRDAQYTIFLAEVASTTNEALLMDYLLNKSTDPKEKMYLLTYYADQFRTTVFRQTMFAEFEKIVHERAEQGESLTPQLLSEIYYDLNVKYHGPGMKVDKDIEMEWARIPHFYNSFYVYKYATGFSAATSFSKQILEEGQPAVDRYLGFLKSGGSDYSINILKKAGVDMSSPQPIREAMSVFEEVITEMEKLTEGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHF7</accession>
    <name>E3EHF7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Transcription termination/antitermination protein NusA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">nusA</name>
        <name evidence="10" type="ORF">PPSC2_10085</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Participates in both transcription termination and antitermination.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the NusA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370720.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22555"/>
    <dbReference type="EnsemblBacteria" id="ADO56110">
        <property type="protein sequence ID" value="ADO56110"/>
        <property type="gene ID" value="PPSC2_10085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2126"/>
    <dbReference type="eggNOG" id="COG0195">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029242_2_2_9"/>
    <dbReference type="OMA" id="MDIDMSA"/>
    <dbReference type="OrthoDB" id="384865at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1480.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00945_B">
        <property type="entry name" value="NusA_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025249">
        <property type="entry name" value="KH_dom_NusA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030842">
        <property type="entry name" value="NusA_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036555">
        <property type="entry name" value="NusA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013735">
        <property type="entry name" value="TF_NusA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010213">
        <property type="entry name" value="Tscrpt_termination_fac_NusA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22648">
        <property type="entry name" value="PTHR22648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13184">
        <property type="entry name" value="KH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08529">
        <property type="entry name" value="NusA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69705">
        <property type="entry name" value="SSF69705"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01953">
        <property type="entry name" value="NusA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="5 7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1 7" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="S1 motif" evidence="9">
        <location>
            <begin position="135"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="341"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="341"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="365" mass="41243" checksum="E8DA6DDEB8DB4C99" modified="2011-01-11" version="1">MSMDFIEAMNELEREKGISKDVLFEAIEAALISSYKRNFNTAQNVRVDMNRNSGVIKVYARKLIVEEVLDPRTEISLPAAREINPHFQLEDVAEIEVTPRDFGRIAAQTAKQVVTQRIREAERGLIYNKFVDKEEDIVTGTVQRQDPRNIYIDLGKVEAVLPLSELMPNEKFNHLDRIKAYITKVENTTKGPQIMLSRSHPGLLKRLFELEVPEIFDGVVEIRSVAREAGFRSKIAVHSRNAEVDPVGSCVGPRGTRVQTIVNELRGEKIDIVRYSDNVDEYVANALSPSKVLEVQVFEEEKMARVIVPDYQLSLAIGIKGQNARLAAKLTGWKIDIKSETQAEEELGRPRTSTDEMHQDSVSVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI12</accession>
    <name>E3EI12_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Osmotically inducible protein OsmC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ymaD3</name>
        <name evidence="2" type="ORF">PPSC2_12345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the OsmC/Ohr family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371205.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2632"/>
    <dbReference type="EnsemblBacteria" id="ADO56601">
        <property type="protein sequence ID" value="ADO56601"/>
        <property type="gene ID" value="PPSC2_12345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2619"/>
    <dbReference type="eggNOG" id="COG1764">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105860_3_0_9"/>
    <dbReference type="OMA" id="SITHRPH"/>
    <dbReference type="OrthoDB" id="1984062at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="16049" checksum="A947ABD7337E1C09" modified="2011-01-11" version="1">MANQKLSLNTVWYGNAKGNGIIKSENFQTQIAIPVSKGGSGEGVEPKKLLMSSAAACYLMTLTYMLEQNRIPVLGLSMDTEGNTAPNGQLSITHRPHIVLKKSEATNQDVSMAETLMRNAEENCQIGQLLVKADVQITIEGHVSFEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI61</accession>
    <name>E3EI61_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykoE1</name>
        <name evidence="2" type="ORF">PPSC2_03755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369365.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16570"/>
    <dbReference type="EnsemblBacteria" id="ADO54729">
        <property type="protein sequence ID" value="ADO54729"/>
        <property type="gene ID" value="PPSC2_03755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.739"/>
    <dbReference type="eggNOG" id="COG4721">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089225_1_0_9"/>
    <dbReference type="OMA" id="GVIFWAW"/>
    <dbReference type="OrthoDB" id="1706262at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017195">
        <property type="entry name" value="ABC_thiamin-permease_prd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09819">
        <property type="entry name" value="ABC_cobalt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="21108" checksum="DECCBC62C37E8C9F" modified="2011-01-11" version="1">MKESRIFAKFTTLDIVLMAMLATLNGVMTVYLSMINKTLNSLGGPIATSAIVGLYMIYGLLAYYIIRKPGTAVIAYAFGAVVQSFMGSAYGIASIIAAAVCYMVVAELVFALLRYRRWNTVSLMLAGGAMVPLWFIVAANMFGYMHWGWKVLTIALVVRILSGIVLCGLLTKVLGDALNGTGLLKRFELGRASRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI82</accession>
    <name>E3EI82_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-899</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-899</name>
        <name evidence="1" type="ORF">PPSC2_03840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369386.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16655"/>
    <dbReference type="EnsemblBacteria" id="ADO54750">
        <property type="protein sequence ID" value="ADO54750"/>
        <property type="gene ID" value="PPSC2_03840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.760"/>
    <dbReference type="eggNOG" id="COG2081">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025174_3_1_9"/>
    <dbReference type="OMA" id="RCNFTNM"/>
    <dbReference type="OrthoDB" id="1513550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004792">
        <property type="entry name" value="BaiN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023166">
        <property type="entry name" value="HI0933-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42887">
        <property type="entry name" value="PTHR42887"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00275">
        <property type="entry name" value="TIGR00275"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="420" mass="45709" checksum="460E039CA3416452" modified="2011-01-11" version="1">MTYDVIVIGGGSAGLMAAAAASGEGAKVLLVEKGNKLGRKLGISGGGRCNVTNAKELDELIRHIPGNGRFLHSALAAFGNRDIIAFFEQLGIALKEEDNGRMFPVTDKAKTVVDALINKVRSQGVEIRTSCPVQEVIYKEGHTAGVRLRSGEMLRSRNVIVAVGGKSVPHTGSEGDGYAWAEQAGHTITELYPTEVPLTSGETFIQTKELQGLSLRNISLTVWNAKQKKVVVHEGDMIFTHFGLSGPTALRCSQFVVKGMKKDKVNTVLLTLDLQPHKHADEVYRETLELASVDAKKAIKNVLKPYLPERMIPLLLQQAELREDLTYDHIPKQQWQELAHRIKAFPIRVNGTLSLKEAFVTGGGVNLKEINPKTMESKLMPGLFFCGEILDIHGYTGGYNITAAFTTGHTAGTQAALNEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIL6</accession>
    <name>E3EIL6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370281.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1678"/>
    <dbReference type="EnsemblBacteria" id="ADO55654">
        <property type="protein sequence ID" value="ADO55654"/>
        <property type="gene ID" value="PPSC2_07930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1665"/>
    <dbReference type="eggNOG" id="COG4842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_610900_0_0_9"/>
    <dbReference type="OrthoDB" id="1877163at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036689">
        <property type="entry name" value="ESAT-6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010310">
        <property type="entry name" value="T7SS_ESAT-6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06013">
        <property type="entry name" value="WXG100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140453">
        <property type="entry name" value="SSF140453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03930">
        <property type="entry name" value="WXG100_ESAT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="251"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="258"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="278"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="448" mass="48439" checksum="7DBDE63AD1FF3DD1" modified="2011-01-11" version="1">MGRILVPPDKLMEVADQFLHGKHEMERMLNFLSGRIDFVQQGWSGAAQERFFQEFQVSRQSMSVTLERLSAVAQELIFISKNFTQVDGEKVVLDVPWLGTPVKTASTGEGWLHKIFEQIGQAEITKAEAQLEASKLQGEILWDTAQGAKGAIQGNLTLGMLPDKERDYNHPMAAKVGEILGHVATTLQGAGEVVAGLGGEGLSVAVSSTGVGSIIGVPGLIGSAALAAHGATTAVKSAKGVGESSAKLWKMAKGEGGGSSKSTPSSGAKAESATPTESKGRNQEELKQKLSHERELKADKKPENRMETLAQAEKNIAEHKMQMEKLIDSDGNFNLSNGLIENGKISKHQLQSWVPSGASNNFRPDPGIIESGYKYNFNYNGTKVEIKWHSPQLNLSSKLSPSELAASNSYNGWSAQIKIGRKYLGTDANLYRNNQQNIYTSGSWEVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIM4</accession>
    <name>E3EIM4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Methylthioribose-1-phosphate isomerase</fullName>
            <shortName evidence="2">M1Pi</shortName>
            <shortName evidence="2">MTR-1-P isomerase</shortName>
            <ecNumber evidence="2">5.3.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">S-methyl-5-thioribose-1-phosphate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mtnA</name>
        <name evidence="3" type="synonym">iF2B</name>
        <name evidence="3" type="ORF">PPSC2_07965</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>S-methyl-5-thio-alpha-D-ribose 1-phosphate = S-methyl-5-thio-D-ribulose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:19989"/>
            <dbReference type="ChEBI" id="CHEBI:58533"/>
            <dbReference type="ChEBI" id="CHEBI:58548"/>
            <dbReference type="EC" id="5.3.1.23"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 1/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.23" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370287.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20660"/>
    <dbReference type="EnsemblBacteria" id="ADO55662">
        <property type="protein sequence ID" value="ADO55662"/>
        <property type="gene ID" value="PPSC2_07965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1675"/>
    <dbReference type="eggNOG" id="COG0182">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016218_1_2_9"/>
    <dbReference type="OMA" id="RLWVDET"/>
    <dbReference type="OrthoDB" id="1290468at2"/>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00874"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046523">
        <property type="term" value="F:S-methyl-5-thioribose-1-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019284">
        <property type="term" value="P:L-methionine salvage from S-adenosylmethionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01678">
        <property type="entry name" value="Salvage_MtnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005251">
        <property type="entry name" value="IF-M1Pi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011559">
        <property type="entry name" value="Initiation_fac_2B_a/b/d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027363">
        <property type="entry name" value="M1Pi_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00524">
        <property type="entry name" value="eIF-2B_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00512">
        <property type="entry name" value="salvage_mtnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1 2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="65"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="270"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="260"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="219"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="2">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="369" mass="39684" checksum="69A1BC43DFF2BA42" modified="2011-01-11" version="1">MSENKKWTPASSREASATGQPLSSLVWKGNHLSMLDQRLLPETIVMLDLFTTEEVWEGIHAMKVRGAPAIGMAAAYGVVLGAISYRGNDAAGWLEHVHAVCGHLATSRPTAVNLFWALDRMKKRACELVTEAEVSQIEDWNAGLEREAIAIQAEDEEVCRQIGIHALPLFEDGMGVLTHCNAGGLATAKYGTALAPLYLAQENGIHLKVFADETRPVLQGARLTAFELQQAGIDVTLLCDNMAGMVMSKGWVQAVIVGTDRVAANGDVANKIGTYSLAVLAKAHGIPFYVASPLSTIDLQTATGADIPIEERSAEEVTESFGKRTAPEGIKVYNPAFDVTPHKYITAIITEKGIVQAPFSENLTALFAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIP1</accession>
    <name>E3EIP1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370302.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1704"/>
    <dbReference type="EnsemblBacteria" id="ADO55679">
        <property type="protein sequence ID" value="ADO55679"/>
        <property type="gene ID" value="PPSC2_08050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1694"/>
    <dbReference type="HOGENOM" id="CLU_2303135_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11218" checksum="373D8B5BB31E5F84" modified="2011-01-11" version="1">MSNKRGASKSGGEPIEFVKGEIIGFTYKNNSSINLSAKSPNLAHSLHIRSKIPLHSLPSVVDNADNSNMLYTWASTEYKPDTEDYYRKCNIQIVRNENTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-04-07" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIP3</accession>
    <name>E3EIP3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55681.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025676018.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1706"/>
    <dbReference type="EnsemblBacteria" id="ADO55681">
        <property type="protein sequence ID" value="ADO55681"/>
        <property type="gene ID" value="PPSC2_08060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1696"/>
    <dbReference type="HOGENOM" id="CLU_1957416_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55681.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14942" checksum="023C1706F1122954" modified="2015-05-27" version="2">MKRRYIFILILLSLLVITTTIIFLVNLGDNTKYKYPSGKDTVEYFGDGTFQILRGGPQDPLILYNHLADPLEKAVDNIVSYKIKKNIVYVVGENSFIKLDSNTNTYVKKKRISDFTPKDREIFNELMEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIQ1</accession>
    <name>E3EIQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">CotJA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cotJA</name>
        <name evidence="1" type="ORF">PPSC2_08110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370312.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20740"/>
    <dbReference type="EnsemblBacteria" id="ADO55689">
        <property type="protein sequence ID" value="ADO55689"/>
        <property type="gene ID" value="PPSC2_08110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1706"/>
    <dbReference type="eggNOG" id="ENOG50332J6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_185836_0_0_9"/>
    <dbReference type="OMA" id="PCPPIRV"/>
    <dbReference type="OrthoDB" id="2024179at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020256">
        <property type="entry name" value="Spore_coat_CotJA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11007">
        <property type="entry name" value="CotJA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8321" checksum="50AE3B3C2435CEC6" modified="2011-01-11" version="1">MKFPQQGQYAPFVGPFDPCPPILCKTYVLPPNLFIQFQPPGLPQFSPEEALTKGTLWPLLFSPYEPRRNQGGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIR5</accession>
    <name>E3EIR5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Alpha-N-arabinofuranosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">abf2</name>
        <name evidence="5" type="ORF">PPSC2_09265</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 43 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370551.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21735"/>
    <dbReference type="CAZy" id="GH43">
        <property type="family name" value="Glycoside Hydrolase Family 43"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55934">
        <property type="protein sequence ID" value="ADO55934"/>
        <property type="gene ID" value="PPSC2_09265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1952"/>
    <dbReference type="eggNOG" id="COG3940">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009397_2_1_9"/>
    <dbReference type="OMA" id="LFQHRMY"/>
    <dbReference type="OrthoDB" id="386120at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016828">
        <property type="entry name" value="Alpha-L-arabinofuranosidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006710">
        <property type="entry name" value="Glyco_hydro_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04616">
        <property type="entry name" value="Glyco_hydro_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF025414">
        <property type="entry name" value="Alpha-L-arabinofuranosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="197"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity, responsible for pKa modulation of the active site Glu and correct orientation of both the proton donor and substrate" evidence="3">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="36808" checksum="3ED7478F3222327C" modified="2011-01-11" version="1">MNQTVSFNNPVIEQRADPWIYKHSDGYYYFTGSVPEYDRIEVRRARTIQGLNTAEPVAVWHKYETGPLSANIWAPEIHYINDKWYIYFAAARTTETKEGLFDHRMFVLENDSANPLEGEWVEKGQIKTRWETFALDATTFQHNGVLYYVWAQKDPDIVGNSNLYISEMSNPWTLRGEQVMISTPEYDWEVIGFKVNEGAAVLKRNGRIFISYSASATDHNYCMGLLTADENANLLDPKSWAKSPAPVFCTNEETGQFGPGHNSFTVAEDGSDVIVYHARNYKEITGDPLYDPNRHTRVQPLNWNEDGTPNFGIPVPDGVSVNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIX3</accession>
    <name>E3EIX3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Frataxin iron chaperone</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydhG</name>
        <name evidence="2" type="ORF">PPSC2_09535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370609.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22005"/>
    <dbReference type="EnsemblBacteria" id="ADO55992">
        <property type="protein sequence ID" value="ADO55992"/>
        <property type="gene ID" value="PPSC2_09535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2010"/>
    <dbReference type="eggNOG" id="COG5646">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_162718_0_0_9"/>
    <dbReference type="OMA" id="IAWNQPM"/>
    <dbReference type="OrthoDB" id="1278667at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014922">
        <property type="entry name" value="DUF1801"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08818">
        <property type="entry name" value="DUF1801"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1801" evidence="1">
        <location>
            <begin position="17"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="124" mass="14378" checksum="9DDF1770D06C9D44" modified="2011-01-11" version="1">MEVFAEYLAHIDNPQHRARTEEVLAWVTKNFPNLLPKIAWNQPMFMDHGTFIIGFSVAKHHLAVAPEKAGINHFSELIVQAGYNHTKQLVRIQWDSPVDFSLLEKIIEFNILDKADCSTFWREC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJA3</accession>
    <name>E3EJA3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Putative pyruvate, phosphate dikinase regulatory protein</fullName>
            <shortName evidence="5">PPDK regulatory protein</shortName>
            <ecNumber evidence="5">2.7.11.32</ecNumber>
            <ecNumber evidence="5">2.7.4.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_11375</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ADP + N(tele)-phospho-L-histidyl/L-threonyl-[pyruvate, phosphate dikinase] = AMP + H(+) + N(tele)-phospho-L-histidyl/O-phospho-L-threonyl-[pyruvate, phosphate dikinase]</text>
            <dbReference type="Rhea" id="RHEA:43692"/>
            <dbReference type="Rhea" id="RHEA-COMP:10650"/>
            <dbReference type="Rhea" id="RHEA-COMP:10651"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:83586"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.32"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>H(+) + N(tele)-phospho-L-histidyl/O-phospho-L-threonyl-[pyruvate, phosphate dikinase] + phosphate = diphosphate + N(tele)-phospho-L-histidyl/L-threonyl-[pyruvate, phosphate dikinase]</text>
            <dbReference type="Rhea" id="RHEA:43696"/>
            <dbReference type="Rhea" id="RHEA-COMP:10650"/>
            <dbReference type="Rhea" id="RHEA-COMP:10651"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:83586"/>
            <dbReference type="EC" id="2.7.4.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PDRP subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.32" evidence="5"/>
    <dbReference type="EC" id="2.7.4.27" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370995.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23735"/>
    <dbReference type="EnsemblBacteria" id="ADO56390">
        <property type="protein sequence ID" value="ADO56390"/>
        <property type="gene ID" value="PPSC2_11375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2406"/>
    <dbReference type="eggNOG" id="COG1806">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046206_2_1_9"/>
    <dbReference type="OMA" id="GPMMQAF"/>
    <dbReference type="OrthoDB" id="980472at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016776">
        <property type="term" value="F:phosphotransferase activity, phosphate group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006470">
        <property type="term" value="P:protein dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00921">
        <property type="entry name" value="PDRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005177">
        <property type="entry name" value="Kinase-pyrophosphorylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026565">
        <property type="entry name" value="PPDK_reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31756">
        <property type="entry name" value="PTHR31756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03618">
        <property type="entry name" value="Kinase-PPPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 5 6" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="152"/>
            <end position="159"/>
        </location>
        <ligand>
            <name>ADP</name>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="267" mass="30138" checksum="E11B75F8CE49D019" modified="2011-01-11" version="1">MVQASSHFIAICSDSIGETAEAVVQATMRQFELPDTEIKRFMNVRDEDELSRVMEEVAERKGFVAYTLVQPELREAMKEEAVRLNVRAVDIMGPMMQAFADTFHNDPKEKPGLLHRLDDNYFRRVEALDFAVQYDDGKDVSAILKADIVLLGVSRISKTPLSMFLAHKGYKTVNIPVVPELTPPVQLKDVQRGRVFGLTIQPELLLKIRSERLKVMGLPNNVQYATATRVEEEIAYAQSLFKELNCPVIDVTDKAIEETAGLIVRML</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJE7</accession>
    <name>E3EJE7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_11585</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Transcriptional repressor of xylose-utilizing enzymes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ROK (NagC/XylR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56434.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23950"/>
    <dbReference type="EnsemblBacteria" id="ADO56434">
        <property type="protein sequence ID" value="ADO56434"/>
        <property type="gene ID" value="PPSC2_11585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2449"/>
    <dbReference type="eggNOG" id="COG1940">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067512_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0859">Xylose metabolism</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56434.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="38101" checksum="5267569DAC35967D" modified="2015-05-27" version="2">MQPVSNNTIRVKHINVELVKNTLKSKEYATKSSIASITGLSVATCGNILNELLQTGEVLEMELEESNGGRPARRYKYNADYSYIICLTVKTEGGVDSLTYAVANMLGDIIAENTSVVPHIDYEVIDHQIEELINNYENVKAIGIGIPGVVHQGVIDVCDLDLLIGVPVGPRLQDKYGVEVTIENDMHLTVYGFYNMQNYDEDKTFAIVTFPKDNFPGAGFIVDGHLLKGNTKFAGEVSFLPFGITREEQLKQLNSTQEFVFLAIKTITSIIAIIDPVSIALTGELSKPALLDDIYNGCLKDVPKEHMPEIFVKNDTHDEYMYGLISVTLESLTYNLQLVEKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJF5</accession>
    <name>E3EJF5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yuxL</name>
        <name evidence="4" type="ORF">PPSC2_11900</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S9C family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371110.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24220"/>
    <dbReference type="EnsemblBacteria" id="ADO56505">
        <property type="protein sequence ID" value="ADO56505"/>
        <property type="gene ID" value="PPSC2_11900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2521"/>
    <dbReference type="eggNOG" id="COG0823">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1506">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008615_2_1_9"/>
    <dbReference type="OMA" id="DENHWIM"/>
    <dbReference type="OrthoDB" id="821953at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011659">
        <property type="entry name" value="PD40"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001375">
        <property type="entry name" value="Peptidase_S9"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07676">
        <property type="entry name" value="PD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00326">
        <property type="entry name" value="Peptidase_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S9" evidence="3">
        <location>
            <begin position="464"/>
            <end position="673"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="675" mass="75120" checksum="90B5C15512875730" modified="2011-01-11" version="1">MSNSQAGTTKRRIIAEDLYRFHWVSDPAVHPTSGEIAYVEQCINKEQTDYNSAIWLLPFEGEAPIPFTYGPKDETPVWSPDGSQLAFLRSTDGKRQVWIIPARGGEARQLTHVENNVRSLSWSPDGAYISFVAKTAENQSSSTCDVGEQETHLEGRVVNRTKAKSDGYGLWDDTRDHLYVTDVTSGHTVQLTSGAYDVAEPVWSPNGQLILFIARIAEHSKEDTDLRKQNDLFTIAPASSNGNAAAPFKLTHSELQIESAAFSPDGTMIAFYGHDRHAKGATQTRLYTVPSSGGKAVCVSETLDAHLGNAGMSDMRSHLHVGPPRFSADGQSLYTLVTIEGNVHVYQFALDGTFKILTQGEREIYQFELTSDEQHIIAASTDVALPGDLFRIAIHSGNEERLTRVNDSLLDEIEISVPESFWTEVEDGRRVQGWVMKPAGFKEGGSYPAILEIHGGPHAMYSNSFFHEFQLLAAQGYAVIYTNPGGSRGYGQSFTNVVLGDYGGRDYTDLLSAVDEAIRQFPFIDPERLGVTGGSYGGFMTNWIVGHTDRFRAAVTQRSISNWLSMYGVSDIGYSFTEDEVGGNPWDDFELLWRQSPLAYVQQINTPLLILHGEQDLRCPIEQGEQLFTALRRLGKPTQFVRFPASSHELSRKGHPQLRVERLQRITDWFVQHKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJJ3</accession>
    <name>E3EJJ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lacI1</name>
        <name evidence="6" type="ORF">PPSC2_12100</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371147.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24435"/>
    <dbReference type="EnsemblBacteria" id="ADO56543">
        <property type="protein sequence ID" value="ADO56543"/>
        <property type="gene ID" value="PPSC2_12100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2559"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_1_9"/>
    <dbReference type="OMA" id="FAEFMSG"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="37207" checksum="E5A140D87348FB66" modified="2011-01-11" version="1">MASIHEVAKQAGVSVATVSKVINNYSDVSSKTRNKVNKAIELLNYQPNVVARSLVKKRSWTVGMFLLDFFTNPFISELLDGLRKSLEDSGYDLLFLSPNLSNPDYTFTKHCISRNVDGVVMFGVDRTNQNFLDLLQAEMPTMMIDTDLLGPRTGYVTADNRIGAYLGVQHLVELGHKRIAFISGDLGCLVGQTRFSGYQEGLRSNDLPYYDQYVEVEKYSIEGGYKAMKRLLQLPEAPSGVICSSDYMATGAIEAIREIGMRVPDHISVVGFDNTFYAELSMPKLTTINQNITLMGMKAGEHLIRMIENPDYSPPTEIVPANLVVRDSTGEYKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJQ7</accession>
    <name>E3EJQ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386069.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0263"/>
    <dbReference type="EnsemblBacteria" id="ADO59655">
        <property type="protein sequence ID" value="ADO59655"/>
        <property type="gene ID" value="PPSC2_26865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5678"/>
    <dbReference type="HOGENOM" id="CLU_635917_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="431" mass="51344" checksum="A92242811CA8B633" modified="2011-01-11" version="1">MNNIVDEVFSETVEYLKRLGTRRYFSKLLERYVFYYNKGIYVHFNFISNSDQGCFECFERRYGLESFVANHLIQKKPRDTRMKIYDVRENTNRRVKACKDAQEEWYKVRRSLESNLSDSETKKVTDSQYNRVQKALRSIYEFHEQSSKEKLKRAERASRVVYAMDKHYKNASEEFKHAENLVLALLLEFYMTQLSKRIQAFFGQDKVIVRYPRKEIVKLFKERNNHNNYDFVDPERQFSVFERELLGFMDMAKKKFIIQVSKENFVYKLTSSETKDLFRLSVNPKGDVHDDPTVLEPLEQFLGKYAGFRLLIHSMAQIKNAFGDKVEAFQDIVKLTSLTYSKKFISRYMELEKEYFEKLKQEREHKPKWMGEEQAIQKMKAAFPAFQISSGMKEDSTMNFVMEHVAHSKERFYIHFIDSITNGTEVLKIGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJY1</accession>
    <name>E3EJY1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">5'-3' exonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_28180</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386414.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0611"/>
    <dbReference type="EnsemblBacteria" id="ADO60000">
        <property type="protein sequence ID" value="ADO60000"/>
        <property type="gene ID" value="PPSC2_28180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5976"/>
    <dbReference type="eggNOG" id="COG0258">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004675_1_5_9"/>
    <dbReference type="OMA" id="KDHDYLQ"/>
    <dbReference type="OrthoDB" id="1220182at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017108">
        <property type="term" value="F:5'-flap endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033567">
        <property type="term" value="P:DNA replication, Okazaki fragment processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09898">
        <property type="entry name" value="H3TH_53EXO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020046">
        <property type="entry name" value="5-3_exonucl_a-hlix_arch_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002421">
        <property type="entry name" value="5-3_exonuclease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036279">
        <property type="entry name" value="5-3_exonuclease_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020045">
        <property type="entry name" value="DNA_polI_H3TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038969">
        <property type="entry name" value="FEN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008918">
        <property type="entry name" value="HhH2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42646">
        <property type="entry name" value="PTHR42646"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01367">
        <property type="entry name" value="5_3_exonuc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02739">
        <property type="entry name" value="5_3_exonuc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00475">
        <property type="entry name" value="53EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00279">
        <property type="entry name" value="HhH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47807">
        <property type="entry name" value="SSF47807"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="53EXOc" evidence="2">
        <location>
            <begin position="1"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO60000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="347" mass="39725" checksum="CB861D5F5EFB5FDE" modified="2011-01-11" version="1">MNSLLLVDGSSLLTTSFFATAPLDYQKAKTPEEMAKTSKKLMQVDGVYTNGVYTMIDKLLKIIKNQNPKYLAIAWDLNRQTFRRDIYPEYKANRSETRPELKSQYPLAQEVLKEMGIAQFIYEGYEADDIIGTLSNKMSSEVPVYILTKDQDALQLVNERVRLWYMTNKAEEMYEQVGLNIKEFNLPEKVFEFTPLYVHEFYRVEPIQIIDRKAIEGDTSDNIPGVKGVGESSVVPLLNEFKSVEGIFDFLENNDELTVKTMIKELGIKRSPVKLLTQSSDTELVGKESALLSKRLATIDVDMACMQDVKLEDLYLQINEERKKDIFKRLAFNSLLDSVESTQARTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK91</accession>
    <name>E3EK91_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385832.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0024"/>
    <dbReference type="EnsemblBacteria" id="ADO59418">
        <property type="protein sequence ID" value="ADO59418"/>
        <property type="gene ID" value="PPSC2_27965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5926"/>
    <dbReference type="HOGENOM" id="CLU_2808421_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7252" checksum="FB1410D65A29443D" modified="2011-01-11" version="1">MGELIAPVLIIFNLSGVAIFVAILFRAYEKGHVGTIAFSAVGFVVNLLAVIVLTESHYDQLIKLSFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKA6</accession>
    <name>E3EKA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27895</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385847.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0039"/>
    <dbReference type="EnsemblBacteria" id="ADO59433">
        <property type="protein sequence ID" value="ADO59433"/>
        <property type="gene ID" value="PPSC2_27895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5911"/>
    <dbReference type="HOGENOM" id="CLU_572177_0_0_9"/>
    <dbReference type="OrthoDB" id="2063919at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168252" evidence="2">
        <location>
            <begin position="34"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="477" mass="53284" checksum="7603A36E3F5579B6" modified="2011-01-11" version="1">MSKKKKTAVAVSVGLVAAVLLSAGIYIWSNTGGSTKVNEPVEESGVASHVLSYTQDGVVSLYTLKQKKFIEEFDLKTLSKKAADEDSHDQQPTSTPAPQTIQKQVPPLVQSGDSYKDFVKVPVSVTKGGNAWEIQSKLTPHRNITVMLRLVMEVNHRTNLHPIYPGEKIIFLKEHKGEEIVKSKPVEKLESVVDQRSQQVVKKTTTAKNEKPKFLYYGSVEDKTLYAYSNSDKAIYRMKESAGKLQVINISKNEHYVTAEGLLVTSKRVLLFEKGTHKLQMIGLNDLNKMETLELEGQPSHYVVYGDSLYYTFGDKLGMLNLVNKEKKSVLLGDDSKELVVVDHKLYILNAFGAQMTNSVLMKVDPSDLHVDQLLELKTDESAILSKGETDELYVGRITKEKDLSGNVLKKNEITAINVKPLTMEKSTWFIPFGKESAGYDSHLYMLQNGKLNVYAVNDVKPKTSLDVKGEHFTILP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKH8</accession>
    <name>E3EKH8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386224.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59810">
        <property type="protein sequence ID" value="ADO59810"/>
        <property type="gene ID" value="PPSC2_26110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5498"/>
    <dbReference type="HOGENOM" id="CLU_2618743_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="9417" checksum="D824E3F41336FA13" modified="2011-01-11" version="1">MERDYRKEKMELDKKLEDIQDIQVVLHMLQEATDLIDRAKKRLMYNRKAKDLDIDHLIRNAHESLVECVDRIKNPDEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKT9</accession>
    <name>E3EKT9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0147"/>
    <dbReference type="EnsemblBacteria" id="ADO59540">
        <property type="protein sequence ID" value="ADO59540"/>
        <property type="gene ID" value="PPSC2_27390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5797"/>
    <dbReference type="eggNOG" id="COG4965">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_884709_0_0_9"/>
    <dbReference type="OrthoDB" id="417559at1239"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="254"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="283"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="36344" checksum="3CAF10FB2EF5379D" modified="2011-01-11" version="1">MHFHWLMFAITLFFFIGSSLFTMRGKNNFEKRKEQSKNLLRENVLKQRIEQIAEGRVRYSKRYAIETLCMQAGFPLTYAEYLMISVASALIVAIFVGMVMNNPILGIIFLIVGYMIPKQFITLRKNRRVVMMEKQIGSFMHMVIKRYETTREFSKALELSTIEFKGEEPLYTELRKTVLDINLGKPVTDSMDALARRTGNKYLARFSDYYKIASSIGTDEIRKKLLEQAYKQFEENRVNKQTTKKELATVVREAYIMLGSIPMFAIYQVMTNDKYIDFMTETFLGKVGSVIIIAVFMGAVWFINNKISAPIDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBN2</accession>
    <name>A0A0D5ZBN2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_04540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885877.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44190">
        <property type="protein sequence ID" value="AKA44190"/>
        <property type="gene ID" value="PPSC2_04540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.912"/>
    <dbReference type="HOGENOM" id="CLU_2524451_0_0_9"/>
    <dbReference type="OrthoDB" id="2183762at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025018">
        <property type="entry name" value="DUF3953"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13129">
        <property type="entry name" value="DUF3953"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="87" mass="9957" checksum="09E839D60CC8A57C" modified="2015-05-27" version="1">MFKKMDIYRILTLIFAVIAMVSSLLSLAYPDTYKHAYTIAQFFIGLVFLLSGISEFKAHRKSMAIMNFSVSLLTFFVFIFTLVVRTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC85</accession>
    <name>A0A0D5ZC85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iS4D</name>
        <name evidence="2" type="ORF">PPSC2_13775</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44258">
        <property type="protein sequence ID" value="AKA44258"/>
        <property type="gene ID" value="PPSC2_13775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2935"/>
    <dbReference type="HOGENOM" id="CLU_055261_9_3_9"/>
    <dbReference type="OrthoDB" id="2020052at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="14492" checksum="CBCC7C1E69E4813B" modified="2015-05-27" version="1">MVDALGYPLRFELTPGQDHDSVTGYRLLHELDFCPGEVLADRAYDTNAILELLQSRAITPVIPSKRNRRVKRPLDSETYKERHLIECFFNKVKNYRRLATRYEKTANMFMAFLTLLSIRLWLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCB6</accession>
    <name>A0A0D5ZCB6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44211">
        <property type="protein sequence ID" value="AKA44211"/>
        <property type="gene ID" value="PPSC2_07910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1656"/>
    <dbReference type="HOGENOM" id="CLU_2772061_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="7795" checksum="DC17EA6494DB1262" modified="2015-05-27" version="1">MDIAELVQYLNRMSSSISEIGDKTSSGLQNIEIRLSDLDSTFTMTNVLLFILIIVVALNTFLKWKNSKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCC5</accession>
    <name>A0A0D5ZCC5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44390">
        <property type="protein sequence ID" value="AKA44390"/>
        <property type="gene ID" value="PPSC2_28115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5960"/>
    <dbReference type="HOGENOM" id="CLU_2634783_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8625" checksum="4E58C3DC9678BA44" modified="2015-05-27" version="1">MSKNIKRGKGEMKPINTTFEMKKAPSRHERERACKSSCTKGVKKLIPLAHSYVSSQKGNTLKALKLHNSKGIESWSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCG2</accession>
    <name>A0A0D5ZCG2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44264">
        <property type="protein sequence ID" value="AKA44264"/>
        <property type="gene ID" value="PPSC2_13885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2965"/>
    <dbReference type="HOGENOM" id="CLU_2845728_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="7410" checksum="2AD57262F4330B44" modified="2015-05-27" version="1">MVYFQNEVNFTKATVSGLKLGVEDFIENLGETIRELRNDVASLRGDMYDDVIVNATFDPSPRNFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCQ2</accession>
    <name>A0A0D5ZCQ2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SAVED domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_26330</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886213.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44349">
        <property type="protein sequence ID" value="AKA44349"/>
        <property type="gene ID" value="PPSC2_26330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5546"/>
    <dbReference type="HOGENOM" id="CLU_749351_0_0_9"/>
    <dbReference type="OrthoDB" id="750847at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040836">
        <property type="entry name" value="SAVED"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18145">
        <property type="entry name" value="SAVED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="SAVED" evidence="2">
        <location>
            <begin position="160"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="376" mass="44419" checksum="68AE2C00DEE09DB5" modified="2015-05-27" version="1">MKNRFKQVIPIAMRFLKGRFEKKIIWSLISFGTLIIGQSFTQNWWINFVIDMYNDHFNRNMPYPVDSSQVWNVLLSLLAGGSLIVLAIYFYFRTKNREKLKPMLLIQHSSIQMISYSNINKDLSDYNLEQYPLNQLEEFKSMDRVHIYHALREQEKTINRIASRIDGSSGVEVAYMGLAHIPVTMLLGYQLSDKSSPMFYEWNQNELIWEQIESKPNFKFPILFLEKKDTQQEIQSTREVVVKIGITYPIGDEDIQELQFQNLNSYYLHLNPPHRNAVISSEQLKTYKKNFRDLLDQINQRYPQLQTIHLFYSGQPSLAYTLGSAISSRMDVDIWIYNHVRNESPKYKWGIKLPKENTSLELKINEMRVNIVQSEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E480</accession>
    <name>E3E480_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">[Acyl-carrier-protein] S-malonyltransferase</fullName>
            <ecNumber evidence="2">2.3.1.39</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fabD5</name>
        <name evidence="6" type="ORF">PPSC2_12450</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>holo-[ACP] + malonyl-CoA = CoA + malonyl-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:41792"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="EC" id="2.3.1.39"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.3.1.39" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371224.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2651"/>
    <dbReference type="EnsemblBacteria" id="ADO56620">
        <property type="protein sequence ID" value="ADO56620"/>
        <property type="gene ID" value="PPSC2_12450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2640"/>
    <dbReference type="eggNOG" id="COG0331">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030558_1_0_9"/>
    <dbReference type="OMA" id="EAYHNKA"/>
    <dbReference type="OrthoDB" id="1123553at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004314">
        <property type="term" value="F:[acyl-carrier-protein] S-malonyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.366.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001227">
        <property type="entry name" value="Ac_transferase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014043">
        <property type="entry name" value="Acyl_transferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004410">
        <property type="entry name" value="Malonyl_CoA-ACP_transAc_FabD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016036">
        <property type="entry name" value="Malonyl_transacylase_ACP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00698">
        <property type="entry name" value="Acyl_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00827">
        <property type="entry name" value="PKS_AT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55048">
        <property type="entry name" value="SSF55048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00128">
        <property type="entry name" value="fabD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_AT" evidence="5">
        <location>
            <begin position="7"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="403" mass="44846" checksum="56CB9E41EC85B308" modified="2011-01-11" version="1">MNRMALVFPGQGSQYVGMGATWHSGFAEADRLFEEAADILGYDLKALCIAGPMTKLSRTFYTQPALLTISVIAFRRYMHEIGIIPEFSAGHSLGEYSALVSSGVLSFGDALRLVQERGRFMEEAAMTKLGSMIAIRGAELGEVEECCRLYSTVDQPAAIACYNSPSQYVVSGHHTSVALAADELEQRGAQITRLQVSGPFHSPLMQPAADRLAAELQKYTLNEAKWPVISNVTAQPYRDLDSIRQGLILQMTHPVRWVQTVQYMMNHGVKQGIELGPRTVLKNLVREISPNIEVLSLDRDLDRFELGSRFSIRDWIACSLSLAVSTPNANWNEDEYRKGVILPVRRLEKLLRNLESGSSSPPASEQRQEILECICLVLQTKQVSEGERKAMLEQLRRDQDGAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E484</accession>
    <name>E3E484_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">resD1</name>
        <name evidence="9" type="ORF">PPSC2_12470</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56624.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905747.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2655"/>
    <dbReference type="EnsemblBacteria" id="ADO56624">
        <property type="protein sequence ID" value="ADO56624"/>
        <property type="gene ID" value="PPSC2_12470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2644"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="133"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="133"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56624.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="26954" checksum="94816102D59603E5" modified="2015-05-27" version="2">MQKKILVVDDDKDIVKLITKSLSYEGFETIPAYSGKEALCALKENHIDFIILDIMMPGMNGLDVCRSIRNSYNAPILFLSARDKDIDKIVGLEIGADDYMTKPFSIQELTSRIRANFRKVDRLLKEWNELSPNRERTDSPLILNDKTFEAFLNNRKLNLSTKEFQILYMLMHNPNNVLTRERIYEYVWGDEYGELNTVTVHIKNIRKKLGPEYDFIKTIWGIGYKYKERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z9</accession>
    <name>E3E4Z9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spore photoproduct lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">splB</name>
        <name evidence="2" type="ORF">PPSC2_15205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371797.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02825"/>
    <dbReference type="EnsemblBacteria" id="ADO57207">
        <property type="protein sequence ID" value="ADO57207"/>
        <property type="gene ID" value="PPSC2_15205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3246"/>
    <dbReference type="eggNOG" id="COG1533">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057301_0_0_9"/>
    <dbReference type="OMA" id="AYCYVPR"/>
    <dbReference type="OrthoDB" id="1341636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042601">
        <property type="term" value="C:endospore-forming forespore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003913">
        <property type="term" value="F:DNA photolyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904047">
        <property type="term" value="F:S-adenosyl-L-methionine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023897">
        <property type="entry name" value="Spore_PP_lysase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034560">
        <property type="entry name" value="Spore_PP_lysase_Bacilli"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00292">
        <property type="entry name" value="spore_photoproduct_lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04070">
        <property type="entry name" value="photo_TT_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Radical SAM core" evidence="1">
        <location>
            <begin position="89"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="354" mass="41275" checksum="172FAEC10AD6D7E9" modified="2011-01-11" version="1">MSTLERTPVQTRGTKPFMPDLVFFEPDALNYPKGQRIMDWVKAKDIPYRMTTSHNRITNLPGETEVEKYRMAKKTLVVGIRKTLTFDQSKPSAEYAIPISTGCMGHCHYCYLQTTLGAKPYIRIYVNTDDIISAAKGYIEERVPEITRFEAACTSDPVGLEHITESLGDLIRFMADEEFGRLRFVTKYHHVDPLLDIKHNGHTRIRFSINSDYVIKQFEPATSRFEERIEAAGKIARAGYPLGFIIAPIIWYDGWEAGYGELLRRLGETLPQHATKDLTFELIQHRFTKTSKAVIEKRYPKTKLEMDIEKRKKKWGRWGQNKYVYPDEQQNALREFITERIFEHFPLSRIEYFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E537</accession>
    <name>E3E537_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Serine/threonine protein kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371835.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03025"/>
    <dbReference type="EnsemblBacteria" id="ADO57245">
        <property type="protein sequence ID" value="ADO57245"/>
        <property type="gene ID" value="PPSC2_15375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3285"/>
    <dbReference type="eggNOG" id="ENOG5033811">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2371798_0_0_9"/>
    <dbReference type="OMA" id="NTFHLIK"/>
    <dbReference type="OrthoDB" id="1840764at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025942">
        <property type="entry name" value="SpoVIF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14069">
        <property type="entry name" value="SpoVIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="11067" checksum="74727ED1CA0C9D99" modified="2011-01-11" version="1">MSYQQYGISPQLVERIKLKMKNRVLKERVKQQIEGVTKADLQNKAKVRHLVKTTSAILNERLTATQEEQLTAFVLAQKIDPSNTFHLIKLWGMFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5C3</accession>
    <name>E3E5C3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rluD3</name>
        <name evidence="5" type="ORF">PPSC2_16505</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for synthesis of pseudouridine from uracil.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a uridine in RNA = a pseudouridine in RNA</text>
            <dbReference type="Rhea" id="RHEA:48348"/>
            <dbReference type="Rhea" id="RHEA-COMP:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:12069"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RluA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372069.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03840"/>
    <dbReference type="EnsemblBacteria" id="ADO57483">
        <property type="protein sequence ID" value="ADO57483"/>
        <property type="gene ID" value="PPSC2_16505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3524"/>
    <dbReference type="eggNOG" id="COG0564">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016902_4_4_9"/>
    <dbReference type="OMA" id="AHPSPGW"/>
    <dbReference type="OrthoDB" id="1714699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120159">
        <property type="term" value="F:rRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd02869">
        <property type="entry name" value="PseudoU_synth_RluA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006225">
        <property type="entry name" value="PsdUridine_synth_RluC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006224">
        <property type="entry name" value="PsdUridine_synth_RluC/D_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00005">
        <property type="entry name" value="rluA_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01129">
        <property type="entry name" value="PSI_RLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="4">
        <location>
            <begin position="35"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606225-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="35752" checksum="F15FFDF0F9537DEB" modified="2011-01-11" version="1">MNEVNENGEAIGLSYEDELEGESLEWTADSGNVKTRIDKYIAEEMKEVSRSQIQLWIGNGRVLVNGTAVKANYKLAEGDHIVLSVPEPESVDIMPENIPLDVVYEDSDVIVINKQRGLVVHPAPGHSSGTLVNALMYHCHDLSGINGELRPGIVHRIDKDTSGLLMAAKNDQAHASLAAQLKDHSVTRKYIALVHGHLSHDQGTVDAPIGRDSGDRKMFTVTERNSKHAVTHFLVIERLGDYTLLELQLETGRTHQIRVHMKFIGHPLVGDPMYGRSKGVRMEGQALHAAVLGFKHPTTGEYLEFSRPIPPDMEDVLTSLRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5C6</accession>
    <name>E3E5C6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372072.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03855"/>
    <dbReference type="EnsemblBacteria" id="ADO57486">
        <property type="protein sequence ID" value="ADO57486"/>
        <property type="gene ID" value="PPSC2_16520"/>
    </dbReference>
    <dbReference type="GeneID" id="66576742"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3527"/>
    <dbReference type="eggNOG" id="ENOG5032Z2B">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_155870_0_0_9"/>
    <dbReference type="OMA" id="LLWVNFI"/>
    <dbReference type="OrthoDB" id="2081708at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043723">
        <property type="entry name" value="DUF5665"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18910">
        <property type="entry name" value="DUF5665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="12660" checksum="4B90C61DA4CA683D" modified="2011-01-11" version="1">MNGEGAAIASEKGIAGKQAEKLSRVEKLVQAVSEQMERTRIADYALLLNKPWRLLWLNLISGVSRGIGIALGFTFFAATIIYVLQVLGALNLPIIGDYIADIVRIVQRQLELTTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F5</accession>
    <name>E3E5F5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372255.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04730"/>
    <dbReference type="EnsemblBacteria" id="ADO57674">
        <property type="protein sequence ID" value="ADO57674"/>
        <property type="gene ID" value="PPSC2_17390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3715"/>
    <dbReference type="eggNOG" id="ENOG5033DF4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2082520_0_0_9"/>
    <dbReference type="OMA" id="YYQLKQK"/>
    <dbReference type="OrthoDB" id="1686567at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="117" mass="13818" checksum="092323693975E159" modified="2011-01-11" version="1">MELENKVRRYYQLKQKQKEIEGELADLRNDITAHCAEQEVSDWEIGNYRVRIVQQHRKEYDHAKLYDALPDPQLWRLFSKPDSSKIASLLKLKVIADEQIKDAVSHKTVTLLQVDKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5G2</accession>
    <name>E3E5G2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Bifunctional cytochrome P450/NADPH--P450 reductase</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="9">Cytochrome P450</fullName>
                <ecNumber evidence="9">1.14.14.1</ecNumber>
            </recommendedName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="9">NADPH--cytochrome P450 reductase</fullName>
                <ecNumber evidence="9">1.6.2.4</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_17420</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Functions as a fatty acid monooxygenase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>NADPH + 2 oxidized [cytochrome P450] = H(+) + NADP(+) + 2 reduced [cytochrome P450]</text>
            <dbReference type="Rhea" id="RHEA:24040"/>
            <dbReference type="Rhea" id="RHEA-COMP:14627"/>
            <dbReference type="Rhea" id="RHEA-COMP:14628"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:55376"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="EC" id="1.6.2.4"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>an organic molecule + O2 + reduced [NADPH--hemoprotein reductase] = an alcohol + H(+) + H2O + oxidized [NADPH--hemoprotein reductase]</text>
            <dbReference type="Rhea" id="RHEA:17149"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:142491"/>
            <dbReference type="EC" id="1.14.14.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <cofactor evidence="9">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9 10">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">In the N-terminal section; belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.14.1" evidence="9"/>
    <dbReference type="EC" id="1.6.2.4" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372262.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04760"/>
    <dbReference type="EnsemblBacteria" id="ADO57681">
        <property type="protein sequence ID" value="ADO57681"/>
        <property type="gene ID" value="PPSC2_17420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3722"/>
    <dbReference type="eggNOG" id="COG0369">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2124">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001570_7_0_9"/>
    <dbReference type="OMA" id="WKKAHNI"/>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:aromatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="F:FMN binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003958">
        <property type="term" value="F:NADPH-hemoprotein reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Bifunctional_P450_P450_red"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003097">
        <property type="entry name" value="CysJ-like_FAD-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
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        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001094">
        <property type="entry name" value="Flavdoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001709">
        <property type="entry name" value="Flavoprot_Pyr_Nucl_cyt_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023173">
        <property type="entry name" value="NADPH_Cyt_P450_Rdtase_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00667">
        <property type="entry name" value="FAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Flavodoxin_1"/>
        <property type="match status" value="1"/>
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    </dbReference>
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        <property type="entry name" value="p450"/>
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    </dbReference>
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        <property type="entry name" value="Bifunctional_P450_P450R"/>
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    </dbReference>
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        <property type="entry name" value="FLAVODOXIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00371">
        <property type="entry name" value="FPNCR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="SSF48264"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6 9" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 9" id="KW-0274">FAD</keyword>
    <keyword evidence="2 9" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 9" id="KW-0288">FMN</keyword>
    <keyword evidence="9 10" id="KW-0349">Heme</keyword>
    <keyword evidence="9 10" id="KW-0408">Iron</keyword>
    <keyword evidence="9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 9" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5 9" id="KW-0521">NADP</keyword>
    <keyword evidence="7 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="12">
        <location>
            <begin position="489"/>
            <end position="628"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="13">
        <location>
            <begin position="667"/>
            <end position="900"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="176"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="10">
        <location>
            <position position="403"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR000209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000209-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO57681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1058" mass="119257" checksum="F84D113E0B9BF9BF" modified="2011-01-11" version="1">MTSTNSIPQPKTYGPLGNLPLIDTHAPVQSLVKLANEHGPIFRMDLPEGTNIYISGHKLVADACDESRFDKQVWAPLQKVRAFAGDGLFTSWTEEPNWRKAHQILLPSFSQRAMKGYHNMMLDLAVQLVQKWSRLNPDESVEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFVTSMTRALDEAMGQLQRLNLQNKLMLSKKKQFKHDIETMFSLVDSIIQERKTVGNQGEEDLLARMLEGKDPETGETLDDENIRYQIITFLIAGHETTSGLLSFAIYYLLKNPRTLTKAYEEVDRVLTDSLPSYTQVRELKYIRMILNEALRLWPTAPAFSLFAKEDTLLDGTYPLKKGDSVNVLIPKLHRDTEAWGEDVEEFRPERFEDPSAIPQDAYKPFGNGQRACIGQQFALQEATLVLGMVLKHFELIDHTHYELKVKETLTLKPGGFTIQVRPRSTQTTIMLPGAAQELHEKEEQKVAAPHAEKHDTSLLSLYGSNLGTAEGLAGELADLGRNWGFKSSIATLNDHVDHLPKEGVVLITTATYNGHPPDNADAFVEWLKEVDEGQLAGIRYAVFGCGDRNWASTYQRIPRMIDELMTAKGAKRLYDRGEGDASGDFEKDWEVWNHGLWPELLNAFGIEHSDTEPQDTSSLSIEFVSDVLSAPLAANYEAATAVVTVNRELHAAESERSTRHLEIQLPTGLSYREGDHLGVLPRNPALLVNRVMQRFKLQDQNYIVLRGSDRDAAHLPLDRPVSVGDLLTLSVELQEPATRAQLRQLASFTVCPPHKKEIEALLEDTTFDQEIRKKRVTMLDILEKYPACELPFENFISLLPPLKPRYYSISSSPLESENSASITVSVVRGPARSGQGEYLGIASNYLAQLQPDDPVVIFVRKPQSGFRLPEDPTVPVIMVGPGTGVAPFRGFLQTRHVLKERGEQLGEAHLYYGCRDPKLDYLYKQELQTWEQEGIVTVHTAFSRLPGQPKRYVQHVMNEGADTLIHLLDEGAHLYVCGDGSRMAPDVENTLCAAYADIHHTSKEEAQQWLDHLQQEKRYAKDVWTGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5J2</accession>
    <name>E3E5J2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aminoglycoside phosphotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">amgP</name>
        <name evidence="2" type="ORF">PPSC2_17565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57711.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324590.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04895"/>
    <dbReference type="EnsemblBacteria" id="ADO57711">
        <property type="protein sequence ID" value="ADO57711"/>
        <property type="gene ID" value="PPSC2_17565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3753"/>
    <dbReference type="eggNOG" id="COG3173">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083624_1_0_9"/>
    <dbReference type="OrthoDB" id="1457558at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="14"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57711.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="30053" checksum="96FED7476F9580E2" modified="2015-05-27" version="2">MIGELLGIGNTASVYEWGKTEVIKIFHDQSRSMHEAKKEAKNAEIINNLNLRAPNYSGLLEYEGTSCLIYEKIDGPTMLKQIEPTKLSVSHYAKLMAQLHFELHNIEIKFNSNLKTELTNKINTAEVIKEYEKQIAIDVLNVLPEGNALCHYDFHPGNIILSSNGPIIIDWMNVLVGNQAADVTRTSMMIQSHALPSNAPSWLIKSEYREFFNREYLREYLMLSGMNPKVLEEWMAPTLAARVCEVNGEDRNEVIDKLQTIIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E620</accession>
    <name>E3E620_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">PTS fructose transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">licR1</name>
        <name evidence="8" type="ORF">PPSC2_20060</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4289"/>
    <dbReference type="EnsemblBacteria" id="ADO58239">
        <property type="protein sequence ID" value="ADO58239"/>
        <property type="gene ID" value="PPSC2_20060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4276"/>
    <dbReference type="eggNOG" id="COG1762">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3711">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013442_5_1_9"/>
    <dbReference type="OMA" id="VSSWGKY"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00211">
        <property type="entry name" value="PTS_IIA_fru"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007737">
        <property type="entry name" value="Mga_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011608">
        <property type="entry name" value="PRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036634">
        <property type="entry name" value="PRD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016152">
        <property type="entry name" value="PTrfase/Anion_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002178">
        <property type="entry name" value="PTS_EIIA_type-2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013011">
        <property type="entry name" value="PTS_EIIB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05043">
        <property type="entry name" value="Mga"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00874">
        <property type="entry name" value="PRD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00359">
        <property type="entry name" value="PTS_EIIA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
        <property type="entry name" value="SSF52794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55804">
        <property type="entry name" value="SSF55804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63520">
        <property type="entry name" value="SSF63520"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51094">
        <property type="entry name" value="PTS_EIIA_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51099">
        <property type="entry name" value="PTS_EIIB_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="7">
        <location>
            <begin position="184"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="7">
        <location>
            <begin position="298"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-2" evidence="6">
        <location>
            <begin position="409"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-2" evidence="5">
        <location>
            <begin position="501"/>
            <end position="640"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="641" mass="73861" checksum="870E5724B9B59C19" modified="2011-01-11" version="1">MRIFDILRILVAEQMIKGEHLANALKVSSRTIRTDVKELNALLSRHGAAVKPLKGTGYRLEIQDEQAFHHLLKQLKDYENNVPHLLASSSEARHRFLIKKLLLTHAYVKLDDLAEMLYVSRSTLQNDLKEVRKLLSTYGLSLENRPYHGIRIKGNEAKLRYCISDYIFNRTDEIGGQQMPHPSLISNEELEFIREVILERIEYHDIQLSDIALNNLVIHIAIACKRIREERYVSYYPQEMKKIEAQKEFRVATEIVSALEQNMKHSFPLVEIAYIAVHLLGVRTVVRVHMDEVEIKKIIDKNIYELTIEILDRIDQQLNMNIQNDQELLIAFCLHLKPVLNRYQYGMNLRNPMLDEIKAHYPLAFEAGIIAAEVIKQRLHIHIEDNEIGYLAIHIGVAMERKKMEGTPKRCMIVCASGLGSAKLLYYKLQSVFGSRLEIVGTTEFYKLKQTPLDGLDFIISTIPISEPLSIPMIHVNTFLGSSDITKIEQTISESKLPAVQYVRKKLVFLQQKFDNKRQALEFMAEKIQEAGLVKGPLLQSVIEREAVSPTSFGNFVAIPHPLEPFADSTFWAICTLQKAIDWDGKPVQFICMLCIQRTKSEDLQSMYHILLNILNHEKLVQQLIRCKTYTEFVEVLHKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E668</accession>
    <name>E3E668_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">GTP cyclohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_13060</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + H2O = 2,5,6-triamino-4-hydroxypyrimidine + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:23436"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58614"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:137796"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>5-amino-6-(5-phospho-D-ribosylamino)uracil + H2O = 5,6-diaminouracil + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:55020"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:46252"/>
            <dbReference type="ChEBI" id="CHEBI:58453"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371357.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00750"/>
    <dbReference type="EnsemblBacteria" id="ADO56753">
        <property type="protein sequence ID" value="ADO56753"/>
        <property type="gene ID" value="PPSC2_13060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2781"/>
    <dbReference type="eggNOG" id="COG3236">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084247_1_0_9"/>
    <dbReference type="OMA" id="WMMAAKA"/>
    <dbReference type="OrthoDB" id="1726046at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd15457">
        <property type="entry name" value="NADAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012816">
        <property type="entry name" value="NADAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037238">
        <property type="entry name" value="YbiA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08719">
        <property type="entry name" value="NADAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143990">
        <property type="entry name" value="SSF143990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02464">
        <property type="entry name" value="ribofla_fusion"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NADAR" evidence="3">
        <location>
            <begin position="6"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="18684" checksum="AF4DEBEA9EB5F3EA" modified="2011-01-11" version="1">MEKFTFFYRSHSPFSQWYPCEFVVDGLEFNCAEQYMMLKKAQLFGDEEAALKIMQAPTPREQKARGRSVRGFDQSLWEANCQQIVYDGNYAKFTQNQNLLKHLLKTKGTTLVEASPTDTIWGVGLAENDARIRHRKLWRGTNWLGEILTNLREDLLQKED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E682</accession>
    <name>E3E682_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fumarate hydratase class II</fullName>
            <shortName evidence="3">Fumarase C</shortName>
            <ecNumber evidence="3">4.2.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Aerobic fumarase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Iron-independent fumarase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">fumC</name>
        <name evidence="6" type="ORF">PPSC2_13130</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(S)-malate = fumarate + H2O</text>
            <dbReference type="Rhea" id="RHEA:12460"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="EC" id="4.2.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Carbohydrate metabolism; tricarboxylic acid cycle; (S)-malate from fumarate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="3">There are 2 substrate-binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.2" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371371.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00805"/>
    <dbReference type="EnsemblBacteria" id="ADO56767">
        <property type="protein sequence ID" value="ADO56767"/>
        <property type="gene ID" value="PPSC2_13130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2795"/>
    <dbReference type="eggNOG" id="COG0114">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021594_4_1_9"/>
    <dbReference type="OMA" id="HDSMGEV"/>
    <dbReference type="OrthoDB" id="734949at2"/>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER01007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045239">
        <property type="term" value="C:tricarboxylic acid cycle enzyme complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004333">
        <property type="term" value="F:fumarate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006106">
        <property type="term" value="P:fumarate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01362">
        <property type="entry name" value="Fumarase_classII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00743">
        <property type="entry name" value="FumaraseC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005677">
        <property type="entry name" value="Fum_hydII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018951">
        <property type="entry name" value="Fumarase_C_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11444">
        <property type="entry name" value="PTHR11444"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10415">
        <property type="entry name" value="FumaraseC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00979">
        <property type="entry name" value="fumC_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Lyase_1" evidence="4">
        <location>
            <begin position="11"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="FumaraseC_C" evidence="5">
        <location>
            <begin position="406"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="97"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding (B site)" evidence="3">
        <location>
            <begin position="127"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="137"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="322"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="3">
        <location>
            <position position="186"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="316"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="317"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalytic activity" evidence="3">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF10415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="462" mass="50179" checksum="4AC82BF34A2E8D88" modified="2011-01-11" version="1">MKYRIEKDTLGEIKVPADRLWGAQTQRSKENFPIGSEKMPLEVIQAFAVLKKSAAISNYKLGKLSQEKQDAIIYAADEILAGRVDDHFPLVVWQTGSGTQSNMNVNEVIAHLGSQWLQEQGKDAKLHPNDDVNMSQSSNDTFPTALHVAGVIAVEDRLLPAIDKLKETFQQKSEQFKDIIKIGRTHLQDATPLTLGQEISGWYAMLDKSKRMIVDTVQYMKELAIGGTAVGTGINAHPEFGSRTSAEISGFTGKTFTSAPNKFHALTSHDEVVAVHGAIKALAADLMKIANDVRWLASGPRSGLGEITIPANEPGSSIMPGKVNPTQSEALTMVVTQVMGNDAAIGFAASQGNFELNVFKPVIIYNFLQSVHLLADSIIAFNDNCAVGIEPDLAKIEHNLNNSLMLVTALNPHIGYENAAKIAKLAHAEGLSLKEAALRSGLLTEEQFDQYVVPAHMIHPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6F5</accession>
    <name>E3E6F5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tar</name>
        <name evidence="8" type="ORF">PPSC2_18975</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372601.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06185"/>
    <dbReference type="EnsemblBacteria" id="ADO58024">
        <property type="protein sequence ID" value="ADO58024"/>
        <property type="gene ID" value="PPSC2_18975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4067"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="ETTDIFQ"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="373"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="392"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="463"/>
            <end position="713"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="749" mass="82036" checksum="598611226F4723AC" modified="2011-01-11" version="1">MGFRKKERNAAKRQPKKTDPMKGLKGSKVTTDKGEETVVMSSKDTPWVAKALRKCTYNLKRLLKPERYSKDFMHLVKNYNPIRSVGMKLFLIFFAAIMLFVVSLGMLSYYKAKSTIEQNAATAYQQTVQQTSEKLDIILERFQDTSTQVFFDTELSDQLQKAVKQDKNPFASFVAMGEVNKKLTNIAFTNKAIDSLYLYPEETSLAAMGTGTQKDVRQEAWFKDILKNKGMVWLPTQVNDNGSKTFRLARSMNSMSGLGGTYVLVMDLKASAVEDELKGVNLGSGSMISLVTDKGEFVGSNNESLAGGKTKLDYVSKLEGIEGNQIMEQVADGKEQSVLAVHNTLGTSKWILVGVVPVSELVRDARGILTTTWVFAAVAALIALFIGLWMVRLVARPLTHLKDLMIEGAKGNLQIRTKYKAQDEIGQLSESFDTMMEQITLLVEQTNASAQEVLNTATELSDASKKTAVSAKEIAAATEEIAHGATSLATEAERGSGLTGNISQQMDTVMTSNYEMSLVAQEVEQSSEKGTVQLRNLLSKTKVTEETTHALVGKVDELKQTTSDVFKVLDVLQNIAKQTNILSLNATIEAARAGTAGRGFMVVANEVRQLAEQSRQAIRTATGITNNIVNEMNETVQALSEVYPLFREQMGAVQETTDIFQSVQQQMGEFALRLGTVTASIHHLSESQTTLSEAMTNVSAVAEQSSATSQEVASLSNEQANIGNQLVGLSDKLEGVSVNLKEQLSRFTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Q7</accession>
    <name>E3E6Q7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NADH dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yumB</name>
        <name evidence="3" type="ORF">PPSC2_20390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372888.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07645"/>
    <dbReference type="EnsemblBacteria" id="ADO58317">
        <property type="protein sequence ID" value="ADO58317"/>
        <property type="gene ID" value="PPSC2_20390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4350"/>
    <dbReference type="eggNOG" id="COG1252">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021377_7_2_9"/>
    <dbReference type="OMA" id="DHCIFLD"/>
    <dbReference type="OrthoDB" id="403436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003954">
        <property type="term" value="F:NADH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006116">
        <property type="term" value="P:NADH oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="PTHR43706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="2">
        <location>
            <begin position="6"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="396" mass="43441" checksum="7F97589F69156E77" modified="2011-01-11" version="1">MSSIPKIVIVGAGYGGILTAQQLQKELKHNEATVTLINRHDYHYITTHLHMPAAGTDTIEHSRIPIAQLIDEFKVDLVKGTVKEIIPTEKKIVLEDGSLSYDYLVIGLGGEPETFGIPGMDQFALTIRSINSVRLIREHIEYQLALYKNDGKPGRLNFVVGGAGFSGIEFVAELADRLPQLAKAYDIDFNRIQIINVEAAPTALPGFDPELVEYAMDVLKRKGVNFRIGVPIKECLQDGVIVGEGEKIEACTVVWTGGIRGNGLIEKAGFEVVRGRVKVDDFLRAPGHDDIFIIGDSSLMFNPEGRPYPPTAQIAMQQGVLCAKNLAATLRKKELHKFVFSNKGTVASLGKGEAVAVVGKRKIKGWVAAQLKKIVDLRYLFIIGGIPLVLKKGRFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6T1</accession>
    <name>E3E6T1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">spr7</name>
        <name evidence="5" type="ORF">PPSC2_21270</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373052.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08500"/>
    <dbReference type="EnsemblBacteria" id="ADO58483">
        <property type="protein sequence ID" value="ADO58483"/>
        <property type="gene ID" value="PPSC2_21270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4520"/>
    <dbReference type="eggNOG" id="COG0791">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3103">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016043_13_1_9"/>
    <dbReference type="OMA" id="WYKIKLS"/>
    <dbReference type="OrthoDB" id="682655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000064">
        <property type="entry name" value="NLP_P60_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003646">
        <property type="entry name" value="SH3-like_bac-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00877">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08239">
        <property type="entry name" value="SH3_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00287">
        <property type="entry name" value="SH3b"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51935">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51781">
        <property type="entry name" value="SH3B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168875" evidence="2">
        <location>
            <begin position="29"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="SH3b" evidence="3">
        <location>
            <begin position="31"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="SH3b" evidence="3">
        <location>
            <begin position="148"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="NlpC/P60" evidence="4">
        <location>
            <begin position="252"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="396" mass="41381" checksum="EFB52435AD71A083" modified="2011-01-11" version="1">MRRRVMGMLMTSAALLAAIHVAPGQVDAAASTTASAGQKAVIQAAVKLRSGPSTTGDVVSFMKQGEAVTVLEKTNNYWYKVKTSDGVTGYTSSSDKYIKVGATSVAAAATPPVSRKTEASESAKTVSASVKNVSTKEASASVNSSAGQTKATIQTSVRLRAEASTSSEVLGYMNTGDVVTITDSSNAYWFKVTTADGTVGYVSSSPQYIRIGEGVVVQQAVASAAAPASDTTALPAVASPVSTVSLSSGDAAAAIEQVIDTGMTYLGTPYEYGSDRNSTATFDCSAFTRQIFRQAVGIQLPADSRSQGEWIKQNSQPNTDMTTLKRGDLLFFTNYNASSGAYTSLDNSSQTITHVAVYLGDNKLLHTFSVAAGGVKVTDFSKPWQDRFLFGGSVIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6T9</accession>
    <name>E3E6T9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fhuB11</name>
        <name evidence="8" type="ORF">PPSC2_21295</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373059.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E6T9"/>
    <dbReference type="STRING" id="1406.LK13_08525"/>
    <dbReference type="EnsemblBacteria" id="ADO58491">
        <property type="protein sequence ID" value="ADO58491"/>
        <property type="gene ID" value="PPSC2_21295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4527"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_1_9"/>
    <dbReference type="OMA" id="AMVYWSF"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="5"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="87"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="112"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="142"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="190"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="230"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="269"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="299"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="34766" checksum="7C83A2EEEB685968" modified="2011-01-11" version="1">MSKKLWSLIVVIVLLVAVMLYSAMTGSLKVNLSQLVTGLWTGTDDQVNVVKDLRLPRIIVAVMAGAALAVAGVLLQAVMKNPLADSGVIGISSGAALVSLIAVTIFPALYFWMPFFSFIGGALACLMVYGFSWKSGLHPIRLILIGVAVNAIFSGLGQSFNYRGSYAVTSINQVTTSTLSMKKWVDVEVIVTYGGIGLILAMLVFSWCNFLSLQDKTAKNLGLNVTRARLLISVIAVLLAATATAIAGVIAFIGLLVPHCARYLVGSDHKWLIPFSALCGGLLLLLADTLGRTVLAPNEIPASIIMAVIGGPFLIFLIRKADRTYGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Z0</accession>
    <name>E3E6Z0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">30S ribosomal protein S13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">rpsM</name>
        <name evidence="9" type="ORF">PPSC2_22305</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the universal ribosomal protein uS13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432560.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09770"/>
    <dbReference type="EnsemblBacteria" id="ADO58692">
        <property type="protein sequence ID" value="ADO58692"/>
        <property type="gene ID" value="PPSC2_22305"/>
    </dbReference>
    <dbReference type="GeneID" id="66575606"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4730"/>
    <dbReference type="eggNOG" id="COG0099">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_103849_1_2_9"/>
    <dbReference type="OMA" id="YRGLRHK"/>
    <dbReference type="OrthoDB" id="1772647at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01315">
        <property type="entry name" value="Ribosomal_S13_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027437">
        <property type="entry name" value="30s_Rbsml_prot_S13_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001892">
        <property type="entry name" value="Ribosomal_S13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_S13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019980">
        <property type="entry name" value="Ribosomal_S13_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018269">
        <property type="entry name" value="Ribosomal_S13_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10871:SF1">
        <property type="entry name" value="PTHR10871:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00416">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002134">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="SSF46946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03631">
        <property type="entry name" value="uS13_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00646">
        <property type="entry name" value="RIBOSOMAL_S13_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50159">
        <property type="entry name" value="RIBOSOMAL_S13_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0820">tRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="95"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="13954" checksum="12C326D22AA56D52" modified="2011-01-11" version="1">MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKETGISANTRVRDLTEDEVSKLRETIDKEVKVEGDLRREISLNIKRLTEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7B3</accession>
    <name>E3E7B3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_23595</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373504.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11100"/>
    <dbReference type="EnsemblBacteria" id="ADO58968">
        <property type="protein sequence ID" value="ADO58968"/>
        <property type="gene ID" value="PPSC2_23595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4995"/>
    <dbReference type="eggNOG" id="COG4099">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035499_3_0_9"/>
    <dbReference type="OMA" id="HPENTKN"/>
    <dbReference type="OrthoDB" id="1195966at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041172">
        <property type="entry name" value="EstA_Ig-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010126">
        <property type="entry name" value="Esterase_phb"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18435">
        <property type="entry name" value="EstA_Ig_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10503">
        <property type="entry name" value="Esterase_PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168034" evidence="2">
        <location>
            <begin position="31"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="domain" description="EstA_Ig_like" evidence="3">
        <location>
            <begin position="38"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="45094" checksum="76E5FCA989FF0283" modified="2011-01-11" version="1">MQKRRFALVLLSFVLLLTIFYPSSSSAAAAADVPAPQATLFTQVQPLGEVVSAVVLKYSTNIDGASLSTSSFQVQSVLNDVYTDRTVTGVYTNDTGAITNRSTHGKYVVIELDTQDKNASTLTYDSTSAVNRINPLNYYISQKKDIATSKKTVIPASTQTVKATDKVTPIVDDFQKNTFENKDGFKLNYFTFEPKVEPGKTYPLVVFLHGNGERGDGNGVNLLANAGAVTWASPEQQAKHPSFVIAPQSPIDLEHKFIWADEPRNSAVADLVRETALKYPIDTNRIYIVGISQGAMGTWRLLEKNLDLFAAGVPIAGLTNYEKAVNMYAPVDPAHVEVLKNVPIWAFHAADDTTVSPKNSEEMVAAIKVQSGNLIHFTEYEAGIIKPTGHFSWVPALQNQDMIEWLFAQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7X1</accession>
    <name>E3E7X1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Iron-sulfur protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yqfT</name>
        <name evidence="5" type="ORF">PPSC2_14240</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371603.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01895"/>
    <dbReference type="EnsemblBacteria" id="ADO57004">
        <property type="protein sequence ID" value="ADO57004"/>
        <property type="gene ID" value="PPSC2_14240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3040"/>
    <dbReference type="eggNOG" id="COG1142">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043374_3_0_9"/>
    <dbReference type="OMA" id="DMQRCIG"/>
    <dbReference type="OrthoDB" id="1762646at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13247">
        <property type="entry name" value="Fer4_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="107"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="209" mass="21881" checksum="E00C30A181CA35F1" modified="2011-01-11" version="1">MSGARNTLSRPTNRMGSADRTSAIASSFVVADGGQCIGCKACELACFAVHGQAGGIGASVGTVSVPVVPKVYVVRAGDTYVPVQCRHCENAPCAHACPVQAIRQEDGVVMIDEDRCIGCTSCVLACPFGAIEVSPVYRAGHVITQSGLTHRANRTALPRTAASKCDLCAETENGQPACVEACPNHVLRLANGISDSPPEPRREVFFPRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y4</accession>
    <name>E3E7Y4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ykrV1</name>
        <name evidence="3" type="ORF">PPSC2_14305</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371616.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01960"/>
    <dbReference type="EnsemblBacteria" id="ADO57017">
        <property type="protein sequence ID" value="ADO57017"/>
        <property type="gene ID" value="PPSC2_14305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3054"/>
    <dbReference type="eggNOG" id="COG0436">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_4_5_9"/>
    <dbReference type="OMA" id="YPHMPTG"/>
    <dbReference type="OrthoDB" id="417859at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="36"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="393" mass="42827" checksum="C0745CE166355E63" modified="2011-01-11" version="1">MTHFSIPSADVMKQLPTQFFATLVQNVNREIAAGHDVINLGQGNPDTPTPPHVVKALQESADNPLYHKYSPFRGYSFLKEAVVQRYQEDYGVTLDPESEVAILFGGKTGLVQLPQVLLNPGDLCLVPDPGYPDYWSGVALAKAEMSFLPLKEENRFLPDYEAIAEEDRRRAKLMFLNYPNNPTAATAPLSFYEDTVEFALRNGIVVASDFAYGAIGFDGERPVSFLQAEGAKDVGIEFYTLSKTYNMAGWRVGFALGNAKIISLINLLQDHIYVSLFGGIQAAAATALTSSQECVSQLVARYESRRNAFYDALGHIGWKAPRPSGSFFSWLPVPQGYSSASFADLLLREAKVAVAPGIGFGSGGEGYVRAGLLSSEARLTEAADRIGKLNLFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E888</accession>
    <name>E3E888_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ca(2+)/H(+) antiporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cax</name>
        <name evidence="7" type="ORF">PPSC2_15555</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371868.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03205"/>
    <dbReference type="EnsemblBacteria" id="ADO57280">
        <property type="protein sequence ID" value="ADO57280"/>
        <property type="gene ID" value="PPSC2_15555"/>
    </dbReference>
    <dbReference type="GeneID" id="66576869"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3322"/>
    <dbReference type="eggNOG" id="COG0387">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008721_2_2_9"/>
    <dbReference type="OMA" id="AAVMITC"/>
    <dbReference type="OrthoDB" id="988251at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015369">
        <property type="term" value="F:calcium:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004713">
        <property type="entry name" value="CaH_exchang"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004798">
        <property type="entry name" value="CAX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004837">
        <property type="entry name" value="NaCa_Exmemb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044880">
        <property type="entry name" value="NCX_ion-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31503">
        <property type="entry name" value="PTHR31503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01699">
        <property type="entry name" value="Na_Ca_ex"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00378">
        <property type="entry name" value="cax"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0050">Antiport</keyword>
    <keyword evidence="5" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-0109">Calcium transport</keyword>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="93"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="125"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="245"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="279"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="308"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="337"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="28"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="211"/>
            <end position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="356" mass="38168" checksum="4DB492ECAB19BF8D" modified="2011-01-11" version="1">MKKWLSPALLIATFALSAVAHYTHWNAIAQFVICAISVVFVAGFLGRATESVAHYAGQRLGGFLNATFGNAAELIIAIFLVKEGLYDMVKASLTGSIIGNLLLVLGASLFAGGLKYKVQNFNISLAGLSGSLMIVAVIALFVPAVFLNTHVITDSESDTLSLIVAGTLIVAYIAWLIFSMITHKDYLADVTEQKDEELPHEHAPVWSRNKSIAYLVLATVMVAFVSEWLVGTLEVFTTQFGLSELFVGAFLVAIIGNAAEHSAAILLAMKNKIGASVEIAVGSSLQIALFVAPVLIFVSYFMGNTMNIVFTTIELVAIAVAVFIAKSITQDGSTNWYEGLMLLVVYVLLGVSFFLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="79" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8K0</accession>
    <name>E3E8K0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="12 13">DNA primase</fullName>
            <ecNumber evidence="12">2.7.7.101</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 16" type="primary">dnaG</name>
        <name evidence="16" type="ORF">PPSC2_16815</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12 13">RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12 13 14">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="12 13 14">Binds 1 zinc ion per monomer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Monomer. Interacts with DnaB.</text>
    </comment>
    <comment type="domain">
        <text evidence="12">Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12 13">Belongs to the DnaG primase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.101" evidence="12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372132.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04150"/>
    <dbReference type="EnsemblBacteria" id="ADO57549">
        <property type="protein sequence ID" value="ADO57549"/>
        <property type="gene ID" value="PPSC2_16815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3588"/>
    <dbReference type="eggNOG" id="COG0358">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013501_3_3_9"/>
    <dbReference type="OMA" id="LMWPIRD"/>
    <dbReference type="OrthoDB" id="1071997at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003896">
        <property type="term" value="F:DNA primase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03364">
        <property type="entry name" value="TOPRIM_DnaG_primases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00974">
        <property type="entry name" value="DNA_primase_DnaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016136">
        <property type="entry name" value="DNA_helicase_N/primase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013264">
        <property type="entry name" value="DNA_primase_core_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037068">
        <property type="entry name" value="DNA_primase_core_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019475">
        <property type="entry name" value="DNA_primase_DnaB-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006295">
        <property type="entry name" value="DNA_primase_DnaG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036977">
        <property type="entry name" value="DNA_primase_Znf_CHC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030846">
        <property type="entry name" value="DnaG_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034151">
        <property type="entry name" value="TOPRIM_DnaG_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002694">
        <property type="entry name" value="Znf_CHC2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10410">
        <property type="entry name" value="DnaB_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08275">
        <property type="entry name" value="Toprim_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01807">
        <property type="entry name" value="zf-CHC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002811">
        <property type="entry name" value="DnaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00493">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00400">
        <property type="entry name" value="ZnF_CHCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01391">
        <property type="entry name" value="dnaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 12 13" id="KW-0235">DNA replication</keyword>
    <keyword evidence="10 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 12 13" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 12 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 12 13" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2 12 13" id="KW-0639">Primosome</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 12 13" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 12 13" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 12 13" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 12 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Toprim" evidence="15">
        <location>
            <begin position="263"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CHC2-type" evidence="12 14">
        <location>
            <begin position="43"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRNR" id="PIRNR002811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR002811-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO57549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="606" mass="69123" checksum="B8E51D6154859E86" modified="2011-01-11" version="1">MSAGQGNIPDDIIESVLQHHDIVDTVSKYVHLTKQGKYMKGLCPFHSEKTPSFTVTPDRQIFYCYGCGAGGNAIKFMMEIEGLSFPEAVRTMAEESHIPLGEWQGRDSSHQHPELDRLLQAYELTSKMYHFLLKNTEHGKPAMEYLRSRGFSDKIIDQFQIGYAPNRWDTIVQFLEKRSFDPVEMEKGGLISPRHEGDGYVDRFRDRIMFPIWNRNGKVIAFAGRILGEGQPKYLNSPETKLFNKSRTLYNLHHAKTSIRKLRQSVLFEGYGDVISAWEAGVQNGVAAMGTALTEHHATMLKGLCDEVIICYDGDRAGQAAALKNFPLLENAGLHVKVALVSDGMDPDDFIRQYGAERFQRQIIESAVSTVKFKLIYLKKNHILQEEEGRIAYSREALNVIAPLSSPTEREVYLREVSAEVKVDFETLKQECNLLRQSLQKKQNFGDNNENGWNNGRHKKGQVSTPNLLPAYHVAERRLLHWMMQDLEAAEYVEKHLGDAFNIEDHAAIAAYLYAYYAQGKLPDTSRFISSLQDDRLEKNVSSIMMMDAPGVWAPHILDDYIRQVRKFPLQEQLDLKREEMRTAERSGDFLRAAQIASEIIALERQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Q5</accession>
    <name>E3E8Q5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372344.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3810"/>
    <dbReference type="EnsemblBacteria" id="ADO57764">
        <property type="protein sequence ID" value="ADO57764"/>
        <property type="gene ID" value="PPSC2_17815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3807"/>
    <dbReference type="eggNOG" id="ENOG502ZXEF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_152466_0_0_9"/>
    <dbReference type="OrthoDB" id="2095354at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="16868" checksum="B7BB829F83A9224E" modified="2011-01-11" version="1">MNHSIQSKLMQLNEILSQNNIDHYYIYDYTSRPKLVLAGSFDFSYYHNIEITFYEVSFLSCPGGVFSIECFRLANDKELEMLKTVSYGFLEGPVICMEDQTFGTRFFIATESLDYELKTVFYYKRENLQPHESVAEWVEKDGKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8T8</accession>
    <name>E3E8T8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Nitrate transporter NarT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">narK</name>
        <name evidence="11" type="ORF">PPSC2_17975</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
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        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
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        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372377.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05295"/>
    <dbReference type="EnsemblBacteria" id="ADO57797">
        <property type="protein sequence ID" value="ADO57797"/>
        <property type="gene ID" value="PPSC2_17975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3841"/>
    <dbReference type="eggNOG" id="COG2223">
        <property type="taxonomic scope" value="Bacteria"/>
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    <dbReference type="HOGENOM" id="CLU_001265_14_0_9"/>
    <dbReference type="OMA" id="DAWWFMF"/>
    <dbReference type="OrthoDB" id="1217595at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015112">
        <property type="term" value="F:nitrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17341">
        <property type="entry name" value="MFS_NRT2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044772">
        <property type="entry name" value="NO3_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23515">
        <property type="entry name" value="PTHR23515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="43"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="67"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="93"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="127"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="156"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="242"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="266"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="291"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="323"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="356"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="10">
        <location>
            <begin position="5"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="398" mass="43852" checksum="A6BE050A516460C7" modified="2011-01-11" version="1">MIRKMQLPLQTLNLILGFMVWVIISSLMPFITEDIVIPPGKLAMVTAIPVVLGSILRIPLGYYANIFGARIVFLVSFVLLLFPVYYISEASTMTDLIIGGLFLGIGGAVFSVGVTSLPKYYPKERHGFVNGMYGVGNLGTAVTTFSAPIVATQVGWALTVKLYLILLLVFIVLNFFFGDRHETKVKTPIMEQIKGVYKNEKLWFFSLFYFITFGSFVAFTVYLPNFLVSNFELDKVDAGMRTAGFIAIATFFRPIGGWLADRFQPLFLLVGTFAVYTVAAILLAFSPDITLYTVGCLAIAVSAGIGNGVIFKLVPFYFNKQAGIVNGIVSMMGGLGGFFPPILLSTIHAATGQYSIGFMLLSQVALASLILVIWLYYQARFPVAAEQNHFEKQKELQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8V1</accession>
    <name>E3E8V1_PAEPS</name>
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        <submittedName>
            <fullName evidence="5">Iron-sulfur cluster repair di-iron protein</fullName>
        </submittedName>
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    </gene>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05345"/>
    <dbReference type="EnsemblBacteria" id="ADO57810">
        <property type="protein sequence ID" value="ADO57810"/>
        <property type="gene ID" value="PPSC2_18025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3852"/>
    <dbReference type="eggNOG" id="COG2846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076075_0_1_9"/>
    <dbReference type="OMA" id="ACTTWRV"/>
    <dbReference type="OrthoDB" id="1701106at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Hemerythrin-like"/>
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        <property type="entry name" value="RIC_family"/>
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        <property type="entry name" value="ScdA-like_N_sf"/>
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    </dbReference>
    <dbReference type="Pfam" id="PF01814">
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    </dbReference>
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    </dbReference>
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    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hemerythrin" evidence="4">
        <location>
            <begin position="82"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="27274" checksum="C85797E61D59D461" modified="2011-01-11" version="1">MSQLTEETWVADIVKEVPKTSDLFRKLRIDFCCGGKISLREAAASRGLHAGELLARVHEVEENQAQHKQMQPSSLEPKELIAYIQNEYHTKLCEELAALTPYITKLTRVHGERYSHLKRVNELYTLLKQKLTIHIQFKESLLFPLIQAFFQDSAFERVDALHFHLSELQEEHQAIVDILQELRLITNGFEPLQEACGTHRLVLKRLEDLEADIYNHILLENCTLVERTRQAQLHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E910</accession>
    <name>E3E910_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Xanthine permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pbuX</name>
        <name evidence="8" type="ORF">PPSC2_24720</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12215"/>
    <dbReference type="EnsemblBacteria" id="ADO59217">
        <property type="protein sequence ID" value="ADO59217"/>
        <property type="gene ID" value="PPSC2_24720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5239"/>
    <dbReference type="eggNOG" id="COG2233">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017959_8_2_9"/>
    <dbReference type="OMA" id="MCSAFAQ"/>
    <dbReference type="OrthoDB" id="1419334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015205">
        <property type="term" value="F:nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017588">
        <property type="entry name" value="UacT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006042">
        <property type="entry name" value="Xan_ur_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ncs2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03173">
        <property type="entry name" value="pbuX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01116">
        <property type="entry name" value="XANTH_URACIL_PERMASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="119"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="159"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="183"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="226"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="307"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="334"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="366"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="392"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="435" mass="45321" checksum="76ADAA1FBEEAC7AC" modified="2011-01-11" version="1">MLSKQKLFALGFQHVMAMYAGAIAVPLIVGGALHLTPAQMAYLVAADLFTCGIATLLQIMGTRFFGSRLPVILGCTFTAVGPIIAIASTSNLATAYGAIILSGIFVVLAAPLYGKLLRFFPTVVTGSVVTIIGLSLIPVAMNNVAGGQGSADFGQPRNLLLALVTLLVILLVNRVAKGFLRSISVLIGLFAGTVVAYVMGMVHFAPVADASWVSIAQPFYFGKPEFSIMAVCTMIIVNIVSMVESTGVYLAVGKAIDQKVEQKQIVNGLRSEGLAIMLGGIFNAFPYTAFSQNVGLISLTRVKSRNVIFAAGGIMVVLGLLPKLAALTTVIPNAVLGGAMIVMFGSVAASGMSILSEVDLRKESNLLIAACSIAVGLGSAVLPQMFDQLPSFAKMLLQNGIVSGSITAIVLNIVLARKQGESVKGVNVSEVPQKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9F6</accession>
    <name>E3E9F6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16980</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04315"/>
    <dbReference type="EnsemblBacteria" id="ADO57587">
        <property type="protein sequence ID" value="ADO57587"/>
        <property type="gene ID" value="PPSC2_16980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3626"/>
    <dbReference type="eggNOG" id="ENOG5032VE6">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_134920_0_0_9"/>
    <dbReference type="OMA" id="DESIHHQ"/>
    <dbReference type="OrthoDB" id="1869978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="124" mass="12995" checksum="C9FDA8AE52741CC7" modified="2011-01-11" version="1">MGEKNILAYFKSPEEAQGAARKLEALRVTDMSIDRFSRYPRQSTGNAGLPVFSGQINSLSSLTQGVEFTDRSPAILAAADPAASGMSDGGQGGPTGRDILLTAVVDESIHHQAMSIVEQAGGML</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J3</accession>
    <name>E3E9J3_PAEPS</name>
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            <fullName evidence="2">PpAX</fullName>
        </submittedName>
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        <name evidence="2" type="ORF">PPSC2_17150</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO57624">
        <property type="protein sequence ID" value="ADO57624"/>
        <property type="gene ID" value="PPSC2_17150"/>
    </dbReference>
    <dbReference type="GeneID" id="66576614"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3663"/>
    <dbReference type="eggNOG" id="COG2179">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056221_4_0_9"/>
    <dbReference type="OMA" id="VLNPYHI"/>
    <dbReference type="OrthoDB" id="1472357at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008962">
        <property type="term" value="F:phosphatidylglycerophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
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        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="PGPP1/Gep4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19288:SF25">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="YqeG_hyp_ppase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="19988" checksum="8A54CE5648E707BF" modified="2011-01-11" version="1">MFEMLMPKLRVNTVFDIDLEGLYAQGYRGIITDLDNTLVGAKAPNATPELVAWFEKVKQAGFKLVIVSNNNMDRVSVFATPLDIEFIHAARKPSNSSFRRAIRMMGLTPEETIMVGDQMLTDVLGGNRMGLHTVLVLPISIHDEGVMTRFNRRLERIALTRLRKKGLWLEEEKKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Q9</accession>
    <name>E3E9Q9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Threonine synthase</fullName>
            <ecNumber evidence="5">4.2.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">thrC</name>
        <name evidence="12" type="ORF">PPSC2_18210</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-homoserine = L-threonine + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10840"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57590"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="EC" id="4.2.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the threonine synthase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.1" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372428.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05535"/>
    <dbReference type="EnsemblBacteria" id="ADO57849">
        <property type="protein sequence ID" value="ADO57849"/>
        <property type="gene ID" value="PPSC2_18210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3890"/>
    <dbReference type="eggNOG" id="COG0498">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015170_1_0_9"/>
    <dbReference type="OMA" id="FGRIAFQ"/>
    <dbReference type="OrthoDB" id="428821at2"/>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004795">
        <property type="term" value="F:threonine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000634">
        <property type="entry name" value="Ser/Thr_deHydtase_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029144">
        <property type="entry name" value="Thr_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037158">
        <property type="entry name" value="Thr_synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004450">
        <property type="entry name" value="Thr_synthase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14821">
        <property type="entry name" value="Thr_synth_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00260">
        <property type="entry name" value="thrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00165">
        <property type="entry name" value="DEHYDRATASE_SER_THR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="12" id="KW-0456">Lyase</keyword>
    <keyword evidence="8 9" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0791">Threonine biosynthesis</keyword>
    <feature type="domain" description="Thr_synth_N" evidence="11">
        <location>
            <begin position="2"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="PALP" evidence="10">
        <location>
            <begin position="102"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="9">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00018679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR604450-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF14821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="463" mass="52189" checksum="C6BE02235DFDC7B3" modified="2011-01-11" version="1">MRYISTRGRVEAKGFIDTVLMGLADDGGLMVPEQIPTVSGATLEQWATLSYRELLLEVFALYINDEIPREDLEQLVERSYASFRHPEVTPVKKINDSLSILELFHGPTFAFKDVALQFMGEFYSYVSKKQNEIIHILGATSGDTGAAAIQGVRGKEGIKICILHPHQKVSKVQELQMTTVDDENVLNLSVKGNFDDCQKVIKDLFADLDFKAKHHLRAINSINFVRILAQTVYYFYAYFRAQESSGAKKINVSVPSGNFGNIFSGFLAKKMGLPIHKLIIATNENNILERFVKTGEYKPGDFKSTYSPSMDIQVASNFERYLYYFLGEDAAKVSEYMNKLKTEGRIVIGAEDLKRVQQDFEALGASNEQCLELIKKYKAEYDYLLDPHTACGIAAYEAYNGAGEVCVTFATAHPAKFDEAIRLVDIKQEFPAQIEQLFAKPQHQQVVEHDEAEIVRQLEAFYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9S5</accession>
    <name>E3E9S5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372444.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3913"/>
    <dbReference type="EnsemblBacteria" id="ADO57865">
        <property type="protein sequence ID" value="ADO57865"/>
        <property type="gene ID" value="PPSC2_18280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3909"/>
    <dbReference type="HOGENOM" id="CLU_1371047_0_0_9"/>
    <dbReference type="OrthoDB" id="1618756at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="199" mass="22870" checksum="3AAAFE401B915D80" modified="2011-01-11" version="1">MILTLDISNEEFDGIIDGDGEFTPTIFLNFPSDIRGIYEFELINTVIDIYNFKDQIQNQGLHVKDDSLFVFGKMKVRIEGVKGADFKLIEGNLLAGREQYYSWPYTIDSGDIVCKCGGKLSFLEDCYVALMIVTESKPKITLKFNIEETVPFDFMNSNSIEQANLKKVESKHMKSLGKLFDFNFFQEYFRSGRRAIKSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9T4</accession>
    <name>E3E9T4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase m23</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yebA5</name>
        <name evidence="3" type="ORF">PPSC2_18315</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372453.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3922"/>
    <dbReference type="EnsemblBacteria" id="ADO57874">
        <property type="protein sequence ID" value="ADO57874"/>
        <property type="gene ID" value="PPSC2_18315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3919"/>
    <dbReference type="eggNOG" id="COG0739">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074787_0_0_9"/>
    <dbReference type="OMA" id="HIHAQRP"/>
    <dbReference type="OrthoDB" id="1891666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M23" evidence="2">
        <location>
            <begin position="187"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="35975" checksum="285937975069C334" modified="2011-01-11" version="1">MFFYFVKMLLIPLILYWIMAYFPFKNRISWYIHTLFTSAYTFMILFINDWTEISYYLRPVCIVLFGCSLFRQMVTLRSFKFNGLNRKTRIFLSLYGLLAIYQVFICILFNISYITSTPKHEDAVDLAFPLKGGAYEVVNGGMSSSMNYHFSHRTLKYAVDITKLTPLGSRKGKFDNPESLKSYPIYNDSVYSPVEGRIIEVVDGVEDNVPNSLGRSNTNMIIIKHKEYNILLLHLKKNSLLVKKNDFVKVGQEIAKVGNSGYSSEPHLHIHAIKHDNKRDYFNGTSIPITFNGNYLKRNDLLLNQTLIFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9V3</accession>
    <name>E3E9V3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">spo0D</name>
        <name evidence="6" type="ORF">PPSC2_19345</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372661.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06545"/>
    <dbReference type="EnsemblBacteria" id="ADO58086">
        <property type="protein sequence ID" value="ADO58086"/>
        <property type="gene ID" value="PPSC2_19345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4128"/>
    <dbReference type="eggNOG" id="COG3290">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_095307_0_0_9"/>
    <dbReference type="OMA" id="YIRMNKH"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016120">
        <property type="entry name" value="Sig_transdc_His_kin_SpoOB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039506">
        <property type="entry name" value="SPOB_a"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14689">
        <property type="entry name" value="SPOB_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55890">
        <property type="entry name" value="SSF55890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="31"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="domain" description="SPOB_a" evidence="5">
        <location>
            <begin position="66"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF14689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="27838" checksum="0B803C0FF79B62A9" modified="2011-01-11" version="1">MFQRKRAPYLALGSILIPLVFSLLYPKALTIIILAVWAVAAACFGMWYTHRQVEHERKAALRSFERTAIATLNHHRHDWMNDLQVLYGYIRMNKHDKSAAYVETIKGRVSEDSKISKLGIPSLVFYLQSFRVNAGNLQLSVQVEEDLKLDAVMSPEDGESLASAVIQTVRAYQYGGGRSSWGEVRRLTLYFGMDQDDVIVRFEGSDIPADLNILKQVRSVLGSERLRTEKLPTGDMLQIRMQCQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA20</accession>
    <name>E3EA20_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HATPase_c domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_19660</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372725.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4203"/>
    <dbReference type="EnsemblBacteria" id="ADO58153">
        <property type="protein sequence ID" value="ADO58153"/>
        <property type="gene ID" value="PPSC2_19660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4192"/>
    <dbReference type="eggNOG" id="ENOG5030K46">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_472379_0_0_9"/>
    <dbReference type="OMA" id="SESLKWA"/>
    <dbReference type="OrthoDB" id="196112at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="266"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="HATPase_c" evidence="3">
        <location>
            <begin position="459"/>
            <end position="575"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="477"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="477"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="577" mass="66424" checksum="A85E70FCC0B6803D" modified="2011-01-11" version="1">MKQWALLRPSWQKLILYLIVLCVTVFLAAVLQWFVMRQFSGHLADIQNEQLQYEVQELSGSITERYAAWQAELKELSSSLGREILNQGTRQYAEGFKRESGSFYVLDEQYHVMAGRDNREMKSAVQQIKWLQNGCAISSFVTEDHQPAQYIACRIQGAQTGGFMVRTVDAEMLSGIIKSKPVNQHETLFYNGQFKIVASRNTPDINRTDITGVTRKLLEGNTGIVEDRGEKYGIGFSRIGEEALYISVKDISQDTAQRISSFRKQLWMVMALILMILWAMLVQFRKRIVKDAIVNNQVRDQRRDEDMRQQQDTYYLPLMQTIEQQLQELQEQTSRLTGGDDLKLLGFYQDLANRFEVASSQGKGASHEELEYFRELNGNFIQGRLRQESSLGELLTGVRSLRDELEEKMHDNSGISFTDMNEVLSESLKWANRSLNMKHIQVITRQEPVPSIAAQAPMLYKTIQGLLENAVEAMNRDGEQLEEQERGRTGLRSKRQSHMLKVSSRLEEAEIMIIIEDTGGGIDDKMRWSYFQPDYSQNAQEHTFSLYHMDAYLKTIGGRLKLRNTDQGLQAIVHLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA54</accession>
    <name>E3EA54_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome Caa3 oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ctaA</name>
        <name evidence="7" type="ORF">PPSC2_20530</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372916.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07785"/>
    <dbReference type="EnsemblBacteria" id="ADO58346">
        <property type="protein sequence ID" value="ADO58346"/>
        <property type="gene ID" value="PPSC2_20530"/>
    </dbReference>
    <dbReference type="GeneID" id="66575951"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4379"/>
    <dbReference type="eggNOG" id="COG1612">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041525_3_0_9"/>
    <dbReference type="OMA" id="YTGAYVR"/>
    <dbReference type="OrthoDB" id="1135592at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016653">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006784">
        <property type="term" value="P:heme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003780">
        <property type="entry name" value="COX15/CtaA_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02628">
        <property type="entry name" value="COX15-CtaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="69"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="125"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="207"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="267"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="34301" checksum="B0A7C1A00B49E127" modified="2011-01-11" version="1">MNSLNNKIRILKWLALVTCIVMFLATFGGGVVTRTDSGLGCGREFPLCNGKLVPAHTIASLIEFSHRSVSAMAGILSIASFVGFLLFMKHRKDLQLFSLLTLLFVIIQGAMGALAVIFSQSAAVMGLHFGFALIAFASATMMTLGAWQEHADSRYTPRLIPGRVSRGYRNFIWLSTIYTYIAVYSGALLSHSVIQKVVNIGGFISPLLLHQISAGLLFVIILAVGHYSYRYHPNHRDIRTLGVVSVVLIILQVVIGIILLYVNRPEIYMFIVLGHMLVIASLFSILAYLSYRVWQLSPDRKLVPTQAQRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA67</accession>
    <name>E3EA67_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yfhP</name>
        <name evidence="2" type="ORF">PPSC2_20595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372929.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07850"/>
    <dbReference type="EnsemblBacteria" id="ADO58359">
        <property type="protein sequence ID" value="ADO58359"/>
        <property type="gene ID" value="PPSC2_20595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4392"/>
    <dbReference type="eggNOG" id="COG1988">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067817_2_0_9"/>
    <dbReference type="OMA" id="TGWVFSE"/>
    <dbReference type="OrthoDB" id="903022at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007404">
        <property type="entry name" value="YdjM-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04307">
        <property type="entry name" value="YdjM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="37460" checksum="C18006537C9DA1F5" modified="2011-01-11" version="1">MDTATHFVMGVGLAGLAYTDPVVAGDPKLAAVILLATVVGSQAPDFDTLLRLKNNAAYIRNHRGLSHSIPFWLIWILSITGLICLIFRDVPPGHVALWVTIAVCLHVFTDLFNTYGTQAFRPFTNKWISWNIIHIFDPFIFGTHVAAIMLWVTGLVPPAPLFITLYVIIGLYYIWRTWSHFITRKAVRDMDNKRQEGDTYYIIPTVSWNRWHVVKAHQNGSYDIGGLNGKHLFWTKHATPSTHPAVEASTSYRDVQAFRYFSSFAVAEVEELEWGYIVRWGDVRYRHRRQYPFVAVVAMDKQFGLISSYIGWLSDEKMQKRLSLHTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA72</accession>
    <name>E3EA72_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Galactose mutarotase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yoxA</name>
        <name evidence="1" type="ORF">PPSC2_20615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372933.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07865"/>
    <dbReference type="EnsemblBacteria" id="ADO58364">
        <property type="protein sequence ID" value="ADO58364"/>
        <property type="gene ID" value="PPSC2_20615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4397"/>
    <dbReference type="eggNOG" id="COG2017">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052486_2_0_9"/>
    <dbReference type="OMA" id="ANDNHIH"/>
    <dbReference type="OrthoDB" id="710313at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008183">
        <property type="entry name" value="Aldose_1/G6P_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014718">
        <property type="entry name" value="GH-type_carb-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01263">
        <property type="entry name" value="Aldose_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="SSF74650"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="321" mass="37109" checksum="F671A522D15DAAD7" modified="2011-01-11" version="1">MKQVTKEHWNGYDTYVLHSGELEVTMIPRLGNNIISVRDLKLNRDIVRRPGEEELAFYLQKPYHFGLPILIPPGRIRKGQFEFDGVPYQFDRNTANDNHIHGLHRNQSWRCSDIEEDEDGCSVTTELLTESDPHWMEQYPIPFRLEMTYRLQGTVLSQTLRVTNLGEKTAPFGLGYHTWFMVDGEPERWRLKLPVNGVYEQDIEQLPTGVITSLDHLEQLSSGLSLKGTNLDTVLRATEGPAEAVLTRDDGYQIRYTADEQYFKYWVLYTKGECDQYLCIEPYTWLSDAPNFPDPVGDGGLIRLEPQQSIDLKTQIHIIYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAD3</accession>
    <name>E3EAD3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cytochrome D ubiquinol oxidase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">cydA3</name>
        <name evidence="13" type="ORF">PPSC2_21580</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373118.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08775"/>
    <dbReference type="EnsemblBacteria" id="ADO58551">
        <property type="protein sequence ID" value="ADO58551"/>
        <property type="gene ID" value="PPSC2_21580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4588"/>
    <dbReference type="eggNOG" id="COG1271">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030555_3_3_9"/>
    <dbReference type="OMA" id="FLINIAM"/>
    <dbReference type="OrthoDB" id="271551at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002585">
        <property type="entry name" value="Cyt-d_ubiquinol_oxidase_su_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30365">
        <property type="entry name" value="PTHR30365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01654">
        <property type="entry name" value="Cyt_bd_oxida_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006446">
        <property type="entry name" value="Cyt_quinol_oxidase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 12" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5 12" id="KW-0349">Heme</keyword>
    <keyword evidence="10 12" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="91"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="127"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="185"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="217"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="329"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="363"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="414"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR006446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="468" mass="52329" checksum="E544417259402E35" modified="2011-01-11" version="1">MDVLDLARLQFATTTILHFVYVPISIGLSLLVAIMETMYVIKKKDLYKKMAQFWGTFLLINFALGVVTGILQEFQFGMNWSDFSRFVGDVFGTPLAIEALLAFFLESTFIGLWVFGWERLSKTVHLICMWLVAIGTMLSALWILAANSFMQRPVGYGVVNGRAEMQDFAALLTNEQLLWEYPHTIFAAIATGAFLVAGISAWKLMHKKNMDFFKPSFKLSIIIALICAIAIPLFGHGQAQYLIKTQPMKMAASEALWGDSGDPAPWTVIANIDPDKQENTFEIKVPFALSFLSYSKFSGSVPGMKELQAQYEKTYGPGDYIPPVRTTFWSFRIMIAAGCAMIALALYGAYLSFRQKLEGSHRWFFRLMLWGISLPFIGNTAGWIMTEMGRQPWTVFGLLQTKDSVSPTVVAGEVLFSLIAFTTLYLILTGVLAFLFARTARKGPDIEPHQHTVIHDPFAQGGDSIVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAN5</accession>
    <name>E3EAN5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA-directed RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_22790</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373332.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4852"/>
    <dbReference type="EnsemblBacteria" id="ADO58793">
        <property type="protein sequence ID" value="ADO58793"/>
        <property type="gene ID" value="PPSC2_22790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4826"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_4_9"/>
    <dbReference type="OMA" id="RYCHNIL"/>
    <dbReference type="OrthoDB" id="1914729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="2">
        <location>
            <begin position="32"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="3">
        <location>
            <begin position="121"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="191" mass="22918" checksum="91EBB0E2ECE670F6" modified="2011-01-11" version="1">MEKLNTDNQNTDINLVIEQVQAGDKQAYTHIIRRYQQQIFLYCYYLLKNREEAEDAAQEIFIRGLEHIHHFVPTVSFSAWLYKIAQNHCTDLLKRNARTFKSFIQYKLNLKQQPIHEYTNLIHELLDQLTLKDRQILLLRSLEDYNYEEIATIMGLKSSTIRKRYERLRKKLINYNEKGGKQIEHSFKPGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAP6</accession>
    <name>E3EAP6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">minJ</name>
        <name evidence="2" type="ORF">PPSC2_22830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373343.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10305"/>
    <dbReference type="EnsemblBacteria" id="ADO58804">
        <property type="protein sequence ID" value="ADO58804"/>
        <property type="gene ID" value="PPSC2_22830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4835"/>
    <dbReference type="eggNOG" id="COG0265">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051142_1_0_9"/>
    <dbReference type="OMA" id="EHHELGI"/>
    <dbReference type="OrthoDB" id="1818090at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="194"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="225"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="256"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="438" mass="48325" checksum="D31D0E6E730D0ACD" modified="2011-01-11" version="1">MDLEWALQWGWSVLNACLYLLLQPFYYISILIVALGYRRQMLLERKLFHTRIHSWAAETWRVVWSGLLAGMALSALGMFVSVHLNPTSIVCLWIATLLLMLVRVRYLCLAYSVGLLGVVQFFLNVASGWQPGGALGTSVAAIRGLDIPALLVLVAVLHVAEALLVRWQGGKAAMPLFVEGKRGRLVGGYRMEDLWPIPLLLLVPAQGGFMLPWTPLFGGDAGTGYMLAALPVLMGFSSVTLGQLPRQKAVLTSNRLLLYSVALLLLSLLAAWWSPLILLSALFSFLAHEALIWYGNIEESRLSPMFVHPEQGMRVLAVLPDSPATAMGILPGEAIYRVNGMVVNSRAELHQALRINSAFCKLEVRNLQGESKFVQRGMYDGDHHQLGVVLAPDEHAGWAVSIQPASIYRIVAMHIGARRRKAEQASKAESTHLDTMDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBA4</accession>
    <name>E3EBA4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fe-S cluster assembly protein SufB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yurU3</name>
        <name evidence="3" type="ORF">PPSC2_20965</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0051 (ycf24) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373005.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08195"/>
    <dbReference type="EnsemblBacteria" id="ADO58436">
        <property type="protein sequence ID" value="ADO58436"/>
        <property type="gene ID" value="PPSC2_20965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4471"/>
    <dbReference type="eggNOG" id="COG0719">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026231_0_1_9"/>
    <dbReference type="OMA" id="SIQSYPT"/>
    <dbReference type="OrthoDB" id="635721at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010231">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000825">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037284">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045595">
        <property type="entry name" value="SufBD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01458">
        <property type="entry name" value="SUFBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19295">
        <property type="entry name" value="SufBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101960">
        <property type="entry name" value="SSF101960"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01980">
        <property type="entry name" value="sufB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SufBD_N" evidence="2">
        <location>
            <begin position="127"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="465" mass="52261" checksum="28BE7B299BA0DBE7" modified="2011-01-11" version="1">MAKKAPDMGEYKYGFRDKHQSIFQSGKGLTEEIVREISRIKEEPEWMLNFRLKALNQFYKMPMPEWGADLTGLSLDDIQYYVRPSEKQGKTWEEVPSEIKATFDKLGIPEAEQKFLAGVSAQYESEVVYHSMQKELEDQGVIFLDTDTALKQYPEVFKQYFGTIIPPADNKFAALNSAVWSGGSFVYIPKGVQCEVPIQGYFRINSENMGQFERTLIIAEEGSFVHYVEGCTAPIYSTSSLHSGVIEIICRKDSRVRYTTIQNWAPNIYNLVTQRAVVEENATMKWVDGNIGSKVTMKYPAVLLKGRGAKGSILSIAVAGKDQHQDAGAKVIHLAPETTSTIISKSISKQGGKVNYRGLSSFSRDSAGSKSNIKCDTLILDNMSTSDTIPYNEIKNDQITLEHEATVSKVSEEQLFYLMSRGLTEQDATQMIVMGFIEPFTKELPMEYAVEMNRLIQFEMEGSIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBG3</accession>
    <name>E3EBG3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Threonine aldolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ltaE</name>
        <name evidence="4" type="ORF">PPSC2_21990</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373203.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09140"/>
    <dbReference type="EnsemblBacteria" id="ADO58637">
        <property type="protein sequence ID" value="ADO58637"/>
        <property type="gene ID" value="PPSC2_21990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4677"/>
    <dbReference type="eggNOG" id="COG2008">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049619_1_0_9"/>
    <dbReference type="OMA" id="ETDCEVF"/>
    <dbReference type="OrthoDB" id="1124266at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001597">
        <property type="entry name" value="ArAA_b-elim_lyase/Thr_aldolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01212">
        <property type="entry name" value="Beta_elim_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_elim_lyase" evidence="3">
        <location>
            <begin position="30"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="345" mass="38618" checksum="0A0EFBD6C13C4CD7" modified="2011-01-11" version="1">MIRFECDYTEGAHERILQRLLETNEEQTPGYGMDDHCEKARAYIKKACDSENADVHFLVGGTQTNTTVISSILRPHQGVIAATSGHIAVHETGAIEAIGHKVLTLPSEDGKIRGEQVKELYDAHWSDSAPEHCVQPGMVYISQPTENGTIYSRSELEVLSKVCREYGLPLFIDGARLGYGLVAEDSDVSLADIAMLCDVFYIGGTKIGAMMGEAVVILNDALKKDFRYMIKQKGGLLAKGRMLGIQFETLFEEGLYFEISKHAIHMAMLLQKGLSEQGFSFLYHSTTNQQFPIISDRILQALSEKYTYSFWEKVDDTHTAVRFCTSWATKKENIEMLLQDIKALQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBJ1</accession>
    <name>E3EBJ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-alanyl-D-alanine carboxypeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">adp3</name>
        <name evidence="3" type="ORF">PPSC2_22100</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373231.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4722"/>
    <dbReference type="MEROPS" id="S12.003"/>
    <dbReference type="EnsemblBacteria" id="ADO58665">
        <property type="protein sequence ID" value="ADO58665"/>
        <property type="gene ID" value="PPSC2_22100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4705"/>
    <dbReference type="eggNOG" id="COG1680">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020027_2_3_9"/>
    <dbReference type="OMA" id="HTGGIDG"/>
    <dbReference type="OrthoDB" id="537440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004180">
        <property type="term" value="F:carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168735" evidence="1">
        <location>
            <begin position="33"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-lactamase" evidence="2">
        <location>
            <begin position="62"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="385" mass="42117" checksum="F66A670701E98707" modified="2011-01-11" version="1">MKKHCQITSTGLVLLMIGSFLLYTTPTSIVKAEPTQNVSSLLQTSTQRDCTSAKQAMRNTLQLGYPGILAEIYKSGKTWSYAAGIADLRAKKPMKTDFRFRIGSVTKTFIATVLLQLSEENRLNLDDPIEKWLPGVIQGNGYDGNQITIRQILNHTSGIADYVNSKDFDYTDTKKSYTAEEFVKMGISLPPDFAPGKGWSYSNTGYVILGILIEKVTGNSYAEEVENRIIEPLDLSNTFLPGNSSVIPGTKHARGYFQLDGASELKDVTYINPGSSDGDMISTADDLNKFFSYLLSGKLLKEQQLKQMLTTVPTDREGTGYGLGIFETKLPNGVSIWGHKGSVLGFTTFAGGTLGGKHTLAVNLNSLKADSPDPFKNILLAEFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBJ5</accession>
    <name>E3EBJ5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">Phosphoglucosamine mutase</fullName>
            <ecNumber evidence="6 8">5.4.2.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 13" type="primary">glmM</name>
        <name evidence="13" type="ORF">PPSC2_22120</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 8">Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 8">
            <text>alpha-D-glucosamine 1-phosphate = D-glucosamine 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:23424"/>
            <dbReference type="ChEBI" id="CHEBI:58516"/>
            <dbReference type="ChEBI" id="CHEBI:58725"/>
            <dbReference type="EC" id="5.4.2.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="PTM">
        <text evidence="6">Activated by phosphorylation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.10" evidence="6 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373235.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09610"/>
    <dbReference type="EnsemblBacteria" id="ADO58669">
        <property type="protein sequence ID" value="ADO58669"/>
        <property type="gene ID" value="PPSC2_22120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4709"/>
    <dbReference type="eggNOG" id="COG1109">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016950_7_0_9"/>
    <dbReference type="OMA" id="PHNPEPL"/>
    <dbReference type="OrthoDB" id="1265792at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008966">
        <property type="term" value="F:phosphoglucosamine mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05802">
        <property type="entry name" value="GlmM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01554_B">
        <property type="entry name" value="GlmM_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005844">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005845">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005846">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005843">
        <property type="entry name" value="A-D-PHexomutase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036900">
        <property type="entry name" value="A-D-PHexomutase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016066">
        <property type="entry name" value="A-D-PHexomutase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005841">
        <property type="entry name" value="Alpha-D-phosphohexomutase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006352">
        <property type="entry name" value="GlmM_bact"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02878">
        <property type="entry name" value="PGM_PMM_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02879">
        <property type="entry name" value="PGM_PMM_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02880">
        <property type="entry name" value="PGM_PMM_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00408">
        <property type="entry name" value="PGM_PMM_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00509">
        <property type="entry name" value="PGMPMM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55957">
        <property type="entry name" value="SSF55957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01455">
        <property type="entry name" value="glmM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00710">
        <property type="entry name" value="PGM_PMM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 6 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 6 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_I" evidence="10">
        <location>
            <begin position="3"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_II" evidence="11">
        <location>
            <begin position="158"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_III" evidence="12">
        <location>
            <begin position="257"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_IV" evidence="9">
        <location>
            <begin position="373"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphoserine intermediate" evidence="6">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <feature type="binding site" description="via phosphate group" evidence="6">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="Phosphoserine" evidence="6">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="446" mass="48087" checksum="AA4457EA8B907AA6" modified="2011-01-11" version="1">MGKYFGTDGVRGIANQELTAELAYSIGRCGGYVLAGNVEKPTVVIGMDTRISGLMLESALVAGLLSIGANVVRLGIVSTPGVAYLTRQLKADAGVMISASHNPVEDNGIKFFGGDGFKLTDETELKIEELMDAKEDQLPRPIGSGLGTVVVDEHSRYDYLEFLKTTISHSFEGLKIVLDCANGAAYELAPKLFADLGAEVHTIGAEPNGLNINDHCGSTHPEKLKEEVRRLKADIGLAFDGDADRLIAIDENGEEVDGDYILCICGDAMNRAGKLKDSTIVSTVMSNIGFYKATEKLALKTAKTAVGDRYVMEEMRRGGFNLGGEQSGHVIFLDHNTTGDGMLTGIQLVDTLKASGKKMSELKSLMKQYPQVLVNVRVQDKRNYEGNPAIAEAIEQVEQQLGDNGRVLVRASGTESLIRVMAEGPDKDELEQFVGQIVDVVKKELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBT3</accession>
    <name>E3EBT3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yetL3</name>
        <name evidence="2" type="ORF">PPSC2_24010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373592.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5119"/>
    <dbReference type="EnsemblBacteria" id="ADO59057">
        <property type="protein sequence ID" value="ADO59057"/>
        <property type="gene ID" value="PPSC2_24010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5080"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_3_9"/>
    <dbReference type="OMA" id="FHNDSIR"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="26"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="18883" checksum="C5F1DEBC152AA19D" modified="2011-01-11" version="1">MNFNFHNDSIRGVLRSFGHEDAEVDNIETFVTFARLANGIFREMDTDLTKLGASQGRIIVLSLLHCHAPHRMTPSELAEKADVTRGTMTGLIDGLERDGMIERVAHESDGRMVTVGLKEAGRELLSKIVPYYTKLIRSCMSEFTPQDHKMMKGLLGKMKGGFEQSLPKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECL0</accession>
    <name>E3ECL0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yfhR1</name>
        <name evidence="3" type="ORF">PPSC2_03970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369418.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16775"/>
    <dbReference type="EnsemblBacteria" id="ADO54782">
        <property type="protein sequence ID" value="ADO54782"/>
        <property type="gene ID" value="PPSC2_03970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.789"/>
    <dbReference type="eggNOG" id="COG1073">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029375_6_2_9"/>
    <dbReference type="OMA" id="YIGMGWH"/>
    <dbReference type="OrthoDB" id="721431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="AB hydrolase-1" evidence="2">
        <location>
            <begin position="107"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="345" mass="38858" checksum="87F36FD4B91F76B9" modified="2011-01-11" version="1">MISTSQRNAQLQTAVQEPSTPLFNPRMLRFKHVVIALLLSVVFFLLFCFIALHAYIAWVLTNPTVAPLYSNPMQAKGMPYEEVSFPAKDGSRMVQGWYIPADQSRKTIIFSHGYGANREESWIPMYDLAHYAHSLNFNVVMFDYGFASQNSKAVATGGKAESQQLLGAIQLAKQRGSSEIIVWGFSMGAGTALQAGLQTKDVDAMILDSTFLLEPDTLYHNIHNQINLPRHPSLEILELLFPVLNGTSLHQIPYQEVKKEDYPFPIMFVHGTQDEKAPYPIAEKLAANQTNPLSSVWIVKNGIHELIFREHPREYLRRVSTFLSSVQELEDKKTTATAQKLTTTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECR5</accession>
    <name>E3ECR5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE9</name>
        <name evidence="2" type="ORF">PPSC2_01830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368999.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0375"/>
    <dbReference type="EnsemblBacteria" id="ADO54359">
        <property type="protein sequence ID" value="ADO54359"/>
        <property type="gene ID" value="PPSC2_01830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.368"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049344_6_0_9"/>
    <dbReference type="OMA" id="YDQHRPE"/>
    <dbReference type="OrthoDB" id="1687413at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="49"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31093" checksum="D7AB8A48FF56717F" modified="2011-01-11" version="1">MIPEGNLQSNVDRFNGFADNYDQHRPEAPSLVVEIISRYLDRNVALVADIGCGTGLSTFIWKDTARRIVGIEPNPDMRGIAQRKLERAGTTMTGTISFESGFSNNLPFEDGTVDVITCSQSFHWMDPESTLQEAGRVLAQGGVFAAFDCDWPPVLQWQIEQAYTELITKADTVLEQEAPVEQQAHKWSKDQHLANLHHSGQFRYIREIVFHNREQCDAARYTGLALSQGGIQSLFKLGNRTLDDDIARFVKLVENHFEGRTLDILFSYRMRIGIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECX1</accession>
    <name>E3ECX1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphoribosylformylglycinamidine synthase subunit PurL</fullName>
            <shortName evidence="6">FGAM synthase</shortName>
            <ecNumber evidence="6">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Formylglycinamide ribonucleotide amidotransferase subunit II</fullName>
            <shortName evidence="6">FGAR amidotransferase II</shortName>
            <shortName evidence="6">FGAR-AT II</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Glutamine amidotransferase PurL</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Phosphoribosylformylglycinamidine synthase subunit II</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">purL</name>
        <name evidence="10" type="ORF">PPSC2_04240</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Monomer. Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the FGAMS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369474.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17055"/>
    <dbReference type="EnsemblBacteria" id="ADO54840">
        <property type="protein sequence ID" value="ADO54840"/>
        <property type="gene ID" value="PPSC2_04240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.844"/>
    <dbReference type="eggNOG" id="COG0046">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003100_0_1_9"/>
    <dbReference type="OMA" id="FIEPYQG"/>
    <dbReference type="OrthoDB" id="26038at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00420">
        <property type="entry name" value="PurL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010074">
        <property type="entry name" value="PRibForGlyAmidine_synth_PurL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041609">
        <property type="entry name" value="PurL_linker"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43555">
        <property type="entry name" value="PTHR43555"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02769">
        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18072">
        <property type="entry name" value="FGAR-AT_linker"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001587">
        <property type="entry name" value="FGAM_synthase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01736">
        <property type="entry name" value="FGAM_synth_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 6" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FGAR-AT_linker" evidence="9">
        <location>
            <begin position="17"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS" evidence="7">
        <location>
            <begin position="92"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="8">
        <location>
            <begin position="210"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS" evidence="7">
        <location>
            <begin position="449"/>
            <end position="566"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="8">
        <location>
            <begin position="580"/>
            <end position="717"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="102"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="320"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="125"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="276"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="504"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="541"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="542"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="544"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF18072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="747" mass="79882" checksum="D63396DEDFFB3DE8" modified="2011-01-11" version="1">MAQQVSAKEPTAEQVAEHKLYQQMGVSDSEYALICDFMGRQPNYTEIGVFSVMWSEHCAYKNSKPLLRRFPTSGPRVLMGPGEGAGIVDIGDNQAVVFKIESHNHPSAVEPFQGAATGVGGIIRDIFSMGARPVAVLNSLRFGKLESDRVKYLFEHVVSGIAGYGNCIGIPTVGGEVVFDESYEGNPLVNAMCVGLIDHDKIQRGVAKGVGNPVFYVGPPTGRDGIHGATFASVELTEESEANRTAVQVGDPFMEKLVMESCLELIDSGIVLGIQDMGAAGLTCSSAEMASKAGNGLELYLDQVPQREEGMTPYEMMLSESQERMLFVVEPKDEAQALEIFERWGVICAKVGKVTDDGRLRLFHHGEVVGDMPVTALVDECPIYDKPSEVPAYYEQNAAVDTLRYPEVTDLNGALKKVLSSPSVASKKWVYEQYDYMVRTSTAVRPGSDAAVVTVRGTRKGLAMTTDCNGRYVYLDPEVGGRIAVSEAARNIVCSGGEPLAITDNLNFGNPEKPDIFWQMEKAVDGMAEACCVLDTPVIGGNVSLYNENAKGAIYPTPVVGMVGLVHDTDHITTQGFKAEGDVIFLVGETKAELGGSEFQAVVHGVSEGRPPELDLNVEKKLLTAVLGAIQAGLVQSAHDLAEGGLAVALAESGISGGLGAQVNVETSLRPDHALFSESQSRILLSASPDKASALEAHLRGLEVPVTVLGKVEGSQLTVEVNGQPALNEAVASLKQIWEDVIPCLMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED42</accession>
    <name>E3ED42_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">L-serine dehydratase</fullName>
            <ecNumber evidence="1">4.3.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sdhA1</name>
        <name evidence="4" type="ORF">PPSC2_02160</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-serine = NH4(+) + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:19169"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="EC" id="4.3.1.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron-sulfur dependent L-serine dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.17" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369039.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14925"/>
    <dbReference type="EnsemblBacteria" id="ADO54399">
        <property type="protein sequence ID" value="ADO54399"/>
        <property type="gene ID" value="PPSC2_02160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.408"/>
    <dbReference type="eggNOG" id="COG1760">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022305_2_0_9"/>
    <dbReference type="OMA" id="GKIVACP"/>
    <dbReference type="OrthoDB" id="225730at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003941">
        <property type="term" value="F:L-serine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036148">
        <property type="entry name" value="MmgE/PrpD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005130">
        <property type="entry name" value="Ser_deHydtase-like_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004642">
        <property type="entry name" value="Ser_deHydtase_asu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03313">
        <property type="entry name" value="SDH_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103378">
        <property type="entry name" value="SSF103378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00718">
        <property type="entry name" value="sda_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="1" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SDH_alpha" evidence="3">
        <location>
            <begin position="17"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="264"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU366059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="31244" checksum="662E918A3C2DC892" modified="2011-01-11" version="1">MRFSHLHEISAICAEESTTIGRLMIQEQVQETNTTEEEIFRQMSDYYEVMKEAVHRGQTQDTVSRSGLTGGDGKRLAEYLRTGETCSGDASALAMAYALSVSEVNASMGRIVATPTAGSCGVIPGVFISAQERFGWDDEHMVHGLFAAGAIGYVIANNSFISGAEGGCQAEIGSAIGMAAGAMVELRGGTPEQAVHAVGLALKNTLGLICDPVAGLVEIPCIVRNGLGAVTALAAADMALAGVRSAIPSDEVIDVMLEVGSAMPSKHRETAKGGLAQTPTGKRLTESLTRNTSVKKDKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED46</accession>
    <name>E3ED46_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppD1</name>
        <name evidence="7" type="ORF">PPSC2_02175</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369043.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14940"/>
    <dbReference type="EnsemblBacteria" id="ADO54403">
        <property type="protein sequence ID" value="ADO54403"/>
        <property type="gene ID" value="PPSC2_02175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.412"/>
    <dbReference type="eggNOG" id="COG0444">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_23_9"/>
    <dbReference type="OMA" id="GSMPRID"/>
    <dbReference type="OrthoDB" id="1101128at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="9"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="38276" checksum="C29ED9861F7D7805" modified="2011-01-11" version="1">MNIKPVLEIKGLSVSFRIKDQYHPAVDHLDLTVNPNEVLAVVGESGCGKSALALSIPQLHDMERTRVEGKVLFKGTDLIRLSSGQMNKIRGAGIGMIFQDPLTALNPLMCIGKQIEENLDYHTSLSTKQKRERVLELLESVDIPNPVRVYEQYPHELSGGMRQRVMIAIAIACRPSLIIADEPTTALDVTIQSQILDLLKQLQQETGSGIILITHDLGVVAEVADRVVVMYAGEIVESADVFELFRHPQHPYTRSLLASMPGSHTKGEPLHVIGGIVPSLQDIPRNSCRFASRIPWIQQRMHEDHPRLSEISPGHWVRCTCYQHFHFEDETKGEAAHGTTRDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED87</accession>
    <name>E3ED87_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydaG</name>
        <name evidence="2" type="ORF">PPSC2_02365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369084.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15130"/>
    <dbReference type="EnsemblBacteria" id="ADO54444">
        <property type="protein sequence ID" value="ADO54444"/>
        <property type="gene ID" value="PPSC2_02365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.454"/>
    <dbReference type="eggNOG" id="COG3871">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133083_0_0_9"/>
    <dbReference type="OMA" id="GDFPHAR"/>
    <dbReference type="OrthoDB" id="1804797at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038725">
        <property type="entry name" value="YdaG_split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16242">
        <property type="entry name" value="Pyrid_ox_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyrid_ox_like" evidence="1">
        <location>
            <begin position="15"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="16301" checksum="FB40B52F60AC0962" modified="2011-01-11" version="1">MGKTDTLDRSQLEQAIVKALDNNKFCSLGTVEGGKPKVRYMALFNDGMNIHLATDRKTHKVEELKDNPNAYLLLGYEVGGTKEVLEVEATVQVTADEGLRKQVWNDSLKKWFSGPDDPDYVVLDVNPTRIEYVGQQTERQVWTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDD1</accession>
    <name>E3EDD1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-1048</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-1048</name>
        <name evidence="1" type="ORF">PPSC2_04550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369543.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54910">
        <property type="protein sequence ID" value="ADO54910"/>
        <property type="gene ID" value="PPSC2_04550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.914"/>
    <dbReference type="eggNOG" id="ENOG5030IUM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1184118_0_0_9"/>
    <dbReference type="OMA" id="RAGFMDQ"/>
    <dbReference type="OrthoDB" id="999175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="26794" checksum="89A89CE89AF6407D" modified="2011-01-11" version="1">MMLKKWPVVFMIGIIMLVSVGWNSGISYAKYYYEYSWDQYKGTEIKTYRLTPVAGRAGFMDQEKAFAVISKTPNVYGKFSGYRTEKTTEFATKSVTDEVYKYAVVDFNTDKEPETVEYINPKDGIPHTWNGTDEIRIFMRGSEAASLAELFYEGTPSEERYHFNADDVYLVAFWSSAAKPITGMSAEALVEEGPSTLINREWVAQIKDKDPAAYPQNGSLKGYFYIYKGSELKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDF1</accession>
    <name>E3EDF1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yybE</name>
        <name evidence="3" type="ORF">PPSC2_04645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369563.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17540"/>
    <dbReference type="EnsemblBacteria" id="ADO54930">
        <property type="protein sequence ID" value="ADO54930"/>
        <property type="gene ID" value="PPSC2_04645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.933"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="MESMEDH"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="34617" checksum="A7BB21B2EBF1FF28" modified="2011-01-11" version="1">MNLKHLQYFRVLAELEHFTQAAARLCITQPSLSHAISELEKDLGVHLFEKQGRNIRLNKYGRFFLKYVEHAMDELEKGEHNLRELVSPSHGNIDLAFIYTLGSHFIPAIIQAFSAQDARKDISFSFHQGNTNDIIQGLKQEHYDVAFCSHVENEPEVEFIPLAQQELVVIVSPDHPLASLDQIDLKDTADYPVIFFNKKSGIRPIIENLFAKAGVTPQIICEIEEDTAMAGLVSINYGIGVMPRISSLDYFNVKTLPIVNPEYERFIYLASIKNRYLSPAVVEFRNFALSYGKEFYLKTHQRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDG0</accession>
    <name>E3EDG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aldo/keto reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-1076</name>
        <name evidence="2" type="ORF">PPSC2_04690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369572.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17585"/>
    <dbReference type="EnsemblBacteria" id="ADO54939">
        <property type="protein sequence ID" value="ADO54939"/>
        <property type="gene ID" value="PPSC2_04690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.942"/>
    <dbReference type="eggNOG" id="COG4989">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_8_1_9"/>
    <dbReference type="OMA" id="VVYAWVM"/>
    <dbReference type="OrthoDB" id="1367386at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="15"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="36485" checksum="DB2CC7C819FDCABD" modified="2011-01-11" version="1">MKIMPLQKRGISDSRLVLGCMPFGGEWSHAPYTQEHVVEAERAVEAAQSIGITMFDHADIYRMGKAEEIFGRILKGQPGLREQIVIQSKCGIFLPDGTLPGRFDFSYDHIMESVDGILKRLGTEYLDILLLHRPDPLVEPEEVAKAFSELRTSGKVRHFGVSNMNVSQICFLERSLTEPLIVNQLEMSLAHLHFIDQTVHVNQQAGTNVHFGEGLLEYCQTEDIQLQAWGPLAQGRFSGGSLEGEPEHIRKTAELVQKLASEKGTTREAIVLGWLMKHPARIQPVIGSANPERIKACQDAERQSELMTREEWYQLYVSARGQALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDI4</accession>
    <name>E3EDI4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Multidrug export protein MepA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mdtK</name>
        <name evidence="6" type="ORF">PPSC2_04805</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MepA subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369596.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17930"/>
    <dbReference type="EnsemblBacteria" id="ADO54963">
        <property type="protein sequence ID" value="ADO54963"/>
        <property type="gene ID" value="PPSC2_04805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.966"/>
    <dbReference type="eggNOG" id="COG0534">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012893_0_1_9"/>
    <dbReference type="OMA" id="MDGIWLA"/>
    <dbReference type="OrthoDB" id="216729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13143">
        <property type="entry name" value="MATE_MepA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045070">
        <property type="entry name" value="MATE_MepA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006603">
        <property type="entry name" value="DinF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="171"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="198"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="288"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="318"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="357"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="386"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="412"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="450" mass="48857" checksum="57CC5C049EE059A3" modified="2011-01-11" version="1">MDAENLHYFEKAPIAKAVAHFAVPMMLGTSMSVIYSILNAYFLGTLHNTAMLTALALTLPLFAAIMAIGNLIGIGSGAFISRLLGEKKYDDVKNVSSFAFYSSLALGLILMAFGLPLIDSVVHGLGATPDSFGFTKDYVTIMLIGSPFVVLFFTLENIVRSEGAAITSMVGMILSVVVNIMLDALVIFVFHWGVIGVASATVISNLVASVFYAFHMGYKSQFLTISIKWFKATKDILSNVFKIGVPVFIMSLFMGAMSLVFNHFLVEYGDQAIAAYGISSRLLQFPEFILMGLCEGVVPLVAFTFTANKLRMKQTIGFTIKAILALAVVFGIIVYLISDHLIGLFTNDPQLIVMGSYILHVTFLSLFITGMTTLFTGIFQATAQGTAAFIMSVIQGITLIPVLYIANRISGFHGVVWSLVIADAVAFLVGAIMLYVLRNRLQPELDNLVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDP3</accession>
    <name>E3EDP3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yoaV1</name>
        <name evidence="4" type="ORF">PPSC2_06605</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369982.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19570"/>
    <dbReference type="EnsemblBacteria" id="ADO55351">
        <property type="protein sequence ID" value="ADO55351"/>
        <property type="gene ID" value="PPSC2_06605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1360"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033863_5_1_9"/>
    <dbReference type="OMA" id="FKGLDPM"/>
    <dbReference type="OrthoDB" id="1425840at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="89"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="118"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="145"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="212"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="248"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="270"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="7"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="148"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="33168" checksum="2C2CA7290F416486" modified="2011-01-11" version="1">MIGIAFTVMCLIFGTTFLAIKVGVEAGLPPFLSAGVRFMTAGAILFIAMRLSGKVRWSLLWRKEMLLIGTGTTFGTFSTLYWAEQYVSSGIGAILSATGPMMIVLMQSAILRQKTRRITLMGCMISFLGVVLVVLPGLAVQISGLWLAGCMAILLGELCYSGGALYSKRVMDVFRDTNPIALNAAQMFHGGWMLLVLSAFTEPWNSGGWNLLPAIGSLFYLIVFGSMIAQTLFYWLMARTNPLFPTTWLYISPPIAVGLGAFLYGEHVSWWMLAGVLLIVTGLMCMNNGIIRLVNRRKFRSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDR7</accession>
    <name>E3EDR7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjjP</name>
        <name evidence="3" type="ORF">PPSC2_06720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370006.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19685"/>
    <dbReference type="EnsemblBacteria" id="ADO55376">
        <property type="protein sequence ID" value="ADO55376"/>
        <property type="gene ID" value="PPSC2_06720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1383"/>
    <dbReference type="eggNOG" id="COG2966">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070277_0_0_9"/>
    <dbReference type="OMA" id="TLMVLFM"/>
    <dbReference type="OrthoDB" id="1425894at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010619">
        <property type="entry name" value="ThrE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06738">
        <property type="entry name" value="ThrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="197"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="230"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="ThrE" evidence="2">
        <location>
            <begin position="14"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="26841" checksum="D5BBB4C62E028395" modified="2011-01-11" version="1">MNNHSYPTPEIIEVCLLAGKLMMQNGAETYRVEDTMSRIASAYGISQSHSYVTPTGIFFAINDSEPAKLIRIVERTTDLHKVTEVNSISRKISAGTLSPSAAVKELSEIERGPLRYSNRVQLIAAALASGCFMIMFGGVWRDFPGAVLCGGIGFAALQYFHRLVKVKFFSEFSASFLIGLLAALLVIVGGGQMMDKIIIGSVMPLVPGLLITNALRDLMSGHLVSGLSKGADACLTSFAIGAGVAVIISYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB6</accession>
    <name>E3EEB6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">blt3</name>
        <name evidence="10" type="ORF">PPSC2_05170</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. TCR/Tet family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369672.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1057"/>
    <dbReference type="EnsemblBacteria" id="ADO55039">
        <property type="protein sequence ID" value="ADO55039"/>
        <property type="gene ID" value="PPSC2_05170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1047"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_11_9"/>
    <dbReference type="OMA" id="FAPFWGR"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="TCRTETA"/>
    </dbReference>
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        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
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    </dbReference>
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    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="100"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="216"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="252"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="283"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="306"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="346"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="369"/>
            <end position="386"/>
        </location>
    </feature>
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        <location>
            <begin position="11"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
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    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="399" mass="43860" checksum="871B9F9C9A20AD00" modified="2011-01-11" version="1">MSSLPKSAKFPLFILMLNLFIALLGQGMVIPILPEYLKQFNAAGAAAGYLIAAFGAAQFIFSPLGGQLSDRYGRKSMIIIGLFLTVISDLMFAVSTTLPLLYIARFIGGMGIGLMVPSNMAYVADITTPETRAKGMGYLGASMNLGMVLGPGLGGMIAEFGIRVPYFFAGGLGLVATLLSLYMPETLPKEQRKSVDQWVRREPIRKQILNSFRTSYFRYLLLILIMTLGLMNYETVYALFVERKYDFDATKISMIITVGAIIGIVVQVWLLDYLIKRLGEMKLIRLSLIMTAIALLFMLIKINLGYLLVVSALFFAFNAFLRPTVSTMIANSAGDRQGYAAGLNTTYTSLGNILGPILAGLLFDKHIQIPYIFGALILASALFLTFQKSKNEKRMVAND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEJ4</accession>
    <name>E3EEJ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Heme ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_07045</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
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        <property type="protein sequence ID" value="ADO55445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO55445">
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        <property type="gene ID" value="PPSC2_07045"/>
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    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
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        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
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        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_1"/>
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        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="8"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
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            <begin position="260"/>
            <end position="504"/>
        </location>
    </feature>
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        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="512" mass="56226" checksum="BAB544DF5EA8D548" modified="2011-01-11" version="1">MDAATPVVELKQITKRFPGIVANDSISIKLHKGEIHALLGENGAGKSTLMNILFGLYQPDEGTIEMGGNPVQIDSPNRAIDLGIGMVHQHFKLVQPFTVTENIVLGSEPRKGLKINYKKADAEVQRLSEQYGLQVNPNAKIEDISVGMQQRVEIIKTLYRGADILIFDEPTAVLTPQEISELLEIMKRLVAEGKSIILITHKLKEIMQIADTVTIIRRGKVIDTVKTSETTPNELAEKMVGRRVSFKVDKKLAQPGQTVLEMNKVISKNKDGIHVLNELNLQVKAGEILGIAGVDGNGQSELIEALTGLRKVDSGSIRLLGKELANQPPRKISEAGVSHIPEDRHKHGLVLDFSMSENMVLETYYQAPYSKNGFLNKDAIEKQAKSLIEKFDVRTPDIHTKARSLSGGNQQKAIIAREIDKNPDLLIAAQPTRGLDVGAIEFVQKQLIAQRDQGKAVLLISFELDEIMNVSDRIAVIYEGKIVGEVLPEETNDQELGLMMAGSAVKKGAENG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEL0</accession>
    <name>E3EEL0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein FrlC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">frlC3</name>
        <name evidence="2" type="ORF">PPSC2_08145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1723"/>
    <dbReference type="EnsemblBacteria" id="ADO55697">
        <property type="protein sequence ID" value="ADO55697"/>
        <property type="gene ID" value="PPSC2_08145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1713"/>
    <dbReference type="eggNOG" id="COG1082">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050006_5_1_9"/>
    <dbReference type="OMA" id="EHNAYPY"/>
    <dbReference type="OrthoDB" id="1007505at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="24"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="31912" checksum="909D4727D66D1C88" modified="2011-01-11" version="1">MIQISQIAAANYHYKRYSLEYFLDSVAKLGFHNIELWASGPHLHLDYFTYQDIKKLNKKVKERGLKTICLTPEQYVYPVSISHPDSEYRKRSVDFFCRHIEAASLLECDKVLVTTGIAYLDVDETEMWKWCRESLGEICKTAEKEGIYLPMEAFTSFTTQVFNRVEHISKMIKEVGSPYLKGLADTDVMETTGKDTIHDFIRELENNLMHVHFVDGNPGGHLVPGEGKLAMVEVLKELNSIDYKGYLGLELLDKRYVMNPEKALKDSLTWFEKHLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EES8</accession>
    <name>E3EES8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcription antiterminator BglG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arbG3</name>
        <name evidence="2" type="ORF">PPSC2_08480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370384.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1793"/>
    <dbReference type="EnsemblBacteria" id="ADO55765">
        <property type="protein sequence ID" value="ADO55765"/>
        <property type="gene ID" value="PPSC2_08480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1782"/>
    <dbReference type="eggNOG" id="COG3711">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078802_0_0_9"/>
    <dbReference type="OMA" id="HESAMSI"/>
    <dbReference type="OrthoDB" id="1193348at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.24.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004341">
        <property type="entry name" value="CAT_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036650">
        <property type="entry name" value="CAT_RNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011608">
        <property type="entry name" value="PRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036634">
        <property type="entry name" value="PRD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03123">
        <property type="entry name" value="CAT_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00874">
        <property type="entry name" value="PRD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01061">
        <property type="entry name" value="CAT_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50151">
        <property type="entry name" value="SSF50151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63520">
        <property type="entry name" value="SSF63520"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="65"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="171"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="33132" checksum="6F33C72E3F16C4A1" modified="2011-01-11" version="1">MIIRQIFNNNVIRAENQVGHEFVVIGNGLGFKKKNGQRVDEEKIEKTFVLKSDKIPQKLIDLIGETSVEYLKVADEIVGSAKKEMGDIFSDNIYISLIDHIQFAISRYRKSVGLKNSLLWQIKKFYKKEFMIGMNALDVIHAQFGIQMDEHEASFIAMHFVNARQDGQGMKQTVEITEVIDDIFNIVTDYYQITLDETSFNYSRFITHLQYFAQRLLSNEQEQLASGDNFLYDQVKEKYERAFQCTQLINQYLELKHESAMSIDEKVYLTIHIQRVTSRNDLADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEY9</accession>
    <name>E3EEY9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yfmI1</name>
        <name evidence="4" type="ORF">PPSC2_00615</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368757.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13605"/>
    <dbReference type="EnsemblBacteria" id="ADO54112">
        <property type="protein sequence ID" value="ADO54112"/>
        <property type="gene ID" value="PPSC2_00615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.121"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034180_1_0_9"/>
    <dbReference type="OMA" id="WHNRRIR"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="168"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="234"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="270"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="298"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="323"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="363"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="388"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="189"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="428" mass="47228" checksum="E6025871E7474542" modified="2011-01-11" version="1">MIRRSFYYLWGSQTISNAADIIYMLSVVVLVFSSSNSLMTTILIPLFRLSAQVISGLVAPIVLGRFRLTQVLLFSQFGQFIIFTLLLLYLWIVPEQRSFLFIFVMVFGMSFLDGWTNPARNALVPRLATGEGLMRANGMVAVSDQVVKCAGWALSGMIVAWLGSLNTLAIASCCYLVAVTVTSFIRDPLDQKESNPESPESLTDAVEPAKEKGSHWKELGEGWKIIWHNRRIRSLMIVDSVDSIGGVSWLGVFILAYVSQVLHRDASWWGFMNASFFSGTILGGLIVVGLVKRLQKNSFLYMLGALLVYVLITIVFALNTIPVAALVLFAVSGLPVQMAGIIRRTLLQTSAPPAQLPKVMAGIDVLTNLAFGLALLFMGWYADRFGMVQVYLLAAAMTTIAVLIGWWYRRAFQENEPIDQPTATSAGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF22</accession>
    <name>E3EF22_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADH-dependent flavin oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqiG</name>
        <name evidence="2" type="ORF">PPSC2_02900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369181.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15715"/>
    <dbReference type="EnsemblBacteria" id="ADO54542">
        <property type="protein sequence ID" value="ADO54542"/>
        <property type="gene ID" value="PPSC2_02900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.552"/>
    <dbReference type="eggNOG" id="COG1902">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012153_2_3_9"/>
    <dbReference type="OMA" id="YRFSQWK"/>
    <dbReference type="OrthoDB" id="1033671at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="8"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="41290" checksum="2F19E358B928EF27" modified="2011-01-11" version="1">MNPKYNPLFEAFTLPSGVTLKNRITMAPMTNFASHENGEVSDEELAYYRERSGGVGAVITACVYVTPDGKGFVNEFSADKDEMIPSLRRLADTIHQEGAKAILQIYHGGRLCPPDQIPDGQPISASAVAEEKEGAPVPREMTSDDIHRVIRAYGEATRRAIEAGYDGVELHGANGYLVQQFFSPHSNIRTDEWGGSLEERLTFPLAVVHEVKKVIAEHAKRPFIFGYRLSPEEGHTPGITLDDTMVLVDRLADEGLDYLHISVNHFFGGSFRDRSDERSRTVLIHEKVGNRVPVMGVGSLNTPDEALAALETGVPLVSLGRPLLMEPQWVQKVQNGTEDTIRTTLSKQAQQELVIPDYLWGALTTIPGWMPVTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF39</accession>
    <name>E3EF39_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mviM1</name>
        <name evidence="3" type="ORF">PPSC2_02980</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369198.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15795"/>
    <dbReference type="EnsemblBacteria" id="ADO54558">
        <property type="protein sequence ID" value="ADO54558"/>
        <property type="gene ID" value="PPSC2_02980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.567"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_17_2_9"/>
    <dbReference type="OMA" id="AEYHIRS"/>
    <dbReference type="OrthoDB" id="1339160at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="11"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="144"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="358" mass="40249" checksum="D71D33C95CE4AFA0" modified="2011-01-11" version="1">MSTSTSPTLPIRMGIIGLGLIAEYHIRSLHSMSGVSIVAVSDVNANRLQAIGEQLQLPASKRYSHYEALIRDPEVDAILSLTPNDVHFDIIRIALEEHKAVLAEKPLTLTWSEAGQLKKLYTANPVPLLVHYKHRYGAAFQYTKQLLDEHKLGKIYNIQFRYLMDAFSPYRQHPYTWRHNLAKAGSGVVGDTASHIIDLARFLIGEFKSVAALLHIITPERPDPVTGLPVKVDVEDLAAFHGIIGDNTVGTFITHKNAIGKRHDIEVDIYGELGTLHASLNNRESIRIVLRDLEHPDAEYETWAVPAIYNHTADGDFVKLARGEFVDRAPLFDDGYNNQWVLEKILQSWRENGRLVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF44</accession>
    <name>E3EF44_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-716</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-716</name>
        <name evidence="2" type="ORF">PPSC2_03005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369203.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15820"/>
    <dbReference type="EnsemblBacteria" id="ADO54564">
        <property type="protein sequence ID" value="ADO54564"/>
        <property type="gene ID" value="PPSC2_03005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.572"/>
    <dbReference type="eggNOG" id="ENOG5032ZJG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_125898_0_0_9"/>
    <dbReference type="OMA" id="SWICMIV"/>
    <dbReference type="OrthoDB" id="2062896at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025058">
        <property type="entry name" value="DUF3995"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13160">
        <property type="entry name" value="DUF3995"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="15825" checksum="E0D378186DC0344A" modified="2011-01-11" version="1">MLELLTWAVGGILFVLSGMHLYWVFGGQKGAKAAIPSTGTDLLFKPSKIGTSIVAILLALAAWFVLELGRVVPIQFFHFFYFYGAGLLSCLFILRSIGDFKWVGFFKRKKGTVFAKWDTVLYSPLCFLLGTAILMMMLLRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFM1</accession>
    <name>E3EFM1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exopolysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370139.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20325"/>
    <dbReference type="EnsemblBacteria" id="ADO55512">
        <property type="protein sequence ID" value="ADO55512"/>
        <property type="gene ID" value="PPSC2_07345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1518"/>
    <dbReference type="eggNOG" id="COG4632">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_780412_0_0_9"/>
    <dbReference type="OMA" id="GYAMKVK"/>
    <dbReference type="OrthoDB" id="1587976at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018711">
        <property type="entry name" value="NAGPA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09992">
        <property type="entry name" value="NAGPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAGPA" evidence="1">
        <location>
            <begin position="174"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="355" mass="38659" checksum="9CE721633280FBBA" modified="2011-01-11" version="1">MNVDTKLVNRFFMLALAPFIGLLGCILLVHPPLSFPKSTSPSLQKAEITLQAQSVGKQLDEAKQTATYTLSTIRRTSELYKQTTQTMNQLVVTASAQSKRPAVIYNRRITAKLGVPYYKVDSNRITIELFKVNPGIYHGYAMKVKLKDPTAMKMSLGNDKLGGSETTMRAVLRHGAIAGINAGGFADGDGKRYPLSTTVLNGRYLTGFQSSFKDLSFVGLSNDGKLIGGKFYNQGALDSLKPAFGATFVPVLLQRGQKVPIPDKWKVSPKRAPRTVIGNYKDDQLLIIVVDGYNESGGSGATLEELQGKMFNLGVQDAYNLDGGGSSSLILNGRIVNKPSDGNLRPVPTHFLFYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT6</accession>
    <name>E3EFT6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SMI1_KNR4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370427.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1836"/>
    <dbReference type="EnsemblBacteria" id="ADO55808">
        <property type="protein sequence ID" value="ADO55808"/>
        <property type="gene ID" value="PPSC2_08670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1826"/>
    <dbReference type="eggNOG" id="ENOG5033E0S">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1325281_0_0_9"/>
    <dbReference type="OMA" id="DKKADIR"/>
    <dbReference type="OrthoDB" id="1050889at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018958">
        <property type="entry name" value="Knr4/Smi1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09346">
        <property type="entry name" value="SMI1_KNR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMI1_KNR4" evidence="1">
        <location>
            <begin position="54"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="24406" checksum="26EC1CE6FE325DC9" modified="2011-01-11" version="1">MDKKADIRTSMKELFAQMNEAFFMDVEENVPFEMRDGNVDEEGWIKWKPIPSQITEQEVRDMEEKYHFELPPLLRNFIMSYHYVSLQFDNESIPGVYWSDCTFVEFPRLPIGHGLKAFYDLIDQWSPLLSAGYIPFAIAEDNQGPVCLNAGSRHKDGDYPIVWFFHEDLRHLDEDELRIRSNLLPHVQGLFPSSVELFNVMFKQIRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG22</accession>
    <name>E3EG22_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-dependent protease subunit HslV</fullName>
            <ecNumber evidence="5">3.4.25.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hslV</name>
        <name evidence="6" type="synonym">clpQ</name>
        <name evidence="6" type="ORF">PPSC2_09830</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP-dependent cleavage of peptide bonds with broad specificity.</text>
            <dbReference type="EC" id="3.4.25.2"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="5">Allosterically activated by HslU binding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the peptidase T1B family. HslV subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.2" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370669.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22300"/>
    <dbReference type="MEROPS" id="T01.007"/>
    <dbReference type="EnsemblBacteria" id="ADO56055">
        <property type="protein sequence ID" value="ADO56055"/>
        <property type="gene ID" value="PPSC2_09830"/>
    </dbReference>
    <dbReference type="GeneID" id="66577949"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2072"/>
    <dbReference type="eggNOG" id="COG5405">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_093872_1_0_9"/>
    <dbReference type="OMA" id="IMKGNAR"/>
    <dbReference type="OrthoDB" id="1129370at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009376">
        <property type="term" value="C:HslUV protease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005839">
        <property type="term" value="C:proteasome core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004298">
        <property type="term" value="F:threonine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01913">
        <property type="entry name" value="protease_HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00248">
        <property type="entry name" value="HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022281">
        <property type="entry name" value="ATP-dep_Prtase_HsIV_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="PTHR32194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039093">
        <property type="entry name" value="HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03692">
        <property type="entry name" value="ATP_dep_HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5 6" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0915">Sodium</keyword>
    <keyword evidence="5" id="KW-0888">Threonine protease</keyword>
    <feature type="active site" evidence="5">
        <location>
            <position position="8"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="171"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="19466" checksum="43D2979AD97D85FF" modified="2011-01-11" version="1">MDMSFHATTICAVRHNGKGAIAGDGQVTFGNSVVMKQTAKKVRRLYRGQVVAGFAGSVADAITLFEKFENKLEEHHGNLQRAAVELAKDWRQDRVLRKLEALMIVMDSSGMLLISGGGEIIEPDDDVLAIGSGGNFALAAARAFKRHGSGMEAKDMAREALEVASEICVYTNSQIIVEEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG35</accession>
    <name>E3EG35_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellar biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">flg</name>
        <name evidence="1" type="ORF">PPSC2_09895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370681.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22365"/>
    <dbReference type="EnsemblBacteria" id="ADO56068">
        <property type="protein sequence ID" value="ADO56068"/>
        <property type="gene ID" value="PPSC2_09895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2085"/>
    <dbReference type="eggNOG" id="ENOG5032Y5R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_145226_0_0_9"/>
    <dbReference type="OMA" id="NIDSAVF"/>
    <dbReference type="OrthoDB" id="1943154at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013367">
        <property type="entry name" value="Flagellar_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12611">
        <property type="entry name" value="Flagellar_put"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02530">
        <property type="entry name" value="flg_new"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="13819" checksum="4E3021A2FC36F879" modified="2011-01-11" version="1">MNDRITVGRLFPTNVPPAAISQNRLNSVTKDTKPFGQVLQEQVLKLSNHAAKRLEQRGIELRSDQMAKINSAVDKAAAKGAKESLILMQDMALIVSVPNRTVVTAMDKQSMEDNVFTQIDSAVIIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB8</accession>
    <name>E3EGB8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">HPr kinase/phosphorylase</fullName>
            <shortName evidence="11">HPrK/P</shortName>
            <ecNumber evidence="11">2.7.11.-</ecNumber>
            <ecNumber evidence="11">2.7.4.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">HPr(Ser) kinase/phosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">hprK</name>
        <name evidence="14" type="synonym">hprK1</name>
        <name evidence="14" type="ORF">PPSC2_00820</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK/P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport: it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>[HPr protein]-L-serine + ATP = [HPr protein]-O-phospho-L-serine + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46600"/>
            <dbReference type="Rhea" id="RHEA-COMP:11602"/>
            <dbReference type="Rhea" id="RHEA-COMP:11603"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 11">
            <text>[HPr protein]-O-phospho-L-serine + H(+) + phosphate = [HPr protein]-L-serine + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:46604"/>
            <dbReference type="Rhea" id="RHEA-COMP:11602"/>
            <dbReference type="Rhea" id="RHEA-COMP:11603"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homohexamer.</text>
    </comment>
    <comment type="domain">
        <text evidence="11">The Walker A ATP-binding motif also binds Pi and PPi.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="11">Both phosphorylation and phosphorolysis are carried out by the same active site and suggest a common mechanism for both reactions.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the HPrK/P family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.-" evidence="11"/>
    <dbReference type="EC" id="2.7.4.-" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013308232.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EGB8"/>
    <dbReference type="STRING" id="1406.LK13_13810"/>
    <dbReference type="EnsemblBacteria" id="ADO54146">
        <property type="protein sequence ID" value="ADO54146"/>
        <property type="gene ID" value="PPSC2_00820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.152"/>
    <dbReference type="eggNOG" id="COG1493">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052030_0_1_9"/>
    <dbReference type="OMA" id="AMNNRQK"/>
    <dbReference type="OrthoDB" id="391150at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004712">
        <property type="term" value="F:protein serine/threonine/tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006109">
        <property type="term" value="P:regulation of carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01918">
        <property type="entry name" value="HprK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1390.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01249">
        <property type="entry name" value="HPr_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003755">
        <property type="entry name" value="HPr(Ser)_kin/Pase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011104">
        <property type="entry name" value="Hpr_kin/Pase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011126">
        <property type="entry name" value="Hpr_kin/Pase_Hpr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028979">
        <property type="entry name" value="Ser_kin/Pase_Hpr-like_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30305:SF1">
        <property type="entry name" value="PTHR30305:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07475">
        <property type="entry name" value="Hpr_kinase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02603">
        <property type="entry name" value="Hpr_kinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75138">
        <property type="entry name" value="SSF75138"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00679">
        <property type="entry name" value="hpr-ser"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 11" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="7 11 14" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 11" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Hpr_kinase_N" evidence="12">
        <location>
            <begin position="5"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="Hpr_kinase_C" evidence="13">
        <location>
            <begin position="131"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="region of interest" description="Important for the catalytic mechanism of both phosphorylation and dephosphorylation" evidence="11">
        <location>
            <begin position="202"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Important for the catalytic mechanism of dephosphorylation" evidence="11">
        <location>
            <begin position="265"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for phosphorylation activity. Proton donor; for dephosphorylation activity" evidence="11">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="154"/>
            <end position="161"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="161"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="203"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF07475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO54146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="34848" checksum="43FDE428B91D4CB3" modified="2011-01-11" version="1">MAKQVKVSELVQQFQMEVISGEKGLRRLITVDDLNRPGLEMAGYFEYHTQERVQLLGRSELAFLGMLPPEERRDRMERLCTELTPCIIITRGLEVPAELVEASAERDIPVLRTNMATTILSSRITGFLERKLAPTATIHGVLCDVYGVGMLITGSSGIGKSETALELVKRGHRLVADDAVEIRQTSDFQLHGTAPELIRHLLEIRGVGIINVMTLFGAGAVRNNKRITLVVRLEAWQQDKQYDRLGLDEETTRIIDTDVPLVTIPVRPGRNLAVIIEVAAMNYRLKQMGVNAALQFTNKLTATISEDMEEMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGC0</accession>
    <name>E3EGC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pyrophosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hprP</name>
        <name evidence="1" type="ORF">PPSC2_00830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368792.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13820"/>
    <dbReference type="EnsemblBacteria" id="ADO54148">
        <property type="protein sequence ID" value="ADO54148"/>
        <property type="gene ID" value="PPSC2_00830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.154"/>
    <dbReference type="eggNOG" id="COG0546">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_19_3_9"/>
    <dbReference type="OMA" id="LLIFDWD"/>
    <dbReference type="OrthoDB" id="1484726at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="217" mass="24131" checksum="EE706737182F9DDE" modified="2011-01-11" version="1">MINTILFDLDGTIMDTNELIISTFLHILNHPDADPLTREHIIPHMGGTLDDQLRTFTGLTDVSGLIKDYRAYNQIHHDQMVKPFPHVIEVIQELRARGIKLGVVTTKIRPSTMRVLNLFDLTSSMDYIVTVDDVEHPKPHAEPVLKALAGLNAEAEHTLMVGDSSFDILSAQAAGVKSAGVAWSLKGEETLRGYGPDYMLYDMRDLLKLELQGVNVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH39</accession>
    <name>E3EH39_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370226.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55599">
        <property type="protein sequence ID" value="ADO55599"/>
        <property type="gene ID" value="PPSC2_07735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1604"/>
    <dbReference type="HOGENOM" id="CLU_185255_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="10950" checksum="44594BDC26D11D5A" modified="2011-01-11" version="1">MNNNLHKSLYEKFIKEHNGAAMLVVYMFQVVSRYEEKRFDPLVDVIDKNKPVNSPELNLLDSSIAESFKLAVKHALVDLEIEKKQKEIEELQSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC3</accession>
    <name>E3EHC3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YqhG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqhG</name>
        <name evidence="2" type="ORF">PPSC2_09165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370531.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21635"/>
    <dbReference type="EnsemblBacteria" id="ADO55914">
        <property type="protein sequence ID" value="ADO55914"/>
        <property type="gene ID" value="PPSC2_09165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1932"/>
    <dbReference type="eggNOG" id="ENOG502Z821">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052642_0_0_9"/>
    <dbReference type="OMA" id="IMNRPFY"/>
    <dbReference type="OrthoDB" id="1610424at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024562">
        <property type="entry name" value="YqhG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11079">
        <property type="entry name" value="YqhG"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="253"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="316" mass="36420" checksum="CCFEA308396D5CC5" modified="2011-01-11" version="1">MTMNAQQVQRFVHTYLEATGCSIIERSPHHVTVKLSPEADKALTNRPYYWGYVERTGVPAQTMSFTFIFDGEAYRTEQERLADQTPPAPVAGNAAQDQVMGRYFGHVPTLPQLGPGRIMQEELRYGSRRLHQIFEAARDGGKYVYLFEQPDARQLSARSPVVYEAWLSVCYKIEFACDLKREELQWLGISLKSGTIVTNFGAMLETRQLSPLLAGNMHVQPALLSVPEASTSLENYLTEQLRQQDYGWAEQAKERLREELEVIDHYYDDLIKEQKEEEDKKESVLEQHQARRKEMVWQYEPKVLVSAINCGIFHLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHD1</accession>
    <name>E3EHD1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dhaR1</name>
        <name evidence="3" type="ORF">PPSC2_09205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1950"/>
    <dbReference type="EnsemblBacteria" id="ADO55922">
        <property type="protein sequence ID" value="ADO55922"/>
        <property type="gene ID" value="PPSC2_09205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1940"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_28_0_9"/>
    <dbReference type="OMA" id="QALHLFW"/>
    <dbReference type="OrthoDB" id="1204683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="13"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="20140" checksum="3DB0439B6C48046D" modified="2011-01-11" version="1">MQVFWEKGFEATSLSDLTSRMGIQRPSIYAAYGDKKQLFEAALRKYTQSHAACVRAKLQNSSAVKEAFYNFFGGVVAEEYEEGSNKGCFCINTMVELAPHDERFEILTREHQMYLSAVFQETLERGIQSGELEVTIDERALAHTLVSLLIGITVMMKSRPERSFVDHAVATALMLLDGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHW8</accession>
    <name>E3EHW8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">estA3</name>
        <name evidence="2" type="ORF">PPSC2_11695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24080"/>
    <dbReference type="EnsemblBacteria" id="ADO56460">
        <property type="protein sequence ID" value="ADO56460"/>
        <property type="gene ID" value="PPSC2_11695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2474"/>
    <dbReference type="eggNOG" id="COG2021">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_0_0_9"/>
    <dbReference type="OMA" id="AHIQGSQ"/>
    <dbReference type="OrthoDB" id="1196738at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="31"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="31584" checksum="9A9B8D8BC9F31930" modified="2011-01-11" version="1">MNELLIKSDGIEICSESFGERVHPAILLIMGAQSSLIWWEEEFCQRLADTGRFVVRYDNRDVGCSTTYEPGQPYYTFEDMADDAIRVLDAYKIEQAHIVGMSMGGMLTQMIALRHPDRVLTVTLLATSNFAPDLPPMEKKVMDYFSNMEAIDWTNEQSVVDFVVGRSRILVGSKHSFDENKVYQLAKEEWKRSNNMASMNNHAMLSGGESYLARTGEINVPTLVIHGTEDPIIPYEHGIHLANEIPGAFLLALEGAGHEIHYDDWDLIIDSISKHTLMPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EII2</accession>
    <name>E3EII2_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370247.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55620">
        <property type="protein sequence ID" value="ADO55620"/>
        <property type="gene ID" value="PPSC2_07810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1625"/>
    <dbReference type="eggNOG" id="ENOG5032SEU">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_181369_1_0_9"/>
    <dbReference type="OMA" id="NCACTRI"/>
    <dbReference type="OrthoDB" id="1964538at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="9777" checksum="CD27A8318B5CB1C1" modified="2011-01-11" version="1">MGAFVLLFKEHEDETVVIYRYGPNEHIMGKIQLNKETKLFSEIEPLSDPSYSNKFYFDRAAQRMARCFVKEDGIFPDEMTFES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIK3</accession>
    <name>E3EIK3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370268.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55641">
        <property type="protein sequence ID" value="ADO55641"/>
        <property type="gene ID" value="PPSC2_07885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1649"/>
    <dbReference type="HOGENOM" id="CLU_2956303_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169266" evidence="1">
        <location>
            <begin position="25"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6455" checksum="B67B8A5DB5934688" modified="2011-01-11" version="1">MKAILKFLTLTVTFAVVIGNNVFASDDTSEEMKGVTKAIVPDSVLEELNHPDKIYTKDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIK4</accession>
    <name>E3EIK4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA recombinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pinR3</name>
        <name evidence="7" type="ORF">PPSC2_07890</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370269.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55642">
        <property type="protein sequence ID" value="ADO55642"/>
        <property type="gene ID" value="PPSC2_07890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1650"/>
    <dbReference type="eggNOG" id="COG1961">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010686_5_1_9"/>
    <dbReference type="OMA" id="PELPTSW"/>
    <dbReference type="OrthoDB" id="1791095at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006118">
        <property type="entry name" value="Recombinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00397">
        <property type="entry name" value="RECOMBINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="6">
        <location>
            <begin position="5"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-serine intermediate" evidence="4 5">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR606118-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="205" mass="24001" checksum="1277DE576710C44A" modified="2011-01-11" version="1">MSEIRRYAYIRVSSKDQNEARQLESMKDLGIMERDYFIDKQSGKNFDKPQYQTLKSVLRHGDILFIKELDRLGRNAKEIKREWQDITCEIGAHIVILDMPILDTRQYQNGLEKVISSIVLELLSYMAEREREKINGRQSEDIAAAKNNGVVFGRPKKAISDEFITAYEEWKQGGITAVEAMKRVEMKPNTFYRRVKEYEQQKQVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIP2</accession>
    <name>E3EIP2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370303.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1705"/>
    <dbReference type="EnsemblBacteria" id="ADO55680">
        <property type="protein sequence ID" value="ADO55680"/>
        <property type="gene ID" value="PPSC2_08055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1695"/>
    <dbReference type="HOGENOM" id="CLU_1141710_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="28069" checksum="C3C110490B8B2412" modified="2011-01-11" version="1">MGKIQYSPQVEPKETREQDESDASKKVLEGAYSKNMLVYAGNNTFPFENPMVELEKTWVRGVEKVKDSTDTVIHYPDRKAFALVAVPIARKKYGDITANLLQHSLDYKPGNLHFNEWSYEAQQIKKSKEHIAIVNEEVKKANANKVKSFSYNGSEQLESDRDLYNAFHKMKYKIDGTYVNGQWKITTTYSDVYNFEYNFKQMFTGNNKLGWAAANLTNLMESWGTLNEYTSYVTVTDTKKAWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIP4</accession>
    <name>E3EIP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Manganese catalase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydbD</name>
        <name evidence="2" type="ORF">PPSC2_08075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the manganese catalase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370305.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20705"/>
    <dbReference type="EnsemblBacteria" id="ADO55682">
        <property type="protein sequence ID" value="ADO55682"/>
        <property type="gene ID" value="PPSC2_08075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1699"/>
    <dbReference type="eggNOG" id="COG3546">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057467_1_1_9"/>
    <dbReference type="OMA" id="NPHHAIV"/>
    <dbReference type="OrthoDB" id="1420351at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd01051">
        <property type="entry name" value="Mn_catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007760">
        <property type="entry name" value="Mn_catalase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039377">
        <property type="entry name" value="Mn_catalase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05067">
        <property type="entry name" value="Mn_catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="31112" checksum="2F81D40FFE0BF97E" modified="2011-01-11" version="1">MFRHQKELQFEVKVERPDPLFARQVQEVLGGQFGEMTVMMQYLFQGFNCRGDEKYKDMLMDIGTEEIGHVEMLCALISQLLDGAKPEDQEQAAKDPVTAAIMGGINPQHLLVSGLGGLPTNSNGVPWNGSYIVASGNLLADMRSNLHAESQGRLQVARLYHMTQDESVRATLRKMLARDRYHQYQWLAAIQELEEKNGVVVPASFPPEAEQESQPEAYEFWNLSEGEESSEGLWATGSAPDGTGSYVYISNPVAKGQIYNAKIPATELHHDLDHKTSDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIP8</accession>
    <name>E3EIP8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cnpD3</name>
        <name evidence="2" type="ORF">PPSC2_08095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370309.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20725"/>
    <dbReference type="EnsemblBacteria" id="ADO55686">
        <property type="protein sequence ID" value="ADO55686"/>
        <property type="gene ID" value="PPSC2_08095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1703"/>
    <dbReference type="eggNOG" id="COG2206">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_92_1_9"/>
    <dbReference type="OMA" id="CAYQHHE"/>
    <dbReference type="OrthoDB" id="1094814at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037522">
        <property type="entry name" value="HD_GYP_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51832">
        <property type="entry name" value="HD_GYP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HD-GYP" evidence="1">
        <location>
            <begin position="128"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="43413" checksum="9B0D77F08C76B3C5" modified="2011-01-11" version="1">MQLGGFRYQNNRERIKLRLVPVTLLRAGMKLGKKIYNENGMVLLSEGVELTSRLIERLGQVGIGYVYIEDAVTEDIVIPEMIHEQTRVAALQEIKKQFQGLSSYSVDHKHKYFGKSFYKVMESILDDIGGRQDAIIMLMDIGAADQDLYHHSLNVCLYSLVLGIFNGYDNNQLMELGIGSLLHDIGKMKISPQVLYKPGKLTDEEYEHMKTHTVIGYKLLKDEPGIPLLSAHCALQHHERIDGSGYPHGWKKDQIHEYAKWIGLADSYDAMTASRIYKQALLPYEAMEVLYAGAGTLYEQRMLEAFRDCVAIYPLGLSVMLNTGEEGVVVRIHPKIPQRPVIRIVRDRDGQELKAPYDVDLSVSLSVMITNTLGAATGPFGGVRVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIW3</accession>
    <name>E3EIW3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribose-5-phosphate isomerase A</fullName>
            <ecNumber evidence="2">5.3.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Phosphoriboisomerase A</fullName>
            <shortName evidence="2">PRI</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">rpiA</name>
        <name evidence="3" type="ORF">PPSC2_09485</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>aldehydo-D-ribose 5-phosphate = D-ribulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:14657"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="ChEBI" id="CHEBI:58273"/>
            <dbReference type="EC" id="5.3.1.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ribose 5-phosphate isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.6" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370599.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21955"/>
    <dbReference type="EnsemblBacteria" id="ADO55982">
        <property type="protein sequence ID" value="ADO55982"/>
        <property type="gene ID" value="PPSC2_09485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2000"/>
    <dbReference type="eggNOG" id="COG0120">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056590_1_0_9"/>
    <dbReference type="OMA" id="YDWDEVN"/>
    <dbReference type="OrthoDB" id="1681738at2"/>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00412"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004751">
        <property type="term" value="F:ribose-5-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009052">
        <property type="term" value="P:pentose-phosphate shunt, non-oxidative branch"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01398">
        <property type="entry name" value="RPI_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00170">
        <property type="entry name" value="Rib_5P_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020672">
        <property type="entry name" value="Ribose5P_isomerase_typA_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004788">
        <property type="entry name" value="Ribose5P_isomerase_type_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06026">
        <property type="entry name" value="Rib_5-P_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00021">
        <property type="entry name" value="rpiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="25"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="80"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="93"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="24196" checksum="60C4807F2B81AD19" modified="2011-01-11" version="1">MNLKQKAAEKAVEAIQDGMKVGLGTGSTAYWAIQKIGERVAQGLHIQAVATSQASEDQARGLGIPIIPFDQIGRLDVTIDGADEVNEQLVLVKGGGGALLREKIVESNSDRLIIIVDESKDVKVLGAFPLPVEVVPFASEWTLEALRQTGCKAEWRMKDGERFLTDNGNYIADCRYGTIENPQELEIRLNQIPGVVDNGLFINMADQVIIARANGQIDVRNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ23</accession>
    <name>E3EJ23_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cu_amine_oxidN1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_10515</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370810.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2232"/>
    <dbReference type="EnsemblBacteria" id="ADO56204">
        <property type="protein sequence ID" value="ADO56204"/>
        <property type="gene ID" value="PPSC2_10515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2221"/>
    <dbReference type="eggNOG" id="COG1649">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_930140_0_0_9"/>
    <dbReference type="OMA" id="ENFGYKA"/>
    <dbReference type="OrthoDB" id="1690534at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168999" description="Cu_amine_oxidN1 domain-containing protein" evidence="1">
        <location>
            <begin position="22"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="48"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="33576" checksum="341FB88DB26C7D34" modified="2011-01-11" version="1">MKKVIMFVFFFVLTFQTWAIADAANPKSVNAVNVNGKFIATDVSPIIKDGRVLVPIRTLASLGVTYQWDSKSQSALITKGKDQIKLTANKKEAFKNNQAVQVDVPVQMTQGRILVPIRFVSENFGYKANYEKIRSILFIQDGNYKVDQESLQAEDLQAARQAAISLPVQFSFNSLSSLEKPGANKEYTYVFPRGDSSRYMYFNNDWSAGNTIVEIKDGVAKAVWQFTSGNGLDDIVSSAGQRPSYNYVEWVTDILMFNDENGNIKAVYKDDKGQQKELNAKAKSYIDVIQSIPNETRKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ47</accession>
    <name>E3EJ47_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ferredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56228.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599689.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23010"/>
    <dbReference type="EnsemblBacteria" id="ADO56228">
        <property type="protein sequence ID" value="ADO56228"/>
        <property type="gene ID" value="PPSC2_10615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2243"/>
    <dbReference type="eggNOG" id="COG3411">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_126515_3_1_9"/>
    <dbReference type="OrthoDB" id="1412344at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56228.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="12315" checksum="4182E9AF87313242" modified="2015-05-27" version="2">MAIFDLEPMKYHVLICNGGTCMRHEGEEVTQEIRDEIRKQHAEAYIHTTRTRCNGRCHDAAVVIVYPQGDWYGQMTPASGTELVQKLVAGEKLEPHLFHECTRKSSSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJG0</accession>
    <name>E3EJG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371115.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24245"/>
    <dbReference type="EnsemblBacteria" id="ADO56510">
        <property type="protein sequence ID" value="ADO56510"/>
        <property type="gene ID" value="PPSC2_11925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2526"/>
    <dbReference type="eggNOG" id="ENOG502Z8H1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_098225_0_0_9"/>
    <dbReference type="OMA" id="EEYRWPG"/>
    <dbReference type="OrthoDB" id="1278803at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025671">
        <property type="entry name" value="HXXEE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13787">
        <property type="entry name" value="HXXEE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="24010" checksum="1C4E9EE02FB3104A" modified="2011-01-11" version="1">MEFLRKYWQDAGAIIGVAVCIVLFLNPAMFSDISGILWLSFVNILFHQFEEYRWPGYFAGLFNNILFKSEAPDHYPLNPNSAMIINVAIAYVFYLLPVWFPHVIWLGLAPVLMGFFQVVWHGIVVNLKAKTVYNPGLCTALLLHVPIGIWYIHEIVKRDIPTAIDWIAGTIYFVFAVYIFIIKGNIWLKKSDSPYAFSKQQLGIYDRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJG8</accession>
    <name>E3EJG8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yndE11</name>
        <name evidence="7" type="ORF">PPSC2_11960</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371122.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24280"/>
    <dbReference type="EnsemblBacteria" id="ADO56518">
        <property type="protein sequence ID" value="ADO56518"/>
        <property type="gene ID" value="PPSC2_11960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2533"/>
    <dbReference type="eggNOG" id="COG3949">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_1_1_9"/>
    <dbReference type="OMA" id="AHINEGL"/>
    <dbReference type="OrthoDB" id="842200at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="137"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="181"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="218"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="269"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="337"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="41783" checksum="623E252BE1A13C42" modified="2011-01-11" version="1">MRQNTIRVSELIICMSLFEVGSTTLFLMGAEAKQDAWLVMLIGALAGLLLLMLHLAIHHQDPELDLFMLFRRYTGKYVGTLINLLFVMYFTYEASRNIRDLGEVTVMTLLRQTPLWIIILITIVVVSNTVRYGYKALFLLCLFLFPFFVLGYALISILIPATGLFHLENSLPVLEEGWTPIFKAAIPELISFPFGQTVLFLVFYPLAYKGRNLTKPVFFAYIMTALALTFVNQLEIFVLGPKIAANSTLPLLEAVQLIELADLFERMDALFTLLLFLGLIIKMSLFFNGAVIGLEKITGVGFKKWILPLAALIYGLSFLSPNYIHHMVIGRKFVLNSWFPVFQIFLPLLLFAFIVIKKRKKTNKQSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJR8</accession>
    <name>E3EJR8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26785</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386080.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59666">
        <property type="protein sequence ID" value="ADO59666"/>
        <property type="gene ID" value="PPSC2_26785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5662"/>
    <dbReference type="HOGENOM" id="CLU_1319884_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="24940" checksum="C4149A12E938E910" modified="2011-01-11" version="1">MSEFALLTIQKKLDHEKHPLYWNLYMAKKSKQSIDKVLQNEGIDSNLFGKIRFIENHQGIFVEHVSHDPEKAREQQLKCEMDVPSEWLMCFSYQDMKVIGLDMGVFEAEANMSDVFERLHWSEIENSNFDLFVKRDLLIKWLRKHSTRNDRIHLSSDWLFYHPEGKYDYEFVQRFINRRISELRKTVTCNHWSKDPLARLQPIQMTAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJV3</accession>
    <name>E3EJV3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386115.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59701">
        <property type="protein sequence ID" value="ADO59701"/>
        <property type="gene ID" value="PPSC2_26630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5624"/>
    <dbReference type="HOGENOM" id="CLU_2602759_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="9092" checksum="B08541A462E2B416" modified="2011-01-11" version="1">MIQELTIDFESGKVLRGETELMTTEELLFLIGSAVQYNNMFPIEQSQKFVADLHELAGTGFTTEQFAEMKKAMKEWQEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK57</accession>
    <name>E3EK57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0376"/>
    <dbReference type="EnsemblBacteria" id="ADO59766">
        <property type="protein sequence ID" value="ADO59766"/>
        <property type="gene ID" value="PPSC2_26340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5551"/>
    <dbReference type="HOGENOM" id="CLU_2956317_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="7313" checksum="0F0F94511B20C258" modified="2011-01-11" version="1">MNEFEVVKFSEYVEFITENYDQKHRRLIIILNRTKKKRIKKKLMSQLFKLSYDSTIEIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK87</accession>
    <name>E3EK87_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385828.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0019"/>
    <dbReference type="EnsemblBacteria" id="ADO59414">
        <property type="protein sequence ID" value="ADO59414"/>
        <property type="gene ID" value="PPSC2_27985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5932"/>
    <dbReference type="HOGENOM" id="CLU_2288775_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11789" checksum="372E36B7928DD415" modified="2011-01-11" version="1">MLRNIFGKLLGKKEEAVKIDMGSVIDALSRRRWDCEVVQPNVVVVKEKYRNHQRDFSRLFLNFMGDEVQFKDERGQQITKIPSSVKVESMYSVLKNITNVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKL9</accession>
    <name>E3EKL9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phage_ABA_S domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386265.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0462"/>
    <dbReference type="EnsemblBacteria" id="ADO59851">
        <property type="protein sequence ID" value="ADO59851"/>
        <property type="gene ID" value="PPSC2_25935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5450"/>
    <dbReference type="HOGENOM" id="CLU_1935977_0_0_9"/>
    <dbReference type="OrthoDB" id="2224096at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028985">
        <property type="entry name" value="Bacillus_phage_prot-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041270">
        <property type="entry name" value="Phage_ABA_S"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18066">
        <property type="entry name" value="Phage_ABA_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phage_ABA_S" evidence="1">
        <location>
            <begin position="23"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="14595" checksum="F1C5EF38780C28DE" modified="2011-01-11" version="1">MLMTKDEVICKWNRMSALERNVWVATAVMGYKADPFRPGMILDSKGCSTAVSNYSEDFAAAGEVFEKIKNYGAWIEVAWNPRKQHYRGFIGAKNVIELKSSCDIPGRTAPEAICLSALISILTEEQEREE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKS6</accession>
    <name>E3EKS6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27460</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385941.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0133"/>
    <dbReference type="EnsemblBacteria" id="ADO59527">
        <property type="protein sequence ID" value="ADO59527"/>
        <property type="gene ID" value="PPSC2_27460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5812"/>
    <dbReference type="HOGENOM" id="CLU_965925_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="32452" checksum="F466F21CEAE43281" modified="2011-01-11" version="1">MKPKILIGLMGVGIVVGLSISLYLSFSEKQDPTQSAQETQQPKTTTAAVNPDLKDSHSDVQKKPLKGSDKSIYEKPPEQKRRSIQSLEAEPLEQEARQDFRNLKFMNGVEKLQSIVNEVEDKDEGAMLHQLYFEGSMLANLIPPSEEDEISGDHGETIEFDGMVGILSMIKDPENALLGTLALNDRYRAEIILEQDSLNPIFDGGVRILQLSKETEGKIFEDVFNMYKSAKTLYKIDFEIEGHHLVGYVIQFADGTSKLYSILPADGAKPPYKSIREWQKIYKIIENR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKX8</accession>
    <name>E3EKX8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386297.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0494"/>
    <dbReference type="EnsemblBacteria" id="ADO59883">
        <property type="protein sequence ID" value="ADO59883"/>
        <property type="gene ID" value="PPSC2_25550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5416"/>
    <dbReference type="HOGENOM" id="CLU_2570617_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="81" mass="9080" checksum="F540A801D1F514CC" modified="2011-01-11" version="1">MKRLALTSENLISAAKEAQTTGLTIYIVQSKDGNTIELRDYIPIVDAEKVQTDPDVVTLIPYKSVLEHTRTLVPVYVSEYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL53</accession>
    <name>E3EL53_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Deoxycytidine triphosphate deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27070</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386029.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0222"/>
    <dbReference type="EnsemblBacteria" id="ADO59615">
        <property type="protein sequence ID" value="ADO59615"/>
        <property type="gene ID" value="PPSC2_27070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5724"/>
    <dbReference type="eggNOG" id="COG0717">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087476_0_1_9"/>
    <dbReference type="OMA" id="PPIERIN"/>
    <dbReference type="OrthoDB" id="1598407at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008829">
        <property type="term" value="F:dCTP deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006229">
        <property type="term" value="P:dUTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07557">
        <property type="entry name" value="trimeric_dUTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011962">
        <property type="entry name" value="dCTP_deaminase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036157">
        <property type="entry name" value="dUTPase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033704">
        <property type="entry name" value="dUTPase_trimeric"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51283">
        <property type="entry name" value="SSF51283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02274">
        <property type="entry name" value="dCTP_deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="19919" checksum="ADD13D971E42A5A0" modified="2011-01-11" version="1">MILSGLEIKKRLGKDILISDFSEKRLNPNSYNVRLHTQLVVYDDKILDMKRNHHIRTMTIPEEGLVLEPGILYLGRTVEHTSTENLVPMLEGRSSIGRLGCYIHVTAGFGDVGFNGFWTLEISVIQPLRIYPNVEIGQIFYHTIEGEFEKYKEGKYQNNQGIQSSQLFKDFEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL79</accession>
    <name>E3EL79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386325.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59911">
        <property type="protein sequence ID" value="ADO59911"/>
        <property type="gene ID" value="PPSC2_28610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6071"/>
    <dbReference type="HOGENOM" id="CLU_1601083_0_0_9"/>
    <dbReference type="OrthoDB" id="1820912at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="19672" checksum="C0DBA1C1CC7BEF6E" modified="2011-01-11" version="1">MKKIISNYIARVELANKELNFIDRNIEKKQDKICKLQEGIKKLQKRRQKIKYPSWVSEVIEVLAQQLAIKMNKHYKVFGPFGLRAETTIYLFDDESESIAEQSTWSVRITPGDLEKGEFFYDTDELTRETKLNSPGFLNGMKIVIKPLPETVDDIVEVLMYRKKIKGGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBZ1</accession>
    <name>A0A0D5ZBZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal-dependent hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324608.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3831"/>
    <dbReference type="EnsemblBacteria" id="AKA44295">
        <property type="protein sequence ID" value="AKA44295"/>
        <property type="gene ID" value="PPSC2_17910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3826"/>
    <dbReference type="HOGENOM" id="CLU_105789_4_0_9"/>
    <dbReference type="OrthoDB" id="1759689at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024775">
        <property type="entry name" value="DinB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12867">
        <property type="entry name" value="DinB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DinB_2" evidence="1">
        <location>
            <begin position="19"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="17476" checksum="84288A0A113F3979" modified="2015-05-27" version="1">MEAILQHLNFRITDVPSRIHTYSELDFSIRTRPNSWSKKEILGHLCDSALTNLQIFVRSQYESQPYSVLKYAQNHWVELMNYQNLSIDHILALWVILNKQVAVVIANIPEDKLLYLCDIGEEKLVTLEWLIKDYVEHLEHHLEQIFST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCD8</accession>
    <name>A0A0D5ZCD8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885907.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44202">
        <property type="protein sequence ID" value="AKA44202"/>
        <property type="gene ID" value="PPSC2_07640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1581"/>
    <dbReference type="HOGENOM" id="CLU_2602751_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="10590" checksum="9DB0C8BB44DAC877" modified="2015-05-27" version="1">MSKFEKNLIKYLSYGFFVGIYYSFIKGPTMSSSVNGIFKFYTVPTSTFIFRTLSISFLLSLIAGVVYTIVFLCIKGNKYIPQNNPKAKGADQSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCL9</accession>
    <name>A0A0D5ZCL9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44292">
        <property type="protein sequence ID" value="AKA44292"/>
        <property type="gene ID" value="PPSC2_17635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3771"/>
    <dbReference type="HOGENOM" id="CLU_2396876_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10161" checksum="7BE75532A3C8ACAD" modified="2015-05-27" version="1">MLLVRIEILTGTKDSSSLPYVKEGKLNCFFMANPSDNIISTHRSLAVPRSGKEDCQGVGAGGHIRTAAAHFVRISQRDIVNTETLYARNDGNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E487</accession>
    <name>E3E487_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bm3R1</name>
        <name evidence="3" type="ORF">PPSC2_12485</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371231.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56627">
        <property type="protein sequence ID" value="ADO56627"/>
        <property type="gene ID" value="PPSC2_12485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2647"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2684401_0_0_9"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8449" checksum="98BC4B5184DF4CFD" modified="2011-01-11" version="1">MVGCFLVVIELTAVKNFDNITIQDIADQANVNRGTIYLHYQDKYDLLNQIMETHINELKEIICSQKCMSANISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E497</accession>
    <name>E3E497_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Haloacid dehalogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cof</name>
        <name evidence="1" type="ORF">PPSC2_12530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371241.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2668"/>
    <dbReference type="EnsemblBacteria" id="ADO56637">
        <property type="protein sequence ID" value="ADO56637"/>
        <property type="gene ID" value="PPSC2_12530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2657"/>
    <dbReference type="eggNOG" id="COG0561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044146_0_2_9"/>
    <dbReference type="OMA" id="MIAYNGA"/>
    <dbReference type="OrthoDB" id="1374424at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000150">
        <property type="entry name" value="Cof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00099">
        <property type="entry name" value="Cof-subfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="31858" checksum="9124EFF921D2B75D" modified="2011-01-11" version="1">MIQAIFSDIDGTLLNSKHQITFDTKNTIQKVVGGNIPFVLVSARMPSGIFPLQQELNINAPVICYSGGLILGCNREILHSICLSKKSIKQIYDIVSDHYPSISFNLYGYDQWIVDNTQNPWVIQEAGIINGSPIQRVLSSYIEEDHDTHKILCMGPPEDVERLVQQIKNEVTGISVYKSKGTYLEIMDEMVSKSYAIQELEGIFNITHRESMAIGDNYNDMDMILYAGLGIAMGNAPEEVKKIADWVTSSNDEDGLKIGLEKYILSVWNDPVTLDIQTPKNCRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4K0</accession>
    <name>E3E4K0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Aspartate oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nadB3</name>
        <name evidence="5" type="ORF">PPSC2_13755</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56899.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885987.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01460"/>
    <dbReference type="EnsemblBacteria" id="ADO56899">
        <property type="protein sequence ID" value="ADO56899"/>
        <property type="gene ID" value="PPSC2_13755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2929"/>
    <dbReference type="eggNOG" id="COG0029">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043390_0_0_9"/>
    <dbReference type="OMA" id="DYHEMID"/>
    <dbReference type="OrthoDB" id="153138at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030664">
        <property type="entry name" value="SdhA/FrdA/AprA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027477">
        <property type="entry name" value="Succ_DH/fumarate_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11632">
        <property type="entry name" value="PTHR11632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="FAD_binding_2" evidence="4">
        <location>
            <begin position="14"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56899.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="488" mass="54510" checksum="5CC21EB9FF731298" modified="2015-05-27" version="2">MERNITSVEHYTPILIVGTGISGLAVAYYLSKNNIKYTITTKKNAPKQSNSFLAAANTRVPSENDINNIINLTINKCGADRSVIETLYRNSNIVISFFEELGISYEKTSFGIMPECLIKSQGGKKLVNCLLQHIEQPLCNKILIDLEKSDDGIIALFYDIQLDQFIRIYTNYLVLATGGYAGQFNYNDNSPGSTGETLILAKKIGARLKGMSTVMSHPWSIYNGRQILLGGVVSLSQGKIVDEKGIQLLKDEYISDAIARDDYHEMIDEILHFELDCIKQKKDMYLDMSHADETILNERFKKYGFSTKVVKNKRIKITPTMHYSSGGIEINANAEVINLNRVFASGEAQFNGDLGMGRIPGQAFAAGIVFGKLIADKIANEGVFNTQYPITFKDPLEPMQLYSKENNDFPIEEFQKKLSTLMVDLIAPDSSVVSLSLHKREIQESQNIILSSARGSGKRYEDILTLFFGYFVALEIIEDLEKKAFGIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4P0</accession>
    <name>E3E4P0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glnR1</name>
        <name evidence="2" type="ORF">PPSC2_13925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430683.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01580"/>
    <dbReference type="EnsemblBacteria" id="ADO56939">
        <property type="protein sequence ID" value="ADO56939"/>
        <property type="gene ID" value="PPSC2_13925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2975"/>
    <dbReference type="eggNOG" id="COG0789">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060077_9_0_9"/>
    <dbReference type="OMA" id="SIVMQLT"/>
    <dbReference type="OrthoDB" id="1661714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00552">
        <property type="entry name" value="HTH_MERR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15693" checksum="51B57960A8607D57" modified="2011-01-11" version="1">MGDEIRRNMALFPIGIVMKLTDLSARQIRYYEQHNLIVPARTSGNQRLFSFNDVERLLEIKALIEKGVNIAGIKQVMNPVTKESEEATVITADTEVKRREMSDTQLHRLLKQQLVAGKRPGQVSLIQGELSRFFNKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E503</accession>
    <name>E3E503_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fur family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fur3</name>
        <name evidence="4" type="ORF">PPSC2_15225</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Fur family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371801.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02845"/>
    <dbReference type="EnsemblBacteria" id="ADO57211">
        <property type="protein sequence ID" value="ADO57211"/>
        <property type="gene ID" value="PPSC2_15225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3250"/>
    <dbReference type="eggNOG" id="COG0735">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096072_5_1_9"/>
    <dbReference type="OMA" id="FEIYGTC"/>
    <dbReference type="OrthoDB" id="1630127at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07153">
        <property type="entry name" value="Fur_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002481">
        <property type="entry name" value="FUR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043135">
        <property type="entry name" value="Fur_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33202">
        <property type="entry name" value="PTHR33202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01475">
        <property type="entry name" value="FUR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="18738" checksum="90B6CBCF6B3920F5" modified="2011-01-11" version="1">MLTKDEIIATMSAQGLRITDQRKTLATLFSENEGYLSPKDVYEYMGKKYSGLSFDTVYRNLRVMQELGVLEQVSFEDGMKFKVSCNEHHHHHHMICLSCQKTLPISFCPMQMTDPTDQFQIVEHKFEIFGYCKDCQQKNGHTESNSDGGFRQTSSHTHSHGGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E565</accession>
    <name>E3E565_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Terminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xkdI3</name>
        <name evidence="1" type="ORF">PPSC2_16240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372011.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3469"/>
    <dbReference type="EnsemblBacteria" id="ADO57425">
        <property type="protein sequence ID" value="ADO57425"/>
        <property type="gene ID" value="PPSC2_16240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3468"/>
    <dbReference type="eggNOG" id="ENOG50339GM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_134957_0_0_9"/>
    <dbReference type="OMA" id="QGSRFIY"/>
    <dbReference type="OrthoDB" id="2001363at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010064">
        <property type="entry name" value="HK97-gp10_tail"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04883">
        <property type="entry name" value="HK97-gp10_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="164" mass="18852" checksum="CCB3A9834D285AE7" modified="2011-01-11" version="1">MTVHDFDGLARRFRRIADEGMERILRNIAEAAGETLLNLIIDEIDRQGLIDTGAMWQSFSRGDNNNVWEWDVDRNAITLELGSNLPYAQLVNDGYTIEKKHFVPGYWNGGGSFVYDPSAKTGFMAKPRSFIGRHYFDIAVEHLEGGMNQLIMRRLEVELERMLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5A4</accession>
    <name>E3E5A4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372050.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3508"/>
    <dbReference type="EnsemblBacteria" id="ADO57464">
        <property type="protein sequence ID" value="ADO57464"/>
        <property type="gene ID" value="PPSC2_16415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3505"/>
    <dbReference type="HOGENOM" id="CLU_2586428_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9328" checksum="5D7F55938E653D9F" modified="2011-01-11" version="1">MSTIQTRIYELNHFCNWITTNPDRVDADVRPAALDWLSGEISKLEKKQNARRVGRTLRVRAWLKSLVIIILSSFFPERKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5H3</accession>
    <name>E3E5H3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.89</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Tetrahydrodipicolinate N-acetyltransferase</fullName>
            <shortName evidence="7">THP acetyltransferase</shortName>
            <shortName evidence="7">Tetrahydropicolinate acetylase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dapH</name>
        <name evidence="9" type="synonym">glmU</name>
        <name evidence="9" type="ORF">PPSC2_17475</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>(S)-2,3,4,5-tetrahydrodipicolinate + acetyl-CoA + H2O = CoA + L-2-acetamido-6-oxoheptanedioate</text>
            <dbReference type="Rhea" id="RHEA:13085"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16845"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:58117"/>
            <dbReference type="EC" id="2.3.1.89"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; LL-2,6-diaminopimelate from (S)-tetrahydrodipicolinate (acetylase route): step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the transferase hexapeptide repeat family. DapH subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.89" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372273.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04815"/>
    <dbReference type="EnsemblBacteria" id="ADO57693">
        <property type="protein sequence ID" value="ADO57693"/>
        <property type="gene ID" value="PPSC2_17475"/>
    </dbReference>
    <dbReference type="GeneID" id="66576559"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3733"/>
    <dbReference type="eggNOG" id="COG2171">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_103751_0_0_9"/>
    <dbReference type="OMA" id="HLEYDRR"/>
    <dbReference type="OrthoDB" id="752123at2"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00022"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047200">
        <property type="term" value="F:tetrahydrodipicolinate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01691">
        <property type="entry name" value="DapH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019873">
        <property type="entry name" value="DapH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013710">
        <property type="entry name" value="DapH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08503">
        <property type="entry name" value="DapH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14602">
        <property type="entry name" value="Hexapep_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03532">
        <property type="entry name" value="DapD_Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4 7" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DapH_N" evidence="8">
        <location>
            <begin position="5"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="24837" checksum="B5BE217ACF4A02C7" modified="2011-01-11" version="1">MSIEMNTQEVINVIKNSKKKTPVKVYVKGALASASFGENVQAFISGDSGVVFGDWADIKPVLDSANAKEEDYVVENDRRNSAVPMLDLKGINARIEPGAYIRDMVGIGNNAVIMMGAVINIGVTIGEGTMIDMNAVLGGRVKVGNMCHIGAGVVLAGVIEPPSAQPVIVEDEVLIGANSVVLEGVRIGKGAVVAAGAVVTEDVPPYSVVAGTPARVIKQVDDKTKSKTEILKELRVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E609</accession>
    <name>E3E609_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gldF</name>
        <name evidence="7" type="ORF">PPSC2_20015</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372800.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07235"/>
    <dbReference type="EnsemblBacteria" id="ADO58228">
        <property type="protein sequence ID" value="ADO58228"/>
        <property type="gene ID" value="PPSC2_20015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4265"/>
    <dbReference type="eggNOG" id="COG1277">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081003_0_0_9"/>
    <dbReference type="OMA" id="MGLYAEE"/>
    <dbReference type="OrthoDB" id="1552415at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032688">
        <property type="entry name" value="ABC2_membrane_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12679">
        <property type="entry name" value="ABC2_membrane_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="95"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="129"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="216"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="240" mass="27022" checksum="BB0DF3B6730ADB27" modified="2011-01-11" version="1">MRRLFAVCQKELQAYLWTPTTYFALAVYMLLTGLLFYTNFVMYQPSILDYRLVLGDTLSMLVFVVPLLTMRLVAEEFRQGTDELLLTSPVSVTEIMMGKFLASLGMLLILVLCSLAYPVVMSFYGTLDWTLVFTSVIGLFMLGAAMMAIGLFASTLSQHQMMSAVVSFILLLVFWMLDSFGGQTGASAALQQWLEPFSLTARFDSFTKGLLNGADVLYYVTVAALFLLFSIQVVERKRWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E634</accession>
    <name>E3E634_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56719.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599790.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00560"/>
    <dbReference type="EnsemblBacteria" id="ADO56719">
        <property type="protein sequence ID" value="ADO56719"/>
        <property type="gene ID" value="PPSC2_12875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2744"/>
    <dbReference type="eggNOG" id="ENOG5032TMF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_153805_0_0_9"/>
    <dbReference type="OrthoDB" id="1951769at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56719.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="14492" checksum="50D75A871875BFA0" modified="2015-05-27" version="2">MCRYAMYGPYKDIFACFACRKVYKQTSRFEIPKEEYEGIVHVCPQCQTPMHDMGHDFQAPKQTDIKQWKKVELLYQNGYSYHSCGCDGPGYRPSRLQDVPGFLKEQRRFENEGEALLHRLLQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6I2</accession>
    <name>E3E6I2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">6-phospho-beta-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">celH</name>
        <name evidence="3" type="ORF">PPSC2_20075</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372814.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07305"/>
    <dbReference type="CAZy" id="GH1">
        <property type="family name" value="Glycoside Hydrolase Family 1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58242">
        <property type="protein sequence ID" value="ADO58242"/>
        <property type="gene ID" value="PPSC2_20075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4279"/>
    <dbReference type="eggNOG" id="COG2723">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001859_0_1_9"/>
    <dbReference type="OMA" id="KWMQWNY"/>
    <dbReference type="OrthoDB" id="654705at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="PTHR10353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="478" mass="56358" checksum="DF344CABF2848F4A" modified="2011-01-11" version="1">MAKHTIQIPPNFIMGAAASAWQTEGWSGKQEGQDSYLDLWYKNDRYVWHNGYGPAGATDFYNRYAEDIALMKQIGLTHYRTSINWSRFLTDYENIVVDETYADYMGRVIDELIASGVEPMICLEHYELPAYLLDKYEGWSSKHVVELFVKYAEKVFERYGDRVKHWFTFNEPIVVQTRVYLDALRYPYEQNTRKWMQWNYNKTLATAKCVQLFKAKNYSENGAKIGVILNPEVTYARSSAPHDQYAAHVYDLFYNRVFLDPLIKGEYPQELFELMSKHDIAFEATAEELALIKENTVDIVGINLYYPHRVKAQSKAWNENIPFHPSYYYEHFDLPGKRMNKSRGWEIYPKIVYDMGMRIKNEYNNIEWFVAENGMGIENEAVFKNEEHIIQDDYRIDFITEHLYYTLQAVAAGSNCTGYMLWAFTDNVSPMNAFKNRYGLVEINLENDRSRHLKKSGYWYQAVIKERLFVANLDEEYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6N2</accession>
    <name>E3E6N2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_20290</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372864.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58292">
        <property type="protein sequence ID" value="ADO58292"/>
        <property type="gene ID" value="PPSC2_20290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4326"/>
    <dbReference type="HOGENOM" id="CLU_2424185_0_0_9"/>
    <dbReference type="OrthoDB" id="1108236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="26"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="61"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="9460" checksum="EDB988372ED3E1E2" modified="2011-01-11" version="1">MTTTSLAHVVLGAVSAEEAGTGSGLFTTFMYLANSLGVALIGILFLSSLNHTLSDANLSDYIRAFIISVAVSGLLALAALICISFCYKNEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E770</accession>
    <name>E3E770_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phospholipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_23390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373461.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10880"/>
    <dbReference type="EnsemblBacteria" id="ADO58925">
        <property type="protein sequence ID" value="ADO58925"/>
        <property type="gene ID" value="PPSC2_23390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4952"/>
    <dbReference type="eggNOG" id="COG1502">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044580_0_0_9"/>
    <dbReference type="OMA" id="LNVKANH"/>
    <dbReference type="OrthoDB" id="300755at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025202">
        <property type="entry name" value="PLD-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13091">
        <property type="entry name" value="PLDc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="PLDc_2" evidence="2">
        <location>
            <begin position="320"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="498" mass="56332" checksum="49C6F2DFD97F07BA" modified="2011-01-11" version="1">MTKQNPLHSVPEYQRKTVHKGRALKIAILLLILWLIAVMLYQTHKPLPPFVSYESQEYSTNEVNFWTDLTYPTGDGSTVQHEGQILNRMLGIIDEAQQFIVIDLFLFNDYKHKGQHFPEVSAQMTNHLIAKKKAYPEMPIFFITDEVNTNYNSAPNPLLENMKQVGIQVVQTDVDPLRDSTPIYSAVWRTFFQWFGQHGTGWIPNLMASDGPDVTARSYLKLLNVKANHRKLVANEQTALISTGNVHDASAYHSNVALEVKGPIIGDILQTEQAVLDFSGGGQLPVYTPQAEPLVPSGKDSYRIKYLTEGKVYASVLNGIKQTKQGDSIHMGMFYLADRKILNSLLDASARGVNIQLLLDPNENAFGQEKIGIPNRPVAQELSDKSDGNIQIRWYHTTHEQFHTKLIYIAKAQGEHLIWGGSTNLTPRNLDDLNLENELWVAAPADSKLTRQVAAYFDKLWNNRGAEYSLDLAAYEDHSTFWKDIVYRLQDILGFTTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7A9</accession>
    <name>E3E7A9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373500.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5025"/>
    <dbReference type="EnsemblBacteria" id="ADO58964">
        <property type="protein sequence ID" value="ADO58964"/>
        <property type="gene ID" value="PPSC2_23575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4991"/>
    <dbReference type="eggNOG" id="ENOG5032R8D">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1077073_0_0_9"/>
    <dbReference type="OMA" id="YVRFNYA"/>
    <dbReference type="OrthoDB" id="965946at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="29352" checksum="ACE7411D4A953847" modified="2011-01-11" version="1">MYWVSTQHTPVAADELTNFEHTYGITLPIPYASFLTQYGPGTYCGLLVIERPDPQLLQSYADYELWTHNDNCPITAQQLGECVFIGSSIDGDFLAVHPQVEGLLWLPRHSEVITMKPLDVQAPFIDTLEHILRDEFGRIEPFPRYFEPVSLDRVATFLQFNPPETAEAYGSANPNDQALQVAPASIQVLAQRFKQHFDSNLWIENEHICLAFLQSLGGYVRFNYAYGREVAIIYESKAIALHDEVLSFLQKEHCQVVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Q2</accession>
    <name>E3E7Q2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Thiamine diphosphokinase</fullName>
            <ecNumber evidence="1">2.7.6.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tpk1</name>
        <name evidence="7" type="ORF">PPSC2_13560</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.6.2" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371460.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01245"/>
    <dbReference type="EnsemblBacteria" id="ADO56857">
        <property type="protein sequence ID" value="ADO56857"/>
        <property type="gene ID" value="PPSC2_13560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2886"/>
    <dbReference type="eggNOG" id="COG1564">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044237_1_0_9"/>
    <dbReference type="OMA" id="ITYCPEG"/>
    <dbReference type="OrthoDB" id="1628990at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030975">
        <property type="term" value="F:thiamine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004788">
        <property type="term" value="F:thiamine diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006772">
        <property type="term" value="P:thiamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07995">
        <property type="entry name" value="TPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006282">
        <property type="entry name" value="Thi_PPkinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007373">
        <property type="entry name" value="Thiamin_PyroPKinase_B1-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036371">
        <property type="entry name" value="TPK_B1-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007371">
        <property type="entry name" value="TPK_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036759">
        <property type="entry name" value="TPK_catalytic_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04265">
        <property type="entry name" value="TPK_B1_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04263">
        <property type="entry name" value="TPK_catalytic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00983">
        <property type="entry name" value="TPK_B1_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63862">
        <property type="entry name" value="SSF63862"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63999">
        <property type="entry name" value="SSF63999"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01378">
        <property type="entry name" value="thi_PPkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPK_B1_binding" evidence="6">
        <location>
            <begin position="140"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="23482" checksum="A00C6BBE54482D16" modified="2011-01-11" version="1">MMKKRAIVFSGGRLNEEDLQQIQPDDFIIGADKGALFLIEHGITPHVSVGDFDSITSEEQEQVKSASQRMIACDPVHKDLTDTELALEIAMEEQVDHVLFLGVTGTRMDHTLANVQILVRAMQHHISCAIMDAHNYIELTESTLEIQPMGYTYTSLIPMTAEVTGIQLEGFMYPLHNATLKMGQSRGVSNKLTAAKGTISIKSGLLLVIQSKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E814</accession>
    <name>E3E814_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Segregation and condensation protein A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">scpA</name>
        <name evidence="5" type="ORF">PPSC2_14825</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Component of a cohesin-like complex composed of ScpA, ScpB and the Smc homodimer, in which ScpA and ScpB bind to the head domain of Smc. The presence of the three proteins is required for the association of the complex with DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="4">Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the ScpA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57127.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040103467.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02460"/>
    <dbReference type="EnsemblBacteria" id="ADO57127">
        <property type="protein sequence ID" value="ADO57127"/>
        <property type="gene ID" value="PPSC2_14825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3164"/>
    <dbReference type="eggNOG" id="COG1354">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038686_3_1_9"/>
    <dbReference type="OrthoDB" id="959677at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01805">
        <property type="entry name" value="ScpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003768">
        <property type="entry name" value="ScpA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023093">
        <property type="entry name" value="ScpA-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33969">
        <property type="entry name" value="PTHR33969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02616">
        <property type="entry name" value="SMC_ScpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 4" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 4" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57127.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="30884" checksum="718524A7B08D7960" modified="2015-05-27" version="2">MTVVNYKLETFEGPLDLLLHLIDKAEIDIQDIPISDITDQYMAFLHSMQELELDITSEFLVMAATLLSIKSKLLLPKPPVMEYDDLDYYEEEDYDPREELVRKLVEYRKYKGIARHLSEREWERSLIYGKEPEDLSAFLPTEPANPVHGLHASDLVAAFQRALRKAERRTTVTRVHRDEISVKDRIRQVIGALEMVGTGGRLLFSKLMHEDMYRHEVVVTFLAILELMKMKQIFCYQEKLFDDIVMEWRGDLRVNGLSEAEINY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E846</accession>
    <name>E3E846_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 14">Dihydrolipoyl dehydrogenase</fullName>
            <ecNumber evidence="3 14">1.8.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">lpdV</name>
        <name evidence="17" type="ORF">PPSC2_14975</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 14">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NAD(+) = (R)-N(6)-lipoyl-L-lysyl-[protein] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15045"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="1.8.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12 14">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="12 14">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="14">The active site is a redox-active disulfide bond.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.4" evidence="3 14"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371752.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02610"/>
    <dbReference type="EnsemblBacteria" id="ADO57159">
        <property type="protein sequence ID" value="ADO57159"/>
        <property type="gene ID" value="PPSC2_14975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3196"/>
    <dbReference type="eggNOG" id="COG1249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016755_0_3_9"/>
    <dbReference type="OMA" id="WASMLND"/>
    <dbReference type="OrthoDB" id="267896at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004148">
        <property type="term" value="F:dihydrolipoyl dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006258">
        <property type="entry name" value="Lipoamide_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01350">
        <property type="entry name" value="lipoamide_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6 12 14" id="KW-0274">FAD</keyword>
    <keyword evidence="5 14" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8 12 14" id="KW-0520">NAD</keyword>
    <keyword evidence="12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 14 17" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10 14" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="16">
        <location>
            <begin position="6"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="15">
        <location>
            <begin position="354"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="11">
        <location>
            <position position="452"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="150"/>
            <end position="152"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="187"/>
            <end position="194"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="210"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="319"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="13">
        <location>
            <begin position="42"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO57159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="473" mass="50747" checksum="144B98DD9C58FEAC" modified="2011-01-11" version="1">MTIHCDVAILGGGTGGYVAAIRAAQLGKEVVIIEKDKLGGTCLHRGCIPSKALLRSAEVYATIKESAQYGIETSGAQLVFPKVQERKEAVVEQLHQGVQFLMRKNKITVLSGKGRVIGPSIFSPKSGAVAVELEDGEMETIVPAHLIIATGSRPRVLPGLEPDGEFILSSDEALTMENLPASLIIVGGGVIGVEWASMLNDFGVEVTVVEAANRLIPTEDEDVSREMQRLLTKRGVKVLTGAQVLAETYGKDEEGVQIDVQKGEETETLSVSKLLISVGRQANVENIGLENTDIRVERGFISVNEHLQTNEPHIYAIGDCIGGLQLAHAASHEGLQAVHHLAGEEFHSVPNYMIPRCIYTRPEAASVGLTEQEARERGHQVKTGKFPFQAIGKSLVYGSRDGFVKVVADQQTNDILGVHMIGTHVTDLISEAALAQLLDATPWEVGQLIHPHPTLSEILGEAMLAVDGQAIGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8D1</accession>
    <name>E3E8D1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Malate dehydrogenase</fullName>
            <ecNumber evidence="9">1.1.1.38</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ykwA</name>
        <name evidence="9" type="ORF">PPSC2_15760</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="5">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="5">Divalent metal cations. Prefers magnesium or manganese.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the malic enzymes family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.38" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57323.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014600041.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03455"/>
    <dbReference type="EnsemblBacteria" id="ADO57323">
        <property type="protein sequence ID" value="ADO57323"/>
        <property type="gene ID" value="PPSC2_15760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3364"/>
    <dbReference type="eggNOG" id="COG0281">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011405_5_2_9"/>
    <dbReference type="OrthoDB" id="654531at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004471">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008948">
        <property type="term" value="F:oxaloacetate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015884">
        <property type="entry name" value="Malic_enzyme_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012301">
        <property type="entry name" value="Malic_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037062">
        <property type="entry name" value="Malic_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012302">
        <property type="entry name" value="Malic_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001891">
        <property type="entry name" value="Malic_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00390">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03949">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000106">
        <property type="entry name" value="ME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00072">
        <property type="entry name" value="MALOXRDTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01274">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00919">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00331">
        <property type="entry name" value="MALIC_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="malic" evidence="8">
        <location>
            <begin position="82"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="Malic_M" evidence="7">
        <location>
            <begin position="274"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="250"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000106-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000106-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57323.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="572" mass="62599" checksum="F203C85D87751BCD" modified="2015-05-27" version="2">MRAFHVTEDGTIETKLTGKDLLANPLLNKGVAFTLEERQQLGLDGLLPPTILTIEEQVQRVYEQFQSQPDNLRKNVALNDLFNRNTVLYYRLLSEHLSEMLPIVYTPTVGQAIQEYSHEYHKPGGMYLSIDNLAGIKEAFKNLNLGPDDIDLIVATDSESILGIGDWGVGGINISIGKLAVYTAAAGIDPSRVLAVVLDAGTNNEKLLEDPLYMGNRHKRVRGEQYDQFIDTYVQAALSSFPNALLHWEDLGNVNARNIINKYGNHILTFNDDIQGTGAVTLAGVMSGVQLSGIPLSKHRVLVFGPGAAGIGNADQISAAMMLEGLSEAEARRNFWAYDYRGLLTNETEGLFPFQVPYVRDAAECRDWEHAEDGKIPLLEVIRRVKPTIMIGTSGVAGAFSEEIVKEMAKHTERPIIMPMSNPTPLAEATPEDLIHWTEGKALIATGSPFEPVIYNNIKFEIGQSNNAFVFPGLGLGAIVVKSKIITDSMFAAAAHAVAQMVDLSQPGASLLPKINELREVSEAVAVAVAKAAVQDGVARHQPDDIVQAVRESMWECKYKPIKQYGQEAVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="80" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G0</accession>
    <name>E3E8G0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase</fullName>
            <ecNumber evidence="8">6.3.2.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Meso-A2pm-adding enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Meso-diaminopimelate-adding enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">UDP-MurNAc-tripeptide synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">UDP-N-acetylmuramyl-tripeptide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 13" type="primary">murE</name>
        <name evidence="13" type="ORF">PPSC2_16630</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + meso-2,6-diaminoheptanedioate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate</text>
            <dbReference type="Rhea" id="RHEA:23676"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
            <dbReference type="ChEBI" id="CHEBI:83905"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="8 9">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="8">Carboxylation is probably crucial for Mg(2+) binding and, consequently, for the gamma-phosphate positioning of ATP.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the MurCDEF family. MurE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.13" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372094.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03965"/>
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        <property type="gene ID" value="PPSC2_16630"/>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.3549"/>
    <dbReference type="eggNOG" id="COG0769">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022291_4_1_9"/>
    <dbReference type="OMA" id="CFMEVSS"/>
    <dbReference type="OrthoDB" id="1861122at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="term" value="F:ATP binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="term" value="F:magnesium ion binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="project" value="InterPro"/>
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        <property type="term" value="F:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="term" value="P:cell cycle"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="P:cell division"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="P:cell wall organization"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="P:peptidoglycan biosynthetic process"/>
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        <property type="term" value="P:regulation of cell shape"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="Folylpolyglutamate_synth_CS"/>
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        <property type="entry name" value="Mur-like_cat_sf"/>
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        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
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        <property type="entry name" value="Mur_ligase_cen"/>
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        <property type="entry name" value="MurE/MurF_N"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF63418"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="murE"/>
        <property type="match status" value="1"/>
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    <dbReference type="PROSITE" id="PS01011">
        <property type="entry name" value="FOLYLPOLYGLU_SYNT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0131">Cell cycle</keyword>
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    <keyword evidence="4 8 9" id="KW-0133">Cell shape</keyword>
    <keyword evidence="7 8 9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 8 9" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase" evidence="10">
        <location>
            <begin position="24"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_M" evidence="12">
        <location>
            <begin position="106"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="11">
        <location>
            <begin position="334"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-MurNAc-L-Ala-D-Glu binding" evidence="8">
        <location>
            <begin position="150"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Meso-diaminopimelate binding" evidence="8">
        <location>
            <begin position="409"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Meso-diaminopimelate recognition motif" evidence="8">
        <location>
            <begin position="409"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
        </ligand>
    </feature>
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        <location>
            <begin position="108"/>
            <end position="114"/>
        </location>
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        <ligand>
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        <location>
            <position position="385"/>
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        <location>
            <position position="464"/>
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            <name>meso-2,6-diaminoheptanedioate</name>
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        <location>
            <position position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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    </evidence>
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        <source>
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        <source>
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            <dbReference type="RuleBase" id="RU004135"/>
        </source>
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    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01225"/>
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    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
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            <dbReference type="Pfam" id="PF08245"/>
        </source>
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        <source>
            <dbReference type="EMBL" id="ADO57509.1"/>
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    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="495" mass="53863" checksum="90567C185412AB1A" modified="2011-01-11" version="1">MQLQQLASLLAVSRVMGDGTVDCRGIGADSRRVQPGDLFLCLPGFTVDGHDYAGQAVASGAAALVVERELDVPVPQLVVKDARHAMAVLADYMFDSPSRRMRMIGITGTNGKTTITYLIEKIMQDAGVNTGLIGTIQMRYNGQSYPMSGTTPEAVELQRYLGNMAEQGVQCCVMEVSSHALEQGRVKGTDFRTAIFTNLTQDHLDYHNTMEEYRAAKGLLFSRLGNAFSRDASNSKYAVLNADDPASSYLQAQTAAQVITYGVEKDSDVQASRITISAKGTSFHVSTFKGETDIELRMVGKFNVYNALAAISAALLEGISLVDIKRSLESIAGVDGRVEPVDAGQPFAVIVDYAHTPDGLENVLRTVKEFATGKVWCVFGCGGDRDRTKRPLMGKIAARYSDHSFITSDNPRTEDPIVILKDIEQGLIDEGVPAERYELIVDRRTAIHKAVEMASPDDVVLIAGKGHETYQLIGKTVHEFDDRIVAKEAIRGLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8M5</accession>
    <name>E3E8M5_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3780"/>
    <dbReference type="EnsemblBacteria" id="ADO57734">
        <property type="protein sequence ID" value="ADO57734"/>
        <property type="gene ID" value="PPSC2_17670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3778"/>
    <dbReference type="eggNOG" id="ENOG503317T">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112848_0_0_9"/>
    <dbReference type="OrthoDB" id="1968333at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="24642" checksum="6530170D69B508CC" modified="2011-01-11" version="1">MEFSEVIDFLSNDNSYWSSRGHEEIDIPFDVTPSEYLSFAEFDLESGTEKHSLINALSNAKRSLDCQIDCLMIAFGFFGNSKKWNVPKKIETLKNLGIIAPRILNKINSVRNLVEHEFVVPNKEQVSDFIDIVALFNASTEKHIFNFPGDSQIEHDLIKEVFLDIKFKRNQRNIKIEVREKGVTDRQIFNIDSSHDNYIIFMKHYIENFSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8S7</accession>
    <name>E3E8S7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydaM</name>
        <name evidence="3" type="ORF">PPSC2_17915</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05240"/>
    <dbReference type="EnsemblBacteria" id="ADO57786">
        <property type="protein sequence ID" value="ADO57786"/>
        <property type="gene ID" value="PPSC2_17915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3827"/>
    <dbReference type="eggNOG" id="COG3706">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_11_4_9"/>
    <dbReference type="OMA" id="DEMYFSF"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="195"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="123"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="37429" checksum="1D0C077BB6C4EC36" modified="2011-01-11" version="1">MDIQLDKAPCGYFSISDAGIIQSVNQTLLDMLLYEHDQLLGRPIETTMSVTNKLFFHTYFYPYIQLYGRVDEMYFSFRTSDRQDVPVLLNGVRQERNGEAVIDCVVLMMRKRIEHEKDILQTKTKLQELYQATNEANQKLERLHAEYEIKQQELVRINLQLETMASTDPLTGLKNRRYFQDQLLVSLASFQETGIPFSLLIIDIDRFKSINDTYGHPVGDLVLTNLAELLQSMSREMDIVARYGGEEFVIILPGNDQEEAIRTAERYRSMTASRDWGEYSITVSIGVATVTQADTEQSIVHQADFALYASKSGGRNRVTHSASLVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E933</accession>
    <name>E3E933_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Endospore coat-associated protein YheC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yheC7</name>
        <name evidence="3" type="ORF">PPSC2_24820</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59240.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886073.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12310"/>
    <dbReference type="EnsemblBacteria" id="ADO59240">
        <property type="protein sequence ID" value="ADO59240"/>
        <property type="gene ID" value="PPSC2_24820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5261"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_2_0_9"/>
    <dbReference type="OrthoDB" id="1740489at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="31"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59240.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="30301" checksum="063FB43BD6101B23" modified="2015-05-27" version="2">MHIHVVCAKTQQNRGIFVPIGKMIQYKEMQQHPILRSHLPETRWITNARTLRMLDTYRTVFIKPNYGSGGTGIIRAKKVGRRYEVRCGSSRRVVRSHAVRRAIRSYRRPHRRYLVQQGLKLAKYKGSIFDARVYMQKPDSEWVISGVTGRVAAPRKVVTNYRKGGHAAPLSKVLLRVFKNDRAKMKEILDQIIELSRIIADTIDKNHPVRELGIDLAVEKSGQIWIIEANPHPGHMLFRQLPNHKMIRNILRNKRRIHHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E976</accession>
    <name>E3E976_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Peptide synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pksM3</name>
        <name evidence="10" type="ORF">PPSC2_15880</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57349.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324524.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3392"/>
    <dbReference type="EnsemblBacteria" id="ADO57349">
        <property type="protein sequence ID" value="ADO57349"/>
        <property type="gene ID" value="PPSC2_15880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3390"/>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3321">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_8_2_9"/>
    <dbReference type="OrthoDB" id="1123553at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010071">
        <property type="entry name" value="AA_adenyl_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032821">
        <property type="entry name" value="PKS_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013968">
        <property type="entry name" value="PKS_KR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16197">
        <property type="entry name" value="KAsynt_C_assoc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08659">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="594"/>
            <end position="672"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="1663"/>
            <end position="1738"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1741"/>
            <end position="1769"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1744"/>
            <end position="1758"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="632"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="1698"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57349.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="3710" mass="414990" checksum="01C51EDC6806DD8E" modified="2015-05-27" version="2">MTRKHDQRSDLNIPIVSFMETCRQFPETELFTFENEGEHPQVLTGTTLLLQVQTLGNILMKELAAQERALLVFPQGLGYISSMLACFYANIVAIPTPITAAEPDEKMLEKIKPIQTDSEAVCIITNTAFKAFLQTQPEYRTFRILNIDEIFQKSAAHVDMKMRMPAPEDMALLLYTSGSTSLPKGVILSHRCLMNQVKAKQWRIDQNSRIVSWMPQFHAFGLQNNILVPLFNGASSILLPPESFAKNPEHWIQMIDKYQATHTAAPNFAFDYCCSTLDIASLQEYSLHHLQAIICAGEPIRKESYENFIHNFRALGLKEDIFCPLLGLSELCPVTSVKPGQSMRFLNLDIPSLEQRRVQYTDEKNPSKTVVSCGEIEAPTEIRIVHPESHMQCLPGEIGEIWIKSDRTAEGYLNRKEETDSTFEAVLSNTQEDGFFRTGDLGFIADNHIYVIGREKEVIIIHGKNHHAVDIEWTIQKNMPELTLPIAVFSAEINGQEKVIVVQEIEAPLHQQEYKRLVENMLNAVSGTHQLEIYDIYLLPKGSIPKTGSGKIQRKVCRNAYIKQELRALYQYRSTLSTAHSEIGETDVTINAVSLIQLKIQEYMVQFLHGELNLESEAMDLNKNIHGYGIDSILVMKLIRGIEKSYPIKVNAREILEYPTIQLLSAYLAKKIEKDKPVVEAKTETILHGLQRNPLSEVQKGLWLLHKMSPEINAYNVPICLRFNTKVEIENVKQAFHTVLEQYPILNSVIEEENGTPYQKLEPAQPFNMQVEDISSLKADEIMPFIRSKAKQPFALEQDSMMRVYLMSRSEQEHFILVVIHHIIFDGSSFVLFIQSFLDAYKDLVRGNRPIVLPPAASYNDFVEWEQAMLASAEGEKHFSYWKQQLSGALPTLELPYSRSGFLTPSMEGQTYTKRLPVDWVNRVKSFARTQYMSLSTVLLGMYVILLNQYSRQEDIIVGMPVMVRPEERFDQLIGYFVNMLPIRSKVSETETFLDFMKKLQMTVVNGMDHAPYPFPALVRALNVPRLLASSPVFQTVFSYQNYLQTSSLQQLCAPYSDSFTVELVEEIHQEGEYELVLELLEQEEEMTLNIKYRSGLFDESTIVQMAERYIGLAEALMSNPTGALQDYSVLLQEEKNSILYDWNATEVSYPDKCFPELFIKQARKTPEAIAVVYEEQSLTYRELKEKSTLLAIYLQNQGVTPDTLVGICMERSLEMVIGLLGILLAGGAYVPLDPDYPEDRLEYMLQDSNASLVITQSGLLEKVSRLAGSNVNCIVLDNDWDLLTSSVKGRKTLKREVQSSHLAYVIYTSGSTGKPKGVMIPHKALTNFLLSMAEKPGITEQDKLLAVTTYCFDIAGLELYLPLIKGAQCYVCSSEKAKDAERLKQEIQKIKPTIMQATPVTWTMLFQAGWKNEENMKMLCGGEALSETLKSYFVHNNGDAWNMFGPTETTIWSTIQTITADKPLSIGKPIANTQIYILDQHLRPVPIGLPGELFISGSGLARGYLNQPVLTDEKFIDNPFKPGTKLYRTGDLCKWLSDGSIEYLGRMDYQVKIRGFRIELSEVEGQVRTYPGIDECVVVAKEQGEDKQLVAYYLRNDSEFGKSSLDPKEVRNYLKAFLPYYMIPAFFIELDKLPLTPNGKIDRKELMSRKVELATATRKIHLPQSDVEHQVLTIWKKLLDVDHLSTDDAFFDVGGNSFTAAEMVRKIKDKLECDISVTALFKYPTIRELSAYIMKVKGEAPASATEQTDTTENTISQGIDSKEDEHKPSYPDYYEDSIAIIGISSLFPGAKNHVEFWSNLRAGVESVRYFSEDELAQLGLEREIVEHPNYVPGQCTIEGKEYFDPEFFNLSQKNAEFMDPQMKLLLQHAWKAVEDAGYVSKEIPETSVYMSASSSFYQSFIPNLASQSPNVLRNADEYVTWILAQGGTIPTMISHKLGFKGPSLFVHSNCSSSLVGLRLASQSLLSGEAKYALVGASTIFPFNSLGYVYQPGLNFSSDGHIKAFDDSADGMIGGEGVGVVLLKKTLDAVRDGDHIYTILRGVGVNNDGTDKLGFYAPSVKGQSEVIQKTIESTGIHPETISYIETHGTGTKLGDPVEFAALNDTFRQYTAKKQFCGIGSVKTNIGHLDTAAGLAGCIKVALSLYHNEIPPTLNYDTPNTDIHLSDSPFYVVDKLRKWEHASVPHRAALSSFGIGGTNAHAIFEQFIANDEPERSKSSLMNDAADYLIPLSAKNHQRLKAYAGDLSAFLTASQEINLSNVSFTLQTGRTAMKSRVAFIVKNTSELVQKLESFANGQEHIENCWRGEHNQQDSVQWFEQEEVFKELVSQWISNREMNKLAELWAKGFYIDWKLLYYDLRPKRISLPTYPFAQRRCWAPEVEAGAARARAAVEAPVTVASHTLMFEPVWKEQNVPPEVEAPAYDRRIILLCEPDEALPERLEARVNGAAQVLAFSSGKSRVDERFQAYAVQAFESIQSILKDKPSGRALVQLVVAAAGEGQLFSGLSGLLKTARLENPKLIGQLIEVEQGESAESLLAKLEENSCSPVDGWIRYEGGQRKTACWNKFEPSREEEKLPWKDGGVYLITGGSGGLGLLVAEELVRHTRAATLILTGRSPLDENRQIRLKELESLGARVVYKQGDITDRNTVISLLESIQEEFGRVHGIIHCAGVIHDNFILKKSREEFIEVLGPKVQGLVHLDEASSGQDLEFFVLFSSISGSLGNPGQADYATANAFMDAYAAYRNTLVEAQQRRGRTVSIRWPLWKEGGMRIDADTEKLMRQNMGITALQTESGIQALYQCLSSGKEQVMVMEGEPEKIEAYLAKAASQVDVRTIEASAPKLDTASLYDKTLFHLKALLGEVTRLSVSSIEAHEPLERYGIDSIMITQLNAMLAESFGELSKTLFYEYQTLRALAEYLVAEYVPECMQWVGMSPDKERVEETAAATQCTEEESTPVAGQTIAETVTTKSSRSYVKPVRSYAEFGAEETREPIAIIGMAGKYPGSKDMNEYWENLKAGKDCIGEIPQERWTLEGFFQSNKQEAVADGKSYSKWGGFIEGFAEFDPLFFNIAPREALSMDPQERLFIEACWEAMEDAGYTREQLAVQHNSRVGVFAGITKTGYELYGPELWKMGAKIFPQISFSSVANRISYLFNLQGPSMPVDTMCSSSLTAIHEACEHLYRGECELAMAGGVNLYLHPLSYVGLCANQMLSIDGQCKSFGKGGNGFVPGEGVGVVLLKPLSKAIADGDPIHALIRGTSINHGGKTNGYTVPNPTAQGELIRSALERAGVHARTISYIEAHGTGTELGDPIEVTGLTQAFRKDTADKGFCAVGSVKSNIGHLEAAAGIAGIGKIVLQMKNRTLVPSLHAQELNPNIPFEQTPFVVQQELEEWKRPVVELNGETREYPRMAGISSFGAGGANAHVIIEEYVSEEKAPIRVTAHHPVIIVLSAKNEDRLKQQVERLLSVIGKGEVTESNLADAAYTLQVGREAMEERLAVIAESMPALVEKLEGFLEGHDGISELYRGQVKRNKEALSALLEDEDMEKMIAAWIGKRKYTKIVDLWVKGLAMDWSMLYGDVKPQRMSLPAYPFAKERYWITDIKTKQASFESTKSVQPTNIFIDQKASTVAANISQMNGKESDDPNSEAIPSYIQNIQSHISTSVKMKKMPDISYLAAEYERIPSTMVDNQAYSEQDGATRGTNRMRRLTDEGNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9R5</accession>
    <name>E3E9R5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidylprolyl isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_18235</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372434.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3903"/>
    <dbReference type="EnsemblBacteria" id="ADO57855">
        <property type="protein sequence ID" value="ADO57855"/>
        <property type="gene ID" value="PPSC2_18235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3896"/>
    <dbReference type="eggNOG" id="COG2998">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_993377_0_0_9"/>
    <dbReference type="OMA" id="MIPLRAV"/>
    <dbReference type="OrthoDB" id="960114at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168091" evidence="1">
        <location>
            <begin position="28"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="57"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="31508" checksum="B1382474BCB8ECAF" modified="2011-01-11" version="1">MKLCKSIVLFSLAALLLFSLNMGNVDAKATVIKAPVILKINQYYILYTSPDAPYIDKQQRFMIPLRAVSELLGATVNYDVPKKTATISWDHKNIEVTINSNNVTYNGKNTKIDTVPVLKQKQVFIPAKVLLDGLNIKGSWEDQLLTIKDNKFKKSKVISYLEGGYDPNTIPLSTDIDTNKIRPLSYELTLPGDGSSSKMATLSITARNISGKDLKLGSEDLRPTFITDISYQYDKQDRDRPAVQAGATFTRTWNKIDLSSTSSSNNFQSNPLKYIVAIGNTKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z9</accession>
    <name>E3E9Z9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lacE3</name>
        <name evidence="2" type="ORF">PPSC2_19570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58132.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324661.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06790"/>
    <dbReference type="EnsemblBacteria" id="ADO58132">
        <property type="protein sequence ID" value="ADO58132"/>
        <property type="gene ID" value="PPSC2_19570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4172"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_2_3_9"/>
    <dbReference type="OrthoDB" id="534010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168094" evidence="1">
        <location>
            <begin position="26"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58132.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="47876" checksum="95AC527A9893684B" modified="2015-05-27" version="2">MKTVQWLILCLAFLTMISGCSGSLSSEGQPSETNLSNGKKITLTLWYWNRSIDDELLAQAEKQFPDIELKTQKIGGDFKAKLKTTLAARSGEPDIVALNDWMVELFPSADRFYDLRELGADRLKDQYLEWKWNQGITPDGKMIAFPMDTGPTALFYRSDLFEQAGLPSDPEQVSSSIRTWDDYMAAGEQLRQKFGSRSFLADNIVNVYNQVLAQHTNLYFKPDGSYVGNQSPDIRLGWKTAVDFHRKHLLANADGWTPEWNASVNNGKIASFVGAIWMKQVLTEAAPDTAGKWRVARAPGGDGNLGGSFISILKSSQHPKEAFEVLTWLQNPEHQLEAYHKIGLFPSTPGVYDDPVMETPEPFFGGQATGLIFAASARHVKSSYFGERYPVIHGIVTRRLSNVAKQDADPDALWSETMQRIERELQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA39</accession>
    <name>E3EA39_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yvbV3</name>
        <name evidence="5" type="ORF">PPSC2_20455</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372902.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4381"/>
    <dbReference type="EnsemblBacteria" id="ADO58331">
        <property type="protein sequence ID" value="ADO58331"/>
        <property type="gene ID" value="PPSC2_20455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4363"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033863_5_0_9"/>
    <dbReference type="OMA" id="AYGLFFY"/>
    <dbReference type="OrthoDB" id="1515911at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="97"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="124"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="180"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="207"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="244"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="269"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="4">
        <location>
            <begin position="10"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="4">
        <location>
            <begin position="151"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="290"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="33880" checksum="1EE2E90D053F637C" modified="2011-01-11" version="1">MKKLTPKATLWLVLILVMVWGINWPLTKLALPDTPPIFFSGIRTLLGGVILLLFAMRNRKTLRLRQNAWTYLVLAIFNIAGYYGLQTVGLRYLPAGLFSTLVFFQPILLGLFSWLWLGERMFPLKVIGLVLGFGGVIVISSGGMAGHLSVLGIVLGLASGLCWALGTIYMKKKSKQLDSIWAVTMQLILGGVLLNGIGFTTEKWSDIHWTASFIAILLFISIFVIAMGWLIYFKLIDNGDAGTVGSYTFMIPVLSTVFSMVMLRESLTLTFVVGLVLIAVSVYLVNTASPGKRANQSSKADETNSCTNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA71</accession>
    <name>E3EA71_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Tryptophan--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Tryptophanyl-tRNA synthetase</fullName>
            <shortName evidence="8">TrpRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">trpS</name>
        <name evidence="10" type="ORF">PPSC2_20610</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of tryptophan to tRNA(Trp).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + H(+) + L-tryptophanyl-tRNA(Trp)</text>
            <dbReference type="Rhea" id="RHEA:24080"/>
            <dbReference type="Rhea" id="RHEA-COMP:9671"/>
            <dbReference type="Rhea" id="RHEA-COMP:9705"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78535"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 9">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.2" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372932.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07860"/>
    <dbReference type="EnsemblBacteria" id="ADO58363">
        <property type="protein sequence ID" value="ADO58363"/>
        <property type="gene ID" value="PPSC2_20610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4396"/>
    <dbReference type="eggNOG" id="COG0180">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029244_1_1_9"/>
    <dbReference type="OMA" id="GWGQFKP"/>
    <dbReference type="OrthoDB" id="951354at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004830">
        <property type="term" value="F:tryptophan-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006436">
        <property type="term" value="P:tryptophanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00806">
        <property type="entry name" value="TrpRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00140_B">
        <property type="entry name" value="Trp_tRNA_synth_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002306">
        <property type="entry name" value="Trp-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024109">
        <property type="entry name" value="Trp-tRNA-ligase_bac-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01039">
        <property type="entry name" value="TRNASYNTHTRP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00233">
        <property type="entry name" value="trpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="10"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="192"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="9"/>
            <end position="11"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="17"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>L-tryptophan</name>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="144"/>
            <end position="146"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="183"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="192"/>
            <end position="196"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="36574" checksum="F6DB8EE2135DC3E1" modified="2011-01-11" version="1">MKIVLSGIQPSGQLTLGNYIGAMKNFVKLQEDHQCYFMVPDLHAITVPQEPAQLREQSEAVAALFIAAGINPEKSNVFLQSHVPQHAELGWLMTTLTNMGELERMTQFKDKSAGKDSVGAGLFVYPSLMAADILLYNADLVPVGDDQKQHLELTRDLAGRFNHRYGDYFTVPEPYIPEVGARIMSLDDASKKMSKSNPNAGSFIALLDDPKVIRKKISRATTDSGSEVKYDPANKPEISNLMSIYSQCSGLSLQEVQDRYEGQMYGTFKKELAETVVAMLEPIQQRYRDIRESGEIGHILAQSAERAQEAAEVTLSAVKERMGFLPRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAB5</accession>
    <name>E3EAB5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cadmium transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ziaA</name>
        <name evidence="13" type="ORF">PPSC2_21495</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373101.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08690"/>
    <dbReference type="EnsemblBacteria" id="ADO58533">
        <property type="protein sequence ID" value="ADO58533"/>
        <property type="gene ID" value="PPSC2_21495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4570"/>
    <dbReference type="eggNOG" id="COG2217">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001771_6_2_9"/>
    <dbReference type="OMA" id="FAQPWET"/>
    <dbReference type="OrthoDB" id="237367at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019829">
        <property type="term" value="F:ATPase-coupled cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017969">
        <property type="entry name" value="Heavy-metal-associated_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027256">
        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00941">
        <property type="entry name" value="CDATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="SSF55008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01525">
        <property type="entry name" value="ATPase-IB_hvy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01047">
        <property type="entry name" value="HMA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="191"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="214"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="416"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="448"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="758"/>
            <end position="777"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="12">
        <location>
            <begin position="9"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="111"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="111"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="155"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="807" mass="86805" checksum="82DECDD7586873C1" modified="2011-01-11" version="1">MDALKRNERHEWVLEGLDCANCALKIENGVSKIEGVLDCSVNFVTKTLTMTTTSDQKEEVFRQTERKVHRLEPHVRMVAKSAGGRLREDSRSGVGAVEASCTEDCACGHEHEGEGHNHNDGKHAAHSHGGHSHEAHGAHDGHDHGNHAHMHHNHHAVRDHGEATHAHSHSYDDDSHAGHTHDHGTDGMRRMIARLSIGAVIAAVAWWLPVEGVGKLALFLVAYIIVGGDVVLQAARSLVRGMAFDEYFLMTLATVGAFAIGEYPEGVAVMFFYQIGELFQGIAVNRSRKSISDLMDIRPDYANLKTAESVRRVSPEEVRIGDLIVIKPGEKIPLDGKVVEGKSHVDTSALTGESVPRTVEPGSSVMSGFVNTNGLLTVEVSKEFGESAVSKILELVQNASAKKAPTEKFITKFSRYYTPVVVIVALLLAVVPPLVVPGAQFADWIYRALVFLVISCPCALVVSIPLGFFGGIGAASRSGVLIKGGNYLEALNHVKYAVFDKTGTLTKGVFHVTGIYPAEAFTKESLLETAALAEMHSTHPIAASLREAYGNELQTERVQQYSEISGHGIRAQIDGRLVLAGNAKLMEREHIAFNVAQQAGPLDVGTVVHVAVDGTYAGCILISDEVKEDAAKTIASLKKLGVVKTIMLTGDNRTVAEAVGRQLGLDEVRAELLPQHKAEAIEQLSASKKTSDKILFVGDGINDTPVLALADVGVAMGGLGSDAAIEAADIVIMNDEPSRLVTAIHIAQRTRRIVWQNIIFALGVKVVFLSLGAFGIATMWEAVFSDVGVTLLAVLNVMRVLKVGTDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAC6</accession>
    <name>E3EAC6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplC11</name>
        <name evidence="7" type="ORF">PPSC2_21550</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373111.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08745"/>
    <dbReference type="EnsemblBacteria" id="ADO58544">
        <property type="protein sequence ID" value="ADO58544"/>
        <property type="gene ID" value="PPSC2_21550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4581"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="LIFPFES"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="145"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="266"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="78"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33839" checksum="66B0EE2915738ACA" modified="2011-01-11" version="1">MTNKAFNATRSEKLFDLFNYILMALIVVLTLYPFLNVLAISLNNSTDTVRGGIYIWPRQFTLENYKTIFQYDGLLRGLQVSILRTVVGTLLGLICASMLAFTLSRVDFRARKFISTFLALTMYFSGGMVPVFILMRDLHLLGSFWVYIFPGLISAFNVFVIRSFMDGLPYALQESAKLDGANDFTIYWKVILPLCKPVLATIALFLAVNQWNAWFDTYLYNGTAAQWTTLQFELMKILQSTQQGGANMANNNDMAKQMAQISPESIKMAITITVTLPILLVYPFLQKYFVGGMTLGAVKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAC7</accession>
    <name>E3EAC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Protein lplB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">lplB15</name>
        <name evidence="8" type="ORF">PPSC2_21555</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373112.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08750"/>
    <dbReference type="EnsemblBacteria" id="ADO58545">
        <property type="protein sequence ID" value="ADO58545"/>
        <property type="gene ID" value="PPSC2_21555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4582"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="OMA" id="WYIVTAS"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="246"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="303"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="107"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="18"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="337" mass="38444" checksum="D542DFBBB2582AC8" modified="2011-01-11" version="1">MGSSTETASSADTTIPESNRGRPRKARGSKPERGEKGLWNSVKQQKYLYFMSIPFVIWVFVFSYFPLWGWTMAFQNYKPAKSFWDQKWVGLDNFIELFQDERFYLVLRNTLAMSLMGIVFGFVVPIFFAILLNELRGMLFKRVVQTVSYLPHFVSWVVVAGLVTKMLSIDGGIVNDILVALHIVDEPIQFMAKGSWFWYIVTASDIWKETGWNTIIYLAAITGIDQEQYEASRVDGASRWRQMWHITLPGIRSTIAILFIMAIGHLVSNGFEKQFLLGNSLVTDYSEVLDLYALNYGINLGRFSYGTAIGIFNSLVSILLLFTANGIFKKLTKESIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAF3</accession>
    <name>E3EAF3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">metN2</name>
        <name evidence="5" type="ORF">PPSC2_21680</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373138.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08875"/>
    <dbReference type="EnsemblBacteria" id="ADO58571">
        <property type="protein sequence ID" value="ADO58571"/>
        <property type="gene ID" value="PPSC2_21680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4609"/>
    <dbReference type="eggNOG" id="COG1136">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="WENVAVP"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="24450" checksum="D02C902F3917FC84" modified="2011-01-11" version="1">MALLKTQALKKHYGNGDTAVHALDSVNLEVESGEFVAIVGTSGSGKSTLLHMLGGLDRPTSGDVTIDGKDIFTLKDEELTIFRRRKIGFVFQNYNLVPVLNVYENIVLPIELDGKEPDKAHVDKIVHTLGLDHKMNNLPNNLSGGQQQRVAIARALAAKPAIILADEPTGNLDSKTSLDVMGLIKVSSQQFAQTMVMITHNEEIAQMADRIIRIEDGKIVGGATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAL8</accession>
    <name>E3EAL8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase U32</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydcP</name>
        <name evidence="2" type="ORF">PPSC2_22715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373315.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10230"/>
    <dbReference type="EnsemblBacteria" id="ADO58776">
        <property type="protein sequence ID" value="ADO58776"/>
        <property type="gene ID" value="PPSC2_22715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4810"/>
    <dbReference type="eggNOG" id="COG0826">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011540_4_0_9"/>
    <dbReference type="OMA" id="MFHMEHC"/>
    <dbReference type="OrthoDB" id="1264653at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020988">
        <property type="entry name" value="Pept_U32_collagenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001539">
        <property type="entry name" value="Peptidase_U32"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12392">
        <property type="entry name" value="DUF3656"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01136">
        <property type="entry name" value="Peptidase_U32"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3656" evidence="1">
        <location>
            <begin position="403"/>
            <end position="523"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="836" mass="93800" checksum="B1276EB1D1FE74A8" modified="2011-01-11" version="1">MKSAVRREDVELLAPAGDWDCMRAAVANGADAIFFGVEKFNARARANNFRMDELPEIMAFLHSYGVKGFLTFNILVFENELEDAKELVDACIDAGVDALIVQDMGLVKMIRDISPDFPIHGSTQMTITSPEAVEFTKPYNMERVVLGRENNLKQIQKIGDQARLPMEVFVHGALCVSYSGQCLTSEMWGGRSANRGECAQACRLPYDLMVDGEQKPMADVTYLLSPKDLAAIDLMPELIDAGVVSFKIEGRLKTPEYVANVVSKYRKAIDKYFDGDTSKTSKEDIRELQQSFSRGFTHGFLEGTNNKKLVDGTFPKSRGVYLGRVEQILRDGVVCRIDAPLKRGDGIVFDAGDPTQKEEGGRVYDIRRKGVKIEGEAGEGWIVDIVAGRNDVDLRRVHVGDRIWKTNDPALDKRLRQSYETEKPYRVFPVHVRVSGSPGQPLSTWWTDVQKGTTVRVDSELELEIAQKRPMTPELLEEQFGRLGGTVFQLEKLDVHLHGDVIVPMRELNSIRRQAVELLAGERPKPPVYTKRAVEVYGDASAPASSVAHGQAELTALCRSLPQVEAALEAGVEFIYADFEFIKQFPAAVEAVHGAGRRIALVTPRIHMPGENGYHNNILRLQPDAVLVRNPGALYFYMRHRLENPDAHHPQLIGDFSLNIANHKAADLFLDSGCDLVTPSYDLNIQQMVDMLRRTRTDKLEIVIQQHLPMFHTEHCVYCTFMSEGTDYTNCGRPCEDHRASLRDRIGMSHPVRVDEGCRNTVYNAIEQSGAEYLSNFLELGVSRYRVEFLEETPEQVHEVIDLYNRALRGEISGTQVWKTLKATNQLGVTRGQLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT6</accession>
    <name>E3EAT6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yrdR</name>
        <name evidence="4" type="ORF">PPSC2_23750</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59000.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11255"/>
    <dbReference type="EnsemblBacteria" id="ADO59000">
        <property type="protein sequence ID" value="ADO59000"/>
        <property type="gene ID" value="PPSC2_23750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5026"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033863_4_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="71"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="100"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="190"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="228"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="257"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="282"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="7"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="160"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59000.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="36845" checksum="21587D3C2409BF72" modified="2015-05-27" version="2">MNKQIMTGSLLCLIASMSWGAMFPVSHIALQHINPLYFSFLRYLSVTLILIVLLWLKEGRTAFRFEGKGKVLLFFGTMGFTIYNMAVFQGQHAMGAAGTLVASIMEVLMPMISIAMVWVMTRRMPPKYTLISMLIALAGALLVITNGKWTFFTLAGQHLLALLLIFVGVVGWVVYSMGGSHFAGWSTLRYSTLTCLLGTLVSFVVVTFASAFNWITVPDWQHVWSVKYEMSFMILLPGLAALLSWNAGIRKLSPLNGILFINFVPITTLVLMYFQGYTISRYELYGTVLVIFALILNNMFQRSSLRPSNSSRGARFRLNRRKSFNGDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT7</accession>
    <name>E3EAT7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">tlpB3</name>
        <name evidence="11" type="ORF">PPSC2_23755</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59001.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886063.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11260"/>
    <dbReference type="EnsemblBacteria" id="ADO59001">
        <property type="protein sequence ID" value="ADO59001"/>
        <property type="gene ID" value="PPSC2_23755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5027"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="276"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="301"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="9">
        <location>
            <begin position="372"/>
            <end position="643"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59001.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="662" mass="71672" checksum="5FE090E674818E0C" modified="2015-05-27" version="2">MGTRRKRKTIWTLRNKLILGFLLVLLIPSLSISIATYKSSYNAMEKQLYSSANQGVTTANSVIEYAIASKIEDVGYLAERLDGSMIDGPNSPLIQPKLIQYIGLHEDAKDIFVGTPKGLMIRGVPKKDEGTFDPRTRPWYIEAMKQPGKVVITPVIINSSGIPVVIVSRTLSDQSGVIGVSLNLESVRKLASIKVGQEGYIVILDHTKKFVVHPTAKAGSLPQDNSLDRLYTAPSGNFNYMYEGQEKYLTYVTNEDTGWKIAGTFYQSEISDATAAMRYVTIIVLAASLVIALIAIFLITRSVLVPIRKLQKSAERISEGDLTGDLETGKTDEVGELSAHFQTMVDSLRTMIRSVRETTDRVSSSAEELAAGADQTTQAIEHVTIAIQEVAVGSERQLQSVKHGSVSMEGLAQQAADVSERMVGVSEHVKMNAESAQEGSKAATQAVQKMHDIDETVHDLGHAMDSLSERSGEIVNIISVISGIAKQTNLLALNASIEAARAGDHGKGFAVVATEVRKLAEESAKSATLISERIEAMQVDMNHALGAMQQARIRVTEGIDSVTTSEHSFAEISQAVERAMGHIHEITGVTQEMARGTVGVVDIMSDISHISDEAASNTESISAAAEQQLASIEEIASSTADLSQMAEELRELVGRFQIEEKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB03</accession>
    <name>E3EB03_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373816.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12505"/>
    <dbReference type="EnsemblBacteria" id="ADO59283">
        <property type="protein sequence ID" value="ADO59283"/>
        <property type="gene ID" value="PPSC2_25010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5300"/>
    <dbReference type="eggNOG" id="ENOG502ZBXK">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100909_2_0_9"/>
    <dbReference type="OMA" id="NHASISF"/>
    <dbReference type="OrthoDB" id="1918179at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="20853" checksum="B373052C7EC62304" modified="2011-01-11" version="1">MVADQSVFILLTNTGTFLTRVIKSYTRAPYNHASISFNRELSELYSFGRKTPINPLDGGFVKEDIKTGTYSRFPNTTCVIYELQVTDREVEKMKRVLHVFIRSRQKYMYNLLGLIGVALKEPVEFSNSYFCSQFVAEILQRSGIKIWNKLPALITPDDFRQSDRFHLIYEGKLSDYEPQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB52</accession>
    <name>E3EB52_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FAD-linked oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ygaK</name>
        <name evidence="2" type="ORF">PPSC2_25235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373865.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5396"/>
    <dbReference type="EnsemblBacteria" id="ADO59332">
        <property type="protein sequence ID" value="ADO59332"/>
        <property type="gene ID" value="PPSC2_25235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5349"/>
    <dbReference type="eggNOG" id="COG0277">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2509599_0_0_9"/>
    <dbReference type="OrthoDB" id="330793at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012951">
        <property type="entry name" value="BBE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08031">
        <property type="entry name" value="BBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BBE" evidence="1">
        <location>
            <begin position="36"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="10132" checksum="AA43C1806DC79AFE" modified="2011-01-11" version="1">MAQKLQKKSTRLTGRIVLPGNPSYNTARMEFNRGDYVNFPDLQIKNWPKAYYGENFGRLKQVKRKYDPHNVFRFAQSIPVGKQVRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB57</accession>
    <name>E3EB57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373870.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5401"/>
    <dbReference type="EnsemblBacteria" id="ADO59337">
        <property type="protein sequence ID" value="ADO59337"/>
        <property type="gene ID" value="PPSC2_25255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5354"/>
    <dbReference type="eggNOG" id="ENOG5032VU9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1370410_0_0_9"/>
    <dbReference type="OMA" id="FICAISD"/>
    <dbReference type="OrthoDB" id="1451190at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="25028" checksum="E302DC72144351C7" modified="2011-01-11" version="1">MPNDKQQLHKESIKYLTTAPLRENDPKFICAISDVAYEFLTTDEVGLIVQLYFKMKNIALRNKILYGLIRCRHLELKDFFQKAYKKERYLDMRLLAIHGLVQYAPEEEIEKVTDHFLKILIKRPETTPYNYYEYEFLRSAFGFPLLIKKYGYSCFEKVYQQVEKQYQDMPEAFKGHLTFDEDGKQVSLRTPMKIKQMIDRFYESRNLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB99</accession>
    <name>E3EB99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phage-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvqH</name>
        <name evidence="3" type="ORF">PPSC2_20935</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PspA/IM30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373000.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08165"/>
    <dbReference type="EnsemblBacteria" id="ADO58431">
        <property type="protein sequence ID" value="ADO58431"/>
        <property type="gene ID" value="PPSC2_20935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4465"/>
    <dbReference type="eggNOG" id="COG1842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056466_4_2_9"/>
    <dbReference type="OMA" id="YLRQCEQ"/>
    <dbReference type="OrthoDB" id="941029at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007157">
        <property type="entry name" value="PspA_IM30"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31088">
        <property type="entry name" value="PTHR31088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04012">
        <property type="entry name" value="PspA_IM30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="101"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="26341" checksum="A59905BD32467437" modified="2011-01-11" version="1">MSVFRRMRDITVATFNEHLEQSQDPVQLIDQFLYNTRQEIAEAEKLQQQYAVHTRQMKQQLDHALSMQAKREEQALLALKADEEHVAKLALQEKMLYAEKEEQYRELWEQSRESLRELEQQLDTLKTEYQTVHSKRQYYAARVQTLRLQQQMNERAGTYGGRNVPRMFNRLEDRVADMEAETMSLRELRRGEEYTTDAHSGGSLLEQEWARLKSKLNNSGKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBP0</accession>
    <name>E3EBP0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidoglycan-binding protein LysM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">xlyB</name>
        <name evidence="4" type="ORF">PPSC2_23075</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373396.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58858">
        <property type="protein sequence ID" value="ADO58858"/>
        <property type="gene ID" value="PPSC2_23075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4887"/>
    <dbReference type="eggNOG" id="ENOG50303TJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1693749_0_0_9"/>
    <dbReference type="OMA" id="QNKDRFE"/>
    <dbReference type="OrthoDB" id="2067089at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168121" evidence="2">
        <location>
            <begin position="35"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="3">
        <location>
            <begin position="102"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="15742" checksum="60B93D9140229766" modified="2011-01-11" version="1">MKNVMKKVAVSGMLAVSLGAVSLLSPLASGDALAASGQERNKDRAEQLEKIQQQEAAQKAFEAKVFGTETTENATTTTPTQSTTENNNQTTTTKSATTVKTITVNVQEGDTLASIAEKYGVTVEELVKINNLVKVGQELQVPQTNTNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ5</accession>
    <name>E3EBQ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_23145</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373411.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4933"/>
    <dbReference type="EnsemblBacteria" id="ADO58873">
        <property type="protein sequence ID" value="ADO58873"/>
        <property type="gene ID" value="PPSC2_23145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4902"/>
    <dbReference type="eggNOG" id="COG1305">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009282_0_0_9"/>
    <dbReference type="OMA" id="NGSVIRM"/>
    <dbReference type="OrthoDB" id="1293885at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="674"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="702"/>
            <end position="797"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="801" mass="84076" checksum="17DF56506221CBFA" modified="2011-01-11" version="1">MSDKIRQKDKNNISVYIQGGEKKVMTKFNKKMINVLATATLVAGVAAPIAALTAPTAIHAASSYQVLNTPSISGGAQNGIQLGRVHVGIDKASLNSGGSLTVSLPKGFKFSKSFKNVNLKDTVGKSLKNESVSDVTADTYGTTVYVEQNDNGDGKAGHTPVEYNVEKVGSSDNTFKVVFTGSNSADDLDVYFNFNVIDATGPSNGPIKVAFDAAANSGLTSSEVTVGNVVSSGQVGLSAVDTESKTDSFKFRLKVKEQTAGALDTNNNIKLKLPSGFKWSGKGDAAVLFGDLKAGDVSVTGYDNNNDTLTISLKKKTTQQSSFDLPLNFEVDDENSAKTGDVVVNVTGNTTTDVSTLVVGTYGEIGGGVSVAKPTDIIAGHDEQKIGDISIKETVAGSFVGDRTVTLRLPEGARWQSAFEGKTGSNEFVGSREYTNGLSNVDISYSDSDKRTLKLKFNNNGSQNSSDPGTLTLKNVEVATQPGFSGDLNVEVAGSQGLTGNVKVATVKKAVTLAAATKPTLTIGLGDQQIGDITITEAAREALTKSKNSNGQVILELPTGVRFASTPEVKVTSGDVKIKSVSTDTYGDTNKGRLSFYVDSESATPSTITISAPKLVVDRTVAQGDIVAKLKGEAASYTAYEGNSDVTRNWRDNNTAADEVAIATVGTPAPGATSTKAVFTLGSTSYTVNGQTKTADVAAYAENGRTYLPVRYAAEALGVSPQNILFDKATSTVTLIKGDRVAQIKLNTNLLTVNGSVIRMDVKAVTNKNRTVLPIFWVSRALDASINYDATAKTVTVENNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX5</accession>
    <name>E3EBX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">malG</name>
        <name evidence="7" type="ORF">PPSC2_24190</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373634.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11715"/>
    <dbReference type="EnsemblBacteria" id="ADO59099">
        <property type="protein sequence ID" value="ADO59099"/>
        <property type="gene ID" value="PPSC2_24190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5122"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_2_9"/>
    <dbReference type="OMA" id="YIPFLYM"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="144"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="244"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="73"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="30582" checksum="1975945071F57BBF" modified="2011-01-11" version="1">MYKLKRLLANSIKYAALLLGAFIALLPIVVILFASLKTKAEYTASSPLTPPVNWLNWANYAKAFVDGNMLTGFLNTAFILLISIIGATLTGSMIAYILNRFKFKGKSLMLGAFLLATLIPGVTTQVSTFQIINKLELFNTPWAAILLYLGTDIIAVYIFLQFLDSIAVALDESAMLDGASYLTIYWRIILPLLKPAIVTVIIIKGVNIYNDFYTPFLYMPKTSLQVISTALFKFKGPYGSQWEVISAGIIIAIIPTLVAFLSLQKYIYNGFAQGSVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBY8</accession>
    <name>E3EBY8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pyridine nucleotide-disulfide oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ndh3</name>
        <name evidence="3" type="ORF">PPSC2_24250</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373647.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11770"/>
    <dbReference type="EnsemblBacteria" id="ADO59112">
        <property type="protein sequence ID" value="ADO59112"/>
        <property type="gene ID" value="PPSC2_24250"/>
    </dbReference>
    <dbReference type="GeneID" id="66575216"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5135"/>
    <dbReference type="eggNOG" id="COG1252">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021377_7_2_9"/>
    <dbReference type="OMA" id="KWILVEA"/>
    <dbReference type="OrthoDB" id="403436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003954">
        <property type="term" value="F:NADH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006116">
        <property type="term" value="P:NADH oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="PTHR43706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="2">
        <location>
            <begin position="4"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="393" mass="41584" checksum="12E77B98B502F88F" modified="2011-01-11" version="1">MSKQILILGGGYGGLLAALTARQHMDASQATITVVNRFASHQIITELHRLAAGTIAEKAVALPLEKLLRNKDIILKVDTVSEIKPDDKKVTLASGATLSYDALVISLGSETAYFGIPGLQEHSFTLKSVAEANRIRAHVEARLDAYKQSGNKADATIVIGGGGLTGVELVGEYADKLPAVCREKGINYEDINLYCVEAGPSILAGFPQPLVDRAVTSLEKRGVQIVAGVPITEMKADEVLLKDGRSIKTNTLIWTGGVQGNALVGASGIEVNRGRATVNGALQSTSHEDIFLAGDSAVVFPGEGERPYPPTAQLAWQMGELVGYNIFAYFNGAKMERFTPVFSGTLGSLGRTDAIGTVGANGTQLKGAVATLMKEGSNIRYLSHIKGLFALAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC30</accession>
    <name>E3EC30_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppC9</name>
        <name evidence="7" type="ORF">PPSC2_25410</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12905"/>
    <dbReference type="EnsemblBacteria" id="ADO59370">
        <property type="protein sequence ID" value="ADO59370"/>
        <property type="gene ID" value="PPSC2_25410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5385"/>
    <dbReference type="eggNOG" id="COG1173">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028518_1_2_9"/>
    <dbReference type="OMA" id="QADWMTL"/>
    <dbReference type="OrthoDB" id="1734230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="166"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="216"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="274"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="96"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="33862" checksum="5DFE388720BD0D0F" modified="2011-01-11" version="1">MSAETVTIETNQKAAIRPEASPWRIAIRRFNQNRLALAGLVILILMVIICVFGPMISPYHLDDYKLSDKNLSPNAKYWLGTDKFGRDILLRTMLAGRISLTVGLVATFISVMIGATLGALAGFYRKGVDTVIMRIADIFMALPTLPLLIILGAVLSDLKVDPSNRIYFLMLIIGILSWTSLSRLVRGQILTLREQEFMQATEALGLRDRRKIFRHLLPNTIPTIIVTATLGVAGAIITESALSYLGIGVVPPTPSWGNMISAANNLIDFRKRPWIWVPPGMCILITVVAINLIGDGLRDALDPKMKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECR4</accession>
    <name>E3ECR4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YqiK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqiK</name>
        <name evidence="2" type="ORF">PPSC2_01825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368998.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14590"/>
    <dbReference type="EnsemblBacteria" id="ADO54358">
        <property type="protein sequence ID" value="ADO54358"/>
        <property type="gene ID" value="PPSC2_01825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.367"/>
    <dbReference type="eggNOG" id="COG0584">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030006_3_5_9"/>
    <dbReference type="OMA" id="YRMFECD"/>
    <dbReference type="OrthoDB" id="1542724at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008081">
        <property type="term" value="F:phosphoric diester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="SSF51695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GP-PDE" evidence="1">
        <location>
            <begin position="7"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="27448" checksum="16A4C88B6C5222BA" modified="2011-01-11" version="1">MTMTQKVINFAHRGASGVCPENTMAAFRHALELGATGIETDVQRTQDGHLVLIHDESLERTTGCPLDVRDITLEELNKLDAGSWFDEKFRGERVPMLGELLELAQSSDTIINLELKNSIHLYPGMEEEVIAAVKRFGLEKRVILSSFNHESLALCAQIAPEIKTGALYIEIMVRPSEYATQFGATALHAYKQVVTPEAVSEALALGVVYHPWTVNEPEEMERLLEAGVNGIITDYPDRLAHILAVHSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECZ3</accession>
    <name>E3ECZ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carboxylesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-1006</name>
        <name evidence="2" type="ORF">PPSC2_04345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369496.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17155"/>
    <dbReference type="EnsemblBacteria" id="ADO54862">
        <property type="protein sequence ID" value="ADO54862"/>
        <property type="gene ID" value="PPSC2_04345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.866"/>
    <dbReference type="eggNOG" id="COG0400">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049413_6_1_9"/>
    <dbReference type="OMA" id="NDPICSP"/>
    <dbReference type="OrthoDB" id="1195966at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003140">
        <property type="entry name" value="PLipase/COase/thioEstase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02230">
        <property type="entry name" value="Abhydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Abhydrolase_2" evidence="1">
        <location>
            <begin position="75"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="22012" checksum="F2E5B658BC7F26A7" modified="2011-01-11" version="1">MKHVFRKGNDPQAPVILLLHGTGGNEQDLLPLADMVAPGASVLGVRGNVLENGMPRFFRRLAEGVFDIEDLVFRTKELSEFVDSAAEQYDFDRNNVVALGYSNGANIAASMLFHDAKALRGAILHHAMVPLRGLQLPDLNGVPVFLSSGENDPIVPAAESQELQALLEGAGAQVEAYLERNGHQLTRTEAEAAGQWFGKHFNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED37</accession>
    <name>E3ED37_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phenolic acid decarboxylase</fullName>
            <shortName evidence="1">PAD</shortName>
            <ecNumber evidence="1">4.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yclC</name>
        <name evidence="2" type="ORF">PPSC2_02135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>prenyl-FMN</name>
            <dbReference type="ChEBI" id="CHEBI:87746"/>
        </cofactor>
        <text evidence="1">Binds 1 prenylated FMN (prenyl-FMN) per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the UbiD family. YclC subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54394.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885860.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14900"/>
    <dbReference type="EnsemblBacteria" id="ADO54394">
        <property type="protein sequence ID" value="ADO54394"/>
        <property type="gene ID" value="PPSC2_02135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.403"/>
    <dbReference type="eggNOG" id="COG0043">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023348_3_2_9"/>
    <dbReference type="OMA" id="TEGGCCW"/>
    <dbReference type="OrthoDB" id="1012819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019439">
        <property type="term" value="P:aromatic compound catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009636">
        <property type="term" value="P:response to toxic substance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01985">
        <property type="entry name" value="UbiD_YclC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032902">
        <property type="entry name" value="BsdC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002830">
        <property type="entry name" value="UbiD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30108">
        <property type="entry name" value="PTHR30108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01977">
        <property type="entry name" value="UbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00148">
        <property type="entry name" value="TIGR00148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0058">Aromatic hydrocarbons catabolism</keyword>
    <keyword evidence="1" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="1" id="KW-0216">Detoxification</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="1" id="KW-0288">FMN</keyword>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0464">Manganese</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Prenyl-FMN binding" evidence="1">
        <location>
            <begin position="160"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Prenyl-FMN binding" evidence="1">
        <location>
            <begin position="181"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="160"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54394.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="52857" checksum="DEE07AF0352A167A" modified="2015-05-27" version="2">MAYKDFRDFLHTLEKEGQLLTISDEVKPEPDLAAANRALNNLGDKTPALFFNNIYGYTDARIAMNVMGSWPNHALMMRMPKNTPLKEQFFEFARRYEQFPVPVKREDAAPFHEVEITENINLFDILPLFRLNQGDGGFYLDKAILISRDLDDPDTYGKQNVGLYRMQVKGKNRLGIQPVPQHDIAIHIRQAEERGENLKVAIALGCEPVITTAASTPLLYDQSEYEMAGAIQGEPYRVVKAKDADLDLPWGAEVILEGEVLAGEREYEGPFGEFTGHYSGGRAMPVIQINRVYHRKQPIFEHLYIGMPWTETDYMIGVNTSVPLFQQLKDAFPNEIVAVNAMYTHGLVAIISTKTRYGGFAKAVGIRALTTPHGLGYCKLVIVVDEEVDPFNLPQVMWALSTKLHPKHDAVIVPGLSILPLDPGSDPAGMTHKMILDATTPVAPDIRGHYSQPLDSPLGVAEWEKKLSQMLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED95</accession>
    <name>E3ED95_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methionine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">metI</name>
        <name evidence="7" type="ORF">PPSC2_02400</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369092.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15170"/>
    <dbReference type="EnsemblBacteria" id="ADO54452">
        <property type="protein sequence ID" value="ADO54452"/>
        <property type="gene ID" value="PPSC2_02400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.462"/>
    <dbReference type="eggNOG" id="COG2011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077375_0_1_9"/>
    <dbReference type="OMA" id="LFPHLKW"/>
    <dbReference type="OrthoDB" id="1464674at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="56"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="191"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="17"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="23586" checksum="5EF8BC23A2F21980" modified="2011-01-11" version="1">MMITGTTITWDQLWEALYESVLMVSISLFIGALIGIPIGILLVVTRLGGILENKWLYGILNPIINIVRSLPFIILLIAIIPLTRLIVHTSIGTSAAIVPLIIYIAPYIGRLVENSLLEVNPGILEAADAMGATPFQVIRYFLLPEAFSSLILSLTTAAIGLIGATAMAGAVGGGGIGDLAIAYGYQRFDTLVMLITVIILVVFVQGVQSLGNLLSRKARRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDH7</accession>
    <name>E3EDH7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_04770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369589.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0974"/>
    <dbReference type="EnsemblBacteria" id="ADO54956">
        <property type="protein sequence ID" value="ADO54956"/>
        <property type="gene ID" value="PPSC2_04770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.959"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_11_7_9"/>
    <dbReference type="OMA" id="KFYRYIV"/>
    <dbReference type="OrthoDB" id="1823496at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="164" mass="18806" checksum="428AB3E4F83072EE" modified="2011-01-11" version="1">MVNSILLKEYATEYQSQVVDLILHIQQKEYNIAITKADQPDLLDIENFYQHGNGNFWVALRGGSVVGTVALLDIGSHKTALRKMFVKRNYRGKTFNVSNQLLQHAIEWAKDRSVEGIYLGTTPQFVAAHRFYEKNGFVSIALDELPMGFPVMKVDKKFYKYTIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDI7</accession>
    <name>E3EDI7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Rhamnogalacturonate lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_04820</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54966.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17715"/>
    <dbReference type="CAZy" id="PL11">
        <property type="family name" value="Polysaccharide Lyase Family 11"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54966">
        <property type="protein sequence ID" value="ADO54966"/>
        <property type="gene ID" value="PPSC2_04820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.969"/>
    <dbReference type="eggNOG" id="COG3401">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002616_2_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd10318">
        <property type="entry name" value="RGL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028994">
        <property type="entry name" value="Integrin_alpha_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041624">
        <property type="entry name" value="RGI_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034641">
        <property type="entry name" value="RGL11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43118">
        <property type="entry name" value="PTHR43118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18370">
        <property type="entry name" value="RGI_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69318">
        <property type="entry name" value="SSF69318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169123" evidence="1">
        <location>
            <begin position="31"/>
            <end position="621"/>
        </location>
    </feature>
    <feature type="domain" description="RGI_lyase" evidence="2">
        <location>
            <begin position="34"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54966.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="621" mass="67531" checksum="DBE796CC0854BB9F" modified="2015-05-27" version="2">MDKRFRHAVLLCLGVMLCGVVTPMDSPISAASTRQMEKLNRGTVAVKVPEGVLVSWRLLGTEADSVGFNLYRGASKVNDAPITSRTNFLDKAGTTSSSYTVRAVVNGAEQAASPAVKAWNSNYLDVPIQQPAGGTTPDHVNYTYNANDASVGDLDGDGEYEIVLKWDPSNSKDNSQSGYTGNVFLDGYELDGTRKWRIDLGRNIRAGAHYTQFLVYDFDGDGKAEVVCKTADGTVDGIGVKIGDASADHRNTSGYILKGPEFLTVFSGDTGKALSTIDYVPPRGTVSSWGDNYGNRVDRFLAGVAYLDGVRPSIVMARGYYTRTVLVAYDWRNGNLSRRWTFDSNSSTNAGTAGQGNHSLSVADVDGDDKDEIVYGSLVVDDNGAKLANTGMGHGDALHVGDLDPDRSGYEVFKVNEDKNATYGAAMYDPRNGNILWGVKTGKDTGRGMSADIDPRTKGNEQWAPGVGLRSAQGQLITNTTPSSINFGIWWDGDLLRELLDHTSSSAGKIDKWNYTNSTTSNLLTATGTSSNNGTKGTPSLQADLFGDWREEVIWRKSDNSALRIYTTPYESEHRFYTLMHDPVYRLSVAWQNVAYNQPPHTGFYLGEGMSKPQQPNIYTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDL4</accession>
    <name>E3EDL4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Manganese ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">troB</name>
        <name evidence="5" type="ORF">PPSC2_06465</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369953.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19430"/>
    <dbReference type="EnsemblBacteria" id="ADO55322">
        <property type="protein sequence ID" value="ADO55322"/>
        <property type="gene ID" value="PPSC2_06465"/>
    </dbReference>
    <dbReference type="GeneID" id="66573646"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1332"/>
    <dbReference type="eggNOG" id="COG1121">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
    <dbReference type="OMA" id="IAVLHDF"/>
    <dbReference type="OrthoDB" id="1721927at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="27888" checksum="5D53BA5AAD60BAB0" modified="2011-01-11" version="1">MGHSPLVVRDLSVAYQKKPVLFDVSFEVPEGKLIGIIGPNGAGKSTLIKAVLGLIPKLRGEVLVYGKPYKQQLLKVGYVPQRESVDWDFPTNALDVVMMGRYGRLGWFKRPGAADRQAAMESLDKVGMSKFADRQISQLSGGQQQRVFLARALAQDAQLYFMDEPFVGVDAATEKAIISLLNDLKQQGKTVLVVHHDLSTVTDYFDQVMLLNGHLMAFGETADIFTEGNLQRTYGGRLSILKTGSESGTILGVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDN3</accession>
    <name>E3EDN3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Transketolase</fullName>
            <ecNumber evidence="4 10">2.2.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">tktA</name>
        <name evidence="12" type="ORF">PPSC2_06555</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate = aldehydo-D-ribose 5-phosphate + D-xylulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:10508"/>
            <dbReference type="ChEBI" id="CHEBI:57483"/>
            <dbReference type="ChEBI" id="CHEBI:57737"/>
            <dbReference type="ChEBI" id="CHEBI:58273"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="2.2.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <text evidence="10">Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
        <text evidence="10">Binds 1 thiamine pyrophosphate per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the transketolase family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.1" evidence="4 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369972.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19520"/>
    <dbReference type="EnsemblBacteria" id="ADO55341">
        <property type="protein sequence ID" value="ADO55341"/>
        <property type="gene ID" value="PPSC2_06555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1350"/>
    <dbReference type="eggNOG" id="COG0021">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009227_0_0_9"/>
    <dbReference type="OMA" id="HHTEGIE"/>
    <dbReference type="OrthoDB" id="188169at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004802">
        <property type="term" value="F:transketolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02012">
        <property type="entry name" value="TPP_TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005478">
        <property type="entry name" value="Transketolase_bac-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020826">
        <property type="entry name" value="Transketolase_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033247">
        <property type="entry name" value="Transketolase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43522">
        <property type="entry name" value="PTHR43522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00232">
        <property type="entry name" value="tktlase_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00801">
        <property type="entry name" value="TRANSKETOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00802">
        <property type="entry name" value="TRANSKETOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0106">Calcium</keyword>
    <keyword evidence="8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 10" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="11">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="681" mass="73952" checksum="ADA34C83B0E499DF" modified="2011-01-11" version="1">MTDQNQAIQKDENSTIDNLSITTIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNPDRPTWVNRDRFVLSAGHGSMLLYSLLHLSGYDLPMEELKQFRQWGSLTPGHPEFGHTAGVDATTGPLGQGLAMSVGMAMAEAQLGATYNKDEFKVVDHFTYAICGDGDLMEGISHEAASLAGRLQLGKLIVLFDSNDITLDGKLNLSSSESVAKRFEAYNWQVLRVEDGNDLPAIQKAIEEAQADSTRPTLIEVKTVIGYGSPNKQGKGGHGGTHGSPLGAEEAKLTKEFYKWVYEEDFHVPQEVREHFAKVKERGIAANKAWDEQFAKYKAAHPDLAAQFETAVNGDLPEGWDRDLPKYSTEDKAVSTRVASGNALNGLAPNVPFLTGGSADLESSTMTHLNNLTNFTPEDYAGRNIYFGIREFGMAAAMNGMALHQGVKVFGGTFFVFTDYLRPAVRLAALMGLPVTYVLTHDSIAVGEDGPTHEPIEQLASLRIIPNLTVIRPADGNETSAAWAYTLENKKNPVALVLTRQNLPILAATAEHAREGIKRGAYVVADAADGKPVAQILATGSEVQLAVKAQEALAEQGIQVRVISFPSWDLFEKQDKAYKDSVLLPEVKARLAVEMAYPLGWEKYVGDQGDILGISTFGASAPGDRVIKEYGFTVENVVSRVKALLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDQ2</accession>
    <name>E3EDQ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fepC</name>
        <name evidence="5" type="ORF">PPSC2_06645</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369991.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19610"/>
    <dbReference type="EnsemblBacteria" id="ADO55360">
        <property type="protein sequence ID" value="ADO55360"/>
        <property type="gene ID" value="PPSC2_06645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1368"/>
    <dbReference type="eggNOG" id="COG1120">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
    <dbReference type="OMA" id="VEFGRYP"/>
    <dbReference type="OrthoDB" id="1752365at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="15"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="47"/>
            <end position="54"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="30899" checksum="1B097CC39F2113FB" modified="2011-01-11" version="1">MTKQSELQKVYDRALEVAGLTRAYGKFHVLKNISWNVDEGAWWGIIGPNGSGKSTLLHLLSGVDQPTSGSVHIYGKKVGSYSRKELSQLVAVLQQEGIPPVGYTVREVIEMGRFPHQDWLGREKGVDVEAITDRVLARLSLTSLADRTLDRLSGGQRQRVALAKVMVQEPQVLLLDEPTTYLDLRYQLEFMELLAEWRQETGVTIIAVLHDLNLAAQFCDNLLVLKDGMVEGLGTSSDLLTEDRIRRVYGVEPVMLPHPDSGVPQLLLRRSAASTADQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDW8</accession>
    <name>E3EDW8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yabM</name>
        <name evidence="8" type="ORF">PPSC2_00225</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368682.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13240"/>
    <dbReference type="EnsemblBacteria" id="ADO54034">
        <property type="protein sequence ID" value="ADO54034"/>
        <property type="gene ID" value="PPSC2_00225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.44"/>
    <dbReference type="eggNOG" id="COG2244">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022017_2_1_9"/>
    <dbReference type="OMA" id="GQETRMP"/>
    <dbReference type="OrthoDB" id="749401at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13124">
        <property type="entry name" value="MATE_SpoVB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024923">
        <property type="entry name" value="PG_synth_SpoVB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029303">
        <property type="entry name" value="Polysacc_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002797">
        <property type="entry name" value="Polysacc_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01943">
        <property type="entry name" value="Polysacc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14667">
        <property type="entry name" value="Polysacc_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038958">
        <property type="entry name" value="PG_synth_SpoVB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="94"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="124"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="164"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="248"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="300"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="341"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="376"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="404"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="428"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="467"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="501"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="domain" description="Polysacc_synt_C" evidence="7">
        <location>
            <begin position="373"/>
            <end position="525"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="552" mass="57214" checksum="AD1DD76AF80223E4" modified="2011-01-11" version="1">MQENRAASRLLRGAVILTLAAVASKLIGTLQKIPLQNIGGDGVFGIYNTVYPFYTLFITIAAAGFPAAVSKFVAEYEAVGNQAAGQRVARLSSLVLGIFGLILGLLMYTCAPLIGQWIDNAHVIPSVRAAAIAFLFVPVMAGLRGYFQGLQNMIPTAVSQVTEQAIRVSVMIILLLFMLSQGAGADMIAAGAVFGSAAGGAAGLVIMLLYWRGHRKRLRRQETVMTTVQAQTGELHPAESSGALLKALLRYALPVCLGALAVPLINLVDTFTVPRLLKQEGLDDTAVMVAFGVYNRGLPLVQLVMMFATTLSALFIPSLAEARVTGGTELARRQCEQSLRWFWLLGLAAATGLIVLAVPVNVMLYADDTGSTVMRWMALTAVGGTLSIISAALLQGLGAVRAPALAMLAAAAAKGLLNWLLVPQLGTAGAAIAGAVAYLLAAVINIALLARLVGLRGSWSASVLKPAALLVALAGAAGAAMWGTSAVLGALGWAAGGRATAAAESLLGVAAGAVVFVIGLARLRLITEAELVAVPKLGRPLAAVLRRLRVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE01</accession>
    <name>E3EE01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD(P)H nitroreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yodC</name>
        <name evidence="2" type="ORF">PPSC2_02630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369121.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15395"/>
    <dbReference type="EnsemblBacteria" id="ADO54481">
        <property type="protein sequence ID" value="ADO54481"/>
        <property type="gene ID" value="PPSC2_02630"/>
    </dbReference>
    <dbReference type="GeneID" id="66574457"/>
    <dbReference type="KEGG" id="ppm:PPSC2_02630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.490"/>
    <dbReference type="eggNOG" id="COG0778">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070764_4_5_9"/>
    <dbReference type="OMA" id="HLQNWRF"/>
    <dbReference type="OrthoDB" id="1847197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="13"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="22428" checksum="D12BEAE35A363302" modified="2011-01-11" version="1">MSSSRKNETLSVISERHAVKSYVKDFKMPEEDLEAILTAAVEAPSAWNLQHWKFLVIESEADKQKLLPIAYNQGQVAESSVTIAVLGDLEANRNAVIYDQAVEAGALPAEIRDALVGQINGAYQNPQVARDAAILNSALAAQNIMLAAKSLGYDTCAMGGFIPAQLIEQFNIPARYLPTMLISVGKAQVPARPSGRFPLSDVVVKGSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE68</accession>
    <name>E3EE68_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PELOTA_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_04940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369624.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17835"/>
    <dbReference type="EnsemblBacteria" id="ADO54991">
        <property type="protein sequence ID" value="ADO54991"/>
        <property type="gene ID" value="PPSC2_04940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.995"/>
    <dbReference type="eggNOG" id="COG1358">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032640_1_0_9"/>
    <dbReference type="OMA" id="WTGKGVI"/>
    <dbReference type="OrthoDB" id="1130053at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028157">
        <property type="entry name" value="PELOTA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011215">
        <property type="entry name" value="PRTase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15608">
        <property type="entry name" value="PELOTA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11202">
        <property type="entry name" value="PRTase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF020979">
        <property type="entry name" value="UCP020979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PELOTA_1" evidence="1">
        <location>
            <begin position="297"/>
            <end position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF15608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="42368" checksum="F54034F9D7B7E579" modified="2011-01-11" version="1">MKQALMEQIQQKNIHPPVPLGSYPASDVTFLLKDLSRVALEKGTEDREEAIQSGVHYSEMLPVEYQPTAEYIGLFHETLAQSAQKVALAAASVAEMIVRKRGLNTAIVSLARAGTPIGILIKRYIDWKYGVSLPHYSISIIRGKGIDRNAILYILQQHGLGIELQFVDGWTGKGAIRQVLIEACREMNADYGLRLNDDLAVLADPGSCSETFGTREDYLIPSACLNSTVSGLMSRTVLRDDLIGADDFHGAKFYESWRSVDQSNTFVDTVSGYFQSVAETAAAYAEQMTLNPPVVTWQGLRDIEAIQQAFGIRDINLVKPGVGETTRVLLRRVPWKILIDREDNPNLQHIMLLAKDRGVPVEVFEGLTYSCCGIIKPLKGGQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE73</accession>
    <name>E3EE73_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_04965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369629.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1014"/>
    <dbReference type="EnsemblBacteria" id="ADO54996">
        <property type="protein sequence ID" value="ADO54996"/>
        <property type="gene ID" value="PPSC2_04965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1001"/>
    <dbReference type="eggNOG" id="ENOG5030GGI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1480658_0_0_9"/>
    <dbReference type="OMA" id="INIVYQY"/>
    <dbReference type="OrthoDB" id="1314965at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="21746" checksum="45B4A24BE61E7090" modified="2011-01-11" version="1">MLEFSFEIIDESKINIVYQYGSSSFNFNLFFNYGVWTLHPFDGILLQNKEMCRLIVTDLFKNKDFHVMLARENILLSTLRTSIDLNPETRGERYQEQEFDELSEFAETHSFEDVLQIEQDSVRERIDFFQNIIQRMYMEGFGPEDNDFNKVQAILRIYKAAHDQLGELSDFPLSGDERRRRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EED2</accession>
    <name>E3EED2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370014.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19715"/>
    <dbReference type="EnsemblBacteria" id="ADO55383">
        <property type="protein sequence ID" value="ADO55383"/>
        <property type="gene ID" value="PPSC2_06750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1390"/>
    <dbReference type="eggNOG" id="ENOG5032YMX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_986388_0_0_9"/>
    <dbReference type="OMA" id="NICGIFE"/>
    <dbReference type="OrthoDB" id="966604at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="282" mass="32198" checksum="451F83BC63789898" modified="2011-01-11" version="1">MLALSDPVWTLLQGPYGSSQYVPEMLKQLQAGYDGEIADTLYWEELYHQNTLYTCTFAAVPYLVDIALKSSDIGIRADIYNICGIFEAKNSNPLHTKIPLEFARDQVEVDSSLAEYIYAQYRSAIVRLAELTEEMVLYAKEHEEDVGKRYVLAAAAAFEGYHCVAYMLQTYDTGDEYMLDCPHCGTPLYIWPDEQGDTLVVYDKDPVSSGDLIPYPIRPRSLDHRGANIQWLHEYAQKIDEKLLLAQLPYLNGWVECPVCNSPIYIWDELMKMADGVRRYTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEH6</accession>
    <name>E3EEH6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ykuC3</name>
        <name evidence="9" type="ORF">PPSC2_06960</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55427.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599564.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19940"/>
    <dbReference type="EnsemblBacteria" id="ADO55427">
        <property type="protein sequence ID" value="ADO55427"/>
        <property type="gene ID" value="PPSC2_06960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1434"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034180_0_0_9"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="83"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="162"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="228"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="266"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="297"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="321"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="355"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="382"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="1"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55427.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="423" mass="47068" checksum="AA1B8EA9225752C2" modified="2015-05-27" version="2">MTGLKQILRNKNYVRFFLATFASQMGGIIGVTAFMFYLLKRFTNQPYYATLAELMYSLPMLVVFLVVGVLADRMDRQKIAVNCDWISAFLSLCLLVFIWIDSIPLVFALLFIRSAASKFFFPAESAIIQGILSEDDYTIAAGLNQMMGSLFMLFGGTLGAVVYWHFGITGAILIDAISFIVSALLIRSCKIPEEVRLPNGAHQFKQLKFKLVMIDFKQGFLYILRNRLLLWLVSGFFMFGILNGGFSVLPMFILKYKLAPGNYEQYMVWTGIIFGAGVLLGTLIASLISAKLKLHQMIAAGVLVAGIGMCILGFVNHLYAFMIINFVIALILPFINIGIGGWLPRIVDPQMMGRVQGLINPLMMLSQSLTLGFIAVSFPSFISIELLFLLVGVCTVMVGIYYTIVLPRYADYSTSSKALQESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEM0</accession>
    <name>E3EEM0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YheC2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yheC2</name>
        <name evidence="1" type="ORF">PPSC2_08195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55708.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599605.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20800"/>
    <dbReference type="EnsemblBacteria" id="ADO55708">
        <property type="protein sequence ID" value="ADO55708"/>
        <property type="gene ID" value="PPSC2_08195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1723"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_0_1_9"/>
    <dbReference type="OrthoDB" id="1230237at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55708.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="459" mass="50858" checksum="C33CC5FB18EAF096" modified="2015-05-27" version="2">MSIKKTTIQIIGSGILQDDVLMVGESLLRKWKISAGHPVQLAFGSFRQEVTVISVPRYSGLRVGSVLARKMGLHASHDSCNLRVTYSRGRRTLRVGPLISVLVSRDYPEQPDKPFGSITLFCRELVGECRRQGAYVYFFTPEHIGSQPGRVQGWVYDGGWKKTVMPAGDVVNNRLTSRKLENRTSVQHFMKEVKSQYGTAFFNEKFLDKNEVFDALKSNSSLRKYLPESHLLQTFAVFKKMCNQYPSVFLKPVRGSLGKGIMRINKQTDGTFSVLSTTAGTPRKQSYANVDKLYKSLAGKMKSTRFQLQQGLTLIDHDKRPVDFRALVQKNASGTWTVTSIVARIAGGSHFVSNLARGGTLSTVKEALAKTTLPATVKSNGLTSLKTAALDIASGVEKAIPAHFAEFGIDLAIDSTGRIWLLEVNSKPSKNDNTPLNDQKTRPSVKKMIEYCCYSAGFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP1</accession>
    <name>E3EEP1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ytvI1</name>
        <name evidence="7" type="ORF">PPSC2_08295</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370348.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1754"/>
    <dbReference type="EnsemblBacteria" id="ADO55728">
        <property type="protein sequence ID" value="ADO55728"/>
        <property type="gene ID" value="PPSC2_08295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1743"/>
    <dbReference type="eggNOG" id="COG0628">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031275_4_0_9"/>
    <dbReference type="OMA" id="EIAYVYQ"/>
    <dbReference type="OrthoDB" id="944044at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014227">
        <property type="entry name" value="YtvI-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02872">
        <property type="entry name" value="spore_ytvI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="171"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="229"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="254"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="288"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="328"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="372" mass="41543" checksum="E52917962A822F61" modified="2011-01-11" version="1">MSRLILNRILRALWVVIVIVALLLGIYVLFPLVYPFLFAWLVAYAMNPLVVFLHNKARMPRWAAVTVSLFVYLGGIAIILSAAITRMVREVIKLAMTFDGHIERFKSLFIDWTQSDLIQNIIIEINHFIRDNPDYQHTINSNIDKTTQTVSSAVTTLVGQFFNGVLNLLTSLPNMGAVLMVIVLSAFFISKDWDRHYRILSNTVPDTIRKPLSDIWHDLRKALYGYLRAQFIIISITALTVIIGLFILRVESAFTIGLMIGLVDLLPYLGVGIVMIPWILYAYMSGNLALGVGLSILYAILLIGRQIVEPKVLASSVGLNPLPTLIGMFIGLKLFGALGLIIGPVSLIVLDALNRANVIQDLRNYILAGRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EER3</accession>
    <name>E3EER3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_08395</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370369.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21000"/>
    <dbReference type="EnsemblBacteria" id="ADO55750">
        <property type="protein sequence ID" value="ADO55750"/>
        <property type="gene ID" value="PPSC2_08395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1763"/>
    <dbReference type="eggNOG" id="COG1073">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046683_0_0_9"/>
    <dbReference type="OMA" id="VSPAVNW"/>
    <dbReference type="OrthoDB" id="721431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="Hydrolase_4" evidence="2">
        <location>
            <begin position="60"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="37805" checksum="73D0030FE254EB4E" modified="2011-01-11" version="1">MNKTYRLTLGIVAGLVVALILIVLYQNSYKMTEEKIQIATPKGVLTGTLALPKNYSGKIGLVVFVHGDGPINDTYDDGYKPLWERFASKGYASLSLNKPGINGAPGNWLEQSMEDRAQEIRYAVDWAKTLPMIDKHKIGLWGASQAGWVIPKIVKEEHDIAFSILVSPAVNWITQGQFNTRKELEQEGASPQQIKKRLDYDQKILQLLKKHASYEKYLSMADPENIIPKERWSFIGKNFRSDSTEELSYLKSPVLLVLAGKDMNVDVKDTERVYRQKISPELLSVIHLPEVDHSMMNEQIAHSKSLTFLTAIFAPRQLVNSEYLKILADYVSQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEW5</accession>
    <name>E3EEW5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rsuA1</name>
        <name evidence="5" type="ORF">PPSC2_00510</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RsuA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368734.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13515"/>
    <dbReference type="EnsemblBacteria" id="ADO54088">
        <property type="protein sequence ID" value="ADO54088"/>
        <property type="gene ID" value="PPSC2_00510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.99"/>
    <dbReference type="eggNOG" id="COG1187">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024979_1_2_9"/>
    <dbReference type="OMA" id="NAHDKEY"/>
    <dbReference type="OrthoDB" id="1037615at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120159">
        <property type="term" value="F:rRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042092">
        <property type="entry name" value="PsdUridine_s_RsuA/RluB/E/F_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000748">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB/E/F"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018496">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020094">
        <property type="entry name" value="TruA/RsuA/RluB/E/F_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00093">
        <property type="entry name" value="TIGR00093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01149">
        <property type="entry name" value="PSI_RSU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="4">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26223" checksum="E62D6B4F54AC86C4" modified="2011-01-11" version="1">MRINKFISETGFCSRREADKLVESGRVTINGEVAVLGSQAEEGDDVRVNGKPLRDKSDHVYIALNKPVGITSTTESHIRGNIVDFVGHPQRIFPIGRLDKDSEGLILLTNDGDIVNKILRAEGKHEKEYIVTVDRPVTPSFVQGMSSGVKILGHRTLPCEVTRVSEYVFRIILTEGKNRQIRRMCAAFGYEVKKLQRLRIMNIRLGSLQKGAWRDLTEAEKQELGQMLDYTLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF31</accession>
    <name>E3EF31_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">helZ</name>
        <name evidence="3" type="ORF">PPSC2_02945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369190.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15760"/>
    <dbReference type="EnsemblBacteria" id="ADO54551">
        <property type="protein sequence ID" value="ADO54551"/>
        <property type="gene ID" value="PPSC2_02945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.560"/>
    <dbReference type="eggNOG" id="COG0553">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000315_21_8_9"/>
    <dbReference type="OMA" id="FHIDRWW"/>
    <dbReference type="OrthoDB" id="325071at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140658">
        <property type="term" value="F:ATP-dependent chromatin remodeler activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022138">
        <property type="entry name" value="Helicase_SWF/SNF-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12419">
        <property type="entry name" value="DUF3670"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="579"/>
            <end position="742"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="868"/>
            <end position="1024"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1041" mass="116169" checksum="2BB87ADE38C7BA9E" modified="2011-01-11" version="1">MNQPLYGIWLGDVFFCFSGETSEPRIDAWSSVIRRLTLKGDLRPFRQAALRLAEVRIPNNARVETAGRGGKRRSMLGRTLEGLALEPRETMALLTRMDEKGCAASGITLGEEMQYWQKAAYFALELMQRGEIVPSLTEARPSGPRRRGPDAAVGVWIPRLREEEDIRRFHELAAAMPAVCMAAPAVFAGKEPETREDAAGMVLYSFLCAVVHAETTAVLAASDRELGRYRADYRRGGSPLAELWWNSLLTGSRQVAIQGTPAEMEELVLQASSLKGSTMPITEREAKEPVEGQLRLCLRLEPSLEESIQEWRITFWAESDAEPGLRLPALALWAYPERDLVRGEIVYRQVQAQLLTRLGQAAEAAPILQEALNRPYPEGLTLEPEMFFRFLTEAVPSLQKNGITVQMPSRWSREGRRRAGLRLKMRSTEQGAKPDGVIADTSSVGINRMISFDAEAVLGDTTLTMEELESIVAANLPYVRLGGEWIEVDPKEIRQVLRFIKRGENGEMSLSEWMHLAAENESAGEASWKGLSIFGAESAGLLASLAEGGVLRSVEPRPVPETLHGALRPYQERGFQWLAAMRGLGFGVCLADDMGLGKTIQVITCLLDGGIGADDQRPALIICPTSLLGNWQRELKRFSPDLSLYIHHGNQRLHGELFQENVREYDIVLTTYHLAGRDGSDLSAVYWSSIVLDEAQYIKNARTKQAQSVMKLSAPHRIAMTGTPVENRLSELWSIFQFLNPGYLGTASSFRQRYSLAGEERGSALRELHRLVSPFMLRRLKSDPDIRKDLPEKLELKSYCVLTPEQAGLYRGVVDQLLGTLDGQVGMARKGLVLSSLTKLKQICDHPGLIIPGRADSSKTENSGKMERLLELVETIRENNESALIFTQYVSMGELLVSRLAKILGEEPYFLHGGLAKTRRDEMVHNFQQGKGPNIFVLSLRAGGVGLNLTRASHVIHYDRWWNPAVENQATDRVFRIGQSRNVQVHKLICQGTLEERIDELIESKKALSEQVVGSGEHWLTEMSDDELRGLIALQNDVWIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF32</accession>
    <name>E3EF32_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoribosylglycinamide synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-706</name>
        <name evidence="1" type="ORF">PPSC2_02950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54552.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599433.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15765"/>
    <dbReference type="EnsemblBacteria" id="ADO54552">
        <property type="protein sequence ID" value="ADO54552"/>
        <property type="gene ID" value="PPSC2_02950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.561"/>
    <dbReference type="eggNOG" id="ENOG5030PHY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_101767_0_0_9"/>
    <dbReference type="OrthoDB" id="1367206at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54552.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="241" mass="26206" checksum="1D8436F6E275B4CE" modified="2015-05-27" version="2">MTRPQVKLKVTDGRWIVELDGNGPEGKSTGVPFAHPVQWTGPVPVLNLEQRGAWLEQLKAEPLDIYRLLKGEACLSLDEIVQLAAETAISSRENGVGAVEDVKKALQTGLENEPQHCPALIGMTQEELLEYVFSAWAGELSHMQRTSPALEPTSRAEGGRSGTAAISEWIAESAAEGALHRPGAGFHAIEIRLPQKLASKKETDITSLLPGLPRAEEALKLIRERVAERAQAAIPQKRHNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF54</accession>
    <name>E3EF54_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Alpha-galactosidase</fullName>
            <ecNumber evidence="3 6">3.2.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">melA1</name>
        <name evidence="11" type="ORF">PPSC2_03045</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids.</text>
            <dbReference type="EC" id="3.2.1.22"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 36 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.22" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369213.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15860"/>
    <dbReference type="CAZy" id="GH36">
        <property type="family name" value="Glycoside Hydrolase Family 36"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54574">
        <property type="protein sequence ID" value="ADO54574"/>
        <property type="gene ID" value="PPSC2_03045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.582"/>
    <dbReference type="eggNOG" id="COG3345">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009640_2_1_9"/>
    <dbReference type="OMA" id="DCPNHTV"/>
    <dbReference type="OrthoDB" id="131906at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052692">
        <property type="term" value="F:raffinose alpha-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016052">
        <property type="term" value="P:carbohydrate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14791">
        <property type="entry name" value="GH36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038417">
        <property type="entry name" value="Alpga-gal_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000111">
        <property type="entry name" value="Glyco_hydro_27/36_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002252">
        <property type="entry name" value="Glyco_hydro_36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031705">
        <property type="entry name" value="Glyco_hydro_36_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031704">
        <property type="entry name" value="Glyco_hydro_36_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16874">
        <property type="entry name" value="Glyco_hydro_36C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16875">
        <property type="entry name" value="Glyco_hydro_36N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005536">
        <property type="entry name" value="Agal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00743">
        <property type="entry name" value="GLHYDRLASE36"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00512">
        <property type="entry name" value="ALPHA_GALACTOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_36N" evidence="10">
        <location>
            <begin position="28"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_36C" evidence="9">
        <location>
            <begin position="639"/>
            <end position="718"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="356"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="466"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="468"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="538"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="433"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="516"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="538"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR005536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR005536-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR005536-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF16875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="727" mass="82601" checksum="FD94D6BED227B676" modified="2011-01-11" version="1">MAIIVQEQPGLFHLQSSGMSYIIQIVDGFPVHVYWGDRLKHREPMADLLLHTPTTAGLDRLPQEYPQYGSGDFRTPAYQVELEDGTRITELKYDGYRIIKGKPSLPGLPAVYTENEAEADTLELELKDAFSGLKVVLLYTVFADRNVIARSARLSNEGEQSLRLLRALSASVDFSGKSDLEFMYLSGAWAREGNITRKPILQGETRIDSKRGMSSHQLNPFTALVTQETTERHGEAFGFSLVYSGGFEAGAELDSFGSTRFSIGVNSFDFSWLLSPGESFQTPEAVMVYSGQGLGEMSRTYHRLYRTRLCRGTYRDEERPILVNNWEATYFDFNADKLVSIAKEGAELGIELFVLDDGWFGKRDSDNSSLGDWYEDRRKLPDGLADVAKRINQLGLKFGLWFEPEMISPDSELYRKHPDWCLHVPGRRRSEARWQLVLDYTRKEVRDYIYDSLAAIFSSAPVSYVKWDMNRCLTEIGSAELPPERQSETAHRYVLGLYELLERVTTDFPHILFESCSSGGGRFDPGMLYYMPQVWTSDNTDAVERLKIQYGTSLVYPVSATGAHVSAVPNHQVGRITPLDFRGDVAMSGNFGYELDLTKFTDEEKETVKRQIAVYKQIRGLVQKGDLYRLKSPFEDNESAWMFVSEDQEDAIVYYFQVMAVPNAPWRALRLDGLNPELEYEVQSGNSGQKSIHGGDRLMKLGLPLVYRQKDYESGWFRLRALRSNKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF63</accession>
    <name>E3EF63_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-733</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-733</name>
        <name evidence="1" type="ORF">PPSC2_03085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369222.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0599"/>
    <dbReference type="EnsemblBacteria" id="ADO54583">
        <property type="protein sequence ID" value="ADO54583"/>
        <property type="gene ID" value="PPSC2_03085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.590"/>
    <dbReference type="HOGENOM" id="CLU_2466125_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="88" mass="10536" checksum="CB07CBE2BDC95CC9" modified="2011-01-11" version="1">MEQNDINIHQLTDEIYQILHKRMDKLGIAYGIVTEFSYNPEEPTSWTISIENSKIVLTSAILFQYMKQHHNLEDTLTHFMRDHFSYFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFD8</accession>
    <name>E3EFD8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PPSC2_05445</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369734.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18355"/>
    <dbReference type="EnsemblBacteria" id="ADO55101">
        <property type="protein sequence ID" value="ADO55101"/>
        <property type="gene ID" value="PPSC2_05445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1105"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_1_9"/>
    <dbReference type="OMA" id="HIKPHFL"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="6 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="331"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="355"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="94"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="641"/>
            <end position="666"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="100"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="666" mass="75881" checksum="43783156DA0384EE" modified="2011-01-11" version="1">MMPRLRLRNMPLRYQLMVLFLLFGIVPSLGLGLLVNWTVERIIERQVENHTMQLIGKVNEALDTKMENLQNMTYLVAFNPDIGEFWKGRTLADGHAGHTSGATPENQGKQAQQPLLNQAPGSKQAVSSVQEQDTLYEMKQFLQGFTTLYPEIAGILIVNEKGDYISNEMYARSTRSLTEEDWYTQAAQHAGIFTVLGQPSHRNVTTHVRYKDSEIVSVVRSVTDPETGHVLGVIMIDLKLRAVSQAARDVTLGKSGYVMVTDAKGRSVYMPDMPLIERIPPQWFGTEDSGMFTREAGGRELLFMFQASEFTGWRTVGVFPARESTLEVRQIQFYVVCFVFIVCLFGLTASLRLSSSIAQPIFRLMSYMRKAETGDLTVRQWSERGDEIGMLGRSFNRMLEQIRRLMLLSELRERQKRDAELRSLQEHIKPHFLYNTLDTIHWMARKNGADDVSDMVGALSKLFRLGLSKGDDFISLRSEVEHITSYMQIQQTRYRDRLRWELNVPDELKDLFVLKLMLQPVVENAIYHGIKARRGPGTICVEAKAEDGKLLLTVRDDGAGMTAERLCELREWLERPLEAMEGRRKQKEVRTNGRSYGMLNVQARIRLSFGEEYGITLDSKEGTGTCVTITHPLLLDMAQLKKPYDKGEGQDDEIQGNRQRDNGESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFF5</accession>
    <name>E3EFF5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55118.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55118">
        <property type="protein sequence ID" value="ADO55118"/>
        <property type="gene ID" value="PPSC2_05525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1123"/>
    <dbReference type="eggNOG" id="ENOG5032TI4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2396875_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55118.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10860" checksum="BFA285D6809570CA" modified="2015-05-27" version="2">MKNVCNEMPPRDGTGYLDSFHMFGEAQLFQYKDWILLDANAQSNLGIWALIKRVKDDNHLVAYGEWEFHSNIVYCGNLIIPEDELNPFMHVRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFG5</accession>
    <name>E3EFG5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369761.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18485"/>
    <dbReference type="EnsemblBacteria" id="ADO55128">
        <property type="protein sequence ID" value="ADO55128"/>
        <property type="gene ID" value="PPSC2_05580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1134"/>
    <dbReference type="eggNOG" id="COG2013">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1164949_0_0_9"/>
    <dbReference type="OMA" id="HLASQHM"/>
    <dbReference type="OrthoDB" id="1228682at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002838">
        <property type="entry name" value="AIM24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036983">
        <property type="entry name" value="AIM24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016031">
        <property type="entry name" value="Trp_RNA-bd_attenuator-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01987">
        <property type="entry name" value="AIM24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51219">
        <property type="entry name" value="SSF51219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="26465" checksum="E0077B7537DD05B8" modified="2011-01-11" version="1">MDIQAGQHHDESVGSVVTLDLTEGEKLHVLHPQQIIAYRGPSAGRSDKLMNIKGMYRKHKLIQADFTGACRLIAALPPGFSLKMIKLEGSDDLLYDFRNLFWYSAGIQMRTKLLSMKNMLFSRDVIKMKFDGIGYIGILTQGLVCQEQLHPSEPIYVDASSVIAYPENAKLELTVYGNHLASQHMNYHFKMTGHGTVLFHAGEHHRRLQQDMNDDGVIKRLLREIIPFGGVFIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT1</accession>
    <name>E3EFT1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_08645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370422.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55803">
        <property type="protein sequence ID" value="ADO55803"/>
        <property type="gene ID" value="PPSC2_08645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1820"/>
    <dbReference type="HOGENOM" id="CLU_2634776_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168424" evidence="2">
        <location>
            <begin position="26"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="26"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8244" checksum="36D57776A8E76EBB" modified="2011-01-11" version="1">MEIYKKRLLIMAGCIALSITLTSYGESTKENKESDNAGEIISTVESTPVDEAATETESGKATEPVKDEGTTQFLSPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFU9</accession>
    <name>E3EFU9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcD3</name>
        <name evidence="2" type="ORF">PPSC2_08730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370440.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21205"/>
    <dbReference type="EnsemblBacteria" id="ADO55821">
        <property type="protein sequence ID" value="ADO55821"/>
        <property type="gene ID" value="PPSC2_08730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1839"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_1_9"/>
    <dbReference type="OMA" id="IVGCKWS"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="6"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="118" mass="13595" checksum="D3E792C281589082" modified="2011-01-11" version="1">MKQYNLGIEATLEIIGGKWKSLIICLLMAGRKRTSELQRSIPGVSQKVLIQQLRELEKDGIVGRHVYNQMPPKVEYYITEYGITANEIIDLMCTWGRSNIKKRQQQGEDVRLLESESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG47</accession>
    <name>E3EG47_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Flagellar biosynthesis protein FlhA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">flhA</name>
        <name evidence="8" type="ORF">PPSC2_09955</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370691.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22425"/>
    <dbReference type="EnsemblBacteria" id="ADO56080">
        <property type="protein sequence ID" value="ADO56080"/>
        <property type="gene ID" value="PPSC2_09955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2097"/>
    <dbReference type="eggNOG" id="COG1298">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015346_3_0_9"/>
    <dbReference type="OMA" id="MAINPGQ"/>
    <dbReference type="OrthoDB" id="436367at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042194">
        <property type="entry name" value="FHIPEP_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042193">
        <property type="entry name" value="FHIPEP_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042196">
        <property type="entry name" value="FHIPEP_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025505">
        <property type="entry name" value="FHIPEP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006301">
        <property type="entry name" value="FlhA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001712">
        <property type="entry name" value="T3SS_FHIPEP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30161">
        <property type="entry name" value="PTHR30161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00771">
        <property type="entry name" value="FHIPEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005419">
        <property type="entry name" value="FlhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00949">
        <property type="entry name" value="TYPE3IMAPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01398">
        <property type="entry name" value="FlhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00994">
        <property type="entry name" value="FHIPEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="7" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="3 7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="230"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="270"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="677" mass="74342" checksum="C0D332E146F9A580" modified="2011-01-11" version="1">MKIKDITVLAGVIGIVLMMILPIPSWLLDVLLVINISIALMILLVSMNTKEALQFSIFPSLLLITTLFRLALNISTTKLILGEGHAGEVVATFGSWIAGGQIAVGFVVFLILVVVQFIVITKGSERVAEVGARFTLDAMPGKQMSIDADLNAGLINEQQARERRSKIEREADFYGAMDGASKFVKGDAIASIIILIINLVGGFIIGMAVQGKGFQEALSTYSVLTIGDGLVSQIPALLISTASGLIVTRATSDGNLAEDLTGQLFSYPKLIYIVAATIALLGLFTPIHIITTLPLAILLFFAARRMQSNMERKQIADEQLEEEQQIEEVRSPESVINLLQVDPIEFEFGYGLIPLADTQQGGDLLDRIIMIRRQCALELGLVVPVIRIRDNIQLKPNEYVIKIKGNTVGGGELLLNHYLAMSPGYDDDSITGIETTEPAFGLPALWIDENTKDVAELSGYTVVDPPSVVATHLTETIKKHAHELLGRQETRSLVDNLKENYPVLVDDLIPSVLAIGDVQKVLAKLLKEKISIRDMVTIFETLADYGTYTKDPDVLTEYVRQALSRQITQQFAQQGETLRVITVGPGLEKKIAESVQQSEQGSYLALDPVSTQTVYQRMMEQINRLIQSGQQPIVLTSPTIRMYLRQVMERTMQDVPVLSYSELEPNVEIQSVGVVNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG74</accession>
    <name>E3EG74_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_10785</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370873.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23180"/>
    <dbReference type="EnsemblBacteria" id="ADO56267">
        <property type="protein sequence ID" value="ADO56267"/>
        <property type="gene ID" value="PPSC2_10785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2284"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_0_9"/>
    <dbReference type="OMA" id="VNFNINR"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="343"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="364"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="524"/>
            <end position="638"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="653" mass="74632" checksum="EC96CC2039815DFD" modified="2011-01-11" version="1">MSGRVRSQMKSLLRRHIWQWLTDTADQLGGCSLQVKLIVAYIGVILIPVVVFSLYTFHQLYENTMHDITVQNQYVLDTELAQIHSNMEIMERTAQLAISDRNVLHYLTEEREISSDELVQFNLNVFPNLQHLLYSNPNIENIRLYTNNPQAHEIWPMIFNESRLPKTSWLTTAQHQQGRIWWDIYKGPKSLLQGQAGQENEAVQYMALLREIQASGGRHAGLVETNMRLELFSPRVFGTPPRDYAWQMFILNAEDSIPNGGKLVSSTDIATASIQPDPIPIPLSHVHHLLQSRVQGQGGAFDFTYGNKPYLGLYRYIEGLDAYLLNIVALDGPLSDLRHKRNAMLLIICILILLMSVISYTLHALILKQLHTLRESMKRVQKEGDFQLTIPVYGRGEVAELALYFRSLLSRINVLIAEAVQKQAAAQEAELQGLKHQIDSHFLYNTLENLKMMAEMERQYPLSDALTSLGSMMRYNLQWSRPCVALRDEIRHIQHYVAIMNIRHDNQIGLDIRLSSMFMELEMLKMSLQPIVENAIKHGWSTLRRPFLITIEAYSKQDIVELRIQDNGVGISEERKNAIMAGLMHSDMDSYEPGMHGGIGLYNVHRRLSMQYGVGYGIKLDSIPGQSTTVTLILPRRHITRGEDYDDQAVDCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGA7</accession>
    <name>E3EGA7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">M1-291</name>
        <name evidence="8" type="ORF">PPSC2_00710</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368780.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13700"/>
    <dbReference type="EnsemblBacteria" id="ADO54135">
        <property type="protein sequence ID" value="ADO54135"/>
        <property type="gene ID" value="PPSC2_00710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.143"/>
    <dbReference type="eggNOG" id="COG1180">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_645348_0_0_9"/>
    <dbReference type="OMA" id="ISFGQGC"/>
    <dbReference type="OrthoDB" id="259346at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034457">
        <property type="entry name" value="Organic_radical-activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352">
        <property type="entry name" value="PTHR30352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="172"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="423" mass="47278" checksum="38B9E3234344CF7A" modified="2011-01-11" version="1">MYLVYADEKGNVYDHASLYGLARSADMIVEIMEDELIPLPEGATLVSLPSTRPVGMNPETGEMVSLPGDVQAVGALLPQGFTRLCLPGYVKTDKDYKLPLFGYSAVVWKDGAFYVTAEQSDSPSKWNPENCDRNQVKLGVQRMTEQYPENRLYQHLSNCALGYECLTSSNTFLNRWEGGVPVSYSCNAGCFGCISEQPDDSGFVSPQTRMNFRPRVEEIVEVMLEHLKTPESIISFGQGCEGEPSTQAKLIIDAIKEVRSVTDMGYININTNAGLNDHIRGIVDAGLDLMRVSTISALDDHYNAYYKPRGYTLANVEKSLRYASEKGVYTSINYLIFPGVTDREEEIEAMIEFAKRTKLKLIQMRNLNIDPESYLELIPPAQGEILGMKQMLEIYREELPDVVIGSYTHVPPQGLARPKFART</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGG0</accession>
    <name>E3EGG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-340</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-340</name>
        <name evidence="1" type="ORF">PPSC2_01020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368831.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0201"/>
    <dbReference type="EnsemblBacteria" id="ADO54188">
        <property type="protein sequence ID" value="ADO54188"/>
        <property type="gene ID" value="PPSC2_01020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.192"/>
    <dbReference type="eggNOG" id="ENOG50337JV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1693751_0_0_9"/>
    <dbReference type="OrthoDB" id="1937306at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="18014" checksum="E4CFEDAD89509D7C" modified="2011-01-11" version="1">MDYELFLLSNVGINSLGEMMERFTTEYANKKASLSCNDEEIVIGSELFSLALEIEDISDIAFVRNHYNLDVNVCIRIQLFGNTFHQGLELLFKIMGRLIRHIDGNLLFLEDGSAQLLRIEDGQLIVNNTLDQYQTKYLTTSLLSLLDRPYIEKELSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGQ0</accession>
    <name>E3EGQ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">5'-nucleotidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sasH</name>
        <name evidence="4" type="ORF">PPSC2_05605</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369767.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18510"/>
    <dbReference type="CAZy" id="CBM50">
        <property type="family name" value="Carbohydrate-Binding Module Family 50"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55134">
        <property type="protein sequence ID" value="ADO55134"/>
        <property type="gene ID" value="PPSC2_05605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1140"/>
    <dbReference type="eggNOG" id="COG0737">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005854_7_3_9"/>
    <dbReference type="OMA" id="WLATINS"/>
    <dbReference type="OrthoDB" id="1884225at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008252">
        <property type="term" value="F:nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006146">
        <property type="entry name" value="5'-Nucleotdase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00785">
        <property type="entry name" value="5_NUCLEOTIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005127786" evidence="1">
        <location>
            <begin position="27"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="3">
        <location>
            <begin position="589"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="522"/>
            <end position="584"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="531"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="570"/>
            <end position="584"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU362119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="635" mass="66936" checksum="14F0AE343C4B4001" modified="2011-01-11" version="1">MNSWKKLSSILTTAVLLLGCLGTAAADPVANAGTAGTGTTPSPVSGKHITILHTNDTHAHVVANDKEMGFAKLAGIIDQYRAANPNTLLLDDGDTVHGTTFATLVNGESIVKVINKLRYDAMVPGNHEFNYGWKHLVELSKEIQFPVLSANIKQTDGTRLFQPYTIKEVDGVKIGIIGLTTPETAYKTNPKNVEGIQFTDPAAEAKAAVDEIRSKVDVVVALGHLGQDASSKDTSLKVVKEVPGIDIFIDGHSHTVLEKGLFGDNGTLIASAGEYTKYLGVVDLWVDGGKVVQKQAKLIDSTQAADVQPNAEIAALITSIQKEQEPILKEVVAQTSVDLEGAREKVRAGETNLGDLLTDAMRDVSGADVALTNGGGIRASIKAGTVTKGDIITVLPFGNQIVTLKVKGSDLQAALENGAASYPEPSGGFPQVSGISFKIDTSAAKGSRVHSILIGGKALDPEATYTLATNDFTAVGGDQYTMFAKYPQAGMFGSLDEALIRYMQKVGSASLQAQAAGRIQEAKADGKTSLPATQAVPSAPTTTPAPLQEIPQSDSIAAAKPAPVKPAPAKSQTSKPQQVSTTAQAANSHVYVVKSGDTLYDISRKHGTTWQQLQQLNKLKNPHRIYPGQKLDLPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGX3</accession>
    <name>E3EGX3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lpg2</name>
        <name evidence="2" type="ORF">PPSC2_05925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369839.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18890"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55207">
        <property type="protein sequence ID" value="ADO55207"/>
        <property type="gene ID" value="PPSC2_05925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1213"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_715303_0_0_9"/>
    <dbReference type="OMA" id="DNTHALI"/>
    <dbReference type="OrthoDB" id="694191at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="202"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="404" mass="46500" checksum="C13B6E94197FC029" modified="2011-01-11" version="1">MIPKILYLRNFASKVNGASYNLQEVGLGKALVRKGYDCDIVYYNDRKETHLEQVYRHAGCTLRIIWLHGFKFLSNSIYRDVLKDSFLAAYDLVITTEYNQIMTYLLSRKCPDKLALYHGPYRDNTHALIRKLYDVMLLPKVTKSLRRTYVKSDLAKRYLENKGFDNVITIGVGLDRSNVERGFNSDDNSGAREENREVANELRRIGDRPVLLYVGVLEERRNIRFMLSTFKRVLQKHPGCLLLMVGNGRKIDTDRYWAYAQQLGLTDRIIHFPRVEQRHLWQIYGAADVMLFPTQYDIFGMVLLESMLFRVPIISSVNGGSVTLIEDGVSGVMLRSFSEEEWAGRIGTLLEDAELRQSLAEKAFLTIERMSWDRIADEIVSQQRIKPMSSNHAMQSTQESGAAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH88</accession>
    <name>E3EH88_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gltC</name>
        <name evidence="3" type="ORF">PPSC2_09005</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55879.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886096.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21470"/>
    <dbReference type="EnsemblBacteria" id="ADO55879">
        <property type="protein sequence ID" value="ADO55879"/>
        <property type="gene ID" value="PPSC2_09005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1897"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55879.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="34766" checksum="56EA1E65B3017E4A" modified="2015-05-27" version="2">MELRQLQYFMKVAQKEHVTQAAEELHVAQSAVSRQIHQLEEELGVNLFMQKGRNLQLTPVGQLFCKRVETIIKDLERAVLEVHEFLDPEGGEIRIGFPHSLGIHLIPTVVAEFRKRYPNVKFRFKQGMYPSLIRDVLAGEVDLAFVSPFPDRHDHVEGDVVLTEELFAVLPPNHPLASAEHITLSQLKGEKFILFRDGYSLRPIVWQACLEAGFTPDIAFEGEETDTIRGLVAAGMGVSLLPEMALFQTNPLQPARVSIVDPEVTRTIGLIHRRDDKLPLVAKSFRTFLLQYFGLHGNAATSNKTAKAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC1</accession>
    <name>E3EHC1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YqzE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yqzE</name>
        <name evidence="1" type="ORF">PPSC2_09155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370529.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21625"/>
    <dbReference type="EnsemblBacteria" id="ADO55912">
        <property type="protein sequence ID" value="ADO55912"/>
        <property type="gene ID" value="PPSC2_09155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1930"/>
    <dbReference type="eggNOG" id="ENOG5033ENU">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_195274_0_0_9"/>
    <dbReference type="OMA" id="WFGMLPL"/>
    <dbReference type="OrthoDB" id="2092665at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025622">
        <property type="entry name" value="YqzE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14038">
        <property type="entry name" value="YqzE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7739" checksum="FBA807AD291A1DB1" modified="2011-01-11" version="1">MAKSDELVTYITQRIVRYMETPREVRRSQKQAKEPWVSKWFGMLPLALKMWIKSTRRGRREQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHI9</accession>
    <name>E3EHI9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase</fullName>
            <ecNumber evidence="6">2.7.8.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">Phosphatidylglycerophosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="primary">pgsA</name>
        <name evidence="19" type="ORF">PPSC2_10235</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">This protein catalyzes the committed step to the synthesis of the acidic phospholipids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a CDP-1,2-diacyl-sn-glycerol + sn-glycerol 3-phosphate = 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycero-3'-phosphate) + CMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12593"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:60110"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="2.7.8.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Lipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Phospholipid metabolism; phosphatidylglycerol biosynthesis; phosphatidylglycerol from CDP-diacylglycerol: step 1/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="17">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.5" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370751.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22705"/>
    <dbReference type="EnsemblBacteria" id="ADO56142">
        <property type="protein sequence ID" value="ADO56142"/>
        <property type="gene ID" value="PPSC2_10235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2157"/>
    <dbReference type="eggNOG" id="COG0558">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051314_2_3_9"/>
    <dbReference type="OMA" id="WSMVYYL"/>
    <dbReference type="OrthoDB" id="1702107at2"/>
    <dbReference type="UniPathway" id="UPA00011"/>
    <dbReference type="UniPathway" id="UPA00084">
        <property type="reaction ID" value="UER00503"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008444">
        <property type="term" value="F:CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006655">
        <property type="term" value="P:phosphatidylglycerol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000462">
        <property type="entry name" value="CDP-OH_P_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004570">
        <property type="entry name" value="Phosphatidylglycerol_P_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01066">
        <property type="entry name" value="CDP-OH_P_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000847">
        <property type="entry name" value="Phos_ph_gly_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00560">
        <property type="entry name" value="pgsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00379">
        <property type="entry name" value="CDP_ALCOHOL_P_TRANSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="12" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="13 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="15" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 17 19" id="KW-0808">Transferase</keyword>
    <keyword evidence="10 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 18" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="140"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="166"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00014944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00033018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU003750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ADO56142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="21342" checksum="A25FA6B7FA76F83E" modified="2011-01-11" version="1">MNLPNRITITRICLIPVMMLALLVDFDFYPPPIEIGAFTLPYNQLIAAIIFLVAASTDGLDGYLARKNNMVTNLGKLLDPLADKLLVTAILVSLVEMGKIDSWVVVVIVSREFAVTGLRQIALLDGSVVAASNWGKLKTIIQIIAIVALLINNFPFVFLGIPFDLIAIWAAVLITIYSGIDYFVKNIHLLSSSKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHK5</accession>
    <name>E3EHK5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Nicotinate phosphoribosyltransferase</fullName>
            <ecNumber evidence="4 8">6.3.4.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">pncB</name>
        <name evidence="12" type="ORF">PPSC2_10310</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>5-phospho-alpha-D-ribose 1-diphosphate + ATP + H2O + nicotinate = ADP + diphosphate + nicotinate beta-D-ribonucleotide + phosphate</text>
            <dbReference type="Rhea" id="RHEA:36163"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32544"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57502"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.21"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate D-ribonucleotide from nicotinate: step 1/1.</text>
    </comment>
    <comment type="PTM">
        <text evidence="8">Transiently phosphorylated on a His residue during the reaction cycle. Phosphorylation strongly increases the affinity for substrates and increases the rate of nicotinate D-ribonucleotide production. Dephosphorylation regenerates the low-affinity form of the enzyme, leading to product release.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the NAPRTase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.21" evidence="4 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370765.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22780"/>
    <dbReference type="EnsemblBacteria" id="ADO56158">
        <property type="protein sequence ID" value="ADO56158"/>
        <property type="gene ID" value="PPSC2_10310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2172"/>
    <dbReference type="eggNOG" id="COG1488">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025154_2_1_9"/>
    <dbReference type="OMA" id="LNFMNYQ"/>
    <dbReference type="OrthoDB" id="241792at2"/>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00457"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004516">
        <property type="term" value="F:nicotinate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004514">
        <property type="term" value="F:nicotinate-nucleotide diphosphorylase (carboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041525">
        <property type="entry name" value="N/Namide_PRibTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041619">
        <property type="entry name" value="NAPRTase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040727">
        <property type="entry name" value="NAPRTase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007229">
        <property type="entry name" value="Nic_PRibTrfase-Fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006405">
        <property type="entry name" value="Nic_PRibTrfase_pncB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036068">
        <property type="entry name" value="Nicotinate_pribotase-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11098">
        <property type="entry name" value="PTHR11098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04095">
        <property type="entry name" value="NAPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17956">
        <property type="entry name" value="NAPRTase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17767">
        <property type="entry name" value="NAPRTase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000484">
        <property type="entry name" value="NAPRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51690">
        <property type="entry name" value="SSF51690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01513">
        <property type="entry name" value="NAPRTase_put"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7 8" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NAPRTase_N" evidence="10">
        <location>
            <begin position="8"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="NAPRTase" evidence="9">
        <location>
            <begin position="154"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="domain" description="NAPRTase_C" evidence="11">
        <location>
            <begin position="360"/>
            <end position="471"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004952"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF17767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF17956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="487" mass="55577" checksum="3639CCB871B54DC2" modified="2011-01-11" version="1">MKSTSLALHTDKYQINMMYAHWVNGSHQRKAVFEAYFRKLPFGNGYAVFAGLERIVNYISNLRFAEEDIRYLSEQEEKYDPMFMEALRQFKFSGTVHSMKEGALVFPNEPLVRVEGTIMETQLVETALLNFMNYQTLIATKASRIKQVASDDTLLEFGTRRAQEADAAIWGARAAYVAGFDATSNMLAGEHFGIPTKGTHAHSWVQTFMTEQEAFDVYAKVLPDQVTLLVDTFDTLESGVPHAIRTAKMLESQGKRMNAIRLDSGDLAYLSIQAREMLDAEGLDYVQIVASNDLDENTIFNLKAQGARIDVWGVGTQLITASDQPSLGGVYKLVEREVDGEMLPTIKISGNPEKVSTPGKKDVYRIVDKKKGRAVADYISFPDEERPRNGKRLKLFNPLHPYMKKYVENYEAVPMLEPIFVNGQKVYELPELDEIRAYHASQLKLFWPEYLRKLNPEIYRVNLSEKVWELKQKLIDSYMQPEVEEKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHS9</accession>
    <name>E3EHS9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RTX toxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yeeJ</name>
        <name evidence="4" type="ORF">PPSC2_11115</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56341.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599705.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2369"/>
    <dbReference type="EnsemblBacteria" id="ADO56341">
        <property type="protein sequence ID" value="ADO56341"/>
        <property type="gene ID" value="PPSC2_11115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2357"/>
    <dbReference type="eggNOG" id="COG1520">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5295">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_253399_0_0_9"/>
    <dbReference type="OrthoDB" id="325753at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003343">
        <property type="entry name" value="Big_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006644">
        <property type="entry name" value="Cadg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00635">
        <property type="entry name" value="BID_2"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00736">
        <property type="entry name" value="CADG"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169252" evidence="2">
        <location>
            <begin position="30"/>
            <end position="1529"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="41"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="102"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="491"/>
            <end position="517"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56341.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1529" mass="161409" checksum="EFCB53C2379A29B4" modified="2015-05-27" version="2">MSSKPNKWLITLALAALVAPTALQTIASAASDASNGVALASLPFKDINNITSEQKTSILQAIEAGLLHGDPSGSYRPTDLLTRQEMAVLLTQALQLSISKVSSSSFSDVDAKSWSSPYIEAVHRAGLMNGDDGSKFRPKAVVTREEAAVLLMRAAGLPITADATESAKLTDWNRVSPWARPYVNTALQSGSMKTVQSGFKPKSSVQRQDIAQYMMSTFFPKDHVVQLQKVEDGKAWINGIEYKLSDSVKGILQTSNQEILKGADIQFVASQRTIESITKLVIHASGQAPIGQASEFSGNLVLDGHNSSIDGDLSIDGDYISVMNLNVKNSFTVTSSLAHDFYASKFTVQGKTYIQGGDQNTVLFDTSGLQDVEVSKQDVHVVIQGSSTVDQMTLTSNATLENDSSSSIQQLNVLTGAQQVELQGTIQQLSVNSDQPVALTGQASINTLVVSSSSSVSLEVAGTISNLQVNNSEANIIVSSSSQVTNTSFAPGVSSSTVSGVTTTSSSSSSGSSRSTVVTNTAPKLVTKYDDQAVTVGDSELQIDLLGHFTDEEQSELKYTAVSSSTKISTVRVEGTKLFIKAVGKGTATITIAADDQSGKKAGTNFKVRVNESPVSLGIPDQSEQLGSGDVILSLGSFFTDSENDLMTYEVAIDDPSIATFTLMGDQLVLTPAVVGHAQVTVKASDGRGGSANQSFQLVVSAGPNQNPVVNQKPGNQTLTVGDADYILDLSPVFLDSNSNPLTISAESSDPSIATVSVNGNQTTVHAVSSGTASIQLKAANGLGGEVKTNFDITVNDITVNEPPASMGIPDQTKQINSGDIQLSLNDFFTDHEKDSLSYSIDISDSSVATAVLNGDTLSITPLKIGSTSVSVKASDGHGGSTSRSFQMEVTAVPNQNPVIDQQPGNQTLILGNSDYTLDLSSVFHDPDGDSVDVSAESSDSLVAAISVNGNIATVHAVSPGTATITLKAEDGRGGEVATNFDVSVNESPISTGIPDQMKEINTGDIQLSLNDFFSSPDNDVLTYDVHSVSEPTVVTAAVYGDMLTLTPLMIGSTLVSIKATDGRGGEVIETFKTTVTAGPPQNQNPVETKPADQSLTVGDAVYSLDLDSVFTDPDGDTLTFKATSFVPSVASAEITGDQLKIQALSAGTTSIEIKATDGRGGETSTTFQVNVQSSGSSNPSSNQRPQVEAAIYEQVLTAGVTNARSYDLSQLFSDADGDALTFTSTVESSGVANAEVNGSTLTLTPGNQAGSTKVTITADDGHGGTATYNFQVTNAPLTTNGIVQIRTKQGVKDPITYDMSTVFPGETSFKVYSGTADSTFTGPIPLNGTVWTWNGDISQYYWVIGANGSATVFQVIANPQGPEDLFFSQYLSLDKTRTAIELFYNPVGDTSKPIENAGYSLEIHQYNLATNTPKVWSQPINSFWKGMPYIYIDSIFYDFFDIVPAAYYNEEIMLSESDKNVTTGYVLKKNGVTIDVLGDPDGKTQFMPNNGTIIRKSGIKSGSSSYNLPGEWNSYPNGTLQYFGHHTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHT6</accession>
    <name>E3EHT6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fecE</name>
        <name evidence="5" type="ORF">PPSC2_11160</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370953.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23555"/>
    <dbReference type="EnsemblBacteria" id="ADO56348">
        <property type="protein sequence ID" value="ADO56348"/>
        <property type="gene ID" value="PPSC2_11160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2363"/>
    <dbReference type="eggNOG" id="COG1120">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
    <dbReference type="OMA" id="EVINPEM"/>
    <dbReference type="OrthoDB" id="1752365at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="3"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="30431" checksum="FED59EF8924DB1C3" modified="2011-01-11" version="1">MNIEVECVTFSIHDKRLIDGISLKVRTGELVGLIGPNGSGKSTLLKNMYRVLRPDSGLVTLDGQDLLRMKYKETARQMAVVSQDAPQTFDFSVRDIVLMGRHPHKKLLEADTVFDHELVEQALERVGMNAQADQGFATLSGGEKQRVLIARALAGQAKFLILDEPTNHLDIRYQLQILDLVKTLQITALAALHDLNLAACYCDRLYVLKEGKVVASGITENVLQPDLLRSVFGVETEIRIHPKTGKPSITFLPDSLRGGAIHDIRNGDPMKSVKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ6</accession>
    <name>E3EHZ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YyaL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yyaL</name>
        <name evidence="2" type="ORF">PPSC2_11825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371093.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24150"/>
    <dbReference type="EnsemblBacteria" id="ADO56488">
        <property type="protein sequence ID" value="ADO56488"/>
        <property type="gene ID" value="PPSC2_11825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2504"/>
    <dbReference type="eggNOG" id="COG1331">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014051_4_1_9"/>
    <dbReference type="OMA" id="PFYFGTY"/>
    <dbReference type="OrthoDB" id="854580at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd02955">
        <property type="entry name" value="SSP411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004879">
        <property type="entry name" value="DUF255"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024705">
        <property type="entry name" value="Ssp411"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42899">
        <property type="entry name" value="PTHR42899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03190">
        <property type="entry name" value="Thioredox_DsbH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006402">
        <property type="entry name" value="UCP006402_thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredox_DsbH" evidence="1">
        <location>
            <begin position="8"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="691" mass="79206" checksum="493B51BD87E5A263" modified="2011-01-11" version="1">MSTSSKPNRLAKEKSPYLLQHAYNPVNWFPWSDEAFEIAKRDNKPIFLSIGYSTCHWCHVMERESFEDQEVAEVLNQDYVSIKVDREERPDVDHIYMSICETMTGHGGWPLTIMMTPDQKPFFAGTYLPKEQKFGRVGLLELLGKVGIRWKEQPDELMELSEQVLTEHERQDLLAGYRGELDDQCLNKAFHEYSHTFDHEYGGFGEAPKFPSPHNLSFLLRYAQHTGNQQALEMVEKTLDAMSRGGIYDHVGMGFSRYSVDEKWLVPHFEKMLYDNALLAITYTEAWQVTGKRLYRQITEQIFTYIARDMTDAGGAFYSAEDADSEGEEGRFYVWSDSEIKAVLGDEDASFFNDLYGITPYGNFEGHNIPNLIDINLEAYGNKHDLTEPELEQRVSELKDKLFTAREQRVHPQKDDKILTSWNGLMIAALAKAGQAFGDTRYTEQARKAETFLWNHLRREDGRLLARYRDGQAAYLGYVDDYAFYVWGLIELYQATFDVQYLQRALTLNQNMIDLFWDEERDGLFFTGSDSEQLISRPKEIYDGAIPSGNSIAAHNFVRLARLTGETRLEDYAAKQFKAFGGMVAHYPSGHSALLSALLYATGKTSEIVIVGQRNDPQTAQFVQEVQAGFRPNMVVIFKDKGQPEIAEIAPYIHDYDLVDGKPAVYVCEHFACQAPVTHIDDLKHMLNRIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI56</accession>
    <name>E3EI56_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YxeD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yxeD</name>
        <name evidence="3" type="ORF">PPSC2_03730</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369360.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54724">
        <property type="protein sequence ID" value="ADO54724"/>
        <property type="gene ID" value="PPSC2_03730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.734"/>
    <dbReference type="eggNOG" id="ENOG50336Y2">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1667670_0_0_9"/>
    <dbReference type="OMA" id="QGTAMYQ"/>
    <dbReference type="OrthoDB" id="1966774at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="139"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="36"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17830" checksum="61DE2DF43504FD3A" modified="2011-01-11" version="1">MFNNMAPQQQIHQCEQIIQQLVQQTQQGTAMYQQLLQQEQQNASSLESLMQRERNAAQMIQTAIQDHQKAMQQYQQVIQLCSQLENTIRSSNQMTQPGFGDNYASRSMQPSAFSTGSHMNHNFPQHMGTTGQHFAGSSNMQQFGNSSQQGMRTAPSGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI65</accession>
    <name>E3EI65_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Levansucrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sacB</name>
        <name evidence="4" type="ORF">PPSC2_03770</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glycosyl hydrolase 68 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369369.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16585"/>
    <dbReference type="CAZy" id="GH68">
        <property type="family name" value="Glycoside Hydrolase Family 68"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54733">
        <property type="protein sequence ID" value="ADO54733"/>
        <property type="gene ID" value="PPSC2_03770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.743"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_557703_0_0_9"/>
    <dbReference type="OMA" id="DPWFFED"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050053">
        <property type="term" value="F:levansucrase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009758">
        <property type="term" value="P:carbohydrate utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08997">
        <property type="entry name" value="GH68"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003469">
        <property type="entry name" value="Glyco_hydro_68"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02435">
        <property type="entry name" value="Glyco_hydro_68"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168939" evidence="3">
        <location>
            <begin position="30"/>
            <end position="499"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="499" mass="55161" checksum="0413C2C3FE5A718E" modified="2011-01-11" version="1">MKFNKWFSKAATATVATTLLLGGGVQAFAKGNDEADSKADSAFTQITRSDMLNIFKQQGKEKYEVPSFDASTIKNIPSAIGHDSSGKQIDLDVWDSWPLQNADGTVANYKGYNIVFGLAGDPKRGEDTFIYLFYQKAGDTSLSGWKNAGRVFKDNDKLLSNDPILKNQSEEWSGSATLTSDGQVRLFYTSRQPYDPNNKLYGKQTLSTAQINVSQPDDKTLKVDGVEDLKSIYDGGDGKTYQNVQQSVGIDMDNHTLRDPHYVEDQGHKYIIFEANTGTETGYQGEDSIQNPAYYGGNKNFFEEEQQNLLQSPKKKGAELANGALGIVELNDDYTLKNVMPPLIASNLVTDEIERANVFKMNGLWYLFTSTRGSKVTVDAIGDDDIYMLGYVSTSLTGPYKPLNGTGLVLHQDLDRDDITWTYAHFAIPQGKGNNVVVSSYMTNRGLFPDHKSTFAPSFLLNIKGSKTSVVKNGILEQGQITIDPANDKKENQNEYGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIL0</accession>
    <name>E3EIL0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CdiI_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370275.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55648">
        <property type="protein sequence ID" value="ADO55648"/>
        <property type="gene ID" value="PPSC2_07915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1657"/>
    <dbReference type="HOGENOM" id="CLU_2383403_0_0_9"/>
    <dbReference type="OMA" id="KYFLECY"/>
    <dbReference type="OrthoDB" id="2170699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041129">
        <property type="entry name" value="CdiI_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18593">
        <property type="entry name" value="CdiI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CdiI_2" evidence="1">
        <location>
            <begin position="18"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="12690" checksum="39873630CDDBE1E2" modified="2011-01-11" version="1">MKKNASLKHKYMEQEVSYENLKYFIESYFNWSMDFADLENLIEEFKSRELPAYVEGLTQEIEVINELKNWDNVQEFVYLYGQRNLNIKKIECIIELLLTKLHGDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIN1</accession>
    <name>E3EIN1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fe-S cluster assembly protein SufB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yurU1</name>
        <name evidence="3" type="ORF">PPSC2_08000</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0051 (ycf24) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370294.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20695"/>
    <dbReference type="EnsemblBacteria" id="ADO55669">
        <property type="protein sequence ID" value="ADO55669"/>
        <property type="gene ID" value="PPSC2_08000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1682"/>
    <dbReference type="eggNOG" id="COG0719">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026231_0_1_9"/>
    <dbReference type="OMA" id="YYSAPKQ"/>
    <dbReference type="OrthoDB" id="635721at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010231">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000825">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037284">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045595">
        <property type="entry name" value="SufBD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01458">
        <property type="entry name" value="SUFBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19295">
        <property type="entry name" value="SufBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101960">
        <property type="entry name" value="SSF101960"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01980">
        <property type="entry name" value="sufB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SufBD_N" evidence="2">
        <location>
            <begin position="45"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="465" mass="52316" checksum="67B6A2124F67C5E9" modified="2011-01-11" version="1">MAKKAPEMEEYKYGFRDEHKSIFQTGKGLTPEIVKEISKIKGEPDWMLEFRLKALKQFEKMPMPKWGGDMDELDFDDIQYYVRPSEKQGKTWEEVPTEIKETFDKLGIPEAEQKFLAGVSAQYESEVVYHSMQKDLEEQGVIFMDTDTALREHPEILKEYFATVVPPADNKFAALNSAVWSGGSFIYVPKGVKCEVPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYSTNSLHSAVVEIICKKNARVRYTTIQNWAPNIYNLVTKRAVAEENATMEWVDGNIGSKLTMKYPAVILKGRGAKGMVLSIAVAGKGQHQDAGAKMIHLAPDTTSTIVSKSISKHGGKVTYRGLASFGRQAQGAKSNIKCDTLILDNQSTSDTIPYNEIMNDDITLEHEATVSKVSEDQLFYLMSRGLTEAEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ94</accession>
    <name>E3EJ94_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CHRD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370986.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23685"/>
    <dbReference type="EnsemblBacteria" id="ADO56381">
        <property type="protein sequence ID" value="ADO56381"/>
        <property type="gene ID" value="PPSC2_11330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2397"/>
    <dbReference type="eggNOG" id="COG2133">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107551_0_1_9"/>
    <dbReference type="OMA" id="CQIREGN"/>
    <dbReference type="OrthoDB" id="1624298at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010895">
        <property type="entry name" value="CHRD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07452">
        <property type="entry name" value="CHRD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00754">
        <property type="entry name" value="CHRD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50933">
        <property type="entry name" value="CHRD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CHRD" evidence="1">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="15625" checksum="56E2DECFFD5A1C32" modified="2011-01-11" version="1">MSNKFRATLRGANEVPPVRTNATGTAEFRYRPASQQLSFELTVRNISRVTEAHIHLGRRGQNGPVVATLFGPSKFGITVRRGVVTGVLRAFDLTGPLRGRTINDLVCQIREGNAYVNVHTIRHPNGAIRGQIRRAPIKRCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ98</accession>
    <name>E3EJ98_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_11350</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370990.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23710"/>
    <dbReference type="EnsemblBacteria" id="ADO56385">
        <property type="protein sequence ID" value="ADO56385"/>
        <property type="gene ID" value="PPSC2_11350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2401"/>
    <dbReference type="eggNOG" id="COG1538">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_751929_0_0_9"/>
    <dbReference type="OMA" id="GTAYEMV"/>
    <dbReference type="OrthoDB" id="567347at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003423">
        <property type="entry name" value="OMP_efflux"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02321">
        <property type="entry name" value="OEP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169282" evidence="3">
        <location>
            <begin position="25"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="308"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="387" mass="43662" checksum="50D0438B5182FB48" modified="2011-01-11" version="1">MKQKAAAVLLVLSFSTGLVTTAQADSSSGSISANVSVNSSAAATAKTSSVTGQALPPLTLKQAVEWAQTNSYNTRTAERDVERRRLELKNAEKELGNSPIDYIDNEYVDNETSWRNYSSSTLSYLASKKQAQYAKDQIYFNVMKSYQSVFVAENQVKNDLEALEIAQAEEKIALAKFARGKLSEYAKNESTQARSQAQQAVEQGKIALQKSRDALNFLMGQPNGTAYEMVDRPVYKEPKKLDIELHIQQLTDMNPNLWKLEDSIKTSELNVRYFDFNNGAGAYDLAKMDVDTAKEELAKGQKDFAESLRNLYATVKENQKKYVQLEESLRTAKEALELSRKKWARGLVIEMELKNNQLKVNQIERQMEELAIELDQNEYTLNKPWST</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJR2</accession>
    <name>E3EJR2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386074.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0269"/>
    <dbReference type="EnsemblBacteria" id="ADO59660">
        <property type="protein sequence ID" value="ADO59660"/>
        <property type="gene ID" value="PPSC2_26820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5669"/>
    <dbReference type="eggNOG" id="COG0861">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070543_1_1_9"/>
    <dbReference type="OMA" id="LIKFWWI"/>
    <dbReference type="OrthoDB" id="1917125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022493">
        <property type="entry name" value="CHP03716_TM_YkoY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005496">
        <property type="entry name" value="Integral_membrane_TerC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03741">
        <property type="entry name" value="TerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03716">
        <property type="entry name" value="R_switched_YkoY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="208"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="30702" checksum="CBC50D159A4E4769" modified="2011-01-11" version="1">MGILHLIGETYAQFFDGNMWIDILTRPANWGLIATLVVMEGLLSADNAIALSLQVRHLPVKQQKKALMYGLWGAYLFRFIAIGLGTALTKLWFIKLIGGSYLLWMMISFFTKMYKDRKQNNIDDEGEESHSSFNKGSFLVRMFGVFWATIISVEMMDIAFSVDSVLAAFGISDLVGILLLGGMLGILMMRGVAQLFTKLLAKVPELEVTAYVLIGFIGLKMLLSTVHEIVALFGITMHEIHITHLQFFIFIALSFAVTFMVNHFKKRKESLTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKA4</accession>
    <name>E3EKA4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Thymidine kinase</fullName>
            <ecNumber evidence="2 9">2.7.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_27905</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="11 12">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
            <plasmid evidence="11 12">pSC2</plasmid>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + thymidine = ADP + dTMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19129"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17748"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.21"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the thymidine kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.21" evidence="2 9"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385845.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0037"/>
    <dbReference type="EnsemblBacteria" id="ADO59431">
        <property type="protein sequence ID" value="ADO59431"/>
        <property type="gene ID" value="PPSC2_27905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5913"/>
    <dbReference type="eggNOG" id="COG1435">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064400_3_0_9"/>
    <dbReference type="OMA" id="ATHSKMT"/>
    <dbReference type="OrthoDB" id="1279539at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004797">
        <property type="term" value="F:thymidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071897">
        <property type="term" value="P:DNA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001267">
        <property type="entry name" value="Thymidine_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020633">
        <property type="entry name" value="Thymidine_kinase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11441">
        <property type="entry name" value="PTHR11441"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00265">
        <property type="entry name" value="TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035805">
        <property type="entry name" value="TK_cell"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00603">
        <property type="entry name" value="TK_CELLULAR_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0237">DNA synthesis</keyword>
    <keyword evidence="6 9 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0614">Plasmid</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR035805-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="200" mass="22888" checksum="7D867EB793FC5187" modified="2011-01-11" version="1">MCENNLGKISVITGPMFSEKSGELIKRILKMERYGGKKVKAYKPTEDFRFEADWIVSRMGYRYPASNIPRKLTDSIIEEILVETESIDVVAFDEVQFFSKPIMGLVDELAYRGKHVICDGLNMDYREKEFGFMGGLLTMADEITNLTSYCSVCQSPHARFTQRMVNGMPAKMGPIILIGDKEDYEVRCRSCYIPPHKVRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKP8</accession>
    <name>E3EKP8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PINc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_27590</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385913.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0105"/>
    <dbReference type="EnsemblBacteria" id="ADO59499">
        <property type="protein sequence ID" value="ADO59499"/>
        <property type="gene ID" value="PPSC2_27590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5844"/>
    <dbReference type="eggNOG" id="COG1875">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022283_2_1_9"/>
    <dbReference type="OMA" id="RGPITEW"/>
    <dbReference type="OrthoDB" id="1749370at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003714">
        <property type="entry name" value="PhoH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002716">
        <property type="entry name" value="PIN_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02562">
        <property type="entry name" value="PhoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13638">
        <property type="entry name" value="PIN_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00670">
        <property type="entry name" value="PINc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PINc" evidence="3">
        <location>
            <begin position="2"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="436" mass="49986" checksum="37D28F36F8272ACD" modified="2011-01-11" version="1">MKLFTLDTSVLIYDVDSLYKFGENEVIIPSIVYEEINHLKDEDSERGFYARKVAELLDELSEEAPLRFGVMLGKTKIRTSYQVHNAEIDKSFFMNKNDYKIIACAKNHNAILITRDRMMRVMARDFVDVEEYNADKVQIKDFYKGYRFMEVSPAEIEKMFDKKLKNNFGLFPNEFLILINNQNPKHTAVGICKKDHVLPVDFSKLDTQGIKLKLTPLNLEQKMLMYLMLDKSITCVTATGKSGKGKSLLAVDYALGAVQSGLYNKFMYTKSTIAVDKKEELGFYPGDLEEKLKPHLQPLYSSIEFLFKKELYGNGKQRRSVDQKVDELILTDLLRFYPLANIRGMSVDEKIVMLDEAQNTTNHMMKSLVTRINDSSKLLVTGDIEQIDDRNLNKFNNGLSHLIEAGKEEEFIGHICMDISSESKRGKLATFGSMKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-12-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKV1</accession>
    <name>E3EKV1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27335</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0159"/>
    <dbReference type="EnsemblBacteria" id="ADO59552">
        <property type="protein sequence ID" value="ADO59552"/>
        <property type="gene ID" value="PPSC2_27335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5785"/>
    <dbReference type="HOGENOM" id="CLU_1804321_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043993">
        <property type="entry name" value="T4SS_pilin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18895">
        <property type="entry name" value="T4SS_pilin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169309" evidence="2">
        <location>
            <begin position="34"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="143" mass="14580" checksum="79223511F24E6AED" modified="2011-01-11" version="1">MVATMNKGFKMTVAIGMLMAMLFVFFSPTLAFAADGESKSSIPGVTISEDGSVTVKGDGFGEKGTSSGFAGIIEKYRGFIAGISGVAALTMIVIFIINFLKLGASVGNPQARSQALTGVLWSGIAAAGLGAVSLIVGLFYNAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL29</accession>
    <name>E3EL29_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phosphoribosyl pyrophosphate synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27160</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386005.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0198"/>
    <dbReference type="EnsemblBacteria" id="ADO59591">
        <property type="protein sequence ID" value="ADO59591"/>
        <property type="gene ID" value="PPSC2_27160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5745"/>
    <dbReference type="eggNOG" id="COG0462">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033546_2_2_9"/>
    <dbReference type="OMA" id="VFDAHSE"/>
    <dbReference type="OrthoDB" id="1011035at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004749">
        <property type="term" value="F:ribose phosphate diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009165">
        <property type="term" value="P:nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005946">
        <property type="entry name" value="Rib-P_diPkinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10210">
        <property type="entry name" value="PTHR10210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14572">
        <property type="entry name" value="Pribosyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="31276" checksum="3A31DF9C00EBA730" modified="2011-01-11" version="1">MILLNGISVHFTTFPNGETKVDGNQILGLLQSVGNHRVELTLKFEDDGDLIKLLFVKEFMDEHDLSASLLITYMPYSRMDRQEGNSVFTLKSVARFINQMNFDSVTIVEPHSDVTPALIDRCRVLYPTLTLLKKVLKQINFDPNKDYIYFPDAGAAKRYGKGKELKGYRQLVGHKSRDFETGRLEKLEIVGDVDRKDYKVLIIDDLCSYGGTFSWGSEKLREKGASVVYLLVTHCEESIYQKGLLDSGLVQKVFTTNTMLNESKHKNLEIIHHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL68</accession>
    <name>E3EL68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59630.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0237"/>
    <dbReference type="EnsemblBacteria" id="ADO59630">
        <property type="protein sequence ID" value="ADO59630"/>
        <property type="gene ID" value="PPSC2_26990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5707"/>
    <dbReference type="HOGENOM" id="CLU_2396878_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59630.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="11170" checksum="B42852CAE82AB002" modified="2015-05-27" version="2">MFAKLLYRISSVNEKGKFNDMNDERSEFLMGLIINFHHYYDHYFDLHGEVFRRMTHTGITSHRGEHKLLLPYKAALAEYPVNRIHDVYSVFYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC01</accession>
    <name>A0A0D5ZC01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040102902.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44305">
        <property type="protein sequence ID" value="AKA44305"/>
        <property type="gene ID" value="PPSC2_20855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4447"/>
    <dbReference type="HOGENOM" id="CLU_2881681_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7422" checksum="72FD7422DB051347" modified="2015-05-27" version="1">MKYSKHKIKEVFKSKLCCNETLKNYKEIMITVIVIAIIIIMLITLVFGTMHIIRDSIYTMRLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC25</accession>
    <name>A0A0D5ZC25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12790"/>
    <dbReference type="EnsemblBacteria" id="AKA44330">
        <property type="protein sequence ID" value="AKA44330"/>
        <property type="gene ID" value="PPSC2_25295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5363"/>
    <dbReference type="eggNOG" id="ENOG5033BM4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_191190_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025626">
        <property type="entry name" value="YyzF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14116">
        <property type="entry name" value="YyzF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04129">
        <property type="entry name" value="CxxH_BA5709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="72" mass="8424" checksum="E3CD59CA4CB4D163" modified="2015-05-27" version="1">MTHLQQEELQTERDATGMYVVCKEHVELAIDMFVDEYEDAPDVVDLKETKFSDWDPPVKCKECEKKAEFLVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCE8</accession>
    <name>A0A0D5ZCE8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycerol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44249">
        <property type="protein sequence ID" value="AKA44249"/>
        <property type="gene ID" value="PPSC2_12680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2696"/>
    <dbReference type="eggNOG" id="COG0371">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2701334_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="73" mass="7667" checksum="5894752C4A4F0001" modified="2015-05-27" version="1">MAVGKQFGIFAYILAEPMGSSEGYTPSAVGTNAALALAKLCYEMLLTDGAKSKVASDSKKGNLKKQKITQPNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCP4</accession>
    <name>A0A0D5ZCP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Spore gernimation protein GerQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yraG3</name>
        <name evidence="1" type="ORF">PPSC2_24880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324904.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12370"/>
    <dbReference type="EnsemblBacteria" id="AKA44327">
        <property type="protein sequence ID" value="AKA44327"/>
        <property type="gene ID" value="PPSC2_24880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5273"/>
    <dbReference type="HOGENOM" id="CLU_191305_0_0_9"/>
    <dbReference type="OrthoDB" id="1957624at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="9320" checksum="FF7780A668166CCF" modified="2015-05-27" version="1">MISQQPTLAAHESLEIHEVLNFKTLCLAKSKLMQGLVFDQELKDLMEKDVQQSIQAIADLQAIYAKAPFQAPVPDFRPTPILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E476</accession>
    <name>E3E476_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Sucrose-6-phosphate hydrolase</fullName>
            <ecNumber evidence="3 8">3.2.1.26</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7 9">Invertase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">cscA</name>
        <name evidence="12" type="ORF">PPSC2_12425</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Enables the bacterium to metabolize sucrose as a sole carbon source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.</text>
            <dbReference type="EC" id="3.2.1.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Glycan biosynthesis; sucrose metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.26" evidence="3 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56616.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00115"/>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56616">
        <property type="protein sequence ID" value="ADO56616"/>
        <property type="gene ID" value="PPSC2_12425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2635"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001528_7_0_9"/>
    <dbReference type="UniPathway" id="UPA00238"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004564">
        <property type="term" value="F:beta-fructofuranosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005985">
        <property type="term" value="P:sucrose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006232">
        <property type="entry name" value="Suc6P_hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01322">
        <property type="entry name" value="scrB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="10">
        <location>
            <begin position="27"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="11">
        <location>
            <begin position="354"/>
            <end position="481"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56616.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="489" mass="55987" checksum="9768B20CB63FDA17" modified="2015-05-27" version="2">MNNTKQAEEALKQAEAKMNKRYRLGYHIMAPANWINDPNGLIQFKGEYHAFYQHHPYDENWGPMHWGHVKSKDLVHWEHCPIALAPGDACDLDGCFSGSAVDNNGELTLIYTGHHYIDQPSNIFFQNQNVAVSTDGIHFTKLRQNPVIAEPPTDSSQHFRDPKVWKHEDTWYMILGNSTKEDLPRVILYTSPDLRTWTYHGVLLQGDKNMGFMWECPDFFELNGKHIFMFSPQGINAQGDKYNNLFQTGYYVGEYNYASNEYKHGEFIELDTGHDFYAVQTFLDDQGRRIALGWMDMWESDMPTKADGWCGAMTIPRLITLGDNNRVLMTPVEEMKLLRQSKHVLYQYGAISGSYFKEVEEDLLEVKVVFDLTKSSADLVGLKFRGAGREETVITYSILEQKLMLNCSKSGKKTDGVRQTAFNAEGQLTLHVYLDRSSIEMFANEGQATMTSRIYPSEKLLGIEIITEGGEALVNGLTYWKLKDIWQAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G2</accession>
    <name>E3E4G2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphoenolpyruvate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ppsA</name>
        <name evidence="3" type="ORF">PPSC2_12805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371306.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00395"/>
    <dbReference type="EnsemblBacteria" id="ADO56702">
        <property type="protein sequence ID" value="ADO56702"/>
        <property type="gene ID" value="PPSC2_12805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2726"/>
    <dbReference type="eggNOG" id="COG0574">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3848">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005950_0_0_9"/>
    <dbReference type="OMA" id="WTRKIAA"/>
    <dbReference type="OrthoDB" id="997616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008279">
        <property type="entry name" value="PEP-util_enz_mobile_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036637">
        <property type="entry name" value="Phosphohistidine_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002192">
        <property type="entry name" value="PPDK_AMP/ATP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00391">
        <property type="entry name" value="PEP-utilizers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01326">
        <property type="entry name" value="PPDK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52009">
        <property type="entry name" value="SSF52009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPDK_N" evidence="2">
        <location>
            <begin position="18"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="PEP-utilizers" evidence="1">
        <location>
            <begin position="796"/>
            <end position="867"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="872" mass="97577" checksum="DDBEE20261CD5DDA" modified="2011-01-11" version="1">MNSLVLDFQEMDNTQLLLVGGKGLHLGALTKMEGIQVPEGFCVTTLGYQKAIEQNEIVHAFLDQLATLKVEDREQIDDISKKIRQAIMEVAIPSDVVKAVAHYLSQFGDEYAYAVRSSATAEDLPHASFAGQQDTYLNIIGKESILEHIRKCWASLFTERAVIYRMLNGFDHSQVYLSVIVQRMVFPQASGILFTADPINGNRKLLSIDASFGLGEALVSGLVSADCYQVQNGVIVSKRIETKKMAIYGRKEGGTETKQLNPDQQKTQTLTDQQILQLARIGRQIEEHFGCPQDIEWCLADDIFYIVQSRPITTLYPIPEANDQENHVYVSVGHQQMMTDPIKPLGISVWMLTGATPMFKTGGGRLFVDITMGLASPDGRQNLLDVLGHSDPLIKDALITIIERGDFIKLDPSDKSEPGPVKSHKGMSSADILAEAGNDPAIVVDLIKSSETSLSALKHNTQTKSGLDVLDCILEDMQQRRQRASDLKNLSVIMSAIHASAWINEKMDEWLGEKNVADTLSLSVPNNVTSEMGMELLDVADVIRPYPKIIEYLQQVKDDNFLEELVQFEGGQQVRDVITAYLDKYGMRCAGEIDITRTRWSEKPNILVPMILSNIKNLEPGASKRKFEQGRQEAMKKEQDLLARLKQLPDGEQKAEETKQMIDQIRNFIGYREYPKYDIVSRYFIYKQALLKEAERLVQANVLHEKEDIYYLAFEELQETIRTNKLDYQVIDKRKDEYRLYEKLTPPRVITSDGEIITGQYKRENIPAKAIVGLAVSSGVVEGRARVLLNIEGADLEDGDILVTAFTDPSWTPLFLSIKGLVTEVGGLMTHGAVIAREYGLPAVVGVENATKSIKDGQRIRVHGTEGYIEFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S9</accession>
    <name>E3E4S9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">IDEAL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371655.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02160"/>
    <dbReference type="EnsemblBacteria" id="ADO57057">
        <property type="protein sequence ID" value="ADO57057"/>
        <property type="gene ID" value="PPSC2_14505"/>
    </dbReference>
    <dbReference type="GeneID" id="66577078"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3095"/>
    <dbReference type="eggNOG" id="ENOG503056E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_199532_2_0_9"/>
    <dbReference type="OMA" id="KMKVTYE"/>
    <dbReference type="OrthoDB" id="2009082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014957">
        <property type="entry name" value="IDEAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027393">
        <property type="entry name" value="Virus_scaffolding_prot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08858">
        <property type="entry name" value="IDEAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00914">
        <property type="entry name" value="IDEAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IDEAL" evidence="1">
        <location>
            <begin position="19"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6760" checksum="F8A8C213F39153E8" modified="2011-01-11" version="1">MDKMKVTYEVMLGLSAEMVLDEALRKHRSEKLYKDIDEALASGDEVAFRHLTDELKAMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y3</accession>
    <name>E3E4Y3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoIIIAF</name>
        <name evidence="3" type="ORF">PPSC2_15125</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371783.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3232"/>
    <dbReference type="EnsemblBacteria" id="ADO57191">
        <property type="protein sequence ID" value="ADO57191"/>
        <property type="gene ID" value="PPSC2_15125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3228"/>
    <dbReference type="eggNOG" id="ENOG50338QT">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094201_2_0_9"/>
    <dbReference type="OMA" id="DMILPSR"/>
    <dbReference type="OrthoDB" id="1455925at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014245">
        <property type="entry name" value="Spore_III_AF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09581">
        <property type="entry name" value="Spore_III_AF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="185"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="199"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="28257" checksum="621B2E498162EBFF" modified="2011-01-11" version="1">MTWLGGWLKELVLIVLLASFVDMILPSRSMERYVKLVLSLLVLLTLLSPIVRLLSSSPSEVLGRALDLQRQAETGNREPTLEEILAKGNKLKQQQEQSSMQWAGKEVAKEMKGQLEQYTGLAIQSVQVTLAQIQQKESGLEAGTGVQSVVVKLAEQKAEKEKNTNVPPDTDIKPVIVEPVAEKTVNIRVEPTQSKTSNHNEGTREDDRSPDETTEDGKPADQKAFGLITGILREKWGIDSTHVQVINSQDGTHEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E523</accession>
    <name>E3E523_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">terC1</name>
        <name evidence="2" type="ORF">PPSC2_15310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371821.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3272"/>
    <dbReference type="EnsemblBacteria" id="ADO57231">
        <property type="protein sequence ID" value="ADO57231"/>
        <property type="gene ID" value="PPSC2_15310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3271"/>
    <dbReference type="eggNOG" id="COG0861">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070543_0_1_9"/>
    <dbReference type="OMA" id="KAIFWGS"/>
    <dbReference type="OrthoDB" id="1917125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005496">
        <property type="entry name" value="Integral_membrane_TerC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022301">
        <property type="entry name" value="Integral_membrane_YjbE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03741">
        <property type="entry name" value="TerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03717">
        <property type="entry name" value="R_switched_YjbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="194"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="24682" checksum="5660D18E3B07BC14" modified="2011-01-11" version="1">MDFLSIEFLTALLSIIIIDLVLAGDNAIVIGLAARNVDKANQKKVIIWGTVGAVIIRVIATVLVTYLLQIYGLRLVGGLALIYIAYKLLVEEKKHEISATNQMWAAIRTIIIADTMMGLDNVLAVAGAAHGNMLLVILGLAISVPIMVWGSTIILKLTERYPVVITIGAAVLAYTAAKMVVAEPLIAHWFANGVVKYGFEALIVVLVVAIGMRVKKVKSEKTKKEALHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E526</accession>
    <name>E3E526_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Lipid II flippase Amj</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydaH</name>
        <name evidence="1" type="synonym">amj</name>
        <name evidence="2" type="ORF">PPSC2_15325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the Amj family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57234.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599999.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02950"/>
    <dbReference type="EnsemblBacteria" id="ADO57234">
        <property type="protein sequence ID" value="ADO57234"/>
        <property type="gene ID" value="PPSC2_15325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3274"/>
    <dbReference type="eggNOG" id="ENOG502ZBN3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059888_1_0_9"/>
    <dbReference type="OrthoDB" id="1354100at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015648">
        <property type="term" value="F:lipid-linked peptidoglycan transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02077">
        <property type="entry name" value="Amj_flippase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021260">
        <property type="entry name" value="Amj"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10997">
        <property type="entry name" value="Amj"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0133">Cell shape</keyword>
    <keyword evidence="1" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57234.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="267" mass="29263" checksum="FCA3236E97725F6A" modified="2015-05-27" version="2">MLAWGFVFLLTIIIHTTDSLSYALRLGGLRARRIGLALTVAGMLLLVSRTSNMAQGPLLGGMVDQAKEAAQLGGTDMRLELYMHGVLLAATVGTMLAILLYPTVVRMSARWIVHLEHTGSIPALIRHLMRRNRWKHAGYYIKRPSWSMFTSLISGVIPKRLIILNIAVTAIYTTGVVSALYASFLWPAQGTAMSMSSGLINGVATVLLTLLIDPRLAVLSEKTLRGELPLIRMNSVYGWMIISRLAGTLLAQLLLVPLAIWLGWVMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5C5</accession>
    <name>E3E5C5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Molecular chaperone DnaK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yteA3</name>
        <name evidence="7" type="ORF">PPSC2_16515</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372071.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03850"/>
    <dbReference type="EnsemblBacteria" id="ADO57485">
        <property type="protein sequence ID" value="ADO57485"/>
        <property type="gene ID" value="PPSC2_16515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3526"/>
    <dbReference type="eggNOG" id="COG1734">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043144_1_1_9"/>
    <dbReference type="OMA" id="TCIQHAT"/>
    <dbReference type="OrthoDB" id="1932026at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037187">
        <property type="entry name" value="DnaK_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014240">
        <property type="entry name" value="YteA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000962">
        <property type="entry name" value="Znf_DskA_TraR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01258">
        <property type="entry name" value="zf-dskA_traR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109635">
        <property type="entry name" value="SSF109635"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02890">
        <property type="entry name" value="bacill_yteA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51128">
        <property type="entry name" value="ZF_DKSA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DksA C4-type" evidence="6">
        <location>
            <begin position="52"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="dksA C4-type" evidence="4">
        <location>
            <begin position="95"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="23"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="32"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="27737" checksum="4DF82AC428833DA7" modified="2011-01-11" version="1">MSPLTEQQLQGLRNELLERKKEIEHRLQSNDHYGLGDSQRDQTGELSPIDNHPGDLATETYERAKDISLLEHDEFQLERIKSALMAMDKGTYGICAASGKPIPYERLLAVPYTIYCKEYSPETEVSNNRPVEEEFLAPAFGRTSLDEREEQNGFDGEDAWQIVENWGTSNTPAMAESGEIHRYDDMEIEAGDDNMGFVEPYESFVATDIYGRNVSIVRSSIYQRYIEDGEGEGLLEPDLHEDES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5I6</accession>
    <name>E3E5I6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO57705.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57705">
        <property type="protein sequence ID" value="ADO57705"/>
        <property type="gene ID" value="PPSC2_17530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3745"/>
    <dbReference type="HOGENOM" id="CLU_2586435_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9617" checksum="27FD2D885F36FA90" modified="2011-01-11" version="1">MDISPELSEVAFEDKDDFYDHSWLLLKDLINFKWDENYYCDQFMEYRNIMDTCSGFINETIPKLSKLGNAEDVRVIFWFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5P4</accession>
    <name>E3E5P4_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">betI2</name>
        <name evidence="3" type="ORF">PPSC2_18520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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    <dbReference type="eggNOG" id="COG1309">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_12_9_9"/>
    <dbReference type="OMA" id="EDQYGLL"/>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
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    </dbReference>
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        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
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        <property type="entry name" value="Homeobox-like_sf"/>
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    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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            <begin position="8"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
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            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="21669" checksum="3C668141ED416C53" modified="2011-01-11" version="1">MNKKTHVDSKKKDILQAAMCLFATKGIDGISVKEIAEAAGVTDAAIYKHFKSKDAMALEVFGQYCNSYTTLIDFYRKQSGSFLSRFHQLVDEVLNMHDEDQYGLLLLSQHHELYVEASQNQNVRQPLEALTEFIEQGIQQGELPKQDVQLSGVLIIGAITRLSVSSLEGELPQQLVPFAVEIKQRLTALLSKGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5P7</accession>
    <name>E3E5P7_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Collagen alpha-5(VI) chain</fullName>
        </submittedName>
    </protein>
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    </gene>
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        <name type="synonym">Bacillus polymyxa</name>
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        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372503.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05745"/>
    <dbReference type="EnsemblBacteria" id="ADO57924">
        <property type="protein sequence ID" value="ADO57924"/>
        <property type="gene ID" value="PPSC2_18530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3971"/>
    <dbReference type="eggNOG" id="COG2931">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089626_0_0_9"/>
    <dbReference type="OMA" id="AQYGTTH"/>
    <dbReference type="OrthoDB" id="1928011at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025237">
        <property type="entry name" value="DUF4183"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13799">
        <property type="entry name" value="DUF4183"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0176">Collagen</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4183" evidence="2">
        <location>
            <begin position="127"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="20380" checksum="13333F70F9A95770" modified="2011-01-11" version="1">MEHTGKQGLPGEAGVTGAPGVPGIAGTPGIPGIQGPAGTQGAPGVPGPAGAPGSSGATGAPGPTGAQGIPGPTGAQGIPGSTGAQGVTGPTGGQGITGPTGPAPDISNVEIVPRAERYFYFTPDPIESSVTIMADQFSVDGVQGAFQRFHVGSNSYANLYINGMLQERTLFSLTPSSLTIHLSEGETISSGTPIIVEIVQFSVRYSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5S4</accession>
    <name>E3E5S4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">tetV</name>
        <name evidence="9" type="ORF">PPSC2_18650</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4001"/>
    <dbReference type="EnsemblBacteria" id="ADO57951">
        <property type="protein sequence ID" value="ADO57951"/>
        <property type="gene ID" value="PPSC2_18650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3996"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034180_17_3_9"/>
    <dbReference type="OMA" id="LWQMMLL"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="95"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="195"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="248"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="281"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="315"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="340"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="379"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="403"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="29"/>
            <end position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="430" mass="46812" checksum="D5F35860DF38CF75" modified="2011-01-11" version="1">MDTHNTTLSPEGRHSAWATFTSPLKQSKAFTLLWLGHWIAMLGSSVTTVILPLVIYSLTGSTTIMGLAMTVYMLPNVLILPFAGMIVDRIDRIRLLLFTNVARFGLMLVASVLMFTDGMKLPFLFVGLALYGLMDGIFNPAYSALRAQVFTPDIRNAANALSQISIQAVRLLGPPLGGFIVSFSSPGVGFGLDSIAYLVSFACFWMLSAHLASIIGKRQADSEQEDQGGQHFLKDFIAGFAILRSHPWLWITILAFSFINICYSGIIAVLIPWLFKVHHGYNPVVYGIAMASSGIGAMLGAFVYGSRKHWKHRGLLAYLGAFVSGLALLLLSIVTWMPGLIMSMMLEGFGIMIFAIIWETSLQELVPAESFGRVASLDLMFSFALLPVGYLAVGAVADKLGGILTIGMFATIGMCIVLGVLIVPHIRRFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5X5</accession>
    <name>E3E5X5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">tlpB1</name>
        <name evidence="12" type="ORF">PPSC2_19855</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372766.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07075"/>
    <dbReference type="EnsemblBacteria" id="ADO58194">
        <property type="protein sequence ID" value="ADO58194"/>
        <property type="gene ID" value="PPSC2_19855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4231"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="GSEHIGN"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168638" evidence="9">
        <location>
            <begin position="39"/>
            <end position="659"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="274"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="298"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="10">
        <location>
            <begin position="369"/>
            <end position="605"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="659" mass="70871" checksum="0BE58756E8D53346" modified="2011-01-11" version="1">MKQLKRLKTLTLRKKLTAAFLLVMLVPSIIVGSFSYQAAYNQTDRQLQDSATSSVTASDRAVTQTIQAKLADLEYYSTTLTASDDSAEADDAILKRLQVYLKMHTEVVDMFVGTPEGKLIIGKAVGSTNDPRERPWYKQAMEKPGQTVISPVGLNTAKVPVVYISRTLPDNSGVLGLSLNLNNLKEITKLRIGQNGYIVIFDSTKRIVTHPTEVSGSTEMGEKTPELFASKEGSFDHNDAGVAKHLIFKTNELTGWKIAGTMDKSETRASAQPILLTTIVVLVIAAIIIGVLAMWLISSILKPIHRLRNSMDAISQGNLSINVATNSTDEIGELSRYFQQMVDNLRNMIREIQAMTGNLSASSQELAAGAEQTTRAIEHVTIAIQDVAAGSERQVDSAKDNQERVSGMSADITAMTDTMAEMTTYSAQAIQASDAGSEHIGNSVISIDGIRTTVEELDTIISALSDRSGRIGTIVTVITEIASQTNLLALNASIEAARAGEHGKGFAVVATEVRKLAENSAYSAQQIREQIQGIQSGVSEALIAMESAKERVTEGINSIDLSGRSFSRIRRAVAKSAKQLDNVAASTAGVANGTNAVVSSMEEITRIAEEAASHTETVSAAAEEQLASMEEIGSSAADLTRLAEQLQDLLTQFQLDETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E635</accession>
    <name>E3E635_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12880</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371324.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00565"/>
    <dbReference type="EnsemblBacteria" id="ADO56720">
        <property type="protein sequence ID" value="ADO56720"/>
        <property type="gene ID" value="PPSC2_12880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2745"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_6_0_9"/>
    <dbReference type="OMA" id="GHEHWHP"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="135"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="40266" checksum="F12899296900F626" modified="2011-01-11" version="1">MKKMKVGIIGCGKISGIYMENCHRFDILELFAVADLDQSRAEEQAIAFNVPNVYSVDEILADPQIELIINLTIPAVHAEVCLRALEAGKHVYVEKPLAVTRKQGQAVLDLAHQKGLLVGCAPETFFGSGIQTSLKLIEDGVIGNPVAATAFMMSRGHEHWHPDPEFYYADGGGPMFDMGPYYLTALVQLLGPIATISGMTSKAMDQRTITSEKKRGQTIPVDIPTHVAGLLRFKQGAVGTLITSFDIFGGSTLPPIEVYGTHGTLQVPDPNTFGGPVRFRLLGEHNWTEVPLLPGYQENTRGIGVADMAYAIRNGRPHRASGELAYHVLEAMWAFHDSSDQQTFYTMQSTCQRPAALPENLPLYTLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E2</accession>
    <name>E3E6E2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">msmR9</name>
        <name evidence="3" type="ORF">PPSC2_18920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372588.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06130"/>
    <dbReference type="EnsemblBacteria" id="ADO58011">
        <property type="protein sequence ID" value="ADO58011"/>
        <property type="gene ID" value="PPSC2_18920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4055"/>
    <dbReference type="eggNOG" id="COG4977">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="ENRYHEH"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="182"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="33143" checksum="5546542D07C9B512" modified="2011-01-11" version="1">MQAHSYSYAVASNPVFYENSPLHVLFAGESQTKSGHAVGPKIYDYYLLHFVESGKGIFRTEQHTYQLKKNDFFLIHPGQLVSYTSDEEEPWRYRWSAFTGHHTEQVVQEAGLRVHQPVFHAADQSPIPSYLEQMQLAFYSRKSSSHLSALGYLYLIMGEASNYLSDWTDPSGADSQIRRTVKQMVQYMSTQYAHPVSIEQMSEGLGYNRAYLSRIFKKETGISPVTYLLKLRIDKSRQLLRERPELSVEQVAASVGLTDALYFSRQFKRFCGQSPTEYRSKVKQYPQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E5</accession>
    <name>E3E6E5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NAD-dependent protein deacetylase</fullName>
            <ecNumber evidence="4">2.3.1.286</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Regulatory protein SIR2 homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cobB</name>
        <name evidence="6" type="ORF">PPSC2_18930</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>H2O + N(6)-acetyl-L-lysyl-[protein] + NAD(+) = 2''-O-acetyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide</text>
            <dbReference type="Rhea" id="RHEA:43636"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:10731"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17154"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:61930"/>
            <dbReference type="ChEBI" id="CHEBI:83767"/>
            <dbReference type="EC" id="2.3.1.286"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the sirtuin family. Class U subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.286" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372591.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06140"/>
    <dbReference type="EnsemblBacteria" id="ADO58014">
        <property type="protein sequence ID" value="ADO58014"/>
        <property type="gene ID" value="PPSC2_18930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4057"/>
    <dbReference type="eggNOG" id="COG0846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023643_3_0_9"/>
    <dbReference type="OMA" id="SMQVYPA"/>
    <dbReference type="OrthoDB" id="1264438at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034979">
        <property type="term" value="F:NAD-dependent protein deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006476">
        <property type="term" value="P:protein deacetylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01968">
        <property type="entry name" value="Sirtuin_ClassU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003000">
        <property type="entry name" value="Sirtuin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026591">
        <property type="entry name" value="Sirtuin_cat_small_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028628">
        <property type="entry name" value="Sirtuin_class_U"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026590">
        <property type="entry name" value="Ssirtuin_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02146">
        <property type="entry name" value="SIR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50305">
        <property type="entry name" value="SIRTUIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Deacetylase sirtuin-type" evidence="5">
        <location>
            <begin position="4"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="103"/>
            <end position="106"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="191"/>
            <end position="193"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="215"/>
            <end position="217"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="27266" checksum="5EE330235CEA6145" modified="2011-01-11" version="1">MKVNTLAEWIQQSQNIVFFGGAGTSTESGIPDFRSAAGLYQSEEKLPYSPEVMLSRSFFVKHPEVFFDFYRSKMLHPDAKPNGCHHFLASLEKQGRLKAVVTQNIDGLHQAAGSRNVLELHGSVHRNYCMECGRFYGLNEVMNSSEVVPKCPVDGGIIKPDVVLYEEELNQDTLIQSIQAISQADLLLIGGTSLTVHPAAGLITYFHGKHTVLLNTDPTSYDHKADLLITEPIGKVMEKLAHQLDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6F1</accession>
    <name>E3E6F1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="14 15">Dihydroxy-acid dehydratase</fullName>
            <shortName evidence="15">DAD</shortName>
            <ecNumber evidence="14 15">4.2.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15 16" type="primary">ilvD</name>
        <name evidence="16" type="ORF">PPSC2_18955</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>(2R)-2,3-dihydroxy-3-methylbutanoate = 3-methyl-2-oxobutanoate + H2O</text>
            <dbReference type="Rhea" id="RHEA:24809"/>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:49072"/>
            <dbReference type="EC" id="4.2.1.9"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="11">
            <dbReference type="Rhea" id="RHEA:24810"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>(2R,3R)-2,3-dihydroxy-3-methylpentanoate = (S)-3-methyl-2-oxopentanoate + H2O</text>
            <dbReference type="Rhea" id="RHEA:27694"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:35146"/>
            <dbReference type="ChEBI" id="CHEBI:49258"/>
            <dbReference type="EC" id="4.2.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="15">Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="13 15">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 3/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="12 15">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">Belongs to the IlvD/Edd family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.9" evidence="14 15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58019.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324645.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06165"/>
    <dbReference type="EnsemblBacteria" id="ADO58019">
        <property type="protein sequence ID" value="ADO58019"/>
        <property type="gene ID" value="PPSC2_18955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4062"/>
    <dbReference type="eggNOG" id="COG0129">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014271_4_2_9"/>
    <dbReference type="OrthoDB" id="193579at2"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00057"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00061"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004160">
        <property type="term" value="F:dihydroxy-acid dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00012">
        <property type="entry name" value="IlvD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042096">
        <property type="entry name" value="Dihydro-acid_dehy_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004404">
        <property type="entry name" value="DihydroxyA_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000581">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020558">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037237">
        <property type="entry name" value="IlvD/EDD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00920">
        <property type="entry name" value="ILVD_EDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143975">
        <property type="entry name" value="SSF143975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00110">
        <property type="entry name" value="ilvD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00886">
        <property type="entry name" value="ILVD_EDD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00887">
        <property type="entry name" value="ILVD_EDD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 15" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="3 15" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="10 15" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="7 15" id="KW-0408">Iron</keyword>
    <keyword evidence="8 15" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9 15" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 15" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="477"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="126"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" description="via carbamate group" evidence="15">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="451"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-carboxylysine" evidence="15">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00029436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00029437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00029490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO58019.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="562" mass="60174" checksum="BA9179709E568BF9" modified="2015-05-27" version="2">MTAKTKMRSDMIKKGFDRAPHRSLLRAAGVKEEDFDKPFIAVCNSYIDIVPGHVHLQEFGKIVKQAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADSLETVVSAHWFDGMVCIPNCDKITPGMMMGALRVNIPTIFVSGGPMKAGKDKNGRSISLTSVFEGVGAFQAGKIDDQSLLELEQYGCPTCGSCSGMFTANSMNCLAEAMGLAMPGNGTILAVAEERKEFVKQSARQLMELIKLDLKPRDIVTKEAIDNAFALDMAMGGSTNTVLHTLALAHEAEVDYPIERINEVANRVPHLSKLAPASDYHIEDVHNAGGVSAVLNELLKKPGALHGDCITVTGKTIRENVEGQEILDTNVIHKLDNPYSERGGLAVLFGNLAPQGSIIKVGAVDPSVGGYHKGPAICFDSQEDALAGIANGKIAEGHVVVIRYEGPKGGPGMPEMLAPTSQIVGMGLGAKVGLITDGRFSGASRGISIGHISPEAAEGGPIAFVEDGDIIELDLNNRKIELHITDEEFDRRRANWKGFEPKVKTGYLARYSKLVTNASNGGIMKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H7</accession>
    <name>E3E6H7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Putative fluoride ion transporter CrcB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">crcB</name>
        <name evidence="10" type="ORF">PPSC2_19085</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Important for reducing fluoride concentration in the cell, thus reducing its toxicity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the CrcB (TC 9.B.71) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372621.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06285"/>
    <dbReference type="EnsemblBacteria" id="ADO58046">
        <property type="protein sequence ID" value="ADO58046"/>
        <property type="gene ID" value="PPSC2_19085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4089"/>
    <dbReference type="eggNOG" id="COG0239">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114342_1_2_9"/>
    <dbReference type="OMA" id="EWRLFLI"/>
    <dbReference type="OrthoDB" id="1942863at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1903425">
        <property type="term" value="F:fluoride transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00454">
        <property type="entry name" value="CrcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003691">
        <property type="entry name" value="CrcB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28259">
        <property type="entry name" value="PTHR28259"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02537">
        <property type="entry name" value="CRCB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00494">
        <property type="entry name" value="crcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="133" mass="14315" checksum="8E42F1F5E0D329E5" modified="2011-01-11" version="1">MKDVLFVAAGGAIGTSARYSLQLLLPAAGADFPLGVLLMNWLGCLFLGWFFTVTLRSWRIKPHLRLAIGTGFTGGFTTFSTFAVDAVRLTVHDRMLTAVLYLLLSVGVGLLLTWAGIRLGTKMTQTAPKGGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Z1</accession>
    <name>E3E6Z1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 6">50S ribosomal protein L36</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpmJ</name>
        <name evidence="7" type="ORF">PPSC2_22310</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the bacterial ribosomal protein bL36 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_003333770.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E6Z1"/>
    <dbReference type="STRING" id="1406.LK13_09775"/>
    <dbReference type="EnsemblBacteria" id="ADO58694">
        <property type="protein sequence ID" value="ADO58694"/>
        <property type="gene ID" value="PPSC2_22310"/>
    </dbReference>
    <dbReference type="GeneID" id="61575014"/>
    <dbReference type="GeneID" id="64220781"/>
    <dbReference type="GeneID" id="66669947"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4731"/>
    <dbReference type="eggNOG" id="COG0257">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_135723_6_2_9"/>
    <dbReference type="OrthoDB" id="2066169at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00251">
        <property type="entry name" value="Ribosomal_L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000473">
        <property type="entry name" value="Ribosomal_L36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035977">
        <property type="entry name" value="Ribosomal_L36_sp"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42888">
        <property type="entry name" value="PTHR42888"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00444">
        <property type="entry name" value="Ribosomal_L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57840">
        <property type="entry name" value="SSF57840"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01022">
        <property type="entry name" value="rpmJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00828">
        <property type="entry name" value="RIBOSOMAL_L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="37" mass="4291" checksum="09C9A9E0714F4CF3" modified="2011-01-11" version="1">MKVRPSVKPICEKCKVIRRKGNVMVICENPKHKQKQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Z9</accession>
    <name>E3E6Z9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">50S ribosomal protein L30</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">rpmD</name>
        <name evidence="8" type="ORF">PPSC2_22345</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2 5">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373260.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09810"/>
    <dbReference type="EnsemblBacteria" id="ADO58701">
        <property type="protein sequence ID" value="ADO58701"/>
        <property type="gene ID" value="PPSC2_22345"/>
    </dbReference>
    <dbReference type="GeneID" id="66575598"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4738"/>
    <dbReference type="eggNOG" id="COG1841">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_131047_2_1_9"/>
    <dbReference type="OMA" id="GKQNQRD"/>
    <dbReference type="OrthoDB" id="2084745at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01658">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01371_B">
        <property type="entry name" value="Ribosomal_L30_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036919">
        <property type="entry name" value="L30_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005996">
        <property type="entry name" value="Ribosomal_L30_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018038">
        <property type="entry name" value="Ribosomal_L30_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016082">
        <property type="entry name" value="Ribosomal_L30_ferredoxin-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15892">
        <property type="entry name" value="PTHR15892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00327">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002211">
        <property type="entry name" value="Ribosomal_L30_bac-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55129">
        <property type="entry name" value="SSF55129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01308">
        <property type="entry name" value="rpmD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00634">
        <property type="entry name" value="RIBOSOMAL_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_L30" evidence="7">
        <location>
            <begin position="5"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="6731" checksum="1862AC484780FCB5" modified="2011-01-11" version="1">MAKLEITLVRSLIGRPGTQRTTVKTLGLRKINHKVVQPDNAAIRGMINQVSHLVSVKEIEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E761</accession>
    <name>E3E761_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cell cycle protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rodA</name>
        <name evidence="7" type="ORF">PPSC2_23345</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373452.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10835"/>
    <dbReference type="EnsemblBacteria" id="ADO58916">
        <property type="protein sequence ID" value="ADO58916"/>
        <property type="gene ID" value="PPSC2_23345"/>
    </dbReference>
    <dbReference type="GeneID" id="66575404"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4943"/>
    <dbReference type="eggNOG" id="COG0772">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029243_2_1_9"/>
    <dbReference type="OMA" id="TGMAMPF"/>
    <dbReference type="OrthoDB" id="1133883at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018365">
        <property type="entry name" value="Cell_cycle_FtsW-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001182">
        <property type="entry name" value="FtsW/RodA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30474">
        <property type="entry name" value="PTHR30474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01098">
        <property type="entry name" value="FTSW_RODA_SPOVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00428">
        <property type="entry name" value="FTSW_RODA_SPOVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="159"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="183"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="285"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="318"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="347"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="397" mass="43351" checksum="9EB69736EAFE8289" modified="2011-01-11" version="1">MLQKLKKIDGPVIFILVLLMAISIITVYSAGRGPTNLAEHGNDYQKMIGYYILGFVAILGLAIVDFRIFIKKALYVYGGGIFLLILGFFGGTVNNSQGFLKIGGLNLQPAEVFKLVLIIFLAYMLIKKRKSKLYFIQDVLPVALVSFVPFAMVMAQNDLGNALGYIVIVIGMLWIGNVKASHALIGFIVFAVAVGGGIKAYISFHDEIDSFMKGIGRSHWVERLDPWLVPEEATAKASYHTKNAKLAIASGGMMGKGFLQGTSVQSGRVPYTYADSIFVVVAEEFGFVGSSILLLLYFILIHRMILISLECRDRAGPYIIVGIVSMLLYQIFENIGAFLGIMPLTGITLPFISYGGTSLLINMASIGLVMSIKVHGQELEDDLPQPSRVSLTKAKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E763</accession>
    <name>E3E763_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Peptide chain release factor 1</fullName>
            <shortName evidence="5">RF-1</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">prfA</name>
        <name evidence="8" type="ORF">PPSC2_23355</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="5">Methylated by PrmC. Methylation increases the termination efficiency of RF1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373454.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10845"/>
    <dbReference type="EnsemblBacteria" id="ADO58918">
        <property type="protein sequence ID" value="ADO58918"/>
        <property type="gene ID" value="PPSC2_23355"/>
    </dbReference>
    <dbReference type="GeneID" id="66575402"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4945"/>
    <dbReference type="eggNOG" id="COG0216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036856_0_1_9"/>
    <dbReference type="OMA" id="ISDHRVG"/>
    <dbReference type="OrthoDB" id="928964at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00093">
        <property type="entry name" value="Rel_fac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005139">
        <property type="entry name" value="PCRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004373">
        <property type="entry name" value="RF-1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03462">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00937">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="SSF75620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00019">
        <property type="entry name" value="prfA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0488">Methylation</keyword>
    <keyword evidence="4 5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PCRF" evidence="7">
        <location>
            <begin position="62"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="55"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="modified residue" description="N5-methylglutamine" evidence="5">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="355" mass="40041" checksum="5C1D12C2F8E9764E" modified="2011-01-11" version="1">MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKTVVEELDAAKAMQAEKLDDEMREMVKMEIEELSARKRELDEKIRILLLPKDPNDDKNVIIEIRGAAGGDEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVSVMPEAEEVDIEILDKDIRVDTFCSSGAGGQSVNTTKSAVRVTHMPTGIVATCQDGKSQNSNKEKALQVLRARISDMMRQEEEAKYAGERKSKVGTGDRSERIRTYNFPQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQADLMEQEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E783</accession>
    <name>E3E783_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373474.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10945"/>
    <dbReference type="EnsemblBacteria" id="ADO58938">
        <property type="protein sequence ID" value="ADO58938"/>
        <property type="gene ID" value="PPSC2_23455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4965"/>
    <dbReference type="eggNOG" id="ENOG5033M2Q">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1150954_0_0_9"/>
    <dbReference type="OMA" id="NTQEVHI"/>
    <dbReference type="OrthoDB" id="1934290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168595" evidence="1">
        <location>
            <begin position="25"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="241" mass="26510" checksum="98334370567BFCDD" modified="2011-01-11" version="1">MFKLLIVILLSMLLSSSVMTSDHPSSSMVTETALSHALASAPEDSTVRLYAVSPSQGLFHSAVLEIGQQRRTFQWSGSADISTAPQLFYRDVNEDGVREAVVILTRASGTGVELQELHIVNVQTMEEYAVESAANAVSQRVHSSVELRDHNRQVHIAVIIDGTTHTMDPKASVFYDDPAQFTKHLDFSSVVMYDAEQFPLHATVSGSVSPSEFVGDLDLKYVYEQGRFRVGPIKFEASSPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E792</accession>
    <name>E3E792_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutathione peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">bsaA5</name>
        <name evidence="7" type="ORF">PPSC2_23490</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glutathione peroxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373483.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10980"/>
    <dbReference type="EnsemblBacteria" id="ADO58947">
        <property type="protein sequence ID" value="ADO58947"/>
        <property type="gene ID" value="PPSC2_23490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4974"/>
    <dbReference type="eggNOG" id="COG0386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029507_2_2_9"/>
    <dbReference type="OMA" id="KVVRFWR"/>
    <dbReference type="OrthoDB" id="1635499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004602">
        <property type="term" value="F:glutathione peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00340">
        <property type="entry name" value="GSH_Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000889">
        <property type="entry name" value="Glutathione_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029759">
        <property type="entry name" value="GPX_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029760">
        <property type="entry name" value="GPX_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592">
        <property type="entry name" value="PTHR11592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00255">
        <property type="entry name" value="GSHPx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000303">
        <property type="entry name" value="Glutathion_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01011">
        <property type="entry name" value="GLUTPROXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00460">
        <property type="entry name" value="GLUTATHIONE_PEROXID_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00763">
        <property type="entry name" value="GLUTATHIONE_PEROXID_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51355">
        <property type="entry name" value="GLUTATHIONE_PEROXID_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 5 7" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="6">
        <location>
            <begin position="1"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000303-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17488" checksum="ED90582D45088468" modified="2011-01-11" version="1">MSVYSYNAVTPANQEVSLETYTGKVLVIVNTASKCGLTPQYGDLQKLYDEYKDRGLVVLGFPCNQFGGQEPGSSEEAAEFCQLNYGVNFPVFAKVDVNGPDTAALFEYLKKQQPGEQEDGTIQWNFTKFIVNREGVPVGRFEPKESPEAMKAAIEQLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E798</accession>
    <name>E3E798_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">RNA helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">deaD3</name>
        <name evidence="10" type="ORF">PPSC2_23520</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373489.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11020"/>
    <dbReference type="EnsemblBacteria" id="ADO58953">
        <property type="protein sequence ID" value="ADO58953"/>
        <property type="gene ID" value="PPSC2_23520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4980"/>
    <dbReference type="eggNOG" id="COG0513">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003041_1_3_9"/>
    <dbReference type="OMA" id="FGCQALV"/>
    <dbReference type="OrthoDB" id="626183at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Q_MOTIF" evidence="9">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="33"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="8">
        <location>
            <begin position="216"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="362"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="379"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="409"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="443"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="471"/>
            <end position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="525" mass="56512" checksum="7BDDC107D7189D09" modified="2011-01-11" version="1">MKNFTALGVEQHWVEALKEQGISAPTPVQQESIPLLMEGQDVIAEAHTGTGKTLAFLLPILQKLNLDKRHPQALVIAPTRELALQITEEAKCLAAAEPSLSLLAVYGGQDVERQLRKLKGGAQLIIGTPGRLLDHLRRGTLDLGGIKMLVLDEADQMLHMGFLNDVETILQEVPYRRQTMLFSATMPAGIRKLARVYMNEPVDVKVKSASSVPVSQIRQVVVQTTDRGKQQALVDMLNTDRPYLAVIFCRTKRRASKLNEELQEMGFESGELHGDLSQNKREQVMKAFREAKLQLLVATDVAARGLDVEGVTHVFNYDMPQDAESYIHRIGRTGRAGGKGVAVTLATPRDVPELRNIQRVAGVTFTSSEGGGQRRPAPDTAERQGRNDRSGRNDRRSFGGNDAGGGRRSGREQSGRRDGANGERRSNRSSSERGGYDRDRSNGGSTRGGQGRSAGQSSGRGGYDRGSSGSERGGQGRSAGQSSGRGGYDRSSGGSARGGQGGRGGQAKGGPRGGQGQGGRRGRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7D0</accession>
    <name>E3E7D0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">cAMP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_24390</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59141.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11885"/>
    <dbReference type="EnsemblBacteria" id="ADO59141">
        <property type="protein sequence ID" value="ADO59141"/>
        <property type="gene ID" value="PPSC2_24390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5165"/>
    <dbReference type="eggNOG" id="COG0664">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075053_3_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018335">
        <property type="entry name" value="Tscrpt_reg_HTH_Crp-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00034">
        <property type="entry name" value="HTHCRP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00042">
        <property type="entry name" value="HTH_CRP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0010">Activator</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="3">
        <location>
            <begin position="3"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="4">
        <location>
            <begin position="138"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59141.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="25101" checksum="47AFF9B879DBD9DD" modified="2015-05-27" version="2">MPIFSSLSCEDLCKVSSMIRHRKYQKGEALIVEEQASDTLYIIKSGHVKLLKMTPQGKEQILHILTTGDFFGELNIFNNDELSNFSAYALKDTDICMLTKDDMDELIRNNPDISLRLLKTITKRLAHTENLAQSLATKDPEIRIAYMILELGHKYGKPDGSYIKINLPLSREEMANYVGVTRETISRKFGKFEQLGIIHIKGTREITIRDVQKLNEYMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E804</accession>
    <name>E3E804_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">resD3</name>
        <name evidence="9" type="ORF">PPSC2_14780</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371713.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02415"/>
    <dbReference type="EnsemblBacteria" id="ADO57117">
        <property type="protein sequence ID" value="ADO57117"/>
        <property type="gene ID" value="PPSC2_14780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3154"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OMA" id="NYEFFGD"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="7"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="136"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="136"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="238" mass="27147" checksum="4E0ADF6A38A66C61" modified="2011-01-11" version="1">MSEQSNRILIVDDEERIRRLLRMYLEKEGYEIEEAEDGEIALQKATASDYSIILLDVMLPGMDGIEVCTRLRQTKSTPVIMLTAKGEEVNRVQGFEVGADDYVVKPFSPREVIYRVKAILRRSSETAFLTKEAVPSNSIVFPNLIIEHDAHRVTAGGIEISLTPKEYELLHYLAVSPDKVFSREELLKDVWNYEFFGDLRTVDTHVKRLREKLNKVSPEAAAMITTVWGVGYKLEVPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E890</accession>
    <name>E3E890_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PTS sugar transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hpr1</name>
        <name evidence="2" type="ORF">PPSC2_15565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371869.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03215"/>
    <dbReference type="EnsemblBacteria" id="ADO57282">
        <property type="protein sequence ID" value="ADO57282"/>
        <property type="gene ID" value="PPSC2_15565"/>
    </dbReference>
    <dbReference type="GeneID" id="66576867"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3324"/>
    <dbReference type="eggNOG" id="COG1925">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2555074_0_0_9"/>
    <dbReference type="OMA" id="YELHVHG"/>
    <dbReference type="OrthoDB" id="1889462at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000032">
        <property type="entry name" value="HPr-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035895">
        <property type="entry name" value="HPr-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00381">
        <property type="entry name" value="PTS-HPr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55594">
        <property type="entry name" value="SSF55594"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="HPr" evidence="1">
        <location>
            <begin position="10"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="8704" checksum="373DF174096EF933" modified="2011-01-11" version="1">MSNNNAAVVEIAQTASKFTSSIVLHSENKYIDVKSILGLFTTLVSSHSYELHVHGPDAEEAKKAIIEVFQKHGLHISVAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8A1</accession>
    <name>E3E8A1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Adenosylhomocysteine nucleosidase</fullName>
            <ecNumber evidence="2">3.2.2.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pfs</name>
        <name evidence="7" type="ORF">PPSC2_15615</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; S-methyl-5-thio-alpha-D-ribose 1-phosphate from S-methyl-5'-thioadenosine (hydrolase route): step 1/2.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.9" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371880.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03265"/>
    <dbReference type="EnsemblBacteria" id="ADO57293">
        <property type="protein sequence ID" value="ADO57293"/>
        <property type="gene ID" value="PPSC2_15615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3334"/>
    <dbReference type="eggNOG" id="COG0775">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031248_2_0_9"/>
    <dbReference type="OMA" id="HDMDVTP"/>
    <dbReference type="OrthoDB" id="1860206at2"/>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00871"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008782">
        <property type="term" value="F:adenosylhomocysteine nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008930">
        <property type="term" value="F:methylthioadenosine nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009164">
        <property type="term" value="P:nucleoside catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010049">
        <property type="entry name" value="MTA_SAH_Nsdase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01704">
        <property type="entry name" value="MTA/SAH-Nsdase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNP_UDP_1" evidence="6">
        <location>
            <begin position="5"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="25069" checksum="1A8787A5E39E5AF1" modified="2011-01-11" version="1">MSRLYGLMGAMDEEIELLLSAMTEASKTTKAGITYTTGMIHGQRVVVCKSGVGKVNAAVTTQILIDHFGVEQIIFTGVAGAVHPDLNIGDIVISSTCMQHDMDVTPLGYARGVIPYQDTSEFAADPELVRLAEQACKSFGDRYIVGKVLSGDQFVASREIVTALHQEMDGACTEMEGAAVAQTAHMNAVPYVVLRSMSDKADGSAHVNYAEFTVEASHRSHRIVEFMLKHLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8C5</accession>
    <name>E3E8C5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nasR</name>
        <name evidence="2" type="ORF">PPSC2_15735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371903.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03430"/>
    <dbReference type="EnsemblBacteria" id="ADO57317">
        <property type="protein sequence ID" value="ADO57317"/>
        <property type="gene ID" value="PPSC2_15735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3358"/>
    <dbReference type="eggNOG" id="COG3707">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1365099_0_0_9"/>
    <dbReference type="OMA" id="KWIDMAK"/>
    <dbReference type="OrthoDB" id="1958442at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005561">
        <property type="entry name" value="ANTAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03861">
        <property type="entry name" value="ANTAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01012">
        <property type="entry name" value="ANTAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50921">
        <property type="entry name" value="ANTAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ANTAR" evidence="1">
        <location>
            <begin position="131"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="200" mass="22489" checksum="283220B004D1C21C" modified="2011-01-11" version="1">MRSLLVIHLHADPASEQANAIPSWQAGPEHLLESNGYLPLPCRNESEIKQLIHNADAAVLNIPVGTISMWSSRLEQTKAIPLLWWCSPISALSSTEACEADVIVDGILTPSMAAHELNWALHFSAKHFFERQHWQSERKQLTARLEERKWIDMAKGILGEVNGIPEAEAYDLLRKKAMNERKRIVDVAISIVKAQQMLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8D2</accession>
    <name>E3E8D2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ywkB</name>
        <name evidence="8" type="ORF">PPSC2_15765</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the auxin efflux carrier (TC 2.A.69) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371910.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03460"/>
    <dbReference type="EnsemblBacteria" id="ADO57324">
        <property type="protein sequence ID" value="ADO57324"/>
        <property type="gene ID" value="PPSC2_15765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3365"/>
    <dbReference type="eggNOG" id="COG0679">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056175_0_2_9"/>
    <dbReference type="OMA" id="HAFTEPI"/>
    <dbReference type="OrthoDB" id="2033473at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="37"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="66"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="110"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="211"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="267"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="299"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="33549" checksum="5A536709CE3FDCB6" modified="2011-01-11" version="1">MATGHIFIILIPIFFVILIGYFAGFFKAFNPASSKGLNTLVTKFALPAHLFIGITTTPRETLIQKWPFLVALLLGVIGFYIVLLILYRLIAKKGLTESSMFALNSTQPSFAFMGIPVLGSLFGSAAVAIPIAITGIVVNAILDPLASILGTVGQRKSTESDDTKGNLFTVTIKSVLHGLSEPLACVPLIGVVLTLCGFQAPKLLQSMFDQIGNITAGTALFAIGVTIGIKKITFSPKALSIAVLKAIVMPMVMLGIAVLIGLSPEDVTKAVLLVAFPGSAVAAMIATRYESLETEAASAFVISSVLSLISLPLLISLLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8I3</accession>
    <name>E3E8I3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Probable tRNA sulfurtransferase</fullName>
            <ecNumber evidence="6">2.8.1.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Sulfur carrier protein ThiS sulfurtransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Thiamine biosynthesis protein ThiI</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">tRNA 4-thiouridine synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">thiI</name>
        <name evidence="9" type="synonym">thiI3</name>
        <name evidence="9" type="ORF">PPSC2_16740</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>[ThiI sulfur-carrier protein]-S-sulfanyl-L-cysteine + a uridine in tRNA + ATP + H(+) + 2 reduced [2Fe-2S]-[ferredoxin] = [ThiI sulfur-carrier protein]-L-cysteine + a 4-thiouridine in tRNA + AMP + diphosphate + 2 oxidized [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:24176"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:13337"/>
            <dbReference type="Rhea" id="RHEA-COMP:13338"/>
            <dbReference type="Rhea" id="RHEA-COMP:13339"/>
            <dbReference type="Rhea" id="RHEA-COMP:13340"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:61963"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:136798"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.8.1.4"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>[sulfur-carrier protein ThiS]-C-terminal Gly-Gly-AMP + AH2 + S-sulfanyl-L-cysteinyl-[cysteine desulfurase] = [sulfur-carrier protein ThiS]-C-terminal Gly-NH-CH2-C(O)SH + A + AMP + H(+) + L-cysteinyl-[cysteine desulfurase]</text>
            <dbReference type="Rhea" id="RHEA:43340"/>
            <dbReference type="Rhea" id="RHEA-COMP:12157"/>
            <dbReference type="Rhea" id="RHEA-COMP:12158"/>
            <dbReference type="Rhea" id="RHEA-COMP:12908"/>
            <dbReference type="Rhea" id="RHEA-COMP:12910"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:61963"/>
            <dbReference type="ChEBI" id="CHEBI:90618"/>
            <dbReference type="ChEBI" id="CHEBI:90619"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ThiI family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.4" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372116.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04075"/>
    <dbReference type="EnsemblBacteria" id="ADO57532">
        <property type="protein sequence ID" value="ADO57532"/>
        <property type="gene ID" value="PPSC2_16740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3572"/>
    <dbReference type="eggNOG" id="COG0301">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037952_4_0_9"/>
    <dbReference type="OMA" id="SMPEFCG"/>
    <dbReference type="OrthoDB" id="773697at2"/>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004810">
        <property type="term" value="F:tRNA adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140741">
        <property type="term" value="F:tRNA U4 sulfurtransferase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034227">
        <property type="term" value="P:tRNA thio-modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01712">
        <property type="entry name" value="ThiI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00021">
        <property type="entry name" value="ThiI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020536">
        <property type="entry name" value="ThiI_AANH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004114">
        <property type="entry name" value="THUMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003720">
        <property type="entry name" value="tRNA_STrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02568">
        <property type="entry name" value="ThiI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02926">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00981">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00342">
        <property type="entry name" value="TIGR00342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51165">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="THUMP" evidence="8">
        <location>
            <begin position="60"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="184"/>
            <end position="185"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="209"/>
            <end position="210"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="288"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="408" mass="45503" checksum="88ACD57F091BF623" modified="2011-01-11" version="1">MHYDMLLLRFGEFTLKGKNRARFEKAVLKHVKLLLKPFPGASLRKEFGRIYVVLGGEPYEQIIQVLQKVFGITTISPVKMAPVELDAIIETAVALMHELNVDEGTTFKVNARRVWKEFPHSSQELNHLIGSPILRTFQALKVDVRQPDIELRVEVREQAAYIFSDVIMAVGGFPLGTNGKAMLLLSGGIDSPVAGWSSMRRGLEIECVHFYSYPFTSERAKEKVIDLAKVLAGYAGRIKIHLVPFTEVQTAFTRTGQDNLIITLMRRSMLRIATMLAEREGALALVTGDSLGQVASQTLSSMNVIGRSTELPLLRPLVMMDKQEITEIAKQIGTYDLSILPYEDCCTLFVPKSPTTNPNLWVVQKIEASIRDLNALIDQAVATTETVVLEAGGAVEGRKEEVIQEDWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8M0</accession>
    <name>E3E8M0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">30S ribosomal protein S21</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rpsU</name>
        <name evidence="7" type="ORF">PPSC2_16900</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the bacterial ribosomal protein bS21 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_005547957.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04235"/>
    <dbReference type="EnsemblBacteria" id="ADO57569">
        <property type="protein sequence ID" value="ADO57569"/>
        <property type="gene ID" value="PPSC2_16900"/>
    </dbReference>
    <dbReference type="GeneID" id="66664470"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3608"/>
    <dbReference type="eggNOG" id="COG0828">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_159258_3_2_9"/>
    <dbReference type="OMA" id="FKRSCQK"/>
    <dbReference type="OrthoDB" id="2088764at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00358">
        <property type="entry name" value="Ribosomal_S21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001911">
        <property type="entry name" value="Ribosomal_S21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018278">
        <property type="entry name" value="Ribosomal_S21_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038380">
        <property type="entry name" value="S21_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21109">
        <property type="entry name" value="PTHR21109"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01165">
        <property type="entry name" value="Ribosomal_S21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00976">
        <property type="entry name" value="RIBOSOMALS21"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00030">
        <property type="entry name" value="S21p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01181">
        <property type="entry name" value="RIBOSOMAL_S21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="57" mass="6758" checksum="96DB859824C2BC5C" modified="2011-01-11" version="1">MSETKVRKNETIDAALRRFKRSIAKDGVLAEVKKRKHYEKPSVKRKKKSEAARKRKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8X6</accession>
    <name>E3E8X6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_19215</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372649.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06415"/>
    <dbReference type="EnsemblBacteria" id="ADO58074">
        <property type="protein sequence ID" value="ADO58074"/>
        <property type="gene ID" value="PPSC2_19215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4116"/>
    <dbReference type="eggNOG" id="COG2385">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021203_3_0_9"/>
    <dbReference type="OMA" id="QSGDYAW"/>
    <dbReference type="OrthoDB" id="1303819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042834">
        <property type="term" value="F:peptidoglycan binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013486">
        <property type="entry name" value="SpoIID/LytB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013693">
        <property type="entry name" value="SpoIID/LytB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007730">
        <property type="entry name" value="SPOR-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036680">
        <property type="entry name" value="SPOR-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30032:SF4">
        <property type="entry name" value="PTHR30032:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08486">
        <property type="entry name" value="SpoIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05036">
        <property type="entry name" value="SPOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110997">
        <property type="entry name" value="SSF110997"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02669">
        <property type="entry name" value="SpoIID_LytB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168653" evidence="1">
        <location>
            <begin position="42"/>
            <end position="697"/>
        </location>
    </feature>
    <feature type="domain" description="SPOR" evidence="2">
        <location>
            <begin position="110"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="SpoIID" evidence="3">
        <location>
            <begin position="309"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="697" mass="73641" checksum="2F7B9691FE0E2BA7" modified="2011-01-11" version="1">MSGDTLNRNKNFGAWTGRLKRAAFFMVLATACIPWPSAVQAAASQEDIRVVIFADLGSKYKATVPAVTLKSSGSLSVGQNSGGSFQAWMGLPDSTARFSVDSYRVKVLEGNEAAAIKAAQALQKTNDKPTVFIGSKNGGSVYQVYAGLYASEQSAQAAVQRISSATGAQAEVKGNKHWSTGSYGSEQEANLVRTTIAAAGFDAFTVIQSRGQYAVWVGEESNDSKLSALKTELESKQPRLTLSKVNTTQTGLILRQEAGVTTGSQVMPHYMLSGSNNSKIIVNGGNNGIQVVERSQRTYRGDMEIGITSGQLALVNEVPLEQYLYSVVGAEVYSSWPAEALKAQAVAARSYALAQGNRFQIGNVVDGTLSQAYNGKSSEHANVNEAVDATAGEVIKSGGKVVEAVFSSNAGGVTADASEVWNSGGEAFASVDSSGDTSAQKGAQEWYHVLLSNGKTGYIREDNAKELEGVTEAGLDKITVTAENTNVRPIPQIQSTVTPVAKAQPGEEMIVLEKVPQSGDYAWVRGPFTAAQIAKSLQGKITGTVPSSVNHLDVTKRGPSGRVLEVEADGTPLKVKYPDMYRSAMGGLPSTLFDIASTGSYTVLGADEATTHVSGTQGTQILSASGSSTLSGNGVVVMNEDRHARVIDKTQSFIFTGKGNGHGLGLSQWGANGLAEQGYDYKKILQHYYKNVDIVKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E921</accession>
    <name>E3E921_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transcriptional regulatory protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">malR3</name>
        <name evidence="6" type="ORF">PPSC2_24770</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373761.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12265"/>
    <dbReference type="EnsemblBacteria" id="ADO59228">
        <property type="protein sequence ID" value="ADO59228"/>
        <property type="gene ID" value="PPSC2_24770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5250"/>
    <dbReference type="eggNOG" id="COG4565">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_39_0_9"/>
    <dbReference type="OMA" id="MRHGALQ"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024187">
        <property type="entry name" value="Sig_transdc_resp-reg_cit/mal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45526">
        <property type="entry name" value="PTHR45526"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006171">
        <property type="entry name" value="RR_citrat_malat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0010">Activator</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2 3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="5">
        <location>
            <begin position="2"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR006171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="27885" checksum="DDE30B74561527B3" modified="2011-01-11" version="1">MKVLIVEDDPMVAELNQQFIERMDNLDVVCKADTVQKAQDCLQKFTPDLVLLDVYLPGKSGLTLLSHMQEQQYHASVILITAAKDIQTVKEAVFYGVADYLIKPFTFERFKLAVEKIQRLATVMEEGNGINQAVIDQYFNKEEPMGVEKKKPAKQLSPNLSKNLSKNLSKLTMTTILKSIQELDGPFSVETLAREVDLSRITVKKYIQFLVDDGFLIESIEYHKIGRPLMLYQINSDIKEPPFPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E978</accession>
    <name>E3E978_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Polyketide biosynthesis enoyl-CoA hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pksH</name>
        <name evidence="1" type="ORF">PPSC2_15890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371937.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03585"/>
    <dbReference type="EnsemblBacteria" id="ADO57351">
        <property type="protein sequence ID" value="ADO57351"/>
        <property type="gene ID" value="PPSC2_15890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3392"/>
    <dbReference type="eggNOG" id="COG1024">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009834_7_3_9"/>
    <dbReference type="OMA" id="MTLMTKP"/>
    <dbReference type="OrthoDB" id="1114675at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="28853" checksum="A9970EF405187559" modified="2011-01-11" version="1">MNYQTIQVRFQDSICYLRFYRPEANNTINNILVEECMHVLALCEESVTIVVLEGLPEVFCLGADFQGMYENMANEHEHAQNPEPLYDLWLKLATGPYITISHVRGKANAGGIGFIAASDIVIADQTAQFSLSELLFGLFPACVLPFLVRRIGFQKANYLTLMTQPIMVQQALSWGLVDVYDAQSDTVLRKHLLRLRRLSKTGILRYKRFMDELSDLRQCKPLALASNQEVFSDAQNLKGIFRYVETGQFPWMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E991</accession>
    <name>E3E991_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371950.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3407"/>
    <dbReference type="EnsemblBacteria" id="ADO57364">
        <property type="protein sequence ID" value="ADO57364"/>
        <property type="gene ID" value="PPSC2_15940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3405"/>
    <dbReference type="eggNOG" id="ENOG503062N">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1925508_0_0_9"/>
    <dbReference type="OrthoDB" id="1896282at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="15502" checksum="F1F92C26D9BA90FB" modified="2011-01-11" version="1">MAILKDKNEEGTWVEFTFKYHIPGEREGCQLNFKYFKINRKVYDLDFGWTNITLKNYIEATSQFPVESLNGFYSSFEKDLYELSWEELDSGTLYQLNFYGSQQDFCLFATKEAIRQFGADLQTDWDLAPLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9B4</accession>
    <name>E3E9B4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_16045</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371973.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03735"/>
    <dbReference type="EnsemblBacteria" id="ADO57387">
        <property type="protein sequence ID" value="ADO57387"/>
        <property type="gene ID" value="PPSC2_16045"/>
    </dbReference>
    <dbReference type="GeneID" id="66576766"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3429"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="HYEIDLG"/>
    <dbReference type="OrthoDB" id="750230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="33715" checksum="52C48CF76A9D6CC1" modified="2011-01-11" version="1">MDQSLIVFVRVAEKQNFTRAAEALHMTQPAVSQYIQTLERSVGTRLLERSNKYVRLTKAGEIVYHHAQEIIRLHTRMQYLVDELMHTAKGNLSIGASYTYGEYVLPHVIAQMRIQYPLIQPSITIGNTLEIEKLVIHNQLDVGIIEGEFQHDHLHIESFADDEMVIVVPQNHRLAGTSQVDINELHDDIWILREEGSGTREAAEKMFAQLRFYPSHMMNFGSTQIIKESVEAGLGISLLSQWVIQKELALGTLEVLDILNLPFIRKFSFLTPSAVFETKATTAFLEILRDYNVKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9L0</accession>
    <name>E3E9L0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YbbK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ybbK</name>
        <name evidence="1" type="ORF">PPSC2_17235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372222.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04570"/>
    <dbReference type="EnsemblBacteria" id="ADO57641">
        <property type="protein sequence ID" value="ADO57641"/>
        <property type="gene ID" value="PPSC2_17235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3680"/>
    <dbReference type="eggNOG" id="COG1683">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076318_1_1_9"/>
    <dbReference type="OMA" id="YNGSHAA"/>
    <dbReference type="OrthoDB" id="1757306at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007553">
        <property type="entry name" value="2-thiour_desulf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04463">
        <property type="entry name" value="2-thiour_desulf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="16480" checksum="48E46A4265415B0E" modified="2011-01-11" version="1">MILVSSCLAGMKVRYNGTDSLDVHIQKLVEEKKAMTICPELLGGFMTPREPAEIVGGTGEDVLSGTAKVIEFSGNDVSDMYIRGAYEALHIAREVNASLIVLKENSPSCGSAAIYNGAFENRKIAGNGVTSALLKREGFKVISEEQISEIFLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9P9</accession>
    <name>E3E9P9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_18165</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372418.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3887"/>
    <dbReference type="EnsemblBacteria" id="ADO57839">
        <property type="protein sequence ID" value="ADO57839"/>
        <property type="gene ID" value="PPSC2_18165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3880"/>
    <dbReference type="eggNOG" id="ENOG502ZM2Q">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1276591_0_0_9"/>
    <dbReference type="OMA" id="RDRTAMT"/>
    <dbReference type="OrthoDB" id="1393384at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168272" evidence="2">
        <location>
            <begin position="28"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="211" mass="23240" checksum="7D72D959B1BABB6B" modified="2011-01-11" version="1">MSKGSVFVSVACTILLLAVTIGCTPRADPAAPSEASNEVSKHSAVSTQRAQQSKEELVLSFYKDSSLSDEAKVRHITDHLAGIHWGKMNEISEHLSMEIIEYLYNQRALVPSESFSNVIKGTAGLDGALTEEYDNLMGDLFTRDRTAMTRALANMDKANRVQGIGGIGYALSYRDPKEVKKEIQQWQAGQQLTTAEKDVIRALFAKLDNPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA22</accession>
    <name>E3EA22_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_19670</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372727.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06890"/>
    <dbReference type="EnsemblBacteria" id="ADO58155">
        <property type="protein sequence ID" value="ADO58155"/>
        <property type="gene ID" value="PPSC2_19670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4194"/>
    <dbReference type="eggNOG" id="COG3437">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1184124_0_0_9"/>
    <dbReference type="OMA" id="DYPHIVR"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="5"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="26357" checksum="7E62675E99AEA9F6" modified="2011-01-11" version="1">MTPQNILFVDDSPMVLSLLERTLMQETFTLHTAHTPKEALQVLEKYPIDVVVSDLLMPGLDGITFLRMIKKDYPHIVRIILSGHLHTQSILSAINQVGVFRFLTKPLELDDDTLKKILYEALDQARLNRNSLYANQNVASDLSVFINSILNAPYRPYVLLNDQDIVTAVHIALAELYPVGCSLRHPDGEGIQLTPHSLYIPYEEPESSDPDLYSLDTLTLGHSSLRLIRLSEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAD0</accession>
    <name>E3EAD0_PAEPS</name>
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        <submittedName>
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        </submittedName>
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        <name evidence="10" type="ORF">PPSC2_21565</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO58548"/>
        <property type="gene ID" value="PPSC2_21565"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="643917at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="term" value="P:cell redox homeostasis"/>
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    </dbReference>
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        <property type="term" value="P:glutathione transmembrane transport"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="166"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
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            <begin position="251"/>
            <end position="273"/>
        </location>
    </feature>
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        <location>
            <begin position="24"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="358"/>
            <end position="591"/>
        </location>
    </feature>
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        <location>
            <begin position="392"/>
            <end position="399"/>
        </location>
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        </ligand>
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            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO58548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="598" mass="66016" checksum="C7D26DF53FA4AA44" modified="2011-01-11" version="1">MRATDNSSQGWFLPYLKHYFWAFLAAALLGALSIGCAGALLFTSGHLITRSALKPENILMVYVPIVLVRTFGFSKAVIQYLERLVGHDAALRLVSRMRVRLYRAVEPQALMIRSKFRTGDLLGLLAEDIEQLQNIYLKLVLPALSALLIYAAGILALGWMDGTFALLMALYGGFLLFIAPAISLGTSLAKRRTFKQERSKAYQELTDALFGMSDLVLSGRTGHFLSTFTQRHKRAAMVENSLRRNEWRSHWIAQCLVGGGIVIMTVWAGGLVAQNRIEATWLASFALVTFPLLDAFVRAGEAVVHAPEYQDSLRRLKDSEKDTSALAARSDAGQAADDAADTKEEQATAQRLSHGGDLLLNNVSYCYAATQEWSVRNISLHVPQGGKVALLGRSGAGKSTLLNLIQGALQPDEGSVTVAGVPVFTGGAYSSLFAVLNQQPYLFDTTVANNIRLGRPDASLDEVRAVTEQVGLGALIDSLPEGYDTRMQETGLRFSGGERQRIALARILLQNHPIVLLDEPTVGLDPLTEHELMQTMFRVLKGKTLIWITHHLTGMKHMDEVIFMEQGTISMRGSHDELWRDHARYRNLYKLDHPGLEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAE8</accession>
    <name>E3EAE8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Iron ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yclP</name>
        <name evidence="5" type="ORF">PPSC2_21655</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08850"/>
    <dbReference type="EnsemblBacteria" id="ADO58566">
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        <property type="gene ID" value="PPSC2_21655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4604"/>
    <dbReference type="eggNOG" id="COG4604">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
    <dbReference type="OMA" id="RYAWNGL"/>
    <dbReference type="OrthoDB" id="1048863at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="ABC_transporter-like_CS"/>
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    </dbReference>
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    </dbReference>
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    <feature type="domain" description="ABC transporter" evidence="4">
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            <begin position="2"/>
            <end position="236"/>
        </location>
    </feature>
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            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="28300" checksum="7E8D73D2805464F2" modified="2011-01-11" version="1">MVEVKNVTKRYGNKNVVEQVSVTIPKGTITSFIGPNGAGKSTLLSMISRLTDSDEGEILIDGQAVSLTKSEELARKISILKQTNDVNIRLTVKELVSFGRFPYSKGRLNSEDRKMVEQSMAYMGLEDMKDKHIDLLSGGQRQRAFIAMILAQDTEYILLDEPLNNLDMKHSVQIMKTLRNLVDDLGKTILVVLHDINFASCYSDHIVGMKNGRLLKQGTADEMIDSQVLKDLYDMDIPIQQIGDHKICVYFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAU0</accession>
    <name>E3EAU0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase M56</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">htpX</name>
        <name evidence="3" type="ORF">PPSC2_23765</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11270"/>
    <dbReference type="EnsemblBacteria" id="ADO59004">
        <property type="protein sequence ID" value="ADO59004"/>
        <property type="gene ID" value="PPSC2_23765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5029"/>
    <dbReference type="eggNOG" id="COG0501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084753_0_0_9"/>
    <dbReference type="OMA" id="PWRSIMF"/>
    <dbReference type="OrthoDB" id="1219772at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008756">
        <property type="entry name" value="Peptidase_M56"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05569">
        <property type="entry name" value="Peptidase_M56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="264"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M56" evidence="2">
        <location>
            <begin position="64"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="286" mass="32500" checksum="A9859D3CA238EA7D" modified="2011-01-11" version="1">MWKTRSKLLFTAGALISGFALMQMGMYAGQHVFGWKLNFNVFQICRSLLQHYGIGYMVDALSGLVFVTFGIAGGEAVRQCMATRAAFRRLHRMRDLPLTEALGERYRELGTDRIWVIDYAKPAAFTMGLWKPRIVLSSALLSLLDKHEEEAVIYHEAYHMKHYDPLKTWFLQMCATQLFYLPVLRHITNHYKTAREILADNEAIHRAGSPVGIGSALLKLLSMTPANARLVNSAACSSFAETSINYRISRILDPQQEPIIQMPWRSIMFSGYVLIMLTLMFTLALI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB41</accession>
    <name>E3EB41_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">araB</name>
        <name evidence="3" type="ORF">PPSC2_25185</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373854.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12680"/>
    <dbReference type="EnsemblBacteria" id="ADO59321">
        <property type="protein sequence ID" value="ADO59321"/>
        <property type="gene ID" value="PPSC2_25185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5338"/>
    <dbReference type="eggNOG" id="COG1070">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_509692_0_0_9"/>
    <dbReference type="OMA" id="ANFMRTH"/>
    <dbReference type="OrthoDB" id="1619686at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07778">
        <property type="entry name" value="FGGY_L-RBK_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042029">
        <property type="entry name" value="L-RBK-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FGGY_N" evidence="1">
        <location>
            <begin position="16"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="2">
        <location>
            <begin position="276"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="537" mass="58885" checksum="B11894B1970B4F37" modified="2011-01-11" version="1">MDQDIKQAITKGETSLGIEFGSTRIKAVLIDHRFETIASGSYEWENLLVDGYWTYNLETIITGLQEAYSEMKQEVEQKYGVTLHTVGSIGFSAMMHGYMAFDSKGELLVPFRTWRNATTGAAAKALTDKFQFNIPERWSIAHLYQAILNEEQHVPHIDFMTTLAGYIHWLLTGNKAIGIGDASGIFPIDETTHDYNESMVKQFDELIAAKGYDWKLQDIIPKVHISGEQAGVLTAAGAKILDKSGDLQPGIPLCPPEGDAGTGMVATNSVRKRTGNVSVGTSVFAMIVLEKDLSAVYPEIDLVTTPNGNPVGMVHANNCSSDLNAWLGLFREFYEAMGQKADPNQLFSVLLNKALEADPDGGGLLSYGYLSGENITGIEKGRPLFVRSPESRFNLANFMRTHLFTAFAALKIGMDILTKKENVAIDSILAHGGLFKTPIVGQKIVAAAMDVPVSVMATAGEGGAWGMAILASYMMNKDQQESLEDFLDQKVFRDVEGQEIHPDGSDVKGFETFLERYTQGLAIEQAAVDNLVENWRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBL4</accession>
    <name>E3EBL4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosome hibernation promoting factor</fullName>
            <shortName evidence="2">HPF</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfiA</name>
        <name evidence="2" type="synonym">hpf</name>
        <name evidence="5" type="ORF">PPSC2_22955</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with 100S ribosomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HPF/YfiA ribosome-associated protein family. Long HPF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373370.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10430"/>
    <dbReference type="EnsemblBacteria" id="ADO58832">
        <property type="protein sequence ID" value="ADO58832"/>
        <property type="gene ID" value="PPSC2_22955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4861"/>
    <dbReference type="eggNOG" id="COG1544">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071472_0_3_9"/>
    <dbReference type="OMA" id="RRLKDHH"/>
    <dbReference type="OrthoDB" id="1766263at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00552">
        <property type="entry name" value="RaiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.505.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00839">
        <property type="entry name" value="HPF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034694">
        <property type="entry name" value="HPF_long/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036567">
        <property type="entry name" value="RHF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003489">
        <property type="entry name" value="RHF/RaiA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032528">
        <property type="entry name" value="Ribosom_S30AE_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038416">
        <property type="entry name" value="Ribosom_S30AE_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16321">
        <property type="entry name" value="Ribosom_S30AE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02482">
        <property type="entry name" value="Ribosomal_S30AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69754">
        <property type="entry name" value="SSF69754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00741">
        <property type="entry name" value="yfiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="Ribosom_S30AE_C" evidence="4">
        <location>
            <begin position="128"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="73"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="21323" checksum="9680392A290C99FE" modified="2011-01-11" version="1">MNLTVRGQQIEVTDALKDYVEKKFSRLEKYFDAPPTSDGSVTLSTTRDLHTVEVTIPLPGLVLRAEDESDDMYASIDAVVDKLERQIRKHKTKLNRKFRQEGSLKTLFVEDPADGVAVAEDEDAELDELEVVRTKRFLLKPMDVEEAILQMNMIGHNFFVFANIDNEEVNVVYKRNDGKYGLIERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBN6</accession>
    <name>E3EBN6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Negative regulator of flagellin synthesis</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flgM</name>
        <name evidence="9" type="ORF">PPSC2_23065</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FlgM family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373392.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10550"/>
    <dbReference type="EnsemblBacteria" id="ADO58854">
        <property type="protein sequence ID" value="ADO58854"/>
        <property type="gene ID" value="PPSC2_23065"/>
    </dbReference>
    <dbReference type="GeneID" id="66575460"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4885"/>
    <dbReference type="eggNOG" id="COG2747">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_169011_6_0_9"/>
    <dbReference type="OMA" id="INQFGTQ"/>
    <dbReference type="OrthoDB" id="1979521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035890">
        <property type="entry name" value="Anti-sigma-28_factor_FlgM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007412">
        <property type="entry name" value="FlgM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031316">
        <property type="entry name" value="FlgM_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04316">
        <property type="entry name" value="FlgM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101498">
        <property type="entry name" value="SSF101498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03824">
        <property type="entry name" value="FlgM_jcvi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="9" id="KW-0966">Cell projection</keyword>
    <keyword evidence="9" id="KW-0969">Cilium</keyword>
    <keyword evidence="9" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0678">Repressor</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="FlgM" evidence="8">
        <location>
            <begin position="34"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="10515" checksum="BC82DAE11871E4C3" modified="2011-01-11" version="1">MKINETNRIGAINPYQRNIETGRQEEQKKSRRKDEVSISPEAMEMLNRSSDADRVKKIQELKQQVASGTYRVDADKIAEKLLPFFKQSSES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ7</accession>
    <name>E3EBQ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">acrB1</name>
        <name evidence="2" type="ORF">PPSC2_23155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58875.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025678298.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10640"/>
    <dbReference type="EnsemblBacteria" id="ADO58875">
        <property type="protein sequence ID" value="ADO58875"/>
        <property type="gene ID" value="PPSC2_23155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4904"/>
    <dbReference type="eggNOG" id="COG0841">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002755_1_2_9"/>
    <dbReference type="OrthoDB" id="145346at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="329"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="355"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="381"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="426"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="458"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="533"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="855"/>
            <end position="873"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="880"/>
            <end position="903"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="915"/>
            <end position="935"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="956"/>
            <end position="975"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="987"/>
            <end position="1013"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58875.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1045" mass="112498" checksum="1B2FCDC19549DD3D" modified="2015-05-27" version="2">MSQFSIRRPVTVFMLIVALLIGGGIFALRLPVEYMPDMKLPYAAVVTSIPNATPTEVEELVTKPIEKSLASIENVDTITSESSEGSSMVMIQFNWGVDMNQATLDMRDKVDTIRGSLPDAANSPRVLKVDLNATPVITLAFTGDQDINKLKPIAEDIIEPRLERIAGVAAANMSGGQERLVKITVDQAKLQSYGITLDQIRQALSANNVAGSAGSVYRGNTQIQLRVQGEYKAVSEMGETPIPVGKGSVKLKDIATVEDSVEEVTTISTFNGKPSINISVTKATGGNTLSIANSVKESLESIRKDLPPGTQLEMVTDASKPISDSVHSLIEHAILGLIIAAIVLLLFLNSIRSTIIAAIVIPISFVATFMMMYFTGQTINIISLSGLLLGLGSFVDFAVVIIENIFRQRHEGKSMLQGAIDGSKQVGNAVMASALAQIVVFLPVVFVDGIAGVMFKPLALTVIFSHIAALLVSLMIVPMLGSRWLPTVPDESIYSSGTYKGINPIVWFNIGFEKFKGGYRRVLKWGINHRKSVLIITVLMFVAAGALISMVKAEFIPESDTGEFSVTVKLPNGTVLEETERVVQGIEKEILKVPDLDKMTVTVGSGGLSGYSGAAPSNSAQLSVTLKDGHQATDVIVEGLRKKFDSIPDAEITLASATGLSTGAAVNINLKGDDMDVLRELSDNLVAGVKNIPGTVNVKSSLNAVREEYEITVNRELASQYGLSATQILSAVNTSFNGSVATSYRTGDDQIDVKISLPEQNRHDWSYLNALRITTSQGIDVPLSSVASIDKRAVPDSVTREDQTRQVQISADIDGSGDILSVNQKIDALLKSTHFPEGYSADTGGGQNEQMMESFINLAIAILLSVVLIYMVMAGQFESLLTPFVIMFSIPPTLIGVLIGLVVTGASLSVPAFTGYIMLVGLVVNNAIVMIDYIIQLRKEGEDRDEAIIHGASERLRPILMTTLATVLALIPMAFAKGDGNETQAPMAVVVVFGLSFAALVTLILIPVVYVILDNIIQKRKNRKLKRQEKRQLKKEAKLQKSVHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC21</accession>
    <name>E3EC21_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cyclic-di-AMP phosphodiesterase</fullName>
            <ecNumber evidence="1">3.1.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yybT</name>
        <name evidence="5" type="ORF">PPSC2_25370</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3',3'-c-di-AMP + H2O = 5'-O-phosphonoadenylyl-(3'-&gt;5')-adenosine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:54420"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:71500"/>
            <dbReference type="ChEBI" id="CHEBI:138171"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="2">For phosphodiesterase activity, probably binds 2 Mn(2+) per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GdpP/PdeA phosphodiesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373894.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12865"/>
    <dbReference type="EnsemblBacteria" id="ADO59361">
        <property type="protein sequence ID" value="ADO59361"/>
        <property type="gene ID" value="PPSC2_25370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5377"/>
    <dbReference type="eggNOG" id="COG3887">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018278_0_0_9"/>
    <dbReference type="OMA" id="STCELVT"/>
    <dbReference type="OrthoDB" id="128306at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106409">
        <property type="term" value="F:cyclic-di-AMP phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001667">
        <property type="entry name" value="DDH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038763">
        <property type="entry name" value="DHH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003156">
        <property type="entry name" value="DHHA1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014528">
        <property type="entry name" value="GdpP/PdeA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01368">
        <property type="entry name" value="DHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02272">
        <property type="entry name" value="DHHA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF026583">
        <property type="entry name" value="YybT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64182">
        <property type="entry name" value="SSF64182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0464">Manganese</keyword>
    <keyword evidence="1 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="181"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="352"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="356"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="358"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="425"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="449"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="504"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR026583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR026583-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="662" mass="74519" checksum="CA628554CD30CF1A" modified="2011-01-11" version="1">MPKFLQKRWHGYQTVWAFLLLLVLVICISMYNWELGVIGLLLSFLLGGLMLKTELDFRRELNQYISGLSFRIKRVEGEAISTLPFGIILYSENRTVEWHNRFASEMFEEQSLIGEPLQDLFPQLANALSTKKETKEPARELKVELQHDERHYQFLIVPDERLIYLYEVTELAVLRKQYENERLALGIVMLDNMDEAAQGMDDQQRTALIAKVSSEITSWANQYNIYLRRLSSERYLIMLNHKALQELEQSRFVILDTVREMTADLKVPMTLSIGLSFGAESIKELGELAQSSLDMALGRGGDQAAVKAGQRLSFYGGKSNAVEKRTRVRARVIAHALRDLMQESDRVLIMGHKIPDMDAIGAAIGVWKAAALYNVEAHIVLDKSNPSIDRMMEQVNKDEKLSQALMTPEQSLQVMTEHSLLVVVDTHKASMTIEPRLVQTASRVVVVDHHRRGEEFINDSVLIYLEPYASSACELVTELLQYIHEKVQLTPLEATSLLAGITVDTKHFSLHTGSRTFEAAGFLRRSGADTVMIQRMLKEDLDEYIAKAEIIKHAKMIYGHIAIAVTEPGQKIPQLLIAQVADSLLNMTDVLASFVVSERPDGLVGISARSLGRMNVQVVMERLGGGGHLTNAAVQLDCSLEEAKRRVVDVLAEIDGEEGLFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECC1</accession>
    <name>E3ECC1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gltR1</name>
        <name evidence="3" type="ORF">PPSC2_01385</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368906.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0279"/>
    <dbReference type="EnsemblBacteria" id="ADO54264">
        <property type="protein sequence ID" value="ADO54264"/>
        <property type="gene ID" value="PPSC2_01385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.274"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="VYGPVEH"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="32029" checksum="B9B118A606BC631A" modified="2011-01-11" version="1">MESSDLKIFRAVAREGSITRAAQVLNYVQSNVTSRIQQLEAQLNVPLFRRSNRGMTLTSAGENLLEYAESILTLLDEAEKSTQYSDQPAGPLRLGSIETTAVTHLTTLLTGYYAEYPNVQLSLMTGGTHALVQKVLNYELDGAFVYGPVDDPNIEHVAAFEEELVLISEPGESDMSKLLAKPMLFFDVGCTHRARAESFLSDAGVDAYQIMEFGTLEVILGGVASGLGVSMLPHSSIVKAKKEGSIASHRLPETYRKLEVWFVHRRDSVYSSALSGLLHWMKKDVILNWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECH0</accession>
    <name>E3ECH0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfiF1</name>
        <name evidence="5" type="ORF">PPSC2_01615</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368955.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14380"/>
    <dbReference type="EnsemblBacteria" id="ADO54313">
        <property type="protein sequence ID" value="ADO54313"/>
        <property type="gene ID" value="PPSC2_01615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.323"/>
    <dbReference type="eggNOG" id="COG2169">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="OMA" id="YGIEFRC"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="176"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="32624" checksum="874D567CB9B24F0A" modified="2011-01-11" version="1">MIATPLFAIEQALRMVPFSMSADHVHQAHEIYYLLAGERYYYINQRVYALQKGDLIWISKHDFHRTSNKGSGSHERILINFDEAFVASSTSVTPSSDQSHLLLPEKSFLLRPSAEEQRELEHLFQQMLDEYHQEHAYRHMYLQSLLLQLLIRIRRIQSAAPDTIAPERSEQQQRVYSVIEYLHAHYAEKLSLEQLAGHFYISSTYLCRIFKQTTGFTLVEYLQDVRVQQARAYLKETNWKVTAIAEKTGFDSIAHFGRVFKHFTGRTPLQYRKSHKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECP1</accession>
    <name>E3ECP1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gerAB1</name>
        <name evidence="7" type="ORF">PPSC2_04115</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54813.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599484.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16915"/>
    <dbReference type="EnsemblBacteria" id="ADO54813">
        <property type="protein sequence ID" value="ADO54813"/>
        <property type="gene ID" value="PPSC2_04115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.820"/>
    <dbReference type="eggNOG" id="COG0531">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_1_2_9"/>
    <dbReference type="OrthoDB" id="842200at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="220"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="275"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="307"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="336"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54813.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="369" mass="41601" checksum="6AA3248B7C9453DD" modified="2015-05-27" version="2">MEEKGRISITNIAILVFLSIIGDCVLVYPSLITSISKQDAWISSLLSIPAGLAVLLLFLRVHQLYPDLTFVQLCERILGPWLGALISIWYLFHLMMNSAIYLREVGDFMNSQTYVMTPLPVINLLLILVLMWGMYMGLEPIARTAQILFPFCLAFALFLILCLLPQCDSQQLKPIMEQGIPKIMEGSLFALSYPFGELAFLLMIFPYVNKQPGLKKSVLLSGLAASILLSVLLLVSLLVLGPFVTEHSVYTSYMLSKKINIGNFLQRIESMMSTAWIITTFVKTILHFYAFTLGMTQLLRLNNVRTFLGPNFMILFGLIIVSAPNITYYLDTIVHAWIYWDLTDSIVLPSLLLIVYKLRSKGRHSLGPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED50</accession>
    <name>E3ED50_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">oppA1</name>
        <name evidence="5" type="ORF">PPSC2_02195</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369047.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14960"/>
    <dbReference type="EnsemblBacteria" id="ADO54407">
        <property type="protein sequence ID" value="ADO54407"/>
        <property type="gene ID" value="PPSC2_02195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.416"/>
    <dbReference type="eggNOG" id="COG0747">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017028_8_0_9"/>
    <dbReference type="OMA" id="FYNIDDW"/>
    <dbReference type="OrthoDB" id="162819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="1" id="KW-0564">Palmitate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169104" evidence="3">
        <location>
            <begin position="37"/>
            <end position="606"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="4">
        <location>
            <begin position="125"/>
            <end position="507"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="606" mass="66709" checksum="1D3EEBC912285F28" modified="2011-01-11" version="1">MVKRWKKGILPVLSAILVLSLAACSGSPSASNGAKSSDGTGGSGADSKQVNATALAKAVKNDNPPIKGGIINYALVSDTPFEGILNPVFYDGNPDFEVFQFFYPSLFSIDSNLNIDDKGAATISFSADNKAVTVKIDPKLNWTDGNPVTAEDYAFSYEVIGHKDYEGPRYDSFMTNIVGMEDYHAGKAKTISGIKVLNEKEVTIHFKEPNPSVKSGLWSTPLEKKVFRNIPVKDMAGSDPVRKNPIGYGPFKIKSMVTGESVEFVKNEDYFRGAPKLDGLHLKVVNPNVITEALKSGEIDWASYPTTRYNEASNPKNVQFLGQEELSYSYVGFKLGKFDQAKSLNIMDPNAKLANKSLRQALGYALNNEQVGKQLYHGLRTPATSLIPPAFKGYHDVNAKGIAYDPDKAKKLLDEAGYVDTNGDGYREDPKGKELVLHYAAMSGDATAESLAKFYLQNWKDVGLHVELVDGRLLEFNSFYDRVQKDDPGIDIFGGAWSTGTDVNPSGLYGRGASFNYSRFTSEENDKLLQEGVSVKAFDDNYRKDIYNQWQAYMSEEAPIVPTLFRYSLEAVNNRVANYDITRGKEYDADAFANITLTAEKAEVAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED57</accession>
    <name>E3ED57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glnQ1</name>
        <name evidence="2" type="ORF">PPSC2_02225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369054.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14990"/>
    <dbReference type="EnsemblBacteria" id="ADO54413">
        <property type="protein sequence ID" value="ADO54413"/>
        <property type="gene ID" value="PPSC2_02225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.422"/>
    <dbReference type="eggNOG" id="COG3542">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_088365_0_3_9"/>
    <dbReference type="OMA" id="ERSHWHR"/>
    <dbReference type="OrthoDB" id="1565693at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06121">
        <property type="entry name" value="cupin_YML079wp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009327">
        <property type="entry name" value="Cupin_DUF985"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039935">
        <property type="entry name" value="YML079W-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33387">
        <property type="entry name" value="PTHR33387"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06172">
        <property type="entry name" value="Cupin_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_5" evidence="1">
        <location>
            <begin position="8"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="16831" checksum="52FEB38B72625ED0" modified="2011-01-11" version="1">MTKAISPLVTALGMEPHPEGGWYKEMWKANFQIPKPVLPDVYSGPRFAASSTYFLLHPGEFSEWHVVHSDELWLYHSGSPIELKLGGSGEEPGEETVIIVGADVEAGQHPQALVPGTVWQTARPLGDEPVLVTCVVAPGFHFDDFKLIAKGKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED93</accession>
    <name>E3ED93_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polysaccharide deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-604</name>
        <name evidence="3" type="ORF">PPSC2_02390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369090.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15160"/>
    <dbReference type="EnsemblBacteria" id="ADO54450">
        <property type="protein sequence ID" value="ADO54450"/>
        <property type="gene ID" value="PPSC2_02390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.460"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021264_12_1_9"/>
    <dbReference type="OMA" id="GNHSYHH"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10948">
        <property type="entry name" value="CE4_BsPdaA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014235">
        <property type="entry name" value="Spore_PdaA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10587:SF78">
        <property type="entry name" value="PTHR10587:SF78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02884">
        <property type="entry name" value="spore_pdaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168847" evidence="1">
        <location>
            <begin position="27"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="2">
        <location>
            <begin position="73"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="265" mass="29793" checksum="9144AB2F246C982A" modified="2011-01-11" version="1">MKQIFTLWLCIALMGMSTVMGESASATQAVDGQPYHFGFKKSKGGELPSIAQEGFMHLIERQGGIFLGDTTKKELFLTFDNGYENGYTPKVLDVLKAKKVPAAFFVTGHFVKDQPDLMRRMASEGHIIGNHSWSHPDMSTISSAEIRSELDRVRTASAELTGQKEMKYVRPPRGIFNEKALASCREAGYTSVFWSVAYKDWDTNIQRGTDYAYRQVMQQLHPGAVILLHSVSKDNTEALGSIIDEARKQGYEFKSLDDLKVKHYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDA6</accession>
    <name>E3EDA6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Alpha-amylase</fullName>
            <ecNumber evidence="3">3.2.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nplT</name>
        <name evidence="5" type="ORF">PPSC2_02455</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>Endohydrolysis of (1-&gt;4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1-&gt;4)-alpha-linked D-glucose units.</text>
            <dbReference type="EC" id="3.2.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glycosyl hydrolase 13 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369103.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15190"/>
    <dbReference type="CAZy" id="CBM34">
        <property type="family name" value="Carbohydrate-Binding Module Family 34"/>
    </dbReference>
    <dbReference type="CAZy" id="GH13">
        <property type="family name" value="Glycoside Hydrolase Family 13"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54463">
        <property type="protein sequence ID" value="ADO54463"/>
        <property type="gene ID" value="PPSC2_02455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.473"/>
    <dbReference type="eggNOG" id="COG0366">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006462_6_2_9"/>
    <dbReference type="OMA" id="TPDWVKH"/>
    <dbReference type="OrthoDB" id="148706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004556">
        <property type="term" value="F:alpha-amylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043169">
        <property type="term" value="F:cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02857">
        <property type="entry name" value="E_set_CDase_PDE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006046">
        <property type="entry name" value="Alpha_amylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004185">
        <property type="entry name" value="Glyco_hydro_13_lg-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032091">
        <property type="entry name" value="Malt_amylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045857">
        <property type="entry name" value="O16G_dom_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02903">
        <property type="entry name" value="Alpha-amylase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16657">
        <property type="entry name" value="Malt_amylase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00110">
        <property type="entry name" value="ALPHAAMYLASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="4">
        <location>
            <begin position="135"/>
            <end position="493"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003615"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="600" mass="69363" checksum="FA42CDAA42738807" modified="2011-01-11" version="1">MLLEAIYHHPKRNWAFGYDDETIILRLRAKKNDLNSVHVLTVDKYDWDRTRQLISMSKFATDGRFDYYECTVKPTHRRLKYGFLLEDDEERIWMNEDDFTTEEPQNADSLFQYPFLNPIDILKPPAWVKDAVFYQIFPERFANGDPSISPEGAEDWGGTPQRDNFFGGDLQGILDHLDHLNELGINAIYMTPVFKATTNHKYDTEDYMEVDPHFGDKKILKKLVEACHDRGIRVLLDAVFNHSGRTFKPFVDVLKKGEASPYKDWFHVHSFPLEVVDGTPTYDTFGLEPMMPKLNTEHPEVKEYLLNVAKHWIEEVGIDGWRLDVADEVDHAFWREFRTTVKQANPEAYILGEMWNESSEWLQGDQFDATMNYPFTYAVNDFFVKKVTDAQSFAFAIGRQLARYPQQASEVAFNLLDSHDTPRLLTLCGGDKRLMRLAALFQFTYMGAPCIFYGDEIGLDGDADPGCRQCMEWDTDKQDHELFNFYRELIALRKAHPVLRDQGSITFLEAQPEGASLAYERRSDEEVLLVLLNRSDEDHTFELSIPEQEWQLVFGESRWSVGAKGLHAELLPYGYAVLKATPVRSVNSAKEVDDKMQSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDC0</accession>
    <name>E3EDC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rhamnogalacturonyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_04500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369532.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17400"/>
    <dbReference type="CAZy" id="GH105">
        <property type="family name" value="Glycoside Hydrolase Family 105"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54899">
        <property type="protein sequence ID" value="ADO54899"/>
        <property type="gene ID" value="PPSC2_04500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.902"/>
    <dbReference type="eggNOG" id="COG4225">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043688_0_0_9"/>
    <dbReference type="OMA" id="NTCAMGH"/>
    <dbReference type="OrthoDB" id="982403at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010905">
        <property type="entry name" value="Glyco_hydro_88"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07470">
        <property type="entry name" value="Glyco_hydro_88"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="339" mass="38978" checksum="23AC3191E8B916DD" modified="2011-01-11" version="1">MLQLTYDKEEILRVIDKVVRKTMAMDLTWDWPCGVAYYGVSRAYTQTGNKEYLNMLAQWADEYIELGLPHWTVNTCAMGHMLITLYEETGDQKYWDIVMSKVDYIQNHALRFGDHVLQHTVSVANDFPEQAWADTLFMAAFFLLRVGTKLKDEKMIQDALNQYYWHIKYLQDPSSGFWYHGYNNVKQDHMSGFFWGRANAWGAYTMSQVKIHLKDWYLYPPCMDVECSLRDQLAALKGVQTENGLWRTVLDDEESYEEVSASCGIAAAMINNGNPLHTKYVQKALKGILNHISEDGRVLGVSGGTAVMKDREGYRNIPKDWIQGWGQGLALAFLSDMLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDI5</accession>
    <name>E3EDI5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fe-S_biosyn domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_04810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369597.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17705"/>
    <dbReference type="EnsemblBacteria" id="ADO54964">
        <property type="protein sequence ID" value="ADO54964"/>
        <property type="gene ID" value="PPSC2_04810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.967"/>
    <dbReference type="eggNOG" id="ENOG503439D">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_159138_0_0_9"/>
    <dbReference type="OMA" id="FYDTEDC"/>
    <dbReference type="OrthoDB" id="1832496at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000361">
        <property type="entry name" value="FeS_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01521">
        <property type="entry name" value="Fe-S_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="SSF89360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-S_biosyn" evidence="1">
        <location>
            <begin position="5"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12613" checksum="85678B0041BC6DD5" modified="2011-01-11" version="1">MSIHLELDSLSVERLAMVLSGRPGMFKLFYDTEDCGCNGVLTILVIDAPNATDTAIQSDSYSFWVDRQQEQQFDSQMRLEADPSYPSFKVSSDAGILSSNVRIQDRRVNSSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDI8</accession>
    <name>E3EDI8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_04825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369600.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54967">
        <property type="protein sequence ID" value="ADO54967"/>
        <property type="gene ID" value="PPSC2_04825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.970"/>
    <dbReference type="eggNOG" id="ENOG5031ZU8">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2634794_0_0_9"/>
    <dbReference type="OMA" id="QKKRSEP"/>
    <dbReference type="OrthoDB" id="2008679at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8745" checksum="5A3401D66331713D" modified="2011-01-11" version="1">MSSLTTESMIELVTNVGFPAALSLILLKYILVTLNRRLEQLDRSVKQMSRSLEEIEAKQKKRSEPTLPANTDKLRAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDV7</accession>
    <name>E3EDV7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Pur operon repressor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">purR9</name>
        <name evidence="7" type="ORF">PPSC2_00175</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368673.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13190"/>
    <dbReference type="EnsemblBacteria" id="ADO54023">
        <property type="protein sequence ID" value="ADO54023"/>
        <property type="gene ID" value="PPSC2_00175"/>
    </dbReference>
    <dbReference type="GeneID" id="66574929"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.34"/>
    <dbReference type="eggNOG" id="COG0503">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_088227_0_0_9"/>
    <dbReference type="OMA" id="YMLERPR"/>
    <dbReference type="OrthoDB" id="1231912at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045982">
        <property type="term" value="P:negative regulation of purine nucleobase metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015265">
        <property type="entry name" value="PuR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010078">
        <property type="entry name" value="PurR_Bsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43864:SF2">
        <property type="entry name" value="PTHR43864:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09182">
        <property type="entry name" value="PuR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01743">
        <property type="entry name" value="purR_Bsub"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0678">Repressor</keyword>
    <feature type="domain" description="PuR_N" evidence="6">
        <location>
            <begin position="5"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="Pribosyltran" evidence="5">
        <location>
            <begin position="108"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF09182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="30394" checksum="1D1D4D0615CA40A6" modified="2011-01-11" version="1">MKKLKRSSRLVEMTQFLLSRPHTLVPLTHFADRYGAAKSSISEDLAIIKEVFEDEGTGELLTLAGAAGGVKLIPRLSKQHALAFANDLCAQLEQPDRILPGGYLYLSDLLGQPAMMNEAGKIFATAFADRQIDVVMTVETKGIPLAYATGAQLNLPVVLVRRDHQVTEGSAVSINYVSGSQKSLHTMSLSRRAMREKSRVLIVDDFMKAGGTIQGMVDLLAEFDAEVAGVGVLVESGEVENEERLLHDYISLANLTAVDSRSKQITVKLGNYFDELTGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDX0</accession>
    <name>E3EDX0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hupA</name>
        <name evidence="5" type="ORF">PPSC2_00235</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007428028.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13250"/>
    <dbReference type="EnsemblBacteria" id="ADO54036">
        <property type="protein sequence ID" value="ADO54036"/>
        <property type="gene ID" value="PPSC2_00235"/>
    </dbReference>
    <dbReference type="GeneID" id="66574918"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.46"/>
    <dbReference type="eggNOG" id="COG0776">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105066_3_1_9"/>
    <dbReference type="OMA" id="RDRVNIY"/>
    <dbReference type="OrthoDB" id="1847472at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030261">
        <property type="term" value="P:chromosome condensation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020816">
        <property type="entry name" value="Histone-like_DNA-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01727">
        <property type="entry name" value="DNABINDINGHU"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00045">
        <property type="entry name" value="HISTONE_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0226">DNA condensation</keyword>
    <keyword evidence="3 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="9604" checksum="7A495866736F51B5" modified="2011-01-11" version="1">MNKTDLINNISSKSGLSKRDVEAVLNGVLGEITDALASGDKVQLIGFGTFETRKRSSRTGRNPQTGNTIEIPESTVPAFKAGNKLKEAVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE21</accession>
    <name>E3EE21_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykvN</name>
        <name evidence="2" type="ORF">PPSC2_02720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54501.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_019685981.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0517"/>
    <dbReference type="EnsemblBacteria" id="ADO54501">
        <property type="protein sequence ID" value="ADO54501"/>
        <property type="gene ID" value="PPSC2_02720"/>
    </dbReference>
    <dbReference type="GeneID" id="66574431"/>
    <dbReference type="KEGG" id="ppm:PPSC2_02720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.510"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_1_9"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="6"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54501.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="13282" checksum="C0AE5A96197DA705" modified="2015-05-27" version="2">MKTFFCELEVTLEVIGGKWKGLVLYYLIKGPKRTGELKRLVHNISQKMLIQTLRELETDGLIRRKMYNQVPPKVEYSTTELGQSLEPILRSLCDWGGNYAEQSFAPGEIEILYLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEG2</accession>
    <name>E3EEG2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370044.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19860"/>
    <dbReference type="EnsemblBacteria" id="ADO55413">
        <property type="protein sequence ID" value="ADO55413"/>
        <property type="gene ID" value="PPSC2_06890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1420"/>
    <dbReference type="eggNOG" id="ENOG5032WVC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074221_1_0_9"/>
    <dbReference type="OrthoDB" id="1312097at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="21912" checksum="32DF287A81120DB4" modified="2011-01-11" version="1">MDVAYIIDLLRKDDVTLTPGLSTQEITEVEDRYDIHFPPDLRELLMNVLPIGKSFIPWRDTSPQRMGVIWERLNWPLEGMIFDVEQNIFWPSEWGERPTDLQEAIDTCKREFLHVPKLIPIYGHRYIPEQPCEEGNPVFSVYQTDIIVYGESLQEYFKQEFGEKTYEQIDFEAVKTVRFWSDLCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF78</accession>
    <name>E3EF78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-748</name>
        <name evidence="2" type="ORF">PPSC2_03155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369236.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0615"/>
    <dbReference type="EnsemblBacteria" id="ADO54598">
        <property type="protein sequence ID" value="ADO54598"/>
        <property type="gene ID" value="PPSC2_03155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.604"/>
    <dbReference type="eggNOG" id="ENOG503437D">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_184464_0_0_9"/>
    <dbReference type="OMA" id="KITHPRR"/>
    <dbReference type="OrthoDB" id="1969419at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10849" checksum="DD3B20D31F642C0E" modified="2011-01-11" version="1">MEHKGKDLLPLTGEKVEVDGIYVDEDGHEQHLHRGQHFPADVILGTSEWKMTEYAFDNHHEGRTDERLIPKEDDKNKMGKITHPRRHLKTGDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFP4</accession>
    <name>E3EFP4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">yvrG</name>
        <name evidence="11" type="ORF">PPSC2_07450</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370162.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20425"/>
    <dbReference type="EnsemblBacteria" id="ADO55535">
        <property type="protein sequence ID" value="ADO55535"/>
        <property type="gene ID" value="PPSC2_07450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1540"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_3_9"/>
    <dbReference type="OMA" id="IHNPPGT"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="151"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="117"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="356" mass="40596" checksum="A50562B8F9EB9066" modified="2011-01-11" version="1">MNSLVKISFRFIKVTLCFALAYVLCFLICTVIYIFIKSTFGTSHNMNIDLFWIGLGIVQSIVFIAVYGWYIGKPLVYVIKWIGNIATGEFQAPLSELELPERKKNQSNNYKPPYQLYKEVFEQMNILSAQLRSNEEERMEIEKRKQQWVAGVSHDLKTPLSYIEGYAAMLTAQEYDWSEEEKRSFSMAISEKVTEMKQLIQDLNASMQLKEGALPIQLKKEDIVEFLRNTVIDIANHPSAEQYEFSFMSLEAVCVVPFDSKLLGRALKNFLMNAIIHNPPGTHVSMEVNKESDKLHISIEDDGIGMNPTEFIQMTPSKEHGIPIAKSFIEAHNGTLHILPGSQEGTRIEITLPLNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFY1</accession>
    <name>E3EFY1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA(Met) cytidine acetate ligase</fullName>
            <ecNumber evidence="1">6.3.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylbM</name>
        <name evidence="1" type="synonym">tmcAL</name>
        <name evidence="2" type="ORF">PPSC2_09640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac-AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetate + ATP + cytidine(34) in elongator tRNA(Met) = AMP + diphosphate + N(4)-acetylcytidine(34) in elongator tRNA(Met)</text>
            <dbReference type="Rhea" id="RHEA:58144"/>
            <dbReference type="Rhea" id="RHEA-COMP:10693"/>
            <dbReference type="Rhea" id="RHEA-COMP:10694"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:74900"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TmcAL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370631.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22105"/>
    <dbReference type="EnsemblBacteria" id="ADO56015">
        <property type="protein sequence ID" value="ADO56015"/>
        <property type="gene ID" value="PPSC2_09640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2032"/>
    <dbReference type="eggNOG" id="COG1323">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038915_0_2_9"/>
    <dbReference type="OMA" id="WARTKMA"/>
    <dbReference type="OrthoDB" id="1547014at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01539">
        <property type="entry name" value="TmcAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008513">
        <property type="entry name" value="tRNA(Met)_cyd_acetate_ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37825">
        <property type="entry name" value="PTHR37825"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05636">
        <property type="entry name" value="HIGH_NTase1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="1" id="KW-0820">tRNA-binding</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="7"/>
            <end position="20"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="44294" checksum="BFB5E24F90CB809F" modified="2011-01-11" version="1">MKTLGIIVEYNPLHNGHVHHWKESLRITGAQRTVAVMSGPFLQRGEPAITDKWSRTEMALAMGVDLVLELPVAYAVQPAEWFARGAVTLLCATGIVDALCFGSESGDIAPLHTLARVLAAEPAELKAGIAQRLSKGASYPAAYAGAAAALAAEGADGAALAALMQQPNNTLGLHYLIALERLGSTIKPFTVARTGSGYHEAVAPEDGVIASATAIRRLLLDGGPEAASPYVPAATLEILQREWQEERAPLHWEAFCQPLLNALITRSPQQLAELHEVTEGLEHRLQQSLYTLPQPSVEALFAAVKTKRYTRTKLQRMCTHILLNHAKADMTPAELAKGPGYIRVLGFNRAGRKLLAQMKDTAALPVWVKPSAGSHAHLDWDTAAAAIHAAGMPRPAIRHMYADYLRPPVMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG19</accession>
    <name>E3EG19_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">smf</name>
        <name evidence="3" type="ORF">PPSC2_09815</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DprA/Smf family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56052.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885927.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22285"/>
    <dbReference type="EnsemblBacteria" id="ADO56052">
        <property type="protein sequence ID" value="ADO56052"/>
        <property type="gene ID" value="PPSC2_09815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2069"/>
    <dbReference type="eggNOG" id="COG0758">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029601_1_1_9"/>
    <dbReference type="OrthoDB" id="1881437at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009294">
        <property type="term" value="P:DNA-mediated transformation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003488">
        <property type="entry name" value="DprA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041614">
        <property type="entry name" value="DprA_WH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43022">
        <property type="entry name" value="PTHR43022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02481">
        <property type="entry name" value="DNA_processg_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17782">
        <property type="entry name" value="DprA_WH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00732">
        <property type="entry name" value="dprA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DprA_WH" evidence="2">
        <location>
            <begin position="311"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56052.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="372" mass="41224" checksum="2F2E05D736E3FDF4" modified="2015-05-27" version="2">MEERWLLLGLHELEGIGRRTIQRIWSSDYRLHELLHFSEQKWIEIGLSPTQARIAAQCYDEEWVHERYQRIQSSDIGTVTYVDKDYPLLMKETVDPPWVMYTKGDKSLLHTCSVAMVGTRVPTAYGRRAAEILTEELCNAGITVVSGLARGIDSICHETALRQGGNTIGVLGTAIDQIYPPQNASLFAEMASKGLIVSEYPPGTRSHPGMFPQRNRIIAGLTKGTLVVEADARSGSLITADAALEANRDVFAVPGPITSPKSKGTLNLIKQGAKTVTEASDIIEEYEADLRTRQVSSYNREQSLNLKKVSKASESETSEEKRVVLLLEQGTMTLDELLDATAWDFGLLHAVLLSLIIKKRIAQLAGTKYKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG39</accession>
    <name>E3EG39_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar motor switch protein FliM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fliM</name>
        <name evidence="11" type="ORF">PPSC2_09915</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FliM family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370685.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22385"/>
    <dbReference type="EnsemblBacteria" id="ADO56072">
        <property type="protein sequence ID" value="ADO56072"/>
        <property type="gene ID" value="PPSC2_09915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2089"/>
    <dbReference type="eggNOG" id="COG1868">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052646_0_0_9"/>
    <dbReference type="OMA" id="NPQFTQI"/>
    <dbReference type="OrthoDB" id="1748746at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17908">
        <property type="entry name" value="FliM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028976">
        <property type="entry name" value="CheC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001689">
        <property type="entry name" value="Flag_FliM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001543">
        <property type="entry name" value="FliN-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036429">
        <property type="entry name" value="SpoA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02154">
        <property type="entry name" value="FliM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01052">
        <property type="entry name" value="FliMN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002888">
        <property type="entry name" value="FliM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00955">
        <property type="entry name" value="FLGMOTORFLIM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101801">
        <property type="entry name" value="SSF101801"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103039">
        <property type="entry name" value="SSF103039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01397">
        <property type="entry name" value="fliM_switch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="11" id="KW-0969">Cilium</keyword>
    <keyword evidence="7" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="11" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FliMN_C" evidence="10">
        <location>
            <begin position="254"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="332" mass="37420" checksum="89455EAD69B925DF" modified="2011-01-11" version="1">MVDVLSQGEIDALLAALSSGEMDAEELKKEETQKKVRAYDFKRALRFSKDHIRSLTRIHENFARYLTTYFSAQLRTFVQINVVQVEQLPYDEFIRSIPKMTILNIFEAEPLEGRMVLEVHPNVAYAMLDRLLGGTGSAPTKVTALTEIETTIMERIFSRTFDSLQEAWKTVLDIEPRLEAMETNPQFMQIVSPNETIALISLSTKIGDTTGMINLCIPHVVLEPIMARLSTHQWFTSEKKSRAPEEIDALRLRVTKAELPIIAELGESRINVAEFLGLSVGDVISLNKPVKEGLSIRVGEKLKFMGSPGMVRDRVAVQIDEIVNEGVEEIDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG63</accession>
    <name>E3EG63_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Major facilitator transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">yihO1</name>
        <name evidence="11" type="ORF">PPSC2_10730</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
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        <property type="entry name" value="Na/Gal_symport"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
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    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="95"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="127"/>
            <end position="149"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="9">
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            <end position="215"/>
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            <end position="271"/>
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    </feature>
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        </location>
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    <feature type="transmembrane region" description="Helical" evidence="9">
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            <end position="439"/>
        </location>
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            <begin position="1"/>
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        </location>
    </feature>
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        </source>
    </evidence>
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        <source>
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    </evidence>
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        <source>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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    </evidence>
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    </evidence>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="50778" checksum="3781441F4B8495CB" modified="2011-01-11" version="1">MGVPIVQESVQTDNKTGEHISLKEKISYGMGDFGNGFMFDLGQLYLLKFFTDVAGVSAGAAAGIFLVSKLFAAVCDPIVGSFVDYRKHIGTRGKFRPFLIVGSVILAILTILTFISPNISPTGKLIYAYASYMIWGIGYSIVNIPYGSLGAAITQDTQQRASLSSFRQAGSLGALFVTSVVVMPLILLFPNHHVGYPVVMGIMSFIGVIAFIICYRGTKERIISQSGPKEKLSLGVIVHTFTNNKPLLVLVLMTIFTISAYNIKSALLIYFAEYNLGHVELMAYMNFIIIGSSLLGVLFLPKLVRRFGKRKTAILGMLVSVIADSINFLMPSNVYIFTILASISFIGISIPNGVTWAFVSDIIDYGEWSSGERKEGITYSLFNFSRKLAQSLSGFLSGIGLALVGYVPNVVQSSGTLLGIKALLCLYPAVALALAMLVIGKMYKLTDSRHAEMVQELQRRHADNRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGG7</accession>
    <name>E3EGG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">TgtB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">tgtB</name>
        <name evidence="1" type="ORF">PPSC2_01060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="gene ID" value="PPSC2_01060"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="2127647at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="31643" checksum="38354C46895285EE" modified="2011-01-11" version="1">MQFSIDEVRRLNRNNDTVFFSVNTLHKLRLWNFPVINTATFNQNVVTVSYEEMISQTTDRIQVSNPVFLYPLPEGEEGDEYVTLFVSSKHYLAEYCEKVTLSYDFINRIVERKDKLSSNSTKLLTLHSFQGILKMFNDVKIKNEEWPNYCSDFIQYLKCLIKEYPFLGYLPIAERKDFREKSVADMSFAWEFYIKFFVDEWSSKDYVVKIPNLSKPFHHMSWTGDFFQRDNPFWQSYLSVNGKFRFHRAVRESIYQIWKEWIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGY3</accession>
    <name>E3EGY3_PAEPS</name>
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        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ompR</name>
        <name evidence="5" type="ORF">PPSC2_07490</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1566"/>
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        <property type="protein sequence ID" value="ADO55543"/>
        <property type="gene ID" value="PPSC2_07490"/>
    </dbReference>
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    </dbReference>
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    <dbReference type="OrthoDB" id="1103684at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
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        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
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        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="108"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="108"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="26191" checksum="AF51688F99683DB4" modified="2011-01-11" version="1">MKQKFIAISSFGKIRHFFEALSTPENVQIIFYNSLNEALPWIDEQCIGVALNQDHLTLEDLSYWHTIKEKCSVPFIFLSYHRDDQRQLDLLKQLFSIASSEYQIQREHEAISLSPNVIFDPAGKVIWKQGHEYMLTMMEFRLLMYLLTAKECASTIDHIIDRVWGVDAYTTSNTVYVHIRKLREKIEDDPSHPKILVTCHGIGYRLNIFPKNLEVASCEETTALH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH27</accession>
    <name>E3EH27_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mrr</name>
        <name evidence="2" type="ORF">PPSC2_07680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370214.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1610"/>
    <dbReference type="EnsemblBacteria" id="ADO55587">
        <property type="protein sequence ID" value="ADO55587"/>
        <property type="gene ID" value="PPSC2_07680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1592"/>
    <dbReference type="eggNOG" id="COG1787">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_101688_0_1_9"/>
    <dbReference type="OMA" id="YSSMRFY"/>
    <dbReference type="OrthoDB" id="1999861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007560">
        <property type="entry name" value="Restrct_endonuc_IV_Mrr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04471">
        <property type="entry name" value="Mrr_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mrr_cat" evidence="1">
        <location>
            <begin position="52"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="24868" checksum="5589CD0BBE3DEF0E" modified="2011-01-11" version="1">MYIFIVVGVIAVLLALALLRFLKKPKVQERYKVTQDIDPYKIGINEIDRMEDGKDFEMYLFRLFLCLGYSDAYKTQDSRDFGTDLVFTDREGYRNVIQAKRYALSNPVGLSAVQEVYSSMRFYRAKKSIVITSSKYTPSCEQLASYNGVKLLDRNDLIRMIELFKEQQHSKVKDIIEAEPYLSLDSWDDYRNNSKVIKKDRKTEKYQKQTVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH77</accession>
    <name>E3EH77_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">ATP-dependent 6-phosphofructokinase</fullName>
            <shortName evidence="15">ATP-PFK</shortName>
            <shortName evidence="15">Phosphofructokinase</shortName>
            <ecNumber evidence="15">2.7.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">Phosphohexokinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">pfkA</name>
        <name evidence="17" type="synonym">pfk</name>
        <name evidence="17" type="ORF">PPSC2_08950</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 15">Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>ATP + beta-D-fructose 6-phosphate = ADP + beta-D-fructose 1,6-bisphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16109"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="15">Allosterically activated by ADP and other diphosphonucleosides, and allosterically inhibited by phosphoenolpyruvate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5 15">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 15">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="15">Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Prokaryotic clade 'B1' sub-subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.11" evidence="15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370486.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21415"/>
    <dbReference type="EnsemblBacteria" id="ADO55868">
        <property type="protein sequence ID" value="ADO55868"/>
        <property type="gene ID" value="PPSC2_08950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1886"/>
    <dbReference type="eggNOG" id="COG0205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020655_0_1_9"/>
    <dbReference type="OMA" id="KFAVICV"/>
    <dbReference type="OrthoDB" id="1421302at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003872">
        <property type="term" value="F:6-phosphofructokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006002">
        <property type="term" value="P:fructose 6-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00339">
        <property type="entry name" value="Phosphofructokinase_I_B1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022953">
        <property type="entry name" value="ATP_PFK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012003">
        <property type="entry name" value="ATP_PFK_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012828">
        <property type="entry name" value="PFKA_ATP_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015912">
        <property type="entry name" value="Phosphofructokinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000023">
        <property type="entry name" value="Phosphofructokinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035966">
        <property type="entry name" value="PKF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00365">
        <property type="entry name" value="PFK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000532">
        <property type="entry name" value="ATP_PFK_prok"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00476">
        <property type="entry name" value="PHFRCTKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53784">
        <property type="entry name" value="SSF53784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02482">
        <property type="entry name" value="PFKA_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00433">
        <property type="entry name" value="PHOSPHOFRUCTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 15" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="12 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 15" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="14 15" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="11 15 17" id="KW-0418">Kinase</keyword>
    <keyword evidence="13 15" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15 17" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PFK" evidence="16">
        <location>
            <begin position="6"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="ADP binding; allosteric activator; shared with dimeric partner" evidence="15">
        <location>
            <begin position="24"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="15">
        <location>
            <begin position="128"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="15">
        <location>
            <begin position="172"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="ADP binding; allosteric activator" evidence="15">
        <location>
            <begin position="188"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="region of interest" description="ADP binding; allosteric activator" evidence="15">
        <location>
            <begin position="216"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="15">
        <location>
            <begin position="253"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <begin position="75"/>
            <end position="76"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <begin position="105"/>
            <end position="108"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>ADP</name>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <note>allosteric activator</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>substrate</name>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>substrate</name>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO55868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="34907" checksum="A1187A0FFFF22F1F" modified="2011-01-11" version="1">MTAVKKIAVLTSGGDSQGMNAAVRAVVRSGLYFGLEVFGIQRGYQGLLNDDIFPMDLRSVGDIIQRGGTVLQSARCLEFTTEEGQKRGAEILRNRGIDGVVVIGGDGSYQGANKLTKQGIKTMCLPGTIDNDISFTDYTIGFDTAVSIVVDAINKLRDTMSSHERSSIVEVMGRHCGDIALHAGLASGAETILVPEVEFDLNEVSDRMKQNFKHGKRHSIIIVAEGVGKGETVAKVIQENCPDYEPRVTVLGHIQRGGTPTAFDRNLASRLGDFAVRQLIEGVSDKACGTIDGKLVATDIDKVVNTKKDFNMELYELALRLSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHD2</accession>
    <name>E3EHD2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Integron gene cassette protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_09210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370540.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1951"/>
    <dbReference type="EnsemblBacteria" id="ADO55923">
        <property type="protein sequence ID" value="ADO55923"/>
        <property type="gene ID" value="PPSC2_09210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1941"/>
    <dbReference type="eggNOG" id="ENOG50330W0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1871809_0_0_9"/>
    <dbReference type="OMA" id="YYFNMIE"/>
    <dbReference type="OrthoDB" id="1693463at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="14689" checksum="2DBD38719ED6969C" modified="2011-01-11" version="1">MPHIKAIQTPLGELHGRDAVYLDQVHMNYAKKELVLKGEINGGLASEAVDVFVPYELIFTGVYYFNMIELDVALDMPEQKYTQGSSFDELTDTPLLATIASARGKNLKHFLLKTYDDVLEIACRDYKMTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHJ0</accession>
    <name>E3EHJ0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Putative competence-damage inducible protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 3" type="primary">cinA</name>
        <name evidence="3" type="ORF">PPSC2_10240</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CinA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370752.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22710"/>
    <dbReference type="EnsemblBacteria" id="ADO56143">
        <property type="protein sequence ID" value="ADO56143"/>
        <property type="gene ID" value="PPSC2_10240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2158"/>
    <dbReference type="eggNOG" id="COG1058">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1546">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030805_9_3_9"/>
    <dbReference type="OMA" id="PGVPYEM"/>
    <dbReference type="OrthoDB" id="1834406at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00885">
        <property type="entry name" value="cinA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00226_B">
        <property type="entry name" value="CinA_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036653">
        <property type="entry name" value="CinA-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008136">
        <property type="entry name" value="CinA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041424">
        <property type="entry name" value="CinA_KH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008135">
        <property type="entry name" value="Competence-induced_CinA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02464">
        <property type="entry name" value="CinA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18146">
        <property type="entry name" value="CinA_KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00994">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006728">
        <property type="entry name" value="CinA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142433">
        <property type="entry name" value="SSF142433"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00200">
        <property type="entry name" value="cinA_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00177">
        <property type="entry name" value="molyb_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00199">
        <property type="entry name" value="PncC_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="2">
        <location>
            <begin position="4"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="422" mass="46426" checksum="DA963CE50A4088D0" modified="2011-01-11" version="1">MKAEIIAVGTELLLGQIVNTNAQYLSQELATIGIDVYFQTVVGDNMDRLQEAVRLAQKRADIILFSGGLGPTQDDLTKDAIAVVLGRKLQIDRLAMDKLDQFFRNRGVEMTENNRRQALSIEGATPLENETGLAIGDAIAQDGKFYVVLPGPPKELKPMFANHAKPWLLQQALSGEEMPIYSKMLKFAGIGESALETRLLDLIESQTDPTIAPYAKEGEVTIRISTKAASESEALIKLTATEVQIQQRLSEYMYASEDVTLEKVIVDLMAKRGLTVSAAESCTGGMLMEHITSIPGSAVMFQGGIVCYSNEMKMKLLNVPYDYLEGDHAPGAVSKEVALVLAEQARMIMDSDFGLSVTGVAGPGYSERKPVGLVYIGIAERDKETEVYELNLSGNRETIRLRSVKAILYRLWRRLVENEKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHU1</accession>
    <name>E3EHU1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Daunorubicin resistance protein DrrC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">drrC</name>
        <name evidence="5" type="ORF">PPSC2_11185</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370958.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2381"/>
    <dbReference type="EnsemblBacteria" id="ADO56353">
        <property type="protein sequence ID" value="ADO56353"/>
        <property type="gene ID" value="PPSC2_11185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2368"/>
    <dbReference type="eggNOG" id="COG0178">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001370_2_1_9"/>
    <dbReference type="OMA" id="VCFEGTV"/>
    <dbReference type="OrthoDB" id="152379at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="450"/>
            <end position="747"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="484"/>
            <end position="491"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="753" mass="83656" checksum="62D002535CFB6061" modified="2011-01-11" version="1">MSDNCIRVLGARERNLKNIDVVISKKEITVFTGVSGSGKSSLVFDTIAAESQRQLNETYTSFIRHRMPHYGKPDVDTIENLSVAFIINQKRLGGNARSTVGTVTDIYSLLRLLFSRNGTPFVGYSDVFSFNNLAGMCSQCQGLGKVETIDIERLLDKNKSLNEGAVCFPTFEPGGWRLTRYIHSGFFDNDKKIKDYSEAELEMLLYADGIKVKNPSPEWHKTSLYEGLIPRIERSFLKKEEGEKTRYSKQIERFVTKQTCSHCNGTRLSDKVLSCKVNGKNIAECAEMQVSELLEFIETIHTPVSVTIVSELANRLQQMVSIGLGYLSLNRETSTLSGGESQRIKMVCQLGSSLTDLTYIFDEPSIGLHPHDISKINDLMKLLRDKGNTVLIVEHDPDLIKIADHIIDMGPSAGIYGGEIVYQGDLQGLKESGTLTGKYLSHQPEYKLNTRTPKGWLSIENATLHNLKNISVQIPKGVMTVVTGVAGSGKSTLINQVLPQFYPKTVFIDQKGIQASKRSNIATFMGIFDRIRKLFAKKNGVSASLFSFNSQGACPVCKGLGVTYTDLAFMDTIVTVCEECQGDRFTDEVLQYKLRGKNISEVLKLTVAEALEFFQEKEISRVLNMLSDVGITYIPLGQPLNTLSGGELQRIKLASELENDGQIYVLDEPSTGLHMADIKQLIGVMNRLVEQNSTLIVIEHNLDIICQADWIIDLGPFAGQNGGEIIFTGLPEDLVKCRHSLTGSYLKEYIGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ2</accession>
    <name>E3EHZ2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">Methionine aminopeptidase</fullName>
            <shortName evidence="2">MAP</shortName>
            <shortName evidence="2">MetAP</shortName>
            <ecNumber evidence="2 3">3.4.11.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Peptidase M</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">map</name>
        <name evidence="5" type="synonym">map5</name>
        <name evidence="5" type="ORF">PPSC2_11805</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 2">Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>Release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.</text>
            <dbReference type="EC" id="3.4.11.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="2 3">Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.18" evidence="2 3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371089.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24130"/>
    <dbReference type="EnsemblBacteria" id="ADO56484">
        <property type="protein sequence ID" value="ADO56484"/>
        <property type="gene ID" value="PPSC2_11805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2499"/>
    <dbReference type="eggNOG" id="COG0024">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015857_0_1_9"/>
    <dbReference type="OMA" id="SKMYVMP"/>
    <dbReference type="OrthoDB" id="1285136at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070084">
        <property type="term" value="P:protein initiator methionine removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01086">
        <property type="entry name" value="MetAP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01974">
        <property type="entry name" value="MetAP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001714">
        <property type="entry name" value="Pept_M24_MAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002467">
        <property type="entry name" value="Pept_M24A_MAP1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00599">
        <property type="entry name" value="MAPEPTIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00500">
        <property type="entry name" value="met_pdase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="4">
        <location>
            <begin position="11"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="27222" checksum="42A9D766F5AD3842" modified="2011-01-11" version="1">MIILKSPREIEEMKPASQIVADCYREVVKLIEPGITTREINDFVARHITKLGGKQFTKGYNGFPAETCISVNDVVAHGIPSNQVLMDGDLLKLDIVVEYGGWFGDSCWCYAVGNIRPEAQKLMRVTKECLDLGIARALPGGRLGDITSAIQQHAEANGFSVVRDLLAHGIGRSLHEEPSYEHIGVAGKGTRLKEGMVFTIEPMINEGTFRITIDDDQWTARTADGKLSAQYEHTIAVTQDGPLILTAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ8</accession>
    <name>E3EHZ8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">barA</name>
        <name evidence="12" type="ORF">PPSC2_11835</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371095.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24160"/>
    <dbReference type="EnsemblBacteria" id="ADO56490">
        <property type="protein sequence ID" value="ADO56490"/>
        <property type="gene ID" value="PPSC2_11835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2506"/>
    <dbReference type="eggNOG" id="COG4251">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_104_14_9"/>
    <dbReference type="OMA" id="KWIQEYQ"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="5"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="27"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="50"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="227"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="11">
        <location>
            <begin position="463"/>
            <end position="581"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="11">
        <location>
            <begin position="614"/>
            <end position="730"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="8">
        <location>
            <position position="513"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="8">
        <location>
            <position position="663"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="853" mass="97481" checksum="7A6FA6803699A3F6" modified="2011-01-11" version="1">MVRDLLLYTIVILLLVLIFQRQLIRQAITGVFYGLAGILFFYFGISDRTLLTCVLEIGIGLLFMTLFGQALTPTNYTYGQRLLDKNHDLLTLLRVQPGFTFRLEKRGDEFYYMLLDGELLERMGLNLQVNFNKWEHVKRIGDILELSSETLEQLTEYYKQAWFGNRTVFELEFWEYSALITLHPVRDDGFTRYVIGHVLDITEYKASEQKRKEMSESNHAKSIFLAHMSHEIRTPLNGIIGLSKLLSKTQLTDVQKDYLHKLLASSRTLIDILNNVLDFSKIEACKLELERVEFELENMLRHLADTIGTLLEHKEIEVVFITDPELPKSFKGDPLRMEQVLLNLMTNAIKFTDQGHVLLQVKMVGQQDGRVSVTFMVEDTGIGISKTGMDKLFVPFTQVSTSTHRYGGSGLGLAISKQLAEAMGGSVEVKSCLGEYSQFYFNVELDIGDLNVRSTQLEKPNGKALIIAQHKLVSHSLNELLQDLGLQTLTVSSFQEYADAFQKGEHFDFVMIDMGMEGFRELESWRHWFHILDKQMTQVIGLTTVFQLEEVAAEATEHGVDAFLSKPVTRNALLEVLRFSHEQEKSVSVDHHSLEAVATMNLQYEVGVSTQKYQILVAEDNEISQVVITEFLAERGFEVTIVTNGREVIELLERCSWDMVLLDLHMPEMDGFETARHIRRNRAFNRLPVIAFTADAVQTQQEICLRAGINDVLLKPVHKLTATRILNSWIHLAWLQELHGIHAEKAIAGMDGKVYIFQFALHKWIQEYQYLDKRVVRKMDNGQLSSALRLIHSLKGGTGNLCATELLAKVIKLERALKRSNETSGGELYPDWREQLSIVQKEINQIKSSIPWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI02</accession>
    <name>E3EI02_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_11855</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371099.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24180"/>
    <dbReference type="EnsemblBacteria" id="ADO56494">
        <property type="protein sequence ID" value="ADO56494"/>
        <property type="gene ID" value="PPSC2_11855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2510"/>
    <dbReference type="eggNOG" id="COG3706">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_11_1_9"/>
    <dbReference type="OMA" id="MASTVIC"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="238"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="43448" checksum="07E7B5E056559E8B" modified="2011-01-11" version="1">MNKTKRLTQTMDYRTKQARWVRKMLLLYWMIITVHFIVQLGSYLFLDYPASPYEFYVGVLIVPTLIMSGSNLLAELAHFKFSRYSFAILFMASTVICWMIIRLNYDIRIIPALCLLPIFSSILFFNRRLIWLSFALQVIVFFLLLAIDGSFRSYLSDFDIVAIPTFLIMSTFLALIIQASGRDLLVDLYKTKRAQQELMISNAIISKMSMTDGLTKLYNHLSFQNFYEKALEYAEQGAIIHLALVDIDNFKKINDTYGHQFGDKILEGISQIITEQITANDIPARYGGEEFAILMFEHTFEEAYQIVENIRREVEKMTFQEKMQIVSVTVSIGLKSYTEDMNKDKDVFFQETDDYLYQAKRSGKNKIVALDHIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI59</accession>
    <name>E3EI59_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ynaD1</name>
        <name evidence="2" type="ORF">PPSC2_03745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369363.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16560"/>
    <dbReference type="EnsemblBacteria" id="ADO54727">
        <property type="protein sequence ID" value="ADO54727"/>
        <property type="gene ID" value="PPSC2_03745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.737"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_3_6_9"/>
    <dbReference type="OMA" id="QVFKDFP"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="18"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="198" mass="22649" checksum="520376B76D615DAD" modified="2011-01-11" version="1">MCAYASKGHIPLLESPRLRLRRMESRDAATMFACWSDPEVHRYMNLSGMSGREDAEDMIGLLNELAKTEDALRWGIELKDNGKLIGSCGFNYWQTEGAYKAEIGYELAKPYWRQGYMTEALRLVLSFGYGTIRLNRIEALVDPRNTGSQALLSSMGWTQEGLLRQVQHTSTGFKDMLMYSLLHEEWLRLEVQRNAVSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIH4</accession>
    <name>E3EIH4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Iron-hydroxamate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ybbB3</name>
        <name evidence="4" type="ORF">PPSC2_06285</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369918.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1307"/>
    <dbReference type="EnsemblBacteria" id="ADO55287">
        <property type="protein sequence ID" value="ADO55287"/>
        <property type="gene ID" value="PPSC2_06285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1297"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028727_1_0_9"/>
    <dbReference type="OMA" id="RIIYHGE"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="197"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="3">
        <location>
            <begin position="317"/>
            <end position="573"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="573" mass="64413" checksum="CFFED648248F80BC" modified="2011-01-11" version="1">MNQPSSSVNAPPPNSLLFHFKEIVLASESSDGLTSRPSSDHCLLMFIGGAGKVDIGQEQYVFHSGHGYWLTPGESYRIAPLEGTVSEYYKITFRVIAMSLEAQSDMTLAENATGMPSIYLGSVLPEPREYVISSSSKPIQLAEELFYSTQQTIQPHSQTSALRQQIMFQELLLLWQEAHVPIKHSDDSNLTLPASVESTLTYMEKHYEKPITVKQLAEQANVSIWQYSQLFRKITGKKPLHYLTELRLTHAKRLLLECKRPLREIARQVGFSDEYYFNRRFRQMTGVPPGQYALSAPGSMCVKDWTGHQIHIPRQASRIIYHGETMGDLLALGAKAIGGSLRLSESSVYKHRLGNVTDVGLPLDTRLISALDPDLIIIANSDEQEYERVASIAPTVTFNSFAALEERLRTLGAWLGKEREAERWLATFAARNLAMWNQLSAHITAGETASVFIFDHGDRLFVMGMSGFSSALYHPHGFQPAEPIRKVLDEGLGFAEIDPNELPDYAGDRIFMLVPTAPDSKQPLEYMLNSPLWLSLPAVRQGRVYFVEADRWNWSDAMTRQKLLTALPKLLIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIH9</accession>
    <name>E3EIH9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370244.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55617">
        <property type="protein sequence ID" value="ADO55617"/>
        <property type="gene ID" value="PPSC2_07800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1622"/>
    <dbReference type="HOGENOM" id="CLU_152492_0_0_9"/>
    <dbReference type="OMA" id="PYHSLER"/>
    <dbReference type="OrthoDB" id="1842540at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="15951" checksum="C1B45E949536A97C" modified="2011-01-11" version="1">MNLNEIKQLPDVMSKEQLESYIIQYLDSIENLEKLNILETLECFSEFADRKTYTYELLSDLLRKRLNSFLQKIWNDTSTEIVDVYSSVVVNLNLKNSYNLMKESLNKDLNEDVREIIEETVDEIGEDIEVPFKMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIZ6</accession>
    <name>E3EIZ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cell division protein FtsK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ftsK5</name>
        <name evidence="5" type="ORF">PPSC2_10395</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370784.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22860"/>
    <dbReference type="EnsemblBacteria" id="ADO56177">
        <property type="protein sequence ID" value="ADO56177"/>
        <property type="gene ID" value="PPSC2_10395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2191"/>
    <dbReference type="eggNOG" id="COG1674">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003134_2_1_9"/>
    <dbReference type="OMA" id="WEWMKWL"/>
    <dbReference type="OrthoDB" id="7548at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023839">
        <property type="entry name" value="Firmicutes_EssC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002543">
        <property type="entry name" value="FtsK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01580">
        <property type="entry name" value="FtsK_SpoIIIE"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03928">
        <property type="entry name" value="T7_EssCb_Firm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50901">
        <property type="entry name" value="FTSK"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="5" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="34"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="67"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="FtsK" evidence="4">
        <location>
            <begin position="462"/>
            <end position="660"/>
        </location>
    </feature>
    <feature type="domain" description="FtsK" evidence="4">
        <location>
            <begin position="809"/>
            <end position="991"/>
        </location>
    </feature>
    <feature type="domain" description="FtsK" evidence="4">
        <location>
            <begin position="1096"/>
            <end position="1271"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="93"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="486"/>
            <end position="493"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="825"/>
            <end position="832"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="1113"/>
            <end position="1120"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1331" mass="150343" checksum="7B7935B0DD2737CF" modified="2011-01-11" version="1">MNVLYQRSPRLRPALREEKLEILRPPAEPSKPSFSIISILIPLMMTLVTVGFYVYMSRTGKMGNSNYLMFQMVTVVMMLTSYTIPFFVYLNNKKEYKRKLEERDRMYREQLQKHREELEMKREEQIRTLYEIHGDPQICTQIVKNRNSSLWERSPEDEDFLQVRIGTGQVPFHIKLQIPRPDGYDRDPLLGAADELEEEFRLVDAASITLPLFQSKVVGLVGEREHTLAALRVILAQVTVRHSPDEVKIASFYDEREESEWSWMRWLPHVWDDDRIQRMMSDRSSSAHQLADFLFARLNRRKNNRNDRQGKGMEAPCYVIVLSDTQLIEEEPLLPLLLEDGRAIDACTIVLASRKEALPMQCQLIVEASKEQGVYALKSESAEVEQQSFKPDRLSKEEADALARYMAPIRLKRSSASDIPAVLPLFDMMSVASVEELDVADRWRRNRHPDTLPVPMGVRAGGKKIMINLHDKIERQGHGPHGLIAGTTGSGKSEVIQSIVASLAAEFHPHDLAFMLIDYKGGGMSNTFVNLPHVVGTITNLDNNLIERAKISLKAELVRRQKILNDAGNLQHIDEYYRLLRQRQEQPLPHLVIIIDEFAQLKRDQPEFMDELISIAAIGRTLGVHLILATQKPAGVVDDKIWSNSRFRICLRVQSEGDSRDMLKIPNAAWITKPGRGYFQVGSDEVFEEMQFAWSGAPYIGNRDISSALPVHEVRLNGKREALLTGGERASSGLKGEEAPKQLQVFIDYIAKEAAKAGIERLQGPWLPPLPEMLDLTNLPQCTEIDSTSSSLELKSLIGLVDDLPNQRQEPMYASLDHGHWAVYGMPGMGKTTFLHTLLMSAAQRYAANHWNGYIIDMGRTMRDFGELPQIGAVMMAEEDDRIKRLFRYLFKMVALRKEMLSEAGVKTISSFRRSAVEDVPQIVVVIDGYLNFRNAYPDENELLESLLREGGSLGITFIITANRITDVFEKFRSNIPNAVSFELADPSDYYYAVGRPAKTPGPLIPGRALVKGHVPPLEFQTALPSPGEDEAERSAQLRRNIAGIVQGWKGKHAPAILPLPERVPLLELLQQWDRTSGPSGALPYEVPVGLQSDDLEPFLLNLKEGPNFIVGSPMEGGKTSFLMSWIISLAYYTSPDQMQVYTIDTRYGGGGLSRLRHLPHVKAAAESEEEMGPLVQQVHDIIQQRSKDGNDPELLLVIDDADMLSKQLNDFMIKDQLSAIVRLGRDRNVHVVLSGVPSDFPTFGVDWFNDVKASQSGMLFGTLDSNDLSFFRIPYSEANAAAGGLKVLPPGQGYYVRRKFTRIKAAIPFSEQMSCEDWITKIRDRWHVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ17</accession>
    <name>E3EJ17_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370804.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2226"/>
    <dbReference type="EnsemblBacteria" id="ADO56198">
        <property type="protein sequence ID" value="ADO56198"/>
        <property type="gene ID" value="PPSC2_10485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2215"/>
    <dbReference type="eggNOG" id="ENOG5030V29">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2602748_0_0_9"/>
    <dbReference type="OrthoDB" id="2229626at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="8889" checksum="0496980C67B52C3B" modified="2011-01-11" version="1">MKKAIVFFVMLIVGLVVTEQAVDILTTRGRGEAIYKMGMLIPAQDFYLYLYGSIFLLLGLLLILSPLLFKKCFIAKKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJE2</accession>
    <name>E3EJE2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SnoaL-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371034.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2457"/>
    <dbReference type="EnsemblBacteria" id="ADO56429">
        <property type="protein sequence ID" value="ADO56429"/>
        <property type="gene ID" value="PPSC2_11560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2444"/>
    <dbReference type="eggNOG" id="COG3631">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_124277_2_0_9"/>
    <dbReference type="OMA" id="MEFPFAP"/>
    <dbReference type="OrthoDB" id="1644255at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="21"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16231" checksum="B8957FC2FD65F8DB" modified="2011-01-11" version="1">MNINPNTDDAKQQAQAVMHKFTSNLLEENMEQWISLFDDNAVFEFPYAPKHFVQVLQGKAAIYEYIKEFPSILRIQHFSSPTIHTTTDPSLFVAEFASEAQAVSTGKPYNQTYISVIKLKNGKISHYKDYWNPLVALEALES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJK0</accession>
    <name>E3EJK0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">D-alanine--D-alanine ligase</fullName>
            <ecNumber evidence="7">6.3.2.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">D-Ala-D-Ala ligase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">D-alanylalanine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ddl</name>
        <name evidence="11" type="synonym">ddlB</name>
        <name evidence="11" type="ORF">PPSC2_12130</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Cell wall formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + 2 D-alanine = ADP + D-alanyl-D-alanine + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11224"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57416"/>
            <dbReference type="ChEBI" id="CHEBI:57822"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="8">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="8">Binds 2 magnesium or manganese ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the D-alanine--D-alanine ligase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.4" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371154.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24480"/>
    <dbReference type="EnsemblBacteria" id="ADO56550">
        <property type="protein sequence ID" value="ADO56550"/>
        <property type="gene ID" value="PPSC2_12130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2565"/>
    <dbReference type="eggNOG" id="COG1181">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039268_1_1_9"/>
    <dbReference type="OMA" id="MQGLLEC"/>
    <dbReference type="OrthoDB" id="764798at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008716">
        <property type="term" value="F:D-alanine-D-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00047">
        <property type="entry name" value="Dala_Dala_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000291">
        <property type="entry name" value="D-Ala_lig_Van_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005905">
        <property type="entry name" value="D_ala_D_ala"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011095">
        <property type="entry name" value="Dala_Dala_lig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011127">
        <property type="entry name" value="Dala_Dala_lig_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07478">
        <property type="entry name" value="Dala_Dala_lig_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01820">
        <property type="entry name" value="Dala_Dala_lig_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039102">
        <property type="entry name" value="Ddl/VanB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01205">
        <property type="entry name" value="D_ala_D_alaTIGR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00843">
        <property type="entry name" value="DALA_DALA_LIGASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00844">
        <property type="entry name" value="DALA_DALA_LIGASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 7 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0464">Manganese</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="10">
        <location>
            <begin position="101"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR039102-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="33305" checksum="F3040C21E51E62DB" modified="2011-01-11" version="1">MKIGVIMGGTSTEREVSLQTGQEMLNHLDRSRYEVVPIVIDQPADLIAQVQHTGIDFALLALHGQYGEDGTVQGALETLGIPYTGSGVLASSLCMNKQLSKMLLKSAGVLTPAGLCWQGMGDYDQQAVEQLGYPVIVKPNMGGSSIGIQLVHNEKELHSAIQKACALDQTILVEPFIQGTELTCSIVDGEVLPIIRIRSAHSEWFDYKAKYETGGAEEKVIQLPPVIEQRVRETALASYRLLQCKVYARIDMILCQDVPYVLEVNTLPGMTANSLLPKSAAAAGITFTQLLDRIITSSLHERKRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJQ2</accession>
    <name>E3EJQ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386064.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0258"/>
    <dbReference type="EnsemblBacteria" id="ADO59650">
        <property type="protein sequence ID" value="ADO59650"/>
        <property type="gene ID" value="PPSC2_26895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5685"/>
    <dbReference type="HOGENOM" id="CLU_1516480_0_0_9"/>
    <dbReference type="OrthoDB" id="1563234at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="177" mass="21190" checksum="F59841C48A6EEA1E" modified="2011-01-11" version="1">MTKENLRAGIQFILDKEIVPTEFVHHFGKSYVFDLKETLGIQIVFDKNTCCVYTYMGFDMFMCFHKPIGDNERLENSVWYKLQYRADRKLLKRLVQYIEKLKLKGILSYSNHIVLDSKGTFLGKELLDYIEEENIEAIERYIIQRPHHLFYFTRGAIKDLKDIKDKLKYKKKLLESF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJW1</accession>
    <name>E3EJW1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Metallophos domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386123.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0318"/>
    <dbReference type="EnsemblBacteria" id="ADO59709">
        <property type="protein sequence ID" value="ADO59709"/>
        <property type="gene ID" value="PPSC2_26605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5616"/>
    <dbReference type="eggNOG" id="COG1409">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078716_0_0_9"/>
    <dbReference type="OrthoDB" id="1690667at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="1">
        <location>
            <begin position="6"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="31748" checksum="3669AAC7E60895D9" modified="2011-01-11" version="1">MSRFFDLISDIHLDFWVKVDSNLRKMEKKIDLFVDSLVPTSPSNVLVIAGDLGHYNNQNVIMLRSLMRYYESIVMVRGNHDLYLVSGKQSKKYKWLSENRWREMKDFVNQLPGLFVLEGDTITLEGITFGGTGMWYDFSYGIIEHGKTREELDQIWSKEIRDRKFIKKQPDFAQEEIRFDRIIDESDVIVTHVGGDWSQLLLNARYVKGDSIPSFYFFDGSRWADRLSGKAWCFGHVHDHYDYMRNGCRFINNAKGYPRDNPGAKIKTVMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJW9</accession>
    <name>E3EJW9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386402.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59988">
        <property type="protein sequence ID" value="ADO59988"/>
        <property type="gene ID" value="PPSC2_28245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5989"/>
    <dbReference type="HOGENOM" id="CLU_2937337_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="6590" checksum="90B8F288FF6D1BE5" modified="2011-01-11" version="1">MFTSNIFANIIVSILAMVTYGIVKTDYTLLKMAILGLIVSFVIVIVVAVAMLVFNKKKPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK13</accession>
    <name>E3EK13_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26560</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386136.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0331"/>
    <dbReference type="EnsemblBacteria" id="ADO59722">
        <property type="protein sequence ID" value="ADO59722"/>
        <property type="gene ID" value="PPSC2_26560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5602"/>
    <dbReference type="HOGENOM" id="CLU_1891941_0_0_9"/>
    <dbReference type="OrthoDB" id="2165567at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="12119" checksum="C08EE9B2D0CDF6BC" modified="2011-01-11" version="1">MNTIIINGQRITVSGNNVSIVGNCVMVDGQTVTSGLSGTVHVQFEGDLSSLRTDGNVTVHGNVHGNVDAGGSVTCEQVGQNVDAGGSVACNDVQGNVDAGGSVRCGNIQGNIDAGGSIRHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKI2</accession>
    <name>E3EKI2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_26095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386228.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59814">
        <property type="protein sequence ID" value="ADO59814"/>
        <property type="gene ID" value="PPSC2_26095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5493"/>
    <dbReference type="eggNOG" id="ENOG50307GP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2466083_0_0_9"/>
    <dbReference type="OrthoDB" id="2099441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="79"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="13055" checksum="BC5B1318189B6844" modified="2011-01-11" version="1">MVTLKDSPNKKEIREHYEQVWNELLERDEEEAKRVLEKLTSELLVTDKEEGEVEYELLPTHQKSFETMRLILSLFKTRLLWILLLSVIAFFLLSYVLFIYVSLWVEDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKK3</accession>
    <name>E3EKK3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_25995</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="14 15">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
            <plasmid evidence="14 15">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the transposase 35 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the transposase 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386249.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0446"/>
    <dbReference type="EnsemblBacteria" id="ADO59835">
        <property type="protein sequence ID" value="ADO59835"/>
        <property type="gene ID" value="PPSC2_25995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5467"/>
    <dbReference type="eggNOG" id="COG0675">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032903_0_0_9"/>
    <dbReference type="OMA" id="RDGEHEW"/>
    <dbReference type="OrthoDB" id="222391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001959">
        <property type="entry name" value="Transposase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010095">
        <property type="entry name" value="Transposase_IS605_OrfB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021027">
        <property type="entry name" value="Transposase_put_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12323">
        <property type="entry name" value="HTH_OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01385">
        <property type="entry name" value="OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07282">
        <property type="entry name" value="OrfB_Zn_ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01766">
        <property type="entry name" value="tspaseT_teng_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-0614">Plasmid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="HTH_OrfB_IS605" evidence="13">
        <location>
            <begin position="24"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_IS605" evidence="11">
        <location>
            <begin position="184"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_Zn_ribbon" evidence="12">
        <location>
            <begin position="309"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF12323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO59835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="44641" checksum="CE09A23BB280CC27" modified="2011-01-11" version="1">MQCSQDFLSENLNSQDFSTKNLIHKAYKYRLYPNREQQQLIHHMFGCCRFVFNHFLALWNDTYTATGKGLSYNTCATRLPALKQKYDWLKKVDSIALQSAVRNVAESFDRFFTKQNDRPRFKSRKHPLQSYTTKYTNGNIAIVGNQLKLPKLGWLRFANSRSCEGRILSATVRRNAAGKYFASIVCEVEIKPLPQTSKEIGIDLGLKVFAVCSDGVRIANPKVFRQYEKKLAFWQRRMARRTKGGSNWSKAKLKVAQIHEKIVNIRHDFLHKLTTMLIRENQTVSIEHLRVANMLKNHKLAKSIADASWSEFKRQLIYKAVWYGRIVKMVDTFAPTSQACHVCGEINPEVKNLQVRQWICTSCHTTHDRDENAAQNIKQMAASWSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKT6</accession>
    <name>E3EKT6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AAA_31 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27410</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385951.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0143"/>
    <dbReference type="EnsemblBacteria" id="ADO59537">
        <property type="protein sequence ID" value="ADO59537"/>
        <property type="gene ID" value="PPSC2_27410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5801"/>
    <dbReference type="eggNOG" id="COG0489">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2894">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_505117_0_0_9"/>
    <dbReference type="OrthoDB" id="740046at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="2">
        <location>
            <begin position="277"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="176"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="176"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="539" mass="61577" checksum="2FC570AC2BAAC549" modified="2011-01-11" version="1">MEKVLLAVDFRQLEDFIKKTLKNEFMFVGVTTYRDGVIRQMGQTMPDIVVIRETLQGNENIMNIIYEIRTKFHNVRIIFLAKKREPGDALLATLVSYGVYDILYGEKILSQEIIRLIRQPNGYKEVQHLQPKPVLDERKNKVLFEKPDVHTIEKEVVKEVLKEVYIDTGADTRAQQANQQILQESSSEIKNEETNSVESEELPKIVSEIKPPHPSLELTSAVSEAAENLINRKINVESTSLESSQPKEKSGLLNKLLGGKSEDNRIKEESLHAGKQKIITFMGSKAGVGNTSIALNTAILLSQKKKRVIYIEMNDRTPAVNYWYELGLIDDGTDRALKAFEENRFEKIKEAIICSADLAEKESALQKNYKKFPHTLDFMFFSNRYLTRRSGDGEEVNLSLTKELYLYLMFQLEYDYVILDVPSDLENQATVNALLYSNTTVITTSQDVSAIGNAVYMLNEMRKNGFQLSKNIHFIVNRFEKADLSMNEIAEWVQVDEVLSVPCMNKDFINANFVGLPVILYSRNSQLKSAFQKIEKTII</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL37</accession>
    <name>E3EL37_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">VWFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59599.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0206"/>
    <dbReference type="EnsemblBacteria" id="ADO59599">
        <property type="protein sequence ID" value="ADO59599"/>
        <property type="gene ID" value="PPSC2_27135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5739"/>
    <dbReference type="eggNOG" id="COG2304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089656_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019303">
        <property type="entry name" value="vWA_TerF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10138">
        <property type="entry name" value="vWA-TerF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="1">
        <location>
            <begin position="26"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59599.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="25858" checksum="40D9CE395EBD6F16" modified="2015-05-27" version="2">MQVLNLRKDTFELVLTKNGYTGGPARVGIVLDQSGSMSSLYRNGTVQSVVERLLPVALRFDDNGELDVWLFADRSKRLNPVSDRDFYQYVDREIMGKRENQIWGGTSYAPVMHDVFQKYVVEEPSNLPTFITFITDGNNSDQAATTKLMKELSKHGIFWQFVGIGHEQFTFLQKLDELTGRVIDNANFFKLNDVNQISDEELYSRLMNEYPDWERNARQQGILR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELD2</accession>
    <name>E3ELD2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386377.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0574"/>
    <dbReference type="EnsemblBacteria" id="ADO59963">
        <property type="protein sequence ID" value="ADO59963"/>
        <property type="gene ID" value="PPSC2_28360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6015"/>
    <dbReference type="eggNOG" id="ENOG502ZR0R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1218799_0_0_9"/>
    <dbReference type="OrthoDB" id="54086at186822"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="227" mass="26322" checksum="2C246CBC977D9C17" modified="2011-01-11" version="1">MQFEYTKNIADFEKKVVVHHRKEWYSALKNVSELHSYVGAPLSNIIKGRPTFVWIITYVSELFEAAYDYGSEHLPPEAVDEVIHYEQEGKLCVYLSVLTYALISYNQIADGKEMKYVQGYYRHKADAVDWISGLLGNEHLGNHAWITIGKAVIDISIKQEERFFRFNCYPVILGEVPPGMTFKGFPELKKTVNKYVEQMAKRRNLSVPDWISQHNTHMVELSKKKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCB2</accession>
    <name>A0A0D5ZCB2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886170.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44375">
        <property type="protein sequence ID" value="AKA44375"/>
        <property type="gene ID" value="PPSC2_27170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5747"/>
    <dbReference type="HOGENOM" id="CLU_1480659_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="21248" checksum="D7E6058C2AED2556" modified="2015-05-27" version="1">MKAKTIPTSLTCTVCGDVKTIHRIIGRQREVDHIKHLYCHKCYCRTAHMEKHKHWAYLEKLRYTKDFNLNKSLKRANYICNKIVDDKGEVVGLTLHLSERRSRLLVTYEEVLSLIDDGMVFDNVEYDPSSETYCLIADREDIHYTQLSHKCYAVSPDMIDRLGDYFCGNLFADTSNEERACM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCF9</accession>
    <name>A0A0D5ZCF9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44259">
        <property type="protein sequence ID" value="AKA44259"/>
        <property type="gene ID" value="PPSC2_13780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2936"/>
    <dbReference type="HOGENOM" id="CLU_1957416_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="128" mass="14732" checksum="DBAFC5F838D56A3D" modified="2015-05-27" version="1">MKRRHIYILISLLVITTIIIFLANPGDNTMRKYPYGKDTLEFFGDGTFQIYRGGGAGEPPILYTHQIEAPNTVIDNVLSYKIEENIVYVVGENGFIKLDSSTNTYEQKKRISDFTSKDREIFNKLMEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCH4</accession>
    <name>A0A0D5ZCH4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44242">
        <property type="protein sequence ID" value="AKA44242"/>
        <property type="gene ID" value="PPSC2_12300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12300"/>
    <dbReference type="HOGENOM" id="CLU_2772062_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="8093" checksum="EF88E9BB4FD5635F" modified="2015-05-27" version="1">MIIYNENSLNRDLVDFFPYRSKASNKKKHGAYAENLFASTQKGRFSRGKKIFSEDHTDSHHYEVPTQLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E485</accession>
    <name>E3E485_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">resE3</name>
        <name evidence="10" type="ORF">PPSC2_12475</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371229.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2656"/>
    <dbReference type="EnsemblBacteria" id="ADO56625">
        <property type="protein sequence ID" value="ADO56625"/>
        <property type="gene ID" value="PPSC2_12475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2645"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_3_9"/>
    <dbReference type="OMA" id="KSIIEHH"/>
    <dbReference type="OrthoDB" id="1031685at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="7"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="45"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="129"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="350" mass="39785" checksum="51D62F98D3422BAD" modified="2011-01-11" version="1">MKLKIKLPLLFLVMFIVFMVSIGIYLKFIFAAYSPISSSLLNPSYIGLLFPIFAIACFIFIILIMYIYFFIEKPIGLLNTRLERINIVHPLPPLALRSNDEIGDLYNHFNKMEKRLQLAHKEQTDIIAAIAHDLKAPLTSINGFAELLAMQKGLSENEKQEYYELIQKKSKYMAELINDFVSFTKEKQDLESMTVKPVDASKLFENIALEYEYELSGLDCELVYKHLFTGNVMLMVNEIMIGRVFGNLFSNVVRYGRKNELKVYMTGYSQGSYAYIEIEDNGTGVPDKDISSLFLKFFTVDKSRQIENGGIGLGLASCKSIIEHHGGEIYAYSSEYGGLGIKFSLPLAKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4D6</accession>
    <name>E3E4D6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SMI1_KNR4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371280.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56676">
        <property type="protein sequence ID" value="ADO56676"/>
        <property type="gene ID" value="PPSC2_12690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2698"/>
    <dbReference type="eggNOG" id="ENOG502ZC7U">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_138556_0_0_9"/>
    <dbReference type="OMA" id="LEAYHEY"/>
    <dbReference type="OrthoDB" id="1991633at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018958">
        <property type="entry name" value="Knr4/Smi1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00860">
        <property type="entry name" value="SMI1_KNR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMI1_KNR4" evidence="1">
        <location>
            <begin position="27"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="17846" checksum="30CF2C2A0AB2C638" modified="2011-01-11" version="1">MESAALEPIRALLNQAYQTVMGKSCTRESEQAIVDFEKKHNVILPESYRDLLLYYGACHFGDPALYSVQELDWAYPAFLEAYHEYKKEYDLPEDLNPFPIGGFGEGSIAVLERNSGKVLMLIHDYAGDYPFQEVAPHFNGLMEMLAGSAIWVQEQMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4H3</accession>
    <name>E3E4H3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Pilus assembly protein CpaF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tadA</name>
        <name evidence="4" type="ORF">PPSC2_13635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371475.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01325"/>
    <dbReference type="EnsemblBacteria" id="ADO56872">
        <property type="protein sequence ID" value="ADO56872"/>
        <property type="gene ID" value="PPSC2_13635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2901"/>
    <dbReference type="eggNOG" id="COG4962">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030333_0_0_9"/>
    <dbReference type="OMA" id="TIFTHHA"/>
    <dbReference type="OrthoDB" id="226048at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="T2SP_E" evidence="3">
        <location>
            <begin position="269"/>
            <end position="494"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="611" mass="70424" checksum="31393D26F98764E4" modified="2011-01-11" version="1">MLSAHMINGLIVTCIVLLCIVLIIVKYRGNLYSQHSALRVEPKNEDATFETLIEYIKNALHELSHSQMADAGLHEEEYRRRIHQRAELRRALKDCANGSSGDKRFVKNLMSELLINGYGLNEKIADTVMPFSRPELFDTQDQFEIIFYQYQQKFGADALSRLLDTYDLAEMRYSQQGEEDGSYFVTTEDIRYIYDCEYRPLSFMEKVDIIVQRIYQNYKGFSVIDDIRDQKIDGVSGGVSGVPEGGIPSSPHWSSDRFVFEQTSAPTTNGYESVWIFYKGKTIHLSFLSFESERELKRVCQNIYKYNYPGQLSEANGYKVNEMKDGSRVVVVRPPFSESWAFFVRKFDIQSASLEQLIRGQNADFPIQLLSYLMKGSRITAITGAQGSGKTTLLMAMVKHIYASYTLRVQEMAFELHLRNIYSRRNILTFRETDHISGQQGLDLQKKTDGTVNILGEVASDEVAAWMIQMSQVASLFTIFTHHAKTFRDLVFSLRNSLLKTGVFQHEGIAEEQVVHVINFDVHLKRDAQGRRYIERITECVPRNPEHTDVGPNASSSYSYRHVMEYRNESYIPMKPLTAKSVEEMCEQMNAKDATDFRSFLTRYWEEDYES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4R4</accession>
    <name>E3E4R4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Aspartate 1-decarboxylase</fullName>
            <ecNumber evidence="9">4.1.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Aspartate alpha-decarboxylase</fullName>
        </alternativeName>
        <component>
            <recommendedName>
                <fullName evidence="9">Aspartate 1-decarboxylase beta chain</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="9">Aspartate 1-decarboxylase alpha chain</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="9 14" type="primary">panD</name>
        <name evidence="14" type="ORF">PPSC2_14430</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>H(+) + L-aspartate = beta-alanine + CO2</text>
            <dbReference type="Rhea" id="RHEA:19497"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:57966"/>
            <dbReference type="EC" id="4.1.1.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9 10">
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </cofactor>
        <text evidence="9 10">Binds 1 pyruvoyl group covalently per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="9">Cofactor biosynthesis; (R)-pantothenate biosynthesis; beta-alanine from L-aspartate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Heterooctamer of four alpha and four beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="9 12">Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the PanD family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.11" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371641.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02080"/>
    <dbReference type="EnsemblBacteria" id="ADO57042">
        <property type="protein sequence ID" value="ADO57042"/>
        <property type="gene ID" value="PPSC2_14430"/>
    </dbReference>
    <dbReference type="GeneID" id="66577094"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3080"/>
    <dbReference type="eggNOG" id="COG0853">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_115305_2_0_9"/>
    <dbReference type="OMA" id="MLYSKIH"/>
    <dbReference type="OrthoDB" id="1751990at2"/>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00002"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004068">
        <property type="term" value="F:aspartate 1-decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006523">
        <property type="term" value="P:alanine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06919">
        <property type="entry name" value="Asp_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00446">
        <property type="entry name" value="PanD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003190">
        <property type="entry name" value="Asp_decarbox"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21012">
        <property type="entry name" value="PTHR21012"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02261">
        <property type="entry name" value="Asp_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006246">
        <property type="entry name" value="Asp_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00223">
        <property type="entry name" value="panD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="1 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 9" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="6 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="2 9" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="8 9 10" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9 10" id="KW-0704">Schiff base</keyword>
    <keyword evidence="5 9" id="KW-0865">Zymogen</keyword>
    <feature type="chain" id="PRO_5013997801" description="Aspartate 1-decarboxylase beta chain" evidence="9 13">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5013997797" description="Aspartate 1-decarboxylase alpha chain" evidence="9 13">
        <location>
            <begin position="25"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9 11">
        <location>
            <begin position="73"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate; via pyruvic acid" evidence="9 10">
        <location>
            <position position="25"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="9 10">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9 11">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="modified residue" description="Pyruvic acid (Ser)" evidence="9 12">
        <location>
            <position position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR006246-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR006246-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR006246-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR006246-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO57042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="14013" checksum="57FE0BAC540912A8" modified="2011-01-11" version="1">MFRTMMKSKIHRATVTEANLNYVGSITIDEDLMETSDLLENEKVQIVNNNNGARLETYVIPGPRGSGVICLNGAAARLVQPGDTVIIISYASMSNEEAKTYKPTVVFVDEHNKPAQTMNKEVHATIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z2</accession>
    <name>E3E4Z2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YqhR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yqhR</name>
        <name evidence="3" type="ORF">PPSC2_15170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371791.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02790"/>
    <dbReference type="EnsemblBacteria" id="ADO57200">
        <property type="protein sequence ID" value="ADO57200"/>
        <property type="gene ID" value="PPSC2_15170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3238"/>
    <dbReference type="eggNOG" id="ENOG5030H6A">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_124945_0_0_9"/>
    <dbReference type="OMA" id="CLYILYG"/>
    <dbReference type="OrthoDB" id="1442313at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024563">
        <property type="entry name" value="YqhR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11085">
        <property type="entry name" value="YqhR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="96"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="22407" checksum="0E5B58156A4E5749" modified="2011-01-11" version="1">MSETYSIPKIGHDQEQSRESQDQRNHNDNSSRGRQQSGKVHTPLIPFALELGFFAGLLWGLLRWLFYTLHFTVVAPGFLAEPFFKHSFMNTMAGHLVGLLFFIALSVVASLVYTLILRRFNGPIPGIIYGLIWWVVLFVLTGPKLGMMNPPYRLTWNSIYTEVCVFLLWGLFIGYTVAVEYTDERMREPEKAGGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E573</accession>
    <name>E3E573_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA packaging protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gp17a</name>
        <name evidence="1" type="ORF">PPSC2_16280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372019.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3477"/>
    <dbReference type="EnsemblBacteria" id="ADO57433">
        <property type="protein sequence ID" value="ADO57433"/>
        <property type="gene ID" value="PPSC2_16280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3475"/>
    <dbReference type="eggNOG" id="COG4373">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038244_0_0_9"/>
    <dbReference type="OMA" id="QLMWRRW"/>
    <dbReference type="OrthoDB" id="892377at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="561" mass="64759" checksum="DB5AEF397BF19DA5" modified="2011-01-11" version="1">MVITLAKEHRRRAKRRLRDRPEKLDELKGILADFEQFCWRMLKIKTKSGRIMPLTLNDAQRTFVREVFRQIEAGKPVRIIILKARQMGFSTVTEALIYYFTSLQEAKNAFIVAQSSDASSNLYDMFQFYYEKVPAIIKPMSRKNNAKKLTFENPTIRTADRRMNPGLKSKITVQTAESRVLARSDTIHYLHASEVAFWPAKKKKKHLLSLLAALSKEPGSLGVIESTANGIEEFKKMWDAAVKGESDFTPLFFAWFEMPDYRKPVPPGFELTEEEWKLKEKYALDDEQLQWRRYTIRNDCGGDPRQFDQEYPSEPDDAFLLSGEGIFDNKFIKSLRDAISAIGSRHEIDFVKNKIIPAPSGELVMYRQPEQGKRYVLAADTAKGKEDGDYDAAYVIEERTGEMCAALHGKWDTDLYGKKLNTLGLYYNTALLAVENNNTGESVLNTLFNTCHYPLLFMHKKSLGWNTNQATRPVMISDFKEAIRDQLYDIYCPKLYSECMTLIDKNGRAEADSGCHDDRILAYSIALQVRQVADKWFEWFKKKQQQRAESRDDYNEGVGWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D2</accession>
    <name>E3E5D2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Pyridoxal phosphate homeostasis protein</fullName>
            <shortName evidence="1">PLP homeostasis protein</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ylmE</name>
        <name evidence="5" type="ORF">PPSC2_16550</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372077.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03885"/>
    <dbReference type="EnsemblBacteria" id="ADO57492">
        <property type="protein sequence ID" value="ADO57492"/>
        <property type="gene ID" value="PPSC2_16550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3533"/>
    <dbReference type="eggNOG" id="COG0325">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059988_1_2_9"/>
    <dbReference type="OMA" id="PLEWHMI"/>
    <dbReference type="OrthoDB" id="1423012at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02087">
        <property type="entry name" value="PLP_homeostasis"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001608">
        <property type="entry name" value="Ala_racemase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011078">
        <property type="entry name" value="PyrdxlP_homeostasis"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10146">
        <property type="entry name" value="PTHR10146"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01168">
        <property type="entry name" value="Ala_racemase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004848">
        <property type="entry name" value="YBL036c_PLPDEIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00044">
        <property type="entry name" value="TIGR00044"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01211">
        <property type="entry name" value="UPF0001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ala_racemase_N" evidence="4">
        <location>
            <begin position="27"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="1 2">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR004848-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26197" checksum="298EB2A071AAAC8F" modified="2011-01-11" version="1">MSLEERIKEVNARIEAACARSGRSRDEVNVIAVTKYVSAAAMASVLDNDLEHVGENRWQDAADKWSKLGDRGTWHFIGHLQTNKVKDVIGKFKFIHSLDRLSLAQELDKKAAALGLRVKAFVQVNISGEISKYGLSPETVAPFLEQIRELEHVDVIGLMTMAPHEEDPEHTRPVFRGLRELRDRLNGQALTREPIVHLSMGMSNDFEVAVEEGATWLRLGSVLVGREEDFQWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y1</accession>
    <name>E3E5Y1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372772.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58200">
        <property type="protein sequence ID" value="ADO58200"/>
        <property type="gene ID" value="PPSC2_19880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4237"/>
    <dbReference type="eggNOG" id="ENOG503054B">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1650467_0_0_9"/>
    <dbReference type="OMA" id="WIKAYRI"/>
    <dbReference type="OrthoDB" id="1247249at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="18611" checksum="1B491632EAD641ED" modified="2011-01-11" version="1">MTPNQHLMTYTLNSGIKGTVDLTSKQVQEWIKAYRIGSKFVTVVGKQYFGLNPELVADFKVHNEYSEQREHISMIQPVMEHKAVDLDPLIEAYSQYKTLIQVECKCGASYIEESPHKRTKWSCKECNNIVFLDRKKGMVDTNTGKAWYMTNKYYVERQSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Z0</accession>
    <name>E3E5Z0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372781.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07145"/>
    <dbReference type="EnsemblBacteria" id="ADO58209">
        <property type="protein sequence ID" value="ADO58209"/>
        <property type="gene ID" value="PPSC2_19925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4246"/>
    <dbReference type="eggNOG" id="COG3694">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071040_0_0_9"/>
    <dbReference type="OMA" id="IDFALRP"/>
    <dbReference type="OrthoDB" id="1552415at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010390">
        <property type="entry name" value="DUF990"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06182">
        <property type="entry name" value="ABC2_membrane_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="213"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="30757" checksum="2C06EB19B1CCF8D4" modified="2011-01-11" version="1">MKNVFQNIRRYIRLYWKFVQFSVMSQMEYRTNFISACLVETAYLFIKLLYASLPYRAGTDINGWSPDAMLLYIGVFTMMSGFYSGLFYSNFTSLPDKIRTGSLDVLMTKPVSLQFMVTLRQFELGYTLPNVIGGGIMTGVGWHRLGLPFNLETVGGFSVLLGCGVLTAYSVFLLPQLLAFWIIRTNGVTELSNSIFETNYVPMAVYSNLIQRIGLFVLPVFVICNFPPMFILGKMEPGLMLWAFLAPLWLLAIIRLIWQFALRDYTSASQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E622</accession>
    <name>E3E622_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_12825</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371311.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00420"/>
    <dbReference type="EnsemblBacteria" id="ADO56707">
        <property type="protein sequence ID" value="ADO56707"/>
        <property type="gene ID" value="PPSC2_12825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2730"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_0_9"/>
    <dbReference type="OMA" id="FWIAERV"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="3"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="365"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="473" mass="55756" checksum="A35976B4005429AD" modified="2011-01-11" version="1">MIKVLIVDDDKLVRKGISSAMPWNEFNMEVVGEASNGLKALDFLKSQPVDLMLTDLAMPVMSGIELMRAARQLYPELHIVVLTLHQDFDYIQEALRLGAIDYIAKVQLEKEQFEHVLHRIHIRIDELANKKRKLPLLSETNVHYRHVYALVSLDRKLGQSWPIEPTSSVDEIRWEVERNSWMWAAPMDLEDQLFHKLKEYRDQVPQGALLVMSDVQERTWSQIQNWIMNYTETSLFYAYDPYDPVIAVSMNVEESFPIEPQDEDMDRIKQSWFLSPWTHNDSYYNQLIEQFKSLRLQKSQLMGLLYSIVMEWNHLFAESTLGRISMIHSFLSWYEVEAWIKQTSVDIRKADEQTSYSQEIVDAVKKAIMIMQNDLDQAFTASGLSRQLNISRSYFSQCFKDLMGKTFNEYSRFIRIEKSKEYLLNTNNQIFWIAERVGYTDEKYFSRIFRELTGLLPSEYRQLGRGDKKRTLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6A7</accession>
    <name>E3E6A7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Membrane-associated protease 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007431573.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05975"/>
    <dbReference type="EnsemblBacteria" id="ADO57976">
        <property type="protein sequence ID" value="ADO57976"/>
        <property type="gene ID" value="PPSC2_18760"/>
    </dbReference>
    <dbReference type="GeneID" id="66576313"/>
    <dbReference type="KEGG" id="ppm:PPSC2_18760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4020"/>
    <dbReference type="eggNOG" id="ENOG50316XK">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127518_0_0_9"/>
    <dbReference type="OMA" id="KADCYRK"/>
    <dbReference type="OrthoDB" id="1473894at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="15480" checksum="EE166D279622F414" modified="2011-01-11" version="1">MGFRLKVEGQETIELGLDNIQTVIYDTDTPDDSNARSTDVGSTLRISGKIITAVDGDSADDTLKLALWSLVPAEKADSYRKVTLEVIAADQVVRKIYFPNAFVVDYNEHFGDTEGVGAFTLYIKQKKDKTELATIDGGYPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G0</accession>
    <name>E3E6G0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0473 protein PPSC2_19000</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_19000</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0473 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372606.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06210"/>
    <dbReference type="EnsemblBacteria" id="ADO58029">
        <property type="protein sequence ID" value="ADO58029"/>
        <property type="gene ID" value="PPSC2_19000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4072"/>
    <dbReference type="eggNOG" id="COG3906">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_146610_2_1_9"/>
    <dbReference type="OMA" id="EVYAFRY"/>
    <dbReference type="OrthoDB" id="2057244at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01448">
        <property type="entry name" value="UPF0473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009711">
        <property type="entry name" value="UPF0473"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06949">
        <property type="entry name" value="DUF1292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11678" checksum="E628BB7304F3A329" modified="2011-01-11" version="1">MAENQLGMEEEPEIIYIADDEGNEEEFEVIMKFEVDGSEAKYMMVAPVDPEADESDVYAFRYEEEGDDIKLFVIQDDAEWEIVEETFNTFVEEEEEEDGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6I4</accession>
    <name>E3E6I4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-glucose 4-epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">galE3</name>
        <name evidence="2" type="ORF">PPSC2_20085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372816.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07310"/>
    <dbReference type="EnsemblBacteria" id="ADO58244">
        <property type="protein sequence ID" value="ADO58244"/>
        <property type="gene ID" value="PPSC2_20085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4281"/>
    <dbReference type="eggNOG" id="COG1087">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_1_7_9"/>
    <dbReference type="OMA" id="GPRMPRD"/>
    <dbReference type="OrthoDB" id="1180629at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="33554" checksum="1E8D45308216AFB4" modified="2011-01-11" version="1">MKALVTGGAGFIGSQLVRALADSGIRVHVLDNLTTGNAANVDPRAVMHIADIRSSEARTLLIRESPDIVFHLAAQADVQHSIHHPDEDADVNVLGTIHLLQACREAGVSKIIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYTILRYGNVYGPGQAAKGEGGVVAIFMDRLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAAIHAADQRTVHVSTGRTTSINRLAYDLLKLHGSSVRPVYSPARTGDIHHSCLSNAVARHWLHWEPLYGISAGLKETYVSSMGTDKEGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6P9</accession>
    <name>E3E6P9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATPase AAA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dnaI3</name>
        <name evidence="3" type="ORF">PPSC2_20360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372880.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07615"/>
    <dbReference type="EnsemblBacteria" id="ADO58309">
        <property type="protein sequence ID" value="ADO58309"/>
        <property type="gene ID" value="PPSC2_20360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4342"/>
    <dbReference type="eggNOG" id="COG1484">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077384_1_0_9"/>
    <dbReference type="OMA" id="HFTYSQR"/>
    <dbReference type="OrthoDB" id="1792718at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009928">
        <property type="entry name" value="DnaI_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002611">
        <property type="entry name" value="IstB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07319">
        <property type="entry name" value="DnaI_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01695">
        <property type="entry name" value="IstB_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DnaI_N" evidence="2">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="IstB_IS21" evidence="1">
        <location>
            <begin position="167"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="315" mass="36294" checksum="D4B574C13BB4F99C" modified="2011-01-11" version="1">MESLGDLLQQMQNPSFRQRTRSVADQVLNDPLVKEFCAAHPDVDETQLRLNMSMLFQYTRDRRNCDNCPGLERCPNDFQGHFCKLGVEYPNGTAEMVDIRTPCAKLVASQHEQRVRERIKSFYVDERALLEGYNAVEIARKDLQRVPAVNQVFRYIEETKSQGLLKKGLYLEGTFGTGKTFLMGYLLHELALSGFNGVIVYMPDFVEDLKSMIQDGQKLKETTEMLKNCDLLVFDDIGAENLSPWVRDHVMGSILNYRMNRKPTFYTSNYSLQGLEKHLSFTSKDGEEMYKGQRLMDRIRPFVDVITVKGKNQRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Y6</accession>
    <name>E3E6Y6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA pseudouridine synthase A</fullName>
            <ecNumber evidence="4">5.4.99.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">tRNA pseudouridine(38-40) synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">tRNA pseudouridylate synthase I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">tRNA-uridine isomerase I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">truA</name>
        <name evidence="9" type="synonym">truA3</name>
        <name evidence="9" type="ORF">PPSC2_22285</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 7">
            <text>uridine(38/39/40) in tRNA = pseudouridine(38/39/40) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:22376"/>
            <dbReference type="Rhea" id="RHEA-COMP:10085"/>
            <dbReference type="Rhea" id="RHEA-COMP:10087"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="EC" id="5.4.99.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 7">Belongs to the tRNA pseudouridine synthase TruA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.12" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373252.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09750"/>
    <dbReference type="EnsemblBacteria" id="ADO58688">
        <property type="protein sequence ID" value="ADO58688"/>
        <property type="gene ID" value="PPSC2_22285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4726"/>
    <dbReference type="eggNOG" id="COG0101">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014673_0_1_9"/>
    <dbReference type="OMA" id="FLYGMVR"/>
    <dbReference type="OrthoDB" id="1075262at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106029">
        <property type="term" value="F:tRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031119">
        <property type="term" value="P:tRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02570">
        <property type="entry name" value="PseudoU_synth_EcTruA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.660">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00171">
        <property type="entry name" value="TruA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001406">
        <property type="entry name" value="PsdUridine_synth_TruA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020097">
        <property type="entry name" value="PsdUridine_synth_TruA_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020095">
        <property type="entry name" value="PsdUridine_synth_TruA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020094">
        <property type="entry name" value="TruA/RsuA/RluB/E/F_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11142">
        <property type="entry name" value="PTHR11142"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01416">
        <property type="entry name" value="PseudoU_synth_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001430">
        <property type="entry name" value="tRNA_psdUrid_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00071">
        <property type="entry name" value="hisT_truA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="PseudoU_synth_1" evidence="8">
        <location>
            <begin position="9"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="PseudoU_synth_1" evidence="8">
        <location>
            <begin position="145"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4 5">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 6">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001430-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001430-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="261" mass="29639" checksum="D360D74BA73807B6" modified="2011-01-11" version="1">MRNLCMKVNYDGTHYDGFQTQPSGNTIQDCLENAIYSLTGERLKITGSGRTDAGVHAYGQVFNFHTESPIPIHRWCLALNAWLPRDIIVTDAREVPLSFHARRMAKRKTYRYSINANRFPDIFHRRTQAHHPTNLDVRAMEKGLAHLVGTFDYTSFASRRSQKTNHVRTIYEAYITVDHSFSRPGSDDQGIIHTYITGSGFLQHMVRIIMGTLLEVGEGKKSPDDIPSILEAKNRSKAGPTAVGHALTLWNVEYEENIKKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E722</accession>
    <name>E3E722_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Elongation factor G</fullName>
            <shortName evidence="7">EF-G</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fusA</name>
        <name evidence="9" type="ORF">PPSC2_22450</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58724.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324746.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09915"/>
    <dbReference type="EnsemblBacteria" id="ADO58724">
        <property type="protein sequence ID" value="ADO58724"/>
        <property type="gene ID" value="PPSC2_22450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4759"/>
    <dbReference type="eggNOG" id="COG0480">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002794_4_1_9"/>
    <dbReference type="OrthoDB" id="88967at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16262">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01434">
        <property type="entry name" value="EFG_mtEFG1_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03713">
        <property type="entry name" value="EFG_mtEFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00054_B">
        <property type="entry name" value="EF_G_EF_2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041095">
        <property type="entry name" value="EFG_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009022">
        <property type="entry name" value="EFG_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035649">
        <property type="entry name" value="EFG_V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004540">
        <property type="entry name" value="Transl_elong_EFG/EF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005517">
        <property type="entry name" value="Transl_elong_EFG/EF2_IV"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14492">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03764">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00889">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00484">
        <property type="entry name" value="EF-G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7 9" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="6 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="8">
        <location>
            <begin position="8"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="17"/>
            <end position="24"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="81"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="135"/>
            <end position="138"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58724.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="692" mass="76338" checksum="C0B11D740D12C770" modified="2015-05-27" version="2">MAREFSLKNTRNIGIMAHIDAGKTTTTERILFYTGRTHKIGEVHEGAATMDWMEQEQERGITITSAATTAAWKGHRVNIIDTPGHVDFTVEVERSLRVLDGAVGVFSAKEGVEPQSETVWRQADRYGVPRIAYVNKMDIIGADFLNVVADMRDRLQANAVAIQLPIGAENDFLGIIDIVGQKAYMYKDDLGQNIEETEIPAEYKDKVEELRNELIEKVAELDEDLTMKYLEGEEITVEEIKAALRKGVVEVKIFPVICGSSYRNKGVQLMLDAVVDYLPAPIDVPSIQGHLEDGTEVERHSSDEEPFSALAFKIMTDPYVGKLTFFRVYSGVLQSGSYVLNATKGKRERIGRILQMHANSRQEITEVYSGDIAAAVGLKDTGTGDTLCDEKNPVILESMNFPDPVIEIAVEPKTKADQDKMAVALGKLTEEDPTLRASTNEETGQTILAGMGELHLDIIIDRMRREFKVETNVGKPQVAYRETFRAPARVEGKFVRQSGGRGQYGHVWVEFEPLEAGTGSQFESKVVGGSVPREYIGPALAGIEEQMKNGVLAGFPLVDVKATIVDGSYHDVDSNEMAFKIAGSMALKAAKDKCKPVLLEPIMKVEVTVPEEYMGDVMGMLNSRRGRIEGMDSRGGAQIIRAMVPLSEMFGYSTTLRSGTQGRGVFSMELHHYEEVPKSIAEEIVAKTKGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7F5</accession>
    <name>E3E7F5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_24505</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373699.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11980"/>
    <dbReference type="EnsemblBacteria" id="ADO59166">
        <property type="protein sequence ID" value="ADO59166"/>
        <property type="gene ID" value="PPSC2_24505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5191"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_0_9"/>
    <dbReference type="OMA" id="EINPHFL"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="348"/>
            <end position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="619" mass="70351" checksum="B7E5E7A29278389E" modified="2011-01-11" version="1">MCTLSKGAVIMMSGRVGTILRSMWKRITQKLVNKLILLFTSVIILVVGSLTIISYQMIEKESVNHSIASTTNNLLLVNQNLEDYLEGMQQLALPQLRYNDIMNAIANENRDYAARMVIENYLRNMFYSRNDLEAIYLYVADRHQYYVVTRETYNITVRKGINTDLPKLPWYKEAMASTANESFQSFVESRSDMGYVAPQASFMAYHRVLRSIASRHPQAVLSFYYNTSAVDEIMRNIPLGKGDQLMLISPERVPFYVNSLPLYERMRDSGVLAQIGEGGSGQVTWSDSNSNQEYLVVYDAGQKDGWQLIKPIPYRQIYEAATTTRNWSYVIGALFLGVSIILVTLTSNAITRPLHKLSTQMKRFSTGDFEARAPVKGHDEIAYLSLHFNEMVQRTEELINERYRMKLVEKNAILKALEAEINPHFLYNALQAISTQALKREMFDMADMVDALAQTLRYSINGKDIVAACEELRHIERYIGLQKARFGARLRVEVVWEDTLMELPIPRLSVQTLVENSIKHALEKVSSDILIVISAESGATDATIAVRDNGPGISEDKLKVVLDSFDEKWEDRESEHIGLKNLNTRLKLLYGDQAGLFILTDETGTEMRMQIPRGGVSHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7I0</accession>
    <name>E3E7I0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4173 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_24620</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373724.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12095"/>
    <dbReference type="EnsemblBacteria" id="ADO59191">
        <property type="protein sequence ID" value="ADO59191"/>
        <property type="gene ID" value="PPSC2_24620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5216"/>
    <dbReference type="eggNOG" id="COG0810">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025121_1_1_9"/>
    <dbReference type="OMA" id="YALTYWR"/>
    <dbReference type="OrthoDB" id="1213947at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025231">
        <property type="entry name" value="DUF4173"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13777">
        <property type="entry name" value="DUF4173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="160"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="212"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="305"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="336"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="374"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="404"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4173" evidence="2">
        <location>
            <begin position="268"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="504" mass="57228" checksum="A9D2A59DCD15D914" modified="2011-01-11" version="1">MHDKMSGSSLPKASLLSAFAGAIVLALVHQYLFFGHGLGVSMPIFVIVFYVYMYSFNRDSCRPVSWIGRLLFVVIMMLALTYVLFDNPIFYVLNALAIAALISVHMVLLFGEKRHGWSEVGIIGQALSHWFYQNFRHIVTPFRMFKTAAFRNVKDERKRVLGKVIIGLLIALPLLLIILSLLASADGMFEKLLSGIPAWIGTLTFGSGLPRLIWTCFFTFCFFCYLWGFVQPAPRNTEREAQPAVAVPYHEPVAIKFDPVITATVLIVMNLVYVVFVVLQFGYLFGAWEGALPEGTSYAEYARRGFGELVMVTGINFVLMISVLKWTEFGSGIVQTLNSGLLYILVGCSGVMLYSGYTRLVMYEEAYGYTYIRYLVHAFMIFLGLLLLVAAVRIHVRQLPLAKYYIVLALIAYVVVNYVGIDVRIAENNLERYRTTSVIDKEYLSELSADAIPLLIDFSRKEHGALDEFLQARLMSMTREESNWPEFNWAKYRAQQELHDYILE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7J7</accession>
    <name>E3E7J7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fe3+-hydroxamate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yxeB11</name>
        <name evidence="3" type="ORF">PPSC2_13290</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371405.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00980"/>
    <dbReference type="EnsemblBacteria" id="ADO56802">
        <property type="protein sequence ID" value="ADO56802"/>
        <property type="gene ID" value="PPSC2_13290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2832"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_0_1_9"/>
    <dbReference type="OMA" id="RIIMLVY"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168680" evidence="1">
        <location>
            <begin position="25"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="2">
        <location>
            <begin position="70"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="37194" checksum="D8A775FCE7DA2AE0" modified="2011-01-11" version="1">MQQKYSLKWGIMLGLGVFLMVVLAACGNAASNNQTNEKSGTDALNGQSQSVAMREYVDATGKKVSIPANPQRVVTTQYLDAMLALGVKPVGVASHVLEGDYLKGKIDGIADIGNPTNVEKVLELQPDLIIATEDTPPEVKEQLEKIAPTVAVSFGDGDVFKQLRDVAAVLGKDKEAEQWIASFDKKAEEGRKKLAGKFKKDETITIYMTYGKDVLRVYGARNVGHVIYRSLELNPPEYIRQKLAKDPRFNYVYDVISMEKLPELSGDRIIMLVYDEASKDGMLKQIEQSALWKNLPAVKNHKMYFIKADPWFTYSPLAIDQSLDEAIKMLSVDPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T1</accession>
    <name>E3E7T1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56964.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599966.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01705"/>
    <dbReference type="EnsemblBacteria" id="ADO56964">
        <property type="protein sequence ID" value="ADO56964"/>
        <property type="gene ID" value="PPSC2_14050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3000"/>
    <dbReference type="eggNOG" id="COG2100">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071824_0_0_9"/>
    <dbReference type="OrthoDB" id="1311927at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56964.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="33540" checksum="FE85CE3A1810B854" modified="2015-05-27" version="2">MRSTLYYRGSLTSCNYACPYCPFSKNVDSRETLNKDRAQLERFADWVREQGALGHQLSIFFNPYGEALIHSWYRKAMIEFSHMAHVEKVAVQTNLSAKLDWTNELNPDTAALWATYHPGETKEQAFISQAMKLYELGISYSVGTVGLRQAFPAIRSLRAQLPKEVYMWINAYKDQPHYYTDAEVAELTEIDPYFQWNLKDYSSQGRACRAGEDVFYVQGDGRVKHCYQDRRVIGHLYRDGLEGLSAQRPCRMKECGCYIGYIHMEEQPFREMYGSGLLERVPRTTMTIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T2</accession>
    <name>E3E7T2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Coproporphyrinogen III oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">hemN1</name>
        <name evidence="6" type="ORF">PPSC2_14055</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371565.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01710"/>
    <dbReference type="EnsemblBacteria" id="ADO56965">
        <property type="protein sequence ID" value="ADO56965"/>
        <property type="gene ID" value="PPSC2_14055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3001"/>
    <dbReference type="eggNOG" id="COG0635">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027579_7_1_9"/>
    <dbReference type="OMA" id="SMRMFRA"/>
    <dbReference type="OrthoDB" id="1130951at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034505">
        <property type="entry name" value="Coproporphyrinogen-III_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13932">
        <property type="entry name" value="PTHR13932"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="5">
        <location>
            <begin position="77"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="475" mass="54111" checksum="512DF674AD9A865B" modified="2011-01-11" version="1">MKAMNLNHLHPMGAATQTSPGMDTKLVTTRFQWPDTPVEWARTIREAPYRSYLYSYPHKTAYRSFDTPLSLQELWEKEELESYFLYMHIPFCAARCGFCNLFTLPDKRQDVHKEYVDALERQARQWAPIMGGRPFSRFAIGGGTPTLLEAPLVERLFDIAENIMGLDPKRASISVETSPDTVTEDRLEVLKRRGTDRVSMGIQSFVESESAAIYRPQKPKLVREALERLVEYNFPLLNVDLIYGLPGQTVETWLYSLEEALSYSPGEIFLYPLYIRENTILKPGYTGLDHDIRLSLYEVARERLKQAGYVQYSMRRFAKNEGTSSKELLPYSCQEEGMAGLGCGARSYTRDVHYASRYGVSTAATRSIIADYVAAERHDLADYGFILNADERKRRFILKALLHREGLELCAYAERFGVCLEDDFTGMSLLLESGMAVVEEGTLRLTEEGMAYSDAIGDWMISTSVRERMEGYVGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7X4</accession>
    <name>E3E7X4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Aspartate ammonia-lyase</fullName>
            <ecNumber evidence="4">4.3.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">aspA1</name>
        <name evidence="4" type="ORF">PPSC2_14255</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.3.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01910"/>
    <dbReference type="EnsemblBacteria" id="ADO57007">
        <property type="protein sequence ID" value="ADO57007"/>
        <property type="gene ID" value="PPSC2_14255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3043"/>
    <dbReference type="eggNOG" id="COG1027">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021594_4_1_9"/>
    <dbReference type="OMA" id="RIATIWN"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008797">
        <property type="term" value="F:aspartate ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018951">
        <property type="entry name" value="Fumarase_C_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10415">
        <property type="entry name" value="FumaraseC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lyase_1" evidence="2">
        <location>
            <begin position="2"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="FumaraseC_C" evidence="3">
        <location>
            <begin position="396"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="462" mass="49715" checksum="3AB18B54B4402365" modified="2011-01-11" version="1">MEIPAEALYGIHTARAMNNFAVSGRPVNRNLIQALVLVKKTAAQVNGEQKRLPTHRVSAIVNACDELLAGRHQDMFTVDAMQGGAGTSTHMNVNEVIANLAIVQLGGQPGQYELVHPLDDVNCCQSTNDVYPTALRIAAIRLLRPLCDTLSSLQNTLQQKEIEYADLLKLGRTQLMDALPMMAGQGFGAYAKAIARDRWRLYKAEERLREIPIGGTAIGTGMNAPRAYSYRMVEKLADETGLGLCRSDHPMDPIQNMDVFVEVSGLLKSAAVNLLKISGDFRLLASGPFGGIGEYMLPPVQAGSSIMPGKVNPVMAEMAGLTAMRVMANDAAITMAAASGQLELNAFLPLIAESLLESLHILSNAVQLFEERCVRGLIVHEERCSANLHSSAVMASALVAELGYDEAASIASAAIAQGRSPEDIAEDRGQLTRARIDQLCHPYTVTKPGIPGQEEGNHHGNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y3</accession>
    <name>E3E7Y3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nitrilase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">niT2</name>
        <name evidence="3" type="ORF">PPSC2_14300</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the carbon-nitrogen hydrolase superfamily. NIT1/NIT2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371615.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01955"/>
    <dbReference type="EnsemblBacteria" id="ADO57016">
        <property type="protein sequence ID" value="ADO57016"/>
        <property type="gene ID" value="PPSC2_14300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3053"/>
    <dbReference type="eggNOG" id="COG0388">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030130_3_1_9"/>
    <dbReference type="OMA" id="GNTYRES"/>
    <dbReference type="OrthoDB" id="1650683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001110">
        <property type="entry name" value="UPF0012_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01227">
        <property type="entry name" value="UPF0012"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="2">
        <location>
            <begin position="9"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="272" mass="30541" checksum="E97D7E813D68A3E3" modified="2011-01-11" version="1">MTYQEAQPFGVALIQAHIEIGNPPENHSHIRSLMEQAVKAEQKPDLIVLPEMWNTGYALDRIHELADEEGTETRAWIAAFAATHQVNVVAGSIAEKKSDGHVYNTMLVFDRTGKEIASYSKIHLFRLMDEEKYLQPGEEKVVFALDGGIQAGASICYDIRFPELARSLALSGANLLIVPAEWPHPRLHHWRTLLTARAIENQMYVIACNRVGRSGDTDFFGHSLIIDPWGEMIAEGGEQEQILTGSIESALVQDVRGRIPVFEDRRPLLYDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E917</accession>
    <name>E3E917_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_24750</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373757.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12245"/>
    <dbReference type="EnsemblBacteria" id="ADO59224">
        <property type="protein sequence ID" value="ADO59224"/>
        <property type="gene ID" value="PPSC2_24750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5246"/>
    <dbReference type="eggNOG" id="COG4872">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4929">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_364029_0_0_9"/>
    <dbReference type="OMA" id="QIYNSHA"/>
    <dbReference type="OrthoDB" id="252275at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018677">
        <property type="entry name" value="DUF2157"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025513">
        <property type="entry name" value="DUF4401"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025833">
        <property type="entry name" value="GDYXXLXY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09925">
        <property type="entry name" value="DUF2157"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14351">
        <property type="entry name" value="DUF4401"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14345">
        <property type="entry name" value="GDYXXLXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="125"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="208"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="233"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="257"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="313"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="341"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="365"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="389"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="412"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="442"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="472"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="494"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="522"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="545"/>
            <end position="566"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="587"/>
            <end position="608"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2157" evidence="2">
        <location>
            <begin position="14"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4401" evidence="3">
        <location>
            <begin position="507"/>
            <end position="568"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="748" mass="85215" checksum="7BC064B41E76DA70" modified="2011-01-11" version="1">MNSMLRFNAIRTGYLLGISLILAAIIYFFASNWGGLDRTVKIVLAVALIVLFYGLSFVFARIRAVPGQQAFLSNIFLVAGCVAFGVSVALLGQIYNSHADSYGLFFIWSVPALLLSWITRYNPLYMLSYVLIHLGVWLYFYPTMQSPSYSQLESLSIAGVFAIFNLVLFLLTFLHRIHSAPLQYMSFTVLHIAMLAMTNSFAFDGYGLIMNIPHIAVIALGFYIFIKVRLNKTLLTLNALALSAFAVFKFIELAETYSSSLFFVFGLIFVALLLTGNVWFFRYLNRLGKPSPDETAVPEEHSSEWITKTVSRIIKVVGVLIGSISLIGLIMISTNVNHTEYVLLGVSLLLMITMIVIPESKLDPVIRYTLLTISYITGLAAILWSDQTLLSVLFLIVSIAGWFRSKGKRQRFFAYTFVNLNMATVLFQQYQEWDGWNWTYKFIIFALFALNAVLYGLSYFRPKTELKGHLRDSSLFFSLLFLFWTTFFEDVIPHSYMFMNIFYFVIVTWMVFAFIRHKQKSEAITSVVFWFIFIGFKYYDLLWTLLYKSFTLALLGIIILGITWWFDRRMAHSGKTAFDADHRSFSFMRLSPLLIAIVIVLQLGIIGYQTARSETLLATGASVKLKLAPIDPRSLLQGDYVALNYDISTPPSKNPLQEKDWNRGKVKVVLTPDSQGVYIADRLYQDGEKLAHHEIVLNGQWNGSRILYGIENYFIPEGTGRTVEQNAHYAYIRVSRNGDALLERLVES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3E958</accession>
    <name>E3E958_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">PhoB family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">bceR</name>
        <name evidence="9" type="ORF">PPSC2_24930</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373798.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12425"/>
    <dbReference type="EnsemblBacteria" id="ADO59265">
        <property type="protein sequence ID" value="ADO59265"/>
        <property type="gene ID" value="PPSC2_24930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5283"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_3_9"/>
    <dbReference type="OMA" id="QIISEVW"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="3"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="127"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="127"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="27008" checksum="BAB78C2ECBAD70D0" modified="2011-01-11" version="1">MFKILLIEDDETLFHEIKDRLTQWAYDVYGIQDFSKVIQEFTTIKPDLVVIDIQLPKFDGFHWCRMIRSHSNVPIIFLSSRDHPTDMVMSMQLGADDFIQKPFHFDVLIAKIQATLRRVYNYNTEPVSLKTWRGATVDYEKNVVANEAGSIELTKNEIFILKLLIEQKNKIVAREELIKSLWDDERFVSDNTLTVNLNRLRKKLDELDLGRFIETKVGQGYMATEEAPAYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E982</accession>
    <name>E3E982_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">4'-phosphopantetheinyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sfp3</name>
        <name evidence="3" type="ORF">PPSC2_15910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371941.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03605"/>
    <dbReference type="EnsemblBacteria" id="ADO57355">
        <property type="protein sequence ID" value="ADO57355"/>
        <property type="gene ID" value="PPSC2_15910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3396"/>
    <dbReference type="eggNOG" id="COG2977">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082087_1_0_9"/>
    <dbReference type="OMA" id="FANFAQY"/>
    <dbReference type="OrthoDB" id="1542506at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008897">
        <property type="term" value="F:holo-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008278">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037143">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01648">
        <property type="entry name" value="ACPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56214">
        <property type="entry name" value="SSF56214"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACPS" evidence="2">
        <location>
            <begin position="124"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="28461" checksum="CAF31A6431C25E2C" modified="2011-01-11" version="1">MVLYTEQLILTREDIVMKAAVSFVHAVCHAGASLDPEIFHSDECSYFESLLFQRRKSNFLLGRLSAKQAASLLLSESNLSNISVETGVFGQPLLRTTGAPGYQVSIAHCDDIGTAVVFPEAHPMGVDIERISPNRNKTMESQLTMEERERIVAVRGVEEYSVLLTVSWTVKEAISKILRTGFAASLQVLEINEIRFKSGCFQSTFSHFPQYAAQSYRLGNYIFTIVAPRKTEWSMNMSRLYEQFNSIFHPSCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA66</accession>
    <name>E3EA66_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Protoheme IX farnesyltransferase</fullName>
            <ecNumber evidence="8">2.5.1.141</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Heme B farnesyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Heme O synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ctaB</name>
        <name evidence="10" type="synonym">cyoE</name>
        <name evidence="10" type="ORF">PPSC2_20590</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>(2E,6E)-farnesyl diphosphate + H2O + heme b = diphosphate + Fe(II)-heme o</text>
            <dbReference type="Rhea" id="RHEA:28070"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="ChEBI" id="CHEBI:60530"/>
            <dbReference type="ChEBI" id="CHEBI:175763"/>
            <dbReference type="EC" id="2.5.1.141"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8">Porphyrin-containing compound metabolism; heme O biosynthesis; heme O from protoheme: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Interacts with CtaA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="8">Carbon 2 of the heme B porphyrin ring is defined according to the Fischer nomenclature.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.141" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372928.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07845"/>
    <dbReference type="EnsemblBacteria" id="ADO58358">
        <property type="protein sequence ID" value="ADO58358"/>
        <property type="gene ID" value="PPSC2_20590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4391"/>
    <dbReference type="eggNOG" id="COG0109">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029631_0_0_9"/>
    <dbReference type="OMA" id="PPLMGYC"/>
    <dbReference type="OrthoDB" id="1875497at2"/>
    <dbReference type="UniPathway" id="UPA00834">
        <property type="reaction ID" value="UER00712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008495">
        <property type="term" value="F:protoheme IX farnesyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048034">
        <property type="term" value="P:heme O biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13957">
        <property type="entry name" value="PT_UbiA_Cox10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00154">
        <property type="entry name" value="CyoE_CtaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006369">
        <property type="entry name" value="Protohaem_IX_farnesylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030470">
        <property type="entry name" value="UbiA_prenylTrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43448">
        <property type="entry name" value="PTHR43448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01473">
        <property type="entry name" value="cyoE_ctaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00943">
        <property type="entry name" value="UBIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="38"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="61"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="106"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="135"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="159"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="185"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="234"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="257"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="291"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="35076" checksum="336667C2540695B1" modified="2011-01-11" version="1">MDNISYKTSSDAATYSVKSKPPGKAGTWKDFITVTKPGILRTNLVAAFGGFWLASQWDVDYIKLILTLLGTMLVMASSCVFNNYFDRELDLKMERTRNRSLPTGRLTPTTVLSYAIILGIVGLAVLFSFSGVKAGLLGILGMIVYVGIYTLWLKRSSTWSTSIGGISGAMPPVIGYVAASGRIDMGAWLLFALLFLWQPPHFWALAIRRVEEYRAAGFPLLPVVKGIHRTKIQMIPYIVLLIPVPILMYAYGYAGMIFMIVSVLLSVLWAFYAFKGFTIKEEETDSWAKKVFFFSINHLTLSFLLMIVDTVHKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAK4</accession>
    <name>E3EAK4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">UDP-phosphate glucose phosphotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PPSC2_22645</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial sugar transferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373301.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10120"/>
    <dbReference type="EnsemblBacteria" id="ADO58762">
        <property type="protein sequence ID" value="ADO58762"/>
        <property type="gene ID" value="PPSC2_22645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4796"/>
    <dbReference type="eggNOG" id="COG2148">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024920_0_1_9"/>
    <dbReference type="OMA" id="NWSVLFD"/>
    <dbReference type="OrthoDB" id="1759731at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003362">
        <property type="entry name" value="Bact_transf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017475">
        <property type="entry name" value="EPS_sugar_tfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017473">
        <property type="entry name" value="Undecaprenyl-P_gluc_Ptfrase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02397">
        <property type="entry name" value="Bac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03025">
        <property type="entry name" value="EPS_sugtrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03023">
        <property type="entry name" value="WcaJ_sugtrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="82"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="286"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_transf" evidence="8">
        <location>
            <begin position="281"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="54538" checksum="66D097E2895E3930" modified="2011-01-11" version="1">MIRRNQRFLTQLYIVADFAVIQLSFLIAWFFKFESEWITYKEPLPIQVYGGWSLIYGLIAVVLGMLFSLYSPKRKKRFADDVFRVTQIHIVGLFVLLSVMFFVKQIDISRSYLAIYMVGNVLIILFYRYFLKQILKILRQKGYNKQFMLILGAGSLGQRFYHNLGQYPDLGYEVVGFLDDKRHWNEEEEAHFRPILGGLDQLEATLSRLMIDEVILALPLDAHDKYPKIINMCEKAGVRTLIIPDFFDYLPARPYFDNFAGMPMINVRDIPLDVAGNRLFKRLFDILFSLFAIILTSPIMLAVAIGVKVTSRGPIIFKQERVGLNRRTFRMYKFRSMRVLPPGTEDTGWTTANDPRRTRFGTFIRKTSLDELPQFFNVLLGDMSVVGPRPERPYYVDQFREEIPKYMVKHHVRPGITGWAQSNGLRGDTSIEERIKHDIFYIENWSLLFDIKIIFRTIRNGFKNAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAM8</accession>
    <name>E3EAM8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spo0E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spo0E</name>
        <name evidence="2" type="ORF">PPSC2_22765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373325.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4845"/>
    <dbReference type="EnsemblBacteria" id="ADO58786">
        <property type="protein sequence ID" value="ADO58786"/>
        <property type="gene ID" value="PPSC2_22765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4820"/>
    <dbReference type="eggNOG" id="ENOG50306AP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2667675_0_0_9"/>
    <dbReference type="OMA" id="YSDWKYS"/>
    <dbReference type="OrthoDB" id="1952803at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043937">
        <property type="term" value="P:regulation of sporulation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018540">
        <property type="entry name" value="Spo0E-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037208">
        <property type="entry name" value="Spo0E-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09388">
        <property type="entry name" value="SpoOE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140500">
        <property type="entry name" value="SSF140500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="3"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="9219" checksum="61EF0D1117CB6A54" modified="2011-01-11" version="1">MKWQQLEECIEEKRKELNDLAKEVGLKDRRVLTKSMELDRLLNKYSDWKYSYRRQQSVLQSSQIQEKQHELVLSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAR2</accession>
    <name>E3EAR2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ubiB</name>
        <name evidence="3" type="ORF">PPSC2_23630</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373512.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11135"/>
    <dbReference type="EnsemblBacteria" id="ADO58976">
        <property type="protein sequence ID" value="ADO58976"/>
        <property type="gene ID" value="PPSC2_23630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5002"/>
    <dbReference type="eggNOG" id="COG0661">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006533_0_2_9"/>
    <dbReference type="OMA" id="RRDYKRV"/>
    <dbReference type="OrthoDB" id="678616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="497"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="531"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="2">
        <location>
            <begin position="123"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="556" mass="62931" checksum="DD4B24CB899EA1A8" modified="2011-01-11" version="1">MAVRMKHAGRYREIAMALARHGFGYMVEEMGLFQLLSLPRKWLTRETPESKTLGERIRLVLEDLGPAFIKLGQLASTRADLLPEPIIRELVKLQDQVPPFSPETARGILEQELDTSLENILVRFDDDPLAAASIGQVHLGKLHSGEMVAIKIQRPGVNRIIRRDLDILRELTAMAAKRWEWVERYQLRQMVEELGRSLIQELDYNHEARNTEKIALQFEQDPHIYIPKIYWDHTSSRILTMEFLDGTHLGSREELLHRGYNLKELAQRLVNSMLHQIFIEGFFHADPHPGNLLVLRNGSLAYLDFGMAGRLSEEMKNHLASLMIALMRKNTDAMVRAIERLGLVDPDADLNALRADLDKIREDYSDVPFSQVSIGDALNDLFGAAQRHRIGLPSDVLLLGKALLTLEGVVEHLDPDLSIIALAEPFGNKLLKERFSGRRIRGKLLGGATELVETLMELPRQTRHLASIISKGKLKLEVTVPELEQLLRKLDQISNRLSFSIVLLAFSIIMVGLIIGSSLNHQATMLWNVPAIEIGFVVALLMVAFLLYSIFKSGRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAW8</accession>
    <name>E3EAW8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/putrescine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potC3</name>
        <name evidence="7" type="ORF">PPSC2_23895</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013312456.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11400"/>
    <dbReference type="EnsemblBacteria" id="ADO59032">
        <property type="protein sequence ID" value="ADO59032"/>
        <property type="gene ID" value="PPSC2_23895"/>
    </dbReference>
    <dbReference type="GeneID" id="66575293"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5056"/>
    <dbReference type="eggNOG" id="COG1177">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_3_1_9"/>
    <dbReference type="OMA" id="LGGTKWI"/>
    <dbReference type="OrthoDB" id="1264541at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="129"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="187"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="230"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="62"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="29146" checksum="A0FF91531B0CF516" modified="2011-01-11" version="1">MREKHYGLGFFSLLVFIFLLGPLLIISVTSFEPGTVLKFPPQGFSLRWYENIFEVDLFMSTFKTSIVVSLLGNILALLIGMPAAYALSRFSFRGKDALNALFLSPLLIPGIVLGFTLLRYLIIVYHLPVYAGLLIGHTVIMLPFIIRVIASSLSNFDFAIEEAALSLGAGRLETFFKVVLPNIRSGIIAAILIAFLESFNNVDISVFMTGPGFSTLPIQMLTYVENYFDPTIAAISVMLMILTGILMFLIERLMGLSYFTKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF3</accession>
    <name>E3EBF3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Arsenate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">arsC3</name>
        <name evidence="1" type="ORF">PPSC2_21945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373193.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4681"/>
    <dbReference type="EnsemblBacteria" id="ADO58627">
        <property type="protein sequence ID" value="ADO58627"/>
        <property type="gene ID" value="PPSC2_21945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4669"/>
    <dbReference type="eggNOG" id="COG0394">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2918381_0_0_9"/>
    <dbReference type="OMA" id="ENKCPIT"/>
    <dbReference type="OrthoDB" id="1800563at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="7105" checksum="FB994A6079683EDC" modified="2011-01-11" version="1">MTLCGDAENKCPITPPRVRREHWGFDDPAKARGTEEEQWSVFQRIRDEVGTRIRKFAETGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBG0</accession>
    <name>E3EBG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Pectin esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pel3</name>
        <name evidence="6" type="ORF">PPSC2_21980</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373200.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09130"/>
    <dbReference type="CAZy" id="PL1">
        <property type="family name" value="Polysaccharide Lyase Family 1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58634">
        <property type="protein sequence ID" value="ADO58634"/>
        <property type="gene ID" value="PPSC2_21980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4675"/>
    <dbReference type="eggNOG" id="COG3866">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4677">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_256272_0_0_9"/>
    <dbReference type="OMA" id="KYGPNTY"/>
    <dbReference type="OrthoDB" id="558757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045330">
        <property type="term" value="F:aspartyl esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030599">
        <property type="term" value="F:pectinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042545">
        <property type="term" value="P:cell wall modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033131">
        <property type="entry name" value="Pectinesterase_Asp_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000070">
        <property type="entry name" value="Pectinesterase_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01095">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00503">
        <property type="entry name" value="PECTINESTERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0063">Aspartyl esterase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168116" evidence="4">
        <location>
            <begin position="31"/>
            <end position="1102"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase" evidence="5">
        <location>
            <begin position="809"/>
            <end position="1094"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="433"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="435"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="962"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1102" mass="120933" checksum="45BA43F73D8B11D4" modified="2011-01-11" version="1">MSKQRTWRKVLCNVVVGSLLLTLCPPLIQAETAVGTEMAKVEKIATNIPAFPGAEGGGKYVTGGRGGEVYEVTTLEDYGKGEQMIPGSLRAAVSSDNRTVVFRVGGTIHLKEPLKILGNNLTVAGQTAPGDGITVSDYTTGIDADNVILRYLRFRLTDRYPSEDDALGSRYHKNIMIDHCSFSWSVDEVLSLYDNVNTTVQWSIASESMLMTTHQKGRHGYGGIWGGRNSTYHHNLLAHNASRNPRFPTDKKQIDAVEMTNNVIYNWGFFSSYGGGEGSYNVLNNYYKYGPNTYKDVRGQIFVDVGSKKYKTRIYIGGNYMYGNESVTKDNWQLGTSIGSIIDPSTRLAEPIEVRGEYDNGISPDAYGPYQATDAQTAYTEVLAGSGATLPRRDAVDARIMNDVKNGTGAFINSPREAGWIYDDYSVTNTELTDSDHDGMPDEWERAHGLDPKNADDRNGQELAGTGEYAHFAKGYTNLEVYLNDLIEKLSNGSEVDNPEAVVQVSDEGGRSLKHNDILEAGRDATITATAKDQDGIAHVEFIIDGKLAGKVENAPYQISWNHVTDGTHYIIARVTDRKGTAAFSNPVTIHVNTTVPTGSWLSEEVGSEGNDGYIKGHTQVLKEDANGSSIRLKSAGDIDGQADLFHYAYQKWEGDGEITARVEKITPVDDNAEAGVMIRESLKPGSKMAFMSLAFVKYGKQGTLISRDQTDGKTKRASMETFITTPYSVRLVRQGQKLTGWISADGLTNWEKVGEAVVDFPENQPLLFGLATDASKQQNDVWNYNTSEFSNVKVRKLTDSGGTSPTSVVVSTYGPADYTSLQAAIDAVPDNSNTRTIIHLKNGTYREKIKVNSSKKNLSIIGEDRDKTIIAFDDTAKTIVDGKELGTSNSYTMRVQSPDFVMENVTVANTEGTGQVQAVALYAEGDRGKYHNVKITGLQDTLLVNRGRQYFKDSYISGSVDFIFGNAPAVFDNSIIHSLRAGYVTAASTEENQPGFVFTQCRLTTEAGLTGKVDLGRPWRPYAHVTFLKTYMDDHIKPGGWNNWGKESNEQTARFGEFDNFGPGAGSSGRVPWAKQLTADEANQYTVEAVLSGTDHWNWRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ3</accession>
    <name>E3EBQ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_23135</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373409.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10620"/>
    <dbReference type="EnsemblBacteria" id="ADO58871">
        <property type="protein sequence ID" value="ADO58871"/>
        <property type="gene ID" value="PPSC2_23135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4900"/>
    <dbReference type="eggNOG" id="ENOG5032Y5Z">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117097_0_0_9"/>
    <dbReference type="OMA" id="MVRGGYT"/>
    <dbReference type="OrthoDB" id="2009358at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168123" evidence="2">
        <location>
            <begin position="32"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="19794" checksum="57D9AEDC602A030D" modified="2011-01-11" version="1">MKSRYKVSLAAVLLGGGIVAGSLMNNSVNGAPSSGQPGTADDPVVTKSYVDQKIAQAIKGGGSASSTSSKATSSTAPATNTTTSNTTTSSGTSNATKSSTVEQTEALKVVDVKPGQKLIAKAGAEFILRNGNAVVYSMDASGAIDITSGTEIVHNQAVEKNHLLSFPREGRGIQVKEGQKYGLVVMVRGGYTVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC49</accession>
    <name>E3EC49_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA modification GTPase MnmE</fullName>
            <ecNumber evidence="6">3.6.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mnmE</name>
        <name evidence="6 9" type="synonym">trmE</name>
        <name evidence="9" type="ORF">PPSC2_25500</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="6">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer. Heterotetramer of two MnmE and two MnmG subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.-.-" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373919.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12995"/>
    <dbReference type="EnsemblBacteria" id="ADO59389">
        <property type="protein sequence ID" value="ADO59389"/>
        <property type="gene ID" value="PPSC2_25500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5404"/>
    <dbReference type="eggNOG" id="COG0486">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019624_4_1_9"/>
    <dbReference type="OMA" id="CEIQCHG"/>
    <dbReference type="OrthoDB" id="263682at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04164">
        <property type="entry name" value="trmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00379">
        <property type="entry name" value="GTPase_MnmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031168">
        <property type="entry name" value="G_TrmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018948">
        <property type="entry name" value="GTP-bd_TrmE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004520">
        <property type="entry name" value="GTPase_MnmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027368">
        <property type="entry name" value="MnmE_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025867">
        <property type="entry name" value="MnmE_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12631">
        <property type="entry name" value="MnmE_helical"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10396">
        <property type="entry name" value="TrmE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00450">
        <property type="entry name" value="mnmE_trmE_thdF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51709">
        <property type="entry name" value="G_TRME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0630">Potassium</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TrmE-type G" evidence="8">
        <location>
            <begin position="220"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="22"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="230"/>
            <end position="235"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="249"/>
            <end position="255"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="251"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="255"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="274"/>
            <end position="277"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="458"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="458" mass="50697" checksum="9661F08228014E9F" modified="2011-01-11" version="1">MLSDTIAAIATAVGEGGIAVVRVSGPEAVTEVEALFRSKTPLSKVPTHTVHYGHIIDPQSQEKVEEVLVTVMRAPRSFTTEDVVEISTHGGVVAVKRVMDLLLLQNIRLAEPGEFTKRAFLNGRIDLSQAEGVIDLIRSKSDKAFSMALKQVDGQLSQNIRRLRHVLVETLAHIEVNIDYPEHDVESFTSELIKDKSSQVMAEIDRLLHTAEQGKILREGLTTAIVGRPNVGKSSLLNTLAQGERAIVTDIPGTTRDVIEEYVTINNIPLKLLDTAGIRETMDVVERIGVERSRTAVSEADLLLIVINANEPLHEDEMALMEQIRGRQAIVIMNKMDLPAQIDRDLLLRYVPEELIVPMSVKENEGADRLEQAISNLFFSGKLESADMTYVSNVRHIALLKKARQSLVDAYEAADQLVPIDMIQIDVRLAWEQLGEIVGDTAHDALIDQIFSQFCLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC62</accession>
    <name>E3EC62_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-356</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-356</name>
        <name evidence="2" type="ORF">PPSC2_01110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368848.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0218"/>
    <dbReference type="EnsemblBacteria" id="ADO54205">
        <property type="protein sequence ID" value="ADO54205"/>
        <property type="gene ID" value="PPSC2_01110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.210"/>
    <dbReference type="HOGENOM" id="CLU_2634775_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="7765" checksum="EDD4874983D1234A" modified="2011-01-11" version="1">MPDEYLERIGKTALSAGAALGSGGAGAAIGTVIFPGVGTAVGYLIGIGSGILLGNSLGKKIVDKRRLHNRWITNGSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC70</accession>
    <name>E3EC70_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH_17 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_01145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368856.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0226"/>
    <dbReference type="EnsemblBacteria" id="ADO54213">
        <property type="protein sequence ID" value="ADO54213"/>
        <property type="gene ID" value="PPSC2_01145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.217"/>
    <dbReference type="HOGENOM" id="CLU_140176_12_1_9"/>
    <dbReference type="OMA" id="NTEKLCY"/>
    <dbReference type="OrthoDB" id="2076478at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="1">
        <location>
            <begin position="9"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6825" checksum="EF84289DC2BF4AA9" modified="2011-01-11" version="1">MSNTEKLCYTVAELHDILPLGMNSLYKLVNREDFPKIRVGKKIIIPAKGLKLWLEKQVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECB9</accession>
    <name>E3ECB9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug transporter MatE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yeeO</name>
        <name evidence="2" type="ORF">PPSC2_01375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54262.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675836.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0277"/>
    <dbReference type="EnsemblBacteria" id="ADO54262">
        <property type="protein sequence ID" value="ADO54262"/>
        <property type="gene ID" value="PPSC2_01375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.272"/>
    <dbReference type="eggNOG" id="COG0534">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012893_5_3_9"/>
    <dbReference type="OrthoDB" id="1415498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006603">
        <property type="entry name" value="DinF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="242"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="300"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="331"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="368"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="411"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54262.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="463" mass="50330" checksum="2AD96C9E6C6013EF" modified="2015-05-27" version="2">MSQLSVRMRTHGFLNRHFSGESIDYRQMIALFIPLLIDQAFIVGLNLVNTAMISSSGMAAVSAVNMIDSLNIFLINVFVAVSTGGTVVVAQYKGSGNDLMVSKATSGTISSVSLLALCISLFMILLYNPILSVLFGSASADVLANGKVYLLGSCMSFVGIAIVEAVCGALRGIGKTRASLALSLIMNLSYVLLNVVFINLLDMGVLGMTIAVNVSRYAGAACALIYLVRVDDDLRVQLRDMLYFNLAMLKKILFIGLPFAAEQMFFNGGKILTQIFIVNLGTNALATNAICSSLANVFQIPANALALTIVTVVGQCMGRRNVHDARKFTKSFIWLSSGSFIVMGLILMPLFKPMVGLFHPPAEIVDDIFMVMLINTLAQIPLWSIAFITPSALRAAGDSKFTSLTSMLSMWLCRVVLGYVLGIVFNLGIVGVWLAMDIEWGVRGIVFLWRFRGNKWVQHRLID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECC3</accession>
    <name>E3ECC3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acetyl-CoA carboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-419</name>
        <name evidence="1" type="ORF">PPSC2_01395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54266.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14115"/>
    <dbReference type="EnsemblBacteria" id="ADO54266">
        <property type="protein sequence ID" value="ADO54266"/>
        <property type="gene ID" value="PPSC2_01395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.276"/>
    <dbReference type="eggNOG" id="COG3533">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008033_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012878">
        <property type="entry name" value="Glyco_hydro_127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07944">
        <property type="entry name" value="Glyco_hydro_127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54266.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="753" mass="85813" checksum="E9A96F356DECD736" modified="2015-05-27" version="2">MILKAQAFDLHKVSIDSGPLYHAMELNTTYLLSLEPDRLLSRFREYAGLEPKAAHYEGWEARGISGHTLGHYLSGCALMFASTGDKRLLERVNYVIDELEICQNSHGNGYISGIPRGKEIFEEVKAGDIRSQGFDLNGGWVPLYTMHKLFAGLRDAHLLAHHPKALAMEIQLGDWLEDVFQGLSDEQVQQVLHCEFGGMNEVLTDLAEHSGEKRFLNLAERFYHGEVLNDLADSRDTLAGRHANTQIPKIIGAARQFEVTGKPLYADLSRFFWDRVVHKHSYVIGGNSYNEHFGEPGKLNDRLGEGTCETCNTYNMLKLTRHMFEWDAYAAYADYYERAMFNHILASQQPVDGRVCYFVSLEMGGHKSFNSQYEDFTCCVGSGMESHSMYGTAIYFHTANTIYVNQYVPSTVTWDEMNIQLKQETLFPQNGRGTLHLISKEPKFFTIKLRCPHWAEQGMKIKINGEEYAAEACPTSYIVIEREWKDGDTVEYDIPMTVRVEEMPDNPRRIAFMYGPLVLAGDLGPVVQESNEERLLASVLIGSADSLTTKLIADGNETNTFHLNDLGYIRDLQLRPFYQIYDRSYTVYWDLFSKEEWAATEAEYRTALAYQLELERLTVDVVQPAEMQPERDHAFTGEHVGLGSIYNRKYRDTWSGGWFSFVMKVLPDKPVQLAVTYLKDSDRSHRDFDITADGQNLGEGKLKSEEMNKFETFIYELPLSVTNEKNEVTIRFTAQPQGKVARVAGLRVIKSHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECK8</accession>
    <name>E3ECK8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lipoate--protein ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywfL</name>
        <name evidence="2" type="ORF">PPSC2_03960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369416.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16765"/>
    <dbReference type="EnsemblBacteria" id="ADO54780">
        <property type="protein sequence ID" value="ADO54780"/>
        <property type="gene ID" value="PPSC2_03960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.787"/>
    <dbReference type="eggNOG" id="COG0095">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067270_1_0_9"/>
    <dbReference type="OMA" id="VQIYLCI"/>
    <dbReference type="OrthoDB" id="871298at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03099">
        <property type="entry name" value="BPL_LplA_LipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="1">
        <location>
            <begin position="47"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="30355" checksum="2D9FC7226D832908" modified="2011-01-11" version="1">MDHIHSSTEITTALPALQWLEAPLTTTQEDVLFPLAWEELACRQVGKGAAPILHLWRHPGALVIGHRDRRLPNAPQAMERVRSSGTSVCVRPSGGAAVMLDRGVLNLSLILPNPQRAISLHEDFRLMAGLIADALAPWSVEAQTGEIIGSFCPGDYDVSVGGRKFCGIAQRRQAKAYIITAFVMIEGRGAERAQAVQQFYREAAGGTPEGVQEPDYPRVNPATMGSLAELAGVPSVEAYTASLRRVVESRSAILPADGSLVQPEGLAEQMAALRERYDLQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECZ6</accession>
    <name>E3ECZ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Arabinose transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araP</name>
        <name evidence="7" type="ORF">PPSC2_04360</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54865.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17170"/>
    <dbReference type="EnsemblBacteria" id="ADO54865">
        <property type="protein sequence ID" value="ADO54865"/>
        <property type="gene ID" value="PPSC2_04360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.869"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="67"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="208"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="258"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="63"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54865.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="32449" checksum="26DBC1F0C2F248C7" modified="2015-05-27" version="2">MHSSRTAPYVFVLPFLLSFALFFAYPVISTVIMSFQEVLPGITTYVGLENYKDLMNPTFGKAILNSVLYTLLTLVVLIPLPLVLAVLLNSPKMPGRGLFRSVMFIPALTSVVVAGTIFRLMFGELDGSLMNSLLGLFGLEPYKWLMNANTGFLALIVLALWRWLGVNMLYYMSGLQNIPPELYEAAQIDGASRFDSFWRITIPMLKPVTIYVFTISIYAGLSMFTESYMLWNGNNSPNDIGLTIVGYLYRQGLEQNSMGFGAAVGIVLLVFTLVLNLIQLKFFGMFRKED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED02</accession>
    <name>E3ED02_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Iron ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fhuG1</name>
        <name evidence="8" type="ORF">PPSC2_04385</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369505.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17215"/>
    <dbReference type="EnsemblBacteria" id="ADO54871">
        <property type="protein sequence ID" value="ADO54871"/>
        <property type="gene ID" value="PPSC2_04385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.875"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_2_9"/>
    <dbReference type="OMA" id="FGCISIA"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="67"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="124"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="203"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="287"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="318"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="341" mass="35644" checksum="DD17DF5FE7DE7BFC" modified="2011-01-11" version="1">MRRSLGAGDTRTTKAWLVCFVLAGISFAVLVLGLNTGTIRIPPLRVLDTLFGGGSGRDHMVLFEYRLPRIVVTVLAGAGLGAAGAVMQGLSRNALADPGVLGLHAGAALGLVMYVSFFRDLEGSAALFIPLFTFAGGVVAAVLIVMLSYSGSRGIVPVRLILSGIGVASGLSAITLYWSLRLDEDTYAFTARWLAGSVWGRDWIHAVALLPWIVIVLPYVLSQTRSLNNLSLGDETAAGIGTSVKRQRLILLGAAVALSSASVSMAGGIGFIGLIAPHLARRLVGPMYQHLLPVAALVGVVILVTADTMGRSVFQPNAIPAGVVVAVVGAPYFLFLLSRTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED28</accession>
    <name>E3ED28_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YhgF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhgF</name>
        <name evidence="2" type="ORF">PPSC2_06320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55296.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19265"/>
    <dbReference type="EnsemblBacteria" id="ADO55296">
        <property type="protein sequence ID" value="ADO55296"/>
        <property type="gene ID" value="PPSC2_06320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1306"/>
    <dbReference type="eggNOG" id="COG2183">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009833_0_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006139">
        <property type="term" value="P:nucleobase-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05685">
        <property type="entry name" value="S1_Tex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.650">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3500.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041692">
        <property type="entry name" value="HHH_9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044146">
        <property type="entry name" value="S1_Tex"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023323">
        <property type="entry name" value="Tex-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023319">
        <property type="entry name" value="Tex-like_HTH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018974">
        <property type="entry name" value="Tex-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032639">
        <property type="entry name" value="Tex_YqgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006641">
        <property type="entry name" value="YqgF/RNaseH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037027">
        <property type="entry name" value="YqgF/RNaseH-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17674">
        <property type="entry name" value="HHH_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09371">
        <property type="entry name" value="Tex_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16921">
        <property type="entry name" value="Tex_YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00732">
        <property type="entry name" value="YqgFc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="1">
        <location>
            <begin position="662"/>
            <end position="731"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55296.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="740" mass="82091" checksum="66F20D17A4DA73C9" modified="2015-05-27" version="2">MSNEEMKTEIGQEPNEAERQERIVKQVARELSLALKQIRTTISLLDEGNTIPFIARYRKEMTGELDENQLRDIEDRVLYLRNLEDRKVEVIRIIDEQGKLTEELQAAITSAVKLQEVEDLYRPYRQKRKTRASVAKERGLEPLSIWIWGQPKQGDALKEAESYVNAELGVETPESAIQGAMDILAENIADDAAIRQWVRRYTLDHGMLTSEAKDTEQESVYENYYSYRELAKKMPPHRILAINRGEREGILKVGLEVAPDSIYTYVAGQVIKGSSVVEDLLRSVIEDAYKRLIAPSIEREVRAEMTEKGEQQAISIFAGNLRSLLLQAPIKGRRVLGVDPAYRTGCKLAVVDDTGKLLEVAVTYPTPPNNKKREAAETFKQLIAKYDIELIVIGNGTASRETEQFVAEVIADIGDSSLAYLIVNEAGASVYSASKLAQEEFPDLDVAERSAASIARRVQDPLAELVKIEPKAIGVGQYQHDVSQKHLDESLKDVVESAVNHVGVDVNTASSALLSYVAGINATIAKNIVKYREENGKFSNRRQLQKVPRLGAKTYEQSIGFIRIPGGENPLDRTPIHPESYAVVDRLLAELGISAHDLGSKAATEALNVSNIEQLAAKLEVGVPTLRDILDSLQRPGRDPRDELPLPVFRKDVLKIEDLAPGMELQGTVRNVIDFGAFVDIGIKSDGLVHISQLRSGFVKHPMDVVSVGDNVTVWVLNVDLKKGRVGLTMKPPADAQSQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED34</accession>
    <name>E3ED34_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_02120</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369031.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14885"/>
    <dbReference type="EnsemblBacteria" id="ADO54391">
        <property type="protein sequence ID" value="ADO54391"/>
        <property type="gene ID" value="PPSC2_02120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.400"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_1_9"/>
    <dbReference type="OMA" id="EQMASIC"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="2"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="293"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="44906" checksum="E7FCA7E743C37DCF" modified="2011-01-11" version="1">MNILIADDENMIRQGIRRTIGQALPTCGIHLAASTEEAAGILAEHPVDIVLTDILMPGMDGLEFMRISKRKHPHLQWVVISAHSDFQYAQRAVKLGAKDYLLKPIGKKKLLECIEMLAAEALVASQQANEGRLLKSNMVYLREAVFQRYALGLDTGKLDIQPFVENYPEFHLFMVRMEPDHKQTHLEHFMIENVLSELIEAGGSGFVVSLDRHSLLGIARLRDEAEAARLEMLLESHLKRYVRVPLQITRSGVHHNFSSIPEEVARLRRTPEEIAAAAADTGECLRKGMHTVDVALQYIRAHFTEELSLEKVASIVFLNPVYFSQLFKQKTGQGYKDYVISLRMEEAKRLLNDPHLRLADISERIGYQDMRHFTQVFRRKCGMTPTEYRHQGVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED70</accession>
    <name>E3ED70_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Copper resistance protein CopC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">copD</name>
        <name evidence="12" type="ORF">PPSC2_02290</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369067.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15050"/>
    <dbReference type="EnsemblBacteria" id="ADO54427">
        <property type="protein sequence ID" value="ADO54427"/>
        <property type="gene ID" value="PPSC2_02290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.435"/>
    <dbReference type="eggNOG" id="COG1276">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2372">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023176_1_1_9"/>
    <dbReference type="OMA" id="MYKGNAT"/>
    <dbReference type="OrthoDB" id="1753926at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006825">
        <property type="term" value="P:copper ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046688">
        <property type="term" value="P:response to copper ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032694">
        <property type="entry name" value="CopC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007348">
        <property type="entry name" value="CopC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008457">
        <property type="entry name" value="Cu-R_CopD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014755">
        <property type="entry name" value="Cu-Rt/internalin_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34820">
        <property type="entry name" value="PTHR34820"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04234">
        <property type="entry name" value="CopC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05425">
        <property type="entry name" value="CopD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0186">Copper</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168794" evidence="9">
        <location>
            <begin position="33"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="156"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="205"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="254"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="284"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="323"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="363"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="397"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="437"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="domain" description="CopC" evidence="10">
        <location>
            <begin position="31"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="CopD" evidence="11">
        <location>
            <begin position="359"/>
            <end position="452"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF05425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="572" mass="61606" checksum="FEE85E7662F11AFA" modified="2011-01-11" version="1">MLYLSRPARAACLLLLCLPLLLLFPHSSWAHAFVVESSPTENQVLDKSPSQVTITFNEDLQSAFMSIKVTDETGKRVDTGKAQLNPKHPSTMEIQLIPGMKNGIYTITWRALSADGHPVNGVIPFQVGSGSNAYTDQATPSESSGTSRIDLIAVRWLLYIGLSLLFGAICFRLFLLPSINRDKNRSEQKMLNQQPSDTLPRWTKLLWSGYGITSAAILISLPLQASWDAGVSIREGFSLPILGEALQFTGAGKIWFIQMILVLLLSVTLIYAIDPSISNRQRRVWGYSSVLLTLSLMLSKAFVGHPAAATHPAPAIVADFVHLAASAFWIGSLTVMVVCLPVAGSELPVFKQAALRQIALRRFAGWGIAMVAALLATGIYGAVLYLPAPFMLLNTSYGLVLLGKAALLLVMLVFAASQFRSARQAAASKRAAGGLRVELSVGLLVMLLAAVLTHMSPGQAPAVPFEETRTTGEYSVTLAVSPNAVGSNEFKVSVQDSKGTAVSGIQQVTLTLTPADPDQDQQEFVLPVKQQQPFRSQELITSEGTWAVKVHALTASLDAVDAEFTLHVGGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDD6</accession>
    <name>E3EDD6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hsk</name>
        <name evidence="2" type="ORF">PPSC2_04575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369548.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0933"/>
    <dbReference type="EnsemblBacteria" id="ADO54915">
        <property type="protein sequence ID" value="ADO54915"/>
        <property type="gene ID" value="PPSC2_04575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.919"/>
    <dbReference type="eggNOG" id="COG2334">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072586_0_0_9"/>
    <dbReference type="OMA" id="WAHRDLW"/>
    <dbReference type="OrthoDB" id="1003984at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="31"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="38489" checksum="E6898E92D2EE59E8" modified="2011-01-11" version="1">METFSTNEIIQADLMETFHRFFGLNIIESVPIQRGWLNLKWKIATNNGTFLLKQYNKQRYKYYNFDDLLRAFSQQKRLHGLGLACPRLLNHEGQVFMESERRERFLVMEFCPGTLVAPGKANVYQLYELGKATGKMHCLLNDGTLRSKNTPKLVLSSRKERLAHWDSVWKQAKEADKKELLADIETQRKATEMVNIEMIDALTPGWAHRDLWADNVLFNNDMLSAILDFDRLDYDYPQLDIARAVMSFAWDKQLKLPLVSAFMAGYREERAMIEDSLTRSLQWLWYMESVWWINVNMDEHSVPIRFAKEMNWLARNYKVLPDLLADM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDH0</accession>
    <name>E3EDH0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ykoC</name>
        <name evidence="6" type="ORF">PPSC2_04740</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369582.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17635"/>
    <dbReference type="EnsemblBacteria" id="ADO54949">
        <property type="protein sequence ID" value="ADO54949"/>
        <property type="gene ID" value="PPSC2_04740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.952"/>
    <dbReference type="eggNOG" id="COG0619">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056469_6_1_9"/>
    <dbReference type="OMA" id="IITLAYY"/>
    <dbReference type="OrthoDB" id="1479665at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003339">
        <property type="entry name" value="ABC/ECF_trnsptr_transmembrane"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02361">
        <property type="entry name" value="CbiQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="223"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="30469" checksum="F47FD5403714E2C0" modified="2011-01-11" version="1">MSLSFPHHETWLHRVNPGLKLVMFSLLFVIVIVIHDPNVMFNVACAMLLLLVWSGHPWKRLLLYGSPFILVFISTSTGMMMFGKGVTTWWTWGLIHITQESFFRGMHLGFRALSMAAAGLLFGLTTRPVSLFYSLMQQWKLPPKYAYSFLAAMRLMPMMLEEFQALRHAHRIRGLHQHVSKWNMYATLRRYAIPLLAQSIRRAQRIAIAMEAKGFANETKRTYYYAIGYSAVDIIFIFYFVVLLMLAWGLGTCFPYVGVWDVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDJ8</accession>
    <name>E3EDJ8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutathione peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">bsaA1</name>
        <name evidence="6" type="ORF">PPSC2_06395</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glutathione peroxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369937.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19340"/>
    <dbReference type="EnsemblBacteria" id="ADO55306">
        <property type="protein sequence ID" value="ADO55306"/>
        <property type="gene ID" value="PPSC2_06395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1316"/>
    <dbReference type="eggNOG" id="COG0386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029507_2_2_9"/>
    <dbReference type="OMA" id="FPMMSKI"/>
    <dbReference type="OrthoDB" id="1635499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004602">
        <property type="term" value="F:glutathione peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00340">
        <property type="entry name" value="GSH_Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000889">
        <property type="entry name" value="Glutathione_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029759">
        <property type="entry name" value="GPX_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029760">
        <property type="entry name" value="GPX_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592">
        <property type="entry name" value="PTHR11592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00255">
        <property type="entry name" value="GSHPx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000303">
        <property type="entry name" value="Glutathion_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01011">
        <property type="entry name" value="GLUTPROXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00460">
        <property type="entry name" value="GLUTATHIONE_PEROXID_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00763">
        <property type="entry name" value="GLUTATHIONE_PEROXID_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51355">
        <property type="entry name" value="GLUTATHIONE_PEROXID_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 5 6" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="4">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000303-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="161" mass="18189" checksum="A7B0E23AB46FAEE4" modified="2011-01-11" version="1">MSVYKYDAQTLQGAQIPLSTYEGKVLLIVNTASKCGLTPQYKALQELYDQYHEQGLEILGFPSNQFAKQEPGSSEEISEFCQINYGVTFPMFAKTDVNGDQAHPLFRYLTHTAPGVLGSKAIKWNFTKFLITREGNVFKRYAPQTTPDKLIGDIEKLLRKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDW0</accession>
    <name>E3EDW0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Bifunctional protein GlmU</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="15">UDP-N-acetylglucosamine pyrophosphorylase</fullName>
                <ecNumber evidence="15">2.7.7.23</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="15">N-acetylglucosamine-1-phosphate uridyltransferase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="15">Glucosamine-1-phosphate N-acetyltransferase</fullName>
                <ecNumber evidence="15">2.3.1.157</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="15" type="primary">glmU</name>
        <name evidence="17" type="synonym">gcaD</name>
        <name evidence="17" type="ORF">PPSC2_00185</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>H(+) + N-acetyl-alpha-D-glucosamine 1-phosphate + UTP = diphosphate + UDP-N-acetyl-alpha-D-glucosamine</text>
            <dbReference type="Rhea" id="RHEA:13509"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:57776"/>
            <dbReference type="EC" id="2.7.7.23"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>acetyl-CoA + alpha-D-glucosamine 1-phosphate = CoA + H(+) + N-acetyl-alpha-D-glucosamine 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:13725"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57776"/>
            <dbReference type="ChEBI" id="CHEBI:58516"/>
            <dbReference type="EC" id="2.3.1.157"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="15">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="15">Bacterial outer membrane biogenesis; LPS lipid A biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="15">Nucleotide-sugar biosynthesis; UDP-N-acetyl-alpha-D-glucosamine biosynthesis; N-acetyl-alpha-D-glucosamine 1-phosphate from alpha-D-glucosamine 6-phosphate (route II): step 2/2.</text>
    </comment>
    <comment type="pathway">
        <text evidence="15">Nucleotide-sugar biosynthesis; UDP-N-acetyl-alpha-D-glucosamine biosynthesis; UDP-N-acetyl-alpha-D-glucosamine from N-acetyl-alpha-D-glucosamine 1-phosphate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 15">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">In the C-terminal section; belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 15">In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.23" evidence="15"/>
    <dbReference type="EC" id="2.3.1.157" evidence="15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54026.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13200"/>
    <dbReference type="EnsemblBacteria" id="ADO54026">
        <property type="protein sequence ID" value="ADO54026"/>
        <property type="gene ID" value="PPSC2_00185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.36"/>
    <dbReference type="eggNOG" id="COG1207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029499_15_2_9"/>
    <dbReference type="UniPathway" id="UPA00113">
        <property type="reaction ID" value="UER00532"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00973"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019134">
        <property type="term" value="F:glucosamine-1-phosphate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003977">
        <property type="term" value="F:UDP-N-acetylglucosamine diphosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000902">
        <property type="term" value="P:cell morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006048">
        <property type="term" value="P:UDP-N-acetylglucosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd03353">
        <property type="entry name" value="LbH_GlmU_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01631">
        <property type="entry name" value="GlmU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005882">
        <property type="entry name" value="Bifunctional_GlmU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038009">
        <property type="entry name" value="GlmU_C_LbH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025877">
        <property type="entry name" value="MobA-like_NTP_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14602">
        <property type="entry name" value="Hexapep_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12804">
        <property type="entry name" value="NTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01173">
        <property type="entry name" value="glmU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13 15 17" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10 15" id="KW-0133">Cell shape</keyword>
    <keyword evidence="14 15" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="4 15" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 15" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 15" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="6 15" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11 15" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 15 17" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transf_3" evidence="16">
        <location>
            <begin position="5"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyrophosphorylase" evidence="15">
        <location>
            <begin position="1"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-GlcNAc binding" evidence="15">
        <location>
            <begin position="8"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-GlcNAc binding" evidence="15">
        <location>
            <begin position="77"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Linker" evidence="15">
        <location>
            <begin position="230"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="region of interest" description="N-acetyltransferase" evidence="15">
        <location>
            <begin position="251"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="region of interest" description="Acetyl-CoA binding" evidence="15">
        <location>
            <begin position="385"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="362"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="22"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="139"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="227"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="332"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="350"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="365"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="376"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="404"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="422"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="439"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF12804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO54026.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="464" mass="49460" checksum="6C1B6CA11EB4D432" modified="2015-05-27" version="2">MERLAVILAAGQGKRMKSKLYKVLHPVCGKPMVGHVLDTVREIGVSRSVVVVGHGAEAVQSYLGPSAEYALQAEQLGTGHAVKQAKDLLGQEQGTTIVICGDTPLITAETLEGLVQLHESRGAAATILTAELDNPKGYGRVIRDTSGAVLKIVEQKDCSPEEDAVREINTGTYCFDNAKLFAALDKVTNTNAQQEYYLTDVIGILHGEGEQVEAYLTNDVSESIGVNDRVALSVAEGYMRERIVRKHMLNGVTVIDPSSTYIGSDVVIGSDTVLHPNTWLHGQTQIGEDCVIGPQAEIQNTVIHSGATVKHSVLNEAEVGSSTSVGPFAYLRPGAKLGEHVKIGDFVEVKNATIGDHSKVSHLSYVGDAKVGTNVNIGCGAITVNYDGYNKSITEIEDDAFVGSNVNLIAPIKIGKGAYVVAGSTVTHAVPDNDLAIARPRQENKAGYADKIRARAKAKKKRSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDZ7</accession>
    <name>E3EDZ7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">Methionine aminopeptidase</fullName>
            <shortName evidence="2">MAP</shortName>
            <shortName evidence="2">MetAP</shortName>
            <ecNumber evidence="2 3">3.4.11.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Peptidase M</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">map</name>
        <name evidence="5" type="synonym">map1</name>
        <name evidence="5" type="ORF">PPSC2_02510</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 2">Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>Release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.</text>
            <dbReference type="EC" id="3.4.11.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="2 3">Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.18" evidence="2 3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369117.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15245"/>
    <dbReference type="EnsemblBacteria" id="ADO54477">
        <property type="protein sequence ID" value="ADO54477"/>
        <property type="gene ID" value="PPSC2_02510"/>
    </dbReference>
    <dbReference type="GeneID" id="66574488"/>
    <dbReference type="KEGG" id="ppm:PPSC2_02510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.486"/>
    <dbReference type="eggNOG" id="COG0024">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015857_0_1_9"/>
    <dbReference type="OMA" id="CITWPDN"/>
    <dbReference type="OrthoDB" id="1285136at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070084">
        <property type="term" value="P:protein initiator methionine removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01086">
        <property type="entry name" value="MetAP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01974">
        <property type="entry name" value="MetAP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001714">
        <property type="entry name" value="Pept_M24_MAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002467">
        <property type="entry name" value="Pept_M24A_MAP1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00599">
        <property type="entry name" value="MAPEPTIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00500">
        <property type="entry name" value="met_pdase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00680">
        <property type="entry name" value="MAP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="4">
        <location>
            <begin position="11"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="27164" checksum="AC19E6AEB5A2F65B" modified="2011-01-11" version="1">MIIIKTKEQIENMKKAGEILAACHREIAKMIKPGITTLEIDAFAESFMKKHGATPEQKGYNGYQFATCGSPNDVICHGFPNKTPLKDGDIVTIDMVVNLNGWLADSAWSYAVGNVSEQAQKLLDVTKESLYKGIEQAVVGNRIGDISHAIQTYAEAEGFSVVREFIGHGIGEEMHEQPQVPHYGPPHRGPRLKEGMVITIEPMLNTGTYRSKIDADGWTARTLDGGLSAQYEHTLAITADGPIILTQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE05</accession>
    <name>E3EE05_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">blt1</name>
        <name evidence="10" type="ORF">PPSC2_02650</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. TCR/Tet family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369125.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0501"/>
    <dbReference type="EnsemblBacteria" id="ADO54485">
        <property type="protein sequence ID" value="ADO54485"/>
        <property type="gene ID" value="PPSC2_02650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.494"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_11_9"/>
    <dbReference type="OMA" id="VRAGSWK"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="102"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="164"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="218"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="254"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="285"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="308"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="348"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="371"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="11"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="400" mass="42978" checksum="7488D1C2667C6700" modified="2011-01-11" version="1">MSDSQQLKMGPLVILMINMFIAMLGIGLIIPILPKFMGSLGGSGETGGYLVAVFGLTQFIFSPLAGEWSDKYGRKKMIIIGLVIMTVSSVLFAIGHSLTMLYISRLLGGAGAAFMIPPMMAYIADITTVHNRGRGMGLLGAAMSLGFVIGPGVGGLLADISLRTPLYVSAAVSGLAALISLILLPETLSLEKQLKFRNVKVKRDNVIKQFALSFRKPYFMLLIMIFTLTFGLTHFETMFPFFVTGKFHYNERDIAIIITVGALVGTIIQAVVISPMLNRFGEKGVIIGSFLFSAISLVLMLLSGNFYYVLGVSLIFFTATSLLRPAINTALSKMAGDEQGVAAGMNNAYMSIGNILGPALAGTLFEVHINLPYIFGAVILMLSLGLAVKWKSRDTQSTAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE72</accession>
    <name>E3EE72_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Tellurium resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_04960</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TelA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54995.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885884.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17855"/>
    <dbReference type="EnsemblBacteria" id="ADO54995">
        <property type="protein sequence ID" value="ADO54995"/>
        <property type="gene ID" value="PPSC2_04960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.999"/>
    <dbReference type="eggNOG" id="COG3853">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064935_0_0_9"/>
    <dbReference type="OMA" id="QGYLAMD"/>
    <dbReference type="OrthoDB" id="498244at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008863">
        <property type="entry name" value="Toxic_anion-R_TelA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38432">
        <property type="entry name" value="PTHR38432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05816">
        <property type="entry name" value="TelA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="345"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="118"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54995.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="366" mass="41202" checksum="FD9001E967F8D058" modified="2015-05-27" version="2">MATPWAELRKEDEQKVTEEASQLIQKVSQSDVMSLDTLMDDIGKLGVKTQERAGQTLKMLDRPVNDLMSGDRAEVSNMILKLRDECETLQQSKDVGFFGKLLRKSPLKNYIYKYQSVKTNIEKIITALRNGKDNLEENIVSMRQLKKASIEEIYNLQTKIAFGNRLKELFEAEIAKPENENRKPHLERGLRKVVTRTQSMTEMILLYNQAIAATDIINDNNDKLIDSVNNAIDKTSNLITVSAMIAMALADQDKIISAVDATNRTIEDQFKENAKLLKTTTERTTDLLSKPSMSLEAVNQAIGDLVSALDLSEKSNRRIIESCHDYTSKMTAINTNLSQRLGIEGKEQSKPLKDNHSSEGLSSFLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE94</accession>
    <name>E3EE94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydeP5</name>
        <name evidence="2" type="ORF">PPSC2_05065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO55017.1"/>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_05065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05065"/>
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    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
    <dbReference type="Pfam" id="PF01638">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="19"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="12891" checksum="DDE26AAF455FFC01" modified="2011-01-11" version="1">MGYGLKNYGDCSEEVIKGCPVEMVLHMIGGKWKGIIIDILSEKSVRFNELKRLIPGISQRMLTLQLRELEADGIVKRIVDDTVPPKVEYSLTEQGNKLLSIIDSIRVWGKEFLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA2</accession>
    <name>E3EEA2_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
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    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1043"/>
    <dbReference type="EnsemblBacteria" id="ADO55025">
        <property type="protein sequence ID" value="ADO55025"/>
        <property type="gene ID" value="PPSC2_05100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1033"/>
    <dbReference type="eggNOG" id="COG4632">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_885196_0_0_9"/>
    <dbReference type="OMA" id="YETKIIL"/>
    <dbReference type="OrthoDB" id="813167at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168395" evidence="1">
        <location>
            <begin position="30"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="36"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="56"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="34911" checksum="A7796454ED8F8DAF" modified="2011-01-11" version="1">MSMKKWVLSLTAVALLWGGTSTIPTTEAASSTKPIEVLLNAKKIQFPDAKPFQDGNDYVMVPIRFVSEALGAKVGWEKTGGQLAVSIKNDAHAVNMTVGQNTATVDGQTKTYETKIILKQNRTFVPLRLVSEGLGQTVEWDKVSHWVWIGKKEIAALEDTGHQAVSIEPYKKAFTTKSYLLENADGEKYSKVLIFKSSDLPVRLLRDLYSIEPYTNDKGTTYMKMRVRTTSSAGGIFYITNNNEIRYRYPVLDLTSNNGDGTKTLYYPIYSSRDELFDKVKNYKSFKINDIKYIGFDGWSDKYIPLMVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEF2</accession>
    <name>E3EEF2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Iron ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">feuC</name>
        <name evidence="8" type="ORF">PPSC2_06845</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370034.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19815"/>
    <dbReference type="EnsemblBacteria" id="ADO55403">
        <property type="protein sequence ID" value="ADO55403"/>
        <property type="gene ID" value="PPSC2_06845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1410"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_2_9"/>
    <dbReference type="OMA" id="WLLPGCA"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="94"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="125"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="158"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="207"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="248"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="284"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="315"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="36352" checksum="A5B9E540AA053DC6" modified="2011-01-11" version="1">MRKISAKRLWFVLSGGAALILAASYVSLTHGEFDMTLQEVIQTLFRIHPTPQLDLVIFDFRLPRIVIAALVGLGLGIAGAAVQGVTRNGLADPGILGINAGAGAAIVIFMFFYQGQMETTGWTAALAMPFFGLIGGLMAALLIYLFAWKAGRLDPQRLLLVGIAIGSGFGSLSLYLSLKMKASDFEMATVWMSGSIWSADWKLVAAVIPWLVILIPVIWLKSYVLDLFQLHEHTAKSLGVATEKEKSILLLSSIGLVSACVSVSGGIGFVGLLSPHIARRLVGLHHRFVIPVCGMVGMVLVLLSDFIAKTVVAPAEIPVGLIIAVIGVPYFVVLLMKKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEL8</accession>
    <name>E3EEL8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YheD1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yheD1</name>
        <name evidence="1" type="ORF">PPSC2_08185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370328.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20790"/>
    <dbReference type="EnsemblBacteria" id="ADO55705">
        <property type="protein sequence ID" value="ADO55705"/>
        <property type="gene ID" value="PPSC2_08185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1721"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_0_1_9"/>
    <dbReference type="OMA" id="WMFEANS"/>
    <dbReference type="OrthoDB" id="1230237at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="456" mass="51872" checksum="B172B003C033F2CD" modified="2011-01-11" version="1">MSLTHCNVHFSQQPDKVAYISTALLKSLKLSGAKSIRLRLGKDQIPATVKPIQKAGRHLYLTSGLRNAIRVPKSGSIYLRNLDGDVQLGPLIGVLSDATSSTTRPFGSRTGFIKQLLKEGSKKSYIFAFTPRDINWQNDTINGYFLSSSGEFTRKLVPLPDVIYNRLPSRRSDFSPAINQLRERFSRKRIPFFNWSFFNKSDIYHLLENNPEVNRYVPESYMNPSSERIRGMLERHQFAYYKPSSGSLGKGIYRLSYVPKQGYYVRYRKKNSNVLLRFASFNSMLRMLHSNKGQTLKGYVIQQGIQLIEIDNCPIDFRFHMHKDGNNQWVVVGIGAKKAGRGSVTTHIKNGGSLMTPEQALGRVFGDRAGEVLQRAKNVAVTLAEAIEYHHQHLLGEIGFDLGIDQDEKVWMFEANSKPGRSIFQHPSLRAEGKASVEHILDHCLYLSKFRRKEEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP9</accession>
    <name>E3EEP9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ycf27</name>
        <name evidence="9" type="ORF">PPSC2_08330</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370356.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20935"/>
    <dbReference type="EnsemblBacteria" id="ADO55736">
        <property type="protein sequence ID" value="ADO55736"/>
        <property type="gene ID" value="PPSC2_08330"/>
    </dbReference>
    <dbReference type="GeneID" id="66578246"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1751"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_1_9"/>
    <dbReference type="OMA" id="FDYIGGQ"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="135"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="135"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="26903" checksum="0BA86DDB0F968462" modified="2011-01-11" version="1">MGQRLLVIEDEPTLARLLSYNLIQEGFEVDTEDHGSAGFERASRESYDLILLDLMLPGMNGLDILSRLRHQGLTTPIIILTAKNGEAEVVQGLKSGADDYITKPFGVSELLARVTAVLRRTSGGDEGVLSEQKDGSKIQLGELEIYPEKYEVILGGQSISLRPKEFEVLLYLSRKPGVVLTRDDLMNAVWGFDYIGGQRTVDVHVSSLRKKLELDPDSVHIDSIRGVGYKLVVNKKRSASHLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEQ4</accession>
    <name>E3EEQ4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Formamidopyrimidine-DNA glycosylase</fullName>
            <shortName evidence="15">Fapy-DNA glycosylase</shortName>
            <ecNumber evidence="15">3.2.2.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">DNA-(apurinic or apyrimidinic site) lyase MutM</fullName>
            <shortName evidence="15">AP lyase MutM</shortName>
            <ecNumber evidence="15">4.2.99.18</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">mutM</name>
        <name evidence="15" type="synonym">fpg</name>
        <name evidence="19" type="synonym">mutM1</name>
        <name evidence="19" type="ORF">PPSC2_08355</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14 15">
            <text>2'-deoxyribonucleotide-(2'-deoxyribose 5'-phosphate)-2'-deoxyribonucleotide-DNA = a 3'-end 2'-deoxyribonucleotide-(2,3-dehydro-2,3-deoxyribose 5'-phosphate)-DNA + a 5'-end 5'-monophospho-2'-deoxyribonucleoside-DNA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:66592"/>
            <dbReference type="Rhea" id="RHEA-COMP:13180"/>
            <dbReference type="Rhea" id="RHEA-COMP:16897"/>
            <dbReference type="Rhea" id="RHEA-COMP:17067"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:136412"/>
            <dbReference type="ChEBI" id="CHEBI:157695"/>
            <dbReference type="ChEBI" id="CHEBI:167181"/>
            <dbReference type="EC" id="4.2.99.18"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>Hydrolysis of DNA containing ring-opened 7-methylguanine residues, releasing 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine.</text>
            <dbReference type="EC" id="3.2.2.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="15">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 15">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">Belongs to the FPG family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.23" evidence="15"/>
    <dbReference type="EC" id="4.2.99.18" evidence="15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370361.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20960"/>
    <dbReference type="EnsemblBacteria" id="ADO55741">
        <property type="protein sequence ID" value="ADO55741"/>
        <property type="gene ID" value="PPSC2_08355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1756"/>
    <dbReference type="eggNOG" id="COG0266">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038423_1_2_9"/>
    <dbReference type="OMA" id="GVHLRMT"/>
    <dbReference type="OrthoDB" id="1162346at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140078">
        <property type="term" value="F:class I DNA-(apurinic or apyrimidinic site) endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008534">
        <property type="term" value="F:oxidized purine nucleobase lesion DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00103">
        <property type="entry name" value="Fapy_DNA_glycosyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015886">
        <property type="entry name" value="DNA_glyclase/AP_lyase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020629">
        <property type="entry name" value="Formamido-pyr_DNA_Glyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012319">
        <property type="entry name" value="FPG_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035937">
        <property type="entry name" value="MutM-like_N-ter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_S13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000214">
        <property type="entry name" value="Znf_DNA_glyclase/AP_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010663">
        <property type="entry name" value="Znf_FPG/IleRS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01149">
        <property type="entry name" value="Fapy_DNA_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06831">
        <property type="entry name" value="H2TH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06827">
        <property type="entry name" value="zf-FPG_IleRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00898">
        <property type="entry name" value="Fapy_DNA_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01232">
        <property type="entry name" value="H2TH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="SSF46946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81624">
        <property type="entry name" value="SSF81624"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00577">
        <property type="entry name" value="fpg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51068">
        <property type="entry name" value="FPG_CAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51066">
        <property type="entry name" value="ZF_FPG_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 15" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 15" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9 15" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="13 15" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="7 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 15" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 15" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 15 16" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="FPG_CAT" evidence="18">
        <location>
            <begin position="2"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="FPG-type" evidence="17">
        <location>
            <begin position="240"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with DNA" evidence="15">
        <location>
            <position position="2"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="15">
        <location>
            <position position="3"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor; for beta-elimination activity" evidence="15">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor; for delta-elimination activity" evidence="15">
        <location>
            <position position="264"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>DNA</name>
            <dbReference type="ChEBI" id="CHEBI:16991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>DNA</name>
            <dbReference type="ChEBI" id="CHEBI:16991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>DNA</name>
            <dbReference type="ChEBI" id="CHEBI:16991"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00024490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ADO55741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="30680" checksum="D13857F1C917EAA9" modified="2011-01-11" version="1">MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIDAFAMELAGHRITGVERRGKFLRILLDGLVLVSHLRMEGRYGLYSQDDPVEKHTHVIFHFKDGTELRYQDVRQFGTMHLFPAGQDLLEKPLNKLGLEPMDEAFTPEMLRAAVGTRSTSIKAALLNQSYVVGIGNIYVDESLFKAGIHPAQPAKSLTDSQFRVLHEAIVSTLGASIQVGGSSIKSFVNGQGKTGDFQHQLQIYGRNAKPCMNCGTLIEKSVVAGRGTHHCPVCQPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEZ0</accession>
    <name>E3EEZ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yfiC1</name>
        <name evidence="10" type="ORF">PPSC2_00620</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368758.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13610"/>
    <dbReference type="EnsemblBacteria" id="ADO54113">
        <property type="protein sequence ID" value="ADO54113"/>
        <property type="gene ID" value="PPSC2_00620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.122"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="LGIMLWG"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
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        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="165"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="261"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="22"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="340"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="373"/>
            <end position="380"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="579" mass="63709" checksum="7049125E05D71628" modified="2011-01-11" version="1">MSGKETWRRLLTYVGQYKTTTFWVIISAILSVLASLVGPYMIGRAIDHMVNQGAVDFRGIAQILYGLGVVYVVGSLFSWLLTYLTNRIAFQTVNDMRRELFDHFNILPLSFHDNHPQGDSISRFVNDMDAVSDGLLQGFSTLITGLITIIGSIVLMLYISPVMTLVVLVSAPITYVVARFITTKSQRMFREQAKILGSLNGYVEEMIGGQRVVTAFHYENRSLEEFSARNEQLYQAGVKSQFYGSLSNPSTRLVNNMTFSVTAMIGCISIILGGISVGGLSSFLIYTNLFAKPFNEITGVLTQFQAATASAQRIFAILDSPPEQPEKSNAVQPERSKGTILFDHVKFSYNPERTLITNFSLEVKPGTRVAIVGQTGAGKTTLVNLLMRFYDVDSGSISIDGVNINDMSRDSLRTNFGMVLQDTWLFSGTIRDNIAYGKPEATDEEVIAAATAANAHSFIKRLPHGYDTVISGSGDSLSQGQRQLLTIARVILVDPPMLILDEATSSIDTLTEARIQKAFMKMIDGRTSFVIAHRLSTIREADLILYMKNGDVVESGTHEGLLASGGHYASLYNSQFTTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEZ7</accession>
    <name>E3EEZ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">phnT</name>
        <name evidence="6" type="ORF">PPSC2_00655</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368765.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13645"/>
    <dbReference type="EnsemblBacteria" id="ADO54120">
        <property type="protein sequence ID" value="ADO54120"/>
        <property type="gene ID" value="PPSC2_00655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.129"/>
    <dbReference type="eggNOG" id="COG3842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_1_9"/>
    <dbReference type="OMA" id="HEIVCVL"/>
    <dbReference type="OrthoDB" id="1200451at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
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        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="332" mass="37834" checksum="F439F6BE7DCF43AD" modified="2011-01-11" version="1">MNQDLYIRGVSKTFSQTTALHETNLIVRQGKFTTLLGPSGCGKTTLLRLIAGLETPDIGTITMGEEILFSAKRKKDVPTHLRHFGMVFQDFALWPHMTVFENVAFGLRASKRGKRAVNAQGKELRAVVLEALDKVRLSGLEDRYPHQLSGGQQQRVAFARAVAIRPRLVLFDEPLSALDAVLREEMRIEMISLVRDLGLTALYVTHDQIEAMSMSDEVVVMKSGHILQTGTPEVIYSRPAHPEVARFIGKSNWIELERTLFRPEHVRWEQEQADQHTFTVEILHVSYVGDRYEIRLLAENGEQWTAYHSTRLPIGEQMHIWVSPQYIHQLET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF40</accession>
    <name>E3EF40_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ydiC1</name>
        <name evidence="10" type="ORF">PPSC2_02985</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. EmrB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369199.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15800"/>
    <dbReference type="EnsemblBacteria" id="ADO54560">
        <property type="protein sequence ID" value="ADO54560"/>
        <property type="gene ID" value="PPSC2_02985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.568"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_28_3_9"/>
    <dbReference type="OMA" id="LDIIWRM"/>
    <dbReference type="OrthoDB" id="1108236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004638">
        <property type="entry name" value="EmrB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00711">
        <property type="entry name" value="efflux_EmrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="25"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="93"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="118"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="151"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="181"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="213"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="244"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="282"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="311"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="345"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="368"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="413"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="459"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="27"/>
            <end position="483"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="492" mass="52951" checksum="860DAF5F0D84D1E1" modified="2011-01-11" version="1">MSSTTTTATTAATYQENIEVQKKRWMILIVLNLFTFMSTLDGSIVNIALPVLSRTLHLPVAQIEWVTTAYLMAICTAILFFGKLGDMVGKIKIFKIGTIIFILGSLLCGLSSSLSLLLISRIIQAIGASMTMANSQGIVTDIFPSTERGKALGLIGTFVSLGSIAGPSLGGIIVSSLGWQYIFWVNVPIGLIAVFLGWRLLPKDLIKVKDKIDVPGSLVFAIFILTLFVGLLLGQQVGYGDPRIIASLVVAVVAFAIFIWLELRRPQPLLQLALFKNPLFSLSILCAFLVFVANFCFNIISPFYAQNMLNLSPFYAGFLLMLFPISMVIVAPLSGALSDKIGSELLTFAGLVVMVVAQIGLAELHAGSSIPLVGLWIAMLGIGSGLFQSPNNSLIMSKVPRTQLGSAGSVNSLVRNVGMVVGITLATTILFNVMSKEAGYRVTGLVPGHPEIFLEGMHVVFMTSASICLVSALLTGWRLIGTKRARTQQEKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF70</accession>
    <name>E3EF70_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NUDIX hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-740</name>
        <name evidence="2" type="ORF">PPSC2_03115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369229.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15925"/>
    <dbReference type="EnsemblBacteria" id="ADO54590">
        <property type="protein sequence ID" value="ADO54590"/>
        <property type="gene ID" value="PPSC2_03115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.596"/>
    <dbReference type="eggNOG" id="COG1443">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060552_1_0_9"/>
    <dbReference type="OMA" id="YEFVIEQ"/>
    <dbReference type="OrthoDB" id="1345242at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="29"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="23551" checksum="1503ACF5B5BB55BC" modified="2011-01-11" version="1">MTSELLDIYDDEDNPLGTASRQEAHAKGYWHHTFHCWLARDTSTGRRLLFQQRQDTKDTFPGCYDITAAGHLTSGEDMSQAARELEEELGIYVPFTSLTPLMTVRYESKGTAQGTSFWDREVSSVFGLLSNQPLEAYCLQQEEVAGLYEADLDQALALFEGHIPFIEAQGITSGPNPEKTRRLITPDQFVPHQAGYITSVCRALMELPSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF93</accession>
    <name>E3EF93_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sphX</name>
        <name evidence="3" type="ORF">PPSC2_05250</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369689.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18165"/>
    <dbReference type="EnsemblBacteria" id="ADO55056">
        <property type="protein sequence ID" value="ADO55056"/>
        <property type="gene ID" value="PPSC2_05250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1064"/>
    <dbReference type="eggNOG" id="COG0226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026228_4_1_9"/>
    <dbReference type="OMA" id="NTTHQAY"/>
    <dbReference type="OrthoDB" id="1222928at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024370">
        <property type="entry name" value="PBP_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12849">
        <property type="entry name" value="PBP_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_domain" evidence="2">
        <location>
            <begin position="259"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="484" mass="54061" checksum="22261078198CE416" modified="2011-01-11" version="1">MSDPKGVITKPEKDESVRTAWFWPWLGGTFMFGLFSVMFNIIWSMVVAPQVQYLLRHEGVTDTTVIVILLLYAWIIGLIFAAYGALSARMSNMGKLPLMLTGLLSLLCGLWLWIVGLRGSGGQLAEVSGGAWELFSLYHAWAEPVLEVLGLYTQLSGICFLLTALLPIIGMVVGVGVDRYPAVTDQNGKVDHRWQWVVAAISAALIIVLTITLMLPQRPYIAERDFPVVDGATAAIPFAQDMLHELTGMSKVRAAHELRFNTTHQAYVNLIEKKADLILVAGPSDEELRLAKSRGIQMKLTPIGWDAFIFLVHKGNPVNGLSSEQVRSIYEGSIRNWSEVGGKNQPIVAYQREENSGSQTYMQKKVMKGHDMAEPPRELRIGIMGEMINAVADFNKDHNALGYSFYYFANVMHNRQEVKFLSIDGVEPDKEHIRSKQYPFTAQLFVVTREGEKPRASMQRLLEWLQSEVGTRAIEKGGFVPVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN8</accession>
    <name>E3EFN8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">yycG1</name>
        <name evidence="14" type="ORF">PPSC2_07425</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370156.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20400"/>
    <dbReference type="EnsemblBacteria" id="ADO55529">
        <property type="protein sequence ID" value="ADO55529"/>
        <property type="gene ID" value="PPSC2_07425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1535"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_6_9"/>
    <dbReference type="OMA" id="KQFIGNI"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 14" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="34"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="13">
        <location>
            <begin position="214"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="12">
        <location>
            <begin position="295"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="265"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO55529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="527" mass="59185" checksum="A7F7579BFF8A5A37" modified="2011-01-11" version="1">MNEHHSLHSQESLQSTDPQKRKHKRTGLSLRWKFPLVLAALLLFTVGVLSWLVLTGIRANQTDQMERGLKRQAEIVEMRVKQSYLLGAGQSPEDFMKKQAPQLAVELGVSSNMRVILYDGRGHEVGNSLPLAYRTDVGQALSYALQGKIAYITEGSSVTYLAPLQGPDGLLGVVQLHSSIEAQQQFYQDIARLFLWTGGAVLVLSFILGLGYVSRQTRDIGRLTRASEQISAGHYPEARLLRRQDELGRLDEGMLQMSHVIRASITALENEKLRLEEAVRRLRELEQQQKTFIGNISHELKTPLTSIQAYADLLDMYGDDPELVREARESIGKETKRLYELVEDSLRLSVLDKYDFELHTEEVELHLLLEDAGSRIRGKAAARGLNFSMDTIPAKVCGDPKHLMHIVLNLLDNAVKYNQDEGWITLSNRVEKDTVIVYIRNSGPWIPREKWDMIFEPFATLSRDRSRQDSGTGLGLPLARRLAERMGGELQLTASDETGLENGNGHSGASGNEFSLRLPLLVHDGFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT5</accession>
    <name>E3EFT5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55807.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599624.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21140"/>
    <dbReference type="EnsemblBacteria" id="ADO55807">
        <property type="protein sequence ID" value="ADO55807"/>
        <property type="gene ID" value="PPSC2_08665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1825"/>
    <dbReference type="eggNOG" id="COG1520">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_665381_0_0_9"/>
    <dbReference type="OrthoDB" id="539002at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011044">
        <property type="entry name" value="Quino_amine_DH_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50969">
        <property type="entry name" value="SSF50969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55807.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="437" mass="49493" checksum="9A07ED2269F420D3" modified="2015-05-27" version="2">MSWLDHEMAAQWRQEGKRYAADVNEFVRIGMESQWQQEQPEPKQDERSKLAEDIFRMIQEANQAGEIEQLRQEIPAASWPLTPAFEEALQAVRPMAFINGGNEVILHAGNPRERGQIYVAGKDGIRQIPGMHRVGCSSDGSYFALVDGQGIRIVRQPDRNLQGEETAHFQWTDIQVRLKASIPDLECLADEEHPEDILDEVIPFGDGQRLLLVCGYGVYLLASDQVELIHPTASERRELGLEDTIVDMAHGAVSKDGRWLAYGSQMSEHLLMDLTDRTVHTLEPSSSYPHYALFSKDDMDVWYNACHFYNGATIQVPIAEVEQGIAQNKEEWPIINEEMRVYAAVVLTQGSILGDAYGYLRLIDREGRELWRYFVGSTISGLAVTPDEGMLAVGTYGGMLHLIDLQSGSKDEYSIGTAPIHETERWLLWRSYEPLRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFZ6</accession>
    <name>E3EFZ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Hemolysin D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yplQ</name>
        <name evidence="7" type="ORF">PPSC2_09705</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0073 (Hly-III) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370644.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22170"/>
    <dbReference type="EnsemblBacteria" id="ADO56029">
        <property type="protein sequence ID" value="ADO56029"/>
        <property type="gene ID" value="PPSC2_09705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2045"/>
    <dbReference type="eggNOG" id="COG1272">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051078_1_0_9"/>
    <dbReference type="OMA" id="HEVFHSL"/>
    <dbReference type="OrthoDB" id="1659567at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019835">
        <property type="term" value="P:cytolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004254">
        <property type="entry name" value="AdipoR/HlyIII-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005744">
        <property type="entry name" value="Hy-lIII"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20855">
        <property type="entry name" value="PTHR20855"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03006">
        <property type="entry name" value="HlyIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01065">
        <property type="entry name" value="hlyIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="108"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="194"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24340" checksum="4C572B217658A61D" modified="2011-01-11" version="1">MANTYTYSRREEVANAITHGIGAVLSVAALVLLIVFASMKGTAWHVVSFTIYGITMLLLYTNSTLLHSLREGKLKDLFEIFDHSCIYLFIAGSYTPFMLVALRGTLGWTLFGVIWGIALFGVLFKAFFTKRFLFMSTVFYIIMGWLITIAWNPLMAIVPAGGMTLLFVGGLMYTLGTIFYVWRAFPYHHAIWHLFVLAGSILHFLAVLLYLTPVRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG15</accession>
    <name>E3EG15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ohr subfamily peroxiredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ohrA3</name>
        <name evidence="2" type="ORF">PPSC2_09795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the OsmC/Ohr family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370662.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22265"/>
    <dbReference type="EnsemblBacteria" id="ADO56048">
        <property type="protein sequence ID" value="ADO56048"/>
        <property type="gene ID" value="PPSC2_09795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2065"/>
    <dbReference type="eggNOG" id="COG1764">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106355_2_1_9"/>
    <dbReference type="OMA" id="YSACFDS"/>
    <dbReference type="OrthoDB" id="1984062at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019953">
        <property type="entry name" value="OHR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33797">
        <property type="entry name" value="PTHR33797"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03561">
        <property type="entry name" value="organ_hyd_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="15232" checksum="3FDD71FC48A1FB81" modified="2011-01-11" version="1">MMTIQQKMYETTVKAVGGRNGYIESSSPELRLDIDTPKEMGGAGGTGTNPEQLFAAGYSACFDSALNMVARMQRVKHEGTEVTATVHFGKVEDGGFGIGVNLDVLVKGVDHETAVKLVEGAHEQCPYSRATRGNIEVKLNVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG58</accession>
    <name>E3EG58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Serine protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ispA1</name>
        <name evidence="7" type="ORF">PPSC2_10705</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370857.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EG58"/>
    <dbReference type="STRING" id="1406.LK13_23100"/>
    <dbReference type="MEROPS" id="S08.030"/>
    <dbReference type="EnsemblBacteria" id="ADO56251">
        <property type="protein sequence ID" value="ADO56251"/>
        <property type="gene ID" value="PPSC2_10705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2267"/>
    <dbReference type="eggNOG" id="COG1404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011263_15_0_9"/>
    <dbReference type="OMA" id="SGQYDWI"/>
    <dbReference type="OrthoDB" id="923655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07477">
        <property type="entry name" value="Peptidases_S8_Subtilisin_subset"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023827">
        <property type="entry name" value="Peptidase_S8_Asp-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034202">
        <property type="entry name" value="Subtilisin_Carlsberg-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="SSF52743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00136">
        <property type="entry name" value="SUBTILASE_ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 7" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Peptidase_S8" evidence="6">
        <location>
            <begin position="40"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="35136" checksum="78291A5D7673D8EB" modified="2011-01-11" version="1">MERKVHIIPYQVIKQEQQVNEIPRGVELIQAPAVWNQTRGRGVKVAVLDTGCDSDHPDLKARIIGGRNFTDDDEGDPEIFKDYNGHGTHVAGTIAAAENEDGVVGVAPEADLLIIKVLNKQGSGQYDWIVQGIYYAIEQQADIISMSLGGPEDVPELHEAVKKAVASQILVICAAGNEGDGDDRTDELGYPGCYNEVISVGAINFDRHASEFSNSNNEVDLVAPGEDILSTVPGGKYATFSGTSMATPHVAGALALIKQLANASFERELTEPELYAQLIKRTIPLGNSPKLEGNGLLYLTAVEELSRIFDTQRVAGILSTESLKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG73</accession>
    <name>E3EG73_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcQ3</name>
        <name evidence="2" type="ORF">PPSC2_10780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56266.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885936.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23175"/>
    <dbReference type="EnsemblBacteria" id="ADO56266">
        <property type="protein sequence ID" value="ADO56266"/>
        <property type="gene ID" value="PPSC2_10780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2283"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036804_0_0_9"/>
    <dbReference type="OMA" id="IPIGFHE"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168929" evidence="1">
        <location>
            <begin position="28"/>
            <end position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56266.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="548" mass="62246" checksum="59C9294C999168BC" modified="2015-05-27" version="2">MNIRKWQKGLLAVVLLVGPLVGCTSGGNGTATELKDEKTKATADAPGWKADTEPITFDWYLNFSWFPNKWGTDMTSKYVTQKTGVSVNFIVPAGNENEKLNTMLASGKLPDFVTLSWGEDAIKKMIEGKMVLPLNKLAEKYDPYLIKVADPAKMSWYRQTDGNVYGYPNASSSPQDYQKYGQNFVSNQTFMVRKDMYEAIGKPDMRTPEGFLKALQKAKEKFPEVNGQPLIPIGFHEFTDNGNYSFEDYLLNFLAIPHEKGGKLYDRRSDEEYIRWLKTFRQANEQGLIAKDVFIDKRPQMEEKVAQGRYFAMLYQRSDFATQQVTLHAKDPNSVYIAVDGPSNSKLEPPTLAGPGISGWTVTLISKDVKDKERAIEFLTYLISEEGNRDLYLGEQGKLWDTVNGKPAFKPEVLELLNKDRSAFDKKYGASSTFWMLMDTNMSLQWAPPSVEPYKQPEDWTKGKTHSFSQYENIKPTGTSAEGIASGQIDKIWGKALPKLLLASSDEEFDQLFARFLEDRKKAGYDKVLAYQQKAYEENIKKMEQFTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK8</accession>
    <name>E3EGK8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-798</name>
        <name evidence="3" type="ORF">PPSC2_03365</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO54647.1"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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        <property type="protein sequence ID" value="ADO54647"/>
        <property type="gene ID" value="PPSC2_03365"/>
    </dbReference>
    <dbReference type="GeneID" id="66574301"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.657"/>
    <dbReference type="eggNOG" id="COG0607">
        <property type="taxonomic scope" value="Bacteria"/>
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        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108527_0_0_9"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ArsR-like_HTH"/>
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        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
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        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
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        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001307">
        <property type="entry name" value="Thiosulphate_STrfase_CS"/>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
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        <property type="entry name" value="WH_DNA-bd_sf"/>
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    </dbReference>
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        <property type="entry name" value="RHOD"/>
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    </dbReference>
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        <property type="entry name" value="SSF52821"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="2">
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            <begin position="6"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="130"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="25053" checksum="1D52E5FF56AF70B7" modified="2011-01-11" version="1">MNERDFKDGLFTEYARIGKCLSSPKRLEILDILIQGPKSVEVLSKMTSMSVANVSQHLQTLYQAKLVQSKKQGNFVYYELSDSSVLHFLNSLYDLSEKQLIEVQHIKEQFLGQFSDVEGVTMEELAMRMEKGEVTLLDVRPRDEYETAHIPGAVSVPIEELAEQLSLLPADSKIVAYCRGPYCLMAVRAIELLQAHGFEARHLDKSVHDWNDFILNEVTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGP1</accession>
    <name>E3EGP1_PAEPS</name>
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        <recommendedName>
            <fullName evidence="5">CDP-diacylglycerol--serine O-phosphatidyltransferase</fullName>
            <ecNumber evidence="4">2.7.8.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Phosphatidylserine synthase</fullName>
        </alternativeName>
    </protein>
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        <name evidence="9" type="primary">pssA1</name>
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    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a CDP-1,2-diacyl-sn-glycerol + L-serine = a 1,2-diacyl-sn-glycero-3-phospho-L-serine + CMP + H(+)</text>
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            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57262"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="2.7.8.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.8" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16325"/>
    <dbReference type="EnsemblBacteria" id="ADO54680">
        <property type="protein sequence ID" value="ADO54680"/>
        <property type="gene ID" value="PPSC2_03525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.690"/>
    <dbReference type="eggNOG" id="COG1183">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049944_3_2_9"/>
    <dbReference type="OMA" id="YSICGML"/>
    <dbReference type="OrthoDB" id="1232102at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003882">
        <property type="term" value="F:CDP-diacylglycerol-serine O-phosphatidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004533">
        <property type="entry name" value="CDP-diaglyc--ser_O-PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000462">
        <property type="entry name" value="CDP-OH_P_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01066">
        <property type="entry name" value="CDP-OH_P_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00473">
        <property type="entry name" value="pssA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00379">
        <property type="entry name" value="CDP_ALCOHOL_P_TRANSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
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    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
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    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="5"/>
            <end position="24"/>
        </location>
    </feature>
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        <location>
            <begin position="30"/>
            <end position="54"/>
        </location>
    </feature>
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        <location>
            <begin position="66"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="90"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="120"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="145"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="18594" checksum="96D5A637A4CA483F" modified="2011-01-11" version="1">MKWNWLPSLCTIANLGAGVLSLYFTIHEQYMTAFILVVVAALWDVLDGLLARLLHCSSDFGKQLDSLADVVSFGVAPAFLILLYKLGDTHWIGPLVAVLFVICGAVRLARFNLMAFSKGFVGMPITAAGVILSFMFLWSEHLKPGVLLALMVVLSFLMVSRIPFPSFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHA9</accession>
    <name>E3EHA9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ykvI</name>
        <name evidence="3" type="ORF">PPSC2_09100</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370517.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21570"/>
    <dbReference type="EnsemblBacteria" id="ADO55900">
        <property type="protein sequence ID" value="ADO55900"/>
        <property type="gene ID" value="PPSC2_09100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1917"/>
    <dbReference type="eggNOG" id="COG3949">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043930_0_0_9"/>
    <dbReference type="OMA" id="PMAQVVY"/>
    <dbReference type="OrthoDB" id="1725392at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038728">
        <property type="entry name" value="YkvI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37814">
        <property type="entry name" value="PTHR37814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="36"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="85"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="115"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="144"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="216"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="263"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="298"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="321"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="346"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="352"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="40884" checksum="63E6D706721C5F90" modified="2011-01-11" version="1">MKRNIHVFQIAFTYIGTIVGAGFATGQEILQFFTQYGRWATITIMLSTLVFVWLGTKMMLIAHDISARSYEDLNKHLFGANAGKWISIFTLIVLIGVNSVMLAGAGSVFVEHLHLHYQTGLLITLIGTYLLLNKGIKAILHMNTIVVPLMITISLLLVHSTLSMPNPQSFITNTTDHSALRTWISPLLYTSFNLAMAQAVLVPLGSQTFSRKTIRWGGVLGGIGVGFMLMAAHFVMSAQMPGIQQFEIPMGSIAYRLGALVEIIYILLIFMEIFSTFVADIYGVSLQIRQHVQISPKLITLFIMLTCFLISQFGFSSLLSVLYPIFGMLSLMWVSKLILAGRGRPFRSSRPRSSFRHSDSKPGDTRHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHJ5</accession>
    <name>E3EHJ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Stage V sporulation protein S</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">spoVS</name>
        <name evidence="1" type="ORF">PPSC2_10265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430104.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22735"/>
    <dbReference type="EnsemblBacteria" id="ADO56148">
        <property type="protein sequence ID" value="ADO56148"/>
        <property type="gene ID" value="PPSC2_10265"/>
    </dbReference>
    <dbReference type="GeneID" id="66665531"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2163"/>
    <dbReference type="eggNOG" id="COG2359">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_168904_1_0_9"/>
    <dbReference type="OMA" id="IGIEIAC"/>
    <dbReference type="OrthoDB" id="1985350at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036882">
        <property type="entry name" value="Alba-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007347">
        <property type="entry name" value="SpoVS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35331">
        <property type="entry name" value="PTHR35331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04232">
        <property type="entry name" value="SpoVS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="8809" checksum="CACBEDC5F1ACA315" modified="2011-01-11" version="1">MDVLKVSAKSNPNSVAGALAGVLRERGNAELQAIGAGALNQAIKAVAIARGFVAPSGVDLICIPAFTDIVIDGEDRTAIKLIVEPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHK7</accession>
    <name>E3EHK7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370767.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56160">
        <property type="protein sequence ID" value="ADO56160"/>
        <property type="gene ID" value="PPSC2_10320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2174"/>
    <dbReference type="eggNOG" id="ENOG5032SB1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_142273_1_0_9"/>
    <dbReference type="OMA" id="EHCRLCA"/>
    <dbReference type="OrthoDB" id="1635052at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd08026">
        <property type="entry name" value="DUF326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005560">
        <property type="entry name" value="DUF326"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044543">
        <property type="entry name" value="YHJQ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03860">
        <property type="entry name" value="DUF326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12176" checksum="C2BC82CE245C4FB3" modified="2011-01-11" version="1">MNHSYQKCVDACLECMNACNVCYVASLKEYDLAMLRECIRVSRECAEICGFASQMLQRGTDFAEEICELCAKACEVCAAECSKHSHNHCKHCAEACRHCVEACRQLVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHY8</accession>
    <name>E3EHY8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">ATP-dependent Clp protease proteolytic subunit</fullName>
            <ecNumber evidence="5">3.4.21.92</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Endopeptidase Clp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">clpP</name>
        <name evidence="8" type="synonym">clpP3</name>
        <name evidence="8" type="ORF">PPSC2_11785</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 7">Belongs to the peptidase S14 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.92" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371085.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24110"/>
    <dbReference type="MEROPS" id="S14.001"/>
    <dbReference type="EnsemblBacteria" id="ADO56480">
        <property type="protein sequence ID" value="ADO56480"/>
        <property type="gene ID" value="PPSC2_11785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2494"/>
    <dbReference type="eggNOG" id="COG0740">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058707_3_2_9"/>
    <dbReference type="OMA" id="TIQAENM"/>
    <dbReference type="OrthoDB" id="1728970at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07017">
        <property type="entry name" value="S14_ClpP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00444">
        <property type="entry name" value="ClpP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001907">
        <property type="entry name" value="ClpP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023562">
        <property type="entry name" value="ClpP/TepA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033135">
        <property type="entry name" value="ClpP_His_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10381">
        <property type="entry name" value="PTHR10381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00574">
        <property type="entry name" value="CLP_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00127">
        <property type="entry name" value="CLPPROTEASEP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00493">
        <property type="entry name" value="clpP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00382">
        <property type="entry name" value="CLP_PROTEASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0720">Serine protease</keyword>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <feature type="active site" evidence="5 6">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="21385" checksum="5FC76006EE8E2FCA" modified="2011-01-11" version="1">MSVYVPYVVEQTAQGERSYDIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLAAEDPEKDIYMYINSPGGSTSAGFAIYDTMQYIKPEVHTICTGFAASFGAILLLAGAKGKRSALPNSEIMIHQPHGGAQGQASDIAISAKRILWTREKATRITAERTGQSFEKVEKDMDRDFYMSAQEALEYGVIDQVITSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ4</accession>
    <name>E3EHZ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YraL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yraL</name>
        <name evidence="2" type="ORF">PPSC2_11815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371091.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24140"/>
    <dbReference type="EnsemblBacteria" id="ADO56486">
        <property type="protein sequence ID" value="ADO56486"/>
        <property type="gene ID" value="PPSC2_11815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2502"/>
    <dbReference type="eggNOG" id="COG5566">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_159841_0_0_9"/>
    <dbReference type="OMA" id="KAYCLSY"/>
    <dbReference type="OrthoDB" id="1812700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014875">
        <property type="entry name" value="Mor_transcription_activator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08765">
        <property type="entry name" value="Mor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mor" evidence="1">
        <location>
            <begin position="11"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="89" mass="10511" checksum="D383FA7C992163CB" modified="2011-01-11" version="1">MRYTNATKVLPQKLITEIQKYVQGETLYIPKPKTEYMNWGSLSGGRRLLEQRNTEIRNAFQNRSSIEQLAKEFFLSTETIKKIVYSHKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI07</accession>
    <name>E3EI07_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thioredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371200.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2627"/>
    <dbReference type="EnsemblBacteria" id="ADO56596">
        <property type="protein sequence ID" value="ADO56596"/>
        <property type="gene ID" value="PPSC2_12325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2615"/>
    <dbReference type="eggNOG" id="COG0526">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090389_16_1_9"/>
    <dbReference type="OMA" id="TVCHAVL"/>
    <dbReference type="OrthoDB" id="1630944at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="9"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="13168" checksum="D76F699FE6C2BF56" modified="2011-01-11" version="1">MNKELLSIEEIDAFIQNNRLSMLYFSQENCNVCHSVYPKLKDLLTKFPSIKLAHVDTSNVEEVVGKFLIFSVPTIIMFIDQRESFREGRFVQLGPLAARLQQLNDFWLKSNSGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI76</accession>
    <name>E3EI76_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fructosamine deglycase</fullName>
            <ecNumber evidence="1">3.5.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">frlB1</name>
        <name evidence="3" type="ORF">PPSC2_03810</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the conversion of a range of fructosamine 6-phosphates to glucose 6-phosphate and a free amino acid.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homooctamer.</text>
    </comment>
    <dbReference type="EC" id="3.5.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369380.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16625"/>
    <dbReference type="EnsemblBacteria" id="ADO54744">
        <property type="protein sequence ID" value="ADO54744"/>
        <property type="gene ID" value="PPSC2_03810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.754"/>
    <dbReference type="eggNOG" id="COG2222">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012520_3_0_9"/>
    <dbReference type="OMA" id="PLCEHSD"/>
    <dbReference type="OrthoDB" id="1046291at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05710">
        <property type="entry name" value="SIS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05009">
        <property type="entry name" value="SIS_GlmS_GlmD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035488">
        <property type="entry name" value="FrlB_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024713">
        <property type="entry name" value="Fructosamine_deglycase_FrlB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035490">
        <property type="entry name" value="GlmS/FrlB_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009290">
        <property type="entry name" value="FrlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="9"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR009290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="35914" checksum="EEF0314F88FECDDE" modified="2011-01-11" version="1">MNVQQTIQTINEQANGKISEVYLVACGGSLVDMYPSKYFLDSEAKKLVAGMYTANEFVHALPKRLGAHSVVIVCSHGGNTPESVAAAKSAKEKGAYTIGLTHNSEASLLNYSDYSFLYEWGDESDVKNNPMAIILELTVELLQITEGYAHYPAFQNGLGAINGIINRAKVQVEPRAQVFADRYRNEELFYILTSGASYGHAYGFAICSLMEMQWLHAASIHSGEFFHGPFEVTDKETPFILMINEGRTRALDERAQTFLNQYAEKVEVIDAKELGIGTIADEVVEFFNPVLFYSIVCVYREALANVRNHPLETRRYMGKVAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIA0</accession>
    <name>E3EIA0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bacitracin ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bcrA3</name>
        <name evidence="5" type="ORF">PPSC2_05955</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369845.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EIA0"/>
    <dbReference type="STRING" id="1406.LK13_18920"/>
    <dbReference type="EnsemblBacteria" id="ADO55213">
        <property type="protein sequence ID" value="ADO55213"/>
        <property type="gene ID" value="PPSC2_05955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1219"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="RWFGNVV"/>
    <dbReference type="OrthoDB" id="1833499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="11"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="306" mass="33420" checksum="3C73BDB958E65A99" modified="2011-01-11" version="1">MQQATGQVPVIRMEGVSKIISSKAIVDNLTLEVPAGQVFGFLGPNGAGKTTTIRMMVGLISISKGDIHICGDSINTDFEKAVSHVGAIVENPEMYKFLTGYQNLQHFARMSPGVTQERIDEAIRLVGLGNRIHDKVKTYSLGMRQRLGVAQAILHRPKLLVLDEPTNGLDPQGIRELRDYLRQLTRTEGITVFVSSHLLSEMELMCDRVAIIQSGRLVDIKQLKNTEGEVQTAEIAFEVNDAEQAYTLAGAGRVEGNQLLLHLEREQIAEMNSLLAANGVKVYAISPVARTLEDQFLEVTGGGSIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIC0</accession>
    <name>E3EIC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetate CoA-transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">atoA</name>
        <name evidence="3" type="ORF">PPSC2_06045</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit B family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369865.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19010"/>
    <dbReference type="EnsemblBacteria" id="ADO55233">
        <property type="protein sequence ID" value="ADO55233"/>
        <property type="gene ID" value="PPSC2_06045"/>
    </dbReference>
    <dbReference type="GeneID" id="66573731"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1239"/>
    <dbReference type="eggNOG" id="COG2057">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019942_4_1_9"/>
    <dbReference type="OMA" id="VAMMHTN"/>
    <dbReference type="OrthoDB" id="1380130at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012791">
        <property type="entry name" value="3-oxoacid_CoA-transf_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02428">
        <property type="entry name" value="pcaJ_scoB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="23073" checksum="DFC3EFF57A628C88" modified="2011-01-11" version="1">MNNRELIIRRIAQEFKDGEVVNLGIGLPTMAVDYIPENVNIMLQAENGIVGVGPKAAPGKERLDCIDSGGNYVTTVKGACFIDSALSFSIIRGGHVDVTVLGALEVDEKGNLANWMIPGKKVPGMGGAMDLVVGAKRVIVAMEHVNKNGAPKILKQCKLPLTAVNVVKTIVTEKGVIDVIPGKGLMLKEIAPGLSVEDVQMATEAELMVSPHLKTIAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIN4</accession>
    <name>E3EIN4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA gyrase inhibitor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yosT1</name>
        <name evidence="2" type="ORF">PPSC2_08015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370295.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1697"/>
    <dbReference type="EnsemblBacteria" id="ADO55672">
        <property type="protein sequence ID" value="ADO55672"/>
        <property type="gene ID" value="PPSC2_08015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1685"/>
    <dbReference type="eggNOG" id="COG3449">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113664_1_0_9"/>
    <dbReference type="OMA" id="PKEECRY"/>
    <dbReference type="OrthoDB" id="1748122at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010499">
        <property type="entry name" value="AraC_E-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029442">
        <property type="entry name" value="GyrI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06445">
        <property type="entry name" value="GyrI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00871">
        <property type="entry name" value="AraC_E_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AraC_E_bind" evidence="1">
        <location>
            <begin position="1"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="17470" checksum="17BA332257246E3B" modified="2011-01-11" version="1">MKAKIEKIPSCRIAYMRQIGPYGIANSQLMEKFKCWVKSNNLFNKTSIILGIAQDNPAFVKPENCRYDACLVLPDDYCVNTDEVNLSNISEGRYAVFKINHTAEAVQKAWTEIFLELEIKRFSLDETRPILERYTVELINNHYCEICVPIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIQ7</accession>
    <name>E3EIQ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">frlD3</name>
        <name evidence="2" type="ORF">PPSC2_08135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370318.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1721"/>
    <dbReference type="EnsemblBacteria" id="ADO55695">
        <property type="protein sequence ID" value="ADO55695"/>
        <property type="gene ID" value="PPSC2_08135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1711"/>
    <dbReference type="eggNOG" id="COG0524">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027634_13_0_9"/>
    <dbReference type="OMA" id="DYGFVSC"/>
    <dbReference type="OrthoDB" id="1604782at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="1">
        <location>
            <begin position="13"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="33131" checksum="90F301CB5BB6A158" modified="2011-01-11" version="1">MEQYKVIGIGDNVVDKYVHQGMMYPGGNALNFCAYARMCGMEASYLGKFGNDHIAQYIQKVIDDLGIERNHCRIFEGENGYARVTLEDGDRVFLGSNKGGIAKEKAWDFTENDLNYIKNFSVIHTSLNSYIEQNLATLKKTNVPISYDFSVRWNDEYLKQICRYADISFLSCSHLTESERKREMLKAQKFGSKIVIGTVGENGSVALYKDQWMHQPAVLTDTVDTMGAGDSYITAFIVEMIRSSNAGKIFYGEDEDMLRSIKASMEKGAVFAAKICQINGAFGYGTPIRCLDSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIR3</accession>
    <name>E3EIR3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugpE3</name>
        <name evidence="7" type="ORF">PPSC2_09255</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370549.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21725"/>
    <dbReference type="EnsemblBacteria" id="ADO55932">
        <property type="protein sequence ID" value="ADO55932"/>
        <property type="gene ID" value="PPSC2_09255"/>
    </dbReference>
    <dbReference type="GeneID" id="66578087"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1950"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_1_9"/>
    <dbReference type="OMA" id="IATPMAY"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="244"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="73"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="31068" checksum="C4F2E1C6558CF386" modified="2011-01-11" version="1">MSHSQKTKVTNIIIFIVLAIGAIAMIAPLLWMLSTSVKEKQDVFALPPVWIPEVFQFGKYKEIWEAGPLLSGIKNSVIVAVSVTVVGTFTSSVAAFAFAKLRFPHKNKLFLALIASMMIPYPTVMIPQFMMFSKLGWIDTLLPLIVPGLFGNVVMIFFLRQYLLSVPDAIIEAAKIDGSSYFRLYSSITFPLIKPAVAAQLILWFMGIWNDYLAPIIYLNSPETQTLQLVIANFNATYAIQTDYPLIMAASIIALLPVLIIFLIFQKQIIESVAISGVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIT5</accession>
    <name>E3EIT5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yjdF1</name>
        <name evidence="2" type="ORF">PPSC2_09355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1982"/>
    <dbReference type="EnsemblBacteria" id="ADO55954">
        <property type="protein sequence ID" value="ADO55954"/>
        <property type="gene ID" value="PPSC2_09355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1971"/>
    <dbReference type="eggNOG" id="COG3647">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087528_0_0_9"/>
    <dbReference type="OMA" id="WDTQWDM"/>
    <dbReference type="OrthoDB" id="1341485at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014509">
        <property type="entry name" value="UCP020606"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09997">
        <property type="entry name" value="DUF2238"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF020606">
        <property type="entry name" value="UCP020606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="23619" checksum="B7D39B05181F0EE9" modified="2011-01-11" version="1">MNQATAWSKNDRYPLILLVLLVLALIWSLVRPADYFTWVLEVLPAVLGAILLAALYRRFRFTNLVYTLIWLHALILIVGGHYTYAEMPLFNWIRDTFGLERNYYDRLGHFAQGFVPALIVREVLLRKTALGSGSWLTFLTVSVCLAISAVYELIEFAVAKATGTAAEAFLGTQGDVWDTQWDMLLAFIGALTAVILLSGVHNKLLKQLKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIU4</accession>
    <name>E3EIU4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">msmE5</name>
        <name evidence="2" type="ORF">PPSC2_09395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370580.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21865"/>
    <dbReference type="EnsemblBacteria" id="ADO55963">
        <property type="protein sequence ID" value="ADO55963"/>
        <property type="gene ID" value="PPSC2_09395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1980"/>
    <dbReference type="eggNOG" id="COG1653">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_12_3_9"/>
    <dbReference type="OMA" id="ANEEYGF"/>
    <dbReference type="OrthoDB" id="480174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168987" evidence="1">
        <location>
            <begin position="29"/>
            <end position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="425" mass="46536" checksum="385712D36537DD8B" modified="2011-01-11" version="1">MRKQLKVAISLACLMMFIGCSASPVSQQTTKITFLNSKSEIKTQLEEVAKQYNQEHPEVSLEIITAPEGTSAYQKLMSMYGSGSPATMSMLDPGDTQTFLDKAVDLSKEKWVADTIENGLDAVKKNDAVLGFPFAVEGYGLIYNKKVLDKATGGPFDPSSVNSRSSLNSLMAKIQKSGVAPVMLSPMDWSLGSHLLALAYSVQPGGFPEFVKGMQNNSIDMSQNNVMSGWVQTLDLLKDNNINKHAPLDSTYEDGSKALGEGKVGLWFMGNWAWNGIKSNDTANEEYGFLPLPLNDNTDDPNNSKITVGVTKYVFIDSTATTPQQQEEAKKFLNWLVYEKSGQELLVNKANVIPAFKNIDLVPSDPLSKSIKSYMSNGKTLPFMATLPPDHGAITGASIQSYISGKIDKAELLRQIRIYWKAQQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ00</accession>
    <name>E3EJ00_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_10415</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370787.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22880"/>
    <dbReference type="EnsemblBacteria" id="ADO56181">
        <property type="protein sequence ID" value="ADO56181"/>
        <property type="gene ID" value="PPSC2_10415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2195"/>
    <dbReference type="eggNOG" id="COG0515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_407600_0_0_9"/>
    <dbReference type="OMA" id="RIPAMVY"/>
    <dbReference type="OrthoDB" id="592183at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="442"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="494"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="570"/>
            <end position="607"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="494"/>
            <end position="511"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="680" mass="75301" checksum="D5CA5042B1D0E569" modified="2011-01-11" version="1">MSFQPNPGDELIINGTAYVVGRHPAAPGLAYAQAGRQGIVYQLIAKNGAPHEAKALKVFFPKFRIPAMVYQSEHMETYGDIPGLQVCKRDVLTPERNGSLIAEQPDLLYAVLMPWVHGMTWFDCLTDQRQLEASDSLALARALAGIGSAMEQKGLAHCDLSAPNVMLPFFSEVELPEGTSAVELVDVEQMYSTKMDRPDALLAGSPGYAAHRTVHSGLWSAYADRFAGAIIIGEMLGWSDRVVVDKAWGESYFDQHEMQTPCERYFILRKSLESRWGSKVVELFSRAWDSQDLSSCPTFGEWLVVLNAVTEQEIPVETIETEPAVTETIESAAAGSSSETVSSLATPAPLKAEQAALLNQDVLEQGERGVTDKLFRQARELEQQNKPAAALEVYRSLYHFVEDGSPLHVEVSAAITGLEEQLNPKMPEQPEKSKAWYRSKMFIVTASAAVVLLAAGIPTVSILADQSNQRQIEATKQEEALKAAKAAEEKLAAEQEAAQKSLTEKQRQEAEQQAKQQALAAQKQQEEQKKQQALIAQQVKYEAYLAQKEQNKQAAAKLAKQKAYDQQAKYEKYLALKKEQEARAAKEEAARKAAAEAEQKRKDAIQSRNKENVLQLISLYNKAYASQEGGSTTKAKSFAKRFRALYDSNPSYYRSVGEVGYRASSIYNFLGDTNFRLPKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJA4</accession>
    <name>E3EJA4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fructose-1,6-bisphosphatase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fbp</name>
        <name evidence="5" type="ORF">PPSC2_11380</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>beta-D-fructose 1,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="3.1.3.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the FBPase class 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56391.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599716.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23740"/>
    <dbReference type="EnsemblBacteria" id="ADO56391">
        <property type="protein sequence ID" value="ADO56391"/>
        <property type="gene ID" value="PPSC2_11380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2407"/>
    <dbReference type="eggNOG" id="COG1494">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054938_0_0_9"/>
    <dbReference type="OrthoDB" id="879338at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042132">
        <property type="term" value="F:fructose 1,6-bisphosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01516">
        <property type="entry name" value="FBPase_glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004464">
        <property type="entry name" value="FBPase_class-2/SBPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30447">
        <property type="entry name" value="PTHR30447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03320">
        <property type="entry name" value="FBPase_glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004532">
        <property type="entry name" value="GlpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00330">
        <property type="entry name" value="glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0464">Manganese</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="4">
        <location>
            <position position="33"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR004532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR004532-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56391.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="34015" checksum="A031E06BC5B0E8DA" modified="2015-05-27" version="2">MESQMALEFVRVTEAAALQSAQWTGRGDKNSADEAATVAIRTHFNAVSMDGTVVIGEGEMDEAPMLYIGERVGNRRGPAMDIAVDPLEGTETVANGLNNALSVIAAAPRGSLLHAPDMYMQKLAVGPALAGKLSLEDTIPTTLSKAARILGKSLSDLTVSILDRSRHAGIIQLLRESGVRIKLLGHGDVMGAIETCLDSGVDLHIGSGGAPEGVLAAAALKCMGGEIQGRLLPHGEEEIARCKRMGITDPGALLSMEDMVGRQGVMFVATGVTPGEWLQGVRSLPGHRAETHSVVMHSDTKTIRFVRSIHHTADSSGTLAAAASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC5</accession>
    <name>E3EJC5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spr3</name>
        <name evidence="4" type="ORF">PPSC2_11475</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371017.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2440"/>
    <dbReference type="EnsemblBacteria" id="ADO56412">
        <property type="protein sequence ID" value="ADO56412"/>
        <property type="gene ID" value="PPSC2_11475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2426"/>
    <dbReference type="eggNOG" id="COG0791">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016043_8_1_9"/>
    <dbReference type="OMA" id="LTLYSFK"/>
    <dbReference type="OrthoDB" id="682655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000064">
        <property type="entry name" value="NLP_P60_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00877">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51935">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168244" evidence="2">
        <location>
            <begin position="35"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="NlpC/P60" evidence="3">
        <location>
            <begin position="37"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="17226" checksum="E880731E76D058D0" modified="2011-01-11" version="1">MKRTSKKLWMGICFTMTLALSAGSFVVGSDTTHAASTSKADRIISKGSQYMGVRYEYGAPAGSTSSFDCSSFTQYVFAQNGIKLPRSSKQQSTVGTYVPRSQLKKGDLVFFYAPIHHVAIYMGDGKILHTYGKGGVTVTKLNSGWWNSHYTTARRVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJJ0</accession>
    <name>E3EJJ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ywoD</name>
        <name evidence="9" type="ORF">PPSC2_12085</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371144.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24415"/>
    <dbReference type="EnsemblBacteria" id="ADO56540">
        <property type="protein sequence ID" value="ADO56540"/>
        <property type="gene ID" value="PPSC2_12085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2556"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_28_3_9"/>
    <dbReference type="OMA" id="PMWFFLN"/>
    <dbReference type="OrthoDB" id="1108236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="44"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="97"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="132"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="199"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="236"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="266"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="306"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="338"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="362"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="430"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="8"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="461" mass="50016" checksum="408B1F8ABD43D312" modified="2011-01-11" version="1">MSVRSWWLMISVGLGILLNPLNSSMVSVAIPSLQNVFQLDFTGVSWIIFSFYIASSIAQPIMGKASDLFGRRKMFLIGLVVAFIASLLAPLSPTFGWLIVFRIVQSIGTSMMVGVGMAIVRIHITEKQATALSVLSIFLSGAAAIGPFIGGVLVHWWNWPAIFFINIPFVVASFLLAWRTIPKDESPTSVARNMSFRKWFDLIDARGILLFTLGLVALLVGLLSAKSSGHISLENVIVGLIGLVALGAFVRYELKATSPFIPLRTFAKYPALTWVNVEFMFVNVLYYSLFFGLPSYLQVVRHVSEFQTGILMLSLGLCSLAASPIAGRWIDKSGPRPALLVSAILMTLGSVWLVTLNPTSPVISVCLALAAFGISNGLNNVGMQAALFQSSPKEIIGVASGLFNTSRYLGTIFSSLLIGIVMGGKFSFEGFQVLGIVLTVIALTLVFMSRRRLDSGQLRES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJP2</accession>
    <name>E3EJP2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386054.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0248"/>
    <dbReference type="EnsemblBacteria" id="ADO59640">
        <property type="protein sequence ID" value="ADO59640"/>
        <property type="gene ID" value="PPSC2_26935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5695"/>
    <dbReference type="HOGENOM" id="CLU_2383435_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="10854" checksum="F8424A0F341C0CA8" modified="2011-01-11" version="1">MLTLVNDKIAEHIKNLPSKKIPELQMTGKMLEQIDLIVKVKVNIHEVGFLNRDICRVLAHLDNGNLYIKRLEDGHKGIVSKVQVSFPKWENYSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJQ3</accession>
    <name>E3EJQ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386065.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0259"/>
    <dbReference type="EnsemblBacteria" id="ADO59651">
        <property type="protein sequence ID" value="ADO59651"/>
        <property type="gene ID" value="PPSC2_26890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5684"/>
    <dbReference type="eggNOG" id="COG4748">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_599705_0_0_9"/>
    <dbReference type="OrthoDB" id="849234at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="456" mass="53144" checksum="B9135DAA5E1793DA" modified="2011-01-11" version="1">MKELFSFLDEASKVRLHTLLSQYISRHLKKQFPVPTVEMFNEVNRTEFAKEILRKNGQSTTFLIHKYKYKTTRTYTESEFFEDIVQYIDLKIPLYYYRQTMLHPKDDWIRFKKSYKGIRMFPGLKFKYHQNIEREKHWIQHTLLCRDAKDHTNSQSRHDPLIQLELKPIVEPGSKANQKQIRVIQNLCRKMGIAITNLHVLKKNTASALMGNLSRGIIYAPLFQEKNLDLAFANLQKVADTGDSRRRGDFEANLLFLEQRKHAYTNLNKANTKSVLVRPLLRMLGYDTENPTEVYEEFPCGNQLIDFSIMKDGKPFILIVVSSEKRGFEDRYQTVLNKAPSAAYIIRTNGSEYLIYGIKEGKEIYYLDSATLSVNNHNVPLLQSFAKESIFKEDEPRLLVHLKEEANRILQIGQVKSMIKSPPKELLDVFTKQGISKGSVMSVFHKAINEFSQECK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJY8</accession>
    <name>E3EJY8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386421.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO60007">
        <property type="protein sequence ID" value="ADO60007"/>
        <property type="gene ID" value="PPSC2_28150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5968"/>
    <dbReference type="HOGENOM" id="CLU_2634784_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8888" checksum="48BB9C3E39F68695" modified="2011-01-11" version="1">MKDVNIKLSEEQYKNIMLLLHSWIEMVPYMKQKVADNSDLNNIFANLESSLVEIQTTLSKMDEEVSPSTCTTKRGKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJZ2</accession>
    <name>E3EJZ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386425.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO60011">
        <property type="protein sequence ID" value="ADO60011"/>
        <property type="gene ID" value="PPSC2_28135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5964"/>
    <dbReference type="HOGENOM" id="CLU_2790079_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="7700" checksum="6E545C43CC602F42" modified="2011-01-11" version="1">MELKVVLKANINGIEVEAEKPYTVKEDMFLTSELMRFAIENKAYSLKAFNQEGELICVFDGGPSWDTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKB6</accession>
    <name>E3EKB6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385857.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0049"/>
    <dbReference type="EnsemblBacteria" id="ADO59443">
        <property type="protein sequence ID" value="ADO59443"/>
        <property type="gene ID" value="PPSC2_27845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5901"/>
    <dbReference type="eggNOG" id="COG1418">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_608232_0_0_9"/>
    <dbReference type="OMA" id="ENIDQHE"/>
    <dbReference type="OrthoDB" id="1749498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="506" mass="60177" checksum="3DB50F55962A7BE6" modified="2011-01-11" version="1">MKNLIKSLREPFTKQQMIPLLNMSNDVRQRLDNQISHFPTEEDIQEISNTYSINPAHLYVIDKTVPCYCYYDFPVYINIDVLSKEYFEMFDIRKKIDLIREESARAWKDKNYSCIFVFTNEQAKILLFNEMYWKVQNEDKFDLFQDVYTSLDYGHALVDSKIVRDVWQHQPEKYKKELRDHLDEQCSEDRMTIYRGESGGSTPYSESMSWTTSLNVACFFATRIRSDLKAKVYQAEVLKSDVLAYFSHRNEDEVVVFPEKLMALKEVPMALLSDEWEALQAEGYMDEYFLYKNTFINPEHYQNPEGIHGIPHVKRVLFHAITISRALGLSSRDRAILANASIYHDIGRMHDDHCTMHGEWSWQQYAREIAYEYPMLEINSVDKRKRGEASGYDIHKLSSQEVGIVRLLIEYHCRPDEECREALMRMYHFEYHCKSDEECSEALIRMHHLKQERERAWLLYRIFKDCDGLDRVRLPRNELDVKYFRTDEAVRRLVFAYQVHNNSSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKS3</accession>
    <name>E3EKS3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATP-dependent RecD-like DNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">recD2</name>
        <name evidence="3" type="ORF">PPSC2_27475</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RecD family. RecD-like subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="1"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385938.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0130"/>
    <dbReference type="EnsemblBacteria" id="ADO59524">
        <property type="protein sequence ID" value="ADO59524"/>
        <property type="gene ID" value="PPSC2_27475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5815"/>
    <dbReference type="eggNOG" id="COG0507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007524_0_3_9"/>
    <dbReference type="OMA" id="SHPQYGR"/>
    <dbReference type="OrthoDB" id="961809at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043139">
        <property type="term" value="F:5'-3' DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01488">
        <property type="entry name" value="RecD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006345">
        <property type="entry name" value="DNA_helicase_RecD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029493">
        <property type="entry name" value="RecD-like_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041451">
        <property type="entry name" value="RecD-like_SH13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027785">
        <property type="entry name" value="UvrD-like_helicase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14490">
        <property type="entry name" value="HHH_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18335">
        <property type="entry name" value="SH3_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13538">
        <property type="entry name" value="UvrD_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01448">
        <property type="entry name" value="recD_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="359"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="370"/>
            <end position="374"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="749" mass="85506" checksum="68340934C55989FB" modified="2011-01-11" version="1">MVEGKETIHAKFEIKKIRKHYEDTGYTIAEAKFTAYPASNAPTSELIIVGNFVSIFEGDEFEAEGRWVNHNVFGYQFKVELPKRIVPQTQKGIEMFIRKYVKGIGKKTAQKIVDYFGEEALKRIEEDHRSLLQVGGISEVRAKAIQDKLFKHKRFEDVGTFVLSNGGNHKVALRIYEEFGEASIMKIQENPYILCAIEKVGFIIADKFSRNLSGSYRNQERIKESIIYFLNWCSKSRGDLYVSGEEIRTRLSDFLLKVGAYEGEKYRLVESDIEPALHELKSQDRIVIETNEKGVQCVYLNNNHFVENKIVSLLKNLVEKPKPPLCTALDIDRFIEQYETTYDFKFAKKQKSAIHMALLHGISILTGGPGTGKTQTINSIIQCLKQVKPGAVIHLFAPTGKASKRMSELTGMEAMTIHRGIGLGHDEDSDREIIVEGDLLVIDEISMMDAYVCYRLLSSVHENTRVLFVGDYEQLPSVGPGLILRDLINSKKIPTTRLTEIFRQAQNSQIVMNSHRIINGDIESLTFDERKGDFFFIERSNRIQAQQTIIECVKRFVTNHHYKLDDIQILTPMRKGDLGVWSLNRLMQKTFNPPSHDKAEIKLDELNVLREGDRVIHTVNNKDLEVFNGEVGRIIKIWEDADDGLQVEIEYDEKSVVYDKLCIEEVELAYVTTIHKSQGSEYPVVIMPIHSSQENMLTKNLIYTGWTRAKQKVVNIGMKSSLKVAALNEDNVRNSQIEEKVRKEINVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKU1</accession>
    <name>E3EKU1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385956.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0149"/>
    <dbReference type="EnsemblBacteria" id="ADO59542">
        <property type="protein sequence ID" value="ADO59542"/>
        <property type="gene ID" value="PPSC2_27380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5795"/>
    <dbReference type="HOGENOM" id="CLU_200422_0_0_9"/>
    <dbReference type="OrthoDB" id="2218598at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="6772" checksum="C6B717B30A024CED" modified="2011-01-11" version="1">MNEWVSRAKFAMTGEDGASNVEIIVWISVVLVIATALWLFRDAIVNFISKAKNAVDAFRVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC11</accession>
    <name>A0A0D5ZC11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Synthetase 2 Gramicidin S synthetase II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pmxA</name>
        <name evidence="8" type="ORF">PPSC2_22080</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324741.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4714"/>
    <dbReference type="EnsemblBacteria" id="AKA44315">
        <property type="protein sequence ID" value="AKA44315"/>
        <property type="gene ID" value="PPSC2_22080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4699"/>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_223200_0_0_9"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010071">
        <property type="entry name" value="AA_adenyl_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010060">
        <property type="entry name" value="NRPS_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01720">
        <property type="entry name" value="NRPS-para261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0045">Antibiotic biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="784"/>
            <end position="858"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="2309"/>
            <end position="2384"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="3392"/>
            <end position="3468"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="4476"/>
            <end position="4552"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="819"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="2344"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="3428"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="4512"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AKA44315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="5010" mass="564178" checksum="EE2E263395F2C7D3" modified="2015-05-27" version="1">[encoded data, 5010 characters]</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC32</accession>
    <name>A0A0D5ZC32_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44198">
        <property type="protein sequence ID" value="AKA44198"/>
        <property type="gene ID" value="PPSC2_06430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1324"/>
    <dbReference type="HOGENOM" id="CLU_2181297_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12722" checksum="E0B5B52577E02D53" modified="2015-05-27" version="1">MYRFTLEGSRKYTKETIDLMLEKYPHLQREGELFHLHVGEKIQRYDAYLDNLVNSGISECGSIRQLGSILFVMGTGIMMKKRYSNGYFASWNTSFFTGYIQTVYQPVIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCG4</accession>
    <name>A0A0D5ZCG4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025677576.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44261">
        <property type="protein sequence ID" value="AKA44261"/>
        <property type="gene ID" value="PPSC2_13815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2945"/>
    <dbReference type="HOGENOM" id="CLU_1968392_0_0_9"/>
    <dbReference type="OrthoDB" id="2005512at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5002300222" evidence="1">
        <location>
            <begin position="25"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="14990" checksum="9DA7E9EC0B6CCF0C" modified="2015-05-27" version="1">MKKRIFLFLILSLSIATTIGAASASPSKTSGNNIISQRSGGSATVKEAFSVPKGWGHVKLCMKNHSDHPVRVSLTHSGSNKLYIEALVIAPHDTVTWKSTDQGFSDGLRSGDYILQWRGSDYKVDGETWGVADSQPGNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCM0</accession>
    <name>A0A0D5ZCM0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Xanthine phosphoribosyltransferase</fullName>
            <shortName evidence="1">XPRTase</shortName>
            <ecNumber evidence="1">2.4.2.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">xpt3</name>
        <name evidence="1" type="synonym">xpt</name>
        <name evidence="3" type="ORF">PPSC2_24725</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>diphosphate + XMP = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine</text>
            <dbReference type="Rhea" id="RHEA:10800"/>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; XMP biosynthesis via salvage pathway; XMP from xanthine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the purine/pyrimidine phosphoribosyltransferase family. Xpt subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.22" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675736.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12220"/>
    <dbReference type="EnsemblBacteria" id="AKA44326">
        <property type="protein sequence ID" value="AKA44326"/>
        <property type="gene ID" value="PPSC2_24725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5240"/>
    <dbReference type="eggNOG" id="COG0503">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_099015_0_0_9"/>
    <dbReference type="OrthoDB" id="1532478at2"/>
    <dbReference type="UniPathway" id="UPA00602">
        <property type="reaction ID" value="UER00658"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000310">
        <property type="term" value="F:xanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046110">
        <property type="term" value="P:xanthine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032265">
        <property type="term" value="P:XMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01184">
        <property type="entry name" value="XPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010079">
        <property type="entry name" value="Xanthine_PRibTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01744">
        <property type="entry name" value="XPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="2">
        <location>
            <begin position="49"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phospho-alpha-D-ribose 1-diphosphate binding" evidence="1">
        <location>
            <begin position="128"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>xanthine</name>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>xanthine</name>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>xanthine</name>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="205" mass="22207" checksum="C65D750A63A1DE5B" modified="2015-05-27" version="1">MKALEERIRQEGQILSDTVLKVDSFLNHQVDTALALEIGKEFARLFGNAPITKVLTIEASGIQFAMATAIALGVPFIYAKKKKAITLNEQVYFAEVHSFTRQETYQVSISQKYLDASDHVLIVDDFLATGAALVGLTDIVKEAGAELAGVGCVIEKSFQEGRGLLEQRGIAVRSLARIASMAPGEVHFIEEAGMVIPPVKENVGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E481</accession>
    <name>E3E481_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">pksM1</name>
        <name evidence="12" type="ORF">PPSC2_12455</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371225.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2652"/>
    <dbReference type="EnsemblBacteria" id="ADO56621">
        <property type="protein sequence ID" value="ADO56621"/>
        <property type="gene ID" value="PPSC2_12455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2641"/>
    <dbReference type="eggNOG" id="COG0001">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3321">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_21_1_9"/>
    <dbReference type="OMA" id="ETDVHHA"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="ketoacyl-synt"/>
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        <property type="entry name" value="SSF53901"/>
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        <property type="entry name" value="NRPS-para261"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="2"/>
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        <property type="match status" value="4"/>
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        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
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    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 9" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
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        <location>
            <begin position="580"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="11">
        <location>
            <begin position="1299"/>
            <end position="1377"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="11">
        <location>
            <begin position="2620"/>
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        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="11">
        <location>
            <begin position="3656"/>
            <end position="3730"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1269"/>
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        </location>
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    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1974"/>
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        </location>
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        <location>
            <position position="615"/>
        </location>
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    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="9">
        <location>
            <position position="1336"/>
        </location>
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    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="9">
        <location>
            <position position="2655"/>
        </location>
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    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="9">
        <location>
            <position position="3691"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001957"/>
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    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
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    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023194"/>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="4215" mass="469635" checksum="095EB7C562A1400E" modified="2011-01-11" version="1">[encoded data, 4215 characters]</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4H1</accession>
    <name>E3E4H1_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">ATPase and permease components</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_13625</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56870.1"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="17059" checksum="8F6F05F6B956E36E" modified="2011-01-11" version="1">MNNASTALKVAAGIFLTIALITIVVILFISAQEATKTAQNNFADIQTELSQASFTVYDGTTISGSQVTNALRKFQGKDQFGIQIKTGKNTVGQWYGNALNISPDSEQYGAVNGGSDKTGKIANTLNEKENEYVNPSGKFKAEIVKDKSNVVRGLLFTQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4L8</accession>
    <name>E3E4L8_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_13840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56917.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56917">
        <property type="protein sequence ID" value="ADO56917"/>
        <property type="gene ID" value="PPSC2_13840"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.2951"/>
    <dbReference type="HOGENOM" id="CLU_106688_0_0_9"/>
    <dbReference type="OMA" id="WGTTGQY"/>
    <dbReference type="OrthoDB" id="2203646at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168819" evidence="1">
        <location>
            <begin position="24"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="15896" checksum="6A6D492E64F01363" modified="2011-01-11" version="1">MKFKNTAIILTGLLALTAVATLAASATPFMGVELPKGHGGIVIQSTGQEVHEVLGGTSPTMEFTVKKGYGHVKIKVKNTGSNTISWSLQGNGREYLNKTVGKGDALTWTSLNSYPNGMPSGEYVIQFRAGGNKVEGEAWGTTGQYPSYIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4T6</accession>
    <name>E3E4T6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphatidylethanolamine N-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371661.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3104"/>
    <dbReference type="EnsemblBacteria" id="ADO57064">
        <property type="protein sequence ID" value="ADO57064"/>
        <property type="gene ID" value="PPSC2_14535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3102"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037990_7_0_9"/>
    <dbReference type="OMA" id="GRYPWVK"/>
    <dbReference type="OrthoDB" id="1865374at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="48"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="23587" checksum="EC047366401355E9" modified="2011-01-11" version="1">MNNKWNKAVYKIWSPIYDKFFNSGSFLNSRKIIFQEKSFNSEQKILFVGVGTGADLELINHYGLDITAIDYSPEMLNKAKEKFINTSIKFLEMDAQQMNFMDEQFDIVVGSLILSVVPNANKCFDEMVRILKKDGEIIIFDKFSPKGKKPSLFKKTIRPVIKVLGTDIGLNFEELFETQKTKLRIKEDAPIMFNGMYRKIVITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E548</accession>
    <name>E3E548_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 8">Methionyl-tRNA formyltransferase</fullName>
            <ecNumber evidence="4 8">2.1.2.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">fmt</name>
        <name evidence="12" type="ORF">PPSC2_15435</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 8">Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>(6S)-10-formyltetrahydrofolate + L-methionyl-tRNA(fMet) = (6S)-5,6,7,8-tetrahydrofolate + H(+) + N-formyl-L-methionyl-tRNA(fMet)</text>
            <dbReference type="Rhea" id="RHEA:24380"/>
            <dbReference type="Rhea" id="RHEA-COMP:9952"/>
            <dbReference type="Rhea" id="RHEA-COMP:9953"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:78530"/>
            <dbReference type="ChEBI" id="CHEBI:78844"/>
            <dbReference type="EC" id="2.1.2.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the Fmt family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.9" evidence="4 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371846.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03085"/>
    <dbReference type="EnsemblBacteria" id="ADO57256">
        <property type="protein sequence ID" value="ADO57256"/>
        <property type="gene ID" value="PPSC2_15435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3298"/>
    <dbReference type="eggNOG" id="COG0223">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033347_1_1_9"/>
    <dbReference type="OMA" id="CCPVVAY"/>
    <dbReference type="OrthoDB" id="2009156at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004479">
        <property type="term" value="F:methionyl-tRNA formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd08646">
        <property type="entry name" value="FMT_core_Met-tRNA-FMT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08704">
        <property type="entry name" value="Met_tRNA_FMT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00182">
        <property type="entry name" value="Formyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005794">
        <property type="entry name" value="Fmt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005793">
        <property type="entry name" value="Formyl_trans_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011034">
        <property type="entry name" value="Formyl_transferase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001555">
        <property type="entry name" value="GART_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044135">
        <property type="entry name" value="Met-tRNA-FMT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041711">
        <property type="entry name" value="Met-tRNA-FMT_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02911">
        <property type="entry name" value="Formyl_trans_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50486">
        <property type="entry name" value="SSF50486"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00460">
        <property type="entry name" value="fmt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00373">
        <property type="entry name" value="GART"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Formyl_trans_N" evidence="10">
        <location>
            <begin position="6"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Formyl_trans_C" evidence="11">
        <location>
            <begin position="208"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="region of interest" description="Tetrahydrofolate (THF) binding" evidence="8">
        <location>
            <begin position="113"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="34639" checksum="41FCA4366613C418" modified="2011-01-11" version="1">MSQDIRIIFMGTPEFAVPSLNMLLDNGYNVVGVITQPDKPQGRKKILTPTPVKEAAEKRGLPVLQPTRLRQPEAVAQVAELRPDLIVTAAYGQILPKSVLDLPRFGCLNVHGSLLPRYRGGAPIQRAIINGETVTGVTLMYMAEGLDTGDMISRVEVAIEPEDTSGTIFEKLSVVGARLLQDELPKLLAGQSDRTPQNEDEATYAPNLNRDDERITWSDNAQQIYNRIRGLVPFSGAFTLWENNVFKIWAAEQPSINNEASGSNAPAPGTVLQLTARGIEVQTGKGTLWLTQVQPAGKKVMEAGTFARGGQMKPGTVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5A8</accession>
    <name>E3E5A8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xre</name>
        <name evidence="2" type="ORF">PPSC2_16435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372054.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3512"/>
    <dbReference type="EnsemblBacteria" id="ADO57468">
        <property type="protein sequence ID" value="ADO57468"/>
        <property type="gene ID" value="PPSC2_16435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3509"/>
    <dbReference type="eggNOG" id="COG1396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_4_2_9"/>
    <dbReference type="OMA" id="SEGHAYM"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12844" checksum="E27686F33D97E532" modified="2011-01-11" version="1">MLSLDRLKKERILKKLTHEDMATKLGITRQAYGNYESGKRDVDSQTLSKLADILEVSGDYLLGRSISKGPSEGHAYMNGGKDWTEEEKEVADAAIQAWREMKRKQREKEQKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5L0</accession>
    <name>E3E5L0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ferric iron reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_17645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372310.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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        <property type="gene ID" value="PPSC2_17645"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="1266811at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="FhuF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022770">
        <property type="entry name" value="FhuF_domain"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FhuF" evidence="1">
        <location>
            <begin position="68"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="FhuF_C" evidence="2">
        <location>
            <begin position="230"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="29712" checksum="8F4F2EA8B34CF483" modified="2011-01-11" version="1">MDHYLSTDLWRQTVEEHSIRLGEPSEDNVRIIALSQLHEEAACREYLSWLQEYIGAPDMRVAASMLAKRIGYLWIAPLLTAMTVHHQHVSFRLDNSFLYHPTLTANEGGTHFPFLAMNGLRAEALTGDREVWREKVVKEMFALHLAPLLKTLAAIAPLSMSILWENIMIRIVPLYTPEVDNAEQESQHIIQADFSYLTQGAPGHLFGVKRNPFTRFTKNKDSIPAVKSKRTTCCFYYQMSGEYCRKCPKIDNENKSQLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E8</accession>
    <name>E3E6E8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fucose 4-O-acetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykrP</name>
        <name evidence="2" type="ORF">PPSC2_18945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06155"/>
    <dbReference type="EnsemblBacteria" id="ADO58017">
        <property type="protein sequence ID" value="ADO58017"/>
        <property type="gene ID" value="PPSC2_18945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4060"/>
    <dbReference type="eggNOG" id="COG3594">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047004_1_0_9"/>
    <dbReference type="OMA" id="ACFFAWV"/>
    <dbReference type="OrthoDB" id="1221455at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
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    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="192"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="238"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="270"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="298"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="344" mass="39160" checksum="C087D882E5203436" modified="2011-01-11" version="1">MTTSHDVQGESFFLNLRFLLIICVFAGNALEPLVGSLHLAQQWFIWIFMFHMPLFVLVTGYFAKTTLTGLAGQKVLLQIGMQYLIFQSLYSILDVVIFHVPHIHHSFFAPYLLLWFLASHICWRLLMLSFQKIPPVFQLGISVLLGILVGYLPVDGIWLSVCRTFVYLPYFVAGYHLNYADVRRFFTTPVRIIAGIVSLLLMVLAGTSYFGIPAGWLYGNMTYGELGHTEWYAGIYRIGIYGVQWIASMAFLSFVPAVTGRITEMGRRTLYVFLLHGLIVRSVVAKGVYEYIDTPVEVMLILVCATGLCCLLTMPWIRTATRPLIEPQVEWMLKPAPYLFRRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6F9</accession>
    <name>E3E6F9_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_18995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0473 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06205"/>
    <dbReference type="EnsemblBacteria" id="ADO58028">
        <property type="protein sequence ID" value="ADO58028"/>
        <property type="gene ID" value="PPSC2_18995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4071"/>
    <dbReference type="eggNOG" id="ENOG5033P2Z">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_146610_7_0_9"/>
    <dbReference type="OMA" id="YDECTLP"/>
    <dbReference type="OrthoDB" id="2057244at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009711">
        <property type="entry name" value="UPF0473"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06949">
        <property type="entry name" value="DUF1292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11531" checksum="95EF1EE4D91DFD89" modified="2011-01-11" version="1">MTSYSREDLSWTSDLKEAFDGDVELQDEQGHAIRMELEAEFKVGEQRYAVLRRPGAAAGEHELYHVSSSTDGEISITTIEDDDEWEDISELYDECTLPEEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W6</accession>
    <name>E3E6W6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_21425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4569"/>
    <dbReference type="EnsemblBacteria" id="ADO58518">
        <property type="protein sequence ID" value="ADO58518"/>
        <property type="gene ID" value="PPSC2_21425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4555"/>
    <dbReference type="HOGENOM" id="CLU_170119_0_0_9"/>
    <dbReference type="OMA" id="CFPGHAG"/>
    <dbReference type="OrthoDB" id="2103343at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050830">
        <property type="term" value="P:defense response to Gram-positive bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027632">
        <property type="entry name" value="Lant_SP_1948"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027635">
        <property type="entry name" value="Lantibiotic2_lead_pep_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16934">
        <property type="entry name" value="Mersacidin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03898">
        <property type="entry name" value="lanti_MRSA_kill"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="73" mass="7633" checksum="5F55CB5B5553F921" modified="2011-01-11" version="1">MTKEEMIQAWKNPKLRVAGEGIEHPAGDALVELSADELSRVHGGLGVQPDSTPTITVTVIGVTVLVCFPGHAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E755</accession>
    <name>E3E755_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0340 protein PPSC2_23320</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywlG</name>
        <name evidence="2" type="ORF">PPSC2_23320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0340 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10810"/>
    <dbReference type="EnsemblBacteria" id="ADO58910">
        <property type="protein sequence ID" value="ADO58910"/>
        <property type="gene ID" value="PPSC2_23320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4937"/>
    <dbReference type="eggNOG" id="COG4475">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106658_0_0_9"/>
    <dbReference type="OMA" id="FIGMHLR"/>
    <dbReference type="OrthoDB" id="1634553at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00800">
        <property type="entry name" value="UPF0340"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028345">
        <property type="entry name" value="Antibiotic_NAT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006340">
        <property type="entry name" value="DUF436"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04260">
        <property type="entry name" value="DUF436"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007510">
        <property type="entry name" value="UCP007510"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110710">
        <property type="entry name" value="SSF110710"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01440">
        <property type="entry name" value="TIGR01440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="20672" checksum="560168B49D7349F1" modified="2011-01-11" version="1">MVEQLDHEISLEAQTASVVREIAEAASLKAGRLLVIGASTSEVAGSRIGTAGALDVAQQVLSGVESVRREYGFDVAFQCCEHLNRALVVERSLLERLGLMEVAAVPVRTAGGSMATVAYRSMDDACLAANVQAHAGIDIGETLIGMHLRPIAVPFRPSLRWIGEARVTATFTRPPLIGGQRAVYSLEQEAGGNCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7F0</accession>
    <name>E3E7F0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antibiotic transport system permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373694.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5224"/>
    <dbReference type="EnsemblBacteria" id="ADO59161">
        <property type="protein sequence ID" value="ADO59161"/>
        <property type="gene ID" value="PPSC2_24480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5186"/>
    <dbReference type="HOGENOM" id="CLU_1132746_0_0_9"/>
    <dbReference type="OMA" id="HIFAREY"/>
    <dbReference type="OrthoDB" id="1569084at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="212"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="236" mass="27491" checksum="849FC4F6049A1765" modified="2011-01-11" version="1">MIRAELIKLKGSKAFLLSYIILLAVVLLMFGLSAIFYRYSIDNLGWDYYFTNIVSLVNIAAGFISYYILTGHIFAREYQENTHLFMFTTPVTRVKFYFSKLILIYGFIMVSLFFVLFLSALLGMLITDRPLTMAIWVYQIHVFARMCVMHAMLIPIASFFAIRWKSIMVVVLVVCTAIFLNFIYKSEWYPWIVPVLLSPNEGSAVRHVNIPIAWFSLFVIFLLGLFLSVWTYQRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7G3</accession>
    <name>E3E7G3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">oatA</name>
        <name evidence="5" type="ORF">PPSC2_24545</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the acyltransferase 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59174.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12025"/>
    <dbReference type="EnsemblBacteria" id="ADO59174">
        <property type="protein sequence ID" value="ADO59174"/>
        <property type="gene ID" value="PPSC2_24545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5199"/>
    <dbReference type="eggNOG" id="COG1835">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005679_11_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="36"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="144"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="172"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="208"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="238"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="268"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="308"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="331"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="379"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="4">
        <location>
            <begin position="14"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="440"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="448"/>
            <end position="495"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59174.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="648" mass="70983" checksum="A3691AF8E3B59066" modified="2015-05-27" version="2">MKSNRLSSQRRYMPGLDGLRALAVIAVIVYHLNPDWLPGGLLGVGVFFTLSGYLITDILVSQWDTYHSFKMKDFWVRRARRLLPAMLTVVAVIVLCSLLFDPSRLTALRGDVPAALVYMSNWWFIFHQVSYFESFGPPSPLGHLWSLAVEEQFYILWPLLLALGLKYMPKRIVLAGWVICLALISALLMAVIYVPGSDPSRVYYGTDTRGFALLIGAALALVWPSGKLKEHASAKARLLLDGIGAISLLLLCHWAWASNEYDPSLYRGGLLGIAVVTAIVVAALAHPVSHLGRLLGRKPLRWIGARSYGLYLWHFPVITLTTPQVDTDGVHVMRIVIQLLATILLASLSFKYVEEPIRHDGFRHWIAGIRSAVRRQVRWRWISTTATAMFCIGIGVGTVHLYVVSPDATLQAASSDEQPIAKAKAMPPLHGTVSVASKEPTAIKPQGVQDSKAPSQAQTPKNTTVKAGTADGVTTKTEPSTTSKQAKSMTGDGSSVTAIGDSVMLDVQSYIEEYFPGAVVDGRIGRQMTEAPAVLEQLRQNGQLGKTVIIELGTNGAFTKDQLSDLLASLKDTKRIILVNTRVPRPWESIVNKHLAEAASQDPRITMIDWYAASSGKNSYFEHDGVHLKPKGAKAYASLLAEALTKQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7M1</accession>
    <name>E3E7M1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cell surface protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yjfL</name>
        <name evidence="8" type="ORF">PPSC2_13415</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0719 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371429.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01100"/>
    <dbReference type="EnsemblBacteria" id="ADO56826">
        <property type="protein sequence ID" value="ADO56826"/>
        <property type="gene ID" value="PPSC2_13415"/>
    </dbReference>
    <dbReference type="GeneID" id="66577297"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2857"/>
    <dbReference type="eggNOG" id="COG3766">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1891992_0_0_9"/>
    <dbReference type="OMA" id="LLRYWAQ"/>
    <dbReference type="OrthoDB" id="1807657at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007140">
        <property type="entry name" value="DUF350"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03994">
        <property type="entry name" value="DUF350"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="75"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="14899" checksum="B7793D237B438FE9" modified="2011-01-11" version="1">MHFLETMKAMLVWTGAGAILLFVLMYVDSLFTKYKDFAEVKAGNMAVTVRMIMKLIAQGYILSGSIATANNLLEALVYSVIAFIILLVLEVIVRLLLRYWAQFDLDKGTQEGKIGFGLFSGALHLVGALIITACF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7N3</accession>
    <name>E3E7N3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glucose-1-phosphate adenylyltransferase</fullName>
            <ecNumber evidence="2">2.7.7.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">ADP-glucose pyrophosphorylase</fullName>
            <shortName evidence="2">ADPGlc PPase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">ADP-glucose synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glgC</name>
        <name evidence="4" type="synonym">glgC3</name>
        <name evidence="4" type="ORF">PPSC2_13470</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>alpha-D-glucose 1-phosphate + ATP + H(+) = ADP-alpha-D-glucose + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:12120"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57498"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="EC" id="2.7.7.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Glycan biosynthesis; glycogen biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.27" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371441.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01155"/>
    <dbReference type="EnsemblBacteria" id="ADO56838">
        <property type="protein sequence ID" value="ADO56838"/>
        <property type="gene ID" value="PPSC2_13470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2868"/>
    <dbReference type="eggNOG" id="COG0448">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029499_14_0_9"/>
    <dbReference type="OMA" id="YRMDFSQ"/>
    <dbReference type="OrthoDB" id="1557977at2"/>
    <dbReference type="UniPathway" id="UPA00164"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008878">
        <property type="term" value="F:glucose-1-phosphate adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005978">
        <property type="term" value="P:glycogen biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00624">
        <property type="entry name" value="GlgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011831">
        <property type="entry name" value="ADP-Glc_PPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023049">
        <property type="entry name" value="GlgC_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43523">
        <property type="entry name" value="PTHR43523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02091">
        <property type="entry name" value="glgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2" id="KW-0320">Glycogen biosynthesis</keyword>
    <keyword evidence="2" id="KW-0321">Glycogen metabolism</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="3">
        <location>
            <begin position="8"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="region of interest" description="Alpha-D-glucose 1-phosphate binding" evidence="2">
        <location>
            <begin position="179"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="site" description="Could play a key role in the communication between the regulatory and the substrate sites" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="408" mass="45838" checksum="5683930C1FA8E27F" modified="2011-01-11" version="1">MFNKECIAMLLAGGEGRRLAPLTSTIAKPAVPFGGHYRIIDFPLSNCVNSNIDTVGVLTQYEAESLHEHIGDGTPWGLTKTDDKGITLLPSYNTGNAEYLGTADAIHKNIEYIDSQNPEHVLILSGDHIYYMNYGEMLNYHKEKGAAATISVMEVPWDEAHRFGVMSADEDLRVTEFAEKPEKPESNLASMGIYLFKWDYLRNYLLEDAQDPQSSHDFGKDIIPKMLADQESLYVYEFQGYWKDVGTVKSLWDSHMDLLQENCAIDLQRQDWPMYTRERRTRLSAQKVSGRKMHSLDSLLHDSCQVEGQIERSVVFSGVEVGKGSSIKESIVMPDTRIGRNVHIEHAIIGEGAVIRDGAVIKGNPSEIVVIGPNETVFGKMAVRPQTTRMLKEAYERNTRLRAEGFTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E805</accession>
    <name>E3E805_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rluB</name>
        <name evidence="5" type="ORF">PPSC2_14785</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RsuA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371714.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02420"/>
    <dbReference type="EnsemblBacteria" id="ADO57118">
        <property type="protein sequence ID" value="ADO57118"/>
        <property type="gene ID" value="PPSC2_14785"/>
    </dbReference>
    <dbReference type="GeneID" id="66577026"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3155"/>
    <dbReference type="eggNOG" id="COG1187">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024979_1_2_9"/>
    <dbReference type="OMA" id="SMEFAPF"/>
    <dbReference type="OrthoDB" id="1037615at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120159">
        <property type="term" value="F:rRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042092">
        <property type="entry name" value="PsdUridine_s_RsuA/RluB/E/F_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000748">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB/E/F"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018496">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020094">
        <property type="entry name" value="TruA/RsuA/RluB/E/F_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00093">
        <property type="entry name" value="TIGR00093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01149">
        <property type="entry name" value="PSI_RSU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="4">
        <location>
            <begin position="2"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="28148" checksum="0AEE62E7757A834F" modified="2011-01-11" version="1">MERLQKILAQAGVASRRKCEELIQAGSVEVNGVTVTELGTKADPDQDMITVKGRPIKTEKKIYLMMNKPKGVITSASDPEGRKIVSDYLKGVKERVYPVGRLDYDTEGLLLLTNDGEFANLLTHPKHHVPKTYVATVKGVPHGTELDKLKKGIVLEDGITAPAEVEYKDVDPDGKESVIQITIYEGRNRQVRRMFEAISHPVIRLKRIAFGDLLLQNLKRGLTRPLTKDEINRLIQLAKSDNTKKKRTGRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E826</accession>
    <name>E3E826_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RNA polymerase sigma factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">sigF</name>
        <name evidence="8" type="ORF">PPSC2_14885</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the sigma-70 factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371734.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02520"/>
    <dbReference type="EnsemblBacteria" id="ADO57139">
        <property type="protein sequence ID" value="ADO57139"/>
        <property type="gene ID" value="PPSC2_14885"/>
    </dbReference>
    <dbReference type="GeneID" id="66577006"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3176"/>
    <dbReference type="eggNOG" id="COG1191">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014793_8_5_9"/>
    <dbReference type="OMA" id="RDDGMIK"/>
    <dbReference type="OrthoDB" id="1857862at2"/>
    <dbReference type="Proteomes" id="UP000006868">
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        <property type="entry name" value="sigma70-ECF"/>
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        <property type="entry name" value="spore_sigF"/>
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        <property type="entry name" value="SIGMA70_2"/>
        <property type="match status" value="1"/>
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    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
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    <feature type="domain" description="RNA_pol_sigma70" evidence="6">
        <location>
            <begin position="60"/>
            <end position="73"/>
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        <location>
            <begin position="219"/>
            <end position="245"/>
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            <dbReference type="ARBA" id="ARBA00023015"/>
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        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
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        <source>
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    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS00715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS00716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="28745" checksum="7534BA21C7709146" modified="2011-01-11" version="1">MEAGGKKTSHSYLEDTEVKRLIALSQSGDNDARETLVNSNIRLVWSVVQRFMNRGYEPDDLFQIGCIGLLKSVDKFDLSYEVKFSTYAVPMIIGEIQRFLRDDGTLKVSRSLKETANKVRKMKDELSKRLNRLPTVKEVADELGVTPEDVVFAQEANKPPTSIHETVFENDGDPITLMDQIADESQERWFDKLALNEAIDGLSERERLIVYLRYYRDQTQSEVASRLGISQVQVSRLEKKILQLIRDQIAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E844</accession>
    <name>E3E844_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-oxoisovalerate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dxpS</name>
        <name evidence="2" type="ORF">PPSC2_14965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02600"/>
    <dbReference type="EnsemblBacteria" id="ADO57157">
        <property type="protein sequence ID" value="ADO57157"/>
        <property type="gene ID" value="PPSC2_14965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3194"/>
    <dbReference type="eggNOG" id="COG0022">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012907_1_0_9"/>
    <dbReference type="OMA" id="SEAYYMA"/>
    <dbReference type="OrthoDB" id="900125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="THDP-binding"/>
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        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
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        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
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        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Transket_pyr"/>
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        <property type="entry name" value="SSF52518"/>
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        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transket_pyr" evidence="1">
        <location>
            <begin position="4"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="36248" checksum="8ADE6542E5F5912B" modified="2011-01-11" version="1">MAIMEYIDAIRLAMREEMEQDETVFVLGEDVGVKGGVFTTTKGLMDQFGEQRVMDTPLAESAIAGVAIGAAMYGMKPIAEMQYSDFMLPATNQIISEAAKIRYRSNNDWNCPVVIRAPIGGGIFGGLYHSQCPESIFFGTPGLKIVAPFTPYDAKGLLKAAIRDPDPVLFFENKKSYKLIKGEVPEDDYIVPIGKANLLREGDDITVIGYSQPLHFVMQAAEELEKEEGITAHVVDLRTLQPLDREAIIEAARHTGKVLIVHEDNKTGGIGAEVSAIINEECLFELDAPIERLCAPDVPAMPISPPMEKFYMLNKDKVKEAMRRLAMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E883</accession>
    <name>E3E883_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">xpB</name>
        <name evidence="8" type="ORF">PPSC2_15530</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the helicase family. RAD25/XPB subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371864.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03180"/>
    <dbReference type="EnsemblBacteria" id="ADO57275">
        <property type="protein sequence ID" value="ADO57275"/>
        <property type="gene ID" value="PPSC2_15530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3317"/>
    <dbReference type="eggNOG" id="COG1061">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008213_4_0_9"/>
    <dbReference type="OMA" id="PTHIHEY"/>
    <dbReference type="OrthoDB" id="377818at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032438">
        <property type="entry name" value="ERCC3_RAD25_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032830">
        <property type="entry name" value="XPB/Ssl2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16203">
        <property type="entry name" value="ERCC3_RAD25_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13625">
        <property type="entry name" value="Helicase_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="232"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="7">
        <location>
            <begin position="440"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="108"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="111"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="607" mass="68460" checksum="BA740EB6ECC900A8" modified="2011-01-11" version="1">MNPDHPCIVQRDFTVLLEMGLPDSEWARSQLQIYAELVKSPSAFHTYHITPLSLWNAAALGWSAEDIQNSLHSMSRWDIPRDLLKDIEQLVSRYGTLTLSRASAKEEQTYGTDTIDAHRDEQESDRDTKARKANTYTIGDHLILAVETPTLLDELLNKKELKQLGLLRTNETSASVPPENRGLLKQELTRLGYPVVDTAGYLEGNLLRFTLGKGQTELQLRDYQVKAADAFEGTDGLGGSGVLVLPCGAGKTVIGMAVMNRLQCEVLILTSNTISVRQWIEELKQKTNIPVDSIGEYSGQKKEVRPITVATYQILTHRRNKDGEFEHMKLLSERKWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGCERDVFSLIGPKRYDMPWKELERQGWIAQVDCVELRLPMTADLLEQSMRAEGRQQYRIAAENPAKLEAVRSLVEKHKGIPTLIIGQYLDQLRKLAQELDVPLITGSMTQSERVRWFDAFRKGNIQTLLVSKVANFAVDLPDAAVAIEVSGSFGSRQEEAQRLGRILRPKPGDNKAYFYALVTENSKEMDFAARRQLFLIEQGYEYAIRRFDGTMAGRSQEDEIEDGGKKKEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8C4</accession>
    <name>E3E8C4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Nitrite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">nasD1</name>
        <name evidence="14" type="ORF">PPSC2_15730</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nitrogen metabolism; nitrate reduction (assimilation).</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371902.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03425"/>
    <dbReference type="EnsemblBacteria" id="ADO57316">
        <property type="protein sequence ID" value="ADO57316"/>
        <property type="gene ID" value="PPSC2_15730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3357"/>
    <dbReference type="eggNOG" id="COG1251">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003291_0_0_9"/>
    <dbReference type="OMA" id="IVIGHGM"/>
    <dbReference type="OrthoDB" id="1128731at2"/>
    <dbReference type="UniPathway" id="UPA00653"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007419">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005117">
        <property type="entry name" value="NiRdtase/SiRdtase_haem-b_fer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036136">
        <property type="entry name" value="Nit/Sulf_reduc_fer-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012744">
        <property type="entry name" value="Nitri_red_NirB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017121">
        <property type="entry name" value="Nitrite_Rdtase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006066">
        <property type="entry name" value="NO2/SO3_Rdtase_FeS/sirohaem_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041575">
        <property type="entry name" value="Rubredoxin_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04324">
        <property type="entry name" value="Fer2_BFD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03460">
        <property type="entry name" value="NIR_SIR_ferr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18267">
        <property type="entry name" value="Rubredoxin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037149">
        <property type="entry name" value="NirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00397">
        <property type="entry name" value="SIROHAEM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55124">
        <property type="entry name" value="SSF55124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02374">
        <property type="entry name" value="nitri_red_nirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00365">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8" id="KW-0274">FAD</keyword>
    <keyword evidence="4 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0349">Heme</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="12">
        <location>
            <begin position="6"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="Rubredoxin_C" evidence="13">
        <location>
            <begin position="318"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="11">
        <location>
            <begin position="420"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="11">
        <location>
            <begin position="483"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR_ferr" evidence="10">
        <location>
            <begin position="558"/>
            <end position="620"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="9">
        <location>
            <begin position="628"/>
            <end position="767"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR037149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF18267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO57316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="810" mass="88274" checksum="D76689F91167B17D" modified="2011-01-11" version="1">MNYIQKLVLVGNGMAGIRTLEHLLKIAPGAYEITVFGAEPHPNYNRIMLSSVLAGGAGLQDIIINDWSWYEENNIRLYTDDPVTAIDTENRQVTSRSGVCVSYDLLLLATGSKAFILPLPGADKDGVIGFRDIRDCETMIETAKTHKKAAVIGGGLLGLEAARGLLNLGMDVTVIHLNGYIMDRQLDEAASLMLRRELEEQGMTFLVNKRTAAITGRRRVEGLKFADGSELEADLIVMAVGIKPDIELAVSAGIPVNRGIIVNDNMETNIPGIYAVGECAEHRGITYGLVAPLYEQGGVLAQRLAGMETPGYSGSVTSTRLKVSGVDVFSAGNYKDEPETRSLRYQDDIGGVYKKIVIKEEKLTGAVLFGDTSDGAMLFSLIKSGDSVVGREKELLLGFNPGQPEGSGTMMLEQMPEDEIVCGCNGVSKGDIGEAVAAGCRSLGEIKACTKASASCGGCKPIVEGLLQLYAGAETGEPIKEGICRCTTLDREAIIDGIREMGLKSVKEVMNVLGWNEPEGCTKCRPALNYYLGLLWPLDYEDEKESRFTNERYHANIQKDGTYSVVPRIYGGVTSPADLKKIAAVAEKYNVPLVKFTGGQRLDLLGVKKEDLPGIWSELDMPSGYAYGKTLRTVKTCVGNTFCRFGTQDAMGMGIRLEKAFERLNAPSKVKLAVSGCPRNCAEATIKDLGVVAIDGGWGIYIGGNGGIKVRAAELLCTVKTEDEVMEWTGAYLQYYREQANWNERTAHWVERVGVDSIKQVLANAEMRQQLVSRIEETLSTTTDPWHEIIHNEELRKNFVQLPELKAVME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E915</accession>
    <name>E3E915_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Rhamnulose-1-phosphate aldolase</fullName>
            <ecNumber evidence="3">4.1.2.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">rhaD</name>
        <name evidence="5" type="ORF">PPSC2_24740</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>L-rhamnulose 1-phosphate = (S)-lactaldehyde + dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:19689"/>
            <dbReference type="ChEBI" id="CHEBI:18041"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:58313"/>
            <dbReference type="EC" id="4.1.2.19"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Carbohydrate degradation; L-rhamnose degradation; glycerone phosphate from L-rhamnose: step 3/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the aldolase class II family. RhaD subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.19" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373755.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12235"/>
    <dbReference type="EnsemblBacteria" id="ADO59222">
        <property type="protein sequence ID" value="ADO59222"/>
        <property type="gene ID" value="PPSC2_24740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5244"/>
    <dbReference type="eggNOG" id="COG0235">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076831_0_0_9"/>
    <dbReference type="OMA" id="SHFMSHI"/>
    <dbReference type="OrthoDB" id="599627at2"/>
    <dbReference type="UniPathway" id="UPA00541">
        <property type="reaction ID" value="UER00603"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008994">
        <property type="term" value="F:rhamnulose-1-phosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019301">
        <property type="term" value="P:rhamnose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00770">
        <property type="entry name" value="RhaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001303">
        <property type="entry name" value="Aldolase_II/adducin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013447">
        <property type="entry name" value="Rhamnulose-1-P_Aldolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00596">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01007">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02624">
        <property type="entry name" value="rhamnu_1P_ald"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0684">Rhamnose metabolism</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Aldolase_II" evidence="4">
        <location>
            <begin position="21"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="220"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="31772" checksum="CB95E04BA3F57341" modified="2011-01-11" version="1">MTTVLENQKERKSGLDIPFVREMAEITQNMWKFGWDERNGGNVSYILDEAEVAKYIDIQKVIRTIKPAFPVNELAGKYFIVTGSGKYFKNVIADPEANLGVLRVSQDGEQLEILWGLKHDAVPTSEFPSHFMSHIERLKVDPNHRVVIHNHATHVIAMTFIHSLDENKFTKTLWEMCTECIVVFPDGIGVIPWMVPGSSEIGRETAKKMKDHHAVLWPHHGIFGTGSSIDEAFGLIETIEKAAQIYMLIAQHEIKQRITDQELADLAKAFNVTPKEGILNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E937</accession>
    <name>E3E937_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Crp/Fnr family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fnr7</name>
        <name evidence="5" type="ORF">PPSC2_24840</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373777.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12330"/>
    <dbReference type="EnsemblBacteria" id="ADO59244">
        <property type="protein sequence ID" value="ADO59244"/>
        <property type="gene ID" value="PPSC2_24840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5265"/>
    <dbReference type="eggNOG" id="COG0664">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075053_3_4_9"/>
    <dbReference type="OMA" id="IIPHHSL"/>
    <dbReference type="OrthoDB" id="1596937at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00325">
        <property type="entry name" value="Crp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0010">Activator</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="3">
        <location>
            <begin position="3"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="4">
        <location>
            <begin position="140"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="20251" checksum="0FA4ABC9D7212528" modified="2011-01-11" version="1">MILHKGETLFRQGETGPLYHLKSGLLKIIRVHEDGSQILVNVIVPDEIIPHHSLISPNPYYGTAMALVTSEIEVLSQKEWYLKLEQDPAQCRAIALQLQDKLRMMQQRIDQLTEVSPAEKLRKLQRWFHSYIAPATLTDVLTQEEIGQFIGLRRETINRLLRASSAPSAKDGDDNASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E955</accession>
    <name>E3E955_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373795.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5325"/>
    <dbReference type="EnsemblBacteria" id="ADO59262">
        <property type="protein sequence ID" value="ADO59262"/>
        <property type="gene ID" value="PPSC2_24920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5281"/>
    <dbReference type="eggNOG" id="COG5184">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005210_8_0_9"/>
    <dbReference type="OMA" id="WSWGTND"/>
    <dbReference type="OrthoDB" id="308036at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00415">
        <property type="entry name" value="RCC1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00633">
        <property type="entry name" value="RCCNDNSATION"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="SSF50985"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168657" evidence="1">
        <location>
            <begin position="26"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="41390" checksum="A3D20D69EC0666FE" modified="2011-01-11" version="1">MLKKLALTALAASTLLVGSSITASADSAVNYDHLLSAGTTNAYLAMEDGSSFYATGSNGNGKLGVGAGGGNNKTSPMQADVSDIAMIDAGDLHSTLLKKDGTIWSWGFASYGELGTGNKRDTAKVPVKNKYIDNVKEVRAGGQFTLALKNDGTVWAYGENNFGQLGIGTKGVSAFSVKPVQVQGLEDIVAIDAGDSFGAALDKNNQLWVWGRGYDGALGQDDKENQLTPVQYRIDDIKTFTAGADRIYVLTNSGEVYASGSNTSGKLGDGTSTFRRSPVLINISDVNRLKAGKTQTFALKNDGTLWGWGTNNEGQVGDGTDVFSVKVPSQVVDDTNTPLTDVVAFSAAGTHSHALTADGTVWSWGFNRNGELGIGNTKQQNAATKTNFPNPFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9B8</accession>
    <name>E3E9B8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Endopolygalacturonase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">picA</name>
        <name evidence="5" type="ORF">PPSC2_16065</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371977.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03755"/>
    <dbReference type="CAZy" id="GH28">
        <property type="family name" value="Glycoside Hydrolase Family 28"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57391">
        <property type="protein sequence ID" value="ADO57391"/>
        <property type="gene ID" value="PPSC2_16065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3433"/>
    <dbReference type="eggNOG" id="COG5434">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016031_8_3_9"/>
    <dbReference type="OMA" id="VTISNCV"/>
    <dbReference type="OrthoDB" id="593041at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004650">
        <property type="term" value="F:polygalacturonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000743">
        <property type="entry name" value="Glyco_hydro_28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00295">
        <property type="entry name" value="Glyco_hydro_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00502">
        <property type="entry name" value="POLYGALACTURONASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="453" mass="50174" checksum="86AE018630F5ADB7" modified="2011-01-11" version="1">MQLYNIVDYGAVQDGTKMATEAIAAAIEAASNAGGGTVFVPAGTYLTGAIFLKSNIELHVSPGAILSFSTELADYPVVESRWEGVQREVHASCIYGENLENISITGSGTLDGNGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIPCENITITNCTMVHGHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEVICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDISMAKNAIPGRPAMMTGIEDMNNRGFYLGNVKDIRFQQVTIENHEGPAFYIENGENVEINRCHSKNTAQPEKLIEQVTVQPSEQNVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9G1</accession>
    <name>E3E9G1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Chaperone protein DnaJ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dnaJ</name>
        <name evidence="11" type="synonym">dnaJ1</name>
        <name evidence="11" type="ORF">PPSC2_17005</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 2 Zn(2+) ions per monomer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="7">The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DnaJ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372174.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04340"/>
    <dbReference type="EnsemblBacteria" id="ADO57592">
        <property type="protein sequence ID" value="ADO57592"/>
        <property type="gene ID" value="PPSC2_17005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3631"/>
    <dbReference type="eggNOG" id="COG0484">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017633_0_7_9"/>
    <dbReference type="OMA" id="DLHCTVT"/>
    <dbReference type="OrthoDB" id="1738789at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031072">
        <property type="term" value="F:heat shock protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10719">
        <property type="entry name" value="DnaJ_zf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01152">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012724">
        <property type="entry name" value="DnaJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001305">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036410">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00684">
        <property type="entry name" value="DnaJ_CXXCXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="SSF49493"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="SSF57938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02349">
        <property type="entry name" value="DnaJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51188">
        <property type="entry name" value="ZF_CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 7" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 7 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 7" id="KW-0346">Stress response</keyword>
    <keyword evidence="5 7 8" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 7 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="J" evidence="9">
        <location>
            <begin position="6"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="CR-type" evidence="10">
        <location>
            <begin position="131"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="repeat" description="CXXCXGXG motif" evidence="7">
        <location>
            <begin position="144"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="repeat" description="CXXCXGXG motif" evidence="7">
        <location>
            <begin position="161"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="repeat" description="CXXCXGXG motif" evidence="7">
        <location>
            <begin position="187"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="repeat" description="CXXCXGXG motif" evidence="7">
        <location>
            <begin position="201"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CR-type" evidence="8">
        <location>
            <begin position="131"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="161"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="40934" checksum="06DE366B5AD9817A" modified="2011-01-11" version="1">MADKRDYYEVLGVAKGASDEEVKKAYRKLARQYHPDVNKAADAEAKFKEVKEAYDVLSDGQKRARYDQYGHVDPNQGMGGGFGGADFGGGFGDIFDMFFGGGNGRRDPNAPQRGNDLQYTMTIEFKEAVFGKETDIQIERTETCDTCHGTGAKAGTQPQTCSVCHGSGQEEVVQNTPFGRMVNRRACSNCGGSGKIIKEKCTTCSGSGRVRKKRKIHIRIPAGVDDGAQMRINGEGEGGVNGGPAGDLYVVFRVKSHDFFEREGDDIYCEIPLTFSQAALGDEVEIPTLTEKVKLKVPAGTQTGTYFRLKGKGVPKLRGVGQGDQHIKVVVVTPSKLSEEQKDLLRQFSSLSGEQTHENEQSFFDRVKRAFRGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9G8</accession>
    <name>E3E9G8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Heme chaperone HemW</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">hemN3</name>
        <name evidence="11" type="ORF">PPSC2_17035</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the anaerobic coproporphyrinogen-III oxidase family. HemW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372181.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04370"/>
    <dbReference type="EnsemblBacteria" id="ADO57599">
        <property type="protein sequence ID" value="ADO57599"/>
        <property type="gene ID" value="PPSC2_17035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3638"/>
    <dbReference type="eggNOG" id="COG0635">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027579_1_1_9"/>
    <dbReference type="OMA" id="HIPWCVR"/>
    <dbReference type="OrthoDB" id="1130951at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004109">
        <property type="term" value="F:coproporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006779">
        <property type="term" value="P:porphyrin-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034505">
        <property type="entry name" value="Coproporphyrinogen-III_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010723">
        <property type="entry name" value="HemN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004559">
        <property type="entry name" value="HemW-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13932">
        <property type="entry name" value="PTHR13932"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06969">
        <property type="entry name" value="HemN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00562">
        <property type="entry name" value="HemN-like__clustered_with_heat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00539">
        <property type="entry name" value="hemN_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="8 9" id="KW-0143">Chaperone</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 9" id="KW-0349">Heme</keyword>
    <keyword evidence="6 9" id="KW-0408">Iron</keyword>
    <keyword evidence="7 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="10">
        <location>
            <begin position="9"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="395" mass="45097" checksum="B1748FB22C3A074F" modified="2011-01-11" version="1">MTASIQKHEYSSAPQAVYLHIPFCTNKCFYCDFNSYVLKDQPVMEYLYALEREMEHTVKLHPPGEIKTIFVGGGTPTTLNPKEMEYFLRSVRTYFPNWAEDIEFSMEANPGTTDFEKLSVMKEGGVNRLSFGVQAFQNDLLTGIGRIHSTDDVYRSLENARKAGLDNLSIDLMFGLPNQTVDMLDESVSRALELDLPHYSIYSLKVEENTLFHTLYQKNQLPLPHEDDELEMYLLLMRRMKEAGYEQYEISNFAKPGLGSKHNMTYWRNEDYYGLGAGAHGYVGRERHMNIKGINPYVEATRNGLPRLDSFEVPTAEAMEDFLMVGLRMLEGVSKSRFEAQFGQTLEDTFTVPLRKMLNAGLIESIEDGYRLSERGILFGNDVFAEFIGSITVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9M9</accession>
    <name>E3E9M9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_18070</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57819.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025679277.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05395"/>
    <dbReference type="EnsemblBacteria" id="ADO57819">
        <property type="protein sequence ID" value="ADO57819"/>
        <property type="gene ID" value="PPSC2_18070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3861"/>
    <dbReference type="eggNOG" id="ENOG5033S5H">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1110555_0_0_9"/>
    <dbReference type="OMA" id="PDYSFTY"/>
    <dbReference type="OrthoDB" id="942819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003409">
        <property type="entry name" value="MORN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02493">
        <property type="entry name" value="MORN"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00698">
        <property type="entry name" value="MORN"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168665" evidence="2">
        <location>
            <begin position="37"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57819.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27848" checksum="6A592D6E2428F698" modified="2015-05-27" version="2">MQKLWQKGKALSLPIVVSASLISGTLLVNNIPTVNAAATKELLQLSGQTTYYGEVENGQPNGRGTIKWSEYKQYSGDFVNGKRSGTGKYMNQYTDADGQHHKVVYNGTWSNDTMSGKGTQTEKVTQSDGTIRSNQIQVGTFQDNGLQNGYQVIHAVADPDYSFTYKNGKEVLNILHSNQDLVQRWQQGELFSVNYKNGSVQKEYSMFPEEVATKERQRQAAIKYLKGITAKVTPHLQQFEKLSKQVPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9N3</accession>
    <name>E3E9N3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aspartate aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ykrV3</name>
        <name evidence="3" type="ORF">PPSC2_18090</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372403.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05415"/>
    <dbReference type="EnsemblBacteria" id="ADO57823">
        <property type="protein sequence ID" value="ADO57823"/>
        <property type="gene ID" value="PPSC2_18090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3865"/>
    <dbReference type="eggNOG" id="COG0436">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_4_5_9"/>
    <dbReference type="OMA" id="FYLYVEI"/>
    <dbReference type="OrthoDB" id="417859at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="33"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="391" mass="42472" checksum="95C382BEDB14187C" modified="2011-01-11" version="1">MIFSSSDLVKALPDNYFSAIDDKVNLYKSKGIDVINLAAGNPDQPTPPHIISALKDAVDQPINQGYPPFHGKKSTLEAVAAFYKREYQVELDPEREVAVFNGSAIGVMGIPQALLNPGDWLLTTDPAYPQYYSATALARAHIHTIPLKEKHGFLPDYTTVPEEIAEQVKLLMINYPNNPTGAVATVDFLTKTLDYAARYQFPVMNDFAYGALGFGGHKPISLLQIPGGKEYGVETYTASKTYNMAGWRFGFAVGNASVIGALKHYHTHAYSTVFGAVQDAGAVALLGTQEPVRELAALYERRRDVLIAALRNIGWDVAAPQGSFFAWFKVPEGYTSASFANFLLDEAHVAVAPGEGFGRAGASHVRVSLVNSEERLLEAVQRIAATGVFQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA45</accession>
    <name>E3EA45_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NADH dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yutJ</name>
        <name evidence="3" type="ORF">PPSC2_20485</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372908.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07740"/>
    <dbReference type="EnsemblBacteria" id="ADO58337">
        <property type="protein sequence ID" value="ADO58337"/>
        <property type="gene ID" value="PPSC2_20485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4369"/>
    <dbReference type="eggNOG" id="COG1252">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021377_7_2_9"/>
    <dbReference type="OMA" id="ISDHHIR"/>
    <dbReference type="OrthoDB" id="403436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003954">
        <property type="term" value="F:NADH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006116">
        <property type="term" value="P:NADH oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="PTHR43706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="2">
        <location>
            <begin position="3"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="355" mass="39670" checksum="12AC48018DB54B26" modified="2011-01-11" version="1">MKNFVILGGGYGGLTIAKELLDKHIPDNIQVILVDRMPFQGLKTEYYALAAGTVSDFDLRVHFPDEQRLIRKYGEVTSMDLENKMVHFQDGEPLPYDQLVIALGCTDRFHNTPGAEEYSCTIQSFNHTRQTYLRLNEIKPYGHVHIVGGGLSGVEIAAELRESRADLNITIMDRGERVLSAFPQRLSAYVHAWFKEHHVNALNHVAVSRIEPGAIYNRDEQIMTDAVVWTAGIQPVKIVQDLAVPKDPQGRIVLNEYYQIPDHPEVYVVGDCASLPYSPSAQAAEVQGEQIAHIVRDLWKGQTPHPHPLKLRGTLGALGKKAGFGYGFMGSTSLRGRVPRLLKSGVLWKSKRHFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAS4</accession>
    <name>E3EAS4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sirohydrochlorin cobaltochelatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cbiX</name>
        <name evidence="4" type="ORF">PPSC2_23690</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373524.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11195"/>
    <dbReference type="EnsemblBacteria" id="ADO58988">
        <property type="protein sequence ID" value="ADO58988"/>
        <property type="gene ID" value="PPSC2_23690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5014"/>
    <dbReference type="eggNOG" id="COG2138">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056929_0_0_9"/>
    <dbReference type="OMA" id="TANCDNC"/>
    <dbReference type="OrthoDB" id="1573073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002762">
        <property type="entry name" value="CbiX-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01903">
        <property type="entry name" value="CbiX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="282"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="291"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="316"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="358" mass="40195" checksum="FEB94678F267F17D" modified="2011-01-11" version="1">MDAILLVGHGSRDPEGNQELLEFAQAVADQAPGTCVETCFLELARPSIAEGVQACVEKGATRVVLIPIILFAAVHAKIDIPMAIDRAKAKYPQVEFVYGRPIGVHEKIVSILLDRLKETRPVAVPAGMHSAVEASAEVSNEETAVLVLGRGSSDPDANSDFFKITRMLWEKLSYTWIESSFIGVTQPSFPDGLERCVRLGAKKIIVLPYFLFTGVLIKRIEEMTQEFAEAHPALQVEMGGYFGFHPQLVELVLERANEGLFGKVTANCDNCQFRLEAQEHHHHHHDHDHDHHHQHDHDNDHDHHHDHDHHAREHDHHHEHHTHHHAHDHVHAHSHNDHDHDHSHTPSVVNVTGQVNGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBD7</accession>
    <name>E3EBD7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA polymerase sigma70</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">deoR</name>
        <name evidence="3" type="ORF">PPSC2_21865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SorC transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58611.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905792.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09010"/>
    <dbReference type="EnsemblBacteria" id="ADO58611">
        <property type="protein sequence ID" value="ADO58611"/>
        <property type="gene ID" value="PPSC2_21865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4651"/>
    <dbReference type="eggNOG" id="COG2390">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054506_1_1_9"/>
    <dbReference type="OrthoDB" id="1390156at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007324">
        <property type="entry name" value="Sugar-bd_dom_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04198">
        <property type="entry name" value="Sugar-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH crp-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58611.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="35068" checksum="D7BE3B07EDDDA070" modified="2015-05-27" version="2">MDHEKQRLSIEAARLYYLNDYSQQDIAVRLGVSRPTVSRLLQAAKEQGYVRISIVDPMEDMDALGEQVKKKYGLDTVLVCYSPLNEYQEIKKHISKKAADYLHETVQDADIIGVTWGTTMHAVALHLQQKQVKGVEVVQLKGGVSHSHVNTYAVETVNLFAEAFNTIARYLPLPVIFDSQAVKRMVEKDRHIQRIIQLGKQANIAVFTVGTVKEDALLFRLGYFNHEEQKLPQKIGKGDICSRFFDDEGNICSQEINSRTVGIDLPELRKKEKSILVAGGQRKVEAIRASLRGKYANILVTDQFTAQALLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBY6</accession>
    <name>E3EBY6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373645.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59110">
        <property type="protein sequence ID" value="ADO59110"/>
        <property type="gene ID" value="PPSC2_24240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5133"/>
    <dbReference type="eggNOG" id="ENOG50305V3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_751928_0_0_9"/>
    <dbReference type="OrthoDB" id="2132510at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168748" evidence="1">
        <location>
            <begin position="29"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="41574" checksum="C0F09ECA1E3927D3" modified="2011-01-11" version="1">MFRKNKFFGVGLATILMCSAFSGSLAYAEPKATKYDASFFENLKQRAIVHELQEHQIAVNPKASIAELLNTADSTSLKSKSNSDLQQNLEKLNKSEYIYLTLDGEVYSSEKGYVGMADKVESKEDSVTDATYMKTNSLSEPSNNHDVSISSKYNPTPSQVSGGTTGAFSRVQLDYDGFDGVNARVILPRAEDLGANEQPWAYYGFDAKNGRKIEGGFSFQTGQKRYLGYIKNGDYRYSTESWVNYEGFNSVKFYIDNSTYNAYLLAYYNQIVVMQTSFDSSDLSSMSVKRVTAIAKKNFDGSNIYGSAINGEFSELVVSKFNSDYYYPWDDYRDYSFWDGSQWFGTIDWPADYITHFGPSVWIRNPNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC25</accession>
    <name>E3EC25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lytR9</name>
        <name evidence="4" type="ORF">PPSC2_25390</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LytR/CpsA/Psr (LCP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59365.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324927.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12885"/>
    <dbReference type="EnsemblBacteria" id="ADO59365">
        <property type="protein sequence ID" value="ADO59365"/>
        <property type="gene ID" value="PPSC2_25390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5381"/>
    <dbReference type="eggNOG" id="COG1316">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016455_2_2_9"/>
    <dbReference type="OrthoDB" id="491753at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004474">
        <property type="entry name" value="LytR_CpsA_psr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03816">
        <property type="entry name" value="LytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00350">
        <property type="entry name" value="lytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="LytR_cpsA_psr" evidence="3">
        <location>
            <begin position="104"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59365.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="353" mass="40388" checksum="7725004D1DEBC11D" modified="2015-05-27" version="2">MMERRHKRRTRGKPKKKKRFTALYISCIVLLLVAVGGYLFRKQLTLVAFDWFVSPTLESKLEKSYQPRQSAEQQPQEKVAYQKEPFSVLLLGTDQRPNEKARGRSDTVIYAAVRPAESRVLLVSIPRDTYVQIAGHDSNRDGEDDFDKLGHAYAFGGEDMSMATVEKLMEHKVDYYATINFQGIQDAVNAVGGVVLPIDQPIENKNPLHIKFRIEAGKPLYNGEEAMYYVRYREDSDFNRTKRQQIFLNAMADRLLNIDGITKIPELLDIMGANFTTDMEPAFITRLGKQAISQGNPQISSFTITGEGFKKKGLYYDRANEQELEYARLMIANWLDSDTTPQTLRLPDKQDIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC37</accession>
    <name>E3EC37_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373907.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5441"/>
    <dbReference type="EnsemblBacteria" id="ADO59377">
        <property type="protein sequence ID" value="ADO59377"/>
        <property type="gene ID" value="PPSC2_25445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5392"/>
    <dbReference type="eggNOG" id="ENOG50331FV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_158501_0_0_9"/>
    <dbReference type="OMA" id="WISGIFE"/>
    <dbReference type="OrthoDB" id="2039234at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="11556" checksum="B12AE1B1B345B830" modified="2011-01-11" version="1">MSYSRILKWISGIFELVLAVPIVGGAIVMGTGYSALGFMLVLHAVTLILSLRNQEAIYGSVWGVITSLLAWIPFVGWALHLIAAILLMISGSKRTKRYHYPPNQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC80</accession>
    <name>E3EC80_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AslA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">aslA</name>
        <name evidence="1" type="ORF">PPSC2_01195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368866.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0236"/>
    <dbReference type="EnsemblBacteria" id="ADO54223">
        <property type="protein sequence ID" value="ADO54223"/>
        <property type="gene ID" value="PPSC2_01195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.228"/>
    <dbReference type="HOGENOM" id="CLU_2448534_0_0_9"/>
    <dbReference type="OMA" id="CMELFEL"/>
    <dbReference type="OrthoDB" id="2182314at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008792">
        <property type="entry name" value="PQQD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041881">
        <property type="entry name" value="PqqD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05402">
        <property type="entry name" value="PqqD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="87" mass="9973" checksum="F9A04A1B197FDD65" modified="2011-01-11" version="1">MNFNENTILRKNPDISTRNYLKSTIIEPGITLNEVATNLFERIDGIRTLAEICKDMVKEYEVDYQTILGDSVELVQGLIEKNIILVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECD6</accession>
    <name>E3ECD6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NmrA family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nmrA</name>
        <name evidence="2" type="ORF">PPSC2_01460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368921.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0294"/>
    <dbReference type="EnsemblBacteria" id="ADO54279">
        <property type="protein sequence ID" value="ADO54279"/>
        <property type="gene ID" value="PPSC2_01460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.289"/>
    <dbReference type="eggNOG" id="COG0702">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_10_1_9"/>
    <dbReference type="OMA" id="GWYWENY"/>
    <dbReference type="OrthoDB" id="1616572at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008030">
        <property type="entry name" value="NmrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05368">
        <property type="entry name" value="NmrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NmrA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="36010" checksum="3BA2C1D3B413591C" modified="2011-01-11" version="1">MRYIITGVDGQLASRVAETVLEEVDGHNLTFTCMKKDRIPKARVQRWENAGVKIFEINYDDIPSMERAFKNGDRIYIVSGLEVGKRVQQHKNAIDTAIKAGISHITYSSFIGATDPKYAHVFVTPDHTATENYLKSTGIAYNAMRNNLYLENYLTMYPMLALMSDNKWLSTAGEGRATLVHKDDCARAAAAALLGKGEDNKAYNIVGSESVSVRDLCNLIKEISCKDLEYIPVNPEQYYEYLKKLHIPKEITGDFSQSPVPFCGEDLMTTDASIQEGLLNVESNAIELLTGQKPKTAKDIVEKYKYIWEENIQNWRDMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECD9</accession>
    <name>E3ECD9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">insK1</name>
        <name evidence="1" type="ORF">PPSC2_01470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368924.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54282">
        <property type="protein sequence ID" value="ADO54282"/>
        <property type="gene ID" value="PPSC2_01470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.291"/>
    <dbReference type="eggNOG" id="COG2801">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2602745_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="8739" checksum="0A93B273AC477CDB" modified="2011-01-11" version="1">MGNSVGYPDLFNNGIVAWRLSQRNDLALVNETLDALSKDVNIEGVILHSDQGFQYTSKPFNRKLKSSESLEAIPGEETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECK3</accession>
    <name>E3ECK3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">Signal peptidase I</fullName>
            <ecNumber evidence="4 7">3.4.21.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">sipS1</name>
        <name evidence="11" type="ORF">PPSC2_03935</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins.</text>
            <dbReference type="EC" id="3.4.21.89"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Membrane</location>
            <topology evidence="8">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the peptidase S26 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.89" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369411.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16740"/>
    <dbReference type="EnsemblBacteria" id="ADO54775">
        <property type="protein sequence ID" value="ADO54775"/>
        <property type="gene ID" value="PPSC2_03935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.782"/>
    <dbReference type="eggNOG" id="COG0681">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028723_5_1_9"/>
    <dbReference type="OMA" id="RAEFIFW"/>
    <dbReference type="OrthoDB" id="1741894at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000223">
        <property type="entry name" value="Pept_S26A_signal_pept_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019757">
        <property type="entry name" value="Pept_S26A_signal_pept_1_Lys-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019756">
        <property type="entry name" value="Pept_S26A_signal_pept_1_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43390">
        <property type="entry name" value="PTHR43390"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10502">
        <property type="entry name" value="Peptidase_S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00727">
        <property type="entry name" value="LEADERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02227">
        <property type="entry name" value="sigpep_I_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00501">
        <property type="entry name" value="SPASE_I_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00760">
        <property type="entry name" value="SPASE_I_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 7" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S26" evidence="10">
        <location>
            <begin position="27"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR600223-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF10502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="22047" checksum="F464880CD39C6E1B" modified="2011-01-11" version="1">MDALTPSSDLLPSPETSKQAGRSGYIRDWLVTLLIAMIVLLLLNLFVFNLSTVRGHSMQPTLTESQHLFVNKLVYNFHDPGRGDIVILKDPDSKLSSPRFLVKRVIGIPGDVIRIEHNHLYVNGELLNEPYTNSDVEDGDYGPFTVEPEHFFVMGDNRHTAASKDSRYFGSVKSEDLLGRAEFIFWPISEWKWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECK5</accession>
    <name>E3ECK5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Methylated-DNA--protein-cysteine methyltransferase</fullName>
            <ecNumber evidence="7">2.1.1.63</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">6-O-methylguanine-DNA methyltransferase</fullName>
            <shortName evidence="7">MGMT</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">O-6-methylguanine-DNA-alkyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yhbA</name>
        <name evidence="10" type="ORF">PPSC2_03945</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a 4-O-methyl-thymidine in DNA + L-cysteinyl-[protein] = a thymidine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:53428"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:13555"/>
            <dbReference type="Rhea" id="RHEA-COMP:13556"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:137386"/>
            <dbReference type="ChEBI" id="CHEBI:137387"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a 6-O-methyl-2'-deoxyguanosine in DNA + L-cysteinyl-[protein] = a 2'-deoxyguanosine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:11367"/>
            <dbReference type="Rhea" id="RHEA-COMP:11368"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:85445"/>
            <dbReference type="ChEBI" id="CHEBI:85448"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="7">This enzyme catalyzes only one turnover and therefore is not strictly catalytic. According to one definition, an enzyme is a biocatalyst that acts repeatedly and over many reaction cycles.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MGMT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.63" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369413.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16750"/>
    <dbReference type="EnsemblBacteria" id="ADO54777">
        <property type="protein sequence ID" value="ADO54777"/>
        <property type="gene ID" value="PPSC2_03945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.784"/>
    <dbReference type="eggNOG" id="COG0350">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1600">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030790_3_0_9"/>
    <dbReference type="OMA" id="ICDTDLS"/>
    <dbReference type="OrthoDB" id="1478472at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003908">
        <property type="term" value="F:methylated-DNA-[protein]-cysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006307">
        <property type="term" value="P:DNA dealkylation involved in DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06445">
        <property type="entry name" value="ATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00772">
        <property type="entry name" value="OGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014048">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036217">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNAb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008332">
        <property type="entry name" value="MethylG_MeTrfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023546">
        <property type="entry name" value="MGMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036631">
        <property type="entry name" value="MGMT_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004155">
        <property type="entry name" value="PBS_lyase_HEAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004453">
        <property type="entry name" value="QueG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013542">
        <property type="entry name" value="QueG_DUF1730"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30002">
        <property type="entry name" value="PTHR30002"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01035">
        <property type="entry name" value="DNA_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08331">
        <property type="entry name" value="DUF1730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02870">
        <property type="entry name" value="Methyltransf_1N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00567">
        <property type="entry name" value="EZ_HEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46767">
        <property type="entry name" value="SSF46767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53155">
        <property type="entry name" value="SSF53155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00589">
        <property type="entry name" value="ogt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00276">
        <property type="entry name" value="TIGR00276"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="9">
        <location>
            <begin position="192"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="387"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; methyl group acceptor" evidence="7">
        <location>
            <position position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="577" mass="63826" checksum="1CEAC88DDC9E5E01" modified="2011-01-11" version="1">MQRELTRTATGTASTWASLKQEIIEAAPGLGIDSIGFASADPFLSLKAILEEHRAKGYESGFEEPDIDKRIYPELYGSQPASLIAIAVAYPSKMKDPPKSDKGKYRGILARSAWGKDYHLVLREAMEKLEAFISERVPDAILKNMVDTGELSDRAVAERAGIGFSGKNTMMISPTLGSWIYLGELLTNIPFQPDEPVTDGCGECTKCLDACPTGALVGPGQLNAQRCVSFLTQTKGFLDEEFMLKIGNRLYGCDTCQIVCPKNRGLNWAHHPELTPDPEIVKPLLLPLLDLSNREFKDRFGQSAAAWRGKKPIQRNAVIGLGNFKDVSAVPKLTEVLLDDPRPELRGTAAWALSRIGGENAMTAIKQASEKEQHEQVREMIAQAHSKLEEQEQAEQQTSAELKAEDSQGPTTIYYDEMETPVGTLTLCATDRGLCRIDYGSFYAKEALLQQWARTWVGEYVYVQEPEKLREAAEQLREYFAGERREFSIAYDLRGTPFQEQVWRALQNIPYGQSVSYQDIAESIGRAKAVRAVGGANNKNPLPILFPCHRVSGANGSLVGYAGGLPVKMKLLELEKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECM0</accession>
    <name>E3ECM0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-940</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-940</name>
        <name evidence="1" type="ORF">PPSC2_04010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369427.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16810"/>
    <dbReference type="EnsemblBacteria" id="ADO54792">
        <property type="protein sequence ID" value="ADO54792"/>
        <property type="gene ID" value="PPSC2_04010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.799"/>
    <dbReference type="eggNOG" id="ENOG503243I">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2233819_0_0_9"/>
    <dbReference type="OMA" id="TEFNSVC"/>
    <dbReference type="OrthoDB" id="1839174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="12092" checksum="AEA9A469F984DC81" modified="2011-01-11" version="1">MGFQTEFNSVCKFKSEQELYELLEYGRGKMVKSGLRVFPTGQKVIAYSVDNVAVAIVQIVGCIAEINFQGDEVTEVEMTLIRKLNEEESRIQTALADEMFFGIQQQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECP6</accession>
    <name>E3ECP6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">SnoaL polyketide cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">M1-493</name>
        <name evidence="4" type="ORF">PPSC2_01740</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368980.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14530"/>
    <dbReference type="EnsemblBacteria" id="ADO54340">
        <property type="protein sequence ID" value="ADO54340"/>
        <property type="gene ID" value="PPSC2_01740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.349"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4922">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_679429_0_0_9"/>
    <dbReference type="OMA" id="YIQHNLA"/>
    <dbReference type="OrthoDB" id="366828at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030638">
        <property type="term" value="P:polyketide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009959">
        <property type="entry name" value="Cyclase_SnoaL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38436">
        <property type="entry name" value="PTHR38436"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168825" evidence="1">
        <location>
            <begin position="25"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="52"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="SnoaL-like" evidence="3">
        <location>
            <begin position="159"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="405" mass="44006" checksum="1DA2F6831FC24485" modified="2011-01-11" version="1">MKKHTVTAALAGLLVLSSAVPALAADVKPATGIQVWVDGKKEAYKIAPIVRNKQVLIPLRQLATSLGIPLDAKHITFNTARQSTTIRYDQATVVLVSGSPEAQINGIKVPLSTSTILTKQGVTYVPVDVVKEAWGKQVIWDPASQTLQIGVSNKDKVVEILKSFETGNTKAAEAWISKDQYIQHNPSFASGRDAFLQGISHSKGANVLVEVQRVIQDGNDVAVHYKKSIAGKTSIGFDIFRFDSNGKIVEHWDNMQDSAPTNPSGHTMIDGTTQITDLNQTETNKTLIRKFVDDVLVGKNRAALESYYNGDQYIQHNPLFGDGVSSLKQALSAAGQGASIGYDQVHMVLGEGNFVLVVSELKSPKGTSAAVYDLFRVENGKIAEHWDVVKEIPAKTEWKNTNGKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECQ7</accession>
    <name>E3ECQ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-503</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-503</name>
        <name evidence="2" type="ORF">PPSC2_01790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368991.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0367"/>
    <dbReference type="EnsemblBacteria" id="ADO54351">
        <property type="protein sequence ID" value="ADO54351"/>
        <property type="gene ID" value="PPSC2_01790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.360"/>
    <dbReference type="eggNOG" id="ENOG50306WP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1208849_0_0_9"/>
    <dbReference type="OMA" id="LPYISIW"/>
    <dbReference type="OrthoDB" id="2109859at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="128"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="26493" checksum="1835562CB63041E8" modified="2011-01-11" version="1">MGQVIRALVQFEVLLMKKSVVFFIALTFSCFLIPLFLYLGAGNKNNTLWIFLHHGQMFFTILLMPLMYSVLYDGEKQKMISSVIMPKLPKGAQYFYCKSCVLWGVVCLFQFVALAIFCVVQWTTHGKAPFLILLHLTVAGVATMGYSVQITVILNLLLRKQLYVNIVMLVYLLISITINLPYISIWFNPDWIISNFFTQSFAFGRVFLFLLMWVLMKVSNHLWMARVQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECZ4</accession>
    <name>E3ECZ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tlp</name>
        <name evidence="3" type="ORF">PPSC2_04350</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369497.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17160"/>
    <dbReference type="EnsemblBacteria" id="ADO54863">
        <property type="protein sequence ID" value="ADO54863"/>
        <property type="gene ID" value="PPSC2_04350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.867"/>
    <dbReference type="eggNOG" id="ENOG5032ZH6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_178266_0_0_9"/>
    <dbReference type="OMA" id="MAKPDDR"/>
    <dbReference type="OrthoDB" id="2038474at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01506">
        <property type="entry name" value="Tlp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017524">
        <property type="entry name" value="SASP_thioredoxin-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19824">
        <property type="entry name" value="Tlp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03090">
        <property type="entry name" value="SASP_tlp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0749">Sporulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="43"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8780" checksum="5408FED66685F651" modified="2011-01-11" version="1">MAKPDNRADNVEHLQQNIQNTLQNLHEAEGYLNEFSSEISNEERKQIEEKNNRRKQSIRSFREEVKDEAAHSQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED45</accession>
    <name>E3ED45_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">M1-554</name>
        <name evidence="4" type="ORF">PPSC2_02170</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369042.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14935"/>
    <dbReference type="EnsemblBacteria" id="ADO54402">
        <property type="protein sequence ID" value="ADO54402"/>
        <property type="gene ID" value="PPSC2_02170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.411"/>
    <dbReference type="eggNOG" id="COG4085">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_509809_0_0_9"/>
    <dbReference type="OMA" id="GIAKNGY"/>
    <dbReference type="OrthoDB" id="233735at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039975">
        <property type="entry name" value="IFT52"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045939">
        <property type="entry name" value="YhcR_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12969">
        <property type="entry name" value="PTHR12969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19886">
        <property type="entry name" value="DUF6359"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="DUF6359" evidence="3">
        <location>
            <begin position="41"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="147"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="498"/>
            <end position="522"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF19886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="534" mass="56791" checksum="A8B2D5A1C1318786" modified="2011-01-11" version="1">MVKGLRFTGSRLKGVLHLAAIVSLLIGIFVPFGQVKAEGALTVAEALQRQGSGGTVTVEGYIVGHATGSKTANFSSPFANDFNVLIADQANERSTSNLLDVQLTSAYRGQFGLTGHPELIGNKIRVTGTLGAYNNFGGVKSPSAVELVNGSEPGEPGEPGEPNPGNPGQPGTTLPDGKGKKVLFDNTHAQTAGAADWVIEGAFSDFANGLRNVGFTVDQLNRPIPFTYGEQAITYDKLRQYDVFIIGEANVAFKASEQAALLQYVNNGGSVFFISDHYNADRNKNRWDSSEVMNGYRRGAYTNPAKGMTTEEAASPAMQGLTSSDWLATNFGVRFRYNALGDVNATDIVAADQSFGITKGVRSIAMHAGSTLAIIDPTKAKGIAYIPTGTNKWGNAVDQGVYNGGGRAEGPYAAISKVGQGKAAFIGDSSPVEDATPKYAREENGQSKKTYDGFKEVDDATFLVQTVQWLAWKQDYTKLSDVAGLTLDQPTKLLPFEEPAASTEPQPEPWSAPAAGYKWYDPKTFKSGSYGAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDG3</accession>
    <name>E3EDG3_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Limonene hydroxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-1079</name>
        <name evidence="1" type="ORF">PPSC2_04705</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17600"/>
    <dbReference type="EnsemblBacteria" id="ADO54942">
        <property type="protein sequence ID" value="ADO54942"/>
        <property type="gene ID" value="PPSC2_04705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.945"/>
    <dbReference type="eggNOG" id="ENOG502Z968">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038544_0_0_9"/>
    <dbReference type="OMA" id="RERNGAC"/>
    <dbReference type="OrthoDB" id="1469998at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="522" mass="59812" checksum="A2009800B18604BD" modified="2011-01-11" version="1">MFGRFKNEVLYPWVGKLSIYETIKQGLDPQGRLTDDHLPDDEEYWAGHKMRWVAGGLDGAFGHHGAGGDGETDKIKDLAQLLSRQCRKPGMKTRRETYVRLMEENALSLIDPLLDAVREHPAIQPDRLYEEARWLAEHGAHRNVVKFGIALLGLLETDQHHELILTLAKHDEFTLYAAVAIRNISEQANEQLYRLASQVHGWGRIHVVERLEPTRQEIRDWLLREGFRNNVMYEYLAYECAHKGELHTAIAVPHIDQELFDGAGDILSALLAAGGPAESIDDYEHAAMVIGNYLRHAKAMCTTVKHFTIIMDIADFLGEEDDSWEARYEHEWTPELRKRYASICQQMMDDPQWVKPVEQELQHANSPHLHYAIRVARMLALDVWPVLFDQLSQYPVKPNLYFELIRTEDEQRARKLVAFAEKRLPLEEIASGPADAPGFGPEYEAHQCLGILLQLLSSYEGMGQELVAAGLWSPVTSNRHAALHVLKEWPSEMWGEETTERLRRLSVAETEESIREQIRELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDJ4</accession>
    <name>E3EDJ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ansR5</name>
        <name evidence="2" type="ORF">PPSC2_06370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369933.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19315"/>
    <dbReference type="EnsemblBacteria" id="ADO55302">
        <property type="protein sequence ID" value="ADO55302"/>
        <property type="gene ID" value="PPSC2_06370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1312"/>
    <dbReference type="eggNOG" id="COG1396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_4_4_9"/>
    <dbReference type="OMA" id="NFGDWKR"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="124" mass="14300" checksum="31E873D0CFECD592" modified="2011-01-11" version="1">MQSIYQRIEELIKERGMTKKAFCQQLGISTGNFGDWKRGKTTPGTNKLIEIASFFNASLDWIMLGRDVQSKVLKESQDPYFFGASGQLNCQGESLSEAERDFILEYIEFTRFRKEKNQHNSTTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDM3</accession>
    <name>E3EDM3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type II secretion protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tadC</name>
        <name evidence="2" type="ORF">PPSC2_06505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19470"/>
    <dbReference type="EnsemblBacteria" id="ADO55331">
        <property type="protein sequence ID" value="ADO55331"/>
        <property type="gene ID" value="PPSC2_06505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1340"/>
    <dbReference type="eggNOG" id="COG2064">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083256_1_0_9"/>
    <dbReference type="OMA" id="HHANKIV"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="267"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="32581" checksum="0FD619FD9793E5B9" modified="2011-01-11" version="1">MVTLVCLVMLVLQVGGWVVLNQMYTAKYAHFRHMKLEGLRLQKLSVPFVHILHVSRATHRLPLLMFKLHRSIQKLYGMRNSGEKTMLFLAEMLGYGYMVAAGGALISIMMGGEATGLVLGLGLGVLVPVALVKDLHGKVQKRDQQILMELPELLSKMMLLVGAGETVQRALLHCVERKGADTVHPLYRELLQTVGEWESGYSFQQAFEHLSKRCGIQEVTIFTTTVLLNMRRGGSDFVMALRELSQTLWSKRTSISRTRGEQASSKLVFPMALILLTVIVLVGAPALMMMNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDM5</accession>
    <name>E3EDM5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pilus assembly protein TadE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369964.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19480"/>
    <dbReference type="EnsemblBacteria" id="ADO55333">
        <property type="protein sequence ID" value="ADO55333"/>
        <property type="gene ID" value="PPSC2_06515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1342"/>
    <dbReference type="eggNOG" id="ENOG50332KY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1233584_0_0_9"/>
    <dbReference type="OMA" id="WIRTVEL"/>
    <dbReference type="OrthoDB" id="1951273at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012495">
        <property type="entry name" value="TadE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07811">
        <property type="entry name" value="TadE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="24744" checksum="C7410ACE6A3DE201" modified="2011-01-11" version="1">MLCKLVQKEDGSFSLETSLVFPILLLVIFIMLFFCLYIYQKSILVQVASTASERAAYSWDNSFKDPRTGAFAQGQRDSLYWRLKDDVMLGALFGWAGANNQESVQVPGGNEGGSLPAQKLSNAENRMPAGMHGQMTYENSMIHRKVTTELNKIVEVPLLNQFLDQTDLQGKMSSGVVEPVEWIRTVELVRYYGAKFMGRGSGEKVEPAIVGKVLMQYGQNGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDP1</accession>
    <name>E3EDP1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phnP</name>
        <name evidence="2" type="ORF">PPSC2_06595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369980.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19560"/>
    <dbReference type="EnsemblBacteria" id="ADO55349">
        <property type="protein sequence ID" value="ADO55349"/>
        <property type="gene ID" value="PPSC2_06595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1358"/>
    <dbReference type="eggNOG" id="COG1235">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044538_3_0_9"/>
    <dbReference type="OMA" id="HIHFDHL"/>
    <dbReference type="OrthoDB" id="1712770at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="37"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="256" mass="28938" checksum="1C4FA3A85D1C6077" modified="2011-01-11" version="1">MNRLIFLGTGDAMGVPRVYCDCLVCTEARTTGTNVRLRSSVLIKSETEDFMIDCGPDWRRQLELRSLRFIPTILVTHAHFDHIGGLPEWADACRWTGNRGRLYAPQEVIDTILRQFSWLPGNLDLIPVDQGVQLGGWNIRGWRVNHGKNGYAYAYRLEKDGFSWAYCSDSIGLNEAEILPLHNLNLLVLGTSFYHEKAEYATRSVYDMLEAQELVGRLKPGSTVFTHMSHDVDITYNYGLLEGISLAHTGMSLPLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDT8</accession>
    <name>E3EDT8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Thymidylate kinase</fullName>
            <ecNumber evidence="3">2.7.4.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">dTMP kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">tmk</name>
        <name evidence="5" type="ORF">PPSC2_00085</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>ATP + dTMP = ADP + dTDP</text>
            <dbReference type="Rhea" id="RHEA:13517"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58369"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the thymidylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.9" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368658.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13100"/>
    <dbReference type="EnsemblBacteria" id="ADO54004">
        <property type="protein sequence ID" value="ADO54004"/>
        <property type="gene ID" value="PPSC2_00085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.16"/>
    <dbReference type="eggNOG" id="COG0125">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049131_0_2_9"/>
    <dbReference type="OMA" id="VMTREPG"/>
    <dbReference type="OrthoDB" id="1585072at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004798">
        <property type="term" value="F:thymidylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006233">
        <property type="term" value="P:dTDP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006235">
        <property type="term" value="P:dTTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00165">
        <property type="entry name" value="Thymidylate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039430">
        <property type="entry name" value="Thymidylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018095">
        <property type="entry name" value="Thymidylate_kin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018094">
        <property type="entry name" value="Thymidylate_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02223">
        <property type="entry name" value="Thymidylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00041">
        <property type="entry name" value="DTMP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01331">
        <property type="entry name" value="THYMIDYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thymidylate_kin" evidence="4">
        <location>
            <begin position="10"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="12"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="215" mass="24245" checksum="1DDAFBE860035D08" modified="2011-01-11" version="1">MNRKGIFITLEGGDGSGKTTMIQRLAKYMEEEGHPVVTTREPGGIEISEKIRSIILDPAHTSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVASINRFAVDDWEPDATFYLDIEPELGLARINASRGEEMDRLDMESISFHHKVREAYLELARKFPERITIVDASPAPEQVEQVLKDLLKKRFIQNFSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDV3</accession>
    <name>E3EDV3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sporulation peptidase YabG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yabG</name>
        <name evidence="1" type="ORF">PPSC2_00155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54019.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599339.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13170"/>
    <dbReference type="MEROPS" id="U57.001"/>
    <dbReference type="EnsemblBacteria" id="ADO54019">
        <property type="protein sequence ID" value="ADO54019"/>
        <property type="gene ID" value="PPSC2_00155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.30"/>
    <dbReference type="eggNOG" id="ENOG502Z7P7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083246_0_0_9"/>
    <dbReference type="OMA" id="MPGKVLH"/>
    <dbReference type="OrthoDB" id="1185419at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008764">
        <property type="entry name" value="Peptidase_U57"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05582">
        <property type="entry name" value="Peptidase_U57"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF011575">
        <property type="entry name" value="YabG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02855">
        <property type="entry name" value="spore_yabG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54019.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="298" mass="32770" checksum="3DA0E4E13F3EA7EA" modified="2015-05-27" version="2">MSLGDLVVRKSYGGDVTFRVEDIQRDKAIIKGTEFRLLADSPVNDLVRVPADQISGKTQQAHIKAGESLNLLQRARQQQAARSQAALIGEWSDPVESTYFEMPGKVLHLDGDPGYLRKCLSLYEQLRVPAEGHHVHESAMADTLYRLLPRIRPDIVVITGHDGVLKQPQPYDLYSLKSYKNSQNFVAAIQVARQYERHLDSLTIVAGACQSHFEALLRAGANFASSPGRILIHALDPVYVAAKAAFTSIRDTVNMGDLFHQTISGSRGVGGIETRGSYRIGLPKLENLSTLKVTPSAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDX9</accession>
    <name>E3EDX9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">tRNA(Ile)-lysidine synthase</fullName>
            <ecNumber evidence="7">6.3.4.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">tRNA(Ile)-2-lysyl-cytidine synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">tRNA(Ile)-lysidine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tilS</name>
        <name evidence="9" type="synonym">mesJ</name>
        <name evidence="9" type="ORF">PPSC2_00280</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP + cytidine(34) in tRNA(Ile2) + L-lysine = AMP + diphosphate + H(+) + lysidine(34) in tRNA(Ile2)</text>
            <dbReference type="Rhea" id="RHEA:43744"/>
            <dbReference type="Rhea" id="RHEA-COMP:10625"/>
            <dbReference type="Rhea" id="RHEA-COMP:10670"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="ChEBI" id="CHEBI:83665"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.4.19"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="7">The N-terminal region contains the highly conserved SGGXDS motif, predicted to be a P-loop motif involved in ATP binding.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the tRNA(Ile)-lysidine synthase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.19" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368692.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13295"/>
    <dbReference type="EnsemblBacteria" id="ADO54045">
        <property type="protein sequence ID" value="ADO54045"/>
        <property type="gene ID" value="PPSC2_00280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.55"/>
    <dbReference type="eggNOG" id="COG0037">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018869_0_1_9"/>
    <dbReference type="OMA" id="QQYGMNA"/>
    <dbReference type="OrthoDB" id="666797at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01992">
        <property type="entry name" value="PP-ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01161">
        <property type="entry name" value="tRNA_Ile_lys_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012796">
        <property type="entry name" value="Lysidine-tRNA-synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011063">
        <property type="entry name" value="TilS/TtcA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012094">
        <property type="entry name" value="tRNA_Ile_lys_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012795">
        <property type="entry name" value="tRNA_Ile_lys_synt_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43033">
        <property type="entry name" value="PTHR43033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01171">
        <property type="entry name" value="ATP_bind_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11734">
        <property type="entry name" value="TilS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00977">
        <property type="entry name" value="TilS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02433">
        <property type="entry name" value="lysidine_TilS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02432">
        <property type="entry name" value="lysidine_TilS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TilS_C" evidence="8">
        <location>
            <begin position="398"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="34"/>
            <end position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="482" mass="54468" checksum="29372C11B016E4F4" modified="2011-01-11" version="1">MGTTKPTGVVQEVLALAREHSLWSPGDRIVVAVSGGPDSVALLHILHEISVIHMPLQLVCAHVHHGFRPEESDAEAEEVHNIARKLKLPFEMIRVDAPAYMKESGKGPQEAARELRYSFLHDTATKWKAQHIAMAHHGDDQAETVLLHLLRGSGPAGLAGMRLARNEKNVQLIRPLLRMYKADLIEYCNFHGFSYVTDSTNLSSKYRRNAIRMDVLPFLGQYNEQLTPSLNRLAETMADENDFMEAATLSAYEKMVHFNNGRYMFSIASYRKLSVALQRRLIKLILNYLPSGSENFDFRKIETVRLRLLQETSSTWSLDLGGGAVGVREYDQAVLFDRTQVVMGEWSYGLSVLPISGELELPEAGGILRWRRASYWDGHHPANEEEAWFDADELTLPLTVRSRLPGDTMYVMGLNGRKKVKDIFIDEKIPPLMRSVIPIVCDHSGVVLWIPGVRRSVHAAVQKHTSSVIYMSWQRRESPGHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE09</accession>
    <name>E3EE09_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-642</name>
        <name evidence="2" type="ORF">PPSC2_02670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54489.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0505"/>
    <dbReference type="EnsemblBacteria" id="ADO54489">
        <property type="protein sequence ID" value="ADO54489"/>
        <property type="gene ID" value="PPSC2_02670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.498"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086503_7_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004343">
        <property type="term" value="F:glucosamine 6-phosphate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006048">
        <property type="term" value="P:UDP-N-acetylglucosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039143">
        <property type="entry name" value="GNPNAT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13355">
        <property type="entry name" value="PTHR13355"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54489.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15111" checksum="8C91B697AD11E408" modified="2015-05-27" version="2">MLRVDYAIPAVEEYQALRKEAGLSQITEEAAAKGLPNSLFAVTLRLGQELIGMGRVSGDGGVFFLVTDIAVKPSHQGKGYGRKLMEEIMEYLKREVPAGSFATLIADKPADRLYAQFGFQLVSPRSEGMYWRQPGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE82</accession>
    <name>E3EE82_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaS4</name>
        <name evidence="5" type="ORF">PPSC2_05010</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369638.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17900"/>
    <dbReference type="EnsemblBacteria" id="ADO55005">
        <property type="protein sequence ID" value="ADO55005"/>
        <property type="gene ID" value="PPSC2_05010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1011"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="OMA" id="NDLHWHE"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="193"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="35269" checksum="563512DEE4D681E9" modified="2011-01-11" version="1">MEKQLHETILYPDVSFPYIMYTHTIHESFPKGRGFNDLHWHEELQITLVTKGKLVIQVNGIDHELDTGQAILINKGVLHVTTQLSHNGQYVSFNFPEKLLAFYADSAMEKNYVLPYTNSSLVSLVIKGDVEWQIQILQMLWEMKQKFDMKKKWGWEYEVSIKTAQLWLILISNISLSSEEAPKYVKIQQERLQLMLSFIHQNYTNNITLQEIAAIAHLSVSECTRSFKRTIHMTPYDYLIKYRIKKSSELLTSTQYTITEIAHKVGFNHVNHFIQSFKKHYKKTPKEFQKFRNDFMIKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEJ5</accession>
    <name>E3EEJ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Branched-chain amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yufP</name>
        <name evidence="7" type="ORF">PPSC2_07050</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370075.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20030"/>
    <dbReference type="EnsemblBacteria" id="ADO55446">
        <property type="protein sequence ID" value="ADO55446"/>
        <property type="gene ID" value="PPSC2_07050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1454"/>
    <dbReference type="eggNOG" id="COG4603">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040769_0_1_9"/>
    <dbReference type="OMA" id="FRMNLFN"/>
    <dbReference type="OrthoDB" id="974216at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="111"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="196"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="244"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="296"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="324"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="359" mass="38451" checksum="68AA5F566AE31951" modified="2011-01-11" version="1">MANLLKIFTKDSFVLALVSIILGLLLGAIVMMIGGYDPIVAYSALFSRVYGDSYNFGEAIREMTPLILTGLAFAFAARAGLFNIGGEGQFLVGMTAASIVGIKLHGLPAIIHAPLAVIAGAVFGGLWAAIAGYLKAKRGVNEVITCIMMNWIGLYLANLVINQFALMEGENRSVDIQPSASISIDWLSQMMGNARVHWGTVIAVLAAVFFYIFMWKTKQGYELRAVGFNQDASRYAGMNVNRNIIKAMFISGVFAGLAGAFEVLGVFHYQSVMAGSPGTGFDGIAVSLIGMNNPFGVLLGSVLFGTLTYGSAGMSFSADVPPEIIRVVIGSIIFFIAAQGIVRWVVKPLYSKRKKEKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEQ6</accession>
    <name>E3EEQ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ytaF</name>
        <name evidence="7" type="ORF">PPSC2_08360</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370363.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20965"/>
    <dbReference type="EnsemblBacteria" id="ADO55742">
        <property type="protein sequence ID" value="ADO55742"/>
        <property type="gene ID" value="PPSC2_08360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1757"/>
    <dbReference type="eggNOG" id="COG1971">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094526_0_0_9"/>
    <dbReference type="OMA" id="VGITYGM"/>
    <dbReference type="OrthoDB" id="1993813at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003810">
        <property type="entry name" value="Mntp/YtaF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35529">
        <property type="entry name" value="PTHR35529"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02659">
        <property type="entry name" value="Mntp"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="189"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="244"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="121"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="129"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="265" mass="28141" checksum="891D34166B8E54FA" modified="2011-01-11" version="1">MANHWGALLLLAFALSLDSFGVGVTYGLRKMKIPQLSIAIISVCSGLVIGISMQLGALLSRVLSPVYTTVFGAVILICIGCYSLIQALHRKEDLTEEAAEVPGNLRLTEQVDSGNISALAEKKSAEDANTESLSSSGKGLPRETSLELQQEERTLFSLEFRKWGLVIRILRSPSAADMDRSGSISATEAVWLGIALSVDAFGAGLGAAMLGFQPLSTALAITLFSGVFLIAGMKAGFFLSAFRFMKALGVLPALLLIMMGILKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEV5</accession>
    <name>E3EEV5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pyridoxal 5'-phosphate synthase subunit PdxT</fullName>
            <ecNumber evidence="4">4.3.3.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Pdx2</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Pyridoxal 5'-phosphate synthase glutaminase subunit</fullName>
            <ecNumber evidence="4">3.5.1.2</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pdxT</name>
        <name evidence="7" type="synonym">guaA1</name>
        <name evidence="7" type="ORF">PPSC2_00455</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>aldehydo-D-ribose 5-phosphate + D-glyceraldehyde 3-phosphate + L-glutamine = H(+) + 3 H2O + L-glutamate + phosphate + pyridoxal 5'-phosphate</text>
            <dbReference type="Rhea" id="RHEA:31507"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58273"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
            <dbReference type="EC" id="4.3.3.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; pyridoxal 5'-phosphate biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">In the presence of PdxS, forms a dodecamer of heterodimers. Only shows activity in the heterodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the glutaminase PdxT/SNO family.</text>
    </comment>
    <dbReference type="EC" id="4.3.3.6" evidence="4"/>
    <dbReference type="EC" id="3.5.1.2" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368724.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13470"/>
    <dbReference type="EnsemblBacteria" id="ADO54078">
        <property type="protein sequence ID" value="ADO54078"/>
        <property type="gene ID" value="PPSC2_00455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.88"/>
    <dbReference type="eggNOG" id="COG0311">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069674_2_0_9"/>
    <dbReference type="OMA" id="VFIRAPI"/>
    <dbReference type="OrthoDB" id="1628378at2"/>
    <dbReference type="UniPathway" id="UPA00245"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004359">
        <property type="term" value="F:glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036381">
        <property type="term" value="F:pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006543">
        <property type="term" value="P:glutamine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042823">
        <property type="term" value="P:pyridoxal phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01749">
        <property type="entry name" value="GATase1_PB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="PdxT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002161">
        <property type="entry name" value="PdxT/SNO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021196">
        <property type="entry name" value="PdxT/SNO_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31559">
        <property type="entry name" value="PTHR31559"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01174">
        <property type="entry name" value="SNO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005639">
        <property type="entry name" value="Glut_amidoT_SNO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03800">
        <property type="entry name" value="PLP_synth_Pdx2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01236">
        <property type="entry name" value="PDXT_SNO_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51130">
        <property type="entry name" value="PDXT_SNO_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="L-glutamine binding" evidence="4 6">
        <location>
            <begin position="46"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="L-glutamine binding" evidence="4 6">
        <location>
            <begin position="133"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4 5">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4 5">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4 5">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 6">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01615"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR005639-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR005639-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="20594" checksum="F39BD71C75343850" modified="2011-01-11" version="1">MKIGVLSLQGAVAEHIRSVERAGAEGIAVKKIEQLDELSGLIIPGGESTTIGKLMRKYDFIEAIRQFSNQGKPVFGTCAGLIVLAKTIQGQEEAHLGLMDITVSRNAFGRQRESFETDLNIKGIEEPVRAVFIRAPLIQSVGMGVDVLSEYNGEIVAARQGHLLASSFHPELTDDFRLHQYFVDMVRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEZ3</accession>
    <name>E3EEZ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-274</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-274</name>
        <name evidence="1" type="ORF">PPSC2_00635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54116.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13625"/>
    <dbReference type="EnsemblBacteria" id="ADO54116">
        <property type="protein sequence ID" value="ADO54116"/>
        <property type="gene ID" value="PPSC2_00635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.125"/>
    <dbReference type="eggNOG" id="COG4506">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120388_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012674">
        <property type="entry name" value="Calycin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015231">
        <property type="entry name" value="DUF1934"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09148">
        <property type="entry name" value="DUF1934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50814">
        <property type="entry name" value="SSF50814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54116.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16253" checksum="92AAC4EAFD1422AB" modified="2015-05-27" version="2">MPHNAKVRIRLHSHHDGEDVVQELPGEAIVRGKHLYIRYEEPQESPEGGTTRNTVKIGPDELKLIRHGEVQSEQSFALGRRLPGFYRSPYLNLNMSAHTQKLDIRMDGFTGHVSWTYDLYVFEDFSGHFAISLHIQEEQQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF76</accession>
    <name>E3EF76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-746</name>
        <name evidence="2" type="ORF">PPSC2_03145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369234.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15955"/>
    <dbReference type="EnsemblBacteria" id="ADO54596">
        <property type="protein sequence ID" value="ADO54596"/>
        <property type="gene ID" value="PPSC2_03145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.602"/>
    <dbReference type="eggNOG" id="COG4818">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_095018_3_0_9"/>
    <dbReference type="OMA" id="FVKFHAM"/>
    <dbReference type="OrthoDB" id="2012653at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12351" checksum="6B9BE24891F2B3A9" modified="2011-01-11" version="1">MSVYKSSTGLDENIAAVLCYLFAFIGALAFVMLEKKSRFVLFHALQSILLFVALMIGHVLVGFIPILGPFLASLLTLASLALWIILLIRAGQGKWLKLPWIGDLALHQARQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF97</accession>
    <name>E3EF97_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Alanine dehydrogenase</fullName>
            <ecNumber evidence="3 6">1.4.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ald</name>
        <name evidence="12" type="ORF">PPSC2_05270</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>H2O + L-alanine + NAD(+) = H(+) + NADH + NH4(+) + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:18405"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="EC" id="1.4.1.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid degradation; L-alanine degradation via dehydrogenase pathway; NH(3) and pyruvate from L-alanine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the AlaDH/PNT family.</text>
    </comment>
    <dbReference type="EC" id="1.4.1.1" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369693.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18185"/>
    <dbReference type="EnsemblBacteria" id="ADO55060">
        <property type="protein sequence ID" value="ADO55060"/>
        <property type="gene ID" value="PPSC2_05270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1068"/>
    <dbReference type="eggNOG" id="COG0686">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003376_3_0_9"/>
    <dbReference type="OMA" id="HITTHDQ"/>
    <dbReference type="OrthoDB" id="673280at2"/>
    <dbReference type="UniPathway" id="UPA00527">
        <property type="reaction ID" value="UER00585"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000286">
        <property type="term" value="F:alanine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042853">
        <property type="term" value="P:L-alanine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd05305">
        <property type="entry name" value="L-AlaDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008141">
        <property type="entry name" value="Ala_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008143">
        <property type="entry name" value="Ala_DH/PNT_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007886">
        <property type="entry name" value="AlaDH/PNT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007698">
        <property type="entry name" value="AlaDH/PNT_NAD(H)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42795">
        <property type="entry name" value="PTHR42795"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01262">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05222">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000183">
        <property type="entry name" value="Alanine_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01002">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01003">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00518">
        <property type="entry name" value="alaDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00837">
        <property type="entry name" value="ALADH_PNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 9" id="KW-0520">NAD</keyword>
    <keyword evidence="9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AlaDh_PNT_N" evidence="11">
        <location>
            <begin position="4"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="AlaDh_PNT_C" evidence="10">
        <location>
            <begin position="148"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="133"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="197"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="219"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="238"/>
            <end position="239"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="266"/>
            <end position="269"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="298"/>
            <end position="301"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000183-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000183-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000183-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="376" mass="39553" checksum="201163319A338537" modified="2011-01-11" version="1">MRIGVPKEIKNNENRVALTPAGAAQMIQHGHQVFVESHAGVESGFTDGDYATAGATLVQQAADVWSQADLIIKVKEPLPSEYGYFRPGLILFTYLHLAAEPALARALTDNGVAAISYETLDVEGSLPLLTPMSEVAGRMAVQIGAQLLEKPKGGKGILLAGVPGVKRGKVTIIGGGVVGTNAAKVAIGLGADVTLIDLSLPRLRQLDDIFGNQLHTLVSTPSNIAEAVAQSDLLIGAVLITGAKAPRLVTEAMVQTMQPGSVIVDVAIDQGGIVETIDHITTHDQPTYVKHGVIHYAVANMPGAVPQTSTLALTNATLPFALQLADLGVQEALRRSKPLLSGANVLNGHITYEAVARDLGYPYVPVEQAWQTKTLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFI6</accession>
    <name>E3EFI6_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Coat protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_07180</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20160"/>
    <dbReference type="EnsemblBacteria" id="ADO55477">
        <property type="protein sequence ID" value="ADO55477"/>
        <property type="gene ID" value="PPSC2_07180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1483"/>
    <dbReference type="eggNOG" id="COG5577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1925502_0_0_9"/>
    <dbReference type="OMA" id="TTESNCP"/>
    <dbReference type="OrthoDB" id="1909926at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012851">
        <property type="entry name" value="Spore_coat_CotF-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07875">
        <property type="entry name" value="Coat_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0946">Virion</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="106"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="128" mass="14892" checksum="5A3FBE0B9070FB46" modified="2011-01-11" version="1">MYSQNNMSFMPEEDLLYTILADMKRTVREYTTATTESNCPSVRQMFTDLTNDTLRLQGDLYHLMSQNNMYSAPTKALRIDLDKQIQEARKTQQECQQFIQQKSSSAGVYGQPMHQQGQSTHQSNPYYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFP1</accession>
    <name>E3EFP1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0229 protein PPSC2_07440</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yhbH</name>
        <name evidence="3" type="ORF">PPSC2_07440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0229 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20415"/>
    <dbReference type="EnsemblBacteria" id="ADO55533">
        <property type="protein sequence ID" value="ADO55533"/>
        <property type="gene ID" value="PPSC2_07440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1538"/>
    <dbReference type="eggNOG" id="COG2718">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049702_2_0_9"/>
    <dbReference type="OMA" id="QYFAYIE"/>
    <dbReference type="OrthoDB" id="481720at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01232">
        <property type="entry name" value="UPF0229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014230">
        <property type="entry name" value="Spore_YhbH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006698">
        <property type="entry name" value="UPF0229"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30510">
        <property type="entry name" value="PTHR30510"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04285">
        <property type="entry name" value="DUF444"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02877">
        <property type="entry name" value="spore_yhbH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="81"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="102"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="388" mass="45263" checksum="2421623AE9E5CB00" modified="2011-01-11" version="1">MTEPRQPYSFVVSREDWSLHRKGYQDQQRHQQKVKDVIKQNLPDLITEENIIMSDGQQIIKVPIRSLDEYRFIYNYQKQKHVGQGDGDSQVGDVIGRDPASQKPGKGEKAGDQPGHDIMETEVSIEELEDMLFEEMELPHLQQKDKDQIEVESIVFNDIRKKGMQANIDKKRTILENLRRNAREGNPGIHHISPDDLRYKTWEEKTIPQSNAVIIAMMDTSGSMGSFEKYCARSFFFWMTRFLRRQYEKVEIVFLAHHTEAKEVTEEEFFTRGESGGTICSSAYLKALEIIDKRYPPSTYNIYPFHFSDGDNLSSDNERCVKLIEELMKRSNMFGYGEVNQYNRSSTLMSAYKNIKTDQFMYYVIKEKGEVYQALRTFFRKREGGTVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFQ1</accession>
    <name>E3EFQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370392.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1801"/>
    <dbReference type="EnsemblBacteria" id="ADO55773">
        <property type="protein sequence ID" value="ADO55773"/>
        <property type="gene ID" value="PPSC2_08520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1790"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008901_0_0_9"/>
    <dbReference type="OrthoDB" id="983098at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="138"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="43238" checksum="B03CEFEBCEF40DB8" modified="2011-01-11" version="1">MRKYKKINDNGRQYRCYVCKESNIVAHEHYVKLCQSCGEYNEKKRLAKHHLESYIALITGGRTKIGYHTALRLLRDGSRVILTTRFPYDALQRYIQEPDFENWKDRIHIYELDFRQIERVEMFACFIDKEFPYMDIIINNAAQTVRMSQEEYKELTLNEVELQKQIMDNQRLLANSTTISYFDKSTNETKDIQNLQLFNQEMGVVSHNHSFQNSWTAQSHQISMVEMLEVQLINVTAPFLLNTKLKDTMMRSPNQNRFIVNVSAAEGRFQMKRKGGYHVHTNMAKASLNMMTLTLSKEYKKHRIFVTSVDPGWVSNQFPEQVKASREINLPLDFNDAAARICDPIYEGKDAERPLTGVFLKDYKQVDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFQ5</accession>
    <name>E3EFQ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370396.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1805"/>
    <dbReference type="EnsemblBacteria" id="ADO55777">
        <property type="protein sequence ID" value="ADO55777"/>
        <property type="gene ID" value="PPSC2_08535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1794"/>
    <dbReference type="eggNOG" id="COG5362">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2509585_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="12252" checksum="4656C64CCE8D0ADA" modified="2011-01-11" version="1">MYVMDGKIYKLLPDDLFQVSIEKLKLYPVDKLGFEVNQAQSYMKQKFEEELWKVKIHTPVESVHSNEQKHKRIISLEPEVRKGRILFNADNLRYNHQVKDYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFR3</accession>
    <name>E3EFR3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-339</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-339</name>
        <name evidence="1" type="ORF">PPSC2_08570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1813"/>
    <dbReference type="EnsemblBacteria" id="ADO55785">
        <property type="protein sequence ID" value="ADO55785"/>
        <property type="gene ID" value="PPSC2_08570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1802"/>
    <dbReference type="HOGENOM" id="CLU_2495001_0_0_9"/>
    <dbReference type="OrthoDB" id="1880900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9997" checksum="9A3F2A6A7494D7E3" modified="2011-01-11" version="1">MSLLSAGIGYESLSFYGSFQPQHIEKLQITRAINDHAYLHISGVLSEEQEAACIGQDMEQEPYTVYEAYIHLNWRLLPIRIRWISR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFS6</accession>
    <name>E3EFS6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ribonuclease R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370417.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1826"/>
    <dbReference type="EnsemblBacteria" id="ADO55798">
        <property type="protein sequence ID" value="ADO55798"/>
        <property type="gene ID" value="PPSC2_08615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1814"/>
    <dbReference type="eggNOG" id="COG5362">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_124881_0_0_9"/>
    <dbReference type="OrthoDB" id="426360at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16099" checksum="6EBE96C291564814" modified="2011-01-11" version="1">MLANRGLITAFRLPREHGKSTISFFLFPLYATLYDKSQFTLIISATEQIALPFLDMIKDELETNQMLIEDFGIRKGGLNSCIMISGIDGNLRGIHYKHHRPTLVLMDNLLKEDTTRSEAKREQIKNTFTDVILLIGTGISIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT0</accession>
    <name>E3EFT0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370421.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1830"/>
    <dbReference type="EnsemblBacteria" id="ADO55802">
        <property type="protein sequence ID" value="ADO55802"/>
        <property type="gene ID" value="PPSC2_08640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1819"/>
    <dbReference type="HOGENOM" id="CLU_198303_0_0_9"/>
    <dbReference type="OrthoDB" id="2069023at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="9002" checksum="F0650430D6FF2E39" modified="2011-01-11" version="1">MKNGLKWTLWIVLLLILGGIVLNFYLNYFTFAYALMGVLLLVFSGWGAVAKLNNGVHEYKDQMRRNSNKEDIERYTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFU1</accession>
    <name>E3EFU1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370432.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55813">
        <property type="protein sequence ID" value="ADO55813"/>
        <property type="gene ID" value="PPSC2_08695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1831"/>
    <dbReference type="eggNOG" id="ENOG50306Z5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1609212_0_0_9"/>
    <dbReference type="OMA" id="GVWEAYD"/>
    <dbReference type="OrthoDB" id="1794552at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168916" evidence="1">
        <location>
            <begin position="25"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18566" checksum="BBB7F615C4A35DA6" modified="2011-01-11" version="1">MKKMLLASLGLTLMLSTTTGIAVAEETNPTANNQLIAVPTLTGNEQEPNGTFEQANPFFVGDSIIGTLGKEGVPGVWEAYDVFKFKAYESQKVHFTIQGDRYSDSWLQMTVYNSNHHKLSRSRDDQYFLDVEFEKGKEYYLVVEAPGLEPYTGRAFFYKVSTEPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG23</accession>
    <name>E3EG23_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-dependent protease ATPase subunit HslU</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Unfoldase HslU</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">hslU</name>
        <name evidence="8" type="ORF">PPSC2_09835</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the ClpX chaperone family. HslU subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370670.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22305"/>
    <dbReference type="EnsemblBacteria" id="ADO56056">
        <property type="protein sequence ID" value="ADO56056"/>
        <property type="gene ID" value="PPSC2_09835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2073"/>
    <dbReference type="eggNOG" id="COG1220">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033123_0_0_9"/>
    <dbReference type="OMA" id="KYGMIKT"/>
    <dbReference type="OrthoDB" id="718259at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009376">
        <property type="term" value="C:HslUV protease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036402">
        <property type="term" value="F:proteasome-activating activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043335">
        <property type="term" value="P:protein unfolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00249">
        <property type="entry name" value="HslU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004491">
        <property type="entry name" value="HslU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48102:SF3">
        <property type="entry name" value="PTHR48102:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00390">
        <property type="entry name" value="hslU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="6">
        <location>
            <begin position="51"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="domain" description="ClpB_D2-small" evidence="7">
        <location>
            <begin position="358"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="62"/>
            <end position="67"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="344"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="416"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="52509" checksum="AE0BFE3AFD30041F" modified="2011-01-11" version="1">MNNQSLTPRQVVSELDKYIVGQKEAKKSVAVALRNRYRRSKLPDDIRDEIVPKNILMIGPTGVGKTEIARRLARLVGAPFVKVEATKFTEVGYVGRDVESMVRDLMETSIRIVKSERTENVKDKAEDMANERIVNILVPAEKSNKSQRNPFEMLFGNNTGTSVEEEPPQQDGTLAEKRRKAKFDLLSGKLEDDVIEIDVEDTAPNMLDMFAGQGNEQMGMNMQEMFGSFLPKRTKKRKLPIKEARKVLIQDEAAKLIDMDDVIQESVKRAEQSGIIFIDEIDKIASQGKGSGPDVSREGVQRDILPIVEGSTIMTKYGPVRTDYILFIAAGAFHVAKPSDLIPELQGRFPIRVELSSLTLDEFVSILTEPKNALTKQYTELLRTEEIEVEFSAEAIREIASIAESVNRNTENIGARRLHTILEKLLEDLSFEAPELTLDRMIITPEYVREKLGDIAQNRDLSQYIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG61</accession>
    <name>E3EG61_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Acetolactate synthase</fullName>
            <ecNumber evidence="7">2.2.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">alsS</name>
        <name evidence="7" type="ORF">PPSC2_10720</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56254.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599693.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23115"/>
    <dbReference type="EnsemblBacteria" id="ADO56254">
        <property type="protein sequence ID" value="ADO56254"/>
        <property type="gene ID" value="PPSC2_10720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2270"/>
    <dbReference type="eggNOG" id="COG0028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013748_3_2_9"/>
    <dbReference type="OrthoDB" id="391134at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034077">
        <property type="term" value="P:butanediol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012782">
        <property type="entry name" value="Acetolactate_synth_catblc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02418">
        <property type="entry name" value="acolac_catab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="6">
        <location>
            <begin position="17"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="4">
        <location>
            <begin position="202"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="5">
        <location>
            <begin position="398"/>
            <end position="544"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56254.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="564" mass="61226" checksum="2D8D0F4EE5017D03" modified="2015-05-27" version="2">MSTKVQAVETKTISDTKGADLVVDCLIKQGVTHIFGIPGAKIDSVFDVLQDRGPELIVCRHEQNAAFMAAAVGRLTGKPGVCIVTSGPGASNLATGLVTANAESDPVVAIAGAVPRSERLKRTHQSMDNAGLFEPITKYSVEVEHPDNVPEAIANAFRIATSAQPGATFVSLPQDVLTSSSEVTAIEKVSLPQLGTAPAALIKQVADQIRKAKLPVLLLGMKASTPEATAAIRALIRDTDLPVVETFQAAGAISRELEDHYFGRVGLFQNQPGDMLLGAADLVLTIGYDPIEYDPKNWNIPANRTLIHLDDHQADIDHDYQPDYELIGNIGLIVSGLAEELPTLKLPKSSCDQLNRLRHDLNEQAAVPAHKHDFLIHPLQFIRTLRSLIDDNVTVTCDVGSHYIWMARYFRSYEPRRLLFSNGMQTLGVALPWGIAATLVNPGQKVVSISGDGGFLFSSMELETAVRLNSPLVHIVWRDGTYDMVAFQQQIKYGRTSGVKFGDVDVVKYAESFGATGLRVHSPEELESVLQQALLTDGPVVVDIPIDYQDNVQLGRKLLPNQLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGI4</accession>
    <name>E3EGI4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YdeM1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydeM1</name>
        <name evidence="2" type="ORF">PPSC2_03270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369260.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0640"/>
    <dbReference type="EnsemblBacteria" id="ADO54623">
        <property type="protein sequence ID" value="ADO54623"/>
        <property type="gene ID" value="PPSC2_03270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.631"/>
    <dbReference type="eggNOG" id="COG2030">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094876_1_1_9"/>
    <dbReference type="OMA" id="ISSGWMT"/>
    <dbReference type="OrthoDB" id="1563802at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="8"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16055" checksum="5A0E12C3926C4698" modified="2011-01-11" version="1">MKFNEFFVGQRFETDSIKVTKEKIIEFASEFDPQYMHLDEKKTQEGIFGGIIASGIQTLALTFKLWVECGLYGEDVVAGTAMDNIRFMKPVYPDDELHVVVEVINLEDNRKNTGIVTVNLSTFNHTTQKIFEGDLSVIIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGP4</accession>
    <name>E3EGP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydbI</name>
        <name evidence="7" type="ORF">PPSC2_03540</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369319.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16340"/>
    <dbReference type="EnsemblBacteria" id="ADO54683">
        <property type="protein sequence ID" value="ADO54683"/>
        <property type="gene ID" value="PPSC2_03540"/>
    </dbReference>
    <dbReference type="GeneID" id="66574265"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.693"/>
    <dbReference type="eggNOG" id="COG0628">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053149_0_0_9"/>
    <dbReference type="OMA" id="KFFQHPG"/>
    <dbReference type="OrthoDB" id="944044at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="196"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="223"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="292"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="38009" checksum="1ADE43C90BC5C535" modified="2011-01-11" version="1">MVRNWMNHAGVRRAAVLAIIVLLLFMLRSMMNIILLTLLLTILIGSIYNGVNKLIKRFANVPPMIVLLLVYGLLILIIVWGVYRMVPLISVQVKQVYLMIQQAYMYPDRNQWNETIIEFMDTLNVQRLFEPGWNAVMKISQLGTQLLVSIILSLFFLMEKSYITRFTATFVDSKLGWFFKEVGHFGRMFLGTFGKVLEAQLLISLINCILTTTALWIMGFPNLLGLALIIFLLGLVPVAGVFISLIPLGLIAFSVGGINYVIYLVILIVVIHAIEAYFLNPKLMSSKTNLPIFFTFVVLIFSEHLIGVWGLIVGIPLFVFFLDLIGVQRKQEKDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGP9</accession>
    <name>E3EGP9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Exonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_05600</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369766.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18505"/>
    <dbReference type="EnsemblBacteria" id="ADO55133">
        <property type="protein sequence ID" value="ADO55133"/>
        <property type="gene ID" value="PPSC2_05600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1139"/>
    <dbReference type="eggNOG" id="COG5018">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037266_3_3_9"/>
    <dbReference type="OMA" id="QYIIYDL"/>
    <dbReference type="OrthoDB" id="1985371at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exonuclease" evidence="2">
        <location>
            <begin position="2"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="194"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="223" mass="25500" checksum="4F196E9BA9B8D7A4" modified="2011-01-11" version="1">MQYIIYDLEFTVSRNARYSSEIIDIGAVKVIHGEDGLFVADTFHSFVRPSNRPVISTDTVQFTGITQRDIDAAPLFPEAVKQFIAWLGTDSTYYLCAWGPDDRQKLVSHCRTHHVDLGWIHNTNDIQKQISRLFSSNGKYRQLSLSQALELCNIEFDGQQHRALDDAVNTAQVFMHHFDRLTLVHNAADDEESRGSKLVYSSPEEEQEQYSPFGNLANLFKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGW4</accession>
    <name>E3EGW4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369830.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1218"/>
    <dbReference type="EnsemblBacteria" id="ADO55198">
        <property type="protein sequence ID" value="ADO55198"/>
        <property type="gene ID" value="PPSC2_05880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1204"/>
    <dbReference type="eggNOG" id="ENOG5030R4D">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_3082671_0_0_9"/>
    <dbReference type="OMA" id="QCGITTP"/>
    <dbReference type="OrthoDB" id="2048629at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="6762" checksum="48EA55CB6B8B81DF" modified="2011-01-11" version="1">MNKETELGGNGPLLRDNARKAGKAAIHLDIRNILLQCGITTPEWLEGDADRTKYRKDKRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH43</accession>
    <name>E3EH43_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370230.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1626"/>
    <dbReference type="EnsemblBacteria" id="ADO55603">
        <property type="protein sequence ID" value="ADO55603"/>
        <property type="gene ID" value="PPSC2_07750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1610"/>
    <dbReference type="HOGENOM" id="CLU_1480657_0_0_9"/>
    <dbReference type="OrthoDB" id="748700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024131">
        <property type="entry name" value="UPF0489"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12640">
        <property type="entry name" value="UPF0489"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="21480" checksum="E066579312441E63" modified="2011-01-11" version="1">MNNEWENDVNWKVHTDNKKVYIMRDHNWAFAAWELAKLDERIKGQSLVVHVDAHLDDVPDGVLVKNLLEAKTESEILSLSKGHDYTTGSLSSESYLMRIDNFIWASLARKTIEEVIYVSRYRDDIFKLEELREEETQLSKLIRSKLPINFNYKHQRFREIDDFLHAFDQDSFSKKSVTDLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHF4</accession>
    <name>E3EHF4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">DNA polymerase III PolC-type</fullName>
            <shortName evidence="11">PolIII</shortName>
            <ecNumber evidence="11">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">polC</name>
        <name evidence="15" type="synonym">polC3</name>
        <name evidence="15" type="ORF">PPSC2_10075</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 11">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the DNA polymerase type-C family. PolC subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370717.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22545"/>
    <dbReference type="EnsemblBacteria" id="ADO56107">
        <property type="protein sequence ID" value="ADO56107"/>
        <property type="gene ID" value="PPSC2_10075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2123"/>
    <dbReference type="eggNOG" id="COG2176">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003297_2_0_9"/>
    <dbReference type="OMA" id="YYAAYFT"/>
    <dbReference type="OrthoDB" id="561611at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.700">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00356">
        <property type="entry name" value="DNApol_PolC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011708">
        <property type="entry name" value="DNA_pol3_alpha_NTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040982">
        <property type="entry name" value="DNA_pol3_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024754">
        <property type="entry name" value="DNA_PolC-like_N_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028112">
        <property type="entry name" value="DNA_PolC-type_N_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029460">
        <property type="entry name" value="DNAPol_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006054">
        <property type="entry name" value="DnaQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004013">
        <property type="entry name" value="PHP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003141">
        <property type="entry name" value="Pol/His_phosphatase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006308">
        <property type="entry name" value="PolC_gram_pos"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044923">
        <property type="entry name" value="PolC_middle_finger_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14480">
        <property type="entry name" value="DNA_pol3_a_NI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11490">
        <property type="entry name" value="DNA_pol3_a_NII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07733">
        <property type="entry name" value="DNA_pol3_alpha"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17657">
        <property type="entry name" value="DNA_pol3_finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14579">
        <property type="entry name" value="HHH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02811">
        <property type="entry name" value="PHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00481">
        <property type="entry name" value="POLIIIAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00573">
        <property type="entry name" value="dnaq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01405">
        <property type="entry name" value="polC_Gram_pos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9 11" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="8 11" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 11" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4 11 15" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="POLIIIAc" evidence="14">
        <location>
            <begin position="335"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="domain" description="Exonuclease" evidence="13">
        <location>
            <begin position="420"/>
            <end position="586"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="169"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO56107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1438" mass="162205" checksum="7B64FA504128B8F9" modified="2011-01-11" version="1">MGGAEEKRKRLELLMKQVVMPAGVVDPYFLDGWIDQVEISRTNKDWNITIAKETLVPAQVYRTFCIQVQEKMSHIAKITFRFQYSEQVQPGDIIGEYWKLFLEWVHREIPSVNGWMNRAVHEWEDGLLLLTMSDSMSLELARKKQIDQAIIKFYDKYFGISMRIKVQVGESNQEALQEFQEKKMQEEREVIQQMMESMESEMPPLEEEEGDVRLQFGYDIKEPAIPMQEIQDEEKKVTLQGTIFGLDSKELRNGSTLFTYYLTDFSDSLQMKMFAKTKEDLKILSLLANGKWVKVRGRVEYDRFMQIPELVMIPSDLVEVQAPPGRKDNAAEKRVEFHLHTKMSAMDAVASIDQYVKTAAKWGHKAIAVTDHGGVQCYPDAAKAAKKNGIKMIYGVEANVVNDAVEVVMQAQPLNLKTATYVVFDIETTGLSVTQNKIIEIAAVKMHEGKEIDRYATFVNPHERIPYNIQQLTNINDEMVKDAPDVEPVMKEFVAFAGDAVLVAHNARFDIGFIQATLRKMGLPEMTNPVLDTLELARLLFPTMKNHRLNTLTSKYKVALESHHRAIDDTVALTEVLNGLLNDAEQIKGLKMLDRLNDYVGKDLSTVRPFHCCIYALNPVGKKNLYKLVSMSHTEYFKRVPCIPKSKLSEMRDGLLIISGCEKGEFFEAVLNKSEEEAEEIAQFYDVLEIQPLTMYMHLVEKQLVSGPDALKTAIRKVCDIGKRLDKPVIATGNVHYLETRDKLYRDITIHGITGFSPLKDIRKPDAHLRTTDEMLAEFEFLGEEKAYEVVVKNTSELAERFEELELFPDKLFTPLLDGADEEIRNTCYETARSIYGESLPEVVVARLEKELEPIIKYGFSANYLISERLVKKSNQDGYLVGSRGSVGSSVVATFLGISEVNPLPAHYICGNSECRHSEWFLDGSVPSGFDLPDKNCPNCGGKLKGEGQDIPFETFLGFKGDKVPDIDLNFSGEYQPVAHNYTKVLFGEKSVFRAGTIGTVAEKTAFGFAKKYEEAHHKKWRGAELNRLASGCTGVKRSTGQHPGGIVVVPDYIEVEDITPVQYPADDTSSEWKTTHFDYHAFDANLLKLDILGHDDPTMMRMLQDLTGVDPTTIPMNDPKVMSMFNSTEALGVTPQQIRTPVATYGVPEMGTKFVRQMLVESQPSSFADLLQISGLSHGTGVWLGNAQELIKNNTCNIKTVIGCRDDIMLFLIYKAGMDAGLAFKITESVRKGKGLSAEWIEEMKKCKVPQWYIDSCLKIQYMFPKAHAAAYVISAVRTAYFKLYHPIEYYATYFSVRAADFDIDLCCQGYDAIARKIVEIEQLGFQAPPKEKGMLPILEMALEMTARGFSFKSIDLYRSEATRFKVDGDSLIPPFGALQGIGDNAARNIAAAREQGEFLSVEDFQQKSKASKTIVEMLSQMGCFRGLPESNQLSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHL8</accession>
    <name>E3EHL8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cobalamin biosynthesis protein CobW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yciC</name>
        <name evidence="3" type="ORF">PPSC2_10845</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. CobW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370886.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23260"/>
    <dbReference type="EnsemblBacteria" id="ADO56280">
        <property type="protein sequence ID" value="ADO56280"/>
        <property type="gene ID" value="PPSC2_10845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2297"/>
    <dbReference type="eggNOG" id="COG0523">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017452_2_0_9"/>
    <dbReference type="OMA" id="WSQAGPN"/>
    <dbReference type="OrthoDB" id="1267701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036627">
        <property type="entry name" value="CobW-likC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00833">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobW C-terminal" evidence="2">
        <location>
            <begin position="259"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="398" mass="44621" checksum="2A1C64BB403F2553" modified="2011-01-11" version="1">MNKKPIPVTVLSGYLGAGKTTILNHVLNNRDGMKVAVIVNDMSEVNIDAELVKKEGGLSRTEEKLVELSNGCICCTLREDLLLEVKKLAEQGEFDYILIESTGISEPVPIAQTFTYADEGTGINLASLAKLDCMVTVVDANRFWHDFESGETLLDRKQATGEDDTRDISDLLIDQIETCDVLILNKCDLVQPAELDKLEGVLRRLQPEARIIRTSKGKVAPSDILNTGLFNFDKASQSAGWIRELELESHTPETDEYGINSFVYRRRRPFHPARLAEFTSYWPEEIVRAKGLVWIAAPQDWAASISQAGPSIQFGPAGSWLAALPEEERQEIIAANPEVLDHWEEQWGDRMNEIVMIGIGMNRLNLEEELDECLLNDSEMDMDWSSFENPLPWPTGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI24</accession>
    <name>E3EI24_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaS2</name>
        <name evidence="5" type="ORF">PPSC2_03585</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369328.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16395"/>
    <dbReference type="EnsemblBacteria" id="ADO54692">
        <property type="protein sequence ID" value="ADO54692"/>
        <property type="gene ID" value="PPSC2_03585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.702"/>
    <dbReference type="eggNOG" id="COG0662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="EESHIGF"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="187"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="304" mass="34951" checksum="AE8266019AC182EA" modified="2011-01-11" version="1">MILNPDVDPALFHDCQWLPIIDWNVKFFGAHIHRVKADWCMPEESHIGFEIALILEGRQETIMENNVYSVGKGDILMIPPGFKHVTQCVSPDGMYYFSTHFNVDDPLFRQEMIKNNQLFFPAGTETNTKLQKVVHSWISMVRENGEYTTADRFRMQIALFELFGIFSQMISTGLEPRIAPSSVQYAKAIMEAIQSRFKPYRGDESGEQTFRLEDVAASLGISPGYAQEVFRKVYGYSPRHYLSETKLHEAKVLIQQPNLPLNKVASLLGYSSLAHFSRQFKRWTGTSPLKYRQTLKPITDEQRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI34</accession>
    <name>E3EI34_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">BTB/POZ domain-containing protein KCTD9</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yisX</name>
        <name evidence="1" type="ORF">PPSC2_03635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369338.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54702">
        <property type="protein sequence ID" value="ADO54702"/>
        <property type="gene ID" value="PPSC2_03635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.712"/>
    <dbReference type="eggNOG" id="COG1357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033401_5_0_9"/>
    <dbReference type="OMA" id="ADFFDCK"/>
    <dbReference type="OrthoDB" id="1677662at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13599">
        <property type="entry name" value="Pentapeptide_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="23888" checksum="4DDE124B8A035ADA" modified="2011-01-11" version="1">MKNKMESPKIPADLPILNEEIRSIRSKDELSVGAVEEIMLDNIEAVKVSLEKMTFKNVTITESSLPESEWTDVIFDKCDLSNVNFSGSFIHRAEFRNCKLLGTDFSRSRFQNVRFLDCLGDYSMFRFANFKQVGFEDCSLISTDFYHLTLQKTSFARCNLDQAILSGSKLKGVDLSDCEFDGIQVEIEDLNGCIISPHQASSFVGLLGLVIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI84</accession>
    <name>E3EI84_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YphP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yphP</name>
        <name evidence="1" type="ORF">PPSC2_03850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369388.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16665"/>
    <dbReference type="EnsemblBacteria" id="ADO54752">
        <property type="protein sequence ID" value="ADO54752"/>
        <property type="gene ID" value="PPSC2_03850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.762"/>
    <dbReference type="eggNOG" id="ENOG502ZBVN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_132521_0_0_9"/>
    <dbReference type="OMA" id="CAAGQCR"/>
    <dbReference type="OrthoDB" id="1905527at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009474">
        <property type="entry name" value="YphP/YqiW"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40052">
        <property type="entry name" value="PTHR40052"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06491">
        <property type="entry name" value="Disulph_isomer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04191">
        <property type="entry name" value="YphP_YqiW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="15932" checksum="FB7DEE44D3EA0673" modified="2011-01-11" version="1">MSMSFDQYMRDSVQPMRDELTNLGIQELRTSEDVEAKLPDAKGTVLVVVNSVCGCAAGQCRPGIAEALKHDITPDHLYTVFAGQDKEATAKAREFFAPYPPSSPSIALLKDGELVHFIERHQIEDRSADQIAADLTSAFDRFCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIF0</accession>
    <name>E3EIF0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Actin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_06170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369894.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55263">
        <property type="protein sequence ID" value="ADO55263"/>
        <property type="gene ID" value="PPSC2_06170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1271"/>
    <dbReference type="eggNOG" id="ENOG50304XS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1208845_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168465" evidence="2">
        <location>
            <begin position="16"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="25002" checksum="9FA9CC128BC6CE0C" modified="2011-01-11" version="1">MSASLLLSVAPVSFASEVPSVSFSSQDLDKISEHLNDLGLSKEVQQSLIEKMKAGELPDSDNPEKRGTGITSEVESPDGLKIQRTTFPDGSVIQSTIDLTNAKIKEEHVITPNDVSGGYASGGSGYRTFTNATVREETSYVKARFFADYTLVQGGYSYISDAYDPYIDIMAGYSSGENLVVDQPKQTDSRPARATLSFTWVKVNGYFSSTYKLFLYVNNSSATSQLQTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIV8</accession>
    <name>E3EIV8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Conjugal transfer protein TraX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">traX</name>
        <name evidence="2" type="ORF">PPSC2_09460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370594.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21930"/>
    <dbReference type="EnsemblBacteria" id="ADO55977">
        <property type="protein sequence ID" value="ADO55977"/>
        <property type="gene ID" value="PPSC2_09460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1995"/>
    <dbReference type="eggNOG" id="ENOG5031QMC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074054_0_0_9"/>
    <dbReference type="OMA" id="IVEGFFH"/>
    <dbReference type="OrthoDB" id="1258260at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008875">
        <property type="entry name" value="TraX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05857">
        <property type="entry name" value="TraX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="206" mass="23957" checksum="A889E56B9EDD24CE" modified="2011-01-11" version="1">MYWLAMLTMLIDHVGLVFFPTDPAWRIAGRLAFPIYAYALYMGYTRTRNMRSYMLRLLGLALISQVPYMLAFDVHRPNVIWTLLTSLLALAAASRMKHWVAVTGLYVLTALFMELSQMDYGAYGLLLVLIYRYTRSYMMIAAHFVLNVVYDMVHHANIQHFSLLSSILIVCFATGESGFYRRVPRWLWRSFYPAHLAVIALIRIWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIX5</accession>
    <name>E3EIX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydhO1</name>
        <name evidence="5" type="ORF">PPSC2_09545</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370611.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22015"/>
    <dbReference type="EnsemblBacteria" id="ADO55994">
        <property type="protein sequence ID" value="ADO55994"/>
        <property type="gene ID" value="PPSC2_09545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2012"/>
    <dbReference type="eggNOG" id="COG0103">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0791">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_747707_0_0_9"/>
    <dbReference type="OMA" id="HVIREVN"/>
    <dbReference type="OrthoDB" id="682655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000064">
        <property type="entry name" value="NLP_P60_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003646">
        <property type="entry name" value="SH3-like_bac-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00877">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08239">
        <property type="entry name" value="SH3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00287">
        <property type="entry name" value="SH3b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51935">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51781">
        <property type="entry name" value="SH3B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168472" evidence="2">
        <location>
            <begin position="25"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="domain" description="SH3b" evidence="3">
        <location>
            <begin position="145"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="NlpC/P60" evidence="4">
        <location>
            <begin position="220"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="344" mass="38107" checksum="AE8B6BBC4A9CEFE9" modified="2011-01-11" version="1">MRINKKVWLALLAVPLLQATPSYAKPAPLTPVTTVYVDDRPLELTAQPLLLDGTTLVPMRQLFEAQGAVLSWNGSSKTVTATKNDTTLTYRIGEVTSTLNGKTLSLNVPGQIVEGNTMIPLRFVSEALGSTVKWDGLTRTIRIASTDDFFTTVLYGVNLRSKPDSSETSPSLRLIPTGEKVHVIREVNALWLEVRTKNNLTGYISAKPKYSDYTSTSLAERQGDELIAYGQKYLGTPYEFGAATGQTSTFDCSSFVGEVFRHTLSVDLPRVSYDQAKEGQEIGLNELRKGDLLFFSARGLEIGHVAIYAGNNKLLHTFSKERGVHFDTFDGKWKKRFVTARRVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ01</accession>
    <name>E3EJ01_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">VWFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370788.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22885"/>
    <dbReference type="EnsemblBacteria" id="ADO56182">
        <property type="protein sequence ID" value="ADO56182"/>
        <property type="gene ID" value="PPSC2_10420"/>
    </dbReference>
    <dbReference type="GeneID" id="66577831"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2196"/>
    <dbReference type="eggNOG" id="COG2304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1109751_0_0_9"/>
    <dbReference type="OMA" id="PAPLVCH"/>
    <dbReference type="OrthoDB" id="542317at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="1">
        <location>
            <begin position="14"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="250" mass="27837" checksum="22A8F96B1C75B187" modified="2011-01-11" version="1">MNYTIQASQRTPALIIYLIDISASMNMLMEGRRRIDVVYEAISLAIRQMVFRSTKGNRLTARYRIAILAYSDDVYDLLNGVKGIDEIAAIGSLPDLTPKRFSDSAKAFLQAERILQAELPGMQDCPAPLVCHMTDGVSTGDDPEPIAKRIMNMSVPDGNVLVENIFLSDRLLETPIQDPRRWKGLTHNTPLQDEHAVKLRNMSSVLPESYREMLFEADYQLGEGAIMMLPGTCAELVSIGFQMSAATPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJK3</accession>
    <name>E3EJK3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pgp</name>
        <name evidence="1" type="ORF">PPSC2_12145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56553.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="E3EJK3"/>
    <dbReference type="STRING" id="1406.LK13_24495"/>
    <dbReference type="EnsemblBacteria" id="ADO56553">
        <property type="protein sequence ID" value="ADO56553"/>
        <property type="gene ID" value="PPSC2_12145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2568"/>
    <dbReference type="eggNOG" id="COG0637">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_13_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010976">
        <property type="entry name" value="B-phosphoglucomutase_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02009">
        <property type="entry name" value="PGMB-YQAB-SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56553.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="26943" checksum="973BAA9AF864F9D4" modified="2015-05-27" version="2">MTSIHHVTPTNHECTGDLSASVPVKAVIFDMDGVLVDSEPIYFEVERSSFAHFGAPMTEEEHHTYVGVTLESMWRQVLDRHQLTNTLEEALAYHRKNVMQTITAYEGLMAIDGLERWLDWLREKGIPIAVASSSPRSLIDLIMEKTGLGRYFDIRITGEEVSQGKPAPDIFLYAAELLGIAPDHCIVIEDSRNGVHAAKSAGMRCIGLHNPGSGQQDLSKADYRISSYDDLWALKESLPFGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJS3</accession>
    <name>E3EJS3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26755</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386085.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0280"/>
    <dbReference type="EnsemblBacteria" id="ADO59671">
        <property type="protein sequence ID" value="ADO59671"/>
        <property type="gene ID" value="PPSC2_26755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5656"/>
    <dbReference type="HOGENOM" id="CLU_2495004_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9824" checksum="088C31D05A0CAC6F" modified="2011-01-11" version="1">MTVLNANLKGNTYYIEFTELFLNKLEEQQTITFKSVIFMLERSEEEILGAAVGESFFIVGDEYSVEGVRTEGKIELIRFIPSSHVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJV9</accession>
    <name>E3EJV9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386121.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0316"/>
    <dbReference type="EnsemblBacteria" id="ADO59707">
        <property type="protein sequence ID" value="ADO59707"/>
        <property type="gene ID" value="PPSC2_26610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5618"/>
    <dbReference type="HOGENOM" id="CLU_2667680_0_0_9"/>
    <dbReference type="OrthoDB" id="1377603at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8690" checksum="D7B8A7415AB224BC" modified="2011-01-11" version="1">MASNLNVESEIMLETVFLDRLLESAMIDLNVGFEWNPSNPVKLVDIRKAIKNRIQPTSQPWGDTWKYEVNRVNTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJX1</accession>
    <name>E3EJX1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386404.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0601"/>
    <dbReference type="EnsemblBacteria" id="ADO59990">
        <property type="protein sequence ID" value="ADO59990"/>
        <property type="gene ID" value="PPSC2_28235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5987"/>
    <dbReference type="eggNOG" id="COG3093">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_140230_5_3_9"/>
    <dbReference type="OrthoDB" id="1840229at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11389" checksum="19D8032ACE8881EF" modified="2011-01-11" version="1">MSLSNQYKAGVAIPPGETIQEVIEDREITVIQLAKGIELHEELTKGLLTGKVRITPDIANRLEQFLEIGHSFWLNLERNYNETLLRLWDQNMAVNGGEGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKC7</accession>
    <name>E3EKC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385868.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0060"/>
    <dbReference type="EnsemblBacteria" id="ADO59454">
        <property type="protein sequence ID" value="ADO59454"/>
        <property type="gene ID" value="PPSC2_27790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5889"/>
    <dbReference type="HOGENOM" id="CLU_789064_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="42131" checksum="4D97778E963418AF" modified="2011-01-11" version="1">MVKIENVKTVNSVGFNLEKTNELIEDLKSQGMIVGIEDLGSYLRTQGLIVKEHIGRKRNYIVVGPKLYGVDVTQKGDQVKEFMKEHIKMGRLSFLPESYEKRLTSVDNSVRVKRRGHCIGYDETFMPIEAYKEYQKEFEEKKKEYFEIRDEIVSNWEGLLHRFKEILKISLDELNSIDKEVVFESIISKLPSKEEYKDSFYMTLSAKAFPVTENLGMFDESIQEQIRNGLKQETVSTLYEIIGNTLNDAFLNVSRTLRALQKKDKVSSKTLGALRKSAKRIAQKNIFNNKKIDEIRLGILNVGESSHDTEVMCENAENVLATIYGYACELGIEDTIKFEDSPVTVDDLQMIYEMLSPQLSEPEACLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKG4</accession>
    <name>E3EKG4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386210.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0406"/>
    <dbReference type="EnsemblBacteria" id="ADO59796">
        <property type="protein sequence ID" value="ADO59796"/>
        <property type="gene ID" value="PPSC2_26180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5513"/>
    <dbReference type="HOGENOM" id="CLU_517625_0_0_9"/>
    <dbReference type="OrthoDB" id="2094589at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025119">
        <property type="entry name" value="DUF4046"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13255">
        <property type="entry name" value="DUF4046"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="15"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="116"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="210"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="304"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="398"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="492"/>
            <end position="580"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="584" mass="70313" checksum="2D0357DF753127F1" modified="2011-01-11" version="1">METKDISSFKEDQKIIDIYDAVIEGKLAILPRNFWGKYEEEVQHRLKLCFRYLVLQKLKIKPHEIRLRVQKPFLIKYKLFNAVYQRQSKGLRELLMHIFPEIGYMFPEMEYQDEEIINIYDAALEGRLAQFPQGFWGNPEEEVQHRLKLCLRYLVLEKLKIPPHEILLEVTWLFLSKYKLNYAVYQLQSKGLQELLIDVFPEIEFENKEIINLYNAAIEGKLTRFPRGFWGNHEEEVQHRLKLCLRYLVLEKLKIKPENILLRVQQPFLMKYKLHQVVYKRQSKGLQELLMHIFPEIEIESEDIIDVYDAAIEGKLAQLPNGFWGKHEEEVQHRLQLCLRYLVLEKLKIKPHEILLRVQKPFLVKYKLDYVVYQRQSKGLRELLMNIFPEIEFEDKDIIEVFDAAIEGESAQWPRGFWGKHEEEVQHRLQLCLRYLVLEKLKIKPHEIRLRVQKPFLVKYKLDYVVYQRQSKRLQELLSDIFPEIEYTDEDIINMYDAVIEGRLAQFPHGFWGKEEEEVQHRLKLCLRHVVLQKLNMEPQEILSEVKTSFLMKYKLFHCVYERQTKGLDELLKEAFPEIDKRKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKJ9</accession>
    <name>E3EKJ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59831.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59831">
        <property type="protein sequence ID" value="ADO59831"/>
        <property type="gene ID" value="PPSC2_26030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5476"/>
    <dbReference type="HOGENOM" id="CLU_2602758_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59831.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="9332" checksum="2C0DC795F19B90A2" modified="2015-05-27" version="2">MKMTTHAWVYQHVLLHPRVNTLYNIEIKKLGLGAIPLETLLLVSDRTFHELPDHPHHLLRLAMTKREQYRVKLTLKKKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKP5</accession>
    <name>E3EKP5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385910.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59496">
        <property type="protein sequence ID" value="ADO59496"/>
        <property type="gene ID" value="PPSC2_27600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5847"/>
    <dbReference type="HOGENOM" id="CLU_905693_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="35306" checksum="FD7DDC99BE41754F" modified="2011-01-11" version="1">MEEINIKPLDPPTDLTSSDFFSEILTAAASKNTTISFYEKRDMEESALTSYPEKNKINIIIKSSEIDKRELYIHELLHAKMSLLGFPSFRKFNSIEYPAWIVDSIKSLENTLGHIHIFEEMRKMSVYQTELNEAFASDVIEAIQSETIAELCHAVNFLELSIRDRKVLDGIRGVLREKKTMAFILFEQMEKVINTVKTDSPLNMRETMVQLLRLIDQFIYLDTGINSKLNFFYSICPGFPEHFLDAKASSLLYAVELEQYHDIFILDNIHHQTCFIVNAVAGGKTPKHVVDQVLEEETLGFLINYFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKS8</accession>
    <name>E3EKS8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">T2SP_E domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27450</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385943.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59529">
        <property type="protein sequence ID" value="ADO59529"/>
        <property type="gene ID" value="PPSC2_27450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5810"/>
    <dbReference type="HOGENOM" id="CLU_1123676_0_0_9"/>
    <dbReference type="OrthoDB" id="473670at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="77"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="247" mass="28060" checksum="9FF0E3342801572D" modified="2011-01-11" version="1">MKSINSKVVRLNPNEQTIIDLFRKEGETAISIELKKLLSNPGVAPKEFPIIKELIYLLDHPTFYSLKKLVDSNFISKEDFFKLIEAMKKNKNILIVGPTGSGKSTLLRALLEYQLITSPKQRVVLLERHSELSLENEEPSSNIRQVFNLSMDELNFLQESEKQSLLCIGETTSTNDALALAMGLNTESKILTSINGVNWKVRLKGFVNGRARNMYENTLSKHSFVIVKTDFSPELCVSEIWEEQLQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKY1</accession>
    <name>E3EKY1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386300.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59886">
        <property type="protein sequence ID" value="ADO59886"/>
        <property type="gene ID" value="PPSC2_25535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5413"/>
    <dbReference type="HOGENOM" id="CLU_2438064_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="97" mass="11091" checksum="A7C2E5D0495B1CCE" modified="2011-01-11" version="1">MKLAFYKKNELEQILTKIFQNEASNITCQVSCSEELNIDTIEVYEDGSLLNVIDIEEAYDQIEKYIGEKFTHHDVIEVGDFGEGFAFFIPKMTSKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL82</accession>
    <name>E3EL82_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA-splicing ligase RtcB</fullName>
            <ecNumber evidence="4">6.5.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rtcB</name>
        <name evidence="5" type="ORF">PPSC2_28595</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="5 6">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
            <plasmid evidence="5 6">pSC2</plasmid>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3 4">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="3 4">Binds 2 manganese ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the RtcB family.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386328.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0525"/>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.6068"/>
    <dbReference type="eggNOG" id="COG1690">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
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    <dbReference type="Proteomes" id="UP000006868">
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    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008452">
        <property type="term" value="F:RNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RtcB"/>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF103365"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
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    <keyword evidence="5" id="KW-0614">Plasmid</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
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            <position position="89"/>
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        <ligand>
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            <label>1</label>
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        <location>
            <begin position="198"/>
            <end position="202"/>
        </location>
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            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
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        <location>
            <position position="231"/>
        </location>
        <ligand>
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            <label>2</label>
        </ligand>
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        <location>
            <begin position="322"/>
            <end position="323"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="322"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
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        <location>
            <begin position="367"/>
            <end position="370"/>
        </location>
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            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
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        <location>
            <position position="374"/>
        </location>
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            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
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            <begin position="392"/>
            <end position="395"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
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        <location>
            <position position="471"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
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        <source>
            <dbReference type="PIRSR" id="PIRSR601233-1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR601233-2"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR601233-3"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="RuleBase" id="RU371113"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO59914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="473" mass="53047" checksum="2AF962E51F019AB4" modified="2011-01-11" version="1">MYKEVKKHNDAHREISLPNGKLHVFANDRVFNSLEEKVFEMADNNLRIPRNVHMSYTPDAHVGVGTCIGTTAVWKMSDGFISPSIVGVDIGCGMRVHLTSLHKDQLQDKQLKRSLIEAIEKYVPTNERTNSHYASIDLQEVVTKGIEGLPSLYKEAFEGATSKVENAQFEFDTQYLEMLPQKIWKNAHGQLGTLGGGNHFIELQHVEIDEANHEVAEKWGLFDGQVIVMIHSGSRAWGAMLGREYTKLFKEAMEMWGISNPDPALMYAPMKSIEGQTYLNLMYSALNFAVSNRHMIAYGVQQGFRDIFGAEFEMPVLYDLMHNYALKEFHRNQAMLVHRKGATRALPKGHFLNVPAYKETGHPALIPGSMATASYIMLGQDAGQKNFYSICHGAGRVRSRRATKELITIDQVAQSMRVGEDDEILVNHRTLEGLVDESKYAYKDVDQIIDSIVESGLANVVAKCNPLAVIKGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL94</accession>
    <name>E3EL94_PAEPS</name>
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    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
            <taxon>Bacteria</taxon>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
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    </dbReference>
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    <dbReference type="HOGENOM" id="CLU_1407585_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
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    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="22201" checksum="52944ED913FB5F0A" modified="2011-01-11" version="1">MKEFYLNSLYGKKRKYPEIYKNLQKGFFGKTMPWKIMQEQDIDALREFMVMFCDFVSLHESPIDVDKLTRAIQHSRSGIGGSAMTPFSCHFCGAEEVWGNTAVPNICSSCARKMAEKIAKCGDNILKDEVQVSVDVDITKLKDDIDNLLDNLTFKDSLPNENTEFQSGIKYTLELLKERLEKGKYNRIKNKTF</sequence>
</entry>
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    <accession>A0A0D5ZC86</accession>
    <name>A0A0D5ZC86_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
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        <name evidence="1" type="ORF">PPSC2_26380</name>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="protein sequence ID" value="AKA44350"/>
        <property type="gene ID" value="PPSC2_26380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5560"/>
    <dbReference type="HOGENOM" id="CLU_2193354_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="111" mass="13056" checksum="E99CF2C873A3CD01" modified="2015-05-27" version="1">MEEELRDFIGEGIRIDGRMIPYRLVTAYQYFQAKKYTEEEISKFYTTGIGETVSQIMALKQACYLLRHTSYSCQSLSDSLYNLKMQLILDLKITKGFEFDDPFVEEYGMMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCI6</accession>
    <name>A0A0D5ZCI6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ygdE</name>
        <name evidence="2" type="ORF">PPSC2_13660</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040103876.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01350"/>
    <dbReference type="EnsemblBacteria" id="AKA44257">
        <property type="protein sequence ID" value="AKA44257"/>
        <property type="gene ID" value="PPSC2_13660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2906"/>
    <dbReference type="eggNOG" id="COG2933">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047822_0_0_9"/>
    <dbReference type="OrthoDB" id="902245at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002877">
        <property type="entry name" value="RNA_MeTrfase_FtsJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01728">
        <property type="entry name" value="FtsJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FtsJ" evidence="1">
        <location>
            <begin position="190"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="352" mass="39355" checksum="6122DCC3AD4CDAD4" modified="2015-05-27" version="1">MNTDEQSECALSSSRFVCTANHGFAPYAQEELRRLFGSVKSTMLLPGEIFLATLPAGEIETVRTITGQPPMFLRHLFPVHFQEEGTDLVQVQERLVAFIRNRRELIDQRVSLQVRKGTNSSWTESAGALRLALSEQLSDLPMELVVQGADVIVSVFADTDTWYAGVSHPQDNLSDWSGGAVRFQKEDGQISRAKFKLLEAEATFGIDFSAFHQGLDIGAAPGGWTSFLLERGLKVTAVDPAKMEPSLMKYANLTFLRKNASEVKFKENSFDLLVCDMSWSPKQMARLVTDLLYSLRSGGTAIVTVKLMHKKPLALIHDVIASFEESGMQIQRAKQLFHNRDEITLYMIKYGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCQ5</accession>
    <name>A0A0D5ZCQ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44403">
        <property type="protein sequence ID" value="AKA44403"/>
        <property type="gene ID" value="PPSC2_28720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6094"/>
    <dbReference type="HOGENOM" id="CLU_1813918_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="17149" checksum="E31A60FF2E0EA4D0" modified="2015-05-27" version="1">MYEYFQHGFWMSDKLCAIEAASSHSNTRLSIIGANFRLYTELKQLERELQRHSIFYEVQLPYRNVVLDCVLCWMWIESKHYKWSEDIQSEITELLFENSLEFFTNSVGFLPTFDYQEIIFLEIAVEFIRIADELTLEYRYNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4J7</accession>
    <name>E3E4J7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371498.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2931"/>
    <dbReference type="EnsemblBacteria" id="ADO56896">
        <property type="protein sequence ID" value="ADO56896"/>
        <property type="gene ID" value="PPSC2_13745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2926"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OrthoDB" id="170593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="55088" checksum="46841FCC24B0E5A9" modified="2011-01-11" version="1">MKHTPTIRAELDRYLKQEGLNLTQFGHIAGINRGIVSGIVTGNSSMSVNQIDRITEAMGLPEGYFYDLYVENYIIDIPPNMRRIEPFLYRCAELDKLDAIRRVVGAIMDNLLYSPKLFDIAEELLAQGRYDAALLLYESVAEVEKYQHSERLAICQYRIFTIQIDDDQSRNLRAAILFEPYVERLDEIEQLDALKDLANVYRSLRKWDKVDEIARKLRAKAEIQYTLKHQQKKLKDDESKNSLSRPMFVYITYADLLCASVCDAQGDYQQALQYTYAYADLEWVRETDDDTLYWVEMYQDWARCNIYVNKLLSGDTSVLADYVEYIAETAHTVEDEKLSKLLNVMIAANRYNLNVDDVLSRFKIDIDAFTQLPLSTDMYTQQVVPDYIAWFCYEVAYYYLNRGKYNDGFKQLLCAMVKAHILNNETYFINCTGLFAHFQAYASPEAREEYFKLSEKVWLDNVEKNDTVNRCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S4</accession>
    <name>E3E4S4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nucleotide pyrophosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypjD</name>
        <name evidence="2" type="ORF">PPSC2_14480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430805.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02130"/>
    <dbReference type="EnsemblBacteria" id="ADO57052">
        <property type="protein sequence ID" value="ADO57052"/>
        <property type="gene ID" value="PPSC2_14480"/>
    </dbReference>
    <dbReference type="GeneID" id="66577084"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3090"/>
    <dbReference type="eggNOG" id="COG1694">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_142229_1_0_9"/>
    <dbReference type="OMA" id="MADVLWV"/>
    <dbReference type="OrthoDB" id="1760741at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11531">
        <property type="entry name" value="NTP-PPase_BsYpjD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012359">
        <property type="entry name" value="MazG-related_YpjD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004518">
        <property type="entry name" value="MazG_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42692:SF1">
        <property type="entry name" value="PTHR42692:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03819">
        <property type="entry name" value="MazG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029904">
        <property type="entry name" value="UCP029904_pph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MazG" evidence="1">
        <location>
            <begin position="24"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12557" checksum="DFCA8984379BAF04" modified="2011-01-11" version="1">MEKSLDEIQREVDQYISQFKEGYFSPLAMLARMSEEVGELAREVNHSFGEKPKKTDEADNSIELELGDILFITVCFANSLGINLTEAHDKVMHKFNTRDANRWTKKDTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E569</accession>
    <name>E3E569_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Xkdg</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yqbE3</name>
        <name evidence="1" type="ORF">PPSC2_16260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372015.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3473"/>
    <dbReference type="EnsemblBacteria" id="ADO57429">
        <property type="protein sequence ID" value="ADO57429"/>
        <property type="gene ID" value="PPSC2_16260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3471"/>
    <dbReference type="eggNOG" id="COG5492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073256_0_0_9"/>
    <dbReference type="OMA" id="GYKAVPP"/>
    <dbReference type="OrthoDB" id="844845at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006441">
        <property type="entry name" value="Phage_P2_GpN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05125">
        <property type="entry name" value="Phage_cap_P2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="35097" checksum="6230DB092E35A263" modified="2011-01-11" version="1">MRTNGQIIKSTITSTLDQTALNYQQVDKFTEMAYESTEFLKGIRTINKLSSKGTIDKIGVTGRNLRSKKENIMADNTPTPTLPQVPYAVEPVVLPFEITEEFIRQTARVRGQNGEDIIMAAMTKNYGENMQDIGFNGDTATPNTDPDYAFLSMNNGWLKHAKTKGNYIDWTTLKDPQKKGVLFELERAIPTRLRTGGVFKYFMHPNTFSKRLQALAEKDTSASIQLQIMGGVKKVNSYEVEEVAHMPEGAIIFTYQQNFVLVNTYDMQIRKTTEGREAIYADKRFYAIHSDYDSIFEEPGAVAYVEGVEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D5</accession>
    <name>E3E5D5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutamyl-tRNA amidotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gatA3</name>
        <name evidence="2" type="ORF">PPSC2_17275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372235.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04625"/>
    <dbReference type="EnsemblBacteria" id="ADO57654">
        <property type="protein sequence ID" value="ADO57654"/>
        <property type="gene ID" value="PPSC2_17275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3692"/>
    <dbReference type="eggNOG" id="COG0154">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009600_0_3_9"/>
    <dbReference type="OMA" id="PAIWTIQ"/>
    <dbReference type="OrthoDB" id="1239251at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000120">
        <property type="entry name" value="Amidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020556">
        <property type="entry name" value="Amidase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11895">
        <property type="entry name" value="PTHR11895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00571">
        <property type="entry name" value="AMIDASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Amidase" evidence="1">
        <location>
            <begin position="29"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="462" mass="50505" checksum="F9BA3FF87FE608AA" modified="2011-01-11" version="1">MSKLNSQLSFAAIHELAEGIRTRKISPVEITEHALHRIERLNPKLNVFVTQTSELAIEQAKQSERDIMHGRYKGPLHGISIVHKDLYYTKGIRTTAGSKILNNFVPDYDSTVAAKLHEAGTVLLGKVQTHEFAAGLTTTSPHFGPCLNPWNTELVTGGSSGGSASALAAGLTYLGTGSDTGGSIRIPAALCGVVGMKPTYGRVSRYGIIPMAWSLDHPGPLTRCVMDASLCLDVMSGFDPKDESTVDLPAPGIKMYPNGLRGVRIGLPTSYYYEDLMPEVEAAMKAAINKFRELGAEIIEVSLPLIKHVRSATMAIMMTEMYSYHEKWLETELEQYGPDVRMFLESSRDIPASIYLQSQRARQLIVNDFLNALSGIDILLTPATPITAPRADDDASVFRLNSFTLPTNLTGLPSLSMPCGFSPSGLPINMQLIGRPFEEATVLGIGNTYEMNTDWHKRHPDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5E1</accession>
    <name>E3E5E1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372241.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57660">
        <property type="protein sequence ID" value="ADO57660"/>
        <property type="gene ID" value="PPSC2_17320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3701"/>
    <dbReference type="eggNOG" id="ENOG50331NG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_138509_0_0_9"/>
    <dbReference type="OMA" id="AVHETYI"/>
    <dbReference type="OrthoDB" id="1501553at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168831" evidence="1">
        <location>
            <begin position="28"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18318" checksum="B9B240BD521FFDCE" modified="2011-01-11" version="1">MKKLTVFMLVLCCFSILSACSTDPVKKDLITYVNDGMLPLAQDEKAVTEKYESVTGDNFTDDETLYNTLRDDIIPEYTKYLDKVEAVKTETPEVRAVHETYIKAVSTQKEALITMVDALEKGDLNLINEGNTKLSEGKKLFRDFGEQVNTLAKEHDVKINKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W5</accession>
    <name>E3E5W5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YunF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yunF</name>
        <name evidence="2" type="ORF">PPSC2_19810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07030"/>
    <dbReference type="EnsemblBacteria" id="ADO58184">
        <property type="protein sequence ID" value="ADO58184"/>
        <property type="gene ID" value="PPSC2_19810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19810"/>
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    <dbReference type="eggNOG" id="COG1801">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046519_0_0_9"/>
    <dbReference type="OMA" id="YLRMHGR"/>
    <dbReference type="OrthoDB" id="1068600at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002763">
        <property type="entry name" value="DUF72"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036520">
        <property type="entry name" value="UPF0759_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30348">
        <property type="entry name" value="PTHR30348"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01904">
        <property type="entry name" value="DUF72"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117396">
        <property type="entry name" value="SSF117396"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="269"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="276"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="33331" checksum="284342E19CF2D124" modified="2011-01-11" version="1">MIQIGLTGWGDHDDLYPTGTKANQKLSVYGSHFPIVEMDSSFYAVQPTDRMARWAAETPDSFSFLVKAYQGMTGHTRGKQPYFKTIDAMYEALHASILPLRETGKLKAVLFQYPPWFDCTRENVAILRDTKNRMGEVPSVLEFRHQSWFTADFRKQTLAFMLKEGWIHSVCDEPQAGPGSVPIVPQATDSNLTIVRLHGRNVSGWNQSSAPNWREVRYLYRYNEQELTEWKDRLLELEQQSREVCVIFNNNSGGDAAANAKQLMTMLGMEPKPFPPRKPPDADHGPEQLELF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5X4</accession>
    <name>E3E5X4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372765.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4243"/>
    <dbReference type="EnsemblBacteria" id="ADO58193">
        <property type="protein sequence ID" value="ADO58193"/>
        <property type="gene ID" value="PPSC2_19850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4230"/>
    <dbReference type="eggNOG" id="ENOG5032SVK">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1853235_0_0_9"/>
    <dbReference type="OMA" id="SAPWAIQ"/>
    <dbReference type="OrthoDB" id="1868329at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="14724" checksum="E59AFBE64D797CE0" modified="2011-01-11" version="1">MGFFLDMRSFTNSSKTGEGPDIQLGPVPERFGMITLRTFLVPNPIVSFSGSIGLIGELGDTYAVEIVRGADYDPSEVVYRAEGVLGVTGSNETQAFNAQDLSAPWAIQTVYSSYISGVSTTVRNGPEVFTGIASTPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E600</accession>
    <name>E3E600_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">N-acetylglucosamine-6-phosphate deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nagA</name>
        <name evidence="9" type="ORF">PPSC2_19975</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="7">Binds 1 divalent metal cation per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the metallo-dependent hydrolases superfamily. NagA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372791.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07195"/>
    <dbReference type="EnsemblBacteria" id="ADO58219">
        <property type="protein sequence ID" value="ADO58219"/>
        <property type="gene ID" value="PPSC2_19975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4256"/>
    <dbReference type="eggNOG" id="COG1820">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032482_2_1_9"/>
    <dbReference type="OMA" id="YMKNPRL"/>
    <dbReference type="OrthoDB" id="1026967at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008448">
        <property type="term" value="F:N-acetylglucosamine-6-phosphate deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006044">
        <property type="term" value="P:N-acetylglucosamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00854">
        <property type="entry name" value="NagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003764">
        <property type="entry name" value="GlcNAc_6-P_deAcase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11113:SF14">
        <property type="entry name" value="PTHR11113:SF14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038994">
        <property type="entry name" value="NagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00221">
        <property type="entry name" value="nagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="8">
        <location>
            <begin position="75"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="244"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="333"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="5">
        <location>
            <position position="299"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="220"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="276"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR038994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR038994-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR038994-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR038994-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="408" mass="44042" checksum="92BBD0A3E9ACD2B2" modified="2011-01-11" version="1">MKSDEMNSNIPQLLYGQVVVGNDIIPNGVVIIEGQSIVYAGSEEDMPVDWTSLVLGNPEEVATQAANVVRQEEGYLLPGFIDIHIHGGNGEDFMDSDPRVLDAITSFHSSQGTTAMLATTMTAPKERIERVLKEVHTYMAYPMPHAQLEGVHLEGPFISPNWAGAQNPEHIVPPNLAWMAEWEQRYPGLVRQVTLAPEQNGALELIAWLRSHGITAALGHTDATYEEVEQAASSGLNHAVHTFNAMTPLHHRKPGAAGAVLADPRIEAEIIADGIHVHPAAISLLAKLKQDHNLILITDAMSATGLEDGHYKLGDLPVIVQDGVARLEDGVTLAGSTLTMIEGFRYLVQHVGLSIPEASQMASLNPARSLNIADRTGSLEAGKQADVLLLNADLNLQGVWIKGVRKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E627</accession>
    <name>E3E627_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rrf2 family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nsrR1</name>
        <name evidence="1" type="ORF">PPSC2_12850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371316.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2745"/>
    <dbReference type="EnsemblBacteria" id="ADO56712">
        <property type="protein sequence ID" value="ADO56712"/>
        <property type="gene ID" value="PPSC2_12850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2736"/>
    <dbReference type="eggNOG" id="COG1959">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107144_4_3_9"/>
    <dbReference type="OMA" id="EIYYATQ"/>
    <dbReference type="OrthoDB" id="1794390at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030489">
        <property type="entry name" value="TR_Rrf2-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01332">
        <property type="entry name" value="HTH_RRF2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="16612" checksum="A2CEC8532FE30B6E" modified="2011-01-11" version="1">MKQEYCTPTQHPKWFGLAVQALVILSQEDKSIACPSIELAKYLQSEPSLLRRILSVLAKEGLIGTREGRDGGYHLRKPAESIRLVDVYDVFRSDSRLSFGITETAGTHPLGKCMKSTLEDITQEMDDSIRGVLSKYTIADLANQLEAKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E685</accession>
    <name>E3E685_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aldose epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gaLM</name>
        <name evidence="1" type="ORF">PPSC2_13145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371374.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00820"/>
    <dbReference type="EnsemblBacteria" id="ADO56770">
        <property type="protein sequence ID" value="ADO56770"/>
        <property type="gene ID" value="PPSC2_13145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2798"/>
    <dbReference type="eggNOG" id="COG2017">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052486_2_0_9"/>
    <dbReference type="OMA" id="EEATHNH"/>
    <dbReference type="OrthoDB" id="710313at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008183">
        <property type="entry name" value="Aldose_1/G6P_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014718">
        <property type="entry name" value="GH-type_carb-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01263">
        <property type="entry name" value="Aldose_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="SSF74650"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="339" mass="38709" checksum="25ADC7AE392FBD93" modified="2011-01-11" version="1">MTQQHTAIGDLYYGIPAIRLKFGRYEAVALPGNGANLITFRDNETGYSFLREPDAESIEAFKQSPSVYGIPFLFPPNRYEDGKFLWNGVTYELPINEEATHNHLHGFLHTVRWEVEDYGSGEQGSYVVMNQHVREGHPMFRYLPFTFTMKLTYSLDEFGLHQRYVIHNEGDQPIPNLFAFHTAIRVPFVPDSSPEDYKIKVTIGERRELTDRLLATGQFQPLSPEEELMKTTGVSPYFASMDNHYTAAPQNGRNYMELTHSKTGATLVYDVGTAYKHWMIWNNKANKEFICPEPQMNMINAPNRPDLPAEDIGLIALAPGHIFETTSRLYCVTPNKTKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E698</accession>
    <name>E3E698_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371387.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2817"/>
    <dbReference type="EnsemblBacteria" id="ADO56783">
        <property type="protein sequence ID" value="ADO56783"/>
        <property type="gene ID" value="PPSC2_13205"/>
    </dbReference>
    <dbReference type="GeneID" id="66577342"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2811"/>
    <dbReference type="HOGENOM" id="CLU_205933_0_0_9"/>
    <dbReference type="OMA" id="AYGCTTE"/>
    <dbReference type="OrthoDB" id="1988715at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="7260" checksum="5CE6AB65A0F4860A" modified="2011-01-11" version="1">MRANQDHMLTQYYLQFCYTCQDAYGCTTEEDCKQCAERYAEEEDHEVLDETQRYLQLVHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6F8</accession>
    <name>E3E6F8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Endolytic murein transglycosylase</fullName>
            <ecNumber evidence="7">4.2.2.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Peptidoglycan polymerization terminase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yrrL</name>
        <name evidence="7" type="synonym">mltG</name>
        <name evidence="8" type="ORF">PPSC2_18990</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the transglycosylase MltG family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.-" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372604.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06200"/>
    <dbReference type="EnsemblBacteria" id="ADO58027">
        <property type="protein sequence ID" value="ADO58027"/>
        <property type="gene ID" value="PPSC2_18990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4070"/>
    <dbReference type="eggNOG" id="COG1559">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025574_2_2_9"/>
    <dbReference type="OMA" id="IAMPGKA"/>
    <dbReference type="OrthoDB" id="708179at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008932">
        <property type="term" value="F:lytic endotransglycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd08010">
        <property type="entry name" value="MltG_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02065">
        <property type="entry name" value="MltG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003770">
        <property type="entry name" value="MLTG-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30518">
        <property type="entry name" value="PTHR30518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02618">
        <property type="entry name" value="YceG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00247">
        <property type="entry name" value="TIGR00247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 7 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="site" description="Important for catalytic activity" evidence="7">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="342" mass="38446" checksum="80BE3C4A23B1F361" modified="2011-01-11" version="1">MLTLLLVLVCIAGGAILYIWNAMQPVQPKTQPVAFTVVRGTGTSAIADTLEQKGLIRNALVFKAYVKFKQQGNAFQAGKYEAQPGATFDQLIAKLSAGDVVKEEMIRFTIPEGFTIRQMAEKLQKEGLADRQQFLQLANDPSAFDVPLVRDIPKQAGLRYALEGYLFPETYELKKGSTTKDIIQTMLEQTQKRLDTISDLDAGLQQRSETLHQLLTVASLVEREVVVDDERPIVAGVIYNRLQQDKKLEIDATVQYMLDKQKERLYYKDLAVESPYNTYIHQGLPPGPIASPSLKSVVAALQPKSTDYLFYVTKKDGTHKHLFAKTYKDHLHNIQVSNRKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6P3</accession>
    <name>E3E6P3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Potassium uptake system protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">trkA3</name>
        <name evidence="3" type="ORF">PPSC2_20335</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372875.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07590"/>
    <dbReference type="EnsemblBacteria" id="ADO58303">
        <property type="protein sequence ID" value="ADO58303"/>
        <property type="gene ID" value="PPSC2_20335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4336"/>
    <dbReference type="eggNOG" id="COG0569">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046525_3_2_9"/>
    <dbReference type="OMA" id="KDEVHKR"/>
    <dbReference type="OrthoDB" id="1768241at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006037">
        <property type="entry name" value="RCK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003148">
        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02080">
        <property type="entry name" value="TrkA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02254">
        <property type="entry name" value="TrkA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51202">
        <property type="entry name" value="RCK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RCK N-terminal" evidence="1">
        <location>
            <begin position="5"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="2">
        <location>
            <begin position="136"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="24412" checksum="0531B51531BEED01" modified="2011-01-11" version="1">MKTQQFVVIGLGRFGSSLALQLVDMGCEVLGIDRNEDVVDSMSEILTHTVVADATDEDALRSLGIRNFDCGIVAIGDDIQVSILTAILLKELGVRKVVAKAISVLHGRALEKLGVDRVIYPERDMGIRVAHQLVTPNLLDYLELSKEYSIVELNVPACLNGKTLAELNARTRFGCSIVALHTANGILIAPTAMDRLKADDIMVIIGSNDNIGRFEDEVVNVNEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6X1</accession>
    <name>E3E6X1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutaredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_21450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373091.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08645"/>
    <dbReference type="EnsemblBacteria" id="ADO58523">
        <property type="protein sequence ID" value="ADO58523"/>
        <property type="gene ID" value="PPSC2_21450"/>
    </dbReference>
    <dbReference type="GeneID" id="66575779"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4560"/>
    <dbReference type="eggNOG" id="COG0695">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026126_9_3_9"/>
    <dbReference type="OMA" id="IVYTSTN"/>
    <dbReference type="OrthoDB" id="2045232at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097573">
        <property type="term" value="F:glutathione oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004362">
        <property type="term" value="F:glutathione-disulfide reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011767">
        <property type="entry name" value="GLR_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00195">
        <property type="entry name" value="GLUTAREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="1">
        <location>
            <begin position="5"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="76" mass="8710" checksum="21C9CB8625360BA5" modified="2011-01-11" version="1">MEKAIVYTSTNCPHCRQVKSYLAEKGVEYEERNIETNEAFAQEVWDMGIRAVPLTLIGEERISGMNKTKFEKVLNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Z7</accession>
    <name>E3E6Z7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9 10">Protein translocase subunit SecY</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">secY</name>
        <name evidence="13" type="ORF">PPSC2_22335</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10">The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 11">Membrane</location>
            <topology evidence="1 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 12">Belongs to the SecY/SEC61-alpha family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373259.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09800"/>
    <dbReference type="EnsemblBacteria" id="ADO58699">
        <property type="protein sequence ID" value="ADO58699"/>
        <property type="gene ID" value="PPSC2_22335"/>
    </dbReference>
    <dbReference type="GeneID" id="66575600"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4736"/>
    <dbReference type="eggNOG" id="COG0201">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030313_0_1_9"/>
    <dbReference type="OMA" id="FAMWLGE"/>
    <dbReference type="OrthoDB" id="1567535at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01465">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026593">
        <property type="entry name" value="SecY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002208">
        <property type="entry name" value="SecY/SEC61-alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030659">
        <property type="entry name" value="SecY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023201">
        <property type="entry name" value="SecY_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10906">
        <property type="entry name" value="PTHR10906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00344">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004557">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103491">
        <property type="entry name" value="SSF103491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00967">
        <property type="entry name" value="3a0501s007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00755">
        <property type="entry name" value="SECY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00756">
        <property type="entry name" value="SECY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9 11" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9 11" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 9 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="18"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="65"/>
            <end position="89"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="151"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="176"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="215"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="269"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="313"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="368"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="395"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="432" mass="47832" checksum="DCE8BD65445A1278" modified="2011-01-11" version="1">MFKTLKNIWRVEDLRTRILFTLFILFVYRIGSFVPVPGVNKQVFTSQDQAGSELFGLLNTFSGGALYQFSIFALGIMPYITASIIVQLLSMDVIPKLAEWAKQGEHGKKKLAQITRYGTVILGLIQAFGTSIGFNRLYGAAMIPGATFADYLVIAIVLTAGTTFLMWLGEQITEKGIGNGISIVIFAGIAAGIPRHIRTIVESQFIQADQLFMNILKAIIIALVVVLIIVGVIYIQQGIRKIPVQYAKRVVGNKMYGGQNTHIPMKINAAGVIPVIFAVSLLQFPTIIASFWADHAWAKWITTYLYYDKPLGMVLYVVMIIGFTFFYTFVQMNPQQMADNMKKNGGYIPGIRPGKATEKYLTRVMSRLTMTGALFLAVISVLPVFFGSLSGLPRSVQIGGTSLLIIIGVALDTMKQIESQLIKRHYKGFINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7G5</accession>
    <name>E3E7G5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">Otg1</name>
        <name evidence="3" type="ORF">PPSC2_24555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373709.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12035"/>
    <dbReference type="EnsemblBacteria" id="ADO59176">
        <property type="protein sequence ID" value="ADO59176"/>
        <property type="gene ID" value="PPSC2_24555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5201"/>
    <dbReference type="eggNOG" id="COG5373">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_333657_0_0_9"/>
    <dbReference type="OMA" id="LDGNWVT"/>
    <dbReference type="OrthoDB" id="458141at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019286">
        <property type="entry name" value="DUF2339_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38434">
        <property type="entry name" value="PTHR38434"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10101">
        <property type="entry name" value="DUF2339"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="199"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="234"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="259"/>
            <end position="279"/>
        </location>
    </feature>
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        <location>
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        </location>
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        </location>
    </feature>
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        <location>
            <begin position="337"/>
            <end position="356"/>
        </location>
    </feature>
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        <location>
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        </location>
    </feature>
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        <location>
            <begin position="390"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="417"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="450"/>
            <end position="466"/>
        </location>
    </feature>
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            <begin position="478"/>
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        </location>
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        <location>
            <begin position="500"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
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            <begin position="529"/>
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        </location>
    </feature>
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        </location>
    </feature>
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        <location>
            <begin position="598"/>
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        </location>
    </feature>
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        </location>
    </feature>
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    </feature>
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        </location>
    </feature>
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        <location>
            <begin position="732"/>
            <end position="752"/>
        </location>
    </feature>
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        <location>
            <begin position="758"/>
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        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="783"/>
            <end position="801"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="813"/>
            <end position="830"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="850" mass="98038" checksum="1A871F2F1D52031D" modified="2011-01-11" version="1">MEDFKDRLHTIRQEQNKLLKEYQTLIADYEASDIILENEVLQKKFEDYQARCIHLEERVRHIEQENGKLRTALTEQMLSEKANMIRISREKLETYFASRTAEGENRLTSIEYGAKNRVDQLIQQTTHELKEDQDEIVARLRLFSEEIRERIMEQRRRFQEAERKLLHQTAHELHQLGEEEISEETMQKRMKQNQFEMMLGLNWINKLGILLIILGVGAAFKYSYSNWFTGNMKGVAFFLLGALMLGGGEWLYRKQKQTFALGILGGGISVLYGSIFYSYFLLEIIGMYTGIGLSVLVTVTAVLLSLRYESRTICSFGLVGGYLPLFSYMAANGLEGNAVYIAMGYLFLLNLLILLVSFRKRWVIVQYISFLLNTPLMVVLTWLSDSTIASMLYAIITFAMYLGMTLWVPFRFKTKLSWLDFSLLALNTVVSCSVLYSLFGDAGLDDYKGLLALVFCLVYGGLGQWVRRYIPEEKQTKILFYATSLTFAILMIPFQFGVRWLSMGWLIEAVLLTLYGHRYRLKELERAGWGILGLCLGAFFFIDFPIYLLSGFETDYFGLKYTLITLGMLIVTVFYAIEFSRPNAFKNNRLYEMHIMQGFKYVALVNVYLYLLYEAGHWYNIVVSDEFAHYTLYKVLLFTCVSLVLAYFLPKVRLLYDRVIKYYSLALYIIGYALALVVTVAIPTLHEDYAQNTAADYVALIVLAAFNVLVFFSSRDFLNALMTRQYRSNELYPVIMGVYLLGIITAFLGVQFRLGDAGLVFSLVYLLLAILYIVYGFLKRVVYIRRFGLGLTLLSTGKLLWYDLHLLTSGSTIVAYFSFGVVLLAISYIYQKVSNRMGETIIKKDTEEKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7I1</accession>
    <name>E3E7I1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">L-lactate dehydrogenase</fullName>
            <shortName evidence="6">L-LDH</shortName>
            <ecNumber evidence="4 6">1.1.1.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ldh</name>
        <name evidence="12" type="synonym">ldh3</name>
        <name evidence="12" type="ORF">PPSC2_13220</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the conversion of lactate to pyruvate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>(S)-lactate + NAD(+) = H(+) + NADH + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:23444"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16651"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.27"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="6">Allosterically activated by fructose 1,6-bisphosphate (FBP).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Fermentation; pyruvate fermentation to lactate; (S)-lactate from pyruvate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the LDH/MDH superfamily. LDH family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.27" evidence="4 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371390.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00895"/>
    <dbReference type="EnsemblBacteria" id="ADO56786">
        <property type="protein sequence ID" value="ADO56786"/>
        <property type="gene ID" value="PPSC2_13220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2814"/>
    <dbReference type="eggNOG" id="COG0039">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045401_1_1_9"/>
    <dbReference type="OMA" id="ASCAEYI"/>
    <dbReference type="OrthoDB" id="870724at2"/>
    <dbReference type="UniPathway" id="UPA00554">
        <property type="reaction ID" value="UER00611"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004459">
        <property type="term" value="F:L-lactate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00488">
        <property type="entry name" value="Lactate_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011304">
        <property type="entry name" value="L-lactate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018177">
        <property type="entry name" value="L-lactate_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000102">
        <property type="entry name" value="Lac_mal_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00086">
        <property type="entry name" value="LLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="SSF56327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01771">
        <property type="entry name" value="L-LDH-NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00064">
        <property type="entry name" value="L_LDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0520">NAD</keyword>
    <keyword evidence="6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ldh_1_N" evidence="10">
        <location>
            <begin position="10"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="Ldh_1_C" evidence="11">
        <location>
            <begin position="150"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="125"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="153"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6 7">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="19"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="84"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 8">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="123"/>
            <end position="125"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="125"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="148"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="158"/>
        </location>
        <ligand>
            <name>beta-D-fructose 1,6-bisphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <note>allosteric activator</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>beta-D-fructose 1,6-bisphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <note>allosteric activator</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="modified residue" description="Phosphotyrosine" evidence="6">
        <location>
            <position position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="33781" checksum="B9B458FB192D49BF" modified="2011-01-11" version="1">MSLKPYKRSRVAIVGMGAVGTTTGYTLLLRQRMQELVFIDVNVKKAKGEMLDMNHGLPFLGGVKVWAGDYEDCRNADIIIVAAGASQKPGETRIDLLKRNAEIFESIIDNIVKVNTHGILLIATNPVDILSYISWKRSGWPSSRVIGSGTLLDSARFRYLIGKQKGIDPRSIHAHIIGEHGDSELPVWSTANVAGTPLELDEGTKNEIFENTKNAAYEIIDAKGATSYAIGLALDRIVAAILGDEGSVLNVSTLLEDYNGVSDVYLGVPSIVDHNGVREILDLPLNDEERARFVQSADKLKDQISKVHM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7I9</accession>
    <name>E3E7I9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">xylR3</name>
        <name evidence="4" type="ORF">PPSC2_13255</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Transcriptional repressor of xylose-utilizing enzymes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ROK (NagC/XylR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371398.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00945"/>
    <dbReference type="EnsemblBacteria" id="ADO56794">
        <property type="protein sequence ID" value="ADO56794"/>
        <property type="gene ID" value="PPSC2_13255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2822"/>
    <dbReference type="eggNOG" id="COG1940">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067512_0_0_9"/>
    <dbReference type="OMA" id="KSCPQYI"/>
    <dbReference type="OrthoDB" id="1130699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0859">Xylose metabolism</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="333" mass="37833" checksum="5D24995F7CA468E9" modified="2011-01-11" version="1">MEKANTNLIKEINLNLVRKVLKQISKATKPQLAALTDLSVVTINTLMQELLNNGEIFEDEIVPSNGGRHALTYRFNYEYSLALIIHINEKQGTDVVSTTVVNLNEDALMKEEHPFQIFDDAQFYSTIQGIISLYPSIKVIGIGIPGQSVDGEITVSSHERLNGIRLAEDVQSKFGLPVMVENDVNAAVCGYVYREQLDEDQCVLAIYFPENSPPGMGIYLRNGVLKGKHGLAGEIKFLPSIVWDESKGREVFFNSICEIIQTLQSIFDPDQIVVYRENIEEDSFFRFLETYKAKHEMPLYPDIVLSDLFYEDFKTGLRELTLKELERPIIVFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7V4</accession>
    <name>E3E7V4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Formate-dependent phosphoribosylglycinamide formyltransferase</fullName>
            <ecNumber evidence="3">6.3.1.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5'-phosphoribosylglycinamide transformylase 2</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Formate-dependent GAR transformylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">GAR transformylase 2</fullName>
            <shortName evidence="3">GART 2</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Non-folate glycinamide ribonucleotide transformylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Phosphoribosylglycinamide formyltransferase 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">purT</name>
        <name evidence="6" type="ORF">PPSC2_14165</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>ATP + formate + N(1)-(5-phospho-beta-D-ribosyl)glycinamide = ADP + H(+) + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide + phosphate</text>
            <dbReference type="Rhea" id="RHEA:24829"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:143788"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.1.21"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; IMP biosynthesis via de novo pathway; N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide from N(1)-(5-phospho-D-ribosyl)glycinamide (formate route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PurK/PurT family.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.21" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371587.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01820"/>
    <dbReference type="EnsemblBacteria" id="ADO56987">
        <property type="protein sequence ID" value="ADO56987"/>
        <property type="gene ID" value="PPSC2_14165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3023"/>
    <dbReference type="eggNOG" id="COG0027">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011534_1_3_9"/>
    <dbReference type="OMA" id="GMVTMIT"/>
    <dbReference type="OrthoDB" id="1677960at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00127"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043815">
        <property type="term" value="F:phosphoribosylglycinamide formyltransferase 2 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004644">
        <property type="term" value="F:phosphoribosylglycinamide formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01643">
        <property type="entry name" value="PurT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003135">
        <property type="entry name" value="ATP-grasp_carboxylate-amine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005862">
        <property type="entry name" value="PurT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02222">
        <property type="entry name" value="ATP-grasp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01142">
        <property type="entry name" value="purT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 3" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ATP-grasp" evidence="5">
        <location>
            <begin position="117"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="region of interest" description="5'-phosphoribosylglycinamide binding" evidence="3">
        <location>
            <begin position="20"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="5'-phosphoribosylglycinamide binding" evidence="3">
        <location>
            <begin position="361"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>N(1)-(5-phospho-beta-D-ribosyl)glycinamide</name>
            <dbReference type="ChEBI" id="CHEBI:143788"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="153"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="158"/>
            <end position="163"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="193"/>
            <end position="196"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="265"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="284"/>
        </location>
        <ligand>
            <name>N(1)-(5-phospho-beta-D-ribosyl)glycinamide</name>
            <dbReference type="ChEBI" id="CHEBI:143788"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="354"/>
        </location>
        <ligand>
            <name>N(1)-(5-phospho-beta-D-ribosyl)glycinamide</name>
            <dbReference type="ChEBI" id="CHEBI:143788"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="42882" checksum="046E6A23FE671786" modified="2011-01-11" version="1">MWGAPFSAKAKKMLLLGSGELGKEVIIEAQRLGVECIAVDRYELAPAMQVAHRSHCLDMQDAEALKALIRKEQPDIIVPEIEAIATGALEELEQEGFHVVPTARAARLTMDREGIRRLAAEKLQLPTAAYRFADHFEQLRSAVQELGTPCVVKPLMSSSGKGQSVCRALEDAESCWNTALEGARAKTTRVIVEAFVPFESEITLLTVRSESGTTFCPPIGHIQKDGDYVESWQPHGMTDKQLSEAQDIARTITDELGGYGLFGVELFLTADSVIFSEVSPRPHDTGMVTMITQDLSEFALHVRAILGFPVPSVTLLTPGASATLKAEVATRDFAISGLHDALLLPRTQVRVFGKPETKPGRRMAVALSAAEDVETARKTAKEAANMLKVEVNHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Z4</accession>
    <name>E3E7Z4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ypeB</name>
        <name evidence="1" type="ORF">PPSC2_14735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371703.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02370"/>
    <dbReference type="EnsemblBacteria" id="ADO57107">
        <property type="protein sequence ID" value="ADO57107"/>
        <property type="gene ID" value="PPSC2_14735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3144"/>
    <dbReference type="eggNOG" id="COG2959">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045803_0_0_9"/>
    <dbReference type="OMA" id="WRITSEA"/>
    <dbReference type="OrthoDB" id="1554098at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014239">
        <property type="entry name" value="Spore_YpeB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14620">
        <property type="entry name" value="YPEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02889">
        <property type="entry name" value="spore_YpeB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="461" mass="52212" checksum="17607556175BE372" modified="2011-01-11" version="1">MYKRLSAVLFPVVTLIMIGAFVWGYQQSQMRREVSSQANRMSIKAENQYQRAFHDLSFHMDQLHSQLGNAVAVHTTSHAMHRKCLMNVWRIASEAQNEVNQLPLNVMPFNHAKDLLSHLSAFSYQTAVRDLDHEPLNEKEISNLKTLYNNSKEISKNMHEVQQKVISKNLRWMDVDMAAGSQTGPKDNTIIDGFKTVDKKVENYKELDWGPSVASIYDKRSVKKLSLPAVDAGQIKRNAADFTGKPESQIRVNENGKGTEWASFTATLLNKQQPVATMDFTKKGGKLISYHDMRSVGPKKATRNEAVRYASEYLEQKGYKGMKPVAYDESGNLANITFASQQGDVIIYPEKITVRSGLDNGQVIGFQCSDYVYEHSHLRRIPQAKLNLNEARAKLNPEFRETYHRKALIENELSNEVLCYEFGGKINGSIYRIYINANTGMEETIEQVKDSDEAQVTASNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E832</accession>
    <name>E3E832_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">exoQ</name>
        <name evidence="4" type="ORF">PPSC2_14910</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371738.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3186"/>
    <dbReference type="EnsemblBacteria" id="ADO57145">
        <property type="protein sequence ID" value="ADO57145"/>
        <property type="gene ID" value="PPSC2_14910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3181"/>
    <dbReference type="eggNOG" id="COG3307">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039809_2_0_9"/>
    <dbReference type="OMA" id="YGYQAFW"/>
    <dbReference type="OrthoDB" id="754057at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007016">
        <property type="entry name" value="O-antigen_ligase-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04932">
        <property type="entry name" value="Wzy_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="57"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="80"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="151"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="194"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="219"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="309"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="339"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="363"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="403" mass="44811" checksum="5543D52A56BE8CB6" modified="2011-01-11" version="1">MKHILTVAGLLAFSIPFACQGLSPRVITISLLILLFSYTMLLPSLKSLIATLADNPLLTLLMMYIAASCIWAEQEQTSSVLMVLKFIAFSTFGLYLVTHYTTQGCIRLLVVTLSILSVLNLLAVVLVPSFAIHGGVEHTGLWKGISGHKNTLGTLSLLSFVSHVIYFFRGTRKALHIGFILLNALLLIECQSTTSLVLTSSLFVFILFILLFKRIRSIALRGFFVSCSCLLVLLGLALTFTYGDAIASEFGKTTTLTGRTEIWLGIDGAIQSHYWFGHGYGSFWAARPSIYANGIRFDLTSSHSGFRDLWIDVGLIGLLATVILVVTTLFKFRIGKTDMYTWLTAAVFFLFIVLNNITDSRFLNSLSIYWIIFMVIVIKVQERHRLTVAEKANTAVWSTRPLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E866</accession>
    <name>E3E866_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polyprenyl synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">crtE</name>
        <name evidence="3" type="ORF">PPSC2_15065</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57179.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02685"/>
    <dbReference type="EnsemblBacteria" id="ADO57179">
        <property type="protein sequence ID" value="ADO57179"/>
        <property type="gene ID" value="PPSC2_15065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3215"/>
    <dbReference type="eggNOG" id="COG0142">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014015_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00723">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00444">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57179.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="32562" checksum="0B374EBE99C90869" modified="2015-05-27" version="2">MNRLSFKEYLAVTADAVSSALTEQFPAHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYIHLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESKMGKKTQSDVEQEKVTYPYFIGVDASLRQVEELTVSAKKVIAEGGIPDSSRLLEIADYLMKRDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8C8</accession>
    <name>E3E8C8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Nitrite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nasD3</name>
        <name evidence="9" type="ORF">PPSC2_15750</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371906.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03445"/>
    <dbReference type="EnsemblBacteria" id="ADO57320">
        <property type="protein sequence ID" value="ADO57320"/>
        <property type="gene ID" value="PPSC2_15750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3361"/>
    <dbReference type="eggNOG" id="COG1251">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003291_0_0_9"/>
    <dbReference type="OMA" id="PAGWEVY"/>
    <dbReference type="OrthoDB" id="1128731at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007419">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012744">
        <property type="entry name" value="Nitri_red_NirB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041575">
        <property type="entry name" value="Rubredoxin_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04324">
        <property type="entry name" value="Fer2_BFD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18267">
        <property type="entry name" value="Rubredoxin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02374">
        <property type="entry name" value="nitri_red_nirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="7">
        <location>
            <begin position="4"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="Rubredoxin_C" evidence="8">
        <location>
            <begin position="315"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="6">
        <location>
            <begin position="411"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="6">
        <location>
            <begin position="483"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="5">
        <location>
            <begin position="604"/>
            <end position="704"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="384"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="385"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="724" mass="78297" checksum="C10B7D5279285665" modified="2011-01-11" version="1">MIKRLVVIGNGMAGIKCVEEILSLEPERFQITIFGAEPRPGYNRVLLSKMLQEESTFQHIVTHSWDWYEENGVKLQAGERVCRIDVATGMVETESGIQEPYDILVLATGSLPFMPPIPGVRKEGVIAFRDVNDCETMARYAKTYRKATVIGGGLLGLEAAQGLLNLGMETDVVHNAQYLMNRQLDRTAAVLLQRRLEQQGMRFHLAKDTVNIIGRNRAQGLMFADGNRLETDLVVLAVGIRPNIGLAQDSGLTVNRAIVVDDYMRTSIPGIYAVGECAEHRGISYGLVAPLYEQAKVLAKVICGRETAPYEGTVPYAQLKVAGIHVFSAGDIREEGSEIAIMEYNGMQEIYKKVMMRAGNITGAILFGDTAESTSLLGMVRRGAPTTELTSQNNSKSKAEDAAEALPEGETVCACNGVSKGDILRAIATDKLKTVEEVKSRTKASGSCGGCRPLVAALVKNGLSRETASGPVVTPTAQEVVSVCGCTHYDHDSLKTAMVDAVCRTPEEVVSRLGWTRQQGCELCRPAVLYYLESLGLRNGSATNQLGIDVAVQSTLPYEGEVGSVGLSFTNLNAERRDCVDPAPIDQACGGVIWLRERLAAVWGSLSLPSPVAVAVSPGSEYPGGVLVHDIGISRSPAGWEVYAGGHAGHPVRQGLLLGLEENPEEVVLMAVTCLQIYRHSARYGEKMWEWIERTGVLALRESVLDATLRSELTGSLRSTMLTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8D7</accession>
    <name>E3E8D7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Protein lplB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplB11</name>
        <name evidence="7" type="ORF">PPSC2_15790</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371915.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03485"/>
    <dbReference type="EnsemblBacteria" id="ADO57329">
        <property type="protein sequence ID" value="ADO57329"/>
        <property type="gene ID" value="PPSC2_15790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3370"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="OMA" id="NNWFRFT"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="169"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="209"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="262"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="296" mass="33748" checksum="773D3D2323BF5142" modified="2011-01-11" version="1">MRSLQRTWPFHIMLLPAIIFLIVFSYIPMGGIVMAFQNYKPWLGITGSEWVGLDNFRFLFQREDSLQVVWNTLIIAVLKMFFNLLVPFVFAILLNEIRKVGLQRSIQTMVYLPHFLSWVILGGILIDLLATDGFMNRILGSIGIQPIFFLGDNNWFRFTVIVSDIWKEFGYNTIVFLAALAGINPSLYEASEMDGASRWRQTLHITVPSLIPMVVVVGTLALGNVLNAGFDQIFNLYNPLVYQKGDIIDTFVYRTALINGEMGFATAIGLFKSVISMILILISYRLAYKWAGYRIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8K2</accession>
    <name>E3E8K2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Glycine--tRNA ligase beta subunit</fullName>
            <ecNumber evidence="9">6.1.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Glycyl-tRNA synthetase beta subunit</fullName>
            <shortName evidence="9">GlyRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">glyS</name>
        <name evidence="11" type="ORF">PPSC2_16825</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly)</text>
            <dbReference type="Rhea" id="RHEA:16013"/>
            <dbReference type="Rhea" id="RHEA-COMP:9664"/>
            <dbReference type="Rhea" id="RHEA-COMP:9683"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.14"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372134.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04160"/>
    <dbReference type="EnsemblBacteria" id="ADO57551">
        <property type="protein sequence ID" value="ADO57551"/>
        <property type="gene ID" value="PPSC2_16825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3590"/>
    <dbReference type="eggNOG" id="COG0751">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007220_2_2_9"/>
    <dbReference type="OMA" id="LPIPKRM"/>
    <dbReference type="OrthoDB" id="213210at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004814">
        <property type="term" value="F:arginine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004820">
        <property type="term" value="F:glycine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006420">
        <property type="term" value="P:arginyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006426">
        <property type="term" value="P:glycyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00255">
        <property type="entry name" value="Gly_tRNA_synth_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008909">
        <property type="entry name" value="DALR_anticod-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015944">
        <property type="entry name" value="Gly-tRNA-synth_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006194">
        <property type="entry name" value="Gly-tRNA-synth_heterodimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30075">
        <property type="entry name" value="PTHR30075"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05746">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02092">
        <property type="entry name" value="tRNA_synt_2f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01045">
        <property type="entry name" value="TRNASYNTHGB"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00211">
        <property type="entry name" value="glyS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50861">
        <property type="entry name" value="AA_TRNA_LIGASE_II_GLYAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DALR_1" evidence="10">
        <location>
            <begin position="589"/>
            <end position="681"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF05746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="691" mass="76758" checksum="43A982F7345643E5" modified="2011-01-11" version="1">MSKDLLFEIGLEEVPARFIPNAIQQLKERMTAWLDSSRIAYSAVEAYATPRRLAVLVKEVAEKQEDINEEVKGPSRKIALDEAGNWSKAALGFARSQGVDPEQFTFKELGGVEYIYATKSSIGVPTADVLSEGLLHILHAMTFPKFMRWASYDFKFVRPIRWLVALFGSDIVNLEIAGVQSGNVTRGHRFLGQEAVVESPADYVEVLRKQHVIVDIEERQSLIVKQIEALAAEKDWTIAVKDDLLEEVLYLVETPTVLFGGFDPAFLNIPKDVLITSMREHQRYFPVLDRTGKLLPYFVTVRNGGSQSLEVIAKGNEKVLRARLSDAKFFYEEDQKLEIKDALSKLESIVFHEELGTVGDKVRRIRRIADALAEKLRVSPDTQESVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEEVARAVFEHYQPRFAGETVPSTNAGAIVSIADKIDTITGCFSIGIIPTGSQDPYALRRQAAGIVQILLDRKLSATLSDVFNIALDVHSNFGNMKRSADEIRKELHEFFGLRVKKLLSETLRYDVVDAVLSAGYDDVASVVNRGAALMTAVLTGDVFKATVESFNRVGNLAAKAVHKSVNTGEFTEQGEKNLYEAWYGAYESYCTALQEGDATQALALASSITPAVTAFFDSVMVMAEDDAVRNNRLALLAAIDSELKRFADFSKLVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8N9</accession>
    <name>E3E8N9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372328.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57748">
        <property type="protein sequence ID" value="ADO57748"/>
        <property type="gene ID" value="PPSC2_17735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3791"/>
    <dbReference type="HOGENOM" id="CLU_1101368_0_0_9"/>
    <dbReference type="OrthoDB" id="2122742at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="29947" checksum="1155043F2A55009E" modified="2011-01-11" version="1">MENIIYLSKTIFDWDYYSQWATILPDDKWERPYEMWEYSRALVDNATTEFELGDGIANLKRALNHRLQLIERSYNLRSIHPSWRNKGYLEILEDFGLVRPYLMKSLLTIRNDIEHNDADPPEKERCKEFVDIVWYFLKSTDPLVQVLKSSNAYDLYDEEGYETHYGFNFELDYKDLNSIKISGWFYDELILNEPREGFFAVEFNSLHTKKNWESSPYHSEKLESDKWLDGKILDLDSETKKIIVSQVLSAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8P3</accession>
    <name>E3E8P3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">mcpA7</name>
        <name evidence="11" type="ORF">PPSC2_17755</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372332.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05040"/>
    <dbReference type="EnsemblBacteria" id="ADO57752">
        <property type="protein sequence ID" value="ADO57752"/>
        <property type="gene ID" value="PPSC2_17755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3795"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="WAEENHN"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="305"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="329"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="9">
        <location>
            <begin position="400"/>
            <end position="650"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="687" mass="75192" checksum="EC81FB9D8F28C237" modified="2011-01-11" version="1">MSQNMKKRAFRSSSIANTLAMVLLVIIVVVFATLGTFMYASTQSMLVKQQEAMLQTKTQATVSQFDALFKEKGSLVKQMSTNTLFRQYIETTESAEMAKTSPHAAATQATLAAIVKEEPSFADAWIAGIHGKGFFLQNDGAASKPDFDIHSRPYFKPAVEADGLYYSEPYKDVNTGNVVMGIFYPIKDSSNQLIGFAAVDIAFKDIPAVMQSYSLGSTGYSILASKTGDILYHPDQNKVLKEKINESTGDLGEIGKKMIAGESGVQLINDNGERRYIGYATSKDTGWSVGLTISEQEALSELRTFTWITIGGFAAATILLVVICYITLRYLLRSIPKLLAKIKLIENGDLTVPFDTNSHNEIGQISQGVHNMVQKIQGMLQMVGGSAQVLNQSSNDLQSISSRTAITMNDTATAINEIANATNYQSIETDNILQKTGALSGQIDEIANDAKTIETMVQTSAEQSGQGLAVVDQLSKWAEENHNSTQAMSAIIQDIDLSRHEISSIVDTVNQIATQTNLLALNASIEAARAGEQGKGFAVVAGEVRKLAEQTARATQEIYKKVRVIEEKTSVSVEHTVHGLKIAEENARSVEDTKQVFFSINKDLEDLKLRMIQISNNTSKVHKHKDEILQALEIISSTTEENSASTEEVSASTQEQLESFEQVAELSKQLNQLSTKLQDELKQFKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8T6</accession>
    <name>E3E8T6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Molybdopterin synthase subunit 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">moaE3</name>
        <name evidence="1" type="ORF">PPSC2_17965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372375.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05285"/>
    <dbReference type="EnsemblBacteria" id="ADO57795">
        <property type="protein sequence ID" value="ADO57795"/>
        <property type="gene ID" value="PPSC2_17965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3839"/>
    <dbReference type="eggNOG" id="COG0314">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089568_1_2_9"/>
    <dbReference type="OMA" id="GEICLFV"/>
    <dbReference type="OrthoDB" id="1877633at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00756">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036563">
        <property type="entry name" value="MoaE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003448">
        <property type="entry name" value="Mopterin_biosynth_MoaE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02391">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54690">
        <property type="entry name" value="SSF54690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="17029" checksum="8DC4D54C1DAD56D6" modified="2011-01-11" version="1">MRVFEIVTEPILPQTYADYVLRPEAGAVTLFTGHVREWTQGVRTLYLAYEAYVPMAEKKLAEIGREIEQKWEGTRVAIAHRIGELQIGDIAVVIAVSSPHRSDAYQANEYAIERIKEIVPIWKREIWEDGTQWIGQQKKKPEEIRHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8U3</accession>
    <name>E3E8U3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">narJ</name>
        <name evidence="2" type="ORF">PPSC2_18000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372382.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05320"/>
    <dbReference type="EnsemblBacteria" id="ADO57802">
        <property type="protein sequence ID" value="ADO57802"/>
        <property type="gene ID" value="PPSC2_18000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3846"/>
    <dbReference type="eggNOG" id="COG2180">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084469_3_0_9"/>
    <dbReference type="OMA" id="YLPLMCE"/>
    <dbReference type="OrthoDB" id="1975985at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051131">
        <property type="term" value="P:chaperone-mediated protein complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020945">
        <property type="entry name" value="DMSO/NO3_reduct_chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003765">
        <property type="entry name" value="NO3_reductase_chaperone_NarJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036411">
        <property type="entry name" value="TorD-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43680">
        <property type="entry name" value="PTHR43680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02613">
        <property type="entry name" value="Nitrate_red_del"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89155">
        <property type="entry name" value="SSF89155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00684">
        <property type="entry name" value="narJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="22215" checksum="55766A868B860D61" modified="2011-01-11" version="1">MINVAKLYEFKPSFGFFAQQLMYPEKLDFHPAFLEASFNPDHPAYTHANMYWSLMQEFSMEEIQEMYTETFDFQKNCALYMTYFKFEDAKERGQMLVKLKVLYEMYGLEMPDGELPDYLPLMCEFLYAAEWVQDAKTTENFRMPIAILEDGTYHLLKALEKMESPYFHLVKGLRETLKACVEQEAAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8X2</accession>
    <name>E3E8X2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YrzE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yrzE</name>
        <name evidence="2" type="ORF">PPSC2_19195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372645.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06395"/>
    <dbReference type="EnsemblBacteria" id="ADO58070">
        <property type="protein sequence ID" value="ADO58070"/>
        <property type="gene ID" value="PPSC2_19195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4112"/>
    <dbReference type="eggNOG" id="ENOG5033314">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_149197_3_0_9"/>
    <dbReference type="OMA" id="KERGWMI"/>
    <dbReference type="OrthoDB" id="1813372at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023804">
        <property type="entry name" value="DUF3792_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12670">
        <property type="entry name" value="DUF3792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04086">
        <property type="entry name" value="TIGR04086_membr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14173" checksum="FDAAE8BEE15EAAC7" modified="2011-01-11" version="1">MELIRRWCSFRLAHPILSGLFYAFAWMLFGALILSILLWMTQMQEQDLSLYTYIVHAFAMLSGGFVAGKRSTNKGWYQGGITGILYGLIVLLVGFLALDAGMNGKDLLHLGIAFVIGAGGGMFGINFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E926</accession>
    <name>E3E926_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Probable dual-specificity RNA methyltransferase RlmN</fullName>
            <ecNumber evidence="11">2.1.1.192</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">23S rRNA (adenine(2503)-C(2))-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">23S rRNA m2A2503 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Ribosomal RNA large subunit methyltransferase N</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">tRNA (adenine(37)-C(2))-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">tRNA m2A37 methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">rlmN</name>
        <name evidence="13" type="ORF">PPSC2_24795</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>adenosine(2503) in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine(2503) in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42916"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10152"/>
            <dbReference type="Rhea" id="RHEA-COMP:10282"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74497"/>
            <dbReference type="EC" id="2.1.1.192"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>adenosine(37) in tRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine(37) in tRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:43332"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10485"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74497"/>
            <dbReference type="EC" id="2.1.1.192"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="11">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="11">Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the radical SAM superfamily. RlmN family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.192" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373766.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12290"/>
    <dbReference type="EnsemblBacteria" id="ADO59233">
        <property type="protein sequence ID" value="ADO59233"/>
        <property type="gene ID" value="PPSC2_24795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5255"/>
    <dbReference type="eggNOG" id="COG0820">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029101_0_1_9"/>
    <dbReference type="OMA" id="KVVFMGM"/>
    <dbReference type="OrthoDB" id="1111428at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070040">
        <property type="term" value="F:rRNA (adenine-C2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002935">
        <property type="term" value="F:tRNA (adenine-C2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01849">
        <property type="entry name" value="RNA_methyltr_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040072">
        <property type="entry name" value="Methyltransferase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027492">
        <property type="entry name" value="RNA_MTrfase_RlmN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004383">
        <property type="entry name" value="rRNA_lsu_MTrfase_RlmN/Cfr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30544">
        <property type="entry name" value="PTHR30544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006004">
        <property type="entry name" value="CHP00048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00275">
        <property type="entry name" value="adenosine_C2_methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00048">
        <property type="entry name" value="rRNA_mod_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 11" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9 11" id="KW-0408">Iron</keyword>
    <keyword evidence="10 11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 11 13" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="7 11" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 11 13" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Radical SAM core" evidence="12">
        <location>
            <begin position="98"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="11">
        <location>
            <begin position="164"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="11">
        <location>
            <begin position="219"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="11">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <feature type="active site" description="S-methylcysteine intermediate" evidence="11">
        <location>
            <position position="341"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO59233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="365" mass="41267" checksum="284FC2089CC2A757" modified="2011-01-11" version="1">MKKESIYGLTLDQLTAWLLEHGYKKSRALQVWDALYRKRITDFAAMTEVHENCTRLLAENFSIETLEEHVKQQSADGTVKFLFRLQDGNLIETVLMRHKFGLSVCVTTQVGCNIGCSFCASGLLKKSRDLSSGEIVGQIMKVQLYLDQERPGDRVSHVVVMGIGEPFDNFVNLSDFIRVIKDHKGLAIGQRHITVSTSGLADKIIEFADSDLHVNLAISLHAPNNEIRTRIMKINRAIPIEKLMQAIDYYLDKTNRRITLEYILLKDVNDGKEHALELAELVGHRRNLANVNLIPYNPVDEHSQYQRSESESITGFYDVLKKQGISCSVRLEHGVDIDAACGQLRSKQIRKDANSSRNAEREAIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9A0</accession>
    <name>E3E9A0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydhT3</name>
        <name evidence="7" type="ORF">PPSC2_15985</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 26 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57373.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324529.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03675"/>
    <dbReference type="EnsemblBacteria" id="ADO57373">
        <property type="protein sequence ID" value="ADO57373"/>
        <property type="gene ID" value="PPSC2_15985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3415"/>
    <dbReference type="eggNOG" id="COG4124">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016930_2_0_9"/>
    <dbReference type="OrthoDB" id="669354at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016985">
        <property type="term" value="F:mannan endo-1,4-beta-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006080">
        <property type="term" value="P:substituted mannan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022790">
        <property type="entry name" value="GH26_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000805">
        <property type="entry name" value="Glyco_hydro_26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40079">
        <property type="entry name" value="PTHR40079"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02156">
        <property type="entry name" value="Glyco_hydro_26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00739">
        <property type="entry name" value="GLHYDRLASE26"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51764">
        <property type="entry name" value="GH26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168723" evidence="5">
        <location>
            <begin position="35"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="GH26" evidence="6">
        <location>
            <begin position="44"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57373.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="39084" checksum="1C7395FE3D171916" modified="2015-05-27" version="2">MKSHSTRFWLQRVLLLMLVLLFSGSQQSFIVADAAPPINAHASAKARQLLAYLTNVPDDMLISGQHDYLEAPDEQNNKLQQISGQYAGLHGYEFGGLANQSRTALREQRQRVVNSAIQWSRDGGIVAITFHQALPGKPKTWKNVQAKITQAEFNRYVTPGTPQYKQLIADLDEAALSLKTLRDADVPVLWRPYHEMNGNWFWWGNKQNYAKLWDLMYDRFVHVHHLDNLLWVWSPNAPNAYSTPYSLSFPGINRVDVLAADIYNNDYRSSYYTELLKLAQGKPMGIGESDILPSAKVLQNQPAWAYAMTWGKELSATNSQAAIRHFMNQNNIITRDLLHESLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9A8</accession>
    <name>E3E9A8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371967.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03710"/>
    <dbReference type="EnsemblBacteria" id="ADO57381">
        <property type="protein sequence ID" value="ADO57381"/>
        <property type="gene ID" value="PPSC2_16020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3423"/>
    <dbReference type="eggNOG" id="COG1917">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081245_0_0_9"/>
    <dbReference type="OMA" id="PHYHQNA"/>
    <dbReference type="OrthoDB" id="1928636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00835">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin type-1" evidence="1">
        <location>
            <begin position="20"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="24919" checksum="AFB2C0B0416A66C9" modified="2011-01-11" version="1">MNSYMDYTSPTVQFTYDLSDNILFQKDAQNSINELSIQQLNTLANVSLLDIRLSTANVVEPHYHQNATELIYCISGAVTVSLINPFTRELRHFPITPGQVANVPQGWWHYLVATVDNTHLLAIFNAPVPEFILGSDVLRLTPSNIMAHTYCLDEKKVQEALAPIKKPIIIGPSNDCKQQPPRKPGIHVRLTDTSSHRQVAPQRGYIYTHGYPGFSFNPYQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9E9</accession>
    <name>E3E9E9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sodium:phosphate symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yqeW</name>
        <name evidence="6" type="ORF">PPSC2_16945</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372162.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04280"/>
    <dbReference type="EnsemblBacteria" id="ADO57580">
        <property type="protein sequence ID" value="ADO57580"/>
        <property type="gene ID" value="PPSC2_16945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3619"/>
    <dbReference type="eggNOG" id="COG1283">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050150_0_1_9"/>
    <dbReference type="OMA" id="AFMVIVI"/>
    <dbReference type="OrthoDB" id="1341748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015114">
        <property type="term" value="F:phosphate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005436">
        <property type="term" value="F:sodium:phosphate symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044341">
        <property type="term" value="P:sodium-dependent phosphate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003841">
        <property type="entry name" value="Na/Pi_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030147">
        <property type="entry name" value="NptA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010">
        <property type="entry name" value="PTHR10010"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010:SF46">
        <property type="entry name" value="PTHR10010:SF46"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02690">
        <property type="entry name" value="Na_Pi_cotrans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="49"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="153"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="198"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="235"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="264"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="307"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="35585" checksum="C5D1302BF7392450" modified="2011-01-11" version="1">MFIHVILPLCGGLLIFLGGMKLMEAALRHLAGPFLTRWLNRATVSPWRGMLFSSGITALLQSSTAVTVLTIGLVNAGLLTYGRTLGIILGTNIGTCLTTELMGLQLGKLAVPLLCGSLLCWGTAVLWGETVAGRQYAAAGASPSSNGLSRPQAVQFISLVFAGFSLILAGIRVMQAVGPWIEQAGLFRWFLDHAAANMWWAFAAGACLTALVHSSAAVIGMAISLAAAGALPVDVGIAIVIGSNVGTCVTALIAAVGGSVSGKFVAWSHVLLNVGGALLFMPLIPGLDMVATWISTEPGAKVAHAQTLFNVISSLLALPLCYLPIWTRIEERMSLHRTKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9G3</accession>
    <name>E3E9G3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Chaperone protein DnaK</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">HSP70</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Heat shock 70 kDa protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Heat shock protein 70</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">dnaK</name>
        <name evidence="13" type="ORF">PPSC2_17010</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Acts as a chaperone.</text>
    </comment>
    <comment type="induction">
        <text evidence="9">By stress conditions e.g. heat shock.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 10">Belongs to the heat shock protein 70 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372176.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04345"/>
    <dbReference type="EnsemblBacteria" id="ADO57594">
        <property type="protein sequence ID" value="ADO57594"/>
        <property type="gene ID" value="PPSC2_17010"/>
    </dbReference>
    <dbReference type="GeneID" id="66576642"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3633"/>
    <dbReference type="eggNOG" id="COG0443">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005965_2_4_9"/>
    <dbReference type="OMA" id="ISIKRHM"/>
    <dbReference type="OrthoDB" id="161217at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00332">
        <property type="entry name" value="DnaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012725">
        <property type="entry name" value="Chaperone_DnaK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029048">
        <property type="entry name" value="HSP70_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19375">
        <property type="entry name" value="PTHR19375"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100920">
        <property type="entry name" value="SSF100920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100934">
        <property type="entry name" value="SSF100934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02350">
        <property type="entry name" value="prok_dnaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00297">
        <property type="entry name" value="HSP70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00329">
        <property type="entry name" value="HSP70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0143">Chaperone</keyword>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 9" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="582"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="223"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="533"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="591"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphothreonine; by autocatalysis" evidence="9">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00014415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="611" mass="65460" checksum="075F372DD805FABB" modified="2011-01-11" version="1">MSKVIGIDLGTTNSCVAVMEGGEAVVIPNPEGARTTPSVVGFKKDGERTVGETAKRQAITNPDRTIMSIKRHMGTNHKENIDGKEYSAQEISAMILQKLKADAEAYLGQTVSQAVITVPAYFNDGQRQATKDAGKIAGLEVLRIVNEPTAAALAYGMEKSEDQTILVYDLGGGTFDVSILELGDGFFEVKATSGDNKLGGDDFDQVIIDYLVNEFKKDQGIDLSKDKAAVQRLKDAAEKAKKELSGVLTTTISLPFITVADGVPQHLELNLTRAKFEELSAGLVERTLGPTRQAMKDAGMSASDIDKIVLVGGSTRIPAVQEAIKKLTGKEPHKGVNPDEVVALGAAVQAGVLTGDVKDVVLLDVTPLSLGIETAGGVFTKMIDRNTTIPTSKSQVFSTYADNQPSVEIHVLQGEREMAAGNKTLGRFQLGDIPPAPRGVPQIEVTFDLDANGIVNVSATDKGTGKSQKITITSSSGLSDEEVERMMKDAELHAEEDKKRKELVEAKNAADQLIYSVDKTIKDLGEKADAGEVEKANAAKENLQKTLESDNLEDIKKATEELTEIVQQLSVKLYEQAAQAAQAQDGAADSKGRDNVVDADYEVVDEDQKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9P5</accession>
    <name>E3E9P5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cadC3</name>
        <name evidence="2" type="ORF">PPSC2_18150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57835.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3883"/>
    <dbReference type="EnsemblBacteria" id="ADO57835">
        <property type="protein sequence ID" value="ADO57835"/>
        <property type="gene ID" value="PPSC2_18150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3877"/>
    <dbReference type="eggNOG" id="COG0640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097806_3_5_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57835.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9637" checksum="7993A41B7EDC77C2" modified="2015-05-27" version="2">MQQAVKIYKALGEPTRLKIALLLKEESDQCCSVLGEKLNSVAISTLSHHLKQMAESGLLTYRKEGTFIYYSLDVEAAQKYAPFLIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9T6</accession>
    <name>E3E9T6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Vitamin K-dependent gamma-carboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sdpB</name>
        <name evidence="7" type="ORF">PPSC2_18325</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372455.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3924"/>
    <dbReference type="EnsemblBacteria" id="ADO57876">
        <property type="protein sequence ID" value="ADO57876"/>
        <property type="gene ID" value="PPSC2_18325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3921"/>
    <dbReference type="eggNOG" id="COG3011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045120_0_1_9"/>
    <dbReference type="OMA" id="GTALHYV"/>
    <dbReference type="OrthoDB" id="1387983at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008488">
        <property type="term" value="F:gamma-glutamyl carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017187">
        <property type="term" value="P:peptidyl-glutamic acid carboxylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007263">
        <property type="entry name" value="DCC1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011020">
        <property type="entry name" value="HTTM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007782">
        <property type="entry name" value="VKG_COase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04134">
        <property type="entry name" value="DCC1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05090">
        <property type="entry name" value="VKG_Carbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00752">
        <property type="entry name" value="HTTM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="96"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="121"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="220"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="250"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="402"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="domain" description="HTTM" evidence="6">
        <location>
            <begin position="10"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="446" mass="52856" checksum="CF3F11C3A264BE8C" modified="2011-01-11" version="1">MLLNYRNFFMNERFLIGTSILRICIGLILLFNYFIHYKQRYFFWHESGINIYSTGYKSLTWSLYNLNSSALFFDFIYHLGIIVTIFYLIGYKGRLFSILAYLFFYSLYVRSFHISDGGDNLLIVNMFFLLFTNNTAYFSLDSKMNNSRGKDSKDSLLYKLSVIIHNFAVLFCIIQLCIVYFFSGMYQLMGEMWQNGTALYYISQVREFSRPILDYMVNHYVGLTILFTYLSIIIKIAFPFAVINKRLKPFVVIAMILFHIGIAIGMGLLTFSLIMIVMELLLFTDQEYKKLYHFIKISFRKITITIRRKTRRLGYVSFQHKQILVFYDGWCPVCTNIKDYLYKLDYFRMLRLVSFRNSSLVQAYKLDVDELQRRMHSFSLNDPSRIHRGIDSIAQICTRIPYLWWAVPFIIIFKKMGIGGYLYDYIASKRKVIPVGNCDDLCELHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9V2</accession>
    <name>E3E9V2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GTPase Obg</fullName>
            <ecNumber evidence="7">3.6.5.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">GTP-binding protein Obg</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">obg</name>
        <name evidence="11" type="ORF">PPSC2_19340</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.-" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372660.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06540"/>
    <dbReference type="EnsemblBacteria" id="ADO58085">
        <property type="protein sequence ID" value="ADO58085"/>
        <property type="gene ID" value="PPSC2_19340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4127"/>
    <dbReference type="eggNOG" id="COG0536">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011747_2_1_9"/>
    <dbReference type="OMA" id="VVFDWEP"/>
    <dbReference type="OrthoDB" id="603226at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042254">
        <property type="term" value="P:ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01898">
        <property type="entry name" value="Obg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.210.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01454">
        <property type="entry name" value="GTPase_Obg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014100">
        <property type="entry name" value="GTP-bd_Obg/CgtA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036346">
        <property type="entry name" value="GTP-bd_prot_GTP1/OBG_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006074">
        <property type="entry name" value="GTP1-OBG_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006169">
        <property type="entry name" value="GTP1_OBG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036726">
        <property type="entry name" value="GTP1_OBG_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045086">
        <property type="entry name" value="OBG_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015349">
        <property type="entry name" value="OCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11702">
        <property type="entry name" value="PTHR11702"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09269">
        <property type="entry name" value="DUF1967"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01018">
        <property type="entry name" value="GTP1_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002401">
        <property type="entry name" value="GTP_bd_Obg/CgtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102741">
        <property type="entry name" value="SSF102741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82051">
        <property type="entry name" value="SSF82051"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02729">
        <property type="entry name" value="Obg_CgtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03595">
        <property type="entry name" value="Obg_CgtA_exten"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00905">
        <property type="entry name" value="GTP1_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51883">
        <property type="entry name" value="OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51881">
        <property type="entry name" value="OCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Obg" evidence="10">
        <location>
            <begin position="1"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="OBG-type G" evidence="8">
        <location>
            <begin position="159"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="domain" description="OCT" evidence="9">
        <location>
            <begin position="354"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="165"/>
            <end position="172"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="190"/>
            <end position="194"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="212"/>
            <end position="215"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="282"/>
            <end position="285"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="313"/>
            <end position="315"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="436" mass="48120" checksum="A72D89CFD56B1282" modified="2011-01-11" version="1">MFVDKAKIFVKGGDGGDGLIAFRREKYVPNGGPAGGDGGNGGDVIFRVDEGLRTLMDFRYQRHFKAQRGVKGRNKSQHGANAEHMIVRIPPGTVIMDDDTGEVLADMTRHGQQVVVAKGGRGGRGNIRFATPSNPAPELAENGAEGQERYITLELKVMADVGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTITPNLGVVDVGDQRNFVMADLPGLIEGAHEGTGLGHEFLRHIERTRIIIHVVDMAGSEGRDPFEDWTKINDELKQYNAALAERPQIVAANKMDMPEAEENLAHFKEQIATIRPDLEIMPISSLTRQGVKELLYRAADLLDQIPDEPVVEEVAEVNERKVFKLDTAEDEGFTIVRENDTFVVHSPKIERMMKRMQMNSHDAILKLARTLRHMGVDAELRKRGATDGTSVRIADFEFEFVEGSSYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA90</accession>
    <name>E3EA90_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ugpB3</name>
        <name evidence="2" type="ORF">PPSC2_20700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372951.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07945"/>
    <dbReference type="EnsemblBacteria" id="ADO58382">
        <property type="protein sequence ID" value="ADO58382"/>
        <property type="gene ID" value="PPSC2_20700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4415"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_10_5_9"/>
    <dbReference type="OMA" id="TEKYPWI"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168098" evidence="1">
        <location>
            <begin position="28"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="453" mass="51179" checksum="9A62B22277630AF3" modified="2011-01-11" version="1">MLKRKLWIVCMCLIVGLMSACSSNESSKPVDLQGHEQVTLTYASWGSTNEKKVQQEIAKKFTEKYPWIKINYMHIPGDYVTKLTTMFAANQAPDVFPIYKAQALQWAEQGKLYNLNEFLKEDKELTKESLIPNSVIYWDKDKVAGVKVTEEAFALYYNKDLFDEAGVALPPVKAEEAWTWEQFLETAQKLTIDKAGNNALSPNFDASNIKQYGVRFDTWMWHLLVPSNNVSVISDKGDSLNLENPDVIEAVQKMADLINVYHVAPSPTQSKNIPSPAVALQSKRVAMDLDGQWVQLDLGESKVNFGVGVLPKLKSSKTILFGEPEVISAKTKHPKEAWMFYKFLLDAESGLDMHSSGLWMPVMKKWYTEPDLISKWADVKPGHADGYRDAVMIQTLHNGVNSYDYYLKNSEKINAIINPALDQVWLGKKTVEQAFKEVSAKANAEFKGTYPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAL6</accession>
    <name>E3EAL6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Polymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_22705</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373313.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4832"/>
    <dbReference type="EnsemblBacteria" id="ADO58774">
        <property type="protein sequence ID" value="ADO58774"/>
        <property type="gene ID" value="PPSC2_22705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4808"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3307">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011929_0_0_9"/>
    <dbReference type="OMA" id="HNTAGTV"/>
    <dbReference type="OrthoDB" id="1472679at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007016">
        <property type="entry name" value="O-antigen_ligase-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04932">
        <property type="entry name" value="Wzy_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="86"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="111"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="143"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="233"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="272"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="312"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="349"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="447"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="488"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="542"/>
            <end position="563"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="818" mass="92326" checksum="2F9893A88425FD63" modified="2011-01-11" version="1">MSNPVYGKQANTSTRGDKRPAIFWVLIVGIILFLAWAPFQAALFNGQMLDFEKPLYWALIISTILLILGIVTYYKKFKLEEQRDWLAVLVLLLPLTYVLSLTSAASHYLAMNMVVVQCVYAALFIISIYLLQDRLGNKIIHNLIMTIAYIIVGFGFINWFGQWVLAGKMVGWFSQYVYQYRYINAVMTDTNGLRLTSVFQYANTYAAFLMAFLFAAVFCLMKSKLWYGKAIHAFMLVPILVSLFLTLSRGGLVMLPVVFVLLLLFLNPARQIIWILHCAIAGVASISILAAITDMGLQLNKTYNGGEAAKGWGLLIGVSLAVAVVLWLVERYLAPKLENVLKGWNSRKLSNLWLPVGSVVVIGLLAFLLMGTGLRSVLPENVQVRLENINFRQHSVLERLVFYEDAAKSIKDHPIIGSGGGGWATLYEKYQDYPYSSRQAHNFFMQYLVEVGIFGFVILMSFIIYIFYKYIRSYIRQNDEERDSHFLYLILALSILLHSLLDFNMSYVFMGILVFVSLGGMAAAMDSKPLKRLSMSATGFRILYSVVIGILSIVVLFAGLRFVQSANAANNAKQIMAVSTSFEEIQSAINKDLELRPTHPDSVIRLAALYKNVYDQTKKEEFYNAAIEVLNTGLKAEPYNKIMLNSKVNLLQAKGENEQAFSILDNNISNFNWDNDWYNMLITQAYTIGNKAREQKDTAKEQKYFQAGLTAYQQVLDRVAHLKTIPPEIELPRTFEVTPGIALSTGKIEFMSGKPAEAASILKNGLKDDLSDATNREVARYYVAALQKQGQNDEALYKKLIQADPKEKEQIEQLKSEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="79" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAM4</accession>
    <name>E3EAM4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">UvrABC system protein A</fullName>
            <shortName evidence="14">UvrA protein</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Excinuclease ABC subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14 17" type="primary">uvrA</name>
        <name evidence="17" type="ORF">PPSC2_22745</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.</text>
    </comment>
    <comment type="subunit">
        <text evidence="14">Forms a heterotetramer with UvrB during the search for lesions.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="14">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="14">Belongs to the ABC transporter superfamily. UvrA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373321.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10260"/>
    <dbReference type="EnsemblBacteria" id="ADO58782">
        <property type="protein sequence ID" value="ADO58782"/>
        <property type="gene ID" value="PPSC2_22745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4816"/>
    <dbReference type="eggNOG" id="COG0178">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001370_0_2_9"/>
    <dbReference type="OMA" id="PFEGIIP"/>
    <dbReference type="OrthoDB" id="152379at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009381">
        <property type="term" value="F:excinuclease ABC activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00205">
        <property type="entry name" value="UvrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004602">
        <property type="entry name" value="UvrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041552">
        <property type="entry name" value="UvrA_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041102">
        <property type="entry name" value="UvrA_inter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17755">
        <property type="entry name" value="UvrA_DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17760">
        <property type="entry name" value="UvrA_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00630">
        <property type="entry name" value="uvra"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 14 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 14" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 14" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 14" id="KW-0228">DNA excision</keyword>
    <keyword evidence="12 14" id="KW-0234">DNA repair</keyword>
    <keyword evidence="11 14" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10 14" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="2 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 14 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 14" id="KW-0677">Repeat</keyword>
    <keyword evidence="13 14" id="KW-0742">SOS response</keyword>
    <keyword evidence="8 14" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="ABC transporter" evidence="16">
        <location>
            <begin position="600"/>
            <end position="935"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="14">
        <location>
            <begin position="252"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="14">
        <location>
            <begin position="738"/>
            <end position="764"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="33"/>
            <end position="40"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14 15">
        <location>
            <begin position="639"/>
            <end position="646"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO58782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="953" mass="105973" checksum="326A50A9981A0E59" modified="2011-01-11" version="1">MANESIIIKGARAHNLKNIDVTIPRDKFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMEKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHPHCPEHGIEITSQTVEQMVDRILQYPEKTRLQILAPLVSGRKGEHKTLFTDIAKQGFVRVRVNGELRELSEKIELEKNKKHSIEVVVDRIVVKEDVRARLSDSIETALNLSGGQLLVDIIGQEELRFSSNFACPICGFSIDELSPRMFSFNSPFGACPDCDGLGVKMVVDPDLLIPDPEKSIEDGAFQAWSGGTSTYYPQFLQSVCEHYGIPQDIPVSQLTSEQMNLILHGTGDQKIRFRYENDFGQRKEAYVTFEGIIPNLERRYRDTASEGIREFIEGFMSAKPCNTCKGHRLKKESLSVTIQERNIAYVTALSVGEASHFFHTLELSEKEQSIANLILKEINSRLGFLVNVGLEYLTLSRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISALEHMRNLGNTLIVVEHDEDTMMAADYIIDIGPGAGIHGGMIMSQGTPQEVMEDPNSLTGQYLSGRKFIPVNTERRKPADKWLEIRGAKENNLKNVNVKIPLGVFTAVTGVSGSGKSTLVNEILYKTLARDLNRARVRPGQHKEIRGLEHIEKVVEIDQSPIGRTPRSNPATYTGVFDDIRDLFSQTNEAKVRGYKKGRFSFNVKGGRCESCRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKGKSIADVLEMTVEDATAFFENIPKIHRKIQTLMDVGLGYIKLGQPATTLSGGEAQRVKLASELYRRSTGKTIYILDEPTTGLHVHDIDRLLTVLHRLVDSGETVLVIEHNLDVIKTADFLIDLGPEGGSGGGTILATGTPEQLVKVEESYTGRYLKPILERDTQRSQALQTVDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT5</accession>
    <name>E3EAT5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yrdQ</name>
        <name evidence="3" type="ORF">PPSC2_23745</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373535.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5060"/>
    <dbReference type="EnsemblBacteria" id="ADO58999">
        <property type="protein sequence ID" value="ADO58999"/>
        <property type="gene ID" value="PPSC2_23745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5025"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="AFERGCT"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="31528" checksum="EE294B059B1E6D9F" modified="2011-01-11" version="1">MDLNDLNIFQTVAAHGSVSKAAAELSYVQSNVTARIKLLEKELQTPLFYRHKRGMILNAEGKRLLQYTKSILSQFEEMKHAFQNTSAPSGVLEIGIVETVIALPAILHAYYSKYPDVELSLKAGVTESLVQEVAEMRLDGAFVTGPVKHPLIEQFDVFQEKLVLVSQGSDFSVDDFATRPLLVYKKGCGYRGRLETWLKMEGIIPKRIMEFGTFETIIGSVAAGIGMTVFPESSISGLVAQGLVCGHAIPEPYNEVTTVFIRRKEAFVTSTLQSFIDEITTQTEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAX3</accession>
    <name>E3EAX3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373572.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5099"/>
    <dbReference type="EnsemblBacteria" id="ADO59037">
        <property type="protein sequence ID" value="ADO59037"/>
        <property type="gene ID" value="PPSC2_23920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5061"/>
    <dbReference type="eggNOG" id="ENOG50305Z1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2436613_0_0_9"/>
    <dbReference type="OMA" id="RAVQQCE"/>
    <dbReference type="OrthoDB" id="2024076at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036689">
        <property type="entry name" value="ESAT-6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010310">
        <property type="entry name" value="T7SS_ESAT-6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06013">
        <property type="entry name" value="WXG100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140453">
        <property type="entry name" value="SSF140453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="8"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="98" mass="12009" checksum="DD74DC7C313B77F1" modified="2011-01-11" version="1">MSRISLSLGDLRRAVQQCEQLRQRLQHQEQQMKNIYSRLQDWRGESAAELTRKMEAFLQGTTLRIHELDEHKEQLKRYIRKMEEADRREEKRKRAAQW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB84</accession>
    <name>E3EB84_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58416.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4467"/>
    <dbReference type="EnsemblBacteria" id="ADO58416">
        <property type="protein sequence ID" value="ADO58416"/>
        <property type="gene ID" value="PPSC2_20865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4450"/>
    <dbReference type="eggNOG" id="ENOG502ZVEX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_905398_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168724" evidence="1">
        <location>
            <begin position="23"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58416.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="34198" checksum="E9432BF5F9F60985" modified="2015-05-27" version="2">MKKRLIGSIVAAIIMIPTAAFAAPPLIEMITRTPMTAKQVKMDAVGQAALEKLYRSYPETKSFEIIDASQIGGDPTNTSQGKAIQTSIVLQEKGAHGKKVRLDLNGITGEIEQVNQENWEPQEKPVNSLSDQEIKSKVDDLINKLYGSSSKYECNMEPMQTPDQKTFILNYTEKGSTTPFYQAFVQGNTISVSLIGGGPAPSVEGFFMTNGKPDYTADAFLNDEELFSLLHMSPADLKEELAKGASVVEIAASKKISKQQVMDVIASTQAKKQIQADPHGGATVDDRTLELLKRILEPKVLKVIEHKTETPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF7</accession>
    <name>E3EBF7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvaM</name>
        <name evidence="2" type="ORF">PPSC2_21965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373197.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09115"/>
    <dbReference type="EnsemblBacteria" id="ADO58631">
        <property type="protein sequence ID" value="ADO58631"/>
        <property type="gene ID" value="PPSC2_21965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4672"/>
    <dbReference type="eggNOG" id="COG2267">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_50_1_9"/>
    <dbReference type="OMA" id="YSLHYNC"/>
    <dbReference type="OrthoDB" id="1196738at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="34"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="29443" checksum="711801DF718BBF14" modified="2011-01-11" version="1">MTTTSINGYSMHYIDSGEGMTILFIHPPVLTSLNFTYQIQGLSPDFRTVAFDIRGHGKSQPSEQTVTYPLIAQDIKHLMDRLSLDKVFLCGYSTGGSIVLEFLLTYPDRAWGGIVISGMSEVNDWRLRNKISWGTALSKIGAVGTIALSIAWSQTKQLSLFRKLFNDAKQSHPGNVEQYYRYSLKYNCTSRLGEIHLPVLLVYGEEDKHFHPYANILHQQLPKSELVFIKKADHRLPTKAAGTLNELIKQFIDRFSENNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBY7</accession>
    <name>E3EBY7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Arabinanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yxiA5</name>
        <name evidence="8" type="ORF">PPSC2_24245</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 43 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59111.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324880.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11765"/>
    <dbReference type="EnsemblBacteria" id="ADO59111">
        <property type="protein sequence ID" value="ADO59111"/>
        <property type="gene ID" value="PPSC2_24245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5134"/>
    <dbReference type="eggNOG" id="COG3507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009397_1_1_9"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032291">
        <property type="entry name" value="Abn2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006710">
        <property type="entry name" value="Glyco_hydro_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16369">
        <property type="entry name" value="GH43_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04616">
        <property type="entry name" value="Glyco_hydro_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168345" evidence="6">
        <location>
            <begin position="35"/>
            <end position="849"/>
        </location>
    </feature>
    <feature type="domain" description="GH43_C" evidence="7">
        <location>
            <begin position="443"/>
            <end position="546"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity, responsible for pKa modulation of the active site Glu and correct orientation of both the proton donor and substrate" evidence="5">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59111.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="849" mass="92737" checksum="A7E57B6DC6DAC404" modified="2015-05-27" version="2">MMRSFIKRRARSSIALTMTLLLAIAAVPSGTMDAATADPNQNNKQNVPTFSNVSVHDPSIVKDGDTYYVFGSHISAAKSKDLTNWTSSANGYTTPGNTLYGDLSKNLAGSFAWAGENDADSKGGFSVWAPDVFWNEHYVNKDGSKGAYMIYYSASSTYIRSAIGIAVAPNIEGPYQYVDTIVNTGFTKETAFDKDSKVDKKWTNTPISQLINEGKLKGPRAGWFNADGSYANRVFPNAIDAAVFYDTDGRLWMTYGSWSGGIFLLELDKATGKPIYPGQDGTTEDGRLIDRYFGTKIAGGYGESGEGPYIEYNSKTGYYYLYVTYGGLASDGGYNMRLFRSKSPTGPYKDAKGQNAVLPANTKNVAYGNKLMGNFLFDSKIGDPGTGVGYGYVSPGHNSVYTDPATGQMFVVFHTRFPQQGETHELRVHQMFMNQDDWPVVAPYRYGGETLTKLDEKQFIGDYQYINHGSDSSATIKNTQFIQLRADHTIKGDVQGTWRKSGDANVQLTLDGAVYDGVFLRQWDQVTNQYILAFTVLSNKGEMAWGSKLPDMTDTTVVDSVYRELDLGNTSRVTANLTLPKEGSRQSSITWKTSDPGIISDTGEIKRPGIGEKAVSATLTATITKGDSSRDKAFNITVAPYEKATLTASYPFENNLKDQNDAFAKGKVIGDRIDRQGGSISYAEGVRGQAVVLDGQSGIALPEGLISSSAYSVSLWVKPSELTVHTPTFFGAMDSNHWVSLLPRGPEKDNTMVWSGSSTWYTGSTGLKIKTNEWTHLAFTVDHGVLEVYVNGKIHFTGSGFSDVFTSKSGTFSLGVNWWDPAFKGSMDELSIFEGALPPAQVEELAQMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC35</accession>
    <name>E3EC35_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">rpsF</name>
        <name evidence="6" type="ORF">PPSC2_25435</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Binds together with S18 to 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bS6 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007433230.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12930"/>
    <dbReference type="EnsemblBacteria" id="ADO59375">
        <property type="protein sequence ID" value="ADO59375"/>
        <property type="gene ID" value="PPSC2_25435"/>
    </dbReference>
    <dbReference type="GeneID" id="66574981"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5390"/>
    <dbReference type="eggNOG" id="COG0360">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113441_5_3_9"/>
    <dbReference type="OMA" id="ITEASPM"/>
    <dbReference type="OrthoDB" id="1776954at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00473">
        <property type="entry name" value="bS6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00360">
        <property type="entry name" value="Ribosomal_S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000529">
        <property type="entry name" value="Ribosomal_S6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020814">
        <property type="entry name" value="Ribosomal_S6_plastid/chlpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035980">
        <property type="entry name" value="Ribosomal_S6_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014717">
        <property type="entry name" value="Transl_elong_EF1B/ribosomal_S6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21011">
        <property type="entry name" value="PTHR21011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01250">
        <property type="entry name" value="Ribosomal_S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54995">
        <property type="entry name" value="SSF54995"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00166">
        <property type="entry name" value="S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="10808" checksum="B138562094763633" modified="2011-01-11" version="1">MRKYEVMYIIRPDIEQEAVQATVDKFQGIISNGGGEITNHDVTKRRLAYEIKKFRDGSFVLVNFTAEPAVVTELERIMKISDEVIRYLITNDVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC81</accession>
    <name>E3EC81_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YxbB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yxbB</name>
        <name evidence="2" type="ORF">PPSC2_01200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368867.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0237"/>
    <dbReference type="EnsemblBacteria" id="ADO54224">
        <property type="protein sequence ID" value="ADO54224"/>
        <property type="gene ID" value="PPSC2_01200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.229"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1136276_0_0_9"/>
    <dbReference type="OMA" id="IFAPIYP"/>
    <dbReference type="OrthoDB" id="1664438at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="42"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="26961" checksum="6DE6690775C6A068" modified="2011-01-11" version="1">MITAEECQTYNKFIKKYQPHLYPLLGAHISRLYERKGGVVIDMGTGPGYLTVELAERLKANVHAVDINPAMHDLARRLVEERGLSKSVHFDVIDVHNQIYPDNYADLVVSYSCLHHWENPVRALLECYRVLSPNGLLIIIDTLPNNKDTLNALKRSIPEPEYFRFIREAFEESYSMSKIEEMIHEAGIVDFELNLFKFNEEDIADCIEVLEDLHIPEVEAEANTENWILTACKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECC2</accession>
    <name>E3ECC2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">M1-418</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">M1-418</name>
        <name evidence="8" type="ORF">PPSC2_01390</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54265.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14110"/>
    <dbReference type="EnsemblBacteria" id="ADO54265">
        <property type="protein sequence ID" value="ADO54265"/>
        <property type="gene ID" value="PPSC2_01390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.275"/>
    <dbReference type="eggNOG" id="COG1714">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_749740_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010432">
        <property type="entry name" value="RDD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06271">
        <property type="entry name" value="RDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="134"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="RDD" evidence="7">
        <location>
            <begin position="44"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF06271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54265.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="41315" checksum="A37076FB38B14D24" modified="2015-05-27" version="2">MEEHNLSKNPSTVAPGEFVRNGGYQRREPDRMAVLSETYGASIFFRRWAAWMIDFILIVFGYGGLVYFIAKKVAEAEIPNMGMVVILFLIGSFCYYLLLEGLTGYTLGKFVLRIQVVNGEGMPPGMIKSLIRTLIHLVDTNPLLFWGLPAGICVLVTPRKQRIGDMAANTYVVRTRDLGKVSKKKTGIIAGAIILMTITSIVFAVSLISTLITQIVKPEVFTSKDNQFAVTAPWNWSRDNRINEEADISIKNEFTDRYLIVLSEPKSDFDSSMTLQEYKGIIEDHLVSGITDPELGTASDMVVNGYPAIEFTLKGEIDGNLAMYNVTTIETPSHYHQVLAWTYASRYSRAQQELRKIRDSFREMNMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECE0</accession>
    <name>E3ECE0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ybfA1</name>
        <name evidence="3" type="ORF">PPSC2_01475</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO54283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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        <property type="protein sequence ID" value="ADO54283"/>
        <property type="gene ID" value="PPSC2_01475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.292"/>
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        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065219_0_0_9"/>
    <dbReference type="OMA" id="NEHIYDS"/>
    <dbReference type="OrthoDB" id="1823496at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
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        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="N-acetyltransferase" evidence="2">
        <location>
            <begin position="153"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="36395" checksum="2171228069B402B0" modified="2011-01-11" version="1">MNSTYTSIVHSIRKFNRFYTNVLGLLEQYLLDSEFSLSEARVLYELNNIENCTSKKLIEALRMDSGYLSRMMKRFEAFNLTYKVRSAEDGRLYFLYLTDKGRETLARLDALSDQQISQMVDKLQVHNQKKLVEGMEMIESALTDNPVSTEEKISIRSEIRAGDIGYLIYLHGWIYAKECGYNHVFEGYVCKTFYEFLENYSPEKDRIWLAEANGIIIGAIAIIGHTSEKAQLRWFILHPDFRGMGLGKRLLSQATQYCREKGYRQVYLETTEDQKHAIHMYTQAGFRFKKEYRSSAWGVDHVELTYEWNLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECE7</accession>
    <name>E3ECE7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Beta-phosphoglucomutase</fullName>
            <ecNumber evidence="5">5.4.2.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pgmB</name>
        <name evidence="5" type="ORF">PPSC2_01515</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="3">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.6" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54290.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599390.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14210"/>
    <dbReference type="EnsemblBacteria" id="ADO54290">
        <property type="protein sequence ID" value="ADO54290"/>
        <property type="gene ID" value="PPSC2_01515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.300"/>
    <dbReference type="eggNOG" id="COG0637">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_13_3_9"/>
    <dbReference type="OrthoDB" id="1167152at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008801">
        <property type="term" value="F:beta-phosphoglucomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02598">
        <property type="entry name" value="HAD_BPGM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010976">
        <property type="entry name" value="B-phosphoglucomutase_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010972">
        <property type="entry name" value="Beta-phosphoglucomutase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01990">
        <property type="entry name" value="bPGM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02009">
        <property type="entry name" value="PGMB-YQAB-SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="7"/>
            <end position="9"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="42"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="114"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="7"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="9"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="7"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="9"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="23"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity and assists the phosphoryl transfer reaction to Asp8 by balancing charge and orienting the reacting groups" evidence="4">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity and assists the phosphoryl transfer reaction to Asp8 by balancing charge and orienting the reacting groups" evidence="4">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR610972-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR610972-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR610972-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR610972-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54290.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="23791" checksum="983099AEA245A095" modified="2015-05-27" version="2">MKAVIFDLDGVITDTAEYHFQAWGSLAAALSIPFDREFNEQLKGISRTESLDKILARGNLSNTLSEEGKQELAIQKNTEYQRLISALTPSDVLPGIQALLKELREARVGIALASASKNAAFILDRLELAHYFDSVVDVTAIRHGKPDPEIFLAGAANLGVQPADCIGIEDAQAGIQAIKGAGMFAVGVGTPSQMQGADIVVATTAELSLSMLEEHFYEFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECG8</accession>
    <name>E3ECG8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">M1-465</name>
        <name evidence="7" type="ORF">PPSC2_01605</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368953.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14370"/>
    <dbReference type="EnsemblBacteria" id="ADO54311">
        <property type="protein sequence ID" value="ADO54311"/>
        <property type="gene ID" value="PPSC2_01605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.321"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_2_9"/>
    <dbReference type="OMA" id="WLFTAVI"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
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        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="151"/>
            <end position="179"/>
        </location>
    </feature>
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        <location>
            <begin position="200"/>
            <end position="225"/>
        </location>
    </feature>
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        <location>
            <begin position="261"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="67"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="32844" checksum="CA334353229C03A2" modified="2011-01-11" version="1">MQKKHQALWGYLFIGPQFLGLLCFSLLPLLYAFYLSFVNWDGFGVPLFVGLDNFKGQLSDPDFWKALINTVYYMVLVIPVGIVLALLVAIVLNKVKGREIYRLFFFMPVVTSSVSVGVIWMWILNGEFGILNHLLRAIGITGPMWLTDTHWVIPSIALLSIWLGLGYNMVIFLAGLQGISKSYYEAAEIDGASKFQQLRYITLPLLSPTTFFVTIMMVISSFQVFDQAFVMTNGGPAKASYTLVYHIYDQAFIDFTMGESAAAAMILFVIILIFTLLQFKMQKRWVHYGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECU3</accession>
    <name>E3ECU3_PAEPS</name>
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        <submittedName>
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        </submittedName>
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        <name evidence="2" type="ORF">PPSC2_02100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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        <property type="gene ID" value="PPSC2_02100"/>
    </dbReference>
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        <property type="component" value="Chromosome"/>
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        <property type="entry name" value="SBP"/>
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        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
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        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169090" evidence="1">
        <location>
            <begin position="31"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="443" mass="48029" checksum="71F78B0102D48D39" modified="2011-01-11" version="1">MSRIKMKAFAVVAAGALALTLAACNNGQSAGPGNSGEKGGGNVTKDVTITFQNINPDPSTPSYKMIKQIVSQYEQDHPHVKIELDSLNTDQQKLKLKTQAAAKEVPDITIVNPAAQMKPFVDAGLLAPLNDVADKEGLKDTFQDGLLNYYSFDDKLYAFPDGNNIEVVFYNKELFEQAGIQKLPTTFDELITTVKTLKAKGITPIAIGEKDSWTGSLLFMNILLRTNEGPNFLNDVLDGKKTFNDPAFVEAVDAFQELVQAGAFPDGATSIDYNAGGNIFKTRKAAMYIMGTWETGSIDASPVAGKVGAFQFPTVNGKGNVNEYVIAPGSAFAVSANSEHLQETKDFLHYFITEMPKIQFDLKNAIGSGQKMKGDLKEAGYSELAISLNELFKNVKGGDLAFDNTMNPAIAQAHLSSIQNLFVQQEDSAQVAKEHQNTFEANK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDG8</accession>
    <name>E3EDG8_PAEPS</name>
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        <submittedName>
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        </submittedName>
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        <name evidence="2" type="primary">ykoE3</name>
        <name evidence="2" type="ORF">PPSC2_04730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
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    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO54947">
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="ABC_thiamin-permease_prd"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
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            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
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        </location>
    </feature>
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        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="155"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54947.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="198" mass="21753" checksum="5D9F31280923E897" modified="2015-05-27" version="2">MNTNVRASKGLKLTDILVTIVISVVFGLVYKIWGPAYDLMKPFGMHAEQLMYGMWFMAGTFAYLIIRKPGVAILAEVAAATVSAFLGSEWGMSTLYYGLLQGLGAELFFAIFLYRNANLWIASLAAAGAAVTSLILDFSYGYIDQLSTWNYVLYIGFRMIGSIVIAGIFAFYLAKALEVTGVTRSLRPATEQDYKGLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDP4</accession>
    <name>E3EDP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yxeH</name>
        <name evidence="1" type="ORF">PPSC2_06610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19575"/>
    <dbReference type="EnsemblBacteria" id="ADO55352">
        <property type="protein sequence ID" value="ADO55352"/>
        <property type="gene ID" value="PPSC2_06610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1361"/>
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        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044146_0_3_9"/>
    <dbReference type="OMA" id="IITYQGA"/>
    <dbReference type="OrthoDB" id="1374424at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR000150">
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    </dbReference>
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        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
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    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00099">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="30024" checksum="00F839BDBA6E01EB" modified="2011-01-11" version="1">MYKLIAIDIDDTLINDQKEVTPATQQALEAAVAKGVVVTLATGRAYASAHKIARQTGLNVPIITYQGALVKNLLDENVLYERYVPLVAARRLYEFCVERNLHLQTYIDDKLYTREDNQKIKDYTELNNTEYFVEPVFSKVIEQPAPKLLIIDEPEVLDELIPELRELLGNEVHITKSKPHFLEIMHHEGTKGHALAFLANHFGCDLSETIAIGDSWNDHEMLECAGLGIAMENAIPDLKKLADYITRSNNEDGVKHAIDKFVLNVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS7</accession>
    <name>E3EDS7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YqbO1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yqbO1</name>
        <name evidence="1" type="ORF">PPSC2_00025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007433255.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13040"/>
    <dbReference type="EnsemblBacteria" id="ADO53993">
        <property type="protein sequence ID" value="ADO53993"/>
        <property type="gene ID" value="PPSC2_00025"/>
    </dbReference>
    <dbReference type="GeneID" id="66574959"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5"/>
    <dbReference type="eggNOG" id="ENOG5032Y6E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_173118_2_0_9"/>
    <dbReference type="OMA" id="MFIHLGG"/>
    <dbReference type="OrthoDB" id="2054164at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007169">
        <property type="entry name" value="RemA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04025">
        <property type="entry name" value="DUF370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO53993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="9356" checksum="4B99CE1E1A4F9AC4" modified="2011-01-11" version="1">MYIHLGGEKIIRSSELVAIFDISIEKSSKISKQYVNHAQQQKHVEMIGEEEAKSIVVTQNTVYYSPISSTTLKKRANQFVANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE65</accession>
    <name>E3EE65_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yceF</name>
        <name evidence="2" type="ORF">PPSC2_04925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369621.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17820"/>
    <dbReference type="EnsemblBacteria" id="ADO54988">
        <property type="protein sequence ID" value="ADO54988"/>
        <property type="gene ID" value="PPSC2_04925"/>
    </dbReference>
    <dbReference type="GeneID" id="66573975"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.992"/>
    <dbReference type="eggNOG" id="COG0861">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070543_1_1_9"/>
    <dbReference type="OMA" id="IMFLDIV"/>
    <dbReference type="OrthoDB" id="1917125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022493">
        <property type="entry name" value="CHP03716_TM_YkoY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005496">
        <property type="entry name" value="Integral_membrane_TerC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03741">
        <property type="entry name" value="TerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03716">
        <property type="entry name" value="R_switched_YkoY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="191"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="216"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="26908" checksum="B75DBE90AF48BC50" modified="2011-01-11" version="1">MLNDLFKNISENYGHFFSWSDVVGTLTDPVSWGIIGTLILLEGLLSADNALVLAVMVKHLPKEQQKRALFYGILGAYIFRFLAIGLGTFLIKFTLIKVLGAAYLLYIAYKGLFKSEGDGEVKNKPTSFWKTVLMVELMDIAFSIDSVIAAFGVSEKVWVLFLGGILGVLMMRGVAQVFLKLIDKFPELEQTAFIMIAIIGGKMLAAAFGFHMSQVLFFGILIAVFVGTMILSSAKRKKKADKEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EED0</accession>
    <name>E3EED0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">S-adenosylmethionine decarboxylase proenzyme</fullName>
            <shortName evidence="10">AdoMetDC</shortName>
            <shortName evidence="10">SAMDC</shortName>
            <ecNumber evidence="10">4.1.1.50</ecNumber>
        </recommendedName>
        <component>
            <recommendedName>
                <fullName evidence="10">S-adenosylmethionine decarboxylase beta chain</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="10">S-adenosylmethionine decarboxylase alpha chain</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="10" type="primary">speD</name>
        <name evidence="11" type="synonym">speD1</name>
        <name evidence="11" type="ORF">PPSC2_06745</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>H(+) + S-adenosyl-L-methionine = CO2 + S-adenosyl 3-(methylsulfanyl)propylamine</text>
            <dbReference type="Rhea" id="RHEA:15981"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57443"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="4.1.1.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </cofactor>
        <text evidence="10">Binds 1 pyruvoyl group covalently per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="10">Amine and polyamine biosynthesis; S-adenosylmethioninamine biosynthesis; S-adenosylmethioninamine from S-adenosyl-L-methionine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Heterooctamer of four alpha and four beta chains arranged as a tetramer of alpha/beta heterodimers.</text>
    </comment>
    <comment type="PTM">
        <text evidence="10">Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.50" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370012.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19710"/>
    <dbReference type="EnsemblBacteria" id="ADO55381">
        <property type="protein sequence ID" value="ADO55381"/>
        <property type="gene ID" value="PPSC2_06745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1388"/>
    <dbReference type="eggNOG" id="COG1586">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092007_0_0_9"/>
    <dbReference type="OMA" id="HVTVHTY"/>
    <dbReference type="OrthoDB" id="757383at2"/>
    <dbReference type="UniPathway" id="UPA00331">
        <property type="reaction ID" value="UER00451"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004014">
        <property type="term" value="F:adenosylmethionine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006557">
        <property type="term" value="P:S-adenosylmethioninamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008295">
        <property type="term" value="P:spermidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00465">
        <property type="entry name" value="AdoMetDC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003826">
        <property type="entry name" value="AdoMetDC_fam_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009165">
        <property type="entry name" value="S-AdoMet_deCO2ase_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016067">
        <property type="entry name" value="S-AdoMet_deCO2ase_core"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33866">
        <property type="entry name" value="PTHR33866"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02675">
        <property type="entry name" value="AdoMet_dc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001356">
        <property type="entry name" value="SAM_decarboxylas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56276">
        <property type="entry name" value="SSF56276"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03331">
        <property type="entry name" value="SAM_DCase_Eco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 10" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="2 10" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="7 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 10" id="KW-0620">Polyamine biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 10" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="8 10" id="KW-0704">Schiff base</keyword>
    <keyword evidence="4 10" id="KW-0745">Spermidine biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0865">Zymogen</keyword>
    <feature type="chain" id="PRO_5023265262" description="S-adenosylmethionine decarboxylase beta chain" evidence="10">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5023265263" description="S-adenosylmethionine decarboxylase alpha chain" evidence="10">
        <location>
            <begin position="118"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate; via pyruvic acid" evidence="10">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for processing activity" evidence="10">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor; for catalytic activity" evidence="10">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage (non-hydrolytic); by autolysis" evidence="10">
        <location>
            <begin position="117"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="modified residue" description="Pyruvic acid (Ser); by autocatalysis" evidence="10">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="30947" checksum="ABFA2647DB312CC9" modified="2011-01-11" version="1">MTITPEQRITLHGFNNLTKSLSFNMYDICYTKTKEEREAYIEYIDEQYNSDRLTAILKNVSDIIGAHVLNVAQQDYVPQGASVTVLISEGPIVEVPNESYTESPGPLPESVVIQLDKSHITVHTYPEYHPDEGISTFRADIDVSTCGEISPLKALHYLTHSFDTDIMTIDYRVRGFTRDTNGHKLFIDHDIASIQNYIPDEVRNQYDMIDVNVYQENIFHTKCKLKQFDLDNYLFGYTKESLSEKEQQNISTRLKIEMDEIYYGKNMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEG6</accession>
    <name>E3EEG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370048.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19870"/>
    <dbReference type="EnsemblBacteria" id="ADO55417">
        <property type="protein sequence ID" value="ADO55417"/>
        <property type="gene ID" value="PPSC2_06900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1423"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_3_0_9"/>
    <dbReference type="OMA" id="IRAPQWG"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="34"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="22437" checksum="38970C0C96B90F81" modified="2011-01-11" version="1">MSREQQPNPILLSFPEQFQTERLTIRAPQWGDGAAVNEAIRESVHELRPWLPFARNLPTVEESEIRSRQARLKFLDRSDMVLYVFDTASGQFVASSGLHRMNWDARRFEIGYWLRTSWTGKGIITEAVHGVTDFAIQHLHANRLEILCDSRNTRSAKVAERAGFTLEGILRNVECDEEGNMVHHMVFAKVRGIEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EET2</accession>
    <name>E3EET2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_09610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370624.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2035"/>
    <dbReference type="EnsemblBacteria" id="ADO56007">
        <property type="protein sequence ID" value="ADO56007"/>
        <property type="gene ID" value="PPSC2_09610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2025"/>
    <dbReference type="eggNOG" id="ENOG503481K">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113335_0_0_9"/>
    <dbReference type="OMA" id="IMTVTGY"/>
    <dbReference type="OrthoDB" id="1334131at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="185"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="23911" checksum="0A6705C29D1F936E" modified="2011-01-11" version="1">MLLEPLGFLFFSTLEGVAVFALILSIFKVRMTPYLWQAIFVNLIMNLQSYLLREEFSLSYVVPVINMLLFIFLLATVVKIPIVWSGIMTVTGYFAYAVIQSVLLKAMFGNLPISELQNGSLKGYLLQVVSAATGLLISFILYRKEIGFSPNFKKLKFKEEYGIVITLIILSLISTSIVLYYSEVWLSMIFFALVSGFFIYYAVGKEYRDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEU4</accession>
    <name>E3EEU4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Enoyl-[acyl-carrier-protein] reductase [NADH]</fullName>
            <ecNumber evidence="6">1.3.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fusG</name>
        <name evidence="10" type="ORF">PPSC2_00385</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 2,3-saturated acyl-[ACP] + NAD(+) = a (2E)-enoyl-[ACP] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:10240"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9926"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78785"/>
            <dbReference type="EC" id="1.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Lipid metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.9" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368713.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13400"/>
    <dbReference type="EnsemblBacteria" id="ADO54067">
        <property type="protein sequence ID" value="ADO54067"/>
        <property type="gene ID" value="PPSC2_00385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.77"/>
    <dbReference type="eggNOG" id="COG0623">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_10_1_9"/>
    <dbReference type="OMA" id="GILDMIH"/>
    <dbReference type="OrthoDB" id="762291at2"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00058"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004318">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016631">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05372">
        <property type="entry name" value="ENR_SDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014358">
        <property type="entry name" value="Enoyl-ACP_Rdtase_NADH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43159">
        <property type="entry name" value="PTHR43159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000094">
        <property type="entry name" value="Enoyl-ACP_rdct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="5 6" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="6" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4 6 9" id="KW-0520">NAD</keyword>
    <keyword evidence="3 6 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="20"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="192"/>
            <end position="196"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="256" mass="27691" checksum="5B0636E08DBDA1C6" modified="2011-01-11" version="1">MAVLLSGKNILIMGVANNRSIAWGTAQSLAAEGANLIFTYENERVAERVLKLAETIPGSIVCPCNVQSDEELDALTDFLKEKVGVLHGYFHSVAFAKAEDLEGLFVDTSREGFAIAQEISAYSLAAVSRRVYPLMTEGGSIVTMTYIGAERAIKNYNIMGVAKASLEASMRYLSNDLGTYGIRVNAISAGPIRTLAAYGIKDFNTMLKHIEETTPLRKTVDTSEVGDTALFLFSHLSRGITGEVIHVDAGYHITGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEU5</accession>
    <name>E3EEU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptide synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fusF</name>
        <name evidence="3" type="ORF">PPSC2_00390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368714.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13405"/>
    <dbReference type="EnsemblBacteria" id="ADO54068">
        <property type="protein sequence ID" value="ADO54068"/>
        <property type="gene ID" value="PPSC2_00390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.78"/>
    <dbReference type="eggNOG" id="COG0318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_59_0_9"/>
    <dbReference type="OMA" id="TSARMAY"/>
    <dbReference type="OrthoDB" id="961884at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="20"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="486" mass="54128" checksum="A1F997593FB1A7F3" modified="2011-01-11" version="1">MLITHTDCRIISPEGIMSRERLERDVAIFSRMLTLRGIPEDGRVILKAANSYWFVVSLFSLCHLAVSVTVVDEQTVIDEVAQIYDEAGACCILTDSDLELPHALVILIQDLIQEEAVHPYWVGEPKSEALDFNKWCERSDALILYSSGTTGKPKGIVKAGSAFMENIRHSIHAMNYIPSDHMLPVVPFSHFYGVSLIFSWWLTSCSLIICNPKNLWSVIASITKDRATVVDANPSAFYTLLRMLSRKPEQLELIKQSPVRMWCVGGSPLTQDLEEKFNNIFGQPLLNGYGLSELGNVTLGTLDCPKGCGKPLPGVDLKILDSTGNQQADGIVGEVWIRSAGCMEGYLNRPDLTQSVLQDGWFKTGDLGYLDDGMLYVIGRSGKTVNRMGYMVSPVYIEDRIGSLGYRSCVITLEDEAKGTLLVAFIESESPQVLPVLRKEMNRVLPSYMFPDLLLPLDHFPLNRNGKVDRLEMERTALEKAASRKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFH7</accession>
    <name>E3EFH7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA repair protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">myH2</name>
        <name evidence="3" type="ORF">PPSC2_07140</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370095.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1490"/>
    <dbReference type="EnsemblBacteria" id="ADO55468">
        <property type="protein sequence ID" value="ADO55468"/>
        <property type="gene ID" value="PPSC2_07140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1475"/>
    <dbReference type="eggNOG" id="COG3027">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014240_0_0_9"/>
    <dbReference type="OMA" id="RQFEEYA"/>
    <dbReference type="OrthoDB" id="1543353at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036192">
        <property type="entry name" value="Cell_div_ZapA-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102829">
        <property type="entry name" value="SSF102829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="150"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="309"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="502"/>
            <end position="669"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="316"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="674" mass="77937" checksum="A22E7C35C1B44ED2" modified="2011-01-11" version="1">MTTPDRTRVTVEIYGTSYKLVGSNSDYMKQVANYVDERMHSISQAHSRLDMPRIAVLAAVHMAEEAVQIQEIQSHMNRLAAERAELRGDLAQLQTALGEQQQKNTDMHQALVQLREEKETTQKKLVETESASAKEIAELRAKLEQQEKKAAELENAQKQAKRELEESRQEASRKLKEQQEAANARVRQTEEQLKKEIAEAAKQAEAKLSAAEKAHQERNRTELDKLRSALQQEHSQKISEWQIKCSGLNEQLEQERKQAELALNEQKLQHEEAQKRAEEAALEQEIRMEELQEQLEQVQAGSAELSSRLKEAQEQAAALEQQQSELEAELQAQQQAATEREQADTLAREELQSRYDQLLDEAKATQQQAAKLEEEQRRMQKLLEQAHVSSRKLQSELATLAESEKSWKKLAEERQLAADELELSLLEAREQKEAIEQQLQQTVTEVEAANDKYASQQQRLVQLEAKIKELSPELIRVQDELEKAKVREQEGAKAYQSLQEQYGSMKSRAGQLEQHIKQLQQENHDRQSKLERAEKASMEWQLKYDQLKDEAERLEAEDAARKEEFASWEREIAVTIEQKEQLQEEIRSAVEAANTAKAEQQSIEQERMALQSELDEVGQKYEMAAHQLRLLQVQQDVDRENAEKISTELRQLKEEYTKLQTEYNEWIELIEQDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFL8</accession>
    <name>E3EFL8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphoserine aminotransferase</fullName>
            <ecNumber evidence="6">2.6.1.52</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Phosphohydroxythreonine aminotransferase</fullName>
            <shortName evidence="6">PSAT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">serC</name>
        <name evidence="9" type="ORF">PPSC2_07330</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>2-oxoglutarate + 4-(phosphooxy)-L-threonine = (R)-3-hydroxy-2-oxo-4-phosphooxybutanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:16573"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58452"/>
            <dbReference type="ChEBI" id="CHEBI:58538"/>
            <dbReference type="EC" id="2.6.1.52"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 6 7">
            <text>2-oxoglutarate + O-phospho-L-serine = 3-phosphooxypyruvate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:14329"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:18110"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57524"/>
            <dbReference type="EC" id="2.6.1.52"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
        <text evidence="6">Binds 1 pyridoxal phosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 6 7">Amino-acid biosynthesis; L-serine biosynthesis; L-serine from 3-phospho-D-glycerate: step 2/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 6">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.52" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55509.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20310"/>
    <dbReference type="EnsemblBacteria" id="ADO55509">
        <property type="protein sequence ID" value="ADO55509"/>
        <property type="gene ID" value="PPSC2_07330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1515"/>
    <dbReference type="eggNOG" id="COG1932">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034866_0_2_9"/>
    <dbReference type="UniPathway" id="UPA00135">
        <property type="reaction ID" value="UER00197"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004648">
        <property type="term" value="F:O-phospho-L-serine:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006564">
        <property type="term" value="P:L-serine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00611">
        <property type="entry name" value="PSAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00160">
        <property type="entry name" value="SerC_aminotrans_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022278">
        <property type="entry name" value="Pser_aminoTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43247">
        <property type="entry name" value="PTHR43247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000525">
        <property type="entry name" value="SerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01364">
        <property type="entry name" value="serC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0718">Serine biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="8">
        <location>
            <begin position="6"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="6">
        <location>
            <begin position="77"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="6">
        <location>
            <begin position="238"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>L-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="153"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="6">
        <location>
            <position position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55509.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="362" mass="40132" checksum="DAA32A83E6AC335C" modified="2015-05-27" version="2">MSKRAYNFNAGPAALPLKVLERVQAEFVDFQGTGMSIMEMSHRGAVYESVHNEAQERLLSLLGNPQGYKVLFLQGGASTQFAMLPLNFLSEEQIGSYVMTGSWSDKAYKEAKLLGKAHIAASSADEKYMRLPNVDSLDLPENTAYVHMTSNETIEGTQFKQFPDTGSVPLIVDMSSDIFCKPFDVTQFGLIYAGAQKNLGPSGVTVVVAREELLASSPGNIPTMLRYSTYQKNNSLYNTPPSFAIYMVNEVLKWIQEEGGLEGIERVNQQKAALLYDRIDRSEGFYRGCVDSADRSIMNVTFRLANEDLEKQFIKESEQAGFIGLKGHRSVGGLRASIYNAVPLENCQALAEFMDGFKQRNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFR2</accession>
    <name>E3EFR2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55784.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1812"/>
    <dbReference type="EnsemblBacteria" id="ADO55784">
        <property type="protein sequence ID" value="ADO55784"/>
        <property type="gene ID" value="PPSC2_08565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1801"/>
    <dbReference type="HOGENOM" id="CLU_186864_0_0_9"/>
    <dbReference type="OrthoDB" id="1880900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55784.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="7510" checksum="1803BD312C8BD098" modified="2015-05-27" version="2">MDIKVNRRSYQDIHRTYDDLVTTMIRKYQYGDAIDTVSNYAKLETFVLQYEETDRQKESQLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFV6</accession>
    <name>E3EFV6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370447.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55828">
        <property type="protein sequence ID" value="ADO55828"/>
        <property type="gene ID" value="PPSC2_08760"/>
    </dbReference>
    <dbReference type="GeneID" id="66578186"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1846"/>
    <dbReference type="eggNOG" id="ENOG5034BY6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1494851_0_0_9"/>
    <dbReference type="OMA" id="WVYEGRI"/>
    <dbReference type="OrthoDB" id="1142595at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="43"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="22318" checksum="399E0302E5B941B3" modified="2011-01-11" version="1">MPKQQDKHSIQAWSLINRKYLGKGVRVKRFRKPTRCQVRNRVLLAVLMANDIKLSQLAEELSISSRSVSAWVYEGRIPGNTNLEKTCNTLGYPHHILFNEEVVRRSPLICQPSPSRFMKRTVTRSPVKNRILAGLCMVHDISVTDVSHWIGVHPGTFRKWLHQGTVPSQTFQDQAEQFFRIPKSILFADAMLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG09</accession>
    <name>E3EG09_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0102 protein PPSC2_09770</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0102 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370656.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22235"/>
    <dbReference type="EnsemblBacteria" id="ADO56042">
        <property type="protein sequence ID" value="ADO56042"/>
        <property type="gene ID" value="PPSC2_09770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2058"/>
    <dbReference type="eggNOG" id="COG0792">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_115353_2_1_9"/>
    <dbReference type="OMA" id="RNWRCGR"/>
    <dbReference type="OrthoDB" id="2044249at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00048">
        <property type="entry name" value="UPF0102"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003509">
        <property type="entry name" value="UPF0102"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34039">
        <property type="entry name" value="PTHR34039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02021">
        <property type="entry name" value="UPF0102"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00252">
        <property type="entry name" value="TIGR00252"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="14307" checksum="D978FF89F66E776B" modified="2011-01-11" version="1">MGNEMKTRGKDQRKAKGAMGEEAAALFLENLGYRILERNWRCRSGEIDLIAKQEHILVFIEVRSRSSSKYGTPAESVTARKITQVRQTAAVYLHMNGMGESPIRFDMISVRLSAETAVVTDHFIDAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG18</accession>
    <name>E3EG18_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Succinate--CoA ligase [ADP-forming] subunit alpha</fullName>
            <ecNumber evidence="2">6.2.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Succinyl-CoA synthetase subunit alpha</fullName>
            <shortName evidence="2">SCS-alpha</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 7" type="primary">sucD</name>
        <name evidence="7" type="ORF">PPSC2_09810</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 5">Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 5">
            <text>ATP + CoA + succinate = ADP + phosphate + succinyl-CoA</text>
            <dbReference type="Rhea" id="RHEA:17661"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.2.1.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Carbohydrate metabolism; tricarboxylic acid cycle; succinate from succinyl-CoA (ligase route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 5">Heterotetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the succinate/malate CoA ligase alpha subunit family.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.5" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370665.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22280"/>
    <dbReference type="EnsemblBacteria" id="ADO56051">
        <property type="protein sequence ID" value="ADO56051"/>
        <property type="gene ID" value="PPSC2_09810"/>
    </dbReference>
    <dbReference type="GeneID" id="66577953"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2068"/>
    <dbReference type="eggNOG" id="COG0074">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052104_0_0_9"/>
    <dbReference type="OMA" id="VIICITE"/>
    <dbReference type="OrthoDB" id="1081709at2"/>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004775">
        <property type="term" value="F:succinate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01988">
        <property type="entry name" value="Succ_CoA_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017440">
        <property type="entry name" value="Cit_synth/succinyl-CoA_lig_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033847">
        <property type="entry name" value="Citrt_syn/SCS-alpha_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005810">
        <property type="entry name" value="CoA_lig_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005811">
        <property type="entry name" value="CoA_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02629">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00549">
        <property type="entry name" value="Ligase_CoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001553">
        <property type="entry name" value="SucCS_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01019">
        <property type="entry name" value="sucCoAalpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01216">
        <property type="entry name" value="SUCCINYL_COA_LIG_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00399">
        <property type="entry name" value="SUCCINYL_COA_LIG_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0436">Ligase</keyword>
    <keyword evidence="1 2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="CoA_binding" evidence="6">
        <location>
            <begin position="4"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Coenzyme A binding" evidence="2">
        <location>
            <begin position="17"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Coenzyme A binding" evidence="2">
        <location>
            <begin position="105"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="2 3">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>substrate</name>
            <note>ligand shared with subunit beta</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001553-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="32058" checksum="40E31C2D556A166C" modified="2011-01-11" version="1">MSILVDKHTKVITQGITGKTALFHAKGALDYGTQMVGGTSPGKGGTEVEITLENGQQVKLPVFNTVSEAKEATGATASVIYVPPAFAADSILEAVDAELDLVICITEGIPVLDMIKVKRFMEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGIGQSSAVGIGGDPVKGSEFIDILHRFNEDPNTHAVIMIGEIGGTAEEEAAEWIRDNMTKPVVGFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIATLEACGIKVAPTPSEMGSTLVSVLEARGILNLCTTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG68</accession>
    <name>E3EG68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370867.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2289"/>
    <dbReference type="EnsemblBacteria" id="ADO56261">
        <property type="protein sequence ID" value="ADO56261"/>
        <property type="gene ID" value="PPSC2_10755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2278"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_21_0_9"/>
    <dbReference type="OMA" id="KIEMLFI"/>
    <dbReference type="OrthoDB" id="1390922at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="6"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="17309" checksum="913B9F5930E8B58E" modified="2011-01-11" version="1">MQHKIIAYREENHDQLVDIWHRAVRQTHTFLSEEDIQFYHHIISNGALRELEVWMECTVLQEPIGFIGLDGQKIEMLFVDPEWHGQGTGSRLIQHAEKIKGTHLKVDVNEQNEKAHAFYRHYGFVPTGRSALDGSRRAFPLLHMELNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGC5</accession>
    <name>E3EGC5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 15">ATP phosphoribosyltransferase</fullName>
            <shortName evidence="15">ATP-PRT</shortName>
            <shortName evidence="15">ATP-PRTase</shortName>
            <ecNumber evidence="6 15">2.4.2.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15 17" type="primary">hisG</name>
        <name evidence="17" type="ORF">PPSC2_00850</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14 15">Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>1-(5-phospho-beta-D-ribosyl)-ATP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + ATP</text>
            <dbReference type="Rhea" id="RHEA:18473"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:73183"/>
            <dbReference type="EC" id="2.4.2.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 15">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 1/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 15">Heteromultimer composed of HisG and HisZ subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 15">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="15">Lacks the C-terminal regulatory region which is replaced by HisZ.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 15">Belongs to the ATP phosphoribosyltransferase family. Short subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.17" evidence="6 15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368797.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13840"/>
    <dbReference type="EnsemblBacteria" id="ADO54153">
        <property type="protein sequence ID" value="ADO54153"/>
        <property type="gene ID" value="PPSC2_00850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.158"/>
    <dbReference type="eggNOG" id="COG0040">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038115_2_0_9"/>
    <dbReference type="OMA" id="YVMMDYD"/>
    <dbReference type="OrthoDB" id="1419568at2"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00006"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003879">
        <property type="term" value="F:ATP phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13595">
        <property type="entry name" value="PBP2_HisGs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01018">
        <property type="entry name" value="HisG_Short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013820">
        <property type="entry name" value="ATP_PRibTrfase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001348">
        <property type="entry name" value="ATP_PRibTrfase_HisG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024893">
        <property type="entry name" value="ATP_PRibTrfase_HisG_short"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21403">
        <property type="entry name" value="PTHR21403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01634">
        <property type="entry name" value="HisG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00070">
        <property type="entry name" value="hisG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 15" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="12 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 15" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="15 17" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="13 15" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="11 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 15 17" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HisG" evidence="16">
        <location>
            <begin position="54"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00020998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00024861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF01634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO54153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="214" mass="23865" checksum="F30AA20B151E1C17" modified="2011-01-11" version="1">MTETLKVAMPKGRIYKQASKLFRQAGVPIPLDVDETRKLVIPLPELGMEFIMAKPVDVPTYVEYGAADIGIVGKDVLLEENKDVYELLDLGIARCRMSVIALPDWQPGIRQRVATKYPNVASQYFREQGQQVEVIKLNGSIELAPLIGLADRIVDMVETGQTLRENGLVEQISILDITSRLIANRVSYRMKNGPIQALCDRLHQVIPTEVVPKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGD5</accession>
    <name>E3EGD5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glucokinase</fullName>
            <ecNumber evidence="2">2.7.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Glucose kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">glcK1</name>
        <name evidence="5" type="ORF">PPSC2_00900</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ROK (NagC/XylR) family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368807.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13890"/>
    <dbReference type="EnsemblBacteria" id="ADO54163">
        <property type="protein sequence ID" value="ADO54163"/>
        <property type="gene ID" value="PPSC2_00900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.168"/>
    <dbReference type="eggNOG" id="COG1940">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036604_0_1_9"/>
    <dbReference type="OMA" id="DHLVMIT"/>
    <dbReference type="OrthoDB" id="1130699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004340">
        <property type="term" value="F:glucokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004654">
        <property type="entry name" value="ROK_glcA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00744">
        <property type="entry name" value="ROK_glcA_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01125">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00014701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00032386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="316" mass="32941" checksum="2A785A9C4E625269" modified="2011-01-11" version="1">MSESIYVGVDLGGTAIKVGICNENGQLLHTYEGPTETDKGVDVVIGNIEKYVRHIVEESPYEWDQLKGVGAGVAGFTNVRDGIIVLAPNIGFRDVPIRALLENRIGKPVKIDNDANVAALGEAWAGAGKGIENCVCYTLGTGVGGGIIINGKIYQGSSGMAGEIGHISVVPDLEAIQCGCGKMGCLETVSSATGIIRMAKDAVERGDRTSLALEDHIAAKEVFDAAKAGDEVALRIVNRAAFYLGKSMAAVAAVLNPELFIIGGGVSKAGDFLFEEMRRVYAKLAPEPLQKGVYIVPAVLGNDAGIVGAAGLLLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGD7</accession>
    <name>E3EGD7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Gluconeogenesis factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvcK</name>
        <name evidence="3" type="ORF">PPSC2_00910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Required for morphogenesis under gluconeogenic growth conditions.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the gluconeogenesis factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368809.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13900"/>
    <dbReference type="EnsemblBacteria" id="ADO54165">
        <property type="protein sequence ID" value="ADO54165"/>
        <property type="gene ID" value="PPSC2_00910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.170"/>
    <dbReference type="eggNOG" id="COG0391">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044041_0_1_9"/>
    <dbReference type="OMA" id="LCGDDDW"/>
    <dbReference type="OrthoDB" id="665169at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043743">
        <property type="term" value="F:LPPG:FO 2-phospho-L-lactate transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10680">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00973">
        <property type="entry name" value="Gluconeogen_factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002882">
        <property type="entry name" value="CofD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038136">
        <property type="entry name" value="CofD-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010119">
        <property type="entry name" value="Gluconeogen_factor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30135">
        <property type="entry name" value="PTHR30135"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01933">
        <property type="entry name" value="CofD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142338">
        <property type="entry name" value="SSF142338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01826">
        <property type="entry name" value="CofD_related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="35577" checksum="FFC498E851DFF0FF" modified="2011-01-11" version="1">MKETGSQRERPRIVVMGGGTGLSVMLRGLKQKPLDITAIVTVADDGGSSGILRSELQMPPPGDIRNVLTALADVEPVMSDMLKYRFGAGSGLSGHSLGNLILAAMTDISGDFVTAVRELSRVFAVRGRVLPAAEEGVVLSAEMEDGTVITGESKIPEAGGRIKRVFLEPTHVEPLPEAVEAINEADAILIGPGSLYTSILPNLLVPKLAEAVVKSDAIKIFVCNVMTQPGETDGYTVGDHLQAIYEHVGHHLFDYVIVNNGEIPPQVQEMYAEQGAKPVQVDMGELADRGYKVVADTLVLFRTYLRHDADKLSQHIYQLVQNWMLRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGM0</accession>
    <name>E3EGM0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">PTS beta-glucoside transporter subunit IIABC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">treP</name>
        <name evidence="16" type="ORF">PPSC2_03430</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369296.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0676"/>
    <dbReference type="EnsemblBacteria" id="ADO54659">
        <property type="protein sequence ID" value="ADO54659"/>
        <property type="gene ID" value="PPSC2_03430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.669"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_2_1_9"/>
    <dbReference type="OMA" id="VVTGMHH"/>
    <dbReference type="OrthoDB" id="196185at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015574">
        <property type="term" value="F:trehalose transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036878">
        <property type="entry name" value="Glu_permease_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018113">
        <property type="entry name" value="PTrfase_EIIB_Cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001127">
        <property type="entry name" value="PTS_EIIA_1_perm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001996">
        <property type="entry name" value="PTS_IIB_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011296">
        <property type="entry name" value="PTS_IIBC_treh"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00358">
        <property type="entry name" value="PTS_EIIA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00367">
        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55604">
        <property type="entry name" value="SSF55604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00826">
        <property type="entry name" value="EIIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00830">
        <property type="entry name" value="PTBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01992">
        <property type="entry name" value="PTS-IIBC-Tre"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51093">
        <property type="entry name" value="PTS_EIIA_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00371">
        <property type="entry name" value="PTS_EIIA_TYPE_1_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51098">
        <property type="entry name" value="PTS_EIIB_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01035">
        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="113"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="156"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="229"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="261"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="343"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="402"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="442"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="14">
        <location>
            <begin position="5"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="15">
        <location>
            <begin position="108"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-1" evidence="13">
        <location>
            <begin position="514"/>
            <end position="619"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO54659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="654" mass="70398" checksum="2815DAD012CBAF86" modified="2011-01-11" version="1">MAIERAQVEDIIKAVGGKDNIEASTHCVTRLRFALYDDKLVDKDALEQNDLVKGQFSSQGQYQVVIGPGLVDKVYDEMISITGGSRASKDDVKNAASKKQNPIQRAIKTLADIFIPILPAIVTAGLLLGINNILTGKGIFFEGMALVQVYPQWTDFASIINTIASTAFTFLPALIGWSAVVRFGGSPLLGIVLGLILVHPDLLSAYSYADAVTKGTVPVWDLFGWEVNKIGYQGQVLPVLVSAYVLAQIEKFLNKKIADSFKLLLVAPITLLITGFLAFTVIGPVTFMIGNAITTGLVYVFDLAPALGGLIYGGFYALLVITGMHHTFLAVDVQLIGTQGGTFLWPMLALSNIAQGAGALAMMLVLKEQKGKGLALTSSVSAFLGVTEPAIFGVNIRYKYPFVFGMIGSGIAGILLTVNHVLASSIGVGGIPGFLSIFPNNWGVFFVGMAIVLIVPFALTFMYGKLLNKRRQTPATPANDSIRKNSDQQNSALDVLEVKTPVLGHVVPLEQVPDPAFAERQMGQGIAVEPKDGRILAPFSGKVIHIMVKSKHALILEHPTGVQILVHVGINTVSLKGEGFTMHVETGQNVKQGQLLMEFDRELIQKSGYPMITPVIVPEGQSMIESIEELPGEANDLQYVLMRIHLNSSSDKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH61</accession>
    <name>E3EH61_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Coproporphyrin III ferrochelatase</fullName>
            <ecNumber evidence="8">4.99.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">hemH</name>
        <name evidence="8" type="synonym">cpfC</name>
        <name evidence="10" type="ORF">PPSC2_08870</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Involved in coproporphyrin-dependent heme b biosynthesis. Catalyzes the insertion of ferrous iron into coproporphyrin III to form Fe-coproporphyrin III.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>Fe-coproporphyrin III + 2 H(+) = coproporphyrin III + Fe(2+)</text>
            <dbReference type="Rhea" id="RHEA:49572"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:68438"/>
            <dbReference type="ChEBI" id="CHEBI:131725"/>
            <dbReference type="EC" id="4.99.1.9"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="7">
            <dbReference type="Rhea" id="RHEA:49574"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 8 9">Porphyrin-containing compound metabolism; protoheme biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 9">Belongs to the ferrochelatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.99.1.9" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370470.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21335"/>
    <dbReference type="EnsemblBacteria" id="ADO55852">
        <property type="protein sequence ID" value="ADO55852"/>
        <property type="gene ID" value="PPSC2_08870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1870"/>
    <dbReference type="eggNOG" id="COG0276">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018884_2_1_9"/>
    <dbReference type="OMA" id="LGDPYHC"/>
    <dbReference type="OrthoDB" id="780534at2"/>
    <dbReference type="UniPathway" id="UPA00252"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004325">
        <property type="term" value="F:ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006783">
        <property type="term" value="P:heme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00419">
        <property type="entry name" value="Ferrochelatase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03411">
        <property type="entry name" value="Ferrochelatase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00323">
        <property type="entry name" value="Ferrochelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001015">
        <property type="entry name" value="Ferrochelatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019772">
        <property type="entry name" value="Ferrochelatase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033644">
        <property type="entry name" value="Ferrochelatase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033659">
        <property type="entry name" value="Ferrochelatase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11108">
        <property type="entry name" value="PTHR11108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00762">
        <property type="entry name" value="Ferrochelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00109">
        <property type="entry name" value="hemH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00534">
        <property type="entry name" value="FERROCHELATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 8 9" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="3 8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="5 8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Fe-coproporphyrin III binding" evidence="8">
        <location>
            <begin position="45"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="8">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>Fe-coproporphyrin III</name>
            <dbReference type="ChEBI" id="CHEBI:68438"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="29"/>
        </location>
        <ligand>
            <name>Fe-coproporphyrin III</name>
            <dbReference type="ChEBI" id="CHEBI:68438"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Fe-coproporphyrin III</name>
            <dbReference type="ChEBI" id="CHEBI:68438"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="35367" checksum="B417BE7E05F32075" modified="2011-01-11" version="1">MKTKVGVLVMSYGTPESLDQVEAYYTHIRRGHAPSPEQLKELKDRYEAIVGGVFPLRQNTDRQVHNLQETLNQENRNLDIEFVCYQGLKHAKPFIEDGIEAMVQDGIRTAVGVVLAPHYSVMSVGSYIKRAQAKAQELDLAISFVESYYLHPKLIKTLTERVNAKLALFEEAGAKRDEVRVLFSAHSLPERILAMGDPYVEQLMATSQAVADKAGITNWQFTWQSAGRTAEPWLGPDILDTMHSLKEEQVEYVLAAPVGFVSDHLEVLYDLDIEAQALAKELDMRFQRIDSLNSDPLYMETLSDVIIDQWKKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH3</accession>
    <name>E3EHH3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Aspartokinase</fullName>
            <ecNumber evidence="12">2.7.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">dapG</name>
        <name evidence="16" type="ORF">PPSC2_10165</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the phosphorylation of the beta-carboxyl group of aspartic acid with ATP to yield 4-phospho-L-aspartate, which is involved in the branched biosynthetic pathway leading to the biosynthesis of amino acids threonine, isoleucine and methionine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>ATP + L-aspartate = 4-phospho-L-aspartate + ADP</text>
            <dbReference type="Rhea" id="RHEA:23776"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57535"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="13">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 1/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="13">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 1/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the aspartokinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.4" evidence="12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370735.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22635"/>
    <dbReference type="EnsemblBacteria" id="ADO56126">
        <property type="protein sequence ID" value="ADO56126"/>
        <property type="gene ID" value="PPSC2_10165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2142"/>
    <dbReference type="eggNOG" id="COG0527">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009116_3_1_9"/>
    <dbReference type="OMA" id="LMSCGEV"/>
    <dbReference type="OrthoDB" id="1067792at2"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00015"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00461"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004072">
        <property type="term" value="F:aspartate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005260">
        <property type="entry name" value="Asp_kin_monofn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001341">
        <property type="entry name" value="Asp_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018042">
        <property type="entry name" value="Aspartate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027795">
        <property type="entry name" value="CASTOR_ACT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13840">
        <property type="entry name" value="ACT_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000726">
        <property type="entry name" value="Asp_kin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00656">
        <property type="entry name" value="asp_kin_monofn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00657">
        <property type="entry name" value="asp_kinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00324">
        <property type="entry name" value="ASPARTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="7 12 16" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 12 16" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="14">
        <location>
            <begin position="3"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="ACT_7" evidence="15">
        <location>
            <begin position="338"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="7"/>
            <end position="10"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="178"/>
            <end position="179"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="214"/>
            <end position="215"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000726-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF13840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO56126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="405" mass="43241" checksum="C44DCE6EC55C3832" modified="2011-01-11" version="1">MGILVQKFGGTSLSTPEARQLVLAHVKRELKQNFQLVVVVSAMGRKGEPYATDTLLDWAASNGDSLPKRERDLLLCCGEIISAATLCSLMEKEGIPATVLTGAQAGFITDDQYGNARILDIKPDRIVEELNQGRVVIVTGFQGQTADGDMTTLGRGGSDTSATALGAALHADMVDIYTDVNGILTADPRIVENAKPLAHVSYTEICNMAHQGAKVIHPRAVEIAMQANIPVRVRSTFSEGEGTLVTHPEGFKDVQADIVDRFVTGIAYVGNVTQITVELKSGLEHLQLQVFKSMAEHGISVDFINVTPSGAVYTVFDNDGSKAVEVLNGLGLEPKILAGCAKVSVIGGGINGVPGIMATIVEALTESDVQILQSADSNTTIWVLVKKEDMVQAVRALHNKFELHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHJ1</accession>
    <name>E3EHJ1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6 7">Protein RecA</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">Recombinase A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 12" type="primary">recA</name>
        <name evidence="12" type="ORF">PPSC2_10245</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 8">Belongs to the RecA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56144.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025679773.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22715"/>
    <dbReference type="EnsemblBacteria" id="ADO56144">
        <property type="protein sequence ID" value="ADO56144"/>
        <property type="gene ID" value="PPSC2_10245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2159"/>
    <dbReference type="eggNOG" id="COG0468">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040469_1_2_9"/>
    <dbReference type="OrthoDB" id="1080436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00983">
        <property type="entry name" value="recA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00268">
        <property type="entry name" value="RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013765">
        <property type="entry name" value="DNA_recomb/repair_RecA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020584">
        <property type="entry name" value="DNA_recomb/repair_RecA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023400">
        <property type="entry name" value="RecA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020587">
        <property type="entry name" value="RecA_monomer-monomer_interface"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45900">
        <property type="entry name" value="PTHR45900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00154">
        <property type="entry name" value="RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00142">
        <property type="entry name" value="RECA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54752">
        <property type="entry name" value="SSF54752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02012">
        <property type="entry name" value="tigrfam_recA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00321">
        <property type="entry name" value="RECA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50163">
        <property type="entry name" value="RECA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 8" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 6 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 6 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="RECA_2" evidence="10">
        <location>
            <begin position="34"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="RECA_3" evidence="11">
        <location>
            <begin position="198"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="334"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="64"/>
            <end position="71"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56144.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="353" mass="38234" checksum="E3F8C70C18E2D9F7" modified="2015-05-27" version="2">MSDRRAALDMALRQIEKQFGKGSIMKLGESTHMQVETIPSGSIALDIALGTGGFPRGRIIEVYGPESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVRRIESLKMGNDIVGNRTRIKVVKNKVAPPFRQAEVDIMYGEGISKEGSLIDIGTEHDIVDKSGAWYSYEGERLGQGRENAKQFLKENPNIASTIEQKIRVASNLITTIAPPTEEELAQEAKEEQELLELE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHL5</accession>
    <name>E3EHL5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0756 membrane protein PPSC2_10355</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yeaL</name>
        <name evidence="2" type="ORF">PPSC2_10355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0756 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370775.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22825"/>
    <dbReference type="EnsemblBacteria" id="ADO56168">
        <property type="protein sequence ID" value="ADO56168"/>
        <property type="gene ID" value="PPSC2_10355"/>
    </dbReference>
    <dbReference type="GeneID" id="66577844"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2181"/>
    <dbReference type="eggNOG" id="COG2707">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_125889_0_0_9"/>
    <dbReference type="OMA" id="SKGINWG"/>
    <dbReference type="OrthoDB" id="1858774at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01874">
        <property type="entry name" value="UPF0756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007382">
        <property type="entry name" value="UPF0756_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38452">
        <property type="entry name" value="PTHR38452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04284">
        <property type="entry name" value="DUF441"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="15271" checksum="94DA4C241C2549A9" modified="2011-01-11" version="1">MDYSSLILLVLAGLGIISGNSTVTIAMVVLLLLRVTSFHTAFPWLEKYGLTIGIIILTIGVMTPLASGKISINQVTESFLHWKSLLAIGIGILVAYLGGRGVTLMSGQPIIVTGLLIGTVIGVAFFKGVPVGPLIAAGLLSLLIGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI48</accession>
    <name>E3EI48_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-868</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-868</name>
        <name evidence="1" type="ORF">PPSC2_03690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369352.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0733"/>
    <dbReference type="EnsemblBacteria" id="ADO54716">
        <property type="protein sequence ID" value="ADO54716"/>
        <property type="gene ID" value="PPSC2_03690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.726"/>
    <dbReference type="eggNOG" id="ENOG5032XFJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_148715_0_1_9"/>
    <dbReference type="OMA" id="PAVETYF"/>
    <dbReference type="OrthoDB" id="1644255at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="13179" checksum="CC9C5262DEAB08BF" modified="2011-01-11" version="1">MNSHRSMPPAVETYFTSANKSRLEAFTSAFDKDALILDNHREIKGKEAIKSWCEAEILEPNVTFEIVDMDDINNTIVVIAKVDGDFDKSNLPDPLLLKHQFLVNNHKIKELIITLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI53</accession>
    <name>E3EI53_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-873</name>
        <name evidence="1" type="ORF">PPSC2_03715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369357.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0738"/>
    <dbReference type="EnsemblBacteria" id="ADO54721">
        <property type="protein sequence ID" value="ADO54721"/>
        <property type="gene ID" value="PPSC2_03715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.731"/>
    <dbReference type="eggNOG" id="ENOG502ZFHJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_959234_0_0_9"/>
    <dbReference type="OrthoDB" id="2106774at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="304" mass="35008" checksum="EAF69725E4B0BFB2" modified="2011-01-11" version="1">MRIFQFWKKNKKTVVAINLDTAIPAAIIKVGGLVDQPEQFTAEAKNSAAMLGEEALPLFPRYFFGTELQKPESLAGKYEGLGDWLHIQQDAIFEIIYNYREKAIPMLYEVAFGVYDWTQYKAVRILTRLAREGLHTDQIVDDIISHVDDFRYEAQMPTFYFLSGLTGNKKVAALLQRHFLENLEYDPIDAFDIFENLHRCSPDVAMRHADFLKAIARGEGLEGRSPLLDGAIGTTDENGKQEYHWPDDEPVEEHHQLRAAIFYYQLNSHDEEVNRLLDQWEVSHPEENVRRYIGKLRGEGQGES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI81</accession>
    <name>E3EI81_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9 10">Ribonuclease J</fullName>
            <shortName evidence="9">RNase J</shortName>
            <ecNumber evidence="9 10">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">rnj</name>
        <name evidence="13" type="ORF">PPSC2_03835</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10">Binds 2 Zn(2+) ions per subunit. It is not clear if Zn(2+) or Mg(2+) is physiologically important.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer, may be a subunit of the RNA degradosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9 10">Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="9 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369385.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16650"/>
    <dbReference type="EnsemblBacteria" id="ADO54749">
        <property type="protein sequence ID" value="ADO54749"/>
        <property type="gene ID" value="PPSC2_03835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.759"/>
    <dbReference type="eggNOG" id="COG0595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008727_3_1_9"/>
    <dbReference type="OMA" id="KVNSWGI"/>
    <dbReference type="OrthoDB" id="580619at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004534">
        <property type="term" value="F:5'-3' exoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004521">
        <property type="term" value="F:endoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01491">
        <property type="entry name" value="RNase_J_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011108">
        <property type="entry name" value="RMMBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004613">
        <property type="entry name" value="RNase_J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042173">
        <property type="entry name" value="RNase_J_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030854">
        <property type="entry name" value="RNase_J_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041636">
        <property type="entry name" value="RNase_J_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001587">
        <property type="entry name" value="RNase_J_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07521">
        <property type="entry name" value="RMMBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17770">
        <property type="entry name" value="RNase_J_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004803">
        <property type="entry name" value="RnjA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00649">
        <property type="entry name" value="MG423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01292">
        <property type="entry name" value="UPF0036"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 9 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7 9" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="5 9 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 9 10" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9 10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="9" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Lactamase_B" evidence="12">
        <location>
            <begin position="19"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9 11">
        <location>
            <begin position="365"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR004803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR004803-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="556" mass="61087" checksum="20B197D2AC51F61C" modified="2011-01-11" version="1">MLADNRLLIAALGGVNEIGKNMYFIQYDQDIVVIDCGSKFPNENLPGIDLIVPDVTYLLENQDKVRALIVTHGHEDHIGGIPYLLKQINIPVFGTKLTIELIKIKLKEHNLLRDAELHLIDADSTIDVGKIQTSFFTTVHSIPDCLGVFFQTPEGNVVHTGDFKFDMSPVSGPFPDLHRMAEIGKKGVKVLLSESTNAERPGFTPSERLVGGHILDAFARAKQQVFISTFASNVNRVQQVIDAAVETGRKLVLLGRSMVNVVTVAKELGFLHMPEDLLIEAGETERYPAEKIAVLCTGSQGEPMAALSRLANSLHPKIEILPGDTVIIAAGAIPGNERNLSQVIDNLYVLGANVIYGSGSATGMHVSGHGSQEELKLMMTLMKPQYLIPIHGEFRMLHQHRQLAESVGIPMENVFIVQNGETIQIAEGRASLGPKVPSGNSLVDGLVTGDVGNIVLRDRKKLASDGMLIIVMTLSKNEKQMLATPEVISRGFVFVKDSEELMNQIRDTIMATVNELTEIEMSQWGLIKQMLKDNVGQFIYSQTKRRPMILPIIIEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI89</accession>
    <name>E3EI89_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">Adenine DNA glycosylase</fullName>
            <ecNumber evidence="3 12">3.2.2.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">mutY</name>
        <name evidence="14" type="ORF">PPSC2_03870</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Adenine glycosylase active on G-A mispairs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>Hydrolyzes free adenine bases from 7,8-dihydro-8-oxoguanine:adenine mismatched double-stranded DNA, leaving an apurinic site.</text>
            <dbReference type="EC" id="3.2.2.31"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the Nth/MutY family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.31" evidence="3 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369393.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16685"/>
    <dbReference type="EnsemblBacteria" id="ADO54757">
        <property type="protein sequence ID" value="ADO54757"/>
        <property type="gene ID" value="PPSC2_03870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.766"/>
    <dbReference type="eggNOG" id="COG1194">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012862_0_4_9"/>
    <dbReference type="OMA" id="RDPYRVW"/>
    <dbReference type="OrthoDB" id="1274533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000701">
        <property type="term" value="F:purine-specific mismatch base pair DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03431">
        <property type="entry name" value="DNA_Glycosylase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00056">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1670.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005760">
        <property type="entry name" value="A/G_AdeGlyc_MutY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003265">
        <property type="entry name" value="HhH-GPD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023170">
        <property type="entry name" value="HhH_base_excis_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044298">
        <property type="entry name" value="MIG/MutY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029119">
        <property type="entry name" value="MutY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42944">
        <property type="entry name" value="PTHR42944"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00730">
        <property type="entry name" value="HhH-GPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14815">
        <property type="entry name" value="NUDIX_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00478">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01084">
        <property type="entry name" value="mutY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6 12" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10" id="KW-0234">DNA repair</keyword>
    <keyword evidence="11 12" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 12" id="KW-0408">Iron</keyword>
    <keyword evidence="9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ENDO3c" evidence="13">
        <location>
            <begin position="44"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU365096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO54757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="46053" checksum="65B6028FFD004DAB" modified="2011-01-11" version="1">MTTNTLEQKRYFSFELLNWYTRNKRDLPWRRHRNPFYIWISEIMLQQTRVDTVIPYFNRFIARFPTIEALAEAPEEDVLKLWEGLGYYSRARNLQTAAKQVVELHGGQVPDDTQAVAALKGVGPYTTGAIMSIAFNRPEPAVDGNVMRVLSRYFLIEEDIMKGSTRAHMESLVRELIPEGRASDFNQALMELGALVCTPKSPHCLTCPVMEHCSGRLAGREETLPVKTKAKPPRLEPRSVALIEGSGANAGRLLVRQRPAKGLLARMWELPHELAGPEGYNGPVPDEPAMDHLAAHLLAEGVHARPVRFVREAEHTFSHIHWNLRVFQYEEVAVPAGEAGEQPLAAEQRASYSAAAKPGALIALAEQVEHAHNALPAGYRWISEADMSTLAFPKVFLDLINEYYAKQKEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIS8</accession>
    <name>E3EIS8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lplA1</name>
        <name evidence="2" type="ORF">PPSC2_09330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370564.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21800"/>
    <dbReference type="EnsemblBacteria" id="ADO55947">
        <property type="protein sequence ID" value="ADO55947"/>
        <property type="gene ID" value="PPSC2_09330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1965"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021021_1_1_9"/>
    <dbReference type="OMA" id="MITENYS"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168984" evidence="1">
        <location>
            <begin position="29"/>
            <end position="563"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="563" mass="63488" checksum="975E7E3A0D17CEDB" modified="2011-01-11" version="1">MFTNRSVQQCSILLLALLLLVTTGCANGKGGTAEKEDPNDTSPITFTFFGGDSSSNWNNMKDAVGQEITKKTGVTLNAEHAVNGRGEEKFALMAASGEYPDLVYPKGDIGKLVDAGALIDLTDLIDKYGPNIKKVYGDYFNRIKYSSEDPAIYTIPTNLGVDHIAFDAQAGFEIQHQALKKLGYPKIRTVQDFEKALKDYVAKYPTTNGQPTIPLSLDAEDWKMQITVTNPAVTATGGPDDGEYYIDPKTHKATLHYKRPEEREYFRWLNHMYNEGLLDKDTFVQKSDQYKSKIAAGRVIGLIDQEWNYQDAENALKAAGKDEYTYSHFPVTLNEQYEDHSLQPIGFDTASGIGITTSCKNPVRAIKFLDFLASDEGQILRNWGIEGQHYNVENGKRVIPAAVQERKNKDNASFSRESGIGLYWIWGPHYGDSVKDPTGNYYTTNYPEMITENYSQAEKESLQAYKARTWKDLFPNEKDFPVKEWGAAYNMPVPTNTNYNVIYQKSQDIVRKRIPEAVLAKPDQFDAVYDRMLQELDQAGVPKAEEIFTGLIQNRLKLWYGEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIV4</accession>
    <name>E3EIV4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">norA3</name>
        <name evidence="9" type="ORF">PPSC2_09440</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370590.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2001"/>
    <dbReference type="EnsemblBacteria" id="ADO55973">
        <property type="protein sequence ID" value="ADO55973"/>
        <property type="gene ID" value="PPSC2_09440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1991"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_13_9"/>
    <dbReference type="OMA" id="TMFFDLG"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="137"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="214"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="244"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="276"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="300"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="339"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="364"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="12"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="399" mass="43634" checksum="3ABD659F52F3A957" modified="2011-01-11" version="1">MQQGKQPLWTKEFIVLTVSNLFLFLELQMIVSSIPSYVKNAFHATSVQVSLVTTLFALSAIVARLFSARMLEKGHRSALIFVGLLFALAGTLGYSVSPTIAVLLLMRMLFGIGFGMSSTAFPTMVTDVIPPKRLGEGMGFFSLSTSLAMSIGPTIGISMLQYGSFNLLAYSTSAVIVVIFPLAYWLIRTLPKGHVEPPMVPLEEGRKPAFNRKLWIPALLNMLMSITYGGLLGFMALYGDEANLAHPAYFFLFNAVSVLIVRPFSGRIYDKKGAKALLIPGSLFLIGGLILLSYAHSDAFMYLSALCYGIGFGVMQPTLQTWMIQVVSPKQRGMANGMFLNSLDFGVAAGALILGVIAKASDYAWMYRLSSLFVVLFLLIYVIQIIASRKPKRNVPLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ06</accession>
    <name>E3EJ06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370793.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56187">
        <property type="protein sequence ID" value="ADO56187"/>
        <property type="gene ID" value="PPSC2_10445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2201"/>
    <dbReference type="HOGENOM" id="CLU_1843164_0_0_9"/>
    <dbReference type="OrthoDB" id="1733744at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16166" checksum="5E627998D7C3AB50" modified="2011-01-11" version="1">MNMLNSKFKKIGLSSAIFVILTITFVCSYQVYQNVETVHNYFSPKIISVMAIEKETDEWNSIKFDGQDYVKFDSVFWDKTIINDANSAGNVLVKVKDEQGDIVIDEFQVSPGNSKQLIGLNKDKQYYFEIKAAKGQFTINAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ74</accession>
    <name>E3EJ74_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Autotransporter adhesin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">xynX5</name>
        <name evidence="4" type="ORF">PPSC2_11225</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56361.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599712.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2389"/>
    <dbReference type="EnsemblBacteria" id="ADO56361">
        <property type="protein sequence ID" value="ADO56361"/>
        <property type="gene ID" value="PPSC2_11225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2376"/>
    <dbReference type="eggNOG" id="COG0737">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_284522_0_0_9"/>
    <dbReference type="OrthoDB" id="744698at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003343">
        <property type="entry name" value="Big_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008964">
        <property type="entry name" value="Invasin/intimin_cell_adhesion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02368">
        <property type="entry name" value="Big_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00635">
        <property type="entry name" value="BID_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49373">
        <property type="entry name" value="SSF49373"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168477" evidence="2">
        <location>
            <begin position="33"/>
            <end position="1094"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="904"/>
            <end position="962"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="963"/>
            <end position="1026"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="1027"/>
            <end position="1089"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="641"/>
            <end position="722"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="813"/>
            <end position="859"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="648"/>
            <end position="716"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="813"/>
            <end position="830"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="837"/>
            <end position="857"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56361.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1094" mass="115287" checksum="14A4BA1780890E3E" modified="2015-05-27" version="2">MHFCKSTKRFTYALTAVSLIFSSAISVADAGAAPTAQPKLIQDGTWSKSDTWMDAPENYVGRSSDTVLGYYRSAIQFEMPELTGKVVTKATLRIHISSIGYSYNLNPFLTVYGSTADVWSNGAFPLNPTDQPLNTKTGSDLQVGWVDFDVTHFVQQQTDDIVSFALLANEEGNPGDYSEITYSADDNGVDIPQLILETAALPAVSKMPEVAAVTTEEDIPTSNITITSNPQDSTVVTHYQVMNIIGGKLYHSDGVTELFDGTFITAAEASDGVRFVPMANANNAAGDTFSFDVKAAQSATGDGLSDATRAVVHVTEVNDAPTAQDQTLSSISEDSGERTIPFAELLAHASAGPNENGQHLTISSVSSIAGGAVRLDGTNVIFTPQPDFNGTASFSFTVTDDGTSDGVSVPQSVVKQAFFGVNSVADVPNVTDALTEEDKQSFDGLILTRNQVDGTDVSYFRISNIIGGTLYKNDGVMEIRDGQFISVADGEAGLKFTPNLYANSPSGDHFSFDVQSSLDMAGTGISEPNQARITVSEVNNSPIAVNDTLPSLSANAGAQSIAVDELLANDTAGPVNESLQHLSIASVENAQGGTVVLDGSVVLFTPNLDYQGPASFDYTVIDNGTTNGALDVKNSTATASFSINSVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVQTDDNYTELRASIKNRKMLVGGTERATASVVKSDSSEIDVSEKATWTSSNTNVATVNQGEIRALSEGNTVISATYSGYSFNVPITVTAVTAPAPNNAGSDSSSSSGSGSGHRNSDHSSDDSSSNTATSAVSSSSVTVSKEPVAVPEELVTEPTVPVQDIFNSNVVVADNKVLQNIKSKAESALNSSTNVKPSDLQGHWAEKTVDTFSKLGIVNGYKDGSFRPDGEITRAEFSTIISRIFDISVGNQPVVLNDIGDHWAQDAITKLTTAGVLNGYEDGTFRPDQTIVRQEMAAILARILDLDRLKKDTSNEKSFTDLSTSFAADTIKQLAQAGVLSGISTSQFGPKYHASRAEALTAIYNALSLNSEIKTVLESLEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJD1</accession>
    <name>E3EJD1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxalate decarboxylase oxdC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">oxdD</name>
        <name evidence="2" type="ORF">PPSC2_11505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56418.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23870"/>
    <dbReference type="EnsemblBacteria" id="ADO56418">
        <property type="protein sequence ID" value="ADO56418"/>
        <property type="gene ID" value="PPSC2_11505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2432"/>
    <dbReference type="eggNOG" id="COG2140">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1946675_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin type-1" evidence="1">
        <location>
            <begin position="66"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56418.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14231" checksum="B5BD883900CFFE06" modified="2015-05-27" version="2">MSIFLTPVMYGISPVVIGLAADELALLPKKEAYFAKRPVPSIASHDAYPRASSDLITKHRYPLMAKQPRLAPGGGTQRTVTVEDFPISSTMAGSVIELEPGGLREMHWHPNADEWQYYLDGVVITRPLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK58</accession>
    <name>E3EK58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_26335</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="14 15">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
            <plasmid evidence="14 15">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the transposase 35 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the transposase 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386181.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59767">
        <property type="protein sequence ID" value="ADO59767"/>
        <property type="gene ID" value="PPSC2_26335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5547"/>
    <dbReference type="eggNOG" id="COG0675">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032903_0_0_9"/>
    <dbReference type="OMA" id="KQTARFT"/>
    <dbReference type="OrthoDB" id="222391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001959">
        <property type="entry name" value="Transposase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010095">
        <property type="entry name" value="Transposase_IS605_OrfB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021027">
        <property type="entry name" value="Transposase_put_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12323">
        <property type="entry name" value="HTH_OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01385">
        <property type="entry name" value="OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07282">
        <property type="entry name" value="OrfB_Zn_ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01766">
        <property type="entry name" value="tspaseT_teng_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-0614">Plasmid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="HTH_OrfB_IS605" evidence="13">
        <location>
            <begin position="15"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_IS605" evidence="11">
        <location>
            <begin position="174"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_Zn_ribbon" evidence="12">
        <location>
            <begin position="299"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF12323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO59767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="372" mass="43043" checksum="F5FA1253837B2C12" modified="2011-01-11" version="1">MQRSQDFSTKNLNHIAYKYRIYPNREQRLLIQQMFGCCRFVFNHFLAMWNDTYTATGKGLSYNTCATRLPALKQKYDWLKKVDSIALQSAVRNVADSFARYFKKQNQAPRFKSRKHPVQSYTTKYTNGNIAVNNTQIKLPKLGWLRFANSRTPKGRILSATVRRNAAGKYYVSIVCEVEIKPLPQTVKHIGIDLGLKEFAVCSDGLRVANPKAFRQQEQKLAFWQRRMSRRTKGGSNWQKAKQKVALIHERIANIRHDFLHKLSTKLIRENQTISIEHLRVANMLKNHKLAKSIADASWSEFRRQLTYKAEWYGRTLKMADTFAPTSQACHVCGALHQEVKNLSVRQWVCPSCQTLHDRDVNAAHNIKDVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKD7</accession>
    <name>E3EKD7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">LysM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27745</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385878.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0070"/>
    <dbReference type="EnsemblBacteria" id="ADO59464">
        <property type="protein sequence ID" value="ADO59464"/>
        <property type="gene ID" value="PPSC2_27745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5879"/>
    <dbReference type="HOGENOM" id="CLU_955951_0_0_9"/>
    <dbReference type="OrthoDB" id="1444566at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013974">
        <property type="entry name" value="SAF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08666">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysM" evidence="2">
        <location>
            <begin position="244"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="271"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="32411" checksum="0F93179B95037B1B" modified="2011-01-11" version="1">MRGKNKLLLTVLLITFVATSGMFYYQNVYAPKQDEKNKVFVLVAKKDISEGAAFTPDNIGAIKMDKNMVLPNFITNFDEMKGKTASTDLFSNEIVTKRQTTGVSDGSKKFKLGIEAANMPTSIKNGDAVRVFVQTTIGNKIFEIFDKKEVVNVNFKKSASGQESQLVESVDLLVSDKEAVTYFDAQKAGSIFIVRFNNLTEKDTVITPKYDMNSDEIKKLKVEAEKPDFTRSNMQEDRSADSSVRYTVRTGDTFESISKLFNVTPSEIKKLNPGVTSLSPGDKLNVKREDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKG8</accession>
    <name>E3EKG8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386214.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0410"/>
    <dbReference type="EnsemblBacteria" id="ADO59800">
        <property type="protein sequence ID" value="ADO59800"/>
        <property type="gene ID" value="PPSC2_26160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5509"/>
    <dbReference type="HOGENOM" id="CLU_2937333_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="7040" checksum="7F9E79F829FDD671" modified="2011-01-11" version="1">MEKIQVEALYTLSGNEGIHISKGKEYTVAKVDFQTYELVGELNRKISLKEEELKYRFKML</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKS9</accession>
    <name>E3EKS9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosome hibernation promoting factor</fullName>
            <shortName evidence="2">HPF</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hpf</name>
        <name evidence="4" type="ORF">PPSC2_27445</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with 100S ribosomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HPF/YfiA ribosome-associated protein family. Long HPF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385944.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0136"/>
    <dbReference type="EnsemblBacteria" id="ADO59530">
        <property type="protein sequence ID" value="ADO59530"/>
        <property type="gene ID" value="PPSC2_27445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5809"/>
    <dbReference type="eggNOG" id="COG1544">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071472_0_3_9"/>
    <dbReference type="OrthoDB" id="1766263at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00552">
        <property type="entry name" value="RaiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.505.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00839">
        <property type="entry name" value="HPF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034694">
        <property type="entry name" value="HPF_long/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036567">
        <property type="entry name" value="RHF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003489">
        <property type="entry name" value="RHF/RaiA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032528">
        <property type="entry name" value="Ribosom_S30AE_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038416">
        <property type="entry name" value="Ribosom_S30AE_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16321">
        <property type="entry name" value="Ribosom_S30AE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02482">
        <property type="entry name" value="Ribosomal_S30AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69754">
        <property type="entry name" value="SSF69754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00741">
        <property type="entry name" value="yfiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="Ribosom_S30AE_C" evidence="3">
        <location>
            <begin position="116"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="177" mass="20925" checksum="56BEC606EB4C1389" modified="2011-01-11" version="1">MNVQLIAKNFELTKGIRDAINKRLEKLENFIDKTTPIRITMETFKYGQKIEVMFNLHGSFVKAEETNEDLYVAIDMATDKLVKKLGKLARKRNDQKHNPQPFNLEMVNEDCHCETEERRQITKRKKFTMKPMMEEEAVLQMKMLGHETFMFFNGATQRMCLLYQRKDGNYGIIESVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKX5</accession>
    <name>E3EKX5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GIY-YIG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386294.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59880">
        <property type="protein sequence ID" value="ADO59880"/>
        <property type="gene ID" value="PPSC2_25755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5420"/>
    <dbReference type="HOGENOM" id="CLU_1297721_0_0_9"/>
    <dbReference type="OrthoDB" id="1864022at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01541">
        <property type="entry name" value="GIY-YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00465">
        <property type="entry name" value="GIYc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GIY-YIG" evidence="1">
        <location>
            <begin position="6"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="205" mass="24623" checksum="B4A07B2121513E2C" modified="2011-01-11" version="1">MHKNAGSGIYAIINKKLNLVYVGQTMVSFSVRWAEHVDKIPNFFYDPHRSKLYLDKDTKYIVLKQLDSSMSKKDFLKYEHEAHKFYKSKGWHVVSTSFYNDDMRESDFSSYTTKRFKCEVHRMVSFLRLDETRNGSYLYHNLYKQVNQHFSTDVFVRGTKSILNTLTTEELEFVILELLPRYREKKLSQYRLEYDKVPQNLEFDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL11</accession>
    <name>E3EL11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385987.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0180"/>
    <dbReference type="EnsemblBacteria" id="ADO59573">
        <property type="protein sequence ID" value="ADO59573"/>
        <property type="gene ID" value="PPSC2_27230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5763"/>
    <dbReference type="HOGENOM" id="CLU_1248537_0_0_9"/>
    <dbReference type="OMA" id="CTECDDE"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="25927" checksum="27B27030977BEAD0" modified="2011-01-11" version="1">MNIQNDILSKYIEFQRFLDGINMEELKSLSREDLSTLQKKLHEVNHRNLPYEIGKMIAKKKEEEFPQILGIHHYPELQEIAFLNEATKFRIDKHLISFRVGQYLNSFYRFITSSKKLLMLEDFLVEKGIVEQVFIVKCPCCTHGHLSKPLTIEAWDALKEKIHSFEDEEDFDALSDEGLLESFCTECDDEIDLALLKDENRIVVKKALKLIKGRDTRYDNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL23</accession>
    <name>E3EL23_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385999.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0192"/>
    <dbReference type="EnsemblBacteria" id="ADO59585">
        <property type="protein sequence ID" value="ADO59585"/>
        <property type="gene ID" value="PPSC2_27185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5750"/>
    <dbReference type="eggNOG" id="ENOG50307KX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2863645_0_0_9"/>
    <dbReference type="OrthoDB" id="2190271at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7526" checksum="9BE67799459BF2C5" modified="2011-01-11" version="1">MTDKPDFKKGDPVQHKTKKLHEAQFEKWSKSGKRIGVNHNFVWPYGAGYKTDYFDPKNIVRDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL62</accession>
    <name>E3EL62_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386038.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59624">
        <property type="protein sequence ID" value="ADO59624"/>
        <property type="gene ID" value="PPSC2_27025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5715"/>
    <dbReference type="eggNOG" id="ENOG503384G">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1081178_0_0_9"/>
    <dbReference type="OMA" id="RNAAYWA"/>
    <dbReference type="OrthoDB" id="1342393at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168503" evidence="2">
        <location>
            <begin position="29"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="257" mass="27968" checksum="2F2626118C1B0B7A" modified="2011-01-11" version="1">MKKIKVFLPALLMLLFFTSFFGITSVSASEANPSVSASEANPSVSASEANPSVSASEANPSVSASEANPSVSASEATYDFSPSALEPDSTYPGTNIRVKVGDVLYSSKALGGSAMIVGHVGIIGPDYMVYHVNAVNDNQGEGGKRDTISYYQMRHNPNESIAVYRATHGRNAAYWAKNNYSSVTSYHIPVYSWDNFQLKTINPNYCSKFIWQAFYYGNYDTDYIIGYYTPNKEAFVTPGQVVNSDDLTYVGSFGSRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL98</accession>
    <name>E3EL98_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386344.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0541"/>
    <dbReference type="EnsemblBacteria" id="ADO59930">
        <property type="protein sequence ID" value="ADO59930"/>
        <property type="gene ID" value="PPSC2_28520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6052"/>
    <dbReference type="HOGENOM" id="CLU_2790081_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="8477" checksum="02BEB70E9E85D216" modified="2011-01-11" version="1">MKCSYFMVFHIKIYPGQNWFERTYNNLLTIDWQQVIQLMIVFNIMMFGFIGLSFLIEKLIEWLIEKYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBQ4</accession>
    <name>A0A0D5ZBQ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1669"/>
    <dbReference type="EnsemblBacteria" id="AKA44210">
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        <property type="gene ID" value="PPSC2_07900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1653"/>
    <dbReference type="eggNOG" id="COG3271">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_085378_1_1_9"/>
    <dbReference type="OrthoDB" id="732426at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022118">
        <property type="entry name" value="Peptidase_C70_AvrRpt2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12385">
        <property type="entry name" value="Peptidase_C70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="20981" checksum="C06A9388B690C90F" modified="2015-05-27" version="1">MGVLALSAIAPLTSAQEINSDKSTPSYIDYKSLHVPSHKQEKSNWCWAATSQMAIEHLGGNKTQSQIVKYIKGSLVNKGGSDKEVKSALAYGGVSSTIDKEPIPFGTIISQIKRNQPQLAHIVWKDDSDLGHMYLINGYSDNTNLGFQKVYYNDPAVGEKMDKIDYYDGFVNNRDFSWYSTINEIYVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBU5</accession>
    <name>A0A0D5ZBU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PPSC2_12865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44250">
        <property type="protein sequence ID" value="AKA44250"/>
        <property type="gene ID" value="PPSC2_12865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2741"/>
    <dbReference type="HOGENOM" id="CLU_2602756_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="8897" checksum="47C6A3E63E5836B0" modified="2015-05-27" version="1">MAHICTRLFPGTSLMNPLGRETAIQKCIWTEDGWLRLSHGGKLPTLETEAPNLPIHLFPAEEPRDHFIINPSFTAIIFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCG6</accession>
    <name>A0A0D5ZCG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cadC1</name>
        <name evidence="2" type="ORF">PPSC2_10955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599700.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2330"/>
    <dbReference type="EnsemblBacteria" id="AKA44232">
        <property type="protein sequence ID" value="AKA44232"/>
        <property type="gene ID" value="PPSC2_10955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2319"/>
    <dbReference type="eggNOG" id="COG0640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097806_4_3_9"/>
    <dbReference type="OrthoDB" id="1800563at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="4"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="11110" checksum="96623689A21691D5" modified="2015-05-27" version="1">MTTQKVINDELRVKIFKALADETRLDIIRALYASKKEMNCGEVGHIRDTTKSNTSYHLRALKEAKLIKVRKEAQTKYMSIDLETFQTYLPGFLDTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCL6</accession>
    <name>A0A0D5ZCL6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
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        <property type="protein sequence ID" value="AKA44353.1"/>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_26395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5563"/>
    <dbReference type="HOGENOM" id="CLU_2344065_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="97" mass="11428" checksum="803B1E2DB09D28B3" modified="2015-05-27" version="1">MVSIISMIAWFGLGVLLEISQYNEILDCDHKRLFVIKTPNPFKLLHVFQWIILLLIFIEPVSYLCIAVKKYLIKPIFKTVNGILQTKLWEREKEAHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4F9</accession>
    <name>E3E4F9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12790</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="entry name" value="SNARE_assoc"/>
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    </dbReference>
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    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="30"/>
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    <feature type="transmembrane region" description="Helical" evidence="2">
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            <end position="63"/>
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            <begin position="123"/>
            <end position="144"/>
        </location>
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        <location>
            <begin position="156"/>
            <end position="175"/>
        </location>
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        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56699.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="22725" checksum="FE940D942DF42BD7" modified="2015-05-27" version="2">MEFLQNFGATGLFIHAMLDAIIFPIPAFFLQLSLSAMQPESALWLATVGFAGSLLGTPIGYGIGKLSGKHVLGSVMKKKWLDSASDLFARHGEAAILIGSFTPIPFKIFTILSGCMNYTLWKLLSYAAIGRAVKFYVVGFLFYIYGRAAENMVNQVLTIMLVGVGIAIAAIWFLIRKLSERRKIRGEHQSMKKKGNGGGKKDAVDKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G6</accession>
    <name>E3E4G6_PAEPS</name>
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        <submittedName>
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        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168816" evidence="1">
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            <begin position="44"/>
            <end position="578"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56706.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="578" mass="64089" checksum="60DF63044AAE1DF6" modified="2015-05-27" version="2">MTTKWSVKSKLLTRRLAVLSISALMISTLAACGASSNPPTAKEAGKYEVTPGDPFSAYKDEITVTMGRVTTANPKLPAGDSYENNAYTRLVKKAFNAQIKDQFEANGEDYSRQVSLAIASGELPDMMRVDSKDELKELVDNDLIEDMTEIYKQYATDNIKNIYDSYEGRALDNATIDGRLMALPATSLDSAPTMVWVRQDWLDLLGIQLDADGDGTIKLDDVEKTAEEFLKRDPGQTGKPVGIPFVNTLNTTDYNGSAYTMLGVASTKGSFPQYWMKGKDGSIVYGSTTEETKQMLGVMADWFKRGIIDPQFGTRTFDDITALYTNGQCGIAFGPWHIPDWGLGNVKQKDKNAKFTAYTLEDADGKVNVAHANPANQFIVVRKGYEHPELAVKIVNLFYDKLANDKNVGTSMPEAAKYQENGVDGSTRPFNIEVNSATSLLDDYSDIVRGIKGEISLDQVRTTESKNNIKSIQTYLSNMDTDNVTAWSKYHSRINGVGLIDKLTRENKFVWMTPAFSGTTPSMKQTWANLTKMEQESFIKIVTGAEPLNYFDTFVSNWKKQGGDQVIQEIKDEVASKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4H6</accession>
    <name>E3E4H6_PAEPS</name>
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        <submittedName>
            <fullName evidence="4">Flagellar basal body P-ring biosynthesis protein FlgA</fullName>
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        <name evidence="4" type="ORF">PPSC2_13650</name>
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    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371478.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01340"/>
    <dbReference type="EnsemblBacteria" id="ADO56875">
        <property type="protein sequence ID" value="ADO56875"/>
        <property type="gene ID" value="PPSC2_13650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2904"/>
    <dbReference type="eggNOG" id="COG3745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063027_0_0_9"/>
    <dbReference type="OMA" id="IRIQFPT"/>
    <dbReference type="OrthoDB" id="1459128at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="SAF"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
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        </location>
    </feature>
    <feature type="domain" description="SAF" evidence="3">
        <location>
            <begin position="63"/>
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        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
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        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="35426" checksum="36FF8935B1122257" modified="2011-01-11" version="1">MSKLRKSSKQKLSAGCIGAGIVGMIFVSYLILNTHQMSEIRKQAEVEAEQKWKLYEQEQRTAKTGWAVVRDISPGEQITSNDLKGIKVPGSQAPSNLLANKNEVSGTTAKIELKKGSVLTSAMITANEPTPKDLRNRELKVVVLPSSLKSGDEVDIRIQFPTGQDYILLSKKKISRLEGPIVWVTMNEQEILSLSSAIVDAYLHKASIYALTYVDPQFQPKAIPTYPPNAQVLALMNSDPNLVRVAEQKLSKQLRDSLENAIGSSNNVISTPAERVLSEEVAAQHAGTAIEDAASGIDDTGSEEQDHKEQTKILTQGGSSDPYAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4H9</accession>
    <name>E3E4H9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Molybdenum ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ylmA3</name>
        <name evidence="5" type="ORF">PPSC2_13665</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01355"/>
    <dbReference type="EnsemblBacteria" id="ADO56878">
        <property type="protein sequence ID" value="ADO56878"/>
        <property type="gene ID" value="PPSC2_13665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2907"/>
    <dbReference type="eggNOG" id="COG1119">
        <property type="taxonomic scope" value="Bacteria"/>
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    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
    <dbReference type="OMA" id="MDEPCAG"/>
    <dbReference type="OrthoDB" id="1752365at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
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        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="257" mass="29229" checksum="99FDEDEB4D7F8B2A" modified="2011-01-11" version="1">MISIKNITLQREEKRILDDVSLEIREGEHWAILGRNGSGKTTLLEMMTGYMFPSRGTVEVLGQTYGQCDVREVRKQIGYISQTLLEKLALKDPVWEVVATGAYAFLRFYQEIPTEAKEKAVSLLEGMNLGDLIHHPLGTLSQGERKKVMLARSLMAEPRLLIMDEPCAGLDLFEREKMLVEIDRLRKRDLSVVYVTHHIEEIVPLFTHVALIRDGKVAAAGSKKEVLTKELIMHTYEVPVELEWDGERPWIRVCTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U0</accession>
    <name>E3E4U0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Tryptophan synthase beta chain</fullName>
            <ecNumber evidence="11">4.2.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">trpB</name>
        <name evidence="13" type="ORF">PPSC2_14555</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + L-serine = D-glyceraldehyde 3-phosphate + H2O + L-tryptophan</text>
            <dbReference type="Rhea" id="RHEA:10532"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
            <dbReference type="ChEBI" id="CHEBI:58866"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.2.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 11">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 11">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 5/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 11">Tetramer of two alpha and two beta chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the TrpB family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.20" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371665.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02205"/>
    <dbReference type="EnsemblBacteria" id="ADO57068">
        <property type="protein sequence ID" value="ADO57068"/>
        <property type="gene ID" value="PPSC2_14555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3106"/>
    <dbReference type="eggNOG" id="COG0133">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016734_3_1_9"/>
    <dbReference type="OMA" id="HGMKSYF"/>
    <dbReference type="OrthoDB" id="912282at2"/>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004834">
        <property type="term" value="F:tryptophan synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06446">
        <property type="entry name" value="Trp-synth_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00133">
        <property type="entry name" value="Trp_synth_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006653">
        <property type="entry name" value="Trp_synth_b_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006654">
        <property type="entry name" value="Trp_synth_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023026">
        <property type="entry name" value="Trp_synth_beta/beta-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001413">
        <property type="entry name" value="Trp_syn_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00263">
        <property type="entry name" value="trpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00168">
        <property type="entry name" value="TRP_SYNTHASE_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 11" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="10 11 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="8 11" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="PALP" evidence="12">
        <location>
            <begin position="56"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="11">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="398" mass="43212" checksum="A4DD8A68D1719430" modified="2011-01-11" version="1">MTQLPDNNGRFGTFGGRYVPETLMNALIELEESYRKYADDPEFKAELNGLLKDYSGRETPLYHAERLSQHLGGAKIYLKREDLNHTGAHKINNALAQGLLAKRMGKQKVIAETGAGQHGVATATVAALLGLECKVFMGEEDTVRQQLNVFRMQLLGAEVIPVTSGTRTLKDAGNEALRYWVSHVHDTFYILGSAVGPHPYPMMVRDFQRVIGDETRRQILEKEGRLPDVVVAAIGGGSNAIGMFYPFIEDQGVALIGVEAAGKGVETEFHAATMSKGTQGVFQGSMSYLLQDEYGQVQPAHSISAGLDYPGVGPEHSYLKDIERAQYVPITDQEALDALQLLCRTEGILPALESAHAVAQVAKLAPTLTADDIIVICLSGRGDKDVDSIIKYLGGNPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z1</accession>
    <name>E3E4Z1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Xaa-Pro dipeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yqhT</name>
        <name evidence="5" type="ORF">PPSC2_15165</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57199.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040103444.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02785"/>
    <dbReference type="MEROPS" id="M24.008"/>
    <dbReference type="EnsemblBacteria" id="ADO57199">
        <property type="protein sequence ID" value="ADO57199"/>
        <property type="gene ID" value="PPSC2_15165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3237"/>
    <dbReference type="eggNOG" id="COG0006">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017266_4_2_9"/>
    <dbReference type="OrthoDB" id="415910at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008235">
        <property type="term" value="F:metalloexopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001714">
        <property type="entry name" value="Pept_M24_MAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001131">
        <property type="entry name" value="Peptidase_M24B_aminopep-P_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00599">
        <property type="entry name" value="MAPEPTIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00491">
        <property type="entry name" value="PROLINE_PEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="4">
        <location>
            <begin position="5"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="3">
        <location>
            <begin position="138"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57199.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="357" mass="38987" checksum="B8A68F317333366C" modified="2015-05-27" version="2">MKNDRVLKLRQALGEHNLRAMLITSPVNRRYLTGFTGSAGYVLITESHSYLLTDFRYMTQATEQAQGFTVVQHAAQVMETVKELLSSHQISETGFEQDDVTVATHKAYSEDLSPIKLVPVSGIVEKLRVYKDAEELEVMQRAADLADATFAHILPYIKPGVSERELDLEMEFFMRKQGATSSSFDTIVASGVRSALPHGVASAKLVQAGELITFDFGALLDGYCSDLTRTVATQGDLAPQLREIYDIVLKAQLHALEHIKPGMTGREADALTRDIIASHGYGDNFGHSTGHGLGLEVHESTRLSKASDDILEPGMVVTVEPGIYVPGLGGVRIEDDIVITDSGIKVLTHSSKEFTVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E590</accession>
    <name>E3E590_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372036.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3494"/>
    <dbReference type="EnsemblBacteria" id="ADO57450">
        <property type="protein sequence ID" value="ADO57450"/>
        <property type="gene ID" value="PPSC2_16355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3491"/>
    <dbReference type="eggNOG" id="ENOG50347FF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1000563_0_0_9"/>
    <dbReference type="OrthoDB" id="1824070at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="107"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="147"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="191"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="30920" checksum="5E75A8CAA83ABD84" modified="2011-01-11" version="1">MGKDYAKFMATTANKIVFGDKDVELKLAIPHKVAQQNLEFLTSSLNKEIQVLLGDPQASFDFEDQGDDMYRKWTGRRVTADASGVVISAQKPEPEHDENQAEMFGPEQAEDDTPAGDDQAEQGEQEQTDQAGQDEQPGDQEGEGAFDDIPEWMREVGDDQEGETGEENGQRGDDSAPREMNFGEDESSGAAEGSDQEHEAPETIEIDKDTLENYILEKRPVFEDLTLDFPALYEQKRKEGVTWRDIAVGVGMTTGQLNTQLTKYKGRVKEQMTQSTAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5V8</accession>
    <name>E3E5V8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphatidylglycerophosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yutG3</name>
        <name evidence="3" type="ORF">PPSC2_19775</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372749.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06995"/>
    <dbReference type="EnsemblBacteria" id="ADO58177">
        <property type="protein sequence ID" value="ADO58177"/>
        <property type="gene ID" value="PPSC2_19775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4215"/>
    <dbReference type="eggNOG" id="COG1267">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_110655_0_0_9"/>
    <dbReference type="OMA" id="ATREWLH"/>
    <dbReference type="OrthoDB" id="1603340at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008962">
        <property type="term" value="F:phosphatidylglycerophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06971">
        <property type="entry name" value="PgpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036681">
        <property type="entry name" value="PgpA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026038">
        <property type="entry name" value="Put_PGPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007686">
        <property type="entry name" value="YutG/PgpA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04608">
        <property type="entry name" value="PgpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019587">
        <property type="entry name" value="PGPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101307">
        <property type="entry name" value="SSF101307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PgpA" evidence="2">
        <location>
            <begin position="27"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="165"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="20680" checksum="3A84203DFCDE71D7" modified="2011-01-11" version="1">MDKKKVPYSLNSKKVADATREWLHKRGVSMTEIAELVMLLQKKYYPNLTMEECLENVDKVLMKREVQNAVLTGIQLDILAEQGALLPPLQDMIEHDEGLYGVDEILAFSIVNVYGSIGFTNYGYVDKLKPGVLERLNDKSLGPINTFLDDIVGAIAASASSRIAHRKQAEREQELGEESAPNTTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E623</accession>
    <name>E3E623_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_12830</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371312.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00425"/>
    <dbReference type="EnsemblBacteria" id="ADO56708">
        <property type="protein sequence ID" value="ADO56708"/>
        <property type="gene ID" value="PPSC2_12830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2731"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_0_9"/>
    <dbReference type="OMA" id="WLAVMNG"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="276"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="4">
        <location>
            <begin position="463"/>
            <end position="565"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="570" mass="65330" checksum="212676FB746CFFDF" modified="2011-01-11" version="1">MTLKKRIFLLFFLSAFIPFISIFAISYYTIDSIFVNKINDGIRSNLQQVTSSLENSITNLNHVTQQLSYSGTLGKKLDEVLQPSSNIIELIEARDELKNELNVVTFTNPNIGLTLYYFQKEGATQFANFPIKDRFAPESLPVLFKSYGISYYGPHISMNRFNDQLVLSAMRKVQLPQRDDVYIYVESGFRLTQNILGYNQYQGALSHLILNGEGQIVYSEIPETMKVGENFFNLSKSTAKDGISRDYHWFKEDSAQNWSVISVISQAKYQQEKNQWLLQILLVALFFLGFTVFLAWLLWKMVYKPLGLFHSEINGMSQNPQKAGSQTRTHIPEFDFLLGEFSNMQHQIGDLFKEVQQKEKIRADLEVEKLLYQINPHFLMNTLDTVHWLAVMNGQGEIDKLVQSLNKLLYYNLGKLGQVSTMEEEIDALRQYLVLQQIRYDFEFDVRISADDHVLQIPVPRFILQPLVENSLYHGLSDEGFIQIEVTLTKTLNILIQDNGAGMTEEAIQKLLNNRIAEHKKVGMGIGLNYVHRMLRAQYGDQAQLVIESELGTGTSILLILPIKGEDVRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L3</accession>
    <name>E3E6L3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58273.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4323"/>
    <dbReference type="EnsemblBacteria" id="ADO58273">
        <property type="protein sequence ID" value="ADO58273"/>
        <property type="gene ID" value="PPSC2_20210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4307"/>
    <dbReference type="eggNOG" id="ENOG5030GF1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_986391_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58273.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="28738" checksum="B26428384983E85A" modified="2015-05-27" version="2">MNHRTNHSPKDKKIARRNLSNTVPSPRVNKEKTASPAGSPRPTQRGTAKVPVPVEKDTPVQAIEEAAWKKHKLPKTLEEAMQMNRASVLLLSVPDSDTEYGTDHDMASMKTEGQTEQDSLLDCSITSIHIAEGRQRSKQRMRLPEQDTHLVSQTEKELGRNAIHVGSVTDDGTTDSEVTLPQFGSTSFYLSAQEVTSKVNVVFDKPFIDTQYAITANASVPGVIVSVTQRQRHSAVLTVERRQPGQICEGWILWIAMGTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E711</accession>
    <name>E3E711_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5 7">50S ribosomal protein L16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 10" type="primary">rplP</name>
        <name evidence="10" type="ORF">PPSC2_22400</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 7">Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 7">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432576.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09865"/>
    <dbReference type="EnsemblBacteria" id="ADO58713">
        <property type="protein sequence ID" value="ADO58713"/>
        <property type="gene ID" value="PPSC2_22400"/>
    </dbReference>
    <dbReference type="GeneID" id="66575587"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4749"/>
    <dbReference type="eggNOG" id="COG0197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078858_2_1_9"/>
    <dbReference type="OMA" id="KGAVEYW"/>
    <dbReference type="OrthoDB" id="1786618at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01433">
        <property type="entry name" value="Ribosomal_L16_L10e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01342">
        <property type="entry name" value="Ribosomal_L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016180">
        <property type="entry name" value="Ribosomal_L10e/L16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036920">
        <property type="entry name" value="Ribosomal_L10e/L16_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000114">
        <property type="entry name" value="Ribosomal_L16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020798">
        <property type="entry name" value="Ribosomal_L16_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12220">
        <property type="entry name" value="PTHR12220"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00252">
        <property type="entry name" value="Ribosomal_L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00060">
        <property type="entry name" value="RIBOSOMALL16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54686">
        <property type="entry name" value="SSF54686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01164">
        <property type="entry name" value="rplP_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00586">
        <property type="entry name" value="RIBOSOMAL_L16_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00701">
        <property type="entry name" value="RIBOSOMAL_L16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L16" evidence="9">
        <location>
            <begin position="4"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="16199" checksum="DA6DDB5F80FE099D" modified="2011-01-11" version="1">MLVPKRVKHRKQQRGHMKGRAKGGTTLNFGEYGLQATEPAWITNRQIEAARIAMTRYIKRGGKVWIKIFPDKPITQKPLEVRMGSGKGNVEKWVAVVKPGKIMFELAGVPEEIAREAMRLAAHKLPIKTKFVKREELGGEANEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E759</accession>
    <name>E3E759_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">Threonylcarbamoyl-AMP synthase</fullName>
            <shortName evidence="7">TC-AMP synthase</shortName>
            <ecNumber evidence="4 7">2.7.7.87</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">L-threonylcarbamoyladenylate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ywlC3</name>
        <name evidence="10" type="ORF">PPSC2_23335</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP + hydrogencarbonate + L-threonine = diphosphate + H2O + L-threonylcarbamoyladenylate</text>
            <dbReference type="Rhea" id="RHEA:36407"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="ChEBI" id="CHEBI:73682"/>
            <dbReference type="EC" id="2.7.7.87"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the SUA5 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.87" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373450.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10825"/>
    <dbReference type="EnsemblBacteria" id="ADO58914">
        <property type="protein sequence ID" value="ADO58914"/>
        <property type="gene ID" value="PPSC2_23335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4941"/>
    <dbReference type="eggNOG" id="COG0009">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031397_0_0_9"/>
    <dbReference type="OMA" id="GMLKSHY"/>
    <dbReference type="OrthoDB" id="1913202at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003725">
        <property type="term" value="F:double-stranded RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061710">
        <property type="term" value="F:L-threonylcarbamoyladenylate synthase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017945">
        <property type="entry name" value="DHBP_synth_RibB-like_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038385">
        <property type="entry name" value="Sua5/YwlC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005145">
        <property type="entry name" value="Sua5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010923">
        <property type="entry name" value="T(6)A37_SUA5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006070">
        <property type="entry name" value="YrdC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03481">
        <property type="entry name" value="SUA5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01300">
        <property type="entry name" value="Sua5_yciO_yrdC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004930">
        <property type="entry name" value="Tln_factor_SUA5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55821">
        <property type="entry name" value="SSF55821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00057">
        <property type="entry name" value="TIGR00057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51163">
        <property type="entry name" value="YRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="YrdC-like" evidence="9">
        <location>
            <begin position="86"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="255"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="270"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="315"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR004930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR004930-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="44945" checksum="503EFAD8C9F40702" modified="2011-01-11" version="1">MSDKVNQMHDLHAGFVKKEIAEQEQALQPSHTHWWDVRCLVSDEDTTIPATLSFEVEKAASVGSVNNTDGDDPDELSAGQALITAEKGIREAAVLLQAGETVAFPTETVYGLGADARSTKAVEAVFAAKGRPSDNPLIVHISDAAQLKGMVAEINDTARALMNTFWPGPLTLVLPVVSQALSSRVTAGLDTVGVRMPDHPIALRLIAEAGCPLAAPSANRSGRPSPTLAQHVLEDLKGRIGGILDGGPTGVGLESTVVQVGDEGTVTILRPGGVTAEQLATVARSVVLDPALAHTPGQDADSLAPRSPGMKYTHYAPRGRLSVVQGPSSVEVTGWIRAALAEATARGERTAVLAFDDHAAGYAGERVYTLGKLDALHEAAQRLYSVLRRCDEDGVTYILAEACPPKGLGDAVMNRLLKAAGHRIIRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E776</accession>
    <name>E3E776_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AsnC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp3</name>
        <name evidence="5" type="ORF">PPSC2_23420</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373467.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10910"/>
    <dbReference type="EnsemblBacteria" id="ADO58931">
        <property type="protein sequence ID" value="ADO58931"/>
        <property type="gene ID" value="PPSC2_23420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4958"/>
    <dbReference type="eggNOG" id="COG1522">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_091233_3_1_9"/>
    <dbReference type="OMA" id="PEIVSCF"/>
    <dbReference type="OrthoDB" id="1844486at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="16584" checksum="190643E74471FDA8" modified="2011-01-11" version="1">MQHQMDDIDHKIMKLLQHDARITISQISKEISMSQPSVKERMTKLEERGIISGYNAVFNLRELNRGTTTFILVKTEHCQELIDFCKAAKEVTDLFRISGEFNYLIKVQSSSVEEIAEFQDSLVKLGPSKSHICMKNILENRVLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7H1</accession>
    <name>E3E7H1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">6-phospho-beta-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydhP</name>
        <name evidence="5" type="ORF">PPSC2_24580</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59182.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886151.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12060"/>
    <dbReference type="CAZy" id="GH1">
        <property type="family name" value="Glycoside Hydrolase Family 1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59182">
        <property type="protein sequence ID" value="ADO59182"/>
        <property type="gene ID" value="PPSC2_24580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5207"/>
    <dbReference type="eggNOG" id="COG2723">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001859_0_1_9"/>
    <dbReference type="OrthoDB" id="654705at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018120">
        <property type="entry name" value="Glyco_hydro_1_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="PTHR10353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00572">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59182.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="469" mass="54314" checksum="F8A4B43826624FD3" modified="2015-05-27" version="2">MKDTEQQAIQYCFPSDFWWGSSASATQTEGTVEGDGKGPNIWDYWFEQEPNRFYDGVGPGDTSRFYTRYKEDIALMKELGHNSFRFSISWSRLFPAGRGELNQKAVQFYNAVIAELHEAGIEPFVNLYHFDLPMALQEKGGWVNRETVEAYVDYTNTCFELFGDRVAKWFTHNEPIVPVEGGYLYDFHYPNEVDFGKAVQVGYHTLLSSASAIKAYKEGGYKGKIGIILNLTPTYPRSQHPADVQAAEICDAFFNRSFLDPSVTGEFNPLLVKLLRQEGFVPNMEDGDREIIRQGTVDLLGINYYQPRRVKARESLPNPDAPFVPERFFDYYAMPGRKMNEMRGWEIYEKGIYDILTNVRENYGNIECFISENGMGVQGEEKFRDENGMIHDDYRIDFIREHLKWVQRAISEGSNVKGYHLWTFMDNWSWTNAYKNRYGFVSVDLQNEGKRSVKQSGHWFKQVIENNGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Z9</accession>
    <name>E3E7Z9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Xylanase deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_14755</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371708.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02390"/>
    <dbReference type="EnsemblBacteria" id="ADO57112">
        <property type="protein sequence ID" value="ADO57112"/>
        <property type="gene ID" value="PPSC2_14755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3149"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021264_1_0_9"/>
    <dbReference type="OMA" id="MNWTYGY"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0858">Xylan degradation</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168703" evidence="2">
        <location>
            <begin position="28"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="3">
        <location>
            <begin position="116"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="308" mass="33781" checksum="192C4C6434949532" modified="2011-01-11" version="1">MGTKTAAILLTACLLLSACTATKPESADSSNHQDSVTSNSSNSAKGQSSISSPKGSSKQADSDEQKSVSTTNTQNDKTAVESNGTTVSTTAVTTNKMYHLDKAYNVIPNQQGAEKRVVLLTFDDGPKEAVMINKIIDILDKHKAKAIFFVNGYRVKEHPELLKLIHDRGQPIGNHSWDHIVLKNKSEAEVKKQIETVQKIVKDTTGQAPVFFRPPHGAGGDVGRKVAKENGLLYMTWSVGSLDWTMKKNQPHKTETLLKNVTEQLHPGSNILMHELPWTVEALDSLLTRLEQKGYQFVDPQSIEIPAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8N2</accession>
    <name>E3E8N2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_010345209.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57741">
        <property type="protein sequence ID" value="ADO57741"/>
        <property type="gene ID" value="PPSC2_17705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3785"/>
    <dbReference type="eggNOG" id="COG3655">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_31_3_9"/>
    <dbReference type="OMA" id="MRISDVM"/>
    <dbReference type="OrthoDB" id="2040098at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13443">
        <property type="entry name" value="HTH_26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="25"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8682" checksum="4B4EC73CADB361E9" modified="2011-01-11" version="1">MNVIKCNIRELMAEHRIDDITELMAKSGLSRNSINKLYRETNIETTKLETLFKLCDTFNCKLSDLIEYVPEENQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8P8</accession>
    <name>E3E8P8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ADP-ribosylglycohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">draG</name>
        <name evidence="1" type="ORF">PPSC2_17780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372337.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05065"/>
    <dbReference type="EnsemblBacteria" id="ADO57757">
        <property type="protein sequence ID" value="ADO57757"/>
        <property type="gene ID" value="PPSC2_17780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3800"/>
    <dbReference type="eggNOG" id="COG1397">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024566_8_2_9"/>
    <dbReference type="OMA" id="PQPRWID"/>
    <dbReference type="OrthoDB" id="1661477at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.4080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005502">
        <property type="entry name" value="Ribosyl_crysJ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036705">
        <property type="entry name" value="Ribosyl_crysJ1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03747">
        <property type="entry name" value="ADP_ribosyl_GH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101478">
        <property type="entry name" value="SSF101478"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="33673" checksum="10F76C4B3FEC38F7" modified="2011-01-11" version="1">MALIKDRFYGSLAGLAVGDALGTTVEFSSPGTFEPVTDIVGGGVFGLKPGQWTDDTSMALCLAESMVQKDSFDPADQMRRYTNWYHLGYMSSTGTCFDIGGATRAALHRFEATGEPYSGSVDPMTAGNGSIMRLAPVAMAYANRPEEAVMYAELSSRTTHGAVESVEACAVLASILVAGLRGADKESMLSADICYKWRRQEQPAYSAAIEEIIQGSYKDKEPPEIQGTGYVIRSLEAALWAFHHSTSFEEGALLAVNLGDDADTTGAVYGQIAGAYYGQSGIPSHWLEKLAMKETIDELTEALWQKADKGQIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8T3</accession>
    <name>E3E8T3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372372.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3839"/>
    <dbReference type="EnsemblBacteria" id="ADO57792">
        <property type="protein sequence ID" value="ADO57792"/>
        <property type="gene ID" value="PPSC2_17950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3836"/>
    <dbReference type="HOGENOM" id="CLU_2918386_0_0_9"/>
    <dbReference type="OrthoDB" id="2199261at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="6787" checksum="8C5351B80A1A1A18" modified="2011-01-11" version="1">MAMGRIQGVAPKEKAQTFLLAKLKFDVIMILGLLLKRQNPGHGTGFPCVGFCLFFLYTDLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8W0</accession>
    <name>E3E8W0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">D-aminoacyl-tRNA deacylase</fullName>
            <shortName evidence="1">DTD</shortName>
            <ecNumber evidence="1">3.1.1.96</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Gly-tRNA(Ala) deacylase</fullName>
            <ecNumber evidence="1">3.1.1.-</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1" type="primary">dtd</name>
        <name evidence="2" type="synonym">dtD</name>
        <name evidence="2" type="ORF">PPSC2_19135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a D-aminoacyl-tRNA + H2O = a D-alpha-amino acid + a tRNA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13953"/>
            <dbReference type="Rhea" id="RHEA-COMP:10123"/>
            <dbReference type="Rhea" id="RHEA-COMP:10124"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:59871"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:79333"/>
            <dbReference type="EC" id="3.1.1.96"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>glycyl-tRNA(Ala) + H2O = glycine + H(+) + tRNA(Ala)</text>
            <dbReference type="Rhea" id="RHEA:53744"/>
            <dbReference type="Rhea" id="RHEA-COMP:9657"/>
            <dbReference type="Rhea" id="RHEA-COMP:13640"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="1">A Gly-cisPro motif from one monomer fits into the active site of the other monomer to allow specific chiral rejection of L-amino acids.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the DTD family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.96" evidence="1"/>
    <dbReference type="EC" id="3.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372633.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06335"/>
    <dbReference type="EnsemblBacteria" id="ADO58058">
        <property type="protein sequence ID" value="ADO58058"/>
        <property type="gene ID" value="PPSC2_19135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4100"/>
    <dbReference type="eggNOG" id="COG1490">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076901_1_0_9"/>
    <dbReference type="OMA" id="GVFQAHM"/>
    <dbReference type="OrthoDB" id="1862614at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051499">
        <property type="term" value="F:D-aminoacyl-tRNA deacylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106026">
        <property type="term" value="F:Gly-tRNA(Ala) hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043908">
        <property type="term" value="F:Ser(Gly)-tRNA(Ala) hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019478">
        <property type="term" value="P:D-amino acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00563">
        <property type="entry name" value="Dtyr_deacylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00518">
        <property type="entry name" value="Deacylase_Dtd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003732">
        <property type="entry name" value="Daa-tRNA_deacyls_DTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023509">
        <property type="entry name" value="DTD-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10472">
        <property type="entry name" value="PTHR10472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02580">
        <property type="entry name" value="Tyr_Deacylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69500">
        <property type="entry name" value="SSF69500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00256">
        <property type="entry name" value="TIGR00256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0820">tRNA-binding</keyword>
    <feature type="short sequence motif" description="Gly-cisPro motif, important for rejection of L-amino acids" evidence="1">
        <location>
            <begin position="137"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="15979" checksum="C35C7899DF383508" modified="2011-01-11" version="1">MKIIIQRCKDAQVTVNQKVVGKIGTGLMLLVGIGQGDTAADAVYLADKTAGLRIFEDAEGKMNDSVLDVGGAILSVSQFTLYGDCRKGRRPNFMGAAKPEEAEKLYDFFNSQLRAKGLEVETGIFGAMMDVSLTNWGPVTLILDSERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E951</accession>
    <name>E3E951_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aldo/keto reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO59258">
        <property type="protein sequence ID" value="ADO59258"/>
        <property type="gene ID" value="PPSC2_24905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5278"/>
    <dbReference type="eggNOG" id="COG0667">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_1_9"/>
    <dbReference type="OMA" id="DAAKPHG"/>
    <dbReference type="OrthoDB" id="1054546at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="16"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="36527" checksum="B51B44C9B021BC78" modified="2011-01-11" version="1">MKKKQLGNSELQVSALGLGCMGMSEYYGELDDQESIKTLHRALELGINFWDTADVYGVGKNEKLISQVLRSHRDEVVLATKFSIMRGEDGGFMGVSGRPEYVKQACDRSLQRLGVDVIDLYYQHRVDPNVPIEETVGAMSDLVQAGKVRYLGLSEASPALIRRAHKVHPITALQTEYSLWSREAEDEVIPTCKELGIEFVAYSPLGRGFLSGQIQKFDDFAEDDFRRTVPRFQPENFQKNLDLVQHVKDLAAQKGVKPSQLALAWLLAQEGIVPIPGTKRVTYLEENAGAVNVGLSAEEMETINAIIPKGMAAGLRYPAERMPNWQAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E999</accession>
    <name>E3E999_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_15980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57372.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57372">
        <property type="protein sequence ID" value="ADO57372"/>
        <property type="gene ID" value="PPSC2_15980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3414"/>
    <dbReference type="HOGENOM" id="CLU_2410506_0_0_9"/>
    <dbReference type="OrthoDB" id="1889484at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57372.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10761" checksum="16EAF5EEE0FFABCB" modified="2015-05-27" version="2">MSPIFIASLMIMGIFLFQAALILGIIHWVSKRTKRPAQTKMYLTVGLLVFISCFLVWDNWIHLQELNGWTMISLVVIMISAYIQLRKQKEKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9W0</accession>
    <name>E3E9W0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase M23</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoIVFA</name>
        <name evidence="3" type="ORF">PPSC2_19375</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372667.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06575"/>
    <dbReference type="EnsemblBacteria" id="ADO58093">
        <property type="protein sequence ID" value="ADO58093"/>
        <property type="gene ID" value="PPSC2_19375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4134"/>
    <dbReference type="eggNOG" id="COG4942">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075789_0_0_9"/>
    <dbReference type="OMA" id="MSHRADE"/>
    <dbReference type="OrthoDB" id="1891666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M23" evidence="2">
        <location>
            <begin position="188"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="31267" checksum="8AF7A007D11B995F" modified="2011-01-11" version="1">MDKNSGIKQRRKERIQQLIEGNKAEAYSSGIDQNRYGYREMKSMPVVSANSPRDPETEWKNDRQRWQQSFGANRGPSFWSSFWRRTVIAAVLFGVVWGLFRWDIPYAVNLRMFVADALNKDMDFAAAGQWYKTYFDGAPSFLPIFGEEHETKQVDASRKGSPPIEGNITQPFVLSLKGVEITPNVADNGAIAVKSIDAGRVLDVLNHPKSGISVTIRHTGGITATYGRLSRSTLKVNDWVQEGEEIGVLPASHGGSEAATLFLAIQRGDQYIDPSEVVALD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9W4</accession>
    <name>E3E9W4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">Cell shape-determining protein MreC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4 5">Cell shape protein MreC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mreC</name>
        <name evidence="6" type="ORF">PPSC2_19395</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in formation and maintenance of cell shape.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the MreC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372671.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06595"/>
    <dbReference type="EnsemblBacteria" id="ADO58097">
        <property type="protein sequence ID" value="ADO58097"/>
        <property type="gene ID" value="PPSC2_19395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4138"/>
    <dbReference type="eggNOG" id="COG1792">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042663_1_1_9"/>
    <dbReference type="OMA" id="NPFTHRI"/>
    <dbReference type="OrthoDB" id="837894at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042177">
        <property type="entry name" value="Cell/Rod_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042175">
        <property type="entry name" value="Cell/Rod_MreC_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007221">
        <property type="entry name" value="MreC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34138">
        <property type="entry name" value="PTHR34138"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04085">
        <property type="entry name" value="MreC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038471">
        <property type="entry name" value="MreC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00219">
        <property type="entry name" value="mreC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0133">Cell shape</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00032089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR038471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="30207" checksum="4F8A96CDBD1E1A67" modified="2011-01-11" version="1">MIGIVLFIALMGITLGQRNSLTWPEKFARDSIGFVQGIFYRPASAIAGFFEDIGNMRSIYEENERLKIAVAKLTRDQIQTHNYVETNARLQNELKFTQTQKAKNNYDYRVAQVNSVSNDSKTLVIDIGEKDGAKVGQEVSSLEGFVGVISRTGNFTSTVTLLTTLDPKNPNSYAIAATVLGKENQSFGMIESYDPGTNTFQMTRIEEKDPIAKGDQIITSGAGGKFRKNLMIGTVEKIQVGEFGKTRTAIIKPAASFVDWKELLVLYTPEVPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA61</accession>
    <name>E3EA61_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cell division protein FtsI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pbp3</name>
        <name evidence="7" type="ORF">PPSC2_20565</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transpeptidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372923.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07820"/>
    <dbReference type="EnsemblBacteria" id="ADO58353">
        <property type="protein sequence ID" value="ADO58353"/>
        <property type="gene ID" value="PPSC2_20565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4386"/>
    <dbReference type="eggNOG" id="COG0768">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009289_1_1_9"/>
    <dbReference type="OMA" id="TQYEMGS"/>
    <dbReference type="OrthoDB" id="423699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005311">
        <property type="entry name" value="PBP_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036138">
        <property type="entry name" value="PBP_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03717">
        <property type="entry name" value="PBP_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56519">
        <property type="entry name" value="SSF56519"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="7" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="26"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_dimer" evidence="6">
        <location>
            <begin position="68"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="5">
        <location>
            <begin position="329"/>
            <end position="665"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="265"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="693" mass="78067" checksum="A26A25DF1E736920" modified="2011-01-11" version="1">MRKMDNEQGKDNETSDRKRFSFRINLFFFSSFIIFTVIIVRLAILQFVDGPQLKQQEASNVTKNVPLTPIRGTIYDSTGQNRLAYSTPVQSLYITLSKNYSDGMEEKRDNDKKLLPELEKMTQKLANRFAEYGNKDEPKMTPEQIMDAMDRNYQRFSGFTPRLIKTNLTPEEVAYFMEHKSEFPGVDVVEETVRHYDPDTVAVQTVGYIKSYKSARETLDKYKNIQKSMSAENDPGLIYMDNESVGFDGLEYQYQEQLRGKNGYKTVPIDPRNMPEGVDSVTPPQKGDNVYSTINKEIQVKTENAIMDQLRWLHTHAVSGRTHPYAKTGFAVAMEVDTGNVVAMASMPDYDANYWQTGTISKDKYEEIKHVYQNATIKNVGSGQSGQHPDSTVLLGSTIKPLSVLIGLEEGLFTTNTYYQDTGAAYFGRNNSARVRNSSGHVYGSMDPATAIRHSSNAFMVDMVGKRLYNKYRNNATEDQGINVWDRYMKEFGLGVSTGVDLPGEFRGWREYTNKSESVLSRLAYASFGQQGKYTPMQLAQYTTMIATKGKRMEPHLVSQIKDTNGNVVQTFKPKVLNEVKFPDAYWNEVIRGMATDVSAFKGFPYDFARKTGTSQQSVGRELKDNGVFIAFAPRQNPKLAVAVVIPEGGFGAWSAGPVARKIFDAYDEVYGLDGVPKKKEATATDPNTTKQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAA6</accession>
    <name>E3EAA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">PTS fructose transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">licR3</name>
        <name evidence="7" type="ORF">PPSC2_20780</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372967.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08025"/>
    <dbReference type="EnsemblBacteria" id="ADO58398">
        <property type="protein sequence ID" value="ADO58398"/>
        <property type="gene ID" value="PPSC2_20780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4431"/>
    <dbReference type="eggNOG" id="COG1762">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3711">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013442_5_1_9"/>
    <dbReference type="OMA" id="EIAYITI"/>
    <dbReference type="OrthoDB" id="1382729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00211">
        <property type="entry name" value="PTS_IIA_fru"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007737">
        <property type="entry name" value="Mga_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011608">
        <property type="entry name" value="PRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036634">
        <property type="entry name" value="PRD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016152">
        <property type="entry name" value="PTrfase/Anion_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002178">
        <property type="entry name" value="PTS_EIIA_type-2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013011">
        <property type="entry name" value="PTS_EIIB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05043">
        <property type="entry name" value="Mga"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00874">
        <property type="entry name" value="PRD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00359">
        <property type="entry name" value="PTS_EIIA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
        <property type="entry name" value="SSF52794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55804">
        <property type="entry name" value="SSF55804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63520">
        <property type="entry name" value="SSF63520"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51094">
        <property type="entry name" value="PTS_EIIA_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51099">
        <property type="entry name" value="PTS_EIIB_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PRD" evidence="6">
        <location>
            <begin position="184"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="6">
        <location>
            <begin position="301"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-2" evidence="5">
        <location>
            <begin position="412"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-2" evidence="4">
        <location>
            <begin position="504"/>
            <end position="645"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="648" mass="73032" checksum="40F29633B12C3FD0" modified="2011-01-11" version="1">MNARMVSILQHLLAADAPVKSDYLAKLIQVTSRTIRSDIRELDEFLSKHGAAIEPVRSRGYELKITDNRSFRALLQQLFLSGEPDDPGSPGYRQLYLIKRLLLADHYVKLEDLADELYISKSTVQNDFKEVKQTLQGYGITIDKRPNYGVKLKGDEVQLRFCLSEFIVSRSEEQGGTLHAALRIVTPHEMTLICGIVLEQTQKYEVTLSDIAFSNLSIHIAIACKRIRDGNQVAMLSTEIGDLRGTDEFRAAEHIVGLIEKELQLSFPEDEIAYIAMHLAGNKWFVGIEGQQIEDMGPEKLLDWNIYELGKEMLAEIDRDLNLNISRDMELLIGICLHLKPALNRVKYGMNIRNPMLEHVKSNYSLAFQAGVIGAKLVESKLNIAIPEAEMGYLAIHIGAAIERQRMNTRPKRCLVVCTSGVGSARLLKYKLQSTFGSSLEVAGTTEYYKLQQVPLHDIDFVVSTIPIQLPLSVPVVVVQTLLGGSDMDKIGSLLAGEAEFDFHYIREELVFLRQNFTTKEEVISFLGQKIYAEGLIRSAEGFIGLVLEREQAAPTAYGNLVAVPHPIIPQSNQTVWAVCTLQQPIEWGDKPVQFICLLSIERNGKEPPSKMYNHLMELVDNSDIVQQMLKCETYEEFSRIIVKYKLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAB3</accession>
    <name>E3EAB3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cadA</name>
        <name evidence="11" type="ORF">PPSC2_21485</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58531.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08680"/>
    <dbReference type="EnsemblBacteria" id="ADO58531">
        <property type="protein sequence ID" value="ADO58531"/>
        <property type="gene ID" value="PPSC2_21485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4568"/>
    <dbReference type="eggNOG" id="COG2217">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001771_6_4_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019829">
        <property type="term" value="F:ATPase-coupled cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027256">
        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00941">
        <property type="entry name" value="CDATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01525">
        <property type="entry name" value="ATPase-IB_hvy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-1278">Translocase</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="46"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="121"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="271"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="302"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="615"/>
            <end position="632"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU362081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58531.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="660" mass="70860" checksum="8AF17609D4097714" modified="2015-05-27" version="2">MQAVQRLQDTLSPSNRALTKNSGSGRPGPNRKPQFQLKSMLKNKEMQAALGSGMLMLMAWGVSHWWQWLSVILYVVSYALGGWSKAREGIETLIREHDLDVNLLMIAASLGAAAIGYWNEGAMLIFIFALSGALESYTTERSSKDISELMALKPETALRLSHEGTETVGIEQLLPGDLLLVKPGELIPADGRVSKGVSAVNQASITGESVPVNKMAGDEVYAGTINGEGVLYVEVSQSSEDTLFSKIIRMVEEARTEVPDSQRFIKTFESVYARIVVAVTLIVIVGAPIVLGWTWAAAFYKAMVFLVVASPCALVSSIMPVMLSAISNRARRGILFKGGAHVENMALTSVVAFDKTGTLTKGSPVVTDWITAPDYDADELLHIVATIESYSLHPLARAIVAKAEAELGQRELLTAEQVQALTGWGMEGIIGGVKWKIGRTNVLDEPGLLAGPEWVESRARLEAEGKTVSIILADDRIAGMLALRDELRPQAQESVKRLQAQGIRVVMLTGDRPETAAVIAAQAGVDAVYAGLMPEDKVSHIRMLREQYGHVVMVGDGVNDAPALTAATVGLGMGMHGSGAALEVADVVLMNDGIEEIAPTIALARKAQRVVKQNMIFAVSVIVLLVISNFVQDIALPFGVIGHEGSTLLVILNGLRLLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAF4</accession>
    <name>E3EAF4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">macB2</name>
        <name evidence="8" type="ORF">PPSC2_21685</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373139.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4624"/>
    <dbReference type="EnsemblBacteria" id="ADO58572">
        <property type="protein sequence ID" value="ADO58572"/>
        <property type="gene ID" value="PPSC2_21685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4610"/>
    <dbReference type="eggNOG" id="COG0577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010964_1_0_9"/>
    <dbReference type="OMA" id="RHTEFWY"/>
    <dbReference type="OrthoDB" id="856767at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="26"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="274"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="329"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="372"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="445"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="718"/>
            <end position="742"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="773"/>
            <end position="796"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="811"/>
            <end position="837"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="7">
        <location>
            <begin position="306"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="7">
        <location>
            <begin position="750"/>
            <end position="837"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="850" mass="94699" checksum="A919F1637AA7E3E6" modified="2011-01-11" version="1">MIKVKNSKAVRNLSDKSFKANKIRNIIAIIAIALTTLLFTSVFTMGIGAMESFQQATMRQAGGGGQGILKYINEEEFNHIKDHPLIKEIAYSRLLSEKVTNEQFLKRRAEFWYHDDLGLKLGLIELEKGHKPVAENEVISDSSTLQLLGIPLKEGAPLTLKLEVHGKMVQREFILSGWWKSDPAAMIARGQIYASKAYVDAHAEELRYTYKQDHDMTGAINADIMFDNSSNMRENLNKVITESGYSLDQNAPNYIASSVNWAYLSNTFSSNPEAVFPLATGLLLIMLTGYLIIYNIFQISVMRDIRFYGLLKTIGTTSRQISRIIRRQALFLSLIGVPIGLLGGFGVGKSLIPLLLMNNYRHAEVTLSPNPWIFIDSALFAVVTVMISAYKPSRIAATVSPIEAVRYVDGATKKGKKKLKKSTNGAKMPLMARVNLGRNKKRTTLVLLSLSLGLVLLNTTFTLSQSLDMNKYVSKSHDTDFLIAHADYFQEHFTGPDNATTESYIQAVQAQPGFEEGGRLYSGSNLFTVEHKENKEGMKLYGEIVTPDARGNLSAIVYGLEDLPLHRLQLIDGELDYGKLASGKYILEGVRLDNYDNPEMELSVYKVGEKVTLHKYMGTANAQEYTSHEFTVLGHVGVKSSNSGVAVASYTDFYLPADIYKTLVKKPVIMSYAFNVSDSKEKTMENFIKNYTEIKEPVMDYRSKSTVIAELSGMQKTILMIGGTLSIIIGVIGIVNFANALLTSILTRHQEFAILQSIGMTNKQLKTMLVYEGMYYVLGTSICSILLGSLLSVLIAKPLSAQIWFMSYKFIIWPLILMLPVLLVLGICLPLAIYSLSDRKTIVERLRTAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAI4</accession>
    <name>E3EAI4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_21820</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373169.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4655"/>
    <dbReference type="EnsemblBacteria" id="ADO58602">
        <property type="protein sequence ID" value="ADO58602"/>
        <property type="gene ID" value="PPSC2_21820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4642"/>
    <dbReference type="eggNOG" id="ENOG50334F9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1218797_0_0_9"/>
    <dbReference type="OMA" id="LFVNYQG"/>
    <dbReference type="OrthoDB" id="1234594at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168750" evidence="2">
        <location>
            <begin position="39"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="226" mass="24319" checksum="E08DFD2E0FF2B783" modified="2011-01-11" version="1">MPKKHESDNYKMSRRLSLTAILLTLTFVALTGCGQDNNAEPSDAGSSTSMIENSAGGNQNGSAQSDKAVKESKSAENSGTDAQKSAPSAPATSSDTSSPAAPNASQNPFEVAGIQDPKAFLDTFKALQKAVADNDKEKVANYILYPLRVNDSEKSLTIPNKKDFLAKYDQIFTDAIREALVNQKTDDLFVNYQGVMVGSGELWLRRATDNPKQFGVFSINLETVAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAV0</accession>
    <name>E3EAV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Beta-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_23815</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the glycosyl hydrolase 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59014.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886066.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11320"/>
    <dbReference type="CAZy" id="CBM6">
        <property type="family name" value="Carbohydrate-Binding Module Family 6"/>
    </dbReference>
    <dbReference type="CAZy" id="GH3">
        <property type="family name" value="Glycoside Hydrolase Family 3"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59014">
        <property type="protein sequence ID" value="ADO59014"/>
        <property type="gene ID" value="PPSC2_23815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5039"/>
    <dbReference type="eggNOG" id="COG1472">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004542_5_3_9"/>
    <dbReference type="OrthoDB" id="419160at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102483">
        <property type="term" value="F:scopolin beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009044">
        <property type="term" value="F:xylan 1,4-beta-xylosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1700">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044993">
        <property type="entry name" value="BXL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006584">
        <property type="entry name" value="Cellulose-bd_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005084">
        <property type="entry name" value="CMB_fam6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026891">
        <property type="entry name" value="Fn3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019800">
        <property type="entry name" value="Glyco_hydro_3_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002772">
        <property type="entry name" value="Glyco_hydro_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036881">
        <property type="entry name" value="Glyco_hydro_3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001764">
        <property type="entry name" value="Glyco_hydro_3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036962">
        <property type="entry name" value="Glyco_hydro_3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42721">
        <property type="entry name" value="PTHR42721"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03422">
        <property type="entry name" value="CBM_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14310">
        <property type="entry name" value="Fn3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00933">
        <property type="entry name" value="Glyco_hydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01915">
        <property type="entry name" value="Glyco_hydro_3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00133">
        <property type="entry name" value="GLHYDRLASE3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00606">
        <property type="entry name" value="CBD_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01217">
        <property type="entry name" value="Fn3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52279">
        <property type="entry name" value="SSF52279"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51175">
        <property type="entry name" value="CBM6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00775">
        <property type="entry name" value="GLYCOSYL_HYDROL_F3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0858">Xylan degradation</keyword>
    <feature type="domain" description="CBM6" evidence="7">
        <location>
            <begin position="839"/>
            <end position="962"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59014.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="973" mass="107548" checksum="D5C4754B460F55BE" modified="2015-05-27" version="2">MSHETTGIEYLFQDPKIHLDERVRDLVSRLTLEEKIESMLQYQPAIDRLGVAAYKHGTEAAHGIAWLGEATSFPQPVGLACTWDTELMRQIGSVIADEARVYYRRDPKLNGLTLWAPTVDMERDPRWGRNEEAYGEDPYLTGELSKELVKGIQGDHPVYLKAVATLKHFLGNNNEVDRGVGSSSIDPRNLREYYLRAFEKPFTEGGAQSMMTSYNLINGTPATLYHGVNDIVRGEWGMDGFVVSDAGDVMGIVNDHQYYDSHTPGVAESIRAGIDSITDDAELSKQAIREALEQGSLQEEDLDRALFHTFRVRFRLGEFDPAADNPYASIGEEALMTEQARELSLRAAREQIVLLKNEQEFLPLNPAQCGKVAVIGSHGNEVFRDWYSGTLPYRVTPLEAIRAKLESGGAEERVVYSDAKDRVTLTAATDGVKITVNSSGDMRLSQNGEPTVLTITDWGYGSVTLHDEHLGTYVTSDEETLRVTADEAYGWYVKEVFGLTPVEQGEHLWTTWNGKSVIAGTEGLLKVMESASPAPNASDFNHTTFRIETVSDGLAEAIAAAQAADTAIVFVGNHPLINGKEENDRPGLELAASQQRLIEEVYRVNPNTIVVLTGSYPFAIPWLQEHIPAIIYTSHAGQEHGTAIADVLFGDYAPAGRLNMTWVQSEDQLGDIKDYDIIRSGRTYQYFEGEPLYPFGHGLTYSPFEYSDLHTDAHKDNVKSMATLDAADTLQVRVDVTNRGESAGEEVVQLYVRSGASRVKRPLKTLCGFQRIRLEPGETRTIIFTVRVKDWAIWDVTRDGYCVESGEYTLLAGASSADIRLEHPVYVRGEVIPPRQAGPRIRAENFDDCFDILLDESKEQKEACVRPRSPQRSGWIAFHGVDMNTVSVVELQCRVSGNSSDAAIELHLDAPDSPAVSRINVGNTGGAQAWVTLSEKVQSASGIRDVYLSLSGEVRLGHFTLGARDPEGSGFQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAV5</accession>
    <name>E3EAV5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373555.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59019">
        <property type="protein sequence ID" value="ADO59019"/>
        <property type="gene ID" value="PPSC2_23840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5044"/>
    <dbReference type="eggNOG" id="ENOG502ZV5K">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1516478_0_0_9"/>
    <dbReference type="OMA" id="CSWDREH"/>
    <dbReference type="OrthoDB" id="1815674at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="177" mass="21065" checksum="154E9C8DDA9D4B75" modified="2011-01-11" version="1">MDWKHWYRELEQDDETWDVSEEVVLRGVVHLDFCGQPSEVEVEFIVGADSEEQAQIIEEPTELQKKTWETYMACSSEIHPQVLESIHHYYVDIVEKYRKAYSSWGEDPNEYAPYVERPEQLLDRMQLISILISDSSEKDELYWNFSCSWDREHGLGVHLKQMKIEHIQGAYTLYDLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAW5</accession>
    <name>E3EAW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dps2</name>
        <name evidence="4" type="ORF">PPSC2_23880</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the Dps family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373565.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11385"/>
    <dbReference type="EnsemblBacteria" id="ADO59029">
        <property type="protein sequence ID" value="ADO59029"/>
        <property type="gene ID" value="PPSC2_23880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5053"/>
    <dbReference type="eggNOG" id="COG0783">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_098183_2_2_9"/>
    <dbReference type="OMA" id="NTQLSNW"/>
    <dbReference type="OrthoDB" id="1742631at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016722">
        <property type="term" value="F:oxidoreductase activity, acting on metal ions"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01043">
        <property type="entry name" value="DPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002177">
        <property type="entry name" value="DPS_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023188">
        <property type="entry name" value="DPS_DNA-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008331">
        <property type="entry name" value="Ferritin_DPS_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42932">
        <property type="entry name" value="PTHR42932"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00210">
        <property type="entry name" value="Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005900">
        <property type="entry name" value="Dps"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01346">
        <property type="entry name" value="HELNAPAPROT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00818">
        <property type="entry name" value="DPS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00819">
        <property type="entry name" value="DPS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ferritin" evidence="3">
        <location>
            <begin position="20"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17697" checksum="061565FD082C54ED" modified="2011-01-11" version="1">MSTLNHTNAPTQEAIQELHKALNRHVATWSVLYTKLHYFHWYVKGPKFFTLHAKFEELYNEATANLDTIAERLLAIGGRPAATLKEHLQLSAIQESAGEQTAEDMVKAVVADFKTITVELASGMEAAEAAQDKATEDLLNGLREEMDKHIWMLTAYLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAY9</accession>
    <name>E3EAY9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dhkJ</name>
        <name evidence="9" type="ORF">PPSC2_23990</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373588.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11495"/>
    <dbReference type="EnsemblBacteria" id="ADO59053">
        <property type="protein sequence ID" value="ADO59053"/>
        <property type="gene ID" value="PPSC2_23990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5076"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_114_44_9"/>
    <dbReference type="OMA" id="FQYDIAK"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="171"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="43711" checksum="4F016AEB939837A5" modified="2011-01-11" version="1">MTTSPTGFYNSIQEATAHVIDVLSDILHVNTIFIAANDGVINVIVDSFNREEVLVRNGEELPFELSYCSLVLNHSADHLTISETSIHPQTRDLDVTKTIGNHSFTGIPIRMKNGQGYGTICILDAPSAQLTETEMKALKAMAVFLGYVVELEKDKIDAEASSMSKLDLISSLSNKIRFSLTEIWGATDLMMTTELTEEQQQYMSIMEASSRSLMMLLNNILDYSKIESGQIDDIEDPFDLRTMMENVLSLYTEVAAQRNLELRLDWNLASSPIFIGDEAKIRRMLINLVDNAVKFTSTGSVTLSANTQFVTNAPEAELEVRVKDTGIGISPNKLKMWLEHDFGPSPSYGNPGLGWQITKQLLKRMNGTMTGVSEPGNGTEITLQFTLKTYQESA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-04-07" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB56</accession>
    <name>E3EB56_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373869.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5400"/>
    <dbReference type="EnsemblBacteria" id="ADO59336">
        <property type="protein sequence ID" value="ADO59336"/>
        <property type="gene ID" value="PPSC2_25250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5353"/>
    <dbReference type="HOGENOM" id="CLU_2024438_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="14200" checksum="4E0D21858A3EB23F" modified="2011-01-11" version="1">MTVKFTLNYTDGDFIETIEVPIYKAYREGTSFQLYHLNRNPARIEHKELLVIDESGIAPECMFKSVTEFCEKIIPYLLNRKNESLFLFGEYYDAEKDKMMDIDDIEIPCLIGGAATLQEEEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB65</accession>
    <name>E3EB65_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373878.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5409"/>
    <dbReference type="EnsemblBacteria" id="ADO59345">
        <property type="protein sequence ID" value="ADO59345"/>
        <property type="gene ID" value="PPSC2_25290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5362"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066193_4_1_9"/>
    <dbReference type="OMA" id="AYVACYW"/>
    <dbReference type="OrthoDB" id="1757088at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="181"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="302" mass="34493" checksum="1FC4B7853F3938F5" modified="2011-01-11" version="1">MDPLLHSLFRPLQVNGSDPYTYYIEQEPSAALRAYVACYWESGPVTKEVPEGNMRVSGREAVDRVLPDGCTDILLEYDPVSKHQELSYCGAFTHPFVSTRQAGSETRIFAVRFFPGGAHYFHGMPTHLFTGGNYRLEEIWPENVEIIGERILEARDFNERVRIMDQYLNQLLLSRRTSDCDLMKNLLHRIFMSGGSVGVKELAEREAISERQLNRKFGQWIGISPKKFSEVVRFQSVLHSIQSGGSVDWTGLALKHSFFDQAHLIRDFRRFYGASPLTAAKDFRKLSDFYNTRSGTPAILKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBD9</accession>
    <name>E3EBD9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_21875</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the band 7/mec-2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373180.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09020"/>
    <dbReference type="EnsemblBacteria" id="ADO58613">
        <property type="protein sequence ID" value="ADO58613"/>
        <property type="gene ID" value="PPSC2_21875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4653"/>
    <dbReference type="eggNOG" id="COG0330">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027197_1_1_9"/>
    <dbReference type="OMA" id="RLYWKGQ"/>
    <dbReference type="OrthoDB" id="809470at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043202">
        <property type="entry name" value="Band-7_stomatin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10264">
        <property type="entry name" value="PTHR10264"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHB" evidence="2">
        <location>
            <begin position="135"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="372" mass="43258" checksum="CFE9F80C92EA28DA" modified="2011-01-11" version="1">MFKKITIKADERGLLFKKGSYHKLLHPGTYLLKTFQQEAVEILNVSDPFFVPDHDIRLFLTDPLLLEQLTVIDVEDHEYVLHYEDNRFVELLTAGKYAFWNMLKEHRFVRADTRQPAIDKSLGQAFLSKTPGFWKALQVASHELGFLYYDNVLQGKLKPGKYYFWLSTVNTEIKTLDMRQQQMDLMGQEIMTEDKITLRLNFVCQYRIIDPLRALEFRAYEEQMYIMLQLLLREYVGTMKLDDLLKMKQEIAEYVLTRLNEQSDEYGVTFTSAGVKDIILPGDIKDILNTVLLAEKKAQANLITRREETASTRSLLNTAKLMDENATLYRLKELEFMEKICEKIGTISLTGGNTLLEQLNTLVHMKEGQGLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBK4</accession>
    <name>E3EBK4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Acetylornithine aminotransferase</fullName>
            <shortName evidence="2">ACOAT</shortName>
            <ecNumber evidence="2">2.6.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">argD</name>
        <name evidence="5" type="ORF">PPSC2_22915</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2-oxoglutarate + N(2)-acetyl-L-ornithine = L-glutamate + N-acetyl-L-glutamate 5-semialdehyde</text>
            <dbReference type="Rhea" id="RHEA:18049"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29123"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57805"/>
            <dbReference type="EC" id="2.6.1.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
        <text evidence="2">Binds 1 pyridoxal phosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 4/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="2">May also have succinyldiaminopimelate aminotransferase activity, thus carrying out the corresponding step in lysine biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.11" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373360.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10390"/>
    <dbReference type="EnsemblBacteria" id="ADO58822">
        <property type="protein sequence ID" value="ADO58822"/>
        <property type="gene ID" value="PPSC2_22915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4852"/>
    <dbReference type="eggNOG" id="COG4992">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016922_10_1_9"/>
    <dbReference type="OMA" id="PFMVPTY"/>
    <dbReference type="OrthoDB" id="572533at2"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00109"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003992">
        <property type="term" value="F:N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01107">
        <property type="entry name" value="ArgD_aminotrans_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004636">
        <property type="entry name" value="AcOrn/SuccOrn_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00707">
        <property type="entry name" value="argD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="127"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="245"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="160"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>N(2)-acetyl-L-ornithine</name>
            <dbReference type="ChEBI" id="CHEBI:57805"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="302"/>
        </location>
        <ligand>
            <name>N(2)-acetyl-L-ornithine</name>
            <dbReference type="ChEBI" id="CHEBI:57805"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="303"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="420" mass="45556" checksum="5BA49895DC6BB295" modified="2011-01-11" version="1">MSKEPNTLVSEEMPSTNGSGAQAEKGAAKVQADSSLFPNYARYPLTLVKGQGSWLWDDQGKRYLDFMSGIAVTNLGHAPQAVAERLKKQIDELWHVSNLFHIPGQERAAALLTANSSADAVFFCNSGAEANEAAIKLARRYHQKVKQTGRYEIITFTQSFHGRTLATLTATGQDKVKEGFLPLPAGFKSVPLHDQAALEAAINENTAAIMLEMVQAEGGMYPVDPAFVDVITKLCHEHGLLLIIDEVQTGMGRTGKLFAFEHYGIEPDIFTLAKGLGSGFSVGAMLGKEYLREAFTAGSHGSTFGGTPLAMAAVQATIETIIDDKLPERAAEMGDYLFHSLQKQLKDIPFVQDIRGKGLMVGIECAEPVAELVLAGQKKGILFITAGPNVIRLLPNLYVTKDEIDQAVTWIAELIREHVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ0</accession>
    <name>E3EBQ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yuxN</name>
        <name evidence="3" type="ORF">PPSC2_23120</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373406.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10605"/>
    <dbReference type="EnsemblBacteria" id="ADO58868">
        <property type="protein sequence ID" value="ADO58868"/>
        <property type="gene ID" value="PPSC2_23120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4897"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063824_1_1_9"/>
    <dbReference type="OMA" id="IADSDKW"/>
    <dbReference type="OrthoDB" id="2047542at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="2"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="25"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="34763" checksum="5A2FB08390A7040E" modified="2011-01-11" version="1">MESKKNDILQAAIRLFSRKGYYSTSVEEIAKESGMAKASFYKYFQGKEELPLEMCIILENNIEQDIRALYSKPDLSKHDKLHGFIVLYLKNLVENKVYLMMDLPEPSMLIFQNEQLNGVFEQHEYKLYKWVRDCLIDIFGPGIEDHAWDITFVLKSIVFEYIRFFADRMNDETIEHLTQFIIFLSSSLATSLSSADPAPHLFWSKKGWLPESALSNPFDQGRQINGLLHSLEDSILLSSWSSEEKQECQQIYAQLKEEALKSNPQKGLLKALFAYLEQYKEVQKVCHLLRNLLGLAPISE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBR1</accession>
    <name>E3EBR1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polysaccharide pyruvyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">csaB</name>
        <name evidence="2" type="ORF">PPSC2_23175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373417.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10660"/>
    <dbReference type="EnsemblBacteria" id="ADO58879">
        <property type="protein sequence ID" value="ADO58879"/>
        <property type="gene ID" value="PPSC2_23175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4908"/>
    <dbReference type="eggNOG" id="COG2327">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039510_0_1_9"/>
    <dbReference type="OMA" id="TVAWAQG"/>
    <dbReference type="OrthoDB" id="635734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007345">
        <property type="entry name" value="Polysacch_pyruvyl_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019896">
        <property type="entry name" value="Polysacch_pyruvyl_Trfase_CsaB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04230">
        <property type="entry name" value="PS_pyruv_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03609">
        <property type="entry name" value="S_layer_CsaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PS_pyruv_trans" evidence="1">
        <location>
            <begin position="18"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="378" mass="41673" checksum="201684121410B2C3" modified="2011-01-11" version="1">MVTTAKTIIISGYYGFHNSGDEAVLKSILTALEEESRQAGITIKPVVLSSDPAWTQKMYGVEAVPRMSLGEVRRAIKNSDGLISGGGSLLQDATSPKSIPYYLAILKLAQWAGKPTFVYAQGMGPVQRKIFYPMIRSVFQRCEYVSVRDEQSAALLSTMKLKRPVVEVVPDPVMGLPLPSGSELHDAATETDKDKLPVVGVSVRYWDKEQRDLTAIADGLKRLATERRVHLRFLPFHLPDDVQASRMVMDLLGDIRGAGSLVSMCDQVTDPQQMLLEVSRCSLMIGMRLHSLIYAASHQVPPLGISYDPKIDHFLSRVGSQPVGTTDALDGQRLANESMRLLDQRSQWIESQGAAIALLKSEARLPAQHIVNYLCRKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBS6</accession>
    <name>E3EBS6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">ATP synthase epsilon chain</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">ATP synthase F1 sector epsilon subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9 11">F-ATPase epsilon subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 16" type="primary">atpC</name>
        <name evidence="16" type="ORF">PPSC2_23240</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Produces ATP from ADP in the presence of a proton gradient across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11 12">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cell membrane</location>
            <topology evidence="2 11">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11 12">Belongs to the ATPase epsilon chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373431.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10730"/>
    <dbReference type="EnsemblBacteria" id="ADO58894">
        <property type="protein sequence ID" value="ADO58894"/>
        <property type="gene ID" value="PPSC2_23240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4921"/>
    <dbReference type="eggNOG" id="COG0355">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084338_1_3_9"/>
    <dbReference type="OMA" id="MGGFAEI"/>
    <dbReference type="OrthoDB" id="1696893at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd12152">
        <property type="entry name" value="F1-ATPase_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00530">
        <property type="entry name" value="ATP_synth_epsil_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036794">
        <property type="entry name" value="ATP_F1_dsu/esu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001469">
        <property type="entry name" value="ATP_synth_F1_dsu/esu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020547">
        <property type="entry name" value="ATP_synth_F1_dsu/esu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020546">
        <property type="entry name" value="ATP_synth_F1_dsu/esu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036771">
        <property type="entry name" value="ATPsynth_dsu/esu_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13822">
        <property type="entry name" value="PTHR13822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00401">
        <property type="entry name" value="ATP-synt_DE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02823">
        <property type="entry name" value="ATP-synt_DE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46604">
        <property type="entry name" value="SSF46604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51344">
        <property type="entry name" value="SSF51344"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01216">
        <property type="entry name" value="ATP_synt_epsi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 12" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 11 12" id="KW-0139">CF(1)</keyword>
    <keyword evidence="13" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="11" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="6 11 12" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11 12" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP-synt_DE_N" evidence="15">
        <location>
            <begin position="6"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_DE" evidence="14">
        <location>
            <begin position="86"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="13">
        <location>
            <begin position="90"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00530"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO58894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15226" checksum="71E556E403634B13" modified="2011-01-11" version="1">MSTYLLEIVTPERLVYAEQVNSISVRGSEGDLGILPGHLPLVTPLKIAPVRIKIGGQTEVIAVNGGFIEVRKDKVVILAESAERSEDIDVERARAARERAELRLQSKQEQIDHHRAEVALQRALNRLNATSIRTNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC03</accession>
    <name>E3EC03_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplC13</name>
        <name evidence="7" type="ORF">PPSC2_24325</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373661.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11840"/>
    <dbReference type="EnsemblBacteria" id="ADO59127">
        <property type="protein sequence ID" value="ADO59127"/>
        <property type="gene ID" value="PPSC2_24325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5151"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="ISRPEYV"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="117"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="148"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="190"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="82"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="34295" checksum="CFB82655C5D955E7" modified="2011-01-11" version="1">MGKGKAVHGRFRAPSDRIFDACNVVFMLCLMVFTLYPFLNTLAVSLNEANDSIRGGIYLWPREFTWSNYEFVFKEATIFHATLISVLRTVAGTVTSVFCCAMVAYTISRPEYVLRKFVSIAFILTMYFSGGLIPNFLLIRELGMLGTFWVYIVPGLIGVFNVIVIRSFIEGLPEGILESARIDGAGEFATFMRIVLPLCVPVLATVSLFTAVSQWNSWFDVFLYNSSYEQWSTLQYELMKILQNSNTSVNAQDYASQFSGSENLAKAVTPTSIRATMTIVASVPIILVYPFLQKYFVKGMTLGGVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC04</accession>
    <name>E3EC04_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Protein lplB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplB17</name>
        <name evidence="7" type="ORF">PPSC2_24330</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373662.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11845"/>
    <dbReference type="EnsemblBacteria" id="ADO59128">
        <property type="protein sequence ID" value="ADO59128"/>
        <property type="gene ID" value="PPSC2_24330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5152"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="OMA" id="RIWYITL"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="36"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="100"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="232"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="292"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="96"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="37202" checksum="6A8D058537A258C5" modified="2011-01-11" version="1">MSYTSPPPVTTSSGRLPSSRRTGFRGFIHKLNQQRALVWMSVPFLIWLFIFKYLPLWGWTIAFQDFKPARKLLDQHWVGLKHFRFLFQDEHFLRVMRNTLAMSFINLVLGFVTAIALAILLNELRQLVFKRVVQTISYLPHFISWVVAASIISTALSADGGIINEVLMWLGLIKEPILWLGEGSYFWGILGASEVWKNVGWNTIIYLAAMTMIDPSQYEAAEMDGAGRFQRIWHVTLPGLKPVFIILLIMNIGNLLESGFEPQYLLGNGMNVDYSENLDIFVLKYGIQMGNFSLSIAAGMFKTVVSFILLFSANYIAKRLGEERLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC34</accession>
    <name>E3EC34_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">Single-stranded DNA-binding protein</fullName>
            <shortName evidence="2">SSB</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ssb</name>
        <name evidence="6" type="ORF">PPSC2_25430</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_010346813.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12925"/>
    <dbReference type="EnsemblBacteria" id="ADO59374">
        <property type="protein sequence ID" value="ADO59374"/>
        <property type="gene ID" value="PPSC2_25430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5389"/>
    <dbReference type="eggNOG" id="COG0629">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078758_6_2_9"/>
    <dbReference type="OMA" id="INIVIWR"/>
    <dbReference type="OrthoDB" id="1942216at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04496">
        <property type="entry name" value="SSB_OBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00984">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000424">
        <property type="entry name" value="Primosome_PriB/ssb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011344">
        <property type="entry name" value="ssDNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10302">
        <property type="entry name" value="PTHR10302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00436">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00621">
        <property type="entry name" value="ssb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50935">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2" id="KW-0234">DNA repair</keyword>
    <keyword evidence="2" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1 2 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="104"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Important for interaction with partner proteins" evidence="2">
        <location>
            <begin position="158"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="17929" checksum="ADC37D45325CD7F3" modified="2011-01-11" version="1">MLNRVILIGRLTKDPELRYTPSGVAVTQFTLAVDRPFTSQGGEREADFLPIVTWRQLAETCANYLRKGRLTAVEGRVQVRNYENNEGKRVYVTEIVADNVRFLESNRDSGNGGGNSGGGMREESPFGGGNSNSGRGNNNSRNNQDPFSDDGKPIDISDDDLPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC69</accession>
    <name>E3EC69_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA primase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">M1-364</name>
        <name evidence="5" type="ORF">PPSC2_01140</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54212.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599374.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0225"/>
    <dbReference type="EnsemblBacteria" id="ADO54212">
        <property type="protein sequence ID" value="ADO54212"/>
        <property type="gene ID" value="PPSC2_01140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.216"/>
    <dbReference type="eggNOG" id="COG3378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_578349_0_0_9"/>
    <dbReference type="OrthoDB" id="832277at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004968">
        <property type="entry name" value="DNA_primase/NTPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006500">
        <property type="entry name" value="DNA_primase_phage/plasmid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045455">
        <property type="entry name" value="DUF5906"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014015">
        <property type="entry name" value="Helicase_SF3_DNA-vir"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014818">
        <property type="entry name" value="Phage/plasmid_primase_P4_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08706">
        <property type="entry name" value="D5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19263">
        <property type="entry name" value="DUF5906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03288">
        <property type="entry name" value="Pox_D5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01613">
        <property type="entry name" value="primase_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51206">
        <property type="entry name" value="SF3_HELICASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF3 helicase" evidence="4">
        <location>
            <begin position="274"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54212.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="565" mass="65756" checksum="BECE2D7EADBFFBB2" modified="2015-05-27" version="2">MPNDKRIRINLMDSNASVELSEEQTDTNYEFFGEYSDSVTCEDIETLQYSEDIDILTLCTEKLSYEDEIEQFDEHDDHSTLREETIFYEVEEISKAVEAENVENFKVKDNNTRFYKTSSDRGNFVPRVEWLMLNSFEMISSADGISIYQTKQGYYKHHSDSELAVLIRKNLTEDQNREVSRRKMDEVAYRLKTHPDLWRKFNDLNTDTNLINFRDGVLNLRERRMLPHDPKYCFTSFIDADCKVIPQQNTNNRDYSYSSVFECFLTDCTEGDKAKQASLQQMVGYIISNHFNAKKMFVLIGEPHTGKSVWLSLLQILIGKEHTTSMTLKQLGVNRFMQTRLAHSKLNISPEMSDDGDLKGVEFIKAVTGGDLITGDRKGEAAIDFYGRTKLVAAGNHMPKLAKHDGTTAFIDRLLFITFNNSIPERQRDRFLLQKLLEERDIIIKWALEGLYQLIDNNFIFTECNEAIQFKKKYMAELDNVTEFVNDMCVVEPENDKSRVHRTRLYDAYIIYCKANGLTSVKKTEFWREIEKFRVRSGKIRVEGSTPLMGYRGIRLLSPDEYTHT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECF2</accession>
    <name>E3ECF2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exodeoxyribonuclease III</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-449</name>
        <name evidence="2" type="ORF">PPSC2_01535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368937.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14230"/>
    <dbReference type="EnsemblBacteria" id="ADO54295">
        <property type="protein sequence ID" value="ADO54295"/>
        <property type="gene ID" value="PPSC2_01535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.305"/>
    <dbReference type="eggNOG" id="COG3568">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086635_0_0_9"/>
    <dbReference type="OMA" id="HWTWAYN"/>
    <dbReference type="OrthoDB" id="1387978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="1">
        <location>
            <begin position="18"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="30536" checksum="DC36913455C18789" modified="2011-01-11" version="1">MKLLTLNAHAWMEENQHDKLKQLAAFIDEQQFDVIALQEVNQSLEETPLTPDDLGAYYSADPEVVIKRDNYAYVLNGLLSDAYHWTWAPAHIGFAKYDEGLAILSKTPITATVNEYISSMQDYDNYRSRKIVGIQTVVDGVQAWFVSGHYNWWNDEESFRGLWDRTTEVLDPLAPAPVFVMGDFNNAAEVRGEGYDYVMQSGWSDTYSNAAVRDAGHTVIKAIAGWESNAEPLRIDYIFSSKAAQVQSSAVVLNGKTGPVVSDHFGVAVELEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECM2</accession>
    <name>E3ECM2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Inositol-1-monophosphatase</fullName>
            <ecNumber evidence="6">3.1.3.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">suhB</name>
        <name evidence="7" type="ORF">PPSC2_04020</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>a myo-inositol phosphate + H2O = myo-inositol + phosphate</text>
            <dbReference type="Rhea" id="RHEA:24056"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17268"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:84139"/>
            <dbReference type="EC" id="3.1.3.25"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the inositol monophosphatase superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.25" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54794.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_017428433.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16820"/>
    <dbReference type="EnsemblBacteria" id="ADO54794">
        <property type="protein sequence ID" value="ADO54794"/>
        <property type="gene ID" value="PPSC2_04020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.801"/>
    <dbReference type="eggNOG" id="COG0483">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044118_0_4_9"/>
    <dbReference type="OrthoDB" id="1741160at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008934">
        <property type="term" value="F:inositol monophosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052832">
        <property type="term" value="F:inositol monophosphate 3-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052833">
        <property type="term" value="F:inositol monophosphate 4-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046854">
        <property type="term" value="P:phosphatidylinositol phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01639">
        <property type="entry name" value="IMPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033942">
        <property type="entry name" value="IMPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020583">
        <property type="entry name" value="Inositol_monoP_metal-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020550">
        <property type="entry name" value="Inositol_monophosphatase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022337">
        <property type="entry name" value="Inositol_monophosphatase_SuhB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01959">
        <property type="entry name" value="SBIMPHPHTASE"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00629">
        <property type="entry name" value="IMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00630">
        <property type="entry name" value="IMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54794.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="31113" checksum="A994376A8BF290ED" modified="2015-05-27" version="2">MNEHENEKVPYIVSGKSYTAVAINAASKAGEWIKSRLGTVEQLNTKQSSTDLVTEVDKGAEQMIRRLILTHFPDHAILGEEGVEPGAEASARALEAAREEEYLWIIDPVDGTTNFVHSLPYYSVSIALAHRGEVIVGVIYDPSRDEMFVAEKGKGAYVHGNRMQASKEETLGDSLVCIGFPPDRTYAQPLNMKITQVLTPQVRGIRALGSAALHLAYVASGRLSAYCEIGLNAWDVAAGALLVQESGGTITNTLGQPYDLSVRHVVATNTAIHSQLIQVLKEADATGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECM7</accession>
    <name>E3ECM7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_04045</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369434.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16845"/>
    <dbReference type="EnsemblBacteria" id="ADO54799">
        <property type="protein sequence ID" value="ADO54799"/>
        <property type="gene ID" value="PPSC2_04045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.806"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_2_9"/>
    <dbReference type="OMA" id="YKIVYFF"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="211"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="270"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="73"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="302" mass="33985" checksum="ADEDE273B56C703D" modified="2011-01-11" version="1">MSLRNHQSLKANMTGYAFISPFIVGFLAFTLIPMFISLYLSFTSYNLFTPPKWIGLGNFEKMFTGDPKYWNSIRVTFTYVLVGVPLRLIFALFVAMILNTKSRMVGTYRTMYYLPSIIGGSVAVSIMWRNIFSNEGIVNSLLSALGATPVKWFGDPNASLMMLITLSVWQFGSSMLIFLAGLKNIPHEMYEASSVDGATPVRKFFSITLPLLSPIILFNLIMQTISAFMTFVPAYVISKGEGGPMDGTMLHSLYLFRQAFMFSNMGYAAAMAWVMLIMIAILTAILFMTSKFWVFYETEKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECW8</accession>
    <name>E3ECW8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Phosphoribosylaminoimidazole-succinocarboxamide synthase</fullName>
            <ecNumber evidence="8">6.3.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">SAICAR synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">purC</name>
        <name evidence="10" type="ORF">PPSC2_04225</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + ATP + L-aspartate = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:22628"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58443"/>
            <dbReference type="ChEBI" id="CHEBI:77657"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the SAICAR synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.6" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369472.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17040"/>
    <dbReference type="EnsemblBacteria" id="ADO54837">
        <property type="protein sequence ID" value="ADO54837"/>
        <property type="gene ID" value="PPSC2_04225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.841"/>
    <dbReference type="eggNOG" id="COG0152">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045637_0_2_9"/>
    <dbReference type="OMA" id="EFCYKND"/>
    <dbReference type="OrthoDB" id="1345271at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004639">
        <property type="term" value="F:phosphoribosylaminoimidazolesuccinocarboxamide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00137">
        <property type="entry name" value="SAICAR_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028923">
        <property type="entry name" value="SAICAR_synt/ADE2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001636">
        <property type="entry name" value="SAICAR_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018236">
        <property type="entry name" value="SAICAR_synthetase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01259">
        <property type="entry name" value="SAICAR_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00081">
        <property type="entry name" value="purC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01058">
        <property type="entry name" value="SAICAR_SYNTHETASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAICAR_synt" evidence="9">
        <location>
            <begin position="15"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="33464" checksum="15A0C9CDBDDE46A9" modified="2011-01-11" version="1">MSLSTAEGLIHAPLLYKGKVRELYDLGEHFLIVVTDRISAFDYVLEPPVPEKGNVLNKLSAFWFEQTKDLLENHVVHTDVDKLGHVIDEQHKELLKDRIMVTLKAERIDIECVVRGYITGGGWRQYEQTGEVNGIPLPKGLRKNERFPKPLFTPAAKNDVGHDEDISLHQMKELVGAQLTGELEEKSLALYEFARAFCEKRGIILADCKFEFGLVDGKVILIDEIFTPDSSRFWAQEKYELDMEIDSMDKEPVRSYLASSGWDKNSKPDPLPAEVVEETTARYTDIWRRLTAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED47</accession>
    <name>E3ED47_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppF1</name>
        <name evidence="7" type="ORF">PPSC2_02180</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369044.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14945"/>
    <dbReference type="EnsemblBacteria" id="ADO54404">
        <property type="protein sequence ID" value="ADO54404"/>
        <property type="gene ID" value="PPSC2_02180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.413"/>
    <dbReference type="eggNOG" id="COG4608">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_23_9"/>
    <dbReference type="OMA" id="GRYPHMF"/>
    <dbReference type="OrthoDB" id="1303270at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="4"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="47"/>
            <end position="54"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="308" mass="34680" checksum="824F39DB83DEF43D" modified="2011-01-11" version="1">MALLEINDLKVHYPVRGGFFQRVVDQVKAVDGVSISIEAGQTYGLVGESGCGKTTTGRTIIGLNKLTSGQILFNGKDLTALSRNNRHPLRRDIQMIFQDPYSSLNPRKRVLDVIAEPLRNFERLSNEEERRKVQMLLEKVGLNADAAYKYPHEFSGGQRQRIGIARALTLNPKLIIADEPVSALDVSVQAQVLNFMKDVQREFKLTYLFISHDLGIIRHMCDQIGIMYRGRLVEQGSEQDIYECPQHLYTQRLIATIPSIDPAKRLENAQKRQKLLSSYKSELPKHLDASGKPFALKSVSSSHQVALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDA7</accession>
    <name>E3EDA7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rcaC</name>
        <name evidence="8" type="ORF">PPSC2_02460</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369104.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15195"/>
    <dbReference type="EnsemblBacteria" id="ADO54464">
        <property type="protein sequence ID" value="ADO54464"/>
        <property type="gene ID" value="PPSC2_02460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.474"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_1_9"/>
    <dbReference type="OMA" id="LMVHIRY"/>
    <dbReference type="OrthoDB" id="1020672at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
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        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
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        <property type="entry name" value="PTHR48111"/>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Trans_reg_C"/>
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    </dbReference>
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        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="4"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="123"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="123"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="25714" checksum="4CF4265639D4CAEE" modified="2011-01-11" version="1">MKTNVLYIEDDQDIGAWTHQYLEERKYAVTWLRSGDGAVEAARTCQLVILDVMLPGLDGFTIGKRLKKEYPELPILMLSARTSIDDKLQGLDFADDYVTKPFHPDELIARMEILLRRSGSVSEESLQLGHLSVFPPDNRIVNRDTGEEITLTGKQYHIFAYLLRHLGQIMTKEQMYEAVWGDPYIDGDKTLMVHIRHLREKLEIDPATPRIIETIRGVGYRVKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE3</accession>
    <name>E3EDE3_PAEPS</name>
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        <submittedName>
            <fullName evidence="8">Transcriptional regulatory protein DesR</fullName>
        </submittedName>
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        <name evidence="8" type="primary">desR</name>
        <name evidence="8" type="ORF">PPSC2_04605</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="STRING" id="1406.LK13_17500"/>
    <dbReference type="EnsemblBacteria" id="ADO54922">
        <property type="protein sequence ID" value="ADO54922"/>
        <property type="gene ID" value="PPSC2_04605"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.925"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_90_10_9"/>
    <dbReference type="OMA" id="LDRFAPM"/>
    <dbReference type="OrthoDB" id="930905at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="P:phosphorelay signal transduction system"/>
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        <property type="term" value="P:regulation of transcription, DNA-templated"/>
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    </dbReference>
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        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
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        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH_LUXR_2"/>
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    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
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    <keyword evidence="4" id="KW-0804">Transcription</keyword>
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            <begin position="3"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="6">
        <location>
            <begin position="131"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
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            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="199" mass="22053" checksum="7C4D22A9647C33F2" modified="2011-01-11" version="1">MIRIVIAEDQRMLLGALASLLDLEEDMKVVGKASNGEEAIELVKQHQPDICIMDIEMPIKSGLDAAEELRGLNCKVLILTTFARPGYFERAIKAGTHGYLLKDSPSEELASSIRSIMAGRRIYAPELVDDAYAEVNPLTEREKTVLALIADGKNTKEIAGELFLTTGTVRNYISVILDKLGVSNRIEAITRFNEKGWFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE5</accession>
    <name>E3EDE5_PAEPS</name>
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        <submittedName>
            <fullName evidence="6">Deoxycytidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dck</name>
        <name evidence="6" type="ORF">PPSC2_04615</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DCK/DGK family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369557.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17510"/>
    <dbReference type="EnsemblBacteria" id="ADO54924">
        <property type="protein sequence ID" value="ADO54924"/>
        <property type="gene ID" value="PPSC2_04615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.927"/>
    <dbReference type="eggNOG" id="COG1428">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030466_2_1_9"/>
    <dbReference type="OMA" id="EAMVMTP"/>
    <dbReference type="OrthoDB" id="1275854at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019136">
        <property type="term" value="F:deoxynucleoside kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01673">
        <property type="entry name" value="dNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002624">
        <property type="entry name" value="DCK/DGK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031314">
        <property type="entry name" value="DNK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01712">
        <property type="entry name" value="dNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000705">
        <property type="entry name" value="DNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="dNK" evidence="5">
        <location>
            <begin position="12"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="16"/>
            <end position="24"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="147"/>
            <end position="151"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000705-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000705-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000705-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="24573" checksum="CAD0055FAACC1E71" modified="2011-01-11" version="1">MNNYNIPANALITVAGTVGVGKSTLTGALASRLGFKTSLEQVDHNPYLEKFYHDFERWSFHLQIYFLAERFKEQKNIFLSGGGFVQDRSIYEDTGIFAKMHADQGTMNPTDYQTYTSLFEAMVMTPFFPHPDVLIYLEGSLTSILSRIEERGREMEIQTERSYWEQMHRRYSDWINDFDACPVLRLNIDEYDVHDPASMDAILAEVGKVISKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDF8</accession>
    <name>E3EDF8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Arabinose transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">araJ</name>
        <name evidence="9" type="ORF">PPSC2_04680</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369570.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17575"/>
    <dbReference type="EnsemblBacteria" id="ADO54937">
        <property type="protein sequence ID" value="ADO54937"/>
        <property type="gene ID" value="PPSC2_04680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.940"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_61_2_9"/>
    <dbReference type="OMA" id="EFAPMGL"/>
    <dbReference type="OrthoDB" id="1384345at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="57"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="248"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="274"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="300"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="341"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="365"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="15"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="402" mass="42568" checksum="469EF13C65E46BA7" modified="2011-01-11" version="1">MSTQENMTANRFPPSLLWLTLGAFAIGMTEFVIMGLLPNVAHDLHVTIPQAGQLITSYALGVAIGAPVLTVLTHKVPQKKLLCLLMSIFILGNLFSVIAPNYELLIAARMATALSHGTFLGAGSLIAARLVRADKRAGAISMVLTGLTVANIIGVPFGTFIGQQLGWRASFGAIVVIGLISLFGIIRYIPVIQQDKPSSLKQEVKSLFNPKVLLMLLTGAVGCGSLFTVFTYITPMLTDISGFAEHSITWILVLFGLGVTIGNIVGGKLADWKLLPSLIANYAVLAIILAILTFTLQSQVLAVITVFIWGIAAFGIMPGIQVRIMNLAYEAPLLASTSSHSALNLGNAGGAFIGGVVINQMGLSAIPWVASLITVGGLLLMLVSYMMDRKTAHTEAIAEIQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDJ3</accession>
    <name>E3EDJ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hmpP</name>
        <name evidence="1" type="ORF">PPSC2_04845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369605.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17740"/>
    <dbReference type="EnsemblBacteria" id="ADO54972">
        <property type="protein sequence ID" value="ADO54972"/>
        <property type="gene ID" value="PPSC2_04845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.975"/>
    <dbReference type="eggNOG" id="COG0561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044146_7_0_9"/>
    <dbReference type="OMA" id="WHPDFTD"/>
    <dbReference type="OrthoDB" id="1861282at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000150">
        <property type="entry name" value="Cof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00099">
        <property type="entry name" value="Cof-subfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="28969" checksum="A31E5AF478BECF6A" modified="2011-01-11" version="1">MSDKKIIFFDIDGTLLDDDKKMPLTAEKAVFALKEQGHEVAIATGRAPFMFKDIREQLEIDSYVSFNGQYVVLRGEVVATNPLNREALQAMTDLALTHNHALVYMDHLDMKANIPNDELVEKSVQTLKAKISVGYDPLYFHGRDIYQTLLMCTAEEEPYYEAVFKAFDFVRWHPSSVDVVPHAGSKAKGIREITSRLGIADENQYAFGDGLNDVEMLTTIHNSVAMGNGCDEAKAAAKMVTKRADEDGILYGLQKLGLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDL5</accession>
    <name>E3EDL5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Manganese ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">troC</name>
        <name evidence="8" type="ORF">PPSC2_06470</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the ABC-3 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369954.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19435"/>
    <dbReference type="EnsemblBacteria" id="ADO55323">
        <property type="protein sequence ID" value="ADO55323"/>
        <property type="gene ID" value="PPSC2_06470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1333"/>
    <dbReference type="eggNOG" id="COG1108">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028808_0_0_9"/>
    <dbReference type="OMA" id="LCIFWRA"/>
    <dbReference type="OrthoDB" id="1421296at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001626">
        <property type="entry name" value="ABC_TroCD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30477">
        <property type="entry name" value="PTHR30477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00950">
        <property type="entry name" value="ABC-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="67"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="136"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="188"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="227"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="32250" checksum="F761F8F176CDBB6B" modified="2011-01-11" version="1">MTSLAALLADPNMQWILLGCILLGLSSGVIGSFMYLRKQSLMGDALAHAALPGVCVAFMITGTKSMFGFMIGAAIAGIVATFAISALTRYSRIKSDSAIAAVLSVFFGFGIMLLTEIQHSGAGNQSGLDKFLFGQAAAMVLSDVYTMAVISVVLIGICLLFFKEFKLLSFDPGFARGLGFPAGLLDKLLMLLIVIAVVAGIQAVGVIMMAALLITPAVSARYWTEKLGVMVCLSGLFGAIAGLGGTVISSLGQNLPTGPLCVLCATVVFGVSLIFAPQRGMISKAIVRLNARKSLEQGVGTQPREERAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDM1</accession>
    <name>E3EDM1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pilus assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cpaF</name>
        <name evidence="3" type="ORF">PPSC2_06495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369960.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19460"/>
    <dbReference type="EnsemblBacteria" id="ADO55329">
        <property type="protein sequence ID" value="ADO55329"/>
        <property type="gene ID" value="PPSC2_06495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1338"/>
    <dbReference type="eggNOG" id="COG4962">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005379_4_1_9"/>
    <dbReference type="OMA" id="NGPDAIF"/>
    <dbReference type="OrthoDB" id="473670at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="69"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="415" mass="46118" checksum="96CF4CBBCD06B32F" modified="2011-01-11" version="1">MNEEQFKVLRADIRNGLDVTSSVKDTDLVRHIEKRILHDVELASLTSREKHALVRKIFNSFRGLDVLQPLIDDPTVTEIMINSHREIFVERAGEVIQVPDQFESRERLEDLIQTIVAGVNRIVNEASPIVDARLKDGSRVNIVLPPVALKGPTMTIRKFPERPMTMDDLIRMGALNIEAAAMLKDLVRSKYNIFISGGTGSGKTTFLNALSQFIPSSERIITIEDSAELQIVTVPNLVSMETRNGNTEGKGEITIRDLIRSSLRMRPNRIVVGEVRGSEALDMLQAMNTGHDGSLSTGHSNNIRDMVSRLETMVLGGAELPLGVVRQQISSAIDIFVHLSRLRDKSRRVLEISEVIGFENGEVTLNPLYRFQEHGESKGQIVGELERCGGGLQHTLKLQMAGIKPEIWHKGGVSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDM9</accession>
    <name>E3EDM9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Forkhead-associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_06535</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369968.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19500"/>
    <dbReference type="EnsemblBacteria" id="ADO55337">
        <property type="protein sequence ID" value="ADO55337"/>
        <property type="gene ID" value="PPSC2_06535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1346"/>
    <dbReference type="eggNOG" id="COG1716">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_442640_0_0_9"/>
    <dbReference type="OMA" id="RSHIELC"/>
    <dbReference type="OrthoDB" id="1632705at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00060">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045962">
        <property type="entry name" value="DUF6382"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19909">
        <property type="entry name" value="DUF6382"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00498">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00240">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SSF49879"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="277"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="301"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="domain" description="FHA" evidence="3">
        <location>
            <begin position="508"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="196"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="371"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="196"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="212"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="383"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="414"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="594" mass="66888" checksum="317D3580D51AFE3A" modified="2011-01-11" version="1">MFGLSRDFARNGGTFMILNKEGGLKTDDLNSVQTRMMTGNRIPGLLELRIKEVDFQIELHYDISGQRMLSQVWKGGNVSTSDFYLILFEVVDALHRSPQYMLNIRQFILHEDYIFISGSGTRKNVSLTYVPLCSVQYTQQTGSYFKQMVIRLMTRVAHLQGESIQRILDLCDRNEFELSALKELLLQGMATGEQSISGQAEGRSSVHSSHTIQDNDTDRGGRTHGQEHRETLQEIQELKRVNRLKQSAKSEENVEVGADNEMENEEVEPKSQKYKTYIALGCLLASAIVWRYIYLDHPETVPLLISIVLTLVLVAVTYISWTGKLERNRALSPFYSEAVPVLDSEWLGAASPAQRKNDRYQVDKLTGFVAGRHHHDKQSSDSSDQGQESWRWTFPDSESKSMESRTTEDGGKVSTNYDLHEHSRKGAMRGNELDDSDTSEAYYKSLSGVTELLNTISKQETVLLRPDQEIPSPTVQHSPIACLDRKLSGSGETERIRLQPDQFVGGSFIIGRDPQLVQFVEHTDGVSRSHIELCIVTGGQSHIIKDLSSTNGTVLNGEPMVPYKEYTMKDGDTFKIAGVSYIYRLDSFKSSNAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDN6</accession>
    <name>E3EDN6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Glucose-6-phosphate isomerase</fullName>
            <shortName evidence="7">GPI</shortName>
            <ecNumber evidence="7">5.3.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Phosphoglucose isomerase</fullName>
            <shortName evidence="7">PGI</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Phosphohexose isomerase</fullName>
            <shortName evidence="7">PHI</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">pgi</name>
        <name evidence="9" type="ORF">PPSC2_06570</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7 8">
            <text>alpha-D-glucose 6-phosphate = beta-D-fructose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11816"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:58225"/>
            <dbReference type="EC" id="5.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 7 8">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 2/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7 8">Belongs to the GPI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369975.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19535"/>
    <dbReference type="EnsemblBacteria" id="ADO55344">
        <property type="protein sequence ID" value="ADO55344"/>
        <property type="gene ID" value="PPSC2_06570"/>
    </dbReference>
    <dbReference type="GeneID" id="66573626"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1353"/>
    <dbReference type="eggNOG" id="COG0166">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037303_0_1_9"/>
    <dbReference type="OMA" id="CPAYAYG"/>
    <dbReference type="OrthoDB" id="417261at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00181"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004347">
        <property type="term" value="F:glucose-6-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd05015">
        <property type="entry name" value="SIS_PGI_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05016">
        <property type="entry name" value="SIS_PGI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00473">
        <property type="entry name" value="G6P_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001672">
        <property type="entry name" value="G6P_Isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018189">
        <property type="entry name" value="Phosphoglucose_isomerase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035476">
        <property type="entry name" value="SIS_PGI_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035482">
        <property type="entry name" value="SIS_PGI_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11469">
        <property type="entry name" value="PTHR11469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00342">
        <property type="entry name" value="PGI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00662">
        <property type="entry name" value="G6PISOMERASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00765">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00174">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51463">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7 8" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="4 7 8" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="5 7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="291"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="451" mass="50044" checksum="806B60A3018C2A08" modified="2011-01-11" version="1">MSKKVIFDYTKALSFVGQHEIDYFAEPIKLAHEQLHNQTGVGSDFLGWIDLPTNYDKEEFARIQKAAAKIQSDSEVLIVIGIGGSYLGARAAIEMLSHSFYNALPKDQRKGPAIYFAGNNISSTYVNHLLELIEGKDFSVNVISKSGTTTEPAIAFRVFRAALEKKYGKEEARKRIYATTDKERGALKKLANEEGYESFIIPDDVGGRYSVLTAVGLLPIATAGINIEEMMQGAADASKEYSNPNVAENEAYQYAAVRNALYRKGKAIEILVNYEPSLHFVSEWWKQLYGESEGKDYKGIYPASVDFSTDLHSMGQFIQEGSRNIFETVIQVENVPSHITIEADEDDLDGLNFLAGKTVDFVNKKAFQGTLLAHTDGQVPNLIVNIPDLSPYSFGYLAYFFEKACGISGYLLGVNPFDQPGVEAYKKNMFALLGKPGFEKEKAELEARLSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE25</accession>
    <name>E3EE25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gerKB</name>
        <name evidence="7" type="ORF">PPSC2_02735</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369145.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0521"/>
    <dbReference type="EnsemblBacteria" id="ADO54505">
        <property type="protein sequence ID" value="ADO54505"/>
        <property type="gene ID" value="PPSC2_02735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.514"/>
    <dbReference type="eggNOG" id="COG1457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_1_1_9"/>
    <dbReference type="OrthoDB" id="842200at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="69"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="185"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="219"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="269"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="336"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="365" mass="41433" checksum="E530DDD7F022E5B4" modified="2011-01-11" version="1">MRETVTRVSGLAIAFSLFQVGSTTLFLLGAKAKQDAWLAMLIGALAGFVLLIMYLYMHKLDPHRDLYELLCHYWGKWVGSLGGLLFISYFAYEASRNARDMGELGALTLLNRTPTEVITFIALIACADVAWFGPRVWFLLCHIFFLLLFFGYSTLLLLTPFTGLIHFEFLFPVLENGLTPVVKAAIPEIMSFPFGQTILFLVLFKLVTDKRKLKRSIVIVYWITAVFLILMNELTILVLGPEWAASSTYPLFEVTQLIQLPKIFERADVLFSMILFIGIGVKTTGFMFGAVIGLQTITPLRYKPALLLLSIIIYGLTFLSPRLTEFLWFGLNVALIQIWPIFQIALPVLLFLTMLIRKKKRRAYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB4</accession>
    <name>E3EEB4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yfiB3</name>
        <name evidence="10" type="ORF">PPSC2_05160</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55037.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1055"/>
    <dbReference type="EnsemblBacteria" id="ADO55037">
        <property type="protein sequence ID" value="ADO55037"/>
        <property type="gene ID" value="PPSC2_05160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1045"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="142"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="225"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="263"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="1"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="319"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="353"/>
            <end position="360"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55037.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="565" mass="62299" checksum="DFD27F41642AF9DD" modified="2015-05-27" version="2">MAALVMMLLELTVELSQPYLISKIIDEGIRQQNLPVVWLWGGVLVGSAIIAFMAGISSSFFASHASQGFGYDVREKLYQKVQSFSYPVFKRFATSSLITRLTGDVTQVQDTVFMSLRFMTRVPLVVIGSIVMALVVHFRLGLLLAVMAPVLFVFVLVTMRRTVTLFKGVQRRLDDVNGVIQENLTGIRLIRVFVRMRHEIERFAHYGSELMKGTVSALRWTETTMPFILFTMNAGIIAVLWFGRGQISTGDASVGQVVAVVNYSLRTIGALSALSGIVVVFSRATASTGRIREVLETPNVEGRGLEAVPTQNTRMEGQVEMDRVSFHYPGSDLAVLKDISFKARPGERIAIMGATGSGKSSLVQLITRLYEEDEGHVRFDGKDARELDGAILREAIGYVPQEVLLFTGSIRDNIAWGLEHASLEQIQEAARMAQIHHMIERLPQGYDTMLGQRGVNLSGGQKQRLSIARALVRQPAVLILDDSTSALDAGTETALLNALDGLSCTTFLITQKISSTASADQILLLDEGRLIASGSHKHLMDSSDLYRRIYESQYGKEESHVQGTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB5</accession>
    <name>E3EEB5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yfiC3</name>
        <name evidence="10" type="ORF">PPSC2_05165</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369671.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18090"/>
    <dbReference type="EnsemblBacteria" id="ADO55038">
        <property type="protein sequence ID" value="ADO55038"/>
        <property type="gene ID" value="PPSC2_05165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1046"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="MRWITRR"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="196"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="288"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="56"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="371"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="404"/>
            <end position="411"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="612" mass="68527" checksum="69373FB8BC21E231" modified="2011-01-11" version="1">MFKELIEPFRQSTPESGVLRNPAGAEGRSKAKAKNWSGTVGRIWAYLARRKAKLMLVLFMVLLSSGLSLLGPYLVGVAVDDFLEGPGGRTWIYFLIGLGAVYLLNSLTSWLQNIWMIEIAQETVYRMRFDLFSHLHRLPIPFYGKRQQGEIMSRLTNDIENVSSTLNSSAIPIFSSILTLIGTLTVMLWLSPLMTLLTFIVVPLMAAGMRWITRRTGPLYKERQKNLGELNGYIEETLSGQQIIKAFSQEKRVIRDFRERNDRIRLSGFWAQTISGFIPKLMNGLNNLSFAIVAGIGGILAIRGSITIGTIIVFVEYARQFTRPLNDLANQWNTLLSAIAGAERVFEILDEDEESKDERGAVKLKHVEGAVRFTDVSFGYDEGSATLETISFEAKPGEMIALVGPTGAGKTTLIQLLSRFYSPDKGTITLDGRDITTIERESLRSRMAFVLQDTFLFQGTIRENIRFGRLDATDEEVEQASKLANAHSFIMRMKDGYDKVLEANGSGISQGQKQLLAIARAILANPSILVLDEATSSIDTITEMKIQEGLERLMQGRTSFVIAHRLNTIRQADRILVLKDGRLDEQGSHEELLAHKGFYSDLYYGQLRKQSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEK5</accession>
    <name>E3EEK5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Thioredoxin peroxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ykuU</name>
        <name evidence="6" type="ORF">PPSC2_07095</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370083.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20075"/>
    <dbReference type="EnsemblBacteria" id="ADO55456">
        <property type="protein sequence ID" value="ADO55456"/>
        <property type="gene ID" value="PPSC2_07095"/>
    </dbReference>
    <dbReference type="GeneID" id="66573517"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1464"/>
    <dbReference type="eggNOG" id="COG0450">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042529_21_3_9"/>
    <dbReference type="OMA" id="WWPKDFT"/>
    <dbReference type="OrthoDB" id="892697at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000866">
        <property type="entry name" value="AhpC/TSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024706">
        <property type="entry name" value="Peroxiredoxin_AhpC-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00578">
        <property type="entry name" value="AhpC-TSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000239">
        <property type="entry name" value="AHPC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1 6" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="5">
        <location>
            <begin position="4"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine sulfenic acid (-SOH) intermediate" evidence="4">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000239-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="19752" checksum="F4D216AE9505D04A" modified="2011-01-11" version="1">MAERLVGRPAPDFALETVSGDGQEFGSVKLSDYRGKWLVFFFYPLDFTFVCPTEITALSDAADQFKELDTEILGISVDSVHSHKAWINTAKENNGLGKLNFPLASDITKKTASDYGVLIEEEGVALRGLFIIDPEGELKYQVVNHNDVGRSVEETLRVLQALQSGGLCPMNWKPGDKNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN6</accession>
    <name>E3EEN6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphate transport system permease protein PstA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pstA</name>
        <name evidence="8" type="ORF">PPSC2_08270</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309592.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20875"/>
    <dbReference type="EnsemblBacteria" id="ADO55723">
        <property type="protein sequence ID" value="ADO55723"/>
        <property type="gene ID" value="PPSC2_08270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1738"/>
    <dbReference type="eggNOG" id="COG0581">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033621_2_2_9"/>
    <dbReference type="OMA" id="GIARWKA"/>
    <dbReference type="OrthoDB" id="1763210at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035435">
        <property type="term" value="P:phosphate ion transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005672">
        <property type="entry name" value="Phosphate_PstA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00974">
        <property type="entry name" value="3a0107s02c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="66"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="129"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="181"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="261"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="62"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="298" mass="32012" checksum="63F074EA80762845" modified="2011-01-11" version="1">MKAKTTDKIATFVICFFALFIVALLVGLLGFILARGVSHISFDFLTSAPQTLRAGGGIGPQLFNSVFLLILTLIITIPIGWGAGIYMAQYAKPGKITDFIRLVVEVLSSFPSIVIGLFGLLLIVNTFDFGFSLLSGALALAVFNLPLMVRTTEQAFRAVPKEQKEAGLALGLSKWKIITSILLPAALPSLITGTILAAGRIFGEAAALLFTAGMSTPPLDFTDWNPLHARSPINPMRPAETLAVHIWKVNSEGIAPDSKDIAAGASAVLVLLVLVFNLSARWFGRVVYRRLTAAKRMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEX0</accession>
    <name>E3EEX0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">natSF</name>
        <name evidence="2" type="ORF">PPSC2_00535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368738.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13540"/>
    <dbReference type="EnsemblBacteria" id="ADO54093">
        <property type="protein sequence ID" value="ADO54093"/>
        <property type="gene ID" value="PPSC2_00535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.104"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114564_0_0_9"/>
    <dbReference type="OMA" id="WHYEGEY"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="19548" checksum="E6C79FAF71FDD4FE" modified="2011-01-11" version="1">MPASISNYRIVPMDEHQAAEICEWRYDPPYNIYGWLPWEQMKALEVEFGSPTLRQEQYVAVLNEENELTGFAQYFPMVGVTRLGLGMHPERCGHGTGSDFVRAIAEEAGRRHPQNEIDLEVLTWNQRAIRAYKAAGFELTDTYERQTPDGRKPFYCMVYRPEQQNRVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEZ6</accession>
    <name>E3EEZ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rbcR1</name>
        <name evidence="3" type="ORF">PPSC2_00650</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368764.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13640"/>
    <dbReference type="EnsemblBacteria" id="ADO54119">
        <property type="protein sequence ID" value="ADO54119"/>
        <property type="gene ID" value="PPSC2_00650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.128"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="FMDNPLV"/>
    <dbReference type="OrthoDB" id="750230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="32859" checksum="C1CDDCB31E3696AB" modified="2011-01-11" version="1">MNLSLLKLHIVELLNKHHKITTVAELLGLKQPTVTFHMKNLEREFGVKLFDTRMGKIILTDAGNALLHYATKINALAAEAERVVREFDTLQRGSIRIGASYVPATYLLPAVLHRFAREHPGIHISLSVKTAPVIKDMLARHEIDLGIISAEPFQSPTLLSESLGEDELVLICSPTHPLASETDLTSERIASSSFVLHGKDSSTRHATDKWLERGRRRLPSYLELDSLEAIKQAVMLGEHISFVSRIAVQSEVERGLLVVRPIPGQPVERHIYMVSNRDRHRSALIHRFTEYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF74</accession>
    <name>E3EF74_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkylhydroperoxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydfG</name>
        <name evidence="2" type="ORF">PPSC2_03135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54594.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599438.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15945"/>
    <dbReference type="EnsemblBacteria" id="ADO54594">
        <property type="protein sequence ID" value="ADO54594"/>
        <property type="gene ID" value="PPSC2_03135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.600"/>
    <dbReference type="eggNOG" id="COG2128">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082760_6_0_9"/>
    <dbReference type="OrthoDB" id="1893149at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004675">
        <property type="entry name" value="AhpD_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00778">
        <property type="entry name" value="ahpD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="12"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54594.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="16974" checksum="4E67892FF29706A9" modified="2015-05-27" version="2">MSLRFNHRAVSPSTFKAMMEMEKYISGRFTDKVLYELLKIRVSQINGCSYCLDMHAKDLLKLGDYADHILQLALWREVPLFSEKERAMLELAEAVTHISEQGVPTDLYNRVREHFTEEEYVDLITAINVINSWNRIAIATGMYPGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFC3</accession>
    <name>E3EFC3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369719.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55086">
        <property type="protein sequence ID" value="ADO55086"/>
        <property type="gene ID" value="PPSC2_05370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1089"/>
    <dbReference type="eggNOG" id="ENOG5030RP9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2956314_0_0_9"/>
    <dbReference type="OMA" id="YKDPMSQ"/>
    <dbReference type="OrthoDB" id="2033359at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6811" checksum="CD5199CFB1AC1164" modified="2011-01-11" version="1">MYKDPMSQADMEYKRYKTLNPVEEDDRRTADKTHTDDGIAEDNPRGVASAKPEPRDQAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFE1</accession>
    <name>E3EFE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yonR</name>
        <name evidence="2" type="ORF">PPSC2_05460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369737.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18370"/>
    <dbReference type="EnsemblBacteria" id="ADO55104">
        <property type="protein sequence ID" value="ADO55104"/>
        <property type="gene ID" value="PPSC2_05460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1108"/>
    <dbReference type="eggNOG" id="COG1813">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_17_5_9"/>
    <dbReference type="OMA" id="LNVGVYQ"/>
    <dbReference type="OrthoDB" id="2063007at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="13138" checksum="70C93395B3B43403" modified="2011-01-11" version="1">MSELLELVGTRIRDIRKSKGLSQEALAEQAGFNSSYIGFIERAERNISLKNLEKIAKALNVGVYQLLTYVKENDELTEEDSSIKAILSLLRTRESKDTELALKILTDIFMRMDER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFL6</accession>
    <name>E3EFL6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glutamine synthetase</fullName>
            <ecNumber evidence="4">6.3.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnA1</name>
        <name evidence="6" type="ORF">PPSC2_07325</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>ATP + L-glutamate + NH4(+) = ADP + H(+) + L-glutamine + phosphate</text>
            <dbReference type="Rhea" id="RHEA:16169"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.1.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the glutamine synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.2" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370134.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20305"/>
    <dbReference type="EnsemblBacteria" id="ADO55507">
        <property type="protein sequence ID" value="ADO55507"/>
        <property type="gene ID" value="PPSC2_07325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1513"/>
    <dbReference type="eggNOG" id="COG0174">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017290_1_2_9"/>
    <dbReference type="OMA" id="VFPWESK"/>
    <dbReference type="OrthoDB" id="416474at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008147">
        <property type="entry name" value="Gln_synt_b-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027303">
        <property type="entry name" value="Gln_synth_gly_rich_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004809">
        <property type="entry name" value="Gln_synth_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027302">
        <property type="entry name" value="Gln_synth_N_conserv_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03951">
        <property type="entry name" value="Gln-synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00653">
        <property type="entry name" value="GlnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00180">
        <property type="entry name" value="GLNA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00181">
        <property type="entry name" value="GLNA_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="5">
        <location>
            <begin position="101"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-AMP-tyrosine" evidence="2">
        <location>
            <position position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR604809-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="474" mass="52611" checksum="785520F69D4F0A10" modified="2011-01-11" version="1">MSVENVLKTIQENNIEWVDFRFVDLSGRAHHISLPASEVDEETFVNGVAFDGSSIPGYRGIEESDMVMLPDPEAVFIDPFTQHPTLNILCDIATPDGEKYDRDPRGIAKKAEEFLQSAGVGTAAFFAPESEFFIFDDVRYESGMNSSSFFVDSEEAAWNTNRKEEGGNLGFKVGVKGGYVPVAPVDTQQDIRSEMCRLLEEAGLRIERHHHEVATAGQAEINFRFDTLKKTADNLLVYKYIVHNTARQYGKVATFMPKPIFGDNGSGMHVHQSIFDGDTPLFYEKGGYANLSEMALHYIGGILYHAPALIALTNPSTNSFKRLVPGYEAPVNLVFSKGNRSAAVRIPVAAVTPKGCRIEFRTPDSTANPYLAFSAMLMAGLDGIKRKLNPIELGYGPLDTNIYELSDAEKGKIRSVPGTLDEALDALEADYEFLTEGGVFTKDFIDNYVEFKRSEAKSVNIRVHPHEYSLYFDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFZ9</accession>
    <name>E3EFZ9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">30S ribosomal protein S16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">rpsP</name>
        <name evidence="4" type="ORF">PPSC2_09720</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial ribosomal protein bS16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370647.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22185"/>
    <dbReference type="EnsemblBacteria" id="ADO56032">
        <property type="protein sequence ID" value="ADO56032"/>
        <property type="gene ID" value="PPSC2_09720"/>
    </dbReference>
    <dbReference type="GeneID" id="66577994"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2048"/>
    <dbReference type="eggNOG" id="COG0228">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100590_5_0_9"/>
    <dbReference type="OMA" id="GFYNPIA"/>
    <dbReference type="OrthoDB" id="1937072at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00385">
        <property type="entry name" value="Ribosomal_S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000307">
        <property type="entry name" value="Ribosomal_S16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020592">
        <property type="entry name" value="Ribosomal_S16_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023803">
        <property type="entry name" value="Ribosomal_S16_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12919">
        <property type="entry name" value="PTHR12919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00886">
        <property type="entry name" value="Ribosomal_S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54565">
        <property type="entry name" value="SSF54565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00002">
        <property type="entry name" value="S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00732">
        <property type="entry name" value="RIBOSOMAL_S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10254" checksum="4FC71787B13CDD36" modified="2011-01-11" version="1">MAVRIRLKRMGAHKAPFYRVVVSDSRSPRDGRFIEEIGYYNPITVPAVVKIDEDKALKWLQDGAQASDTVRNLLSKAGVLKKFHELKTQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB6</accession>
    <name>E3EGB6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polyketide synthase regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cdaR</name>
        <name evidence="2" type="ORF">PPSC2_00810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368789.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13800"/>
    <dbReference type="EnsemblBacteria" id="ADO54144">
        <property type="protein sequence ID" value="ADO54144"/>
        <property type="gene ID" value="PPSC2_00810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.150"/>
    <dbReference type="eggNOG" id="COG2508">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064483_0_0_9"/>
    <dbReference type="OMA" id="FFQLDCN"/>
    <dbReference type="OrthoDB" id="1439158at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2840">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025736">
        <property type="entry name" value="PucR_C-HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042070">
        <property type="entry name" value="PucR_C-HTH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13556">
        <property type="entry name" value="HTH_30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_30" evidence="1">
        <location>
            <begin position="316"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="380" mass="43809" checksum="4500DFDDD46BE048" modified="2011-01-11" version="1">MTLDTEWIQQQLQNIIQAPFTIVPWCPEMMAEGESTDSVIPDRSFVSENKLYFPFRASVGELAAFAVEARYLSDRERKLIEALLGNMEQVWHNGPSLSVNRAYSEEERMNHFGQWLIQQAANLSSKEEVPAELELRDPLSACMVPFLLNGEGTQDGAITYTQLHRLLASYFGGDVLLTPLDEQSWLILARKELLLGADDERDKDTETRETDFAEPLEEVLTAFSLGLYELIANEWVGVFHLAISKPSIPLQSLPHELNLLWETIHLGKLFHVTEHIHLSWEHHLERLLNRIPKEQRVLFLEQVMKSSVILEDSETMATLDIFFQLDCNVSETAKRLYVHRNTLIYRLDKIKQETGLDVRTFNDAVLVKLYLLLYKVTKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGN7</accession>
    <name>E3EGN7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hxlR1</name>
        <name evidence="2" type="ORF">PPSC2_03505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369312.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16305"/>
    <dbReference type="EnsemblBacteria" id="ADO54676">
        <property type="protein sequence ID" value="ADO54676"/>
        <property type="gene ID" value="PPSC2_03505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.686"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_1_9"/>
    <dbReference type="OMA" id="MYDWGKD"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="17"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="15335" checksum="B9DA72E715AEB47E" modified="2011-01-11" version="1">MNITTVKDRIDLKLINCDKELTLAVIGGKWKLIILWHLGMEGTKRFGELKKLIPHITQKMLTNQLRELEEDKLILRTVYPVVPPHVEYSLTEHGESLIPVLRAMYDWGSNYRENVIWKEEKEEVIQDVTPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGP7</accession>
    <name>E3EGP7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MmcQ-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yyaQ</name>
        <name evidence="1" type="ORF">PPSC2_03555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369322.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16365"/>
    <dbReference type="EnsemblBacteria" id="ADO54686">
        <property type="protein sequence ID" value="ADO54686"/>
        <property type="gene ID" value="PPSC2_03555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.696"/>
    <dbReference type="eggNOG" id="COG2315">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105851_1_1_9"/>
    <dbReference type="OMA" id="NKRHWNT"/>
    <dbReference type="OrthoDB" id="1817663at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007351">
        <property type="entry name" value="YjbR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038056">
        <property type="entry name" value="YjbR-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35145">
        <property type="entry name" value="PTHR35145"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04237">
        <property type="entry name" value="YjbR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142906">
        <property type="entry name" value="SSF142906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="14031" checksum="84E0A18D7B0BC62B" modified="2011-01-11" version="1">MFEQIVAYGLSQKEAVKDYPFGADPLVLKVGGKMFALLTEKDGISHVSLKCDPVIAENLREQNKAIKPGYHLNKRHWNTIEVDNSFPLEDLYSMIDHSYELAFKGLTKAQREAITMRIRTTDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGS1</accession>
    <name>E3EGS1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369787.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1175"/>
    <dbReference type="EnsemblBacteria" id="ADO55155">
        <property type="protein sequence ID" value="ADO55155"/>
        <property type="gene ID" value="PPSC2_05700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1161"/>
    <dbReference type="eggNOG" id="ENOG503061T">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2466126_0_0_9"/>
    <dbReference type="OMA" id="ICAHACI"/>
    <dbReference type="OrthoDB" id="1955839at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="88" mass="9986" checksum="B5328DAB00F18811" modified="2011-01-11" version="1">MATLTEAQIRICAHACITRYERGEGDIATIMGSYALNEEQREQVMKIILFKRSDLVAGNVETSSSTDAPNEQKETVKWYNSIFRKKTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGU6</accession>
    <name>E3EGU6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Capsular biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ywqC</name>
        <name evidence="8" type="ORF">PPSC2_05795</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18760"/>
    <dbReference type="EnsemblBacteria" id="ADO55180">
        <property type="protein sequence ID" value="ADO55180"/>
        <property type="gene ID" value="PPSC2_05795"/>
    </dbReference>
    <dbReference type="GeneID" id="66573782"/>
    <dbReference type="KEGG" id="ppm:PPSC2_05795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1187"/>
    <dbReference type="eggNOG" id="COG3944">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082668_2_1_9"/>
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    </dbReference>
    <dbReference type="GO" id="GO:0016021">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="project" value="InterPro"/>
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    </dbReference>
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        <location>
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            <end position="194"/>
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    </feature>
    <feature type="domain" description="Wzz" evidence="7">
        <location>
            <begin position="6"/>
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        <source>
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        </source>
    </evidence>
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        <source>
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    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="247" mass="26875" checksum="D785ED8CD3F2596B" modified="2011-01-11" version="1">MEKTILDYLVLIKKRLWLIAIFVILSCVTTYIVSDNVVKPVYSASSQLLVNHISAKQGSNNLNDVNTSLNLVESYKQILTSPKIMDAVVATHPEFNLTSQKLAEKLQIKSSDKSQVIGLTFEAGNYPQAAAVVNAVTQKFVQTVPGLMELNNVKILNEADPQANPDPINGNPLMNIAISFLVSLMIALGTIVFLESINGTLRTEKEADADIGIPVIASIPVIRKKDIDGVAGNSKERVGERKYAAIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGV4</accession>
    <name>E3EGV4_PAEPS</name>
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        <submittedName>
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        </submittedName>
    </protein>
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    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
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        <property type="protein sequence ID" value="ADO55188.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18800"/>
    <dbReference type="EnsemblBacteria" id="ADO55188">
        <property type="protein sequence ID" value="ADO55188"/>
        <property type="gene ID" value="PPSC2_05835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1195"/>
    <dbReference type="eggNOG" id="COG2244">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050201_0_0_9"/>
    <dbReference type="OrthoDB" id="564091at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029303">
        <property type="entry name" value="Polysacc_synt_C"/>
    </dbReference>
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        <property type="entry name" value="Polysacc_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="30"/>
            <end position="50"/>
        </location>
    </feature>
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        <location>
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        </location>
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        </location>
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        </location>
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        <location>
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            <end position="423"/>
        </location>
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    <feature type="domain" description="Polysacc_synt_C" evidence="7">
        <location>
            <begin position="347"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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            <dbReference type="Pfam" id="PF14667"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO55188.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="459" mass="50608" checksum="081F0668F2AC5206" modified="2015-05-27" version="2">MQNLQALSAPVRTLWSTVIRFAKSKDNSSAAVKTMIFSMLILVVNMLTGVLTARFLGPTGRGEQTAMVNWSQFLAFCMSFGVPSALIYNAKRKPEETGKLYGLALLLATVFGGMATLIGVFLIPYWLRSFSSSVILFAQCSMMMCPLIAISQINNALLQVRSEYKQYNLFRYLVPLSTLLGLAILILTGTMNPYTSALAYLLPGLPIYIGVTIRMIRLYKPKVKNSWTQFKNLFTYGMGSYGNDLMGQVSTYIDQILIAGLLRPADLGLYAVAVSLARMVNVFSTSIIVVLFPKASGLDKEEAVAITFRAFRVTSTATFLAAVMLMLVAPFVFTLLYGQEFKQALTVFRFLVLEVAISGGTMVLAQQFMALGKPKLVTILQGVGLALVIPLLSILVPRYGLTGAGIAMLSSGILRFVFILCNVKFVLKMKIPRLVISKQDFQWLRSTMSHYIRKKPVNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGW7</accession>
    <name>E3EGW7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific protein-tyrosine kinase</fullName>
            <ecNumber evidence="3">2.7.10.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yveL</name>
        <name evidence="10" type="ORF">PPSC2_05895</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-tyrosyl-[protein] = ADP + H(+) + O-phospho-L-tyrosyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:10596"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.10.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CpsD/CapB family.</text>
    </comment>
    <dbReference type="EC" id="2.7.10.2" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369833.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18860"/>
    <dbReference type="EnsemblBacteria" id="ADO55201">
        <property type="protein sequence ID" value="ADO55201"/>
        <property type="gene ID" value="PPSC2_05895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1207"/>
    <dbReference type="eggNOG" id="COG0489">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052027_2_1_9"/>
    <dbReference type="OMA" id="NPVSEQF"/>
    <dbReference type="OrthoDB" id="1184929at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004715">
        <property type="term" value="F:non-membrane spanning protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045226">
        <property type="term" value="P:extracellular polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005702">
        <property type="entry name" value="EPS_synthesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
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        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01007">
        <property type="entry name" value="eps_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
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    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0829">Tyrosine-protein kinase</keyword>
    <feature type="domain" description="AAA_31" evidence="9">
        <location>
            <begin position="41"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="25055" checksum="8B1D371E6E15D177" modified="2011-01-11" version="1">MPRLINNQLVTSLHAQSSVSEEYRMLRTNIQFSSIDEPIEVMMVASAQAGEGRTVTISNLAVTYAQEGKKVLVMDMDLRRSSLHHMFGLRNHTGLTRVLANQQTWQDVVQETGIDHLHAITAGPNPPNPSEMLSSRRMKALLVELKEHYDVILMDTPPLLSFPDGLIVSAMCDGVILVVQAGKVKKDVVKKAKANLERVKARILGVVLNNVKRRAERGVEERNLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH24</accession>
    <name>E3EH24_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370211.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1607"/>
    <dbReference type="EnsemblBacteria" id="ADO55584">
        <property type="protein sequence ID" value="ADO55584"/>
        <property type="gene ID" value="PPSC2_07670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1589"/>
    <dbReference type="eggNOG" id="ENOG50334YU">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2155867_0_0_9"/>
    <dbReference type="OMA" id="YKHHENK"/>
    <dbReference type="OrthoDB" id="2023044at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="12446" checksum="52789AF36F20F10F" modified="2011-01-11" version="1">MKKYGIAIFIATLFASIWILSSYTKSYTQNEVFSYLIKDQGYKPSEIYSVETQIAKAPLISTQVIFKDEIDARYFYKKEQGKIIQYNQAPIKGVDDGAYIYKHHENK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH62</accession>
    <name>E3EH62_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Coproporphyrinogen III oxidase</fullName>
            <ecNumber evidence="6">1.3.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hemY1</name>
        <name evidence="8" type="ORF">PPSC2_08875</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in coproporphyrin-dependent heme b biosynthesis. Catalyzes the oxidation of coproporphyrinogen III to coproporphyrin III.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>coproporphyrinogen III + 3 O2 = coproporphyrin III + 3 H2O2</text>
            <dbReference type="Rhea" id="RHEA:43436"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:57309"/>
            <dbReference type="ChEBI" id="CHEBI:131725"/>
            <dbReference type="EC" id="1.3.3.15"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 6">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="6">Porphyrin-containing compound metabolism; protoheme biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the protoporphyrinogen/coproporphyrinogen oxidase family. Coproporphyrinogen III oxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.3.15" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370471.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21340"/>
    <dbReference type="EnsemblBacteria" id="ADO55853">
        <property type="protein sequence ID" value="ADO55853"/>
        <property type="gene ID" value="PPSC2_08875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1871"/>
    <dbReference type="eggNOG" id="COG1232">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009629_3_0_9"/>
    <dbReference type="OMA" id="WFDQWFG"/>
    <dbReference type="OrthoDB" id="630753at2"/>
    <dbReference type="UniPathway" id="UPA00252"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004729">
        <property type="term" value="F:oxygen-dependent protoporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006783">
        <property type="term" value="P:heme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004572">
        <property type="entry name" value="Protoporphyrinogen_oxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00562">
        <property type="entry name" value="proto_IX_ox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6" id="KW-0274">FAD</keyword>
    <keyword evidence="2 6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 6" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="7">
        <location>
            <begin position="15"/>
            <end position="463"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="481" mass="52937" checksum="C5BD4259861757DE" modified="2011-01-11" version="1">MEQKLRNIVIVGGGLTGLSTAFYTRKMYKEAGYTPRITLVEKASALGGKIETLHKDGFVIEKGPDSFLARKTAMIDLAKELEMDHELVSTNPEAKKTYILHEGQLHPMPPGLVLGIPTELKPFLRSGLISLGGKMRAMMDFVIPPRREPGDEALGDFIERRLGKEVLENVTEPLLAGIYAANMKTLSLQATFPQFAEVEQQYGSLIHGMRTGRKPAETHTGTKKSAFLTFRQGLQSLVHALLNDLYDCDLRTGIAVTEFTKTTETKGSPYCVMLDNGETLEADDIFVTTPNFAAAPLLRDHVNVSALEAVNYVSVANVVMAFDKTDIENIFDGSGFLVPRKEGRSVTACTWTSAKWLHTSPDDKVLLRCYVGRAGAEETVDLPDNELIAVVRKDLKEMMGVTATPLFTEITRLRNSMPQYPVGHPQAIANLREELRSAMPGVYVLGAGYDAIGLPDCIRQAKEWASKAVHTAQREAVKVQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHG7</accession>
    <name>E3EHG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polysaccharide deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylxY</name>
        <name evidence="2" type="ORF">PPSC2_10135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370729.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22605"/>
    <dbReference type="EnsemblBacteria" id="ADO56120">
        <property type="protein sequence ID" value="ADO56120"/>
        <property type="gene ID" value="PPSC2_10135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2136"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064035_0_0_9"/>
    <dbReference type="OMA" id="KWFAPPS"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NodB homology" evidence="1">
        <location>
            <begin position="142"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="37333" checksum="D1212CA269D520E4" modified="2011-01-11" version="1">MMSRVKRAVWVVATLAITLVIGQFSGVRDYASQLRNGDATGAEELEATPTMAVVALPDNALMQRLKTEATRQRREPVDAKIDRVWKAIPGYNGLEVDLDATYRKAIAAPDRPIQYVYRQLAPKIHLNQLGNVPIYRGNPEKPMVSFMINVAWGNEFIVPILDTLDQEKVKATFFLDGSWLKKNPELAKEIQRRGHELSNHAYSHPNMSRLSRARAVQEIEKTEELLQQTLGVKNNWFAPPSGDFNQQTVDIAAEHGLKTVLWTLDTVDWKHPSPQSVVHKINSKVESGSLILMHPTDSSAAALKGMIHAIRSKGLVLGTVSQTLSPDRQLPAPVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHJ2</accession>
    <name>E3EHJ2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Regulatory protein RecX</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">recX</name>
        <name evidence="6" type="ORF">PPSC2_10250</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">Modulates RecA activity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the RecX family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370754.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22720"/>
    <dbReference type="EnsemblBacteria" id="ADO56145">
        <property type="protein sequence ID" value="ADO56145"/>
        <property type="gene ID" value="PPSC2_10250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2160"/>
    <dbReference type="eggNOG" id="COG2137">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066607_4_1_9"/>
    <dbReference type="OMA" id="DHEELMI"/>
    <dbReference type="OrthoDB" id="2025178at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006282">
        <property type="term" value="P:regulation of DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01114">
        <property type="entry name" value="RecX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003783">
        <property type="entry name" value="Regulatory_RecX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33602">
        <property type="entry name" value="PTHR33602"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02631">
        <property type="entry name" value="RecX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="29333" checksum="E42CB091FDE2A926" modified="2011-01-11" version="1">MQLDDKDEFTSEENKQQGISLFPDHEELMITRVEQGQGRKRGRYIIHFGPYSLSVLEDVMIKYNMFKGTSFVKKELEDIVLADEKQQAYVHALRYLGQKPRTRQEIAQRLAQKEVDQAVIDEILVRLQREKLVDDDLYARQWARQRITSQRKGKMWIRQELRQKGISKASIGEALGEITDNEEWESALSVGRKKWNQVRGDIMDKKRKTFPFLMRRGYSGDMTRRVVNHLSAAEQDGAFEDEELLHWEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHW3</accession>
    <name>E3EHW3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371060.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2484"/>
    <dbReference type="EnsemblBacteria" id="ADO56455">
        <property type="protein sequence ID" value="ADO56455"/>
        <property type="gene ID" value="PPSC2_11675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2470"/>
    <dbReference type="eggNOG" id="ENOG50306EG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_194269_1_0_9"/>
    <dbReference type="OMA" id="LAGAYME"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8653" checksum="6735404186FEF200" modified="2011-01-11" version="1">MLYVILVTSILTSLYEFKKFKEKQYVREIVFSSILLIIGVILIILRIVSIKLPTPLTGIQILFQPISRLLTEMLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI32</accession>
    <name>E3EI32_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">M1-852</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-852</name>
        <name evidence="3" type="ORF">PPSC2_03625</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369336.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16445"/>
    <dbReference type="EnsemblBacteria" id="ADO54700">
        <property type="protein sequence ID" value="ADO54700"/>
        <property type="gene ID" value="PPSC2_03625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.710"/>
    <dbReference type="eggNOG" id="COG0265">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_798872_0_0_9"/>
    <dbReference type="OMA" id="NHVLANS"/>
    <dbReference type="OrthoDB" id="1095289at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043504">
        <property type="entry name" value="Peptidase_S1_PA_chymotrypsin"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0720">Serine protease</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="348" mass="37510" checksum="EB11A0CA64BD2E52" modified="2011-01-11" version="1">MLATFSAALQVKKRMAKRVLKMSGVHGIGVGYRDPAHPKRGAAVIVYTDRLASASTGLLSATALGKKSNVPIRIVKTGKIRANATDYRVRIRPVIAGYSVGTIEGSGTTGLIVSPTGEPATRYLFSNNHVLNPSNTDNREATIQPGGADGGTVAQNRIGRLYRYVRLNPTGTNLIDAALSLPTRNNLLNPRYATVGAIPGHVTAYRVGEKLKKVGRTTGRVNGTVESVYTDLQINYGGELGLLTFEDQTVIRGTTPVSLPGDSGSVWLRQSDNYAAAVNYAGTADGRLSIAFPVQWFMQVFNTRVARPSGAGRVLRVDTGSSPRSYTRQLTSEELVRLRPRTTRIRRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG2</accession>
    <name>E3EIG2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH-type transcriptional regulator</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvbF</name>
        <name evidence="2" type="ORF">PPSC2_06225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GbsR family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369906.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EIG2"/>
    <dbReference type="STRING" id="1406.LK13_19180"/>
    <dbReference type="EnsemblBacteria" id="ADO55275">
        <property type="protein sequence ID" value="ADO55275"/>
        <property type="gene ID" value="PPSC2_06225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1283"/>
    <dbReference type="eggNOG" id="COG1510">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127505_0_0_9"/>
    <dbReference type="OMA" id="EMSKTSM"/>
    <dbReference type="OrthoDB" id="1646730at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026282">
        <property type="entry name" value="MJ1563"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006707">
        <property type="entry name" value="MJ1563"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR006707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="22100" checksum="7DF5EA6925F45990" modified="2011-01-11" version="1">MSLYQLGDEQQASLQKIRKRVIEAIGKNMDLYGITLSAGHLYGLLFFADKPMTLDEMGREMEMSKTSMSTGVRTLLDLKMVNKVWSKGSRKDLYEVEYDWYQTFTDFFAIKWRKAVETNLLVLRKAIDELDKLMAQGEEYEEFKAILQQDRMKMKQAVAYYKWLDRLIDSMESEEIYKLIPKEEVRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EII7</accession>
    <name>E3EII7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55625.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025679896.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55625">
        <property type="protein sequence ID" value="ADO55625"/>
        <property type="gene ID" value="PPSC2_07830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1629"/>
    <dbReference type="HOGENOM" id="CLU_2845719_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036493">
        <property type="entry name" value="YunC_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102891">
        <property type="entry name" value="SSF102891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55625.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="7394" checksum="57260910C8352BEA" modified="2015-05-27" version="2">MIHMEPIQVGEHTFIGVEVKLSKTTLLTISNSRGYTMCGASNMYRIWGNKIYCCLILKVKQDKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIS4</accession>
    <name>E3EIS4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein NrdI</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">nrdI</name>
        <name evidence="4" type="ORF">PPSC2_09310</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 3">Probably involved in ribonucleotide reductase function.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the NrdI family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370560.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21780"/>
    <dbReference type="EnsemblBacteria" id="ADO55943">
        <property type="protein sequence ID" value="ADO55943"/>
        <property type="gene ID" value="PPSC2_09310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1961"/>
    <dbReference type="eggNOG" id="COG1780">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114845_3_0_9"/>
    <dbReference type="OMA" id="NTHRFVG"/>
    <dbReference type="OrthoDB" id="1961680at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00128">
        <property type="entry name" value="NrdI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020852">
        <property type="entry name" value="RNR_Ib_NrdI_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004465">
        <property type="entry name" value="RNR_NrdI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37297">
        <property type="entry name" value="PTHR37297"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07972">
        <property type="entry name" value="Flavodoxin_NdrI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005087">
        <property type="entry name" value="NrdI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00333">
        <property type="entry name" value="nrdI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="119" mass="13320" checksum="405D1F56725FBFE8" modified="2011-01-11" version="1">MLIAYDSKTGNVKRFINKLKLPAVQIEEQMTIEEPYVLITYTTGFGQIPERVSSFLKKNAQNLVGVAASGNRNWGDKFAKSADLIADHYNVPVISKFELSGTFGDVERFKQEVSRVAAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIW8</accession>
    <name>E3EIW8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yqjV</name>
        <name evidence="10" type="ORF">PPSC2_09510</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. TCR/Tet family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370604.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2015"/>
    <dbReference type="EnsemblBacteria" id="ADO55987">
        <property type="protein sequence ID" value="ADO55987"/>
        <property type="gene ID" value="PPSC2_09510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2005"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_60_0_9"/>
    <dbReference type="OMA" id="CYGQFES"/>
    <dbReference type="OrthoDB" id="1452500at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="78"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="217"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="253"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="285"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="312"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="342"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="370"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="11"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="45274" checksum="D62E6F2258123599" modified="2011-01-11" version="1">MKEQLRSIHPLAWTIIAGTIFGRMATSMSIPFLSIYLTTRLGVSPFHTGVIVSVSSLVGIFASFYGGYISDRIGRRKVMLVSIASWALVFVAFALAEAAWAFFVINALNGLCRSLFEPTSRALLSDVTPKEKRLLVYNMRYAAINVGVVAGPLLGLMLGSASTGTPFMVAAGVYALYGVLLLIQFTRYAADLHVGTTAGEAPLRMGEAFRTASRDPVFMPILLGTVFCVMGYAHSNSTMPQFLSLSFEEGTRWFTYMLTVNAFCVLAFQYPLVRLASRFSPVNSLIAGNICIAVSLLLCGMLNSGWMFILDMVLFTVGEVLLFTMLDVLIDQIADVQYKGTYFGTIGFNNLGSVLAPLFGGWLLDIYGQTAPLAVFVPVALSVVIGIPFLLVARRRLAQRTARFAAQGGESVQQLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ46</accession>
    <name>E3EJ46_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phosphoesterase</fullName>
            <ecNumber evidence="2">3.1.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_10610</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the metallophosphoesterase superfamily. YfcE family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.-" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370833.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23005"/>
    <dbReference type="EnsemblBacteria" id="ADO56227">
        <property type="protein sequence ID" value="ADO56227"/>
        <property type="gene ID" value="PPSC2_10610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2242"/>
    <dbReference type="eggNOG" id="COG0622">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063749_3_2_9"/>
    <dbReference type="OMA" id="ADTHVPK"/>
    <dbReference type="OrthoDB" id="1355703at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024654">
        <property type="entry name" value="Calcineurin-like_PHP_lpxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000979">
        <property type="entry name" value="Phosphodiesterase_MJ0936/Vps29"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11124">
        <property type="entry name" value="PTHR11124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12850">
        <property type="entry name" value="Metallophos_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00040">
        <property type="entry name" value="yfcE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos_2" evidence="3">
        <location>
            <begin position="1"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="18687" checksum="5A2687EEF2904716" modified="2011-01-11" version="1">MKIIVLSDTHMPHRSKTLPSRLVQELKDSDLILHAGDWTDWFVYERLAEFAPVQGIAGNNDGTDIVERLGYQRIVEAQGKRIGMVHGHGWRGSTENIALNTFKGETLDCLIFGHSHIPVVKKIDNLLVLNPGSPTDKRGEDEYSFIVLTIEDGQMEAQLVLYPDKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ67</accession>
    <name>E3EJ67_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aminoglycoside phosphotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370854.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23085"/>
    <dbReference type="EnsemblBacteria" id="ADO56248">
        <property type="protein sequence ID" value="ADO56248"/>
        <property type="gene ID" value="PPSC2_10690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2264"/>
    <dbReference type="eggNOG" id="COG3173">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084132_0_0_9"/>
    <dbReference type="OMA" id="DLGFHNF"/>
    <dbReference type="OrthoDB" id="888352at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="23"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="32580" checksum="ADB98191A82F7F41" modified="2011-01-11" version="1">MDIQFILNELYEAGVLESHMQNLKPLTGGTSSEVVVVMDGTRPRYVIKQNDPAIVKAEAEFLLTYAQIEKLSRVIYVDSLHRYLVYAFKPGFTRQYSEGNKGDLLLSLATEVIAHYKSLGEEREYGYSDHPFVEWRDFLLHRTKESEKIIQDVLPPENHRFVHILVAGSPQRNLKYLLHGDFGVHNFVFTENGTLTGIIDPDPVVGEPLYDLIYAFCSSPDRLTIDTILPAVETLRPEMTGEYELNREVLQGLYFRIATCIRHHPGDLGQYTEAWNYWLNRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ70</accession>
    <name>E3EJ70_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56357.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_017428465.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23590"/>
    <dbReference type="EnsemblBacteria" id="ADO56357">
        <property type="protein sequence ID" value="ADO56357"/>
        <property type="gene ID" value="PPSC2_11205"/>
    </dbReference>
    <dbReference type="GeneID" id="66577686"/>
    <dbReference type="KEGG" id="ppm:PPSC2_11205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2372"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_181292_1_0_9"/>
    <dbReference type="OMA" id="GLIRATC"/>
    <dbReference type="OrthoDB" id="2067405at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56357.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7494" checksum="304C0B1E351A7EE6" modified="2015-05-27" version="2">MLEKYVGQIVEIVYMDRKGKLSHRQIEVHRVQNGLIRATCLQTGQPRVFRLDHVLAWHPVTRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJN6</accession>
    <name>E3EJN6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386048.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0242"/>
    <dbReference type="EnsemblBacteria" id="ADO59634">
        <property type="protein sequence ID" value="ADO59634"/>
        <property type="gene ID" value="PPSC2_26965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5701"/>
    <dbReference type="HOGENOM" id="CLU_1601080_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="18438" checksum="8DCF58ECFB6F9F07" modified="2011-01-11" version="1">MKKYQAVGMMVELDGGLTKNQVVSLLGKLEDGELLIPFGTSANNSTIYGFLTVPSVDEHLDAVEKTARQLCEDFDNERTDQTYTTETGIQMFIDCELETSRDESAFRVFSSAGKFIDVETNEGTYQHVVICPKPYSPWIHLLKFSNGVVVEVKTGDILETDGNLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK79</accession>
    <name>E3EK79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386202.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0398"/>
    <dbReference type="EnsemblBacteria" id="ADO59788">
        <property type="protein sequence ID" value="ADO59788"/>
        <property type="gene ID" value="PPSC2_26220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5521"/>
    <dbReference type="HOGENOM" id="CLU_2288774_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11743" checksum="E2EB2EE3C9E08C0A" modified="2011-01-11" version="1">MVNSLREQIAERDKTITLIHKELEESEAETKKWCDKFESKKNLLKTTANNRDEWKRMYEDACDSAHKFQIALEEAKEALSWGDLQSSVDQAERIINQALGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKE1</accession>
    <name>E3EKE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0074"/>
    <dbReference type="EnsemblBacteria" id="ADO59468">
        <property type="protein sequence ID" value="ADO59468"/>
        <property type="gene ID" value="PPSC2_27725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5875"/>
    <dbReference type="HOGENOM" id="CLU_2918390_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="7663" checksum="33B03B01E2712D05" modified="2011-01-11" version="1">MNKMKQAIQKLKNRAGYVSVETVIVAGLIIALGAYAISQFYTTSQATTEWSIDNINKIYNVTIKETPIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKY9</accession>
    <name>E3EKY9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386308.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59894">
        <property type="protein sequence ID" value="ADO59894"/>
        <property type="gene ID" value="PPSC2_28690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6088"/>
    <dbReference type="HOGENOM" id="CLU_2555127_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="82" mass="9361" checksum="9CFBDBEBC8404FCC" modified="2011-01-11" version="1">MDTDVLQTAKRKARYGHRDWVYWKDENGDEHTEVKSSSSVKKAMISVGSKGRYFVVCANNGNLMLGNWRMGITMINNTKYGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKZ7</accession>
    <name>E3EKZ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28655</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59902.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886239.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0513"/>
    <dbReference type="EnsemblBacteria" id="ADO59902">
        <property type="protein sequence ID" value="ADO59902"/>
        <property type="gene ID" value="PPSC2_28655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6081"/>
    <dbReference type="HOGENOM" id="CLU_1863220_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59902.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15886" checksum="25103F8BC71DF03C" modified="2015-05-27" version="2">MDREIKFAWGRLLGETLRVQKRVDPSMVQASDATIYGLLNGFETVVDAQLSVNEPITESDLNNMARILEPYHQNPDTLRGYYTIEPEVDAANITRLKAMMILTYFKSEGRFEEVIRRMNTEHSPGECREFEIRQEEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC82</accession>
    <name>A0A0D5ZC82_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">marR1</name>
        <name evidence="2" type="ORF">PPSC2_03390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675712.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44184">
        <property type="protein sequence ID" value="AKA44184"/>
        <property type="gene ID" value="PPSC2_03390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.659"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_18_6_9"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16511" checksum="DD5791C246D2C1DF" modified="2015-05-27" version="1">MFNLENCLAFITNRSGKIFSEALEKEFRPYNITRSQWIAMYYIYTHKSMTQRELAEELSIKEPSVVRLLQKLEAEGYLLRSIDDTDKRMKQIQLSDLGTQVCLKLLPIAEKFKQDTIAGISQDDLHTFESVLQRMVDNTRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCE9</accession>
    <name>A0A0D5ZCE9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44246">
        <property type="protein sequence ID" value="AKA44246"/>
        <property type="gene ID" value="PPSC2_12570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2668"/>
    <dbReference type="HOGENOM" id="CLU_191648_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="82" mass="8996" checksum="AD3ABCA877D23F92" modified="2015-05-27" version="1">MVGYVTGGIGQFNITQITQRCLTLKGFRVGSTEHMEQMVAAVEQSNLKPAIDSIYDIDNIRDAFSRLSSGGKFGKICVRVAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCG9</accession>
    <name>A0A0D5ZCG9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L28</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rpmB</name>
        <name evidence="6" type="ORF">PPSC2_15395</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial ribosomal protein bL28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013310881.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03045"/>
    <dbReference type="EnsemblBacteria" id="AKA44269">
        <property type="protein sequence ID" value="AKA44269"/>
        <property type="gene ID" value="PPSC2_15395"/>
    </dbReference>
    <dbReference type="GeneID" id="66576901"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3289"/>
    <dbReference type="HOGENOM" id="CLU_064548_7_1_9"/>
    <dbReference type="OrthoDB" id="2062238at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.170.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00373">
        <property type="entry name" value="Ribosomal_L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034704">
        <property type="entry name" value="L28p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026569">
        <property type="entry name" value="Ribo_L28/L24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037147">
        <property type="entry name" value="Ribo_L28/L24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001383">
        <property type="entry name" value="Ribosomal_L28"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00830">
        <property type="entry name" value="Ribosomal_L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143800">
        <property type="entry name" value="SSF143800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00009">
        <property type="entry name" value="L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="AKA44269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="6884" checksum="D3E7F79AEA992CC2" modified="2015-05-27" version="1">MSRKCSVTGKKPGSGNHVSHANNRNRRTWGVNVQKVRILVNGKPKRVYVSTRALKAGKVTRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCP3</accession>
    <name>A0A0D5ZCP3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886225.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44339">
        <property type="protein sequence ID" value="AKA44339"/>
        <property type="gene ID" value="PPSC2_26015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5472"/>
    <dbReference type="HOGENOM" id="CLU_2070778_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="118" mass="13445" checksum="D08D736EE36195DE" modified="2015-05-27" version="1">MFIGIPYVSTLEDMSDSITKDTYPFITFRVQQDNEIVSNVTIPHCRFRATDYENLIEGRSCDCGGSICGHPTQSLYLSKSQLKNYILVEEQSSIAYVFVYQIANQIAINNNQVRDDSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-09-29" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCT1</accession>
    <name>A0A0D5ZCT1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905852.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44379">
        <property type="protein sequence ID" value="AKA44379"/>
        <property type="gene ID" value="PPSC2_27400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5799"/>
    <dbReference type="HOGENOM" id="CLU_573394_0_0_9"/>
    <dbReference type="OrthoDB" id="1184929at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="53093" checksum="29CA59C83A4C090B" modified="2015-05-27" version="1">MKKILVASGQRGIDDAVRKFENYEVVGAIEYKNEVYEAIGALHPEILLIGEGLVGHESLMQLMLKIVKDYPHLRIVYLAGFVDLRDESKVSALGVMVMAGIYDIVHEQRITVPSLRNILDHPKNEEQMAYLTKRVKEQSAKNRNMIEFEIPEENLEQDEDVYKNLTFISSIKPGTGKSFVSTNIAAAIAHFGVEVNGRKPKVGLIEGDLQNLSVGTILQIDDDKKNLKTVIDKISTVVNENGSLIGDMKETERVNKFIKSCFKPYYHAKNLEALVGSQLSFSQMENVKPYHYVYLIDSIIHEYDVVIVDSNSSFTHVTTFPLLHMSKNCYYVVNLDFNNVRNNTRYKDLLKEIGVSDKVKYILNENVEKDSPGSGNDLEELIFTADHLDDSDFKLEARVPMLPKTVFLNRLYEGTPVVLDKNIPYTLKARYELMKVANQIWPIKNFNEIEQEVLNSKTKKKKGLFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S7</accession>
    <name>E3E4S7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371653.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3095"/>
    <dbReference type="EnsemblBacteria" id="ADO57055">
        <property type="protein sequence ID" value="ADO57055"/>
        <property type="gene ID" value="PPSC2_14495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3093"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081766_0_1_9"/>
    <dbReference type="OMA" id="EFYFVPN"/>
    <dbReference type="OrthoDB" id="1832083at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="14"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="296" mass="34335" checksum="2311529A91992AAE" modified="2011-01-11" version="1">MHIVINQKEYAFQKGIRDDHKIKTSFNELAKQSFGFDFEAWFQLGDWEDRYIPYVLLDEDCVVANVSVSLMDFDVSGEKKKYIQIGTVMTDANYRNQGLSRFLVEQALKDWHGNCDGIYLFGNDSVRDFYPKFGFASAPEYQYSRKAPNSLDIRIEKLNTEEMSDLQLLKMKSADFNPYSLFSAENNEWLVLFYSTLFFKDKFWHIPQYDTIVVADFEGDTMNCYDIFGAGDISLDEILGAVMKKDTKKVVFGFTPKEQDGCEMSVLKQEDTTLFYMTKHPNRCNENPLNPILSRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U7</accession>
    <name>E3E4U7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Chorismate synthase</fullName>
            <shortName evidence="6">CS</shortName>
            <ecNumber evidence="6">4.2.3.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">5-enolpyruvylshikimate-3-phosphate phospholyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">aroC</name>
        <name evidence="7" type="synonym">aroF</name>
        <name evidence="7" type="ORF">PPSC2_14590</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>5-O-(1-carboxyvinyl)-3-phosphoshikimate = chorismate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21020"/>
            <dbReference type="ChEBI" id="CHEBI:29748"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57701"/>
            <dbReference type="EC" id="4.2.3.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>FMNH2</name>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
        </cofactor>
        <text evidence="6">Reduced FMN (FMNH(2)).</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 7/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the chorismate synthase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.5" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371672.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02240"/>
    <dbReference type="EnsemblBacteria" id="ADO57075">
        <property type="protein sequence ID" value="ADO57075"/>
        <property type="gene ID" value="PPSC2_14590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3113"/>
    <dbReference type="eggNOG" id="COG0082">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034547_2_0_9"/>
    <dbReference type="OMA" id="MLSINAV"/>
    <dbReference type="OrthoDB" id="981870at2"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004107">
        <property type="term" value="F:chorismate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd07304">
        <property type="entry name" value="Chorismate_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00300">
        <property type="entry name" value="Chorismate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000453">
        <property type="entry name" value="Chorismate_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035904">
        <property type="entry name" value="Chorismate_synth_AroC_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21085">
        <property type="entry name" value="PTHR21085"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01264">
        <property type="entry name" value="Chorismate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001456">
        <property type="entry name" value="Chorismate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103263">
        <property type="entry name" value="SSF103263"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00033">
        <property type="entry name" value="aroC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0274">FAD</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2 6" id="KW-0288">FMN</keyword>
    <keyword evidence="5 6 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 6" id="KW-0521">NADP</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="132"/>
            <end position="134"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="252"/>
            <end position="253"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="312"/>
            <end position="316"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="338"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="389" mass="43083" checksum="0C98B66B42977297" modified="2011-01-11" version="1">MSLRYLTAGETHGPQLTAIVEGMPSNLKLDFEELNFQLHRRQKGYGRGRRMQIEKDTAKIAGGVRHGYTTGAPIALVVENNDWKHWQNIMNIEPIEGSDEEKRRVHRPRPGHADLNGGMKYNLKDLRNVLERSSARETAIRVACGGLARQLLAEFGIKVAGQVIRIGEIEAPYHDLPIDELIAVTEASSVRVTDPETEKKMEAYIDLIKQEGDSVGGVVECIVEGVPIGLGSHVQYDRKLDARIAQGVMSINAFKGVEIGIGFEAGELRGSQVHDEILYDEERGYHRRTNRLGGFEGGMTNGMPVVVRGVMKPIPTLYKPLQSVDIDTKEAFTAQVERSDACAVPAASVVMEHVVAWEIAKALLEKFGGDSIEEIRANIASYEQQLEQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5E7</accession>
    <name>E3E5E7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Molybdenum ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">modA1</name>
        <name evidence="5" type="ORF">PPSC2_17350</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein ModA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372247.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04690"/>
    <dbReference type="EnsemblBacteria" id="ADO57666">
        <property type="protein sequence ID" value="ADO57666"/>
        <property type="gene ID" value="PPSC2_17350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3707"/>
    <dbReference type="eggNOG" id="COG0725">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065520_3_1_9"/>
    <dbReference type="OMA" id="VCAPQVP"/>
    <dbReference type="OrthoDB" id="1506401at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015689">
        <property type="term" value="P:molybdate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13537">
        <property type="entry name" value="PBP2_YvgL_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005950">
        <property type="entry name" value="ModA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041879">
        <property type="entry name" value="YvgL-like_PBP2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004846">
        <property type="entry name" value="ModA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01256">
        <property type="entry name" value="modA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168006" evidence="4">
        <location>
            <begin position="29"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="158"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="203"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR004846-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="29420" checksum="917284A18C7BEE9C" modified="2011-01-11" version="1">MKKRFGYIFTFVGLLAWVLAGCSSPAAVQSTPSAPKTELIVSAAASLQDSLNTLKDQYEKQHPDIKLTFNYASSGTLQKQIEQGAPADVFISAGMKQMKVLTDVSLVEKDSVLLQNKLVVVVPQDKANSTDNKSITLNDLTNPSFLKLAVGEPTTVPAGQYSKESLTKAGLWDKLEPKMVFAKDVRQVLNYVETGNADAGLVYLTDAKSSDKTVVALEVPEELHAPILYPEGIVKATKHSKEAGEFVDFLRTDEAMSVFSKDGFSAPTEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5L7</accession>
    <name>E3E5L7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ankyrin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372473.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3943"/>
    <dbReference type="EnsemblBacteria" id="ADO57894">
        <property type="protein sequence ID" value="ADO57894"/>
        <property type="gene ID" value="PPSC2_18410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3942"/>
    <dbReference type="eggNOG" id="COG0666">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000134_39_0_9"/>
    <dbReference type="OMA" id="VTPFGTW"/>
    <dbReference type="OrthoDB" id="1360387at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="SSF48403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="41"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="104"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="18987" checksum="BD87173F28D285F4" modified="2011-01-11" version="1">MDKVQSAKDIRGAIKSGQLDRLRDLLEKEPEMLTWMTPFGTWLHVAAAYGHLEIIKYLISAGIDTNAQGGTFSTNALERAATKGHLNIAEYLINQNVEIDTSEPDRNPLFAAIYGGHFEIVKLLVENNIDVSIKYSGYNMKDMDAYAFAIERGQTEIAEYLKQKMDGKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5U3</accession>
    <name>E3E5U3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Hydroxyethylthiazole kinase</fullName>
            <ecNumber evidence="9">2.7.1.50</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">4-methyl-5-beta-hydroxyethylthiazole kinase</fullName>
            <shortName evidence="9">TH kinase</shortName>
            <shortName evidence="9">Thz kinase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">thiM</name>
        <name evidence="10" type="ORF">PPSC2_19705</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphooxyethyl)-thiazole + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24212"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17957"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58296"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Cofactor biosynthesis; thiamine diphosphate biosynthesis; 4-methyl-5-(2-phosphoethyl)-thiazole from 5-(2-hydroxyethyl)-4-methylthiazole: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the Thz kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.50" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372734.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06925"/>
    <dbReference type="EnsemblBacteria" id="ADO58162">
        <property type="protein sequence ID" value="ADO58162"/>
        <property type="gene ID" value="PPSC2_19705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4201"/>
    <dbReference type="eggNOG" id="COG2145">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019943_0_0_9"/>
    <dbReference type="OMA" id="KRPLVHN"/>
    <dbReference type="OrthoDB" id="1717689at2"/>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00139"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004417">
        <property type="term" value="F:hydroxyethylthiazole kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01170">
        <property type="entry name" value="THZ_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00228">
        <property type="entry name" value="Thz_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000417">
        <property type="entry name" value="Hyethyz_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02110">
        <property type="entry name" value="HK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000513">
        <property type="entry name" value="Thz_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01099">
        <property type="entry name" value="HYETHTZKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00694">
        <property type="entry name" value="thiM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="9">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="171"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="28838" checksum="97674A05E4CECC2D" modified="2011-01-11" version="1">MMSIWEQSYSDLLTKVQNSNPLVHNITNVVVTNFTANGLYALGASPVMAYAPEEVADMAKIAGAVVLNIGTLNRELVDAMIIAGQSANAHGVPVLLDPVGAGATSFRTESALRILKEVKISLVRGNAAEVAHLIGEVREIKGVDAGNSADSSNVDLAVRAAQTLHTMVVITGKEDVITDGVEVRLISGGDALLTKVTGTGCLLTSVLGAFAAIEPNLLLAGTAGLAFYGAAASRAAAHTAKLGPGSFQIAFLDELAKLHTGSLEGHVTIREAGTSTTGGAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E694</accession>
    <name>E3E694_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Spore gernimation protein GerQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gerQ</name>
        <name evidence="1" type="ORF">PPSC2_13185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371383.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00860"/>
    <dbReference type="EnsemblBacteria" id="ADO56779">
        <property type="protein sequence ID" value="ADO56779"/>
        <property type="gene ID" value="PPSC2_13185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2807"/>
    <dbReference type="eggNOG" id="ENOG5032T03">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117571_1_0_9"/>
    <dbReference type="OMA" id="YQYPGVI"/>
    <dbReference type="OrthoDB" id="1876152at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014099">
        <property type="entry name" value="Spore_coat_GerQ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09671">
        <property type="entry name" value="Spore_GerQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02728">
        <property type="entry name" value="spore_gerQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="17765" checksum="4F377219D58F2658" modified="2011-01-11" version="1">MISQQAYRPVSYASGNGYPEWPRGMAPTGTMQPMQPMQPMQPMTGFPPQVSSGSPMTPTGTVVQVQTPQYEQSYIENILRLNLGKTGTFYMTYENNREWNAKIFKGILEAAGRDHIIISDPATGKRTILLMLNLDYATFDEPLLYQYPGVIGNPGGSPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6A8</accession>
    <name>E3E6A8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57977.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025365581.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05980"/>
    <dbReference type="EnsemblBacteria" id="ADO57977">
        <property type="protein sequence ID" value="ADO57977"/>
        <property type="gene ID" value="PPSC2_18765"/>
    </dbReference>
    <dbReference type="GeneID" id="66576312"/>
    <dbReference type="KEGG" id="ppm:PPSC2_18765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4021"/>
    <dbReference type="eggNOG" id="ENOG502Z86T">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_380676_0_0_9"/>
    <dbReference type="OrthoDB" id="112612at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57977.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="722" mass="81881" checksum="40399CA4D3F19ECD" modified="2015-05-27" version="2">MEIIYQTNRTMLFEEINPEKLDLITIVGDVKGIDSLSDEKIKEINQHLLVRSFDEFLDKFSPTVYSFFNAANQKVVYTLKKPEGIDEDSISEIRINQSNDFLKMLFTLIDTKRSQGITNVDFKFENLLDMISPKKVMDDIRQVRKEIHYMYGEYDKLDDGDPKKLDMGDKLNAMFEEASQNYNNVMAMLPLAIEDIKTRLLLGGAQEENAGELIQVGMLSIGESGELKIIEAPKSESTELMLLDENSTGDLSQVFEEDYNSITDTPSDYVKDLVVRTFVPLPAVQTKVDTAVEVQNYNTYLEFYKNAKDDFVKAVKPLVEKILGVKMFFDQYATKSKGMLPTMLVANNKLDMLVKSSNIPRLETYLNTVNAKNEFSDTIWFGIVPSIELEAAGKVKVSRERFKGNEKVVKQGGNSMESLSMLLQVVKDYKIQMFFNFESGEETTFNSMATAGIDKYVDKCASLVRREYSEFAIPCVPNFTIIPKDKSGVIIDSKMLQTEDGVQLSKEKEDILKLWIEGVYVGAAYVAAGLVASYQCPEYLRETFKTVNKNFPGVRFDIEAGDNSLRTVTTMAKEITGFTNTIKDAINRKNFGFVFSSENAQIQDKDIRRITVYKARSMAMSEDGFDSIYKTLVSTYIERILRYQTGDFKHENIVRFFSNNPSSQKSKWLSSRGSVNSIIQDGDDMSFIIDEKSNMCHIDLVFNGNVKNLEVMITKGTSSVKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H1</accession>
    <name>E3E6H1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DinB_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58040.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4090"/>
    <dbReference type="EnsemblBacteria" id="ADO58040">
        <property type="protein sequence ID" value="ADO58040"/>
        <property type="gene ID" value="PPSC2_19055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4083"/>
    <dbReference type="eggNOG" id="COG2318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137351_0_0_9"/>
    <dbReference type="OrthoDB" id="1759689at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024775">
        <property type="entry name" value="DinB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12867">
        <property type="entry name" value="DinB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DinB_2" evidence="1">
        <location>
            <begin position="8"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58040.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="136" mass="15839" checksum="67150B9A1577D117" modified="2015-05-27" version="2">MHFLLYSDELTCEPIAGKWSIQDVVSHIMGWDNNFTKALIQIIDKGQVMLKEHPDVHTFNDSSVAFGRTMKPHDLLNEAIAQRKQMIAKLQMVSESDFMRPVPNSLYTLETFLQEMFVQHDRHHKEQIMNSLQVIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L8</accession>
    <name>E3E6L8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Aminotran_1_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_20235</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372850.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07490"/>
    <dbReference type="EnsemblBacteria" id="ADO58278">
        <property type="protein sequence ID" value="ADO58278"/>
        <property type="gene ID" value="PPSC2_20235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4312"/>
    <dbReference type="eggNOG" id="COG0436">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052346_1_0_9"/>
    <dbReference type="OMA" id="VWGFRVG"/>
    <dbReference type="OrthoDB" id="417859at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="64"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="432" mass="48069" checksum="DB60FB21648DDD9E" modified="2011-01-11" version="1">MNPLAAQLNQNIQTGNEHVYQMLSLLGKEIYFPKEGILSQSAEAGKLAKKYNATIGIATEGNGPMHLEVIQEKLSAYSPKDLYPYAPPAGKPELRSVWRDKMLKENPSLAGKGYGLPVVTNALTHGLSIVADLFTDEGDAVIYPDKNWENYELTFGIRRHGRLVNFPLFTEDHRFNSEGLREALLAQKEYGKAIVVLNFPNNPTGYTPGIEEGKAIVAAIQEAAEAGINVVVVTDDAYFGLFFEDSLHESLFGQLAGLHPRILPVKIDGATKEEFVWGFRVGFITFASEHQDVLNALEQKTLGIIRATISSGPHPSQTFVLDALKSPDFEQQKNEKFQIMKGRANKVKALLDSGKYGDVWSYYPFNSGYFMCLKLNGLSAERLRTHLLEQYGVGTIALGEYDLRIAFSCIEEEYLEDLYDIVYRGAQDLLNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E747</accession>
    <name>E3E747_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ATP synthase I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">atps1</name>
        <name evidence="7" type="ORF">PPSC2_23280</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373439.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10770"/>
    <dbReference type="EnsemblBacteria" id="ADO58902">
        <property type="protein sequence ID" value="ADO58902"/>
        <property type="gene ID" value="PPSC2_23280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4929"/>
    <dbReference type="eggNOG" id="ENOG50316I0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147331_1_1_9"/>
    <dbReference type="OMA" id="FHEIAVM"/>
    <dbReference type="OrthoDB" id="1969481at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005598">
        <property type="entry name" value="ATP_synth_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03899">
        <property type="entry name" value="ATP-synt_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="13836" checksum="6C1616BF272EC9A7" modified="2011-01-11" version="1">MNEMTRMQKMLWIVALMIMALCFLVSAFMPQHRDIAHGIILGTGVSCLNVLYMAYKIRQVASAAAGEGKKKKVGIGFGVRLATSILAVVLAMEFPAYFHEIAVMASLVTGQFLLLIIGIIFTLQEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C8</accession>
    <name>E3E7C8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">NAD(P)H-nitrite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nirB</name>
        <name evidence="6" type="ORF">PPSC2_24380</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373673.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11875"/>
    <dbReference type="EnsemblBacteria" id="ADO59139">
        <property type="protein sequence ID" value="ADO59139"/>
        <property type="gene ID" value="PPSC2_24380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5163"/>
    <dbReference type="eggNOG" id="COG1251">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003291_4_4_9"/>
    <dbReference type="OMA" id="IHHFWTF"/>
    <dbReference type="OrthoDB" id="1149616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041575">
        <property type="entry name" value="Rubredoxin_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18267">
        <property type="entry name" value="Rubredoxin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="4">
        <location>
            <begin position="5"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="Rubredoxin_C" evidence="5">
        <location>
            <begin position="314"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF18267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="397" mass="43280" checksum="A5252D446316D03F" modified="2011-01-11" version="1">MDNQHYVIIGGGVAAVNAAKAIRDHDELAEISIYGEESSLPYNRVKLSKALFTDLHSDKILIKKEKWFASQRIHVYSGVKIAAIHAEDCTIETANGQTVAYDKLLLCTGAHNRKLVLDGASLRNVHNIRFRQDADRLKTELRQGDRICIIGGGIQGVETAWSFQQAGYAVTILEASQRLMPRQLDEKASAILTRRVIEQGTQVCLGQGVKRITGTDHVEGVELQDGTVIPCEHVVYSIGIVPNTELARQIGLDIGQGILVNAQMETSSAHIYAAGDVAEFHNRVDGLWESAMEQGKIAGTNMAGTSTAYQRPLPVTLSNSYESPLFSIGLVDEQVCDTSLTRENQVSYTRMFIQNGSICGVIGFGDALASLPYKTAIIQGLSPDAPELTKILDDKEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7D8</accession>
    <name>E3E7D8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gsiB3</name>
        <name evidence="2" type="ORF">PPSC2_24430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373683.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11920"/>
    <dbReference type="EnsemblBacteria" id="ADO59149">
        <property type="protein sequence ID" value="ADO59149"/>
        <property type="gene ID" value="PPSC2_24430"/>
    </dbReference>
    <dbReference type="GeneID" id="66575185"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5173"/>
    <dbReference type="eggNOG" id="COG3729">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_142865_6_2_9"/>
    <dbReference type="OMA" id="TSRNHDK"/>
    <dbReference type="OrthoDB" id="2083197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019626">
        <property type="entry name" value="Stress-induced_KGG_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10685">
        <property type="entry name" value="KGG"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="14"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="12567" checksum="481D0134071D2E1D" modified="2011-01-11" version="1">MANNNQNGKMSREEAGRLGGEATAKNHDKEFYQEIGEKGGEATSKSHGKDFYQEIGEKGGEATSKNHGKEFYQEIGRKGGEARGNSDQSDSDGKMSREEAGRKGGEARARQRKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7G9</accession>
    <name>E3E7G9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Beta-xylosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_24570</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glycosyl hydrolase 43 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59180.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324892.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12050"/>
    <dbReference type="EnsemblBacteria" id="ADO59180">
        <property type="protein sequence ID" value="ADO59180"/>
        <property type="gene ID" value="PPSC2_24570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5205"/>
    <dbReference type="eggNOG" id="COG3507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_530850_0_0_9"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000421">
        <property type="entry name" value="FA58C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006710">
        <property type="entry name" value="Glyco_hydro_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00754">
        <property type="entry name" value="F5_F8_type_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04616">
        <property type="entry name" value="Glyco_hydro_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50022">
        <property type="entry name" value="FA58C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168898" evidence="3">
        <location>
            <begin position="33"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="domain" description="F5/8 type C" evidence="4">
        <location>
            <begin position="359"/>
            <end position="513"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59180.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="513" mass="56311" checksum="1C10EE3F87A67C18" modified="2015-05-27" version="2">MKWISNSKSLAAWICIILAVVGAGLQPDAVHANTTGVTQATYGSEMNPSLNGIDAANAELSLNAIASTAITNGTDWKDTAGNPIQANSGNILKVGSTYYWYGEHAENWKFEKVNVYTSTDLKNWSFRSSILTKDSAPELNSSKIERPKVIYNKSTGKYVLWAHYENGTDYSLGRVAVATSDTPDGNFTYQGSFRPLNYESRDMTVFTDTDGSGYLITASRKNGGANDTMAIFKLTADYTGVQSFVGWIFENGYREAPAVVKKNNTYYLFTSQASGWYPNQGAYATASSMTGSWSALSPFGDPAAYGSQIHSIATITGSTGTSYIYMGDRWNPLNLSDHKFIWLPLTLNDSNKTATLNWYSSWDLDAATGKVILPSLVNHAQGKTATASSAASASPASLANDGNPQTSWKATSASWPAWWQVDLGSTKTISEVDISWFMYKGSEAYYKYKIEYSTDGVHYSTIDRTSNTTYGFTSDKVNFQARYVRINLVNAVLFNNPNNWYTPTVHEVRLLGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7P0</accession>
    <name>E3E7P0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371448.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01185"/>
    <dbReference type="EnsemblBacteria" id="ADO56845">
        <property type="protein sequence ID" value="ADO56845"/>
        <property type="gene ID" value="PPSC2_13500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2874"/>
    <dbReference type="eggNOG" id="COG0640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077394_0_0_9"/>
    <dbReference type="OMA" id="RIHIGRY"/>
    <dbReference type="OrthoDB" id="982089at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="35602" checksum="638305E26059591E" modified="2011-01-11" version="1">MSYQIKIDTSPIYELLGSFMAYVTKKWVQDMDLGHEWIDKVDARLQQEVRTELATAQDCPFSDYDALYAWALLRPETDEISDYISYLDHGPDKDMFELLVPHIPFLTFEESLRIRKVYAPLLRLWDRDYFRALEGELRVLAEEDAAEKRMLLSKMEPEALVEYATAGLVVPHMEDLDTVVLFPVVHNRPINSYCFYTRTLLIQYPVDIPEESEEEPPTLLLRLTRAVNDPQRLRILRYVAQGPKSLEDMRHDLSRLEDTLMSDMMILRVAGLLRIHIGRYHKEKFSIRPDGAADLQVFLESYIGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T6</accession>
    <name>E3E7T6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hlyD5</name>
        <name evidence="5" type="ORF">PPSC2_14075</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371569.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01730"/>
    <dbReference type="EnsemblBacteria" id="ADO56969">
        <property type="protein sequence ID" value="ADO56969"/>
        <property type="gene ID" value="PPSC2_14075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3005"/>
    <dbReference type="eggNOG" id="COG0845">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_14_4_9"/>
    <dbReference type="OMA" id="YANIYSP"/>
    <dbReference type="OrthoDB" id="1432684at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168636" evidence="3">
        <location>
            <begin position="30"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="4">
        <location>
            <begin position="62"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="169"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="488" mass="50382" checksum="56048893B0A5CD37" modified="2011-01-11" version="1">MKILRVESTLAALVLGGAVLAGCSSNSGAAQDMVVPVKISQAQQGVIGQGNIYTGTVTPSETVNIVPKVGGKVVELPVDIGSEVKKGQVLFKLDDKDMRNNVAKARAAAAAAAAGVSTAQASHESTMVQATSGLVQSKSGVIQSQSAINQAQGAINQATTAVEQATHSVSSAANTVKQTQQALADAQKNVTRTQSLFDAGASTQAQLEQAKTAVVNAEAAYNNAQNAQANAKDQLIAAQKALTTARNSYESAKNSYSNANSGYSNAQNQLKVSQNTAGIESSQQSLKQAQLNVNIAQDALDDTVVTSPINGIVGTKNAEVGEMVSAQSPALVIANLSTVNTLIYVPAEQINNVKAGDKVQVRVAASNIVTTGTVKNVSPLDASGKGYPVKISVANPDMKLKSGMLADISFVAANAQEGIVIPTAAVQQDQGKEYVYVVNGDHAKRKEVKTVQTTGSQTLITSGLSKEENVIVNNLALLTDNSPITITQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7X6</accession>
    <name>E3E7X6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Thiamine biosynthesis protein ThiH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">thiH</name>
        <name evidence="8" type="ORF">PPSC2_14265</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371608.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01920"/>
    <dbReference type="EnsemblBacteria" id="ADO57009">
        <property type="protein sequence ID" value="ADO57009"/>
        <property type="gene ID" value="PPSC2_14265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3045"/>
    <dbReference type="eggNOG" id="COG0502">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046249_0_0_9"/>
    <dbReference type="OMA" id="LICAYRL"/>
    <dbReference type="OrthoDB" id="419725at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044271">
        <property type="term" value="P:cellular nitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018130">
        <property type="term" value="P:heterocycle biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901362">
        <property type="term" value="P:organic cyclic compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901566">
        <property type="term" value="P:organonitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044272">
        <property type="term" value="P:sulfur compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042364">
        <property type="term" value="P:water-soluble vitamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010722">
        <property type="entry name" value="BATS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024007">
        <property type="entry name" value="FeFe-hyd_mat_HydG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034428">
        <property type="entry name" value="ThiH/NoCL/HydG-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43583">
        <property type="entry name" value="PTHR43583"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43583:SF2">
        <property type="entry name" value="PTHR43583:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06968">
        <property type="entry name" value="BATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00319">
        <property type="entry name" value="Fe_hydrogenase_maturase_(HydG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00876">
        <property type="entry name" value="BATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03955">
        <property type="entry name" value="rSAM_HydG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="80"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="470" mass="53574" checksum="188539D1050EB9CD" modified="2011-01-11" version="1">MSGVREKVSADFINEAEIMAAVEQGKQEATNRQRILEILEKGRACRGLNASEAAALLHVDDPELLEEMFKSSRAVKEQIYGNRIVLFAPLYVSNHCVNNCEYCGYKHTNDSFTRSRLTPEELVEEVRVLQELGHKRLVLEAGEDPVHCPIDYIVDCLRQIYEVKVDNGSIRRINVNIASTTEEDYRKLAEVGIGTYILFQETYHRESYRKFHLQGPKRDFDWHTTAMDRAMRAGIDDVGIGVLYGLYDFRYETVAMLKHAEHLEEVFGCGPHTVSVPRLRPAENVDLERYPYLVNDDDFMKIVSVLRLAVPYAGMILSTREEPEYRDRVIGLGVSQISAGSATGVGAYAKQDTEDKPQFEVGDHRSPSEIIKSLCRGGYMPSYCTACYREGRTGDRFMELAKSGQIHNVCQPNSLLTFQEYLLDYGDEEARELGAAALRENLERIPRESTRRLTLDRLERLEAGERDLYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E828</accession>
    <name>E3E828_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Anti-sigma F factor antagonist</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Stage II sporulation protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">spoIIAA</name>
        <name evidence="7" type="ORF">PPSC2_14895</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">In the phosphorylated form it could act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma f from inhibition.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the anti-sigma-factor antagonist family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013310782.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02530"/>
    <dbReference type="EnsemblBacteria" id="ADO57141">
        <property type="protein sequence ID" value="ADO57141"/>
        <property type="gene ID" value="PPSC2_14895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3178"/>
    <dbReference type="eggNOG" id="COG1366">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_115403_7_0_9"/>
    <dbReference type="OMA" id="SYFKMFN"/>
    <dbReference type="OrthoDB" id="1864829at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043856">
        <property type="term" value="F:anti-sigma factor antagonist activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045152">
        <property type="term" value="F:antisigma factor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003658">
        <property type="entry name" value="Anti-sigma_ant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014237">
        <property type="entry name" value="Anti-sigma_F_ant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00377">
        <property type="entry name" value="ant_ant_sig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02886">
        <property type="entry name" value="spore_II_AA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0749">Sporulation</keyword>
    <feature type="domain" description="STAS" evidence="6">
        <location>
            <begin position="3"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="117" mass="13313" checksum="1DBB71698D7C9F5B" modified="2011-01-11" version="1">MNLQIEMEHHRGVLIVRLSGELDHHTSDMVRMQMDEAIQRRQCEHIVLSLKNLQFMDSSGLGVILGRYKLIKQKGGKMAVCDVNPPVHRLLDMSGLFKIMPIYDNEGNALTELEVVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E870</accession>
    <name>E3E870_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Putative regulatory protein PPSC2_15465</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylzA</name>
        <name evidence="2" type="ORF">PPSC2_15465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RemA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_005548256.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03115"/>
    <dbReference type="EnsemblBacteria" id="ADO57262">
        <property type="protein sequence ID" value="ADO57262"/>
        <property type="gene ID" value="PPSC2_15465"/>
    </dbReference>
    <dbReference type="GeneID" id="66576887"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3304"/>
    <dbReference type="eggNOG" id="COG2052">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_165326_0_0_9"/>
    <dbReference type="OMA" id="RDRNMLI"/>
    <dbReference type="OrthoDB" id="1786332at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01503">
        <property type="entry name" value="RemA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007169">
        <property type="entry name" value="RemA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38449">
        <property type="entry name" value="PTHR38449"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04025">
        <property type="entry name" value="DUF370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9564" checksum="1F6BA16196FEAD4D" modified="2011-01-11" version="1">MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDSDHVILSAVQPETVAHRLSTKDDDNDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E877</accession>
    <name>E3E877_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Metal-dependent phosphoesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">php</name>
        <name evidence="3" type="ORF">PPSC2_15500</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371858.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03150"/>
    <dbReference type="EnsemblBacteria" id="ADO57269">
        <property type="protein sequence ID" value="ADO57269"/>
        <property type="gene ID" value="PPSC2_15500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3311"/>
    <dbReference type="eggNOG" id="COG0613">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067347_1_0_9"/>
    <dbReference type="OMA" id="CTWGGAT"/>
    <dbReference type="OrthoDB" id="1309717at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004013">
        <property type="entry name" value="PHP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003141">
        <property type="entry name" value="Pol/His_phosphatase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02811">
        <property type="entry name" value="PHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00481">
        <property type="entry name" value="POLIIIAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="SSF89550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="POLIIIAc" evidence="2">
        <location>
            <begin position="10"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="31707" checksum="6B8DC8D5D04D8F13" modified="2011-01-11" version="1">MKEQNNLQRYDLHTHTQASDGMQSPADNVRWAKEKGLAGVAITDHDTVAGLEEALEEGRRIGMTVVPGVEISTRAGGKDIHILGYFMDYRNKMFLERLEKLRQARDTRNDLILSQLRSLGVEITLDEVVATMGRPLAPDESIGRPHMADTLVQKGYAKDMRDAFDRYLAEGAPGYVSVPRVEPAEAISWIREAGGVPVVAHPGLYGNDELVCSIIEAAKPVGLEVRHSDHDAEAERRYTAMALHYGLIATGGSDFHGARQGVIFHGDLGSRSVDGQVVEELRKVAVGQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8A7</accession>
    <name>E3E8A7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">PTS glucose transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">glcA</name>
        <name evidence="16" type="ORF">PPSC2_15645</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371886.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03295"/>
    <dbReference type="EnsemblBacteria" id="ADO57299">
        <property type="protein sequence ID" value="ADO57299"/>
        <property type="gene ID" value="PPSC2_15645"/>
    </dbReference>
    <dbReference type="GeneID" id="66576851"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3340"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_1_2_9"/>
    <dbReference type="OMA" id="IHHGFSY"/>
    <dbReference type="OrthoDB" id="2035550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036878">
        <property type="entry name" value="Glu_permease_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018113">
        <property type="entry name" value="PTrfase_EIIB_Cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001127">
        <property type="entry name" value="PTS_EIIA_1_perm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001996">
        <property type="entry name" value="PTS_IIB_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00358">
        <property type="entry name" value="PTS_EIIA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00367">
        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55604">
        <property type="entry name" value="SSF55604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00826">
        <property type="entry name" value="EIIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00830">
        <property type="entry name" value="PTBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51093">
        <property type="entry name" value="PTS_EIIA_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51098">
        <property type="entry name" value="PTS_EIIB_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01035">
        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 16" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="138"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="167"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="232"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="288"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="340"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="15">
        <location>
            <begin position="1"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="14">
        <location>
            <begin position="386"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-1" evidence="13">
        <location>
            <begin position="487"/>
            <end position="590"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO57299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="627" mass="68321" checksum="E5BF93F700B8AE0A" modified="2011-01-11" version="1">MNWLGSLQQLGRAVMLPTMVLPAAAILLSLGSLPWATWGFPMVSDMANAAGHGIFYFLPYLFAVGVALGMSNQAGQAGLAALAGMAIYDQVTLRFGNGLIQPATLIGIILGIISGLAYNRFKSIKLPEVLQFFGGTRFVLLLIGLFSAVFAGLMLIIAPLIQRGLEFIVGLESSLGGFGLLIYGILYRLLAAFGLHHLLNNIFWFQLGTYKTPSGNVVQGDLPRFFAGDPTAGYFMSGLFPIMMFAIPAIALAIIQEAREDLKPKVQKTFLTAALVCFFTGVSEQIEFAFLFAAPYLFLVHAVMSGLAMWLTFELDIHHGFSYSAGFIDYVLNFHLSHNAWLLIPVGVAYGLVYYVLFRWAIRRFRIPTPGREEGSVLEDWAGNIPYSAPLILEALGGKENIVQVEACITRLRLTVHNDRLIDTGAMKALGSAGLINLGGGNLQVVFGTYSELIREEIAKLMERDLPQILFNAPVHGKMLPIHEVPDKIFATKLVGDGVAFVPERGELVSPVYGTVMHLYPTMHALGISTREGLEVLLHIGIDTSQLKGNFTAMVEAGDTVEPGQLLIKFDLQALREQAPSLVTPMVITNPDRVKSWSFAPFKTVKKGQASVMSVVLHDRNVGGVET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8W1</accession>
    <name>E3E8W1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">GTP pyrophosphokinase</fullName>
            <ecNumber evidence="3">2.7.6.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">(p)ppGpp synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">ATP:GTP 3'-pyrophosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">ppGpp synthase I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">relA5</name>
        <name evidence="13" type="ORF">PPSC2_19140</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate</text>
            <dbReference type="Rhea" id="RHEA:22088"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:142410"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.7.6.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Purine metabolism; ppGpp biosynthesis; ppGpp from GTP: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the relA/spoT family.</text>
    </comment>
    <dbReference type="EC" id="2.7.6.5" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372634.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06340"/>
    <dbReference type="EnsemblBacteria" id="ADO58059">
        <property type="protein sequence ID" value="ADO58059"/>
        <property type="gene ID" value="PPSC2_19140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4101"/>
    <dbReference type="eggNOG" id="COG0317">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012300_3_0_9"/>
    <dbReference type="OMA" id="DWISSPK"/>
    <dbReference type="OrthoDB" id="204079at2"/>
    <dbReference type="UniPathway" id="UPA00908">
        <property type="reaction ID" value="UER00884"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008728">
        <property type="term" value="F:GTP diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015970">
        <property type="term" value="P:guanosine tetraphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
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        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="NT_Rel-Spo_like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="TGS_RSH"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="ACT_dom"/>
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    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
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        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
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        <property type="entry name" value="HD_domain"/>
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        <property type="entry name" value="RelA/Spo_fam"/>
    </dbReference>
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        <property type="entry name" value="RelA/SpoT_AH_RIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007685">
        <property type="entry name" value="RelA_SpoT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033655">
        <property type="entry name" value="TGS_RelA/SpoT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13291">
        <property type="entry name" value="ACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19296">
        <property type="entry name" value="DUF5913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04607">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00954">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00691">
        <property type="entry name" value="spoT_relA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="11">
        <location>
            <begin position="44"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="TGS" evidence="12">
        <location>
            <begin position="385"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="10">
        <location>
            <begin position="651"/>
            <end position="725"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="725" mass="83244" checksum="26C8AF6937224A34" modified="2011-01-11" version="1">MGIEQLLKKAGAYTREADLIRIRDAYDFAEQAHSGQTRKSGEPYILHPLAVADIVVNMQMDTISIIAALLHDVVEDTTVSLAQIREHFGDTCAMLVDGLTKLERIQFRSKEEQQNENYRKMFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIFCPVANRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQFIDNVIQRIREKLEEMGIQADLSGRPKHIYSVFKKMTTKNKQFNEIYDLLAIRIIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTVVGPNGEPTEVQIRTVDMHRTAEFGIAAHWAYKENNGANNTNFEDKITFFREILELQNEAKDASEFVESLKMDFFSDLVFVFTPKGEVIELPAGSVPLDFAFRIHTEVGNRTIGSKVNGRIVPLDYRLKTGDIVEIMTSKHSYGPSQDWLKIAQSSHARSKIKQWFKKEKREENVEKGRESLERELRKRDIEPSVWMSEDKLQDVAQKFSFNDSEDMLSAIGFGGITAAQVCTRLTEKLRKEQEEARLIELTTEVKEYKPQGERKKTPTNGVSVRGVDNLLVRFARCCNPVPGDDIIGYVTRGRGVSVHRTDCPNIPSGVGEDQARVIEVEWEEAAEVNYSVDIEITGHDRNGLLNEVLQAISENKTSFSAVTGRTDKNKMAMIHITILIRNTDHLHSVVERIKRVKDVYTVHRIMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Z1</accession>
    <name>E3E8Z1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yobV11</name>
        <name evidence="2" type="ORF">PPSC2_24645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12120"/>
    <dbReference type="EnsemblBacteria" id="ADO59198">
        <property type="protein sequence ID" value="ADO59198"/>
        <property type="gene ID" value="PPSC2_24645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5221"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_1_2_9"/>
    <dbReference type="OMA" id="IQGNFGP"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="2"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="315" mass="36155" checksum="A187E7DD56C7CC37" modified="2011-01-11" version="1">MMNIGILGTGFGSYHASLLNNHPKVNRLIVFGRNETKLQKLKEELNVEVTQNIEDILLDPDVGIVDLCLPSHLHRSHAIDALKHGKHVFCETPVCFHLEDALLMQQAEKQYGKKILVNQFIKFDPAYTYLYEAYRQQKYGKLISLSLKRETPPLWGDLGLSSIPTQFMIHELDLFTWLWGPCDPYTVWGTEVVHPEQAQVRAYYQHRDAFTEVNASSHMPKSYPFTVAYEAYFEKAKLVFHESDENDPLPTALFEYTASGQQKINLESANPYEKSWDHALECFGGHAECLIPLESAVQALEMAIEIKNWLEQARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E919</accession>
    <name>E3E919_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Malate permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_24760</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373759.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12255"/>
    <dbReference type="EnsemblBacteria" id="ADO59226">
        <property type="protein sequence ID" value="ADO59226"/>
        <property type="gene ID" value="PPSC2_24760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5248"/>
    <dbReference type="eggNOG" id="COG0679">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056175_1_0_9"/>
    <dbReference type="OMA" id="ITTQGMW"/>
    <dbReference type="OrthoDB" id="2033473at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="16"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="136"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="264"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="290"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="323"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="351" mass="38651" checksum="A46BE4A5FF4C964B" modified="2011-01-11" version="1">MSLLEMITATLTDNSIVSSIASTVFIILLGFFCRKKGIFTAAVGKMLSKVVLTVALPALAFNSFMQDINPTILKQGMNVLIWGILIYIILIFISKPFFLSYNKDKQDVLRVLTIFGSTTFFGIPIVGAIYGPTGVMYSSIFNIGYRIFLYSYGYIKMSGLKMELKNLKTMFLNPIVIATFIGLFVWLFQGYLPQMSVATEDGTIQQFAFLRIDQTAVWLFKPMTYLAGLASPLAWLSIGSTLGEISFKSAATDKTSWYYSLVKVWLVPIVNIVLLALLTISHILSVDTVALSTIVIMMATPTATVAAAYAISFDKEAVLTSNASLLSTITSVVMIPVWIITLNVIDKIGIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E930</accession>
    <name>E3E930_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ytlI3</name>
        <name evidence="3" type="ORF">PPSC2_24805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373770.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12300"/>
    <dbReference type="EnsemblBacteria" id="ADO59237">
        <property type="protein sequence ID" value="ADO59237"/>
        <property type="gene ID" value="PPSC2_24805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5258"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="PWIFGGS"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="32954" checksum="35923BF84537AD05" modified="2011-01-11" version="1">MDIKALKTFQMIVNYGSFMRAAEALNYAQSTVTMQIQKLESDLGVQLIERGKKIKLTEAGRMFYEQSLPIVKDMEQLQENMENLQKGTAGDIRIGVTEPTASYRLPEILKRFLNHYPHIRVSVEFGNTPTLSERILQGDVDIALCSAPDLGTELYFEPLFKENFVVLMPEHHPLAEKECIGPADLQGHRLLITSSICPYRRKLEMVMKEHGITTLDTMEIGSMTALKSYVECELGIALVPQILVHPVPAGTAVRQLSGSLIDMTFGLLCKANEAPLKLASSRLYSVLKQELGQLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E974</accession>
    <name>E3E974_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3-hydroxyacyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="3">1.1.1.35</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pksL</name>
        <name evidence="10" type="ORF">PPSC2_15870</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Antibiotic biosynthesis; bacillaene biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.35" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371933.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03565"/>
    <dbReference type="EnsemblBacteria" id="ADO57347">
        <property type="protein sequence ID" value="ADO57347"/>
        <property type="gene ID" value="PPSC2_15870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3388"/>
    <dbReference type="eggNOG" id="COG0236">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2227">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3321">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4221">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_223515_0_0_9"/>
    <dbReference type="OMA" id="ITGLEWI"/>
    <dbReference type="OrthoDB" id="1123553at2"/>
    <dbReference type="UniPathway" id="UPA01003"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003857">
        <property type="term" value="F:3-hydroxyacyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.129.110">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018201">
        <property type="entry name" value="Ketoacyl_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013217">
        <property type="entry name" value="Methyltransf_12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032821">
        <property type="entry name" value="PKS_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020807">
        <property type="entry name" value="PKS_dehydratase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042104">
        <property type="entry name" value="PKS_dehydratase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013968">
        <property type="entry name" value="PKS_KR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16197">
        <property type="entry name" value="KAsynt_C_assoc"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08659">
        <property type="entry name" value="KR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08242">
        <property type="entry name" value="Methyltransf_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14765">
        <property type="entry name" value="PS-DH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00826">
        <property type="entry name" value="PKS_DH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00606">
        <property type="entry name" value="B_KETOACYL_SYNTHASE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="1711"/>
            <end position="1784"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="3685"/>
            <end position="3758"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="1745"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="3719"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="4465" mass="493464" checksum="E10E3BBD0B021C04" modified="2011-01-11" version="1">[encoded data, 4465 characters]</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9F0</accession>
    <name>E3E9F0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">NTP pyrophosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">apfA</name>
        <name evidence="4" type="ORF">PPSC2_16950</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the Nudix hydrolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372163.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04285"/>
    <dbReference type="EnsemblBacteria" id="ADO57581">
        <property type="protein sequence ID" value="ADO57581"/>
        <property type="gene ID" value="PPSC2_16950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3620"/>
    <dbReference type="eggNOG" id="COG1051">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037162_14_4_9"/>
    <dbReference type="OMA" id="NDPDHEA"/>
    <dbReference type="OrthoDB" id="1308416at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="3">
        <location>
            <begin position="4"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="16358" checksum="A953748720319685" modified="2011-01-11" version="1">MAAKKEISAGGVVFRKQEEQLEIQLITDRYGKISLAKGKMEPGETIEQTALREIREETGLNGRIIQHVDMIAYTYQHPEYGEVDKEVHYYLVEALDGNLQAQIEEIKGVAWHTPEEAWRLQRQGGYDNNDVILSKALSMLGINV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9N4</accession>
    <name>E3E9N4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Methionine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sfbA</name>
        <name evidence="6" type="ORF">PPSC2_18095</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NlpA lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372404.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05420"/>
    <dbReference type="EnsemblBacteria" id="ADO57824">
        <property type="protein sequence ID" value="ADO57824"/>
        <property type="gene ID" value="PPSC2_18095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3866"/>
    <dbReference type="eggNOG" id="COG1464">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067080_0_1_9"/>
    <dbReference type="OMA" id="TAPMGLY"/>
    <dbReference type="OrthoDB" id="1230456at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004872">
        <property type="entry name" value="Lipoprotein_NlpA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30429">
        <property type="entry name" value="PTHR30429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03180">
        <property type="entry name" value="Lipoprotein_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168965" evidence="5">
        <location>
            <begin position="32"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="30747" checksum="41D65BB1F45E716B" modified="2011-01-11" version="1">MKKQWISFILLLGVVVLFISGCGSKNTSGGAAGEEKKTLHISFNPGPYSDQFKNGVAPYLEKKGYKITYKEFTDGVQPNVAVANGDIDANVFQHSLYLDSMNKRENIDLVGAVQVPTPPMGLYSSKHTSLDEISAGAQINLPNEPVNMLRALNILKEVGWITLKDNIDPLQTSVNDITSNPHHLQFVATDPAQGPRVLEDVDFAAIQGNFAVSNGMKLTSALKLENMTDPFTNVVAVDSKNKDKPFVKDIIEGYHSDEFQQYIKSNPAYEGYKLPSYFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9X2</accession>
    <name>E3E9X2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Folylpolyglutamate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">folC</name>
        <name evidence="8" type="ORF">PPSC2_19430</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the folylpolyglutamate synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372678.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06630"/>
    <dbReference type="EnsemblBacteria" id="ADO58105">
        <property type="protein sequence ID" value="ADO58105"/>
        <property type="gene ID" value="PPSC2_19430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4145"/>
    <dbReference type="eggNOG" id="COG0285">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015869_1_2_9"/>
    <dbReference type="OMA" id="YFEMGTL"/>
    <dbReference type="OrthoDB" id="1232874at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004326">
        <property type="term" value="F:tetrahydrofolylpolyglutamate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001645">
        <property type="entry name" value="Folylpolyglutamate_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018109">
        <property type="entry name" value="Folylpolyglutamate_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11136">
        <property type="entry name" value="PTHR11136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001563">
        <property type="entry name" value="Folylpolyglu_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01499">
        <property type="entry name" value="folC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01011">
        <property type="entry name" value="FOLYLPOLYGLU_SYNT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase_M" evidence="7">
        <location>
            <begin position="57"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="6">
        <location>
            <begin position="309"/>
            <end position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR001563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="458" mass="50523" checksum="E35C38E4FB08B8F2" modified="2011-01-11" version="1">MSDTIRGGDIAPLQSYDEAVEWINGLIPFGIRPGLERIEQLMSRLGDPQRHLKFIHIAGTNGKGSTCAFLTSVLLKCGYDVGTFTSPYITRFTNRFQFNGTDIPDETLVSLANRLYPLVKEIADSELGSPTMFEVSTALAILYYATVAFPDVVVWETGLGGRMDVTNIVSPIVSVITNVGYDHTDILGDTLEQIAREKAGIIKPGVPVVSCVSQPEAIQVIRKTAAKQGATLYLAGEQFTYERLNGNETGQTFSFAGPFRHMEIDITLLGEHQCSNAAGAMMALEVLRQYMAFVLDDADLLEGFRQAAWAGRLEQVSTSPRIVLDGAHNPEGAQTLAKSLPQVYSYKKLVLMMGMLSNKHHEAYLQHILPLVDTLILTEPDFRRKMNAADLAHLVEKLRPSYAKTDLKIIVEGDWKKALSLFQSHTEAEDLGVVSGTLYLIADVRATLMYQTDSEKGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="79" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Y2</accession>
    <name>E3E9Y2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8 13">Glutamyl-tRNA reductase</fullName>
            <shortName evidence="8">GluTR</shortName>
            <ecNumber evidence="4 8 13">1.2.1.70</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 18" type="primary">hemA</name>
        <name evidence="18" type="ORF">PPSC2_19480</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 19">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8 13">
            <text>(S)-4-amino-5-oxopentanoate + NADP(+) + tRNA(Glu) = H(+) + L-glutamyl-tRNA(Glu) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:12344"/>
            <dbReference type="Rhea" id="RHEA-COMP:9663"/>
            <dbReference type="Rhea" id="RHEA-COMP:9680"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57501"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="EC" id="1.2.1.70"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8 13">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; 5-aminolevulinate from L-glutamyl-tRNA(Glu): step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="8">During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8 13">Belongs to the glutamyl-tRNA reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.70" evidence="4 8 13"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="RefSeq" id="WP_013372688.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06680"/>
    <dbReference type="EnsemblBacteria" id="ADO58115">
        <property type="protein sequence ID" value="ADO58115"/>
        <property type="gene ID" value="PPSC2_19480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4155"/>
    <dbReference type="eggNOG" id="COG0373">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035113_2_2_9"/>
    <dbReference type="OMA" id="FAFKCAA"/>
    <dbReference type="OrthoDB" id="1358620at2"/>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00316"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008883">
        <property type="term" value="F:glutamyl-tRNA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="term" value="F:NADP binding"/>
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        <property type="project" value="InterPro"/>
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    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
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        <property type="project" value="UniProtKB-UniPathway"/>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00087">
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        <property type="match status" value="1"/>
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        <property type="entry name" value="4pyrrol_synth_GluRdtase"/>
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    <dbReference type="InterPro" id="IPR015896">
        <property type="entry name" value="4pyrrol_synth_GluRdtase_dimer"/>
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    <dbReference type="InterPro" id="IPR015895">
        <property type="entry name" value="4pyrrol_synth_GluRdtase_N"/>
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    <dbReference type="InterPro" id="IPR018214">
        <property type="entry name" value="GluRdtase_CS"/>
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    <dbReference type="InterPro" id="IPR036453">
        <property type="entry name" value="GluRdtase_dimer_dom_sf"/>
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        <property type="entry name" value="GluRdtase_N_sf"/>
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    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
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    <dbReference type="InterPro" id="IPR006151">
        <property type="entry name" value="Shikm_DH/Glu-tRNA_Rdtase"/>
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    <dbReference type="Pfam" id="PF00745">
        <property type="entry name" value="GlutR_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05201">
        <property type="entry name" value="GlutR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01488">
        <property type="entry name" value="Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000445">
        <property type="entry name" value="4pyrrol_synth_GluRdtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69075">
        <property type="entry name" value="SSF69075"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69742">
        <property type="entry name" value="SSF69742"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01035">
        <property type="entry name" value="hemA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00747">
        <property type="entry name" value="GLUTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 11" id="KW-0521">NADP</keyword>
    <keyword evidence="6 8 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7 8 13" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GlutR_N" evidence="17">
        <location>
            <begin position="6"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="domain" description="Shikimate_DH" evidence="16">
        <location>
            <begin position="171"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="GlutR_dimer" evidence="15">
        <location>
            <begin position="320"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="49"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="114"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="442"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8 9">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="109"/>
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        <ligand>
            <name>substrate</name>
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        <location>
            <position position="120"/>
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        <ligand>
            <name>substrate</name>
        </ligand>
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    <feature type="binding site" evidence="8 11">
        <location>
            <begin position="189"/>
            <end position="194"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for activity" evidence="8 12">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005059"/>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00012970"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
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    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
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    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00087"/>
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    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000445-1"/>
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    </evidence>
    <evidence type="ECO:0000256" key="10">
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            <dbReference type="PIRSR" id="PIRSR000445-2"/>
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            <dbReference type="PIRSR" id="PIRSR000445-3"/>
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            <dbReference type="PIRSR" id="PIRSR000445-4"/>
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        <source>
            <dbReference type="RuleBase" id="RU000584"/>
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    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
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    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00745"/>
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    </evidence>
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            <dbReference type="Pfam" id="PF01488"/>
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            <dbReference type="Pfam" id="PF05201"/>
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    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ADO58115.1"/>
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    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="464" mass="52259" checksum="6F33BF4AFA8B9BCF" modified="2011-01-11" version="1">MHIVVVGLNYRTAPVEVRERFTFAEQDLPKALEQLKLTKSVLEGVVVATCNRTEIYVVVDRLHMCGYFIRSFMEQWFGIPRDQFTQHLYIYEDEQAIRHLFRVTCGLDSMVIGETQILGQVKNAFLQAQSQKITATWFNMLFKQAVTLGKRAHSETSIGESAVSVSYAAVELGKRIFGMFTDKKVLILGAGKMSELTVKHLYSGGAAEVIVANRTLSRAEDLASKFNGTPVTMEEGMNRLADVDIVISSTGAQGYILDRNRVEASMKRRQSRPLFMIDIAVPRDLDPAIGELQNVFLYDIDDLEGIVESNLEMRRTEAAKIEHMIEDELSEFYQWLKTMGVRPVIRALQEKAESIHQDTLESLYNKLPELDERQRKVISRLTKSMLNQMMHDPINRVKELAVQKQGNEALDMFSHIFALEDRLEDAAQKVDKSDASALIKPEAGVHGKTGQAQALPASFAPASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Y9</accession>
    <name>E3E9Y9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP-dependent Clp protease ATP-binding subunit ClpX</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">clpX</name>
        <name evidence="9" type="ORF">PPSC2_19515</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the ClpX chaperone family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06715"/>
    <dbReference type="EnsemblBacteria" id="ADO58122">
        <property type="protein sequence ID" value="ADO58122"/>
        <property type="gene ID" value="PPSC2_19515"/>
    </dbReference>
    <dbReference type="GeneID" id="66576165"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4162"/>
    <dbReference type="eggNOG" id="COG1219">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014218_8_2_9"/>
    <dbReference type="OMA" id="HYKRVQA"/>
    <dbReference type="OrthoDB" id="718259at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00175">
        <property type="entry name" value="ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004487">
        <property type="entry name" value="Clp_protease_ATP-bd_su_ClpX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046425">
        <property type="entry name" value="ClpX_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010603">
        <property type="entry name" value="Znf_CppX_C4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038366">
        <property type="entry name" value="Znf_CppX_C4_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06689">
        <property type="entry name" value="zf-C4_ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00994">
        <property type="entry name" value="zf-C4_ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00382">
        <property type="entry name" value="clpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51902">
        <property type="entry name" value="CLPX_ZB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6 7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ClpX-type ZB" evidence="8">
        <location>
            <begin position="1"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="117"/>
            <end position="124"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="418" mass="46536" checksum="0FD12BFF122E49F4" modified="2011-01-11" version="1">MFKFNDEKGQLKCSFCGKSQDQVRKLVAGPGVYICDECIELCTEIVEEELGHEEEVDLKDIPKPMQIREILDQYVIGQDQAKKSLSVAVYNHYKRINTQNKIDDVELQKSNILMLGPTGSGKTLLAQTMAKILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGLEQMIKRRIGKKVIGFNATSEQKDLKPGEYTSMVLPEDLLKFGLIPEFVGRLPVISTLEPLDEKTLVRILSEPKNALTKQYQKMLELDNVQLEFKQDALEAIAREAIKRNTGARGLRAIIEGIMLDVMYEVPSRDDVTTCVINEQVVKDKIAPELGGTDKDKKQEESA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA53</accession>
    <name>E3EA53_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">4-hydroxybenzoate decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372915.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07780"/>
    <dbReference type="EnsemblBacteria" id="ADO58345">
        <property type="protein sequence ID" value="ADO58345"/>
        <property type="gene ID" value="PPSC2_20525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4378"/>
    <dbReference type="eggNOG" id="COG0043">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023348_4_1_9"/>
    <dbReference type="OMA" id="SYQQFWG"/>
    <dbReference type="OrthoDB" id="1012819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002830">
        <property type="entry name" value="UbiD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30108">
        <property type="entry name" value="PTHR30108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01977">
        <property type="entry name" value="UbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00148">
        <property type="entry name" value="TIGR00148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="588" mass="66023" checksum="43807764D793D1F4" modified="2011-01-11" version="1">MIYQNLRQFIEALRKENDLKIIEAPVDPYLELAEIHRRVIEEEGPALLFTNVKGTPFPVASNLFGTNRRVDMAFGPRPEQLMDAIVGATKTLLPPTPKALWNERGLIKDMLKVGLKTVSHNEAPVLGVRRTDAPLAPLPRVTSWHEDGGPFITLPLVYTEKPGQSKDHNLGMYRIQIYDDHTTGIHWQIHKGGGFHYHEAELRNEPLPTTIIIGGPPALIASAIAPAPENLPELLLASLIMGGKLPMTEDPLGGHRIPAEAEFAISGYVPPHERRPEGPFGDHFGYYSLQHDFPVFHVKHMHHRKDAIYPATIVGKPRQEDYYLGEFLQRLLSPAYPLVMPSVKSLWAYAETGVHALAAAVVRESYSREALVSGFTILGQGQLSLTKFLMLTDRVIDLSDFNLLLETILERFNPARDLFIFNHTSHDTLDYTGRKLNHGSKAILMGVGEPVRELPRVYEGGDLPGIRDIEPYCGGCLVVSGSSFEQEPELAARVLERLAAGEQEWPLVFIVDDAKEVVRSQASFLWTVFTRFNPATDMYAVSEVRLHHLNYKLPIVVDARMKPGYPDEVLPREDIVRLVDQRWTSYFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA89</accession>
    <name>E3EA89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugpA7</name>
        <name evidence="7" type="ORF">PPSC2_20695</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372950.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07940"/>
    <dbReference type="EnsemblBacteria" id="ADO58381">
        <property type="protein sequence ID" value="ADO58381"/>
        <property type="gene ID" value="PPSC2_20695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4414"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_2_9"/>
    <dbReference type="OMA" id="GPLWFND"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="205"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="264"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="74"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33900" checksum="7371219A7F7703F3" modified="2011-01-11" version="1">MQSLSSIRKKENGLGWLFAAPAILGFVIFVLGPMIASLWFSLTDYKVASQARFIGLDNYVHLFDGTDQFFYKSLAVTFYYVFLSVPLQIIVAFFLAILLNQKVKGLAFFRTVFYLPTIVPLIASSMIWMWLFDPDLGLLNVVLRALHLPESQWIYSEGSVVPTLVLMSLWTVGGTMIIFLAGLQDIPRHYYEAIEIDGGSALHKLIYITIPLTSPTIFFNTIMGFIGGFQVFVQPYVMTQGGPNNSSLFYTFYLFREAFTFSNMGYACAIAWVLFIVVLTFTAFLFKTARKWVYYEGGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAG7</accession>
    <name>E3EAG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Response regulator of the lytr/algr family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rr02</name>
        <name evidence="6" type="ORF">PPSC2_21735</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373152.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4638"/>
    <dbReference type="EnsemblBacteria" id="ADO58585">
        <property type="protein sequence ID" value="ADO58585"/>
        <property type="gene ID" value="PPSC2_21735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4625"/>
    <dbReference type="eggNOG" id="COG3279">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_14_2_9"/>
    <dbReference type="OMA" id="FRANRKH"/>
    <dbReference type="OrthoDB" id="1958442at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007492">
        <property type="entry name" value="LytTR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04397">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00850">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50930">
        <property type="entry name" value="HTH_LYTTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="3"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="HTH LytTR-type" evidence="5">
        <location>
            <begin position="130"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="3">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="29016" checksum="3D083CB660E71B27" modified="2011-01-11" version="1">MLNIALCDDTNVELARVERFTLEYPFTKVEVDTFGSGQKLLQYVAKNKTEYNIYLLDIEMADMDGISLAKKVREFDNKAVIIFVTNYDEYMPDVFKVQTFDYILKPVNKETLFEVLQRADHYLHSSHSYFEFSYERNKLIVNEDEIMYFEKSGRAAYIYTETKEYKCNQTTSQILAQLDPMAFTQVHASYIINLKYVVGIKCENIMMKRIVNGEIQDTYLELPISRKYKKDFKQKMMNYMRKRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAL4</accession>
    <name>E3EAL4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Teichoic acid ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rfbB</name>
        <name evidence="6" type="ORF">PPSC2_22695</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373311.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4830"/>
    <dbReference type="EnsemblBacteria" id="ADO58772">
        <property type="protein sequence ID" value="ADO58772"/>
        <property type="gene ID" value="PPSC2_22695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4806"/>
    <dbReference type="eggNOG" id="COG1134">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_101_1_9"/>
    <dbReference type="OMA" id="HATEQVK"/>
    <dbReference type="OrthoDB" id="887953at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03220">
        <property type="entry name" value="ABC_KpsT_Wzt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10147">
        <property type="entry name" value="Wzt_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015860">
        <property type="entry name" value="ABC_transpr_TagH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029439">
        <property type="entry name" value="Wzt_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14524">
        <property type="entry name" value="Wzt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="59"/>
            <end position="66"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="45776" checksum="08221182733EB0C8" modified="2011-01-11" version="1">MGTIINIDNVVKTYKLYDKPLDRLKEAVSPFKKRYHEEYNALNGISFSVEKGDAIGILGKNGSGKSTLLKMITGVLSPSTGNIKVDGKISAILELGAGFNPEYSGRENIYLNGLMMGYSRDQMAEKLDDIIAFADIGSFIEQPVKVYSSGMFARLAFAVSINVDPDILIVDEALAVGDIRFQTKCIDKMKELKSKGTTILFVSHATEQVKRFCNKAVWIKEGKVEAIGEASEVVDEYEDFMKNDVVTLDNKSIVLQNHYNKVEVDPDFVVPDNPDVLAWISSVKINKEKFKTFDALEVSVEYEIYRDTIPDLLLGVAIYTPKRDYIFGPNTHLENVEINRTLGRHKMKYVIPNIPLLGGTYCVDVGLFNNEGLVCLHYKENICSFSITNKYISEGLIYMKHRWEVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAY8</accession>
    <name>E3EAY8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373587.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5114"/>
    <dbReference type="EnsemblBacteria" id="ADO59052">
        <property type="protein sequence ID" value="ADO59052"/>
        <property type="gene ID" value="PPSC2_23985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5075"/>
    <dbReference type="eggNOG" id="COG1357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1359288_0_0_9"/>
    <dbReference type="OMA" id="YDAGWAF"/>
    <dbReference type="OrthoDB" id="1257476at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="201" mass="23595" checksum="689419F938803FC8" modified="2011-01-11" version="1">MNRREALDHFHKTYAEDMLHEKLSQVAVLYEHRKEELIFSFIQSFQSICLQANSAEADKTTIGYITYSMRRTYLRERIYNYVIEVYGANWYFDPLPYRGTYDAGWAFGLLAELEDELSQLRKPYMNKVIQPDVERFVLQAAWEFHQYILKLAKDAMQQAVQLPEFEALKCENDLEIRIGEYKGISEAVYSTAYGVLHDSTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB59</accession>
    <name>E3EB59_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Unc45A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">unc45A</name>
        <name evidence="3" type="ORF">PPSC2_25260</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59339.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324926.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5403"/>
    <dbReference type="EnsemblBacteria" id="ADO59339">
        <property type="protein sequence ID" value="ADO59339"/>
        <property type="gene ID" value="PPSC2_25260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5356"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_123393_0_0_9"/>
    <dbReference type="OrthoDB" id="1414132at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041617">
        <property type="entry name" value="TPR_MalT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17874">
        <property type="entry name" value="TPR_MalT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="domain" description="TPR_MalT" evidence="2">
        <location>
            <begin position="5"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="11"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59339.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="16066" checksum="1BA65C993ED9FC3B" modified="2015-05-27" version="2">MQLSDSTYSAIRALCKQGDDLVKAGDLDAAKQNYIAALRLLPENHQEWEAATWIYVAIGDVHYRMKNYDKAFKCFFNAVQCPKGLGNPYIHLRLGQLYYEQENFEKAVDELTRAYMGAGIGIFLEDDPKYLEFLETNIEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBA6</accession>
    <name>E3EBA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Iron ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sufC</name>
        <name evidence="6" type="ORF">PPSC2_20975</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily. Ycf16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373007.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08205"/>
    <dbReference type="EnsemblBacteria" id="ADO58438">
        <property type="protein sequence ID" value="ADO58438"/>
        <property type="gene ID" value="PPSC2_20975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4473"/>
    <dbReference type="eggNOG" id="COG0396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_48_1_9"/>
    <dbReference type="OMA" id="VHIMEAG"/>
    <dbReference type="OrthoDB" id="1214676at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03217">
        <property type="entry name" value="ABC_FeS_Assembly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010230">
        <property type="entry name" value="FeS-cluster_ATPase_SufC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43204">
        <property type="entry name" value="PTHR43204"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01978">
        <property type="entry name" value="sufC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="28981" checksum="4EE39C5034956B40" modified="2011-01-11" version="1">MTTLKIEKLRSKIEGKEILKGLTLEIHGGEIHAIMGPNGTGKSTLASALMGHPKYEVTGGKVTLDNEDLLEMEVDERAQAGLFLAMQYPSEIAGVTNSDFLRTAINARREEGDEISLIRFIREMESKMKGLEMNPEFMHRYLNEGFSGGEKKRNEILQMMLLEPKFVILDEVDSGLDIDALRIVANGVNEMRSPDRGFLIITHYQRLLNYITPDFVHVMMQGRIVKSGGPELAHRLEAEGYDWVKEELGITDETVSEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBG2</accession>
    <name>E3EBG2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfiF7</name>
        <name evidence="5" type="ORF">PPSC2_21985</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373202.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09135"/>
    <dbReference type="EnsemblBacteria" id="ADO58636">
        <property type="protein sequence ID" value="ADO58636"/>
        <property type="gene ID" value="PPSC2_21985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4676"/>
    <dbReference type="eggNOG" id="COG2169">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="OMA" id="RTVGEWI"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="179"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="32830" checksum="273F0C69CAFB0535" modified="2011-01-11" version="1">MNEMKEDKYIIGEQQFSIHHIYRTGFTVMPRPHVHENYELYFLLQGERIYFMNGKVYTARKGDLIFILPHDLHSTASTQLEETERILIHFSPTFLPPQDRDILDLPPYQQSALLRLPAREQVEVERLFLQMNSECRNKQPLHDRCVQHLLLEMLILVHRSEAAERSELISSHPMHQKITEISSFIQDHFNEPLTLEQVAACFFISPAYLSRIFLKLTGFHFSEYIRVVRVRAAQTRLRTTKDKIQSIAEDVGFGHASHFNKIFKKITGLSPLQYRKQVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBH7</accession>
    <name>E3EBH7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">amyE</name>
        <name evidence="5" type="ORF">PPSC2_22045</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373217.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09195"/>
    <dbReference type="EnsemblBacteria" id="ADO58651">
        <property type="protein sequence ID" value="ADO58651"/>
        <property type="gene ID" value="PPSC2_22045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4691"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_12_3_9"/>
    <dbReference type="OMA" id="WSLGAHY"/>
    <dbReference type="OrthoDB" id="480174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006061">
        <property type="entry name" value="SBP_1_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01037">
        <property type="entry name" value="SBP_BACTERIAL_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168734" evidence="4">
        <location>
            <begin position="33"/>
            <end position="441"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="441" mass="47903" checksum="C841F08F2E15E44B" modified="2011-01-11" version="1">MRKFKRVQWMVMLLLLVMVVSACGGSGGGSNSASGGGSADAGNVKITLLNSKGEILSQLEDAAKAFQKDNPGITVEIQPVPTGGSPFERASALYASGNPPTMTMLDTGDVEKFKDRILDLSGEKWNKDIVENATTATTVDGKNYAFPLAVEGYGFIYNKAVVDKAVGGSFDPTTIKTRNDLEKLFQQIEASGKKALVISPMDWSLGAHYLPLAYAGQNKDMAEVDKFIASLKAGQANLATNPVFNGLMDTFDVMMKYNIDQASPLAGAYERGPELLGKGEVGIWFMGNWAWPQISGFDTANKEYGFLPVPISNNADDYGNQEISSAVSKRIVIDKEKSTPEQQEAAKKFLNWIVYDAKGQDFLVNKANIIPAFKNITLPAADPLGKSIQDYIAKGKSEQSMSLLPADHWSKLGSSMQKYLAKQGDRATLAKEIEDYWKTVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBL8</accession>
    <name>E3EBL8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Flagellar secretion chaperone FliS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fliS</name>
        <name evidence="7" type="ORF">PPSC2_22975</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
            <location evidence="1 6">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the FliS family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373374.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4896"/>
    <dbReference type="EnsemblBacteria" id="ADO58836">
        <property type="protein sequence ID" value="ADO58836"/>
        <property type="gene ID" value="PPSC2_22975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4865"/>
    <dbReference type="eggNOG" id="COG1516">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_080373_3_2_9"/>
    <dbReference type="OMA" id="EFRDTWK"/>
    <dbReference type="OrthoDB" id="1730695at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16098">
        <property type="entry name" value="FliS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003713">
        <property type="entry name" value="FliS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036584">
        <property type="entry name" value="FliS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34773">
        <property type="entry name" value="PTHR34773"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02561">
        <property type="entry name" value="FliS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039090">
        <property type="entry name" value="Flis"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101116">
        <property type="entry name" value="SSF101116"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00208">
        <property type="entry name" value="fliS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="7" id="KW-0966">Cell projection</keyword>
    <keyword evidence="5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="7" id="KW-0969">Cilium</keyword>
    <keyword evidence="3 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR039090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="134" mass="14775" checksum="D91F814D844FF56F" modified="2011-01-11" version="1">MITSPYEKYRQSSVQTSTPSQLVVMLYDGAIRFVKAGLVALDSKDYQKVNLNLGKAQTIISELMSTLDHSYDISKSLFALYEYMNYLLIQANIKKSADPANEALGYLTELRETWVQASKLTAGAADTAIGSNHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM8</accession>
    <name>E3EBM8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Family 2 glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">Ogt</name>
        <name evidence="3" type="ORF">PPSC2_23025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373384.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4906"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58846">
        <property type="protein sequence ID" value="ADO58846"/>
        <property type="gene ID" value="PPSC2_23025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4877"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0463">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023736_1_0_9"/>
    <dbReference type="OMA" id="YEYSTEM"/>
    <dbReference type="OrthoDB" id="1379602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13176">
        <property type="entry name" value="TPR_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="6"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="194"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="629" mass="72681" checksum="2C0AF4F532EDB6FA" modified="2011-01-11" version="1">MNKTISLCMIVKNEEKVLDRCLSSVVNKVDEIIILDTGSTDSTMEMARKYTEKVYSYQWDDDFAAARNHSLEYAKSDYILVLDADEYLESDADLKKVVESGNDYYLTRIRNLLSFGWAHTHTAIRLFVNKPQLKYKNRLHEHLDTMNENYEYSTEMAEFVILHTGYMNETVAEKDKLSRNLPIMLREVAENPNGYNLFNTGNVYYSLGNYKKAIEFYQRSYPLSKDKSYAPELLTKIATCLSYLGKHEEGLRVLEDAVEIFPNTVDLRYAQGKIYFEADYLKDAELAFRKCLIMGDKGITVTEGAGGYGAHYYLSLLYYKKGELAKSYDEIIKVIQEKKLFVPGLNHYFDVILKSNIPFNDVKFNINDIYNVSNVEELRWLMESMYSLRHPLLNEYLITYNLTVEAKIKAVALLFDKKYEESKQYWGKVPLDQENALDVVLLAIILQDEGLYNSAQMILNLSVNERKMFKSILFGGNLTKLSMTTNLEGMILKVISHLIVLQEFEIFESISLVLITSESDRIKQKLGEVLTSYGFHEVAIDILVKCFEKKPNSSSLVSLLGDICLKSGYLQDAQLFYNKLLEIKPDYSSYERCYDLYEVSENVQGMRVIKEEIKRKFPLATWVKGFSMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW3</accession>
    <name>E3EBW3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA polymerase sigma factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_24135</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373622.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11640"/>
    <dbReference type="EnsemblBacteria" id="ADO59087">
        <property type="protein sequence ID" value="ADO59087"/>
        <property type="gene ID" value="PPSC2_24135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5110"/>
    <dbReference type="eggNOG" id="ENOG5033SKG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_485587_0_0_9"/>
    <dbReference type="OMA" id="INQTHIG"/>
    <dbReference type="OrthoDB" id="338377at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025436">
        <property type="entry name" value="DUF4179"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13786">
        <property type="entry name" value="DUF4179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4179" evidence="2">
        <location>
            <begin position="51"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="561" mass="63560" checksum="1048F7F7A0764AB6" modified="2011-01-11" version="1">MNNIEKALKHKLNDDSKMAYPDFDEMWNRMEQTGHTAPTLTDTFDSFTPHRHRNWRKIAIAASLSALLVAVPVYAAIHYNWDNLLHGRSGIETALAQNLGQPLEQSVTRDGIKLTLHTAIVDENRTVILYSLEVGKRADNEFWNVKGVSLKNAAGKSSEGEYSFQQWDEKNQRYNGYFESDWTPQQETENARLAVDHIELTSVQELDLPLDIKSPQTQTFKLDRNGLQNMKVQVFEQGKDKLMLSSAITFDSSIPKEWDNPQIIAYKDGKPVNPQSGGTFGTPGENGEYTAQQYFTKEDIPEGQTTFKLQYAQTEKSIHEPLNFDLQLSKKKMESGTIKSVLNTPLENGNPNFMLEQMIVTPTQIRVTIRSKEKFAMLPYQKYFLSVNGTTLEGSRWSSPDQEHDLNTIRFERPANLVITKDTPITFTGKYKVTTHSDDKTPQRLADISEQKQTLTTQIGGYPVKWTYYKQGSDLFVETESEDTHFGGINQTHIGLGEERIIGKPITANFAGDGNNKAVDVYKNFKGKEASIYMFYYTTDDPEAETTVPLQPLTSNSKVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX2</accession>
    <name>E3EBX2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Major facilitator transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ydhL</name>
        <name evidence="9" type="ORF">PPSC2_24175</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373631.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5158"/>
    <dbReference type="EnsemblBacteria" id="ADO59096">
        <property type="protein sequence ID" value="ADO59096"/>
        <property type="gene ID" value="PPSC2_24175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5119"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_61_5_9"/>
    <dbReference type="OMA" id="LLPMMTF"/>
    <dbReference type="OrthoDB" id="1384345at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="95"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="128"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="156"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="199"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="234"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="267"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="290"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="328"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="354"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="4"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="392" mass="41892" checksum="1F3F9B565F3F278B" modified="2011-01-11" version="1">MNFKVVILTIATFTVGLVELIIGGVLPQIAQDLNVSVSTAGQLIMIYALVYAIAGPTLLALTAKIERKRLYLWSMFIFILGSLLAFWSPNYAVLFISRIVTAASGSLIVTLSLTIAVKVVSKAYQARVLGVISMGVSSSIVLGIPAGVLIGNAFGWRVLFLIIALLTVVSMIIMNLFMERIPTEHVVPMREQLKSLKNVKVISAHLVTTLTLAGHYTLYAYFTPFLENLMGLNASWVSVAYFVFGLAAVSGGFIGGSLADRFGTAKSILIVVGVFIAVMFLLPFSIHSMYVFVPLLIIWGILSWALSPPMQSYLIENAPESGSIQQSFNFSALQVGIALGSALGGVVIDNSTSVATNAWVGGAFVIVAFVCGVFSITRAGTSQTVRGHHSVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECU8</accession>
    <name>E3ECU8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkaline phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dedA1</name>
        <name evidence="2" type="ORF">PPSC2_04130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369452.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16930"/>
    <dbReference type="EnsemblBacteria" id="ADO54817">
        <property type="protein sequence ID" value="ADO54817"/>
        <property type="gene ID" value="PPSC2_04130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.823"/>
    <dbReference type="eggNOG" id="COG0586">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044208_1_0_9"/>
    <dbReference type="OMA" id="FMYGFRI"/>
    <dbReference type="OrthoDB" id="1928533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="140"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="25228" checksum="05C28AA38D353EC3" modified="2011-01-11" version="1">MDVLKWIAQLFEEYGYGVLFFGLLLEFIALPFPGETTMAYAGYLSYAGTLDFSKLVLLAFLGTTIGMTITYFIGKWAGLPFIQKYGKWVLLSPDKLQKTQKWFQRYGYWLIFLGYFIPGVRHFTGYFAGIIALSFRKFVLYAYSGALFWVVLFLSIGKLFGPQWDAIFHLVELYALRIAAVVGFLILLYFIYRWRSFLFGSLYKSKKSVKTSNKDDTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECV2</accession>
    <name>E3ECV2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ywbI1</name>
        <name evidence="3" type="ORF">PPSC2_04150</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54821.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886085.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16965"/>
    <dbReference type="EnsemblBacteria" id="ADO54821">
        <property type="protein sequence ID" value="ADO54821"/>
        <property type="gene ID" value="PPSC2_04150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.827"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54821.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="32107" checksum="3745876C3C67FA9E" modified="2015-05-27" version="2">MDIQNMQAFVSVAELRSLTEAAQKLNHLQSNMTAKIKKLEAYYGTALFYRKPRGMELTPAGEILYAQYKQILLLWQDTEMKMRLQEEKLRVGTMQSIVAGETTRALTKVYEMYPQASVTLKTGTTTEMEQFILDGELDIAFVTGYPTNPYIHYQKICREELVLVGKGIHEGSDLQQVLQGASIIILSDSCLYLRHLEKMYQDMQLTHGEVVEVGIFDTMVEFALMGMGITLMSKKLARQFKVTSYLPVPSIFGYMDTYLISRPNHEMTAIEHKFIEINNTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECV5</accession>
    <name>E3ECV5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">3-oxoacyl-[acyl-carrier-protein] synthase 3</fullName>
            <ecNumber evidence="9">2.3.1.180</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">3-oxoacyl-[acyl-carrier-protein] synthase III</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Beta-ketoacyl-ACP synthase III</fullName>
            <shortName evidence="9">KAS III</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fabH</name>
        <name evidence="12" type="synonym">fabH1</name>
        <name evidence="12" type="ORF">PPSC2_04180</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>acetyl-CoA + H(+) + malonyl-[ACP] = 3-oxobutanoyl-[ACP] + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:12080"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9625"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78450"/>
            <dbReference type="EC" id="2.3.1.180"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="9">The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the thiolase-like superfamily. FabH family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.180" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369459.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17000"/>
    <dbReference type="EnsemblBacteria" id="ADO54824">
        <property type="protein sequence ID" value="ADO54824"/>
        <property type="gene ID" value="PPSC2_04180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.830"/>
    <dbReference type="eggNOG" id="COG0332">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039592_3_1_9"/>
    <dbReference type="OMA" id="AIENLCT"/>
    <dbReference type="OrthoDB" id="872193at2"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033818">
        <property type="term" value="F:beta-ketoacyl-acyl-carrier-protein synthase III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01815">
        <property type="entry name" value="FabH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013751">
        <property type="entry name" value="ACP_syn_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004655">
        <property type="entry name" value="FabH_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08545">
        <property type="entry name" value="ACP_syn_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00747">
        <property type="entry name" value="fabH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 9" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 9" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACP_syn_III" evidence="11">
        <location>
            <begin position="109"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="ACP_syn_III_C" evidence="10">
        <location>
            <begin position="236"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="ACP-binding" evidence="9">
        <location>
            <begin position="253"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="36184" checksum="9F6A13F096973E74" modified="2011-01-11" version="1">MLNSKAKLTALGTYVPERILTNADLEKLVETSDEWIVQRTGMRERRIAAEDQYVSDLCIQAIKRMVNLYNVNVNDVDMIIVATSTPDYYFPSTASRIQAYFNIPNTGSMDVSAACAGFAYGLHLANGLITGGLHRKVLVIGAETLSKITDYTDRTTCVLFGDGAGVALVEYDEDEGSFLTADIGTFGQGGAHLYRAGLSNYLDGEKLQDNGFIAQNGREVYKWAVRSVPAGIERLMDKANMEKEDLDWFVPHSANLRMIESICEKSTVPLEKTLTSVEFYGNTSAASIPLALQCGLDDGRLRYGQHVVLYGFGGGLTYAGLLIKWSVPDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED11</accession>
    <name>E3ED11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">YerB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yerB</name>
        <name evidence="5" type="ORF">PPSC2_04425</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369514.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17255"/>
    <dbReference type="EnsemblBacteria" id="ADO54880">
        <property type="protein sequence ID" value="ADO54880"/>
        <property type="gene ID" value="PPSC2_04425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.884"/>
    <dbReference type="eggNOG" id="COG1470">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045984_0_0_9"/>
    <dbReference type="OMA" id="PGKTWIN"/>
    <dbReference type="OrthoDB" id="1022097at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.90.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035328">
        <property type="entry name" value="DUF3048_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021416">
        <property type="entry name" value="DUF3048_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023158">
        <property type="entry name" value="YerB-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11258">
        <property type="entry name" value="DUF3048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17479">
        <property type="entry name" value="DUF3048_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159774">
        <property type="entry name" value="SSF159774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168837" evidence="2">
        <location>
            <begin position="39"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3048" evidence="3">
        <location>
            <begin position="67"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3048_C" evidence="4">
        <location>
            <begin position="243"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF17479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="364" mass="40457" checksum="C2E96378EFCF8050" modified="2011-01-11" version="1">MSGPMFQRNHWLRVMASALLCMTMISCSALSNTGESESVPQPNQQETEKKVLEPPKEPSVPAFTAPLTGLPVEQPVIERPLAVMINNAPAARPQAGLSEADMVYEVLAEGGITRLVAFFQSHGGDVKIGPVRSIRPYLIELGETYGALPIHAGGSTDAYAILQQQRKEHLDEISNGGAYFWRSKDRRPPHNLYTDVSRLRKGSESKGYTKQTEVPVYPYLKTGETPVMVDESAASVHIRFLLKSYRVSYTYDRADQRYKRFVNEKSHLDQNNNQQLSAANVIVMSTRHRTLDDVGRLSVELDGSGEAMVFQQGQLIRAEWQHTSGDAIRFMKNGVEIPLTPGTSYIHVVPADTSLTEHVTFEAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED12</accession>
    <name>E3ED12_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YkaA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykaA</name>
        <name evidence="2" type="ORF">PPSC2_04430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0111 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369515.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17260"/>
    <dbReference type="EnsemblBacteria" id="ADO54881">
        <property type="protein sequence ID" value="ADO54881"/>
        <property type="gene ID" value="PPSC2_04430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.885"/>
    <dbReference type="eggNOG" id="COG1392">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086031_0_1_9"/>
    <dbReference type="OMA" id="LFNGKYD"/>
    <dbReference type="OrthoDB" id="1837604at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038078">
        <property type="entry name" value="PhoU-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018445">
        <property type="entry name" value="Put_Phosphate_transp_reg"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01865">
        <property type="entry name" value="PhoU_div"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="23955" checksum="0C2134CDF2866D1B" modified="2011-01-11" version="1">MRLKKKDIFFETLENMADTIVQAADYFAQHTSNFQDVTLFTNEMKKYENKCDDYTHTIITELNKTFITPLERDDIMELTTTMDDVLDGLEATASRFYMYNITEPDEYIVQFADILRQSAYEIQKAVHLLSQKKLLAIREYTIRLNDLENQGDELLRICIKNLFATVTDPIELIKRKELYERLETTTDSCEDVANMLESIIMRNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED35</accession>
    <name>E3ED35_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yclA</name>
        <name evidence="3" type="ORF">PPSC2_02125</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369032.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14890"/>
    <dbReference type="EnsemblBacteria" id="ADO54392">
        <property type="protein sequence ID" value="ADO54392"/>
        <property type="gene ID" value="PPSC2_02125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.401"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="CECHDSA"/>
    <dbReference type="OrthoDB" id="1439189at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="301" mass="34127" checksum="20C53058B93F82EC" modified="2011-01-11" version="1">MDLKHLHYFCVIVEEGQITKAARTLNMAQPPLSQQLKNMEDELGVKLIYREGKKWEVTEAGYTLYTRAKRLLAEMEDTCREIGEFENRVTGTLAIGTSSACMSLITEQLSHFHQVYPEVYVKIGHGDTHHLEELLHQNKVDLALLLLPVDNKSYHTIELEGVSFVAVLPCEWADRHPSGEITLQEAASYDLLLGRRTEGHGLYETVIRKFQEHHLIPRVVLDCPEISTILSLVSTGMGITIIPDAGLAQEYGDRFRTLSIKEPFPFTQPAVVWRKDRYLSNAARKFVELLQAGDTKKTVPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED59</accession>
    <name>E3ED59_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sortase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">srtA</name>
        <name evidence="3" type="ORF">PPSC2_02235</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0432"/>
    <dbReference type="EnsemblBacteria" id="ADO54416">
        <property type="protein sequence ID" value="ADO54416"/>
        <property type="gene ID" value="PPSC2_02235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.424"/>
    <dbReference type="eggNOG" id="COG3764">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045680_8_1_9"/>
    <dbReference type="OMA" id="TCYPFRL"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06166">
        <property type="entry name" value="Sortase_D_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005754">
        <property type="entry name" value="Sortase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042000">
        <property type="entry name" value="Sortase_D_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023365">
        <property type="entry name" value="Sortase_dom-sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04203">
        <property type="entry name" value="Sortase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63817">
        <property type="entry name" value="SSF63817"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01076">
        <property type="entry name" value="sortase_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="23874" checksum="0EA4F0D95FE3AD4F" modified="2011-01-11" version="1">MRKLAYVSIILGIIIMLFPTANEWLEDQKQKELLQEAESLSNTDTSTLTPEMMKGYTDLSNWLTNTAAADGPQLSQATPPSSASEQAPIATIQIDRIGLELPVLEGATQQHMRYAAVHMSETATLGQVGNAAIAAHRSRTTGRLFNRLNEVKIGDQILIHTRGEKYVYKVYNISVVTPSNVSVLKSIKKQKLLTLITCDPLVNPTHRLIVHARQLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDD8</accession>
    <name>E3EDD8_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Methenyltetrahydrofolate cyclohydrolase</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="primary">ftcd</name>
        <name evidence="2" type="ORF">PPSC2_04585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369550.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EDD8"/>
    <dbReference type="STRING" id="1406.LK13_17480"/>
    <dbReference type="EnsemblBacteria" id="ADO54917">
        <property type="protein sequence ID" value="ADO54917"/>
        <property type="gene ID" value="PPSC2_04585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.921"/>
    <dbReference type="eggNOG" id="COG3404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_088419_0_0_9"/>
    <dbReference type="OMA" id="TIGKEKY"/>
    <dbReference type="OrthoDB" id="1965647at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.680">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007044">
        <property type="entry name" value="Cyclodeamin/CycHdrlase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036178">
        <property type="entry name" value="Formintransfe-cycloase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04961">
        <property type="entry name" value="FTCD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101262">
        <property type="entry name" value="SSF101262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FTCD_C" evidence="1">
        <location>
            <begin position="9"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="211" mass="23046" checksum="78D37CA139D9DA64" modified="2011-01-11" version="1">MSELSWNQSIAHFLKEAASAAPTPGGGSVSALAAALGAAMTSMTANLSQGEKYAHFREQFAQVISSMERLSIHCEELMAADIQSFEQYMTALRLPKETDEEKRYRTHSLQTAVIAAIEVPMRLLEVCRDGLSQAYNIVEISNKNVISDLGIGAILFEAAAQSALLTIDINLTSLKDLDVKQSYEAKTAVLLREIGQIKEQTLLTVRSRIAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDQ1</accession>
    <name>E3EDQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Iron ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fecD1</name>
        <name evidence="8" type="ORF">PPSC2_06640</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369990.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19605"/>
    <dbReference type="EnsemblBacteria" id="ADO55359">
        <property type="protein sequence ID" value="ADO55359"/>
        <property type="gene ID" value="PPSC2_06640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1367"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_0_3_9"/>
    <dbReference type="OMA" id="FIHSSTI"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="71"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="201"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="248"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="287"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="318"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="348" mass="37221" checksum="DDC63A1764AAABB8" modified="2011-01-11" version="1">MNRRLIGFGGTGLVLLLLTLLLCLGIGSVSLPVSQITGILINHLPWLGDTFTPDWNTSSEQIILKVRLPRVLLGMLVGAALALAGAGFQGVLRNPLADPYTLGVSSGASVGAAVLIYWGLQFSFVGIWTLPLVAFITGMLTLWMVLTLAREGGKIPTQSLILSGVVMQFFGGAIVSFLAAMSKETVNEILYWTMGSLSLRGWSYTGILLPYVIVGLVFLWNRARVLNILALGERQAAHMGVHVDATKLSVLIISTLLTAAAVSVCGVIGFVGLVVPHIIRLMAGPDYRMIVPLSALGGAIFMAWADTAARTLLAPMEIPLGVMTAFVGAPFFAYLLYRNKKLRRGDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDX5</accession>
    <name>E3EDX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA-binding protein S1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rps1</name>
        <name evidence="3" type="ORF">PPSC2_00260</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368688.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13275"/>
    <dbReference type="EnsemblBacteria" id="ADO54041">
        <property type="protein sequence ID" value="ADO54041"/>
        <property type="gene ID" value="PPSC2_00260"/>
    </dbReference>
    <dbReference type="GeneID" id="66574913"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.51"/>
    <dbReference type="eggNOG" id="COG1098">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_128762_0_0_9"/>
    <dbReference type="OMA" id="SFMRDAK"/>
    <dbReference type="OrthoDB" id="1235756at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="6"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="74"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="139"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="18052" checksum="332C949843BF7E81" modified="2011-01-11" version="1">MAIEVGTKLEGKVTGITHFGAFVDLSGGVTGLVHISEIADNYVKDVNDHLKINDVVTVKVINVDKDGKIGLSIKQTIDKPASEARPPRAPRPERTGGPGGGDRFGGGGSGPSQGRGGGFNRDRGGRSFKPAPGKPSFEDKMSRFLKDSEERISSLKKNTEGKRGGRGAKRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE02</accession>
    <name>E3EE02_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 12">Phosphatidylglycerol lysyltransferase</fullName>
            <ecNumber evidence="5 12">2.3.2.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11 12">Lysylphosphatidylglycerol synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 14" type="primary">mprF</name>
        <name evidence="14" type="ORF">PPSC2_02635</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Catalyzes the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) + L-lysyl-tRNA(Lys) = 1,2-diacyl-sn-glycero-3-phospho-1'-(3'-O-L-lysyl)-sn-glycerol + tRNA(Lys)</text>
            <dbReference type="Rhea" id="RHEA:10668"/>
            <dbReference type="Rhea" id="RHEA-COMP:9696"/>
            <dbReference type="Rhea" id="RHEA-COMP:9697"/>
            <dbReference type="ChEBI" id="CHEBI:64716"/>
            <dbReference type="ChEBI" id="CHEBI:75792"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78529"/>
            <dbReference type="EC" id="2.3.2.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 12">Cell membrane</location>
            <topology evidence="3 12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the LPG synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.3" evidence="5 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369122.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15400"/>
    <dbReference type="EnsemblBacteria" id="ADO54482">
        <property type="protein sequence ID" value="ADO54482"/>
        <property type="gene ID" value="PPSC2_02635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.491"/>
    <dbReference type="eggNOG" id="COG0392">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2898">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008255_7_1_9"/>
    <dbReference type="OMA" id="WEPRYMA"/>
    <dbReference type="OrthoDB" id="542304at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050071">
        <property type="term" value="F:lysyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022791">
        <property type="entry name" value="L-PG_synthase/AglD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024320">
        <property type="entry name" value="LPG_synthase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09924">
        <property type="entry name" value="LPG_synthase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03706">
        <property type="entry name" value="LPG_synthase_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="12" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12 14" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="25"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="103"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="136"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="177"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="214"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="246"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="293"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="353"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="397"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="427"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="451"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="480"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="524"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="855"/>
            <end position="875"/>
        </location>
    </feature>
    <feature type="domain" description="LPG_synthase_C" evidence="13">
        <location>
            <begin position="565"/>
            <end position="858"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00021546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00031899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU363042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF09924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO54482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="880" mass="100019" checksum="2AEC8173D83AC186" modified="2011-01-11" version="1">MNSNHKPFQSFKIVQYMMTIYRQRLTRILLPLAVLAFIIWEAGRELKDFNLARMLHELRRMDATFLIEIGLFSLVAVAAMSAYDYVIRHHFKLQVKPGTTFRYAWISNTFNNVFGFAGFTGAGLRTVLYKKSGVPLGVITSAVVFLSPVVITGLSLLAWGAIVHLYPVQPVLDAHPWLHWALWGMALYLPLFLIMQRSKRYATWFNKGEGQLSWFTISASIGASLLEWLLAGLTFAWIGSHLLHELPLHAVFGIYVIAAIAGLISLAPGGVGAFDIIALLGLQMAGANSDRALAVLLVFRVFYYIIPWLIGLVLAALEMIPRNERLSQLAETGWDYSLNAWQKVWGWPGQFRFLADLGVWALGKLVLISGVVLLLSAATPGLLYRLRFAEHLLSLPVMRLSHEISVIIGIMLVVLSHGISLRIRRALRLTLILLLTGAIFTFTKGLDFEEAFFLLFVALMLWISRSRFYRVSAPLNRHNILIWGGLSLLVTGAYFMIGAGSNTPFMRHIHAKVHLDFFMNRSDYGVTAVFSLILAWVFLTVYFFLRPQRSISNLPDAQELVKLKEFLERQGGNLVSHMLFLGDKYLYWTKDEQVVLPYARSRDKLIVLGDPLGPKERVSEAIQEFQRFADRYALTAVFYQASPEYLSIYHENGYRFFKLGEEALVPLESFTLTGKSNQALRSAKNRFDREGYSFEMVQPPLEASLIEEMRHISDIWLDGRKEKGYSLGWFKESYLQLAPIALLRDSEGKVIAFATMAPAYDHGQTVSIDLMRHLPDTPNGTMDYLFTRVIEWAKESGYTTFNLGMAPLSQVGQSEKALREEKLARLVFQYGGHFYGFQGLRRFKDKFKPQWEPRYLAYPASVFLPILTLELVYLVSKRSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE12</accession>
    <name>E3EE12_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-645</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-645</name>
        <name evidence="2" type="ORF">PPSC2_02685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369132.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54492">
        <property type="protein sequence ID" value="ADO54492"/>
        <property type="gene ID" value="PPSC2_02685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.501"/>
    <dbReference type="eggNOG" id="ENOG50305Q5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1617381_0_0_9"/>
    <dbReference type="OMA" id="MPWRMEL"/>
    <dbReference type="OrthoDB" id="1652613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="144"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="164" mass="18089" checksum="B59FA2CDA87AAE8D" modified="2011-01-11" version="1">MRQPWNEFNSKMPWRMELGCYALNKLACGGLVFGLLWVYCYLTEEITGLPVSIAGNSGELTAQLWAYGFALPAALAADALRDLLPWLRKPEQFTLYLAVGSSVFLLLGSLMSPAGTGISWSNGIAGAGITLLYYGGRHWLNREYGVQIMLAFLLPLLLWIIGLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE44</accession>
    <name>E3EE44_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">CoA-disulfide reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ndh1</name>
        <name evidence="3" type="ORF">PPSC2_02825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369164.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15640"/>
    <dbReference type="EnsemblBacteria" id="ADO54524">
        <property type="protein sequence ID" value="ADO54524"/>
        <property type="gene ID" value="PPSC2_02825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.535"/>
    <dbReference type="eggNOG" id="COG0446">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0607">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003291_1_2_9"/>
    <dbReference type="OMA" id="ITHAPCG"/>
    <dbReference type="OrthoDB" id="1149616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="465"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="554" mass="60647" checksum="BB8AD3E6B52EA413" modified="2011-01-11" version="1">MGRKIIIIGGVAGGASAAARLRRWSEEDEIILFERGEHVSFANCGLPYYIGGTIQAREKLFLQTPQGIRDRFNIDVRVQKEVIQIDREHKLVHYRDMITGETDEQPYDIVVLSPGAKPMIPDIPGLHEATNVFTLRNIHDTDLIKAYVDERHPKHATVIGAGFVGLEMAENLRERGLAVTIMDKGQQLLNPLDPEMAKLVEQHVKLNGVEVRLEEGVAAFEEQGTQLRLTSGEMLQTDLVILAIGVVPENELAKQCGLELGFRGAIQVNAQLQTSDPSIYAVGDAIQVKDRNHGFATMVSLAWGANRQGRLAADHINGQAISYDGALGTSVIKTFALTAASTGNNEKTLQRLAVPYQAIHIHPGSHAGYYPGASPISMKLLFHPETGMIYGAQAVGADGADKRIDVIATAIRGHLNVRELADIELAYAPPYSSAKDPVNMAGYVASNIMDGLVQTIQWHEVDDFHRNGGLVIDVRDAVELQGGTIPGSMHIPLVEIRERMSEIPRDLEIAVSCQVGLRGYLAARILTQSGYRVRNVDGGYKTYSVMAKRDHLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE57</accession>
    <name>E3EE57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">YhcI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yhcI</name>
        <name evidence="7" type="ORF">PPSC2_04885</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369613.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17780"/>
    <dbReference type="EnsemblBacteria" id="ADO54980">
        <property type="protein sequence ID" value="ADO54980"/>
        <property type="gene ID" value="PPSC2_04885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.984"/>
    <dbReference type="eggNOG" id="COG1277">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050687_0_1_9"/>
    <dbReference type="OMA" id="ANIHLIY"/>
    <dbReference type="OrthoDB" id="1745385at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032688">
        <property type="entry name" value="ABC2_membrane_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12679">
        <property type="entry name" value="ABC2_membrane_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="18"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="108"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="151"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="199"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="231"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="283"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="35140" checksum="ABC37691C62CDC63" modified="2011-01-11" version="1">MIQLIRNENMKIYKRKRTWFIIILLILYVLIQMANLKSSGMTEYNEGWKTLLQHENSKLTRDAAKSDALPIEKKMAAEKILMNQYYLDHNIAPQSNAWSFTVSQSRNLIVGISLLALIVAGDIVASEFSAGTIKFLLTRSATRSKIYFSKYIATLLFGLFLVLLTFLAAIFFGGLMFGFKGIGDPYLFVKDQTIQQADMIQALLGGFLFNIPFMVIVLTFAFMISAAFRSVTFSIVFSMLAAIAGFVLSITMNGWPWTKYFVFSSTDLNPYFFGTTPVEGMTLGFSLFLLLLHLVAMHLVSYPIFTKRDVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA6</accession>
    <name>E3EEA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA-directed RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sigE1</name>
        <name evidence="4" type="ORF">PPSC2_05120</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369662.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18040"/>
    <dbReference type="EnsemblBacteria" id="ADO55029">
        <property type="protein sequence ID" value="ADO55029"/>
        <property type="gene ID" value="PPSC2_05120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1037"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_4_9"/>
    <dbReference type="OMA" id="KMAYHHL"/>
    <dbReference type="OrthoDB" id="1914729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="2">
        <location>
            <begin position="35"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="3">
        <location>
            <begin position="125"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="23059" checksum="1BA091FCB0A39A82" modified="2011-01-11" version="1">MQATIPGDQQDKHSQIELAVERVKAGEQQAYEIIIRQFERQMYTYCFYILKNHEATEDAVQDIFIRAYENLHQYSRQTSFSAWLYKMAYHHLMNIKKKHSRWLRLVQQVKEQDPIVQVSPYKSVIEELLTYLTPEERHILLLKAVEQYSFEEISNIMGLKSATIRKKYERLRRKLLDHRSKGGLVNGQTPNTTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEC3</accession>
    <name>E3EEC3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hmpP2</name>
        <name evidence="1" type="ORF">PPSC2_05205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369679.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1064"/>
    <dbReference type="EnsemblBacteria" id="ADO55046">
        <property type="protein sequence ID" value="ADO55046"/>
        <property type="gene ID" value="PPSC2_05205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1054"/>
    <dbReference type="eggNOG" id="COG0561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044146_7_2_9"/>
    <dbReference type="OMA" id="ICTGRSM"/>
    <dbReference type="OrthoDB" id="1861282at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000150">
        <property type="entry name" value="Cof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00099">
        <property type="entry name" value="Cof-subfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="31238" checksum="96A9A138DD49EA0D" modified="2011-01-11" version="1">MNKKIIFLDIDGTLVDDDGMIPESAKTACIEARKNGHLIYLCTGRSKAEIYDFIMEIGFDGIIGAGGGFVEIEGEMLYHHKVSDEDVRHMVDYFDEHDLDFYLESNGGLFASKNFLPHVERLIYGDVDNDPVAREKKEQRPHPFITGLTIGEDNLYRSDVNKACFLENKNVPFEQIKKEFAGKFEVIQCTVSAFGQDSGELMVPGIHKAVAIEKLIEHLGRSQEDTIAIGDGMNDAEMIEYCALGIAMGNAKPGLKAIADDITDAVDEDGLFHSFKKHSLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEF8</accession>
    <name>E3EEF8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nreC3</name>
        <name evidence="6" type="ORF">PPSC2_06870</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370040.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19840"/>
    <dbReference type="EnsemblBacteria" id="ADO55409">
        <property type="protein sequence ID" value="ADO55409"/>
        <property type="gene ID" value="PPSC2_06870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1416"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061962_0_0_9"/>
    <dbReference type="OMA" id="ELQVCAF"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="5">
        <location>
            <begin position="297"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="363" mass="40794" checksum="B916DE98019E8BE8" modified="2011-01-11" version="1">MNAHNTPFAQLKKNRQPIMEMGSKSPSSPTYKHTLIDRLRTQISFDAACCTSVDPRTLLSTGAFTESGVEGIHSKLLEYEYLHDDIMKYDQLVREGQSIATLHGSTQGQPDRSTRFRNVLQPAGFGDELRVPFMYKGSCWGFLTLFRHHGKPVFSTEEQQLLEALAPSIAYHLRQTSVSVSPVSAMIMEHELEPGVLTLSTQLTPLSSNIVAEQWLKLLRQQEGIHDGELPASVRAVSLRALSTSTAPARLCIPSADAETPWVTIRATLLQGGREHMGEKQLAVWFEPAKATDMLPLMAEIYSWTERERQLVRLIVQGFSTKELASALHITAYTVQDHLKAIFLKTEVSSRRELVWKVYSRFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EER7</accession>
    <name>E3EER7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA alkylation repair protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yhaZ1</name>
        <name evidence="1" type="ORF">PPSC2_08425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370373.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21035"/>
    <dbReference type="EnsemblBacteria" id="ADO55754">
        <property type="protein sequence ID" value="ADO55754"/>
        <property type="gene ID" value="PPSC2_08425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1771"/>
    <dbReference type="eggNOG" id="COG4335">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_088207_0_0_9"/>
    <dbReference type="OMA" id="SVGNWLN"/>
    <dbReference type="OrthoDB" id="1292527at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014825">
        <property type="entry name" value="DNA_alkylation"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08713">
        <property type="entry name" value="DNA_alkylation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="31171" checksum="CFF4A7C3A1EA26BD" modified="2011-01-11" version="1">MLHRKGARKRTDIPTDVLQLLQQGQLETVNLTEWLAVDHVVLLRNALDEFGLQRSFNVFLTELDHLKEKKIMKMIPAIAQAWLHVFEQQALEERTRLFDAMASHLSDSIRCWAAYIIGIDSRLSLEEKLAGIRPFAADSHFGVREIAWMAMREPIFLQLDEALALLNSWVRNEDANIRRFAIELTRPQGVWAKHIPELKEHPELALPLLEAVQSDPVKYVQDSVGNWLNDASKTNPEWVTQVCDTWLMTSDTKETKRIVTRAQRSLNKMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEU7</accession>
    <name>E3EEU7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Thiamine pyrophosphate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fusD</name>
        <name evidence="7" type="ORF">PPSC2_00400</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368716.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EEU7"/>
    <dbReference type="STRING" id="1406.LK13_13415"/>
    <dbReference type="EnsemblBacteria" id="ADO54070">
        <property type="protein sequence ID" value="ADO54070"/>
        <property type="gene ID" value="PPSC2_00400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.80"/>
    <dbReference type="eggNOG" id="COG0028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013748_3_1_9"/>
    <dbReference type="OMA" id="GKGAFPW"/>
    <dbReference type="OrthoDB" id="391134at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="6">
        <location>
            <begin position="9"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="4">
        <location>
            <begin position="191"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="5">
        <location>
            <begin position="411"/>
            <end position="482"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="566" mass="62329" checksum="25F98E5F1A1A4A3C" modified="2011-01-11" version="1">MTASISPWDAIIGYLQSAGVQHLFGLPSDDLNIVASLPSSGMDFILCKDQRNAVFMSAGYALTTNQMSVCVVGKGPALSNTLTGLLEAKNLGAPLLLLALGTGGDKLGTRSFQEADQISLVKPLVKWAYRVEHVDRLVWAMERAAFLTINGAPGPVYIELPENLMDQPVPTELQFAPPEKLSCSPSLRELDAAWSIIETARKPLILVGGGMKSGTGDAIERFASQHGAALFATASGRSVINEDHALFCGVAGLYTDLSLRQIWNESDVVITLGSRLEETATFEWDILLQDTPLIQVNVELEDFAHEFRGIKLLGDGYAAVEQWLERRGQEPDEAWLETIGRCKQKAFSQRANYLEELKRAPGIHVPELLDMIQAEFPEDLVLLQENGLQDMWSYFYPYFRFASGSLSIVPSDQTSLGFGAAAALGASVATERPVVALVGDGAFNLFCSDFMTAVQYQIPVIYLVLNNGGYGWLQNQMNYKHISGQDFPFVSEAVKTGIQIPQYEFVESLAIRSKGEAREQLQLAWQKYKENKLVVVEVFADLADVHEKISHVYGDFPLYEQQASKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF00</accession>
    <name>E3EF00_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Beta-lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ysh1</name>
        <name evidence="3" type="ORF">PPSC2_00670</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54123.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599365.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13660"/>
    <dbReference type="EnsemblBacteria" id="ADO54123">
        <property type="protein sequence ID" value="ADO54123"/>
        <property type="gene ID" value="PPSC2_00670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.132"/>
    <dbReference type="eggNOG" id="COG1236">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_640477_0_0_9"/>
    <dbReference type="OrthoDB" id="580619at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="16"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="440"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54123.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="461" mass="52306" checksum="8DB43197A231E866" modified="2015-05-27" version="2">MMMTKLRIWGGAGEHGRSCYVFEGKQHRIMLDCGVKKEGIGQYPIFPPQKVKELTTVLLSHAHEDHSMALPLLYKYGYRGEVWTTKATAEQLGSYFRSWQTYVESRGGELPYSEQDIQSITYRYLEDGAPSGVWCEACPGVRMMWGRSGHLAGAVWYIIEMEGKRLFFSGDYSRESELLAADAPDLCMGEGINDLPECKPQSYLVDISIMDNAYGMDIDPQPVKLERLRVEMEQILWSGGHVLLPVPAFGRGQELIVWASEQFPEQAIIVEPDLWHGLKQLNRWREWLRPGASTRIKHVLNSDRVFVPRDAAERISLLERNTATIIVTRDGMMDSPQARWYYQYLSDNRHMLNDMDSGENIRNSVILTGHASNGSFGKHLLERADSNDICIARHLTYKVHQGLSDVRQMLKDLPSKQAVLVHAPKPQTDLVRDVLIREENNAHGGPAREVHSVEPGSTIEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF14</accession>
    <name>E3EF14_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nucleoside-diphosphate sugar epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-688</name>
        <name evidence="2" type="ORF">PPSC2_02865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369174.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15680"/>
    <dbReference type="EnsemblBacteria" id="ADO54534">
        <property type="protein sequence ID" value="ADO54534"/>
        <property type="gene ID" value="PPSC2_02865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.545"/>
    <dbReference type="eggNOG" id="COG0702">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071330_2_0_9"/>
    <dbReference type="OMA" id="FCCIGTT"/>
    <dbReference type="OrthoDB" id="948454at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="9"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="25855" checksum="4D1C026515B0FE8A" modified="2011-01-11" version="1">MERKAVVVGGTGLVGGYVVRELLVQKEYTRVMVMGRRPLDIKHPKLEQALIDWKQPQKSAFALEGVDDVFCCLGTTMKKAGSKERFRQVDLDYPVLTAQLGKEAGAVQMLAVSAMGADPDSRVFYNRTKGEAEEALAAIGLPALHLFRPSLILGARPERRFGEAAATVVMKALDGLMTGRLASYRAIPASFIARAMVRIALAQASGVHIYPNDIIRVIGAELTSDDEEPGTGTTPDDNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF25</accession>
    <name>E3EF25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_02915</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369184.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15730"/>
    <dbReference type="EnsemblBacteria" id="ADO54545">
        <property type="protein sequence ID" value="ADO54545"/>
        <property type="gene ID" value="PPSC2_02915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.554"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_1_9"/>
    <dbReference type="OMA" id="WISIKIT"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="298"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="319"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="604" mass="69140" checksum="B46B5F8D7475163C" modified="2011-01-11" version="1">MKFHSIRSRLIWFLLIAVTLPLLLSMTMTFILTKQSLREQATQENERLIFQGITNLDNYLQGLNRASIGVYNDPHFLRNLAKIPDDYRAVAEIYTTLQTMMNASSGIDQVYLHSFEAGQSTLITSTVPLREFRLEPFTGSIHYGPSGLFMQPSHIKHLYGFSAVSYAEQNTKRQVFTLHRAIRNIPSSETLGVLAIDVDLEPLRSICRQLYDADTEELFLIDRNGTIVYSGKESFIGTHWKESGLLKRISKEDEHGVIEDDTALHVYGKLDANLSGWTLVKKIPHRTLYLRATQLTQINAVITGAALLLVIVATLWISIKITEPIKRLTRYINQIQSGQLDVDIRAMSNDEIGVLSRRFRQMMDTINNLILREYKLELANKTHQLKALQAQINPHFLYNTLQSIGTLALQHEVPRIYSLLSSLAKMLRYNMRDHTVVTLKEEAEHVKQYLDLQKERFGEQLEVTYQWDDEVLNDRVPKMILQPLVENYFKHGADPRLGPGKIHITACRIREGIVRIEVENNGASIPPTELEQLQQMLKRPLKAHEESDTSEQNSIGLRNVLLRIQLHSEDGSNTLCVDNILPHGVRFTLEIRTEPHTENHIKGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF27</accession>
    <name>E3EF27_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">amyC1</name>
        <name evidence="7" type="ORF">PPSC2_02925</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369186.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15740"/>
    <dbReference type="EnsemblBacteria" id="ADO54547">
        <property type="protein sequence ID" value="ADO54547"/>
        <property type="gene ID" value="PPSC2_02925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.556"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_2_9"/>
    <dbReference type="OMA" id="EYAIFFR"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="107"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="140"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="244"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="72"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="31316" checksum="BD5B13E1C8739F50" modified="2011-01-11" version="1">METNNRYRVGTWATELVMILVALVFLVPFYFLFVNSVKSFGDLLTDSAAWPQTFVWSNYARAWSITRFPEALWNSLVVTVVSNLLLVLISSMAAYRMVRRPTRYNRVLFSLFVAAMVIPFQSVMIPLVKVVSTLDLMNSISGLVICYLGFGAPMSIFLFHGFVKGVPVEVEEAATVDGCTPYGVFFRIVYPLMLPMMVTVIILNTLWIWNDYLLPSLVLQKAELRTIPIATYAFFGQYTKQWDLALPALVLGILPVIAFFLAMQKYIIQGIMAGSVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFF1</accession>
    <name>E3EFF1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrpA</name>
        <name evidence="5" type="ORF">PPSC2_05500</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369747.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18410"/>
    <dbReference type="EnsemblBacteria" id="ADO55114">
        <property type="protein sequence ID" value="ADO55114"/>
        <property type="gene ID" value="PPSC2_05500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1118"/>
    <dbReference type="eggNOG" id="COG1522">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_091233_3_2_9"/>
    <dbReference type="OMA" id="CYGPRCV"/>
    <dbReference type="OrthoDB" id="1844486at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="6"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16060" checksum="89E6ACAECA4F0F18" modified="2011-01-11" version="1">MELFVPDDTDLRILHHLIEDSSLTHKEIGQLVHLTGQAVGTRVRKMQDAGIIEGYTLRWNPEKIGQTIHAFITVFLNSGTTHSAFQTFAREHPSIVEIHRVSGEGCYWMRVRMSSQSELNTMLDELTKFGNYKLSFSIGEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFF8</accession>
    <name>E3EFF8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glycosyl hydrolase family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bglC1</name>
        <name evidence="5" type="ORF">PPSC2_05545</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the glycosyl hydrolase 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369754.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18450"/>
    <dbReference type="CAZy" id="GH3">
        <property type="family name" value="Glycoside Hydrolase Family 3"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55121">
        <property type="protein sequence ID" value="ADO55121"/>
        <property type="gene ID" value="PPSC2_05545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1127"/>
    <dbReference type="eggNOG" id="COG1472">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004542_5_1_9"/>
    <dbReference type="OMA" id="GPTINTQ"/>
    <dbReference type="OrthoDB" id="419160at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1700">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026891">
        <property type="entry name" value="Fn3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019800">
        <property type="entry name" value="Glyco_hydro_3_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002772">
        <property type="entry name" value="Glyco_hydro_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036881">
        <property type="entry name" value="Glyco_hydro_3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001764">
        <property type="entry name" value="Glyco_hydro_3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036962">
        <property type="entry name" value="Glyco_hydro_3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14310">
        <property type="entry name" value="Fn3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00933">
        <property type="entry name" value="Glyco_hydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01915">
        <property type="entry name" value="Glyco_hydro_3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00133">
        <property type="entry name" value="GLHYDRLASE3"/>
    </dbReference>
    <dbReference type="SMART" id="SM01217">
        <property type="entry name" value="Fn3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52279">
        <property type="entry name" value="SSF52279"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00775">
        <property type="entry name" value="GLYCOSYL_HYDROL_F3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fn3_like" evidence="4">
        <location>
            <begin position="665"/>
            <end position="734"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="752" mass="83553" checksum="22589C57BAC3B2C1" modified="2011-01-11" version="1">MDNKTLLEKLNSLSIEEKIGQLIQLTGDFFEGDMDTVVTGPLKKLGLNTDYNIYNTGFILNITNPEKIIRLQTDYLEKSVHKIPLLFMADIIYGYRTIFPIPIAQACSWNYEEIENAASIAAQECYDEGIHVTFSPMVDMVRDPRWGRVMESPGEDTLLAKKYAQSVVLGIQGSNLESTAVPANKIAACVKHFAAYGAPVAGREYNAVDLSEHALREYYLPGYQAAIEAGAKLVMTAFNTLNGIPATGNEWLNRDVLRQEMNFDGVLISDYAAIEELIMHGYAEDEASAARLALLAGVDVDMKTAVYANQLKDVISDNSYMLELLNEAVYRVLKLKNDLGLFEDPYRGLQEIVKRSTSSILSDEHKQAALSLAEESVVLLKNENNVLPLSKETKVALMGPYAEENSTLGMWAIKGEQTDTINLKTGLLQLVGSDNLSVCRGSYLLPPDARETFDKYADKLAVETGSEEVLLQEAIRNANEAEVIVLALGESIYQSGEGGSRTNPTLPEPQLRLLHELSLLGKRIVLIVYSGRPLILTDVAGKVDAIVQAWYPGTMGGEALANILYGEVNPSGKLAMTFPRSVGQIPVYYNELNTGRPNLKENGSYRFASRYIDEVNEPLYPFGYGLSYTSFEYSLLTVSQKEMKTNESVDIRISVSNTGTYAGKETIQLYIRDKFASVARPVKELKDFKKVFLQSGETTIVEFSVDEDMLKFYGREMEYKSEPGEFEVYIGSSSQDILLSFSFTLLPEDKHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFG3</accession>
    <name>E3EFG3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">6-carboxy-5,6,7,8-tetrahydropterin synthase</fullName>
            <ecNumber evidence="5">4.1.2.50</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Queuosine biosynthesis protein QueD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ygcM</name>
        <name evidence="11" type="ORF">PPSC2_05570</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>7,8-dihydroneopterin 3'-triphosphate + H2O = 6-carboxy-5,6,7,8-tetrahydropterin + acetaldehyde + 2 H(+) + triphosphate</text>
            <dbReference type="Rhea" id="RHEA:27966"/>
            <dbReference type="ChEBI" id="CHEBI:15343"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:58462"/>
            <dbReference type="ChEBI" id="CHEBI:61032"/>
            <dbReference type="EC" id="4.1.2.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; 7-cyano-7-deazaguanine biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the PTPS family. QueD subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.50" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369759.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18475"/>
    <dbReference type="EnsemblBacteria" id="ADO55126">
        <property type="protein sequence ID" value="ADO55126"/>
        <property type="gene ID" value="PPSC2_05570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1132"/>
    <dbReference type="eggNOG" id="COG0720">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111016_1_2_9"/>
    <dbReference type="OMA" id="KCEKLHG"/>
    <dbReference type="OrthoDB" id="1770189at2"/>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070497">
        <property type="term" value="F:6-carboxy-5,6,7,8-tetrahydropterin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007115">
        <property type="entry name" value="6-PTP_synth/QueD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038418">
        <property type="entry name" value="6-PTP_synth/QueD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12589">
        <property type="entry name" value="PTHR12589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01242">
        <property type="entry name" value="PTPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03367">
        <property type="entry name" value="queuosine_QueD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00018141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="19216" checksum="F93FC49CFA907A18" modified="2011-01-11" version="1">MREPGTFRIVDKLQQFGTDIERSQLRYHRKRVLVSKQFTFDAAHHLHCYEGKCKNLHGHTYIVVFGISGIPGETGLTLDFGDIKTIWKERIEPFLDHRYLNETLPPMNTTAENMVVWIFEQMESALTSDAYCNRVEGGRTEFVRLFETPTSYAEFRREWMFDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFJ1</accession>
    <name>E3EFJ1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Corrinoid adenosyltransferase</fullName>
            <ecNumber evidence="4">2.5.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Cob(II)alamin adenosyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Cob(II)yrinic acid a,c-diamide adenosyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Cobinamide/cobalamin adenosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">MMAB</name>
        <name evidence="6" type="ORF">PPSC2_07205</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2 ATP + 2 cob(II)alamin + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)alamin + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:28671"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2 ATP + 2 cob(II)yrinate a,c diamide + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)yrinate a,c-diamide + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:11528"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="ChEBI" id="CHEBI:58503"/>
            <dbReference type="ChEBI" id="CHEBI:58537"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 2/7.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the Cob(I)alamin adenosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.17" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370109.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20185"/>
    <dbReference type="EnsemblBacteria" id="ADO55482">
        <property type="protein sequence ID" value="ADO55482"/>
        <property type="gene ID" value="PPSC2_07205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1488"/>
    <dbReference type="eggNOG" id="COG2096">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083486_0_1_9"/>
    <dbReference type="OMA" id="HQACTVV"/>
    <dbReference type="OrthoDB" id="1401910at2"/>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008817">
        <property type="term" value="F:cob(I)yrinic acid a,c-diamide adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016030">
        <property type="entry name" value="CblAdoTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036451">
        <property type="entry name" value="CblAdoTrfase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029499">
        <property type="entry name" value="PduO-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12213">
        <property type="entry name" value="PTHR12213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01923">
        <property type="entry name" value="Cob_adeno_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89028">
        <property type="entry name" value="SSF89028"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00636">
        <property type="entry name" value="PduO_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cob_adeno_trans" evidence="5">
        <location>
            <begin position="3"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU366026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="21204" checksum="86AF291D82FD2FB3" modified="2011-01-11" version="1">MGIYTRTGDEGQTSVIGGRVSKDDDRVEAYGTIDELNSFVGQAISFAEGEKFADIRTQLEEIQQELFDCGSDLAFVKINESKYKVKDELAERLEGWIDACQEENPKVERFIIPGGSTLSSTLHVCRTVCRRAERRAVTLGKHTDINPAVRRYLNRLSDYFFVVARTANVRQGVPDVEYVRSKKVFRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFL9</accession>
    <name>E3EFL9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Putative tRNA (cytidine(34)-2'-O)-methyltransferase</fullName>
            <ecNumber evidence="1">2.1.1.207</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">tRNA (cytidine/uridine-2'-O-)-methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cspR</name>
        <name evidence="4" type="ORF">PPSC2_07335</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Could methylate the ribose at the nucleotide 34 wobble position in tRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>5-carboxymethylaminomethyluridine(34) in tRNA(Leu) + S-adenosyl-L-methionine = 5-carboxymethylaminomethyl-2'-O-methyluridine(34) in tRNA(Leu) + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:43088"/>
            <dbReference type="Rhea" id="RHEA-COMP:10333"/>
            <dbReference type="Rhea" id="RHEA-COMP:10334"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74508"/>
            <dbReference type="ChEBI" id="CHEBI:74511"/>
            <dbReference type="EC" id="2.1.1.207"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>cytidine(34) in tRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(34) in tRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:43084"/>
            <dbReference type="Rhea" id="RHEA-COMP:10331"/>
            <dbReference type="Rhea" id="RHEA-COMP:10332"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74495"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.207"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.207" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370137.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20315"/>
    <dbReference type="EnsemblBacteria" id="ADO55510">
        <property type="protein sequence ID" value="ADO55510"/>
        <property type="gene ID" value="PPSC2_07335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1516"/>
    <dbReference type="eggNOG" id="COG0219">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_110125_0_0_9"/>
    <dbReference type="OMA" id="AGLDYWH"/>
    <dbReference type="OrthoDB" id="1578095at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008175">
        <property type="term" value="F:tRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd18094">
        <property type="entry name" value="SpoU-like_TrmL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01885">
        <property type="entry name" value="tRNA_methyltr_TrmL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001537">
        <property type="entry name" value="SpoU_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016914">
        <property type="entry name" value="tRNA_cyt/urid_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42971">
        <property type="entry name" value="PTHR42971"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00588">
        <property type="entry name" value="SpoU_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029256">
        <property type="entry name" value="SpoU_TrmH_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00185">
        <property type="entry name" value="tRNA_yibK_trmL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="SpoU_methylase" evidence="3">
        <location>
            <begin position="3"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1 2">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1 2">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1 2">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR029256-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="17220" checksum="796131CE8A1D7A6C" modified="2011-01-11" version="1">MPLHIVLVEPEIPANTGNIARTCAATGTHLHLVKPLGFRTDDATLKRAGLDYWYAVHIEYHESFAEVQEKYQAGRFFYATTKAKQQYSDIKFQDGDFLVFGKETKGLPPELLAANPDTCIKMPMSDKVRSLNLSNSAAIIVYEALRQLDFPGLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG07</accession>
    <name>E3EG07_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lig1</name>
        <name evidence="2" type="ORF">PPSC2_09760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370654.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22225"/>
    <dbReference type="EnsemblBacteria" id="ADO56040">
        <property type="protein sequence ID" value="ADO56040"/>
        <property type="gene ID" value="PPSC2_09760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2056"/>
    <dbReference type="eggNOG" id="ENOG5031TR8">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_391727_0_0_9"/>
    <dbReference type="OMA" id="RTAPFAQ"/>
    <dbReference type="OrthoDB" id="1446118at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="198"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="295"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="333"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="430"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="295"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="343"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="369"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="432"/>
            <end position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="708" mass="73416" checksum="4BD765626FCB3475" modified="2011-01-11" version="1">MNIGSVFRGLLGDVKAGEAKKLDMQPGQVVRGVVLKVSEDGDEAVLQIQGSQVRAKLETPLQPGQTATFQVQPASSSGMTVLKPLNDAANMPQQTVALTDVLESVGLPDTAQNRELIQAMQKNGVPLTSENAASLQEALSKQSGNVQLGTFVQAAAVAFQRGLPLTAESINGLRQTMFGPPLNDLLSSLEQELEAVLKQQGQGTPTDRSVGEATTIKSTDRTSVSPTGTSSVVIAEGQEGQALTLSKDASASAATKQAETGQQVTGGKELLKGTQAANLAATVSEASVLATDSDTSAGSTAFASNGTASEKPQAVSGRGATVVLDAGANAPESGAADALNGSRVKAEQQQQATAAGTQLKDADGAPTPATAESTGTKSALNAVTADRPSAQQAAGSTLPSATNNATVPEAPLQRLRLLLQELRAAVPPELSTAAPDQSSAEVTQPAAGASRTADATASQSAAPSMQLSPTEDPWVGRVLKLLGAEHEQQVHRSTAQLAQGAAARTEPPEGVLQTLPGLAATTDNSVTAAADTVKGALLQLMSSEDLPSALKEAAQQVVQHLTGQQLLLNTDRTAPFAQVHMFIPFIGPDGRETATIQIQSRRGKRGELDASNCRLWFDLDMKGLGPTLVDVQVVDRIVSLKLHNDQEWAASLLTSGRESIRTALESLGYQLLTLRTEPMPTRAEQSSPASSEVQSYVPQPYKGVDLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG10</accession>
    <name>E3EG10_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative NAD(P)H nitroreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_09775</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="3">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the nitroreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370657.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22240"/>
    <dbReference type="EnsemblBacteria" id="ADO56043">
        <property type="protein sequence ID" value="ADO56043"/>
        <property type="gene ID" value="PPSC2_09775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2059"/>
    <dbReference type="eggNOG" id="COG0778">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070764_5_1_9"/>
    <dbReference type="OMA" id="IPEWEQV"/>
    <dbReference type="OrthoDB" id="1847197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02135">
        <property type="entry name" value="YdjA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026021">
        <property type="entry name" value="YdjA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000232">
        <property type="entry name" value="YdjA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2 3" id="KW-0288">FMN</keyword>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="4">
        <location>
            <begin position="14"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="17"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="130"/>
            <end position="132"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR000232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000232-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="20810" checksum="D663225725C4E47F" modified="2011-01-11" version="1">MTKHTFSEHVIDVIQERRTIKRFKPDSIPVDTIKELLNVAVWAPNHKMREPWRFLLFAGEGRKKLAKAIAADIGKDNKFESGILHNPIQLLVVMEEDPRQAVWDEDLAAVSALVQNFMLAAWSKGIGTFWVTKPFLYSPKFRDCLGIQPGEKVIGMIYAGYPEVIPESRPRTPVADKLTLIDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG38</accession>
    <name>E3EG38_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Flagellar protein FliL</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fliL</name>
        <name evidence="9" type="ORF">PPSC2_09910</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Controls the rotational direction of flagella during chemotaxis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the FliL family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370684.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22380"/>
    <dbReference type="EnsemblBacteria" id="ADO56071">
        <property type="protein sequence ID" value="ADO56071"/>
        <property type="gene ID" value="PPSC2_09910"/>
    </dbReference>
    <dbReference type="GeneID" id="66577933"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2088"/>
    <dbReference type="eggNOG" id="COG1580">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_099018_8_0_9"/>
    <dbReference type="OMA" id="PQMTTNL"/>
    <dbReference type="OrthoDB" id="1817935at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005503">
        <property type="entry name" value="FliL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03748">
        <property type="entry name" value="FliL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="9" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="9" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="17063" checksum="1C49303852002DB3" modified="2011-01-11" version="1">MKKMLPWLITILLAITLIAGAAFVLIPALSGKKSEVIPNAQAAQAEQLPRLSADELVEVSSEITGIKTNLADADYIVQMNLAFQLNDAKAKEAFEKIKDISIKPIVIQLLADTKPDELRTAKGRDQFSDKLTDLINKSLPEGHLGNAKITDFLLAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGL2</accession>
    <name>E3EGL2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 15">Dihydrolipoyl dehydrogenase</fullName>
            <ecNumber evidence="3 15">1.8.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">lpdA</name>
        <name evidence="17" type="ORF">PPSC2_03400</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NAD(+) = (R)-N(6)-lipoyl-L-lysyl-[protein] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15045"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="1.8.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13 15">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="13 15">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="15">The active site is a redox-active disulfide bond.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.4" evidence="3 15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369288.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16195"/>
    <dbReference type="EnsemblBacteria" id="ADO54651">
        <property type="protein sequence ID" value="ADO54651"/>
        <property type="gene ID" value="PPSC2_03400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.661"/>
    <dbReference type="eggNOG" id="COG1249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016755_0_3_9"/>
    <dbReference type="OMA" id="RIAAYAM"/>
    <dbReference type="OrthoDB" id="267896at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004148">
        <property type="term" value="F:dihydrolipoyl dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006258">
        <property type="entry name" value="Lipoamide_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01350">
        <property type="entry name" value="lipoamide_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 13 15" id="KW-0274">FAD</keyword>
    <keyword evidence="5 15" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="9 13 15" id="KW-0520">NAD</keyword>
    <keyword evidence="13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11 15" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="16">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="12">
        <location>
            <position position="539"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="146"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="237"/>
            <end position="239"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="274"/>
            <end position="281"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="365"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="407"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="14">
        <location>
            <begin position="137"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO54651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="561" mass="60156" checksum="5109AD5E613C08BF" modified="2011-01-11" version="1">MEVKMSMIPGGKKGKASRNHVQLGQNVSFGDVLLEVETGKGVREITATVEGSISKIHFEEGDEVSSNQVLFTIDAAAEEGTSTVTSQATKMEQPTLDKNVDLLIIGAGPGGYVAAIYAAKKGIKVALVEKEELGGTCLNVGCIPTKSLVKSSEICHHIKESSLFGIHTGTDLQVDMKQVIRRKDEIKGKLISGIDYLMEKNNIEIIRGQAAFLSATQVSVKGQRHYQVTANDIIIATGSKITKVNIPGINLPIVMNSTDALASTELPKSITIIGGGVIGMEFAFIYRNFGVEVHVVEFMDRLLTMVDSDISEEIKQLAENAGIHIHTQSKVSKIQQADNGQAIVTYENKQGEHLLVSEKVLVAIGREPNLDGLDIEQAGIQRNERGKGIAVNEYMRTNVEHIYAIGDVTDIMQLAHVASHQGITAIDAIMGGSEGMHYAAIPNVIFTSPEIASVGILEDQCKREGMDFSVSKVSFSSNGKALTMNESEGFIKLIKDNVTQKIVGGSIIGPDASSLISSLTLAIANELTEQQITQTVFAHPTTGEVIHEAAFGLSIGALHQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGQ2</accession>
    <name>E3EGQ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvaO</name>
        <name evidence="2" type="ORF">PPSC2_05615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369769.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18520"/>
    <dbReference type="EnsemblBacteria" id="ADO55136">
        <property type="protein sequence ID" value="ADO55136"/>
        <property type="gene ID" value="PPSC2_05615"/>
    </dbReference>
    <dbReference type="GeneID" id="66573831"/>
    <dbReference type="KEGG" id="ppm:PPSC2_05615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1142"/>
    <dbReference type="eggNOG" id="COG1396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_4_0_9"/>
    <dbReference type="OMA" id="WSINQLA"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="10"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="17924" checksum="40923FD38124B41C" modified="2011-01-11" version="1">MEQPAFGTYLKQQREHKQLSINQLADAAGISNSQISRIENGLRGVPKPSTLRKIADALSVSYTEMMKAAGYWADDDSIEQNPHELYRSTVPEWANSKDRRDFKKMLEEDDELMFDGIPLDEKDRQRIKDVLTGLFWEAKQMNKHKKPADPGASKDQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHQ1</accession>
    <name>E3EHQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">YxaI1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yxaI1</name>
        <name evidence="7" type="ORF">PPSC2_11010</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370919.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2341"/>
    <dbReference type="EnsemblBacteria" id="ADO56313">
        <property type="protein sequence ID" value="ADO56313"/>
        <property type="gene ID" value="PPSC2_11010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2330"/>
    <dbReference type="eggNOG" id="COG1714">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053152_3_1_9"/>
    <dbReference type="OMA" id="SGRYWIK"/>
    <dbReference type="OrthoDB" id="1974702at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010432">
        <property type="entry name" value="RDD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06271">
        <property type="entry name" value="RDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="RDD" evidence="6">
        <location>
            <begin position="12"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="19323" checksum="E3753412269BBDCA" modified="2011-01-11" version="1">MTVTSDSVRKIYGGFWVRTAAFIIDLIILFAIVLLVGGTFSIIPVLLDIEETGFILEFFIWMPLILWLVLPWLYCGFLESSKVQATPGKLVFSLVVVNSKGNRLGFLHASGRYWIKVISFMLVHIIYIVVAFTAKKQGVHDLCAKTLVVNKKELQRHEQQSSLPPAASNIIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI18</accession>
    <name>E3EI18_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Bacitracin synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fusAA</name>
        <name evidence="11" type="ORF">PPSC2_12380</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56607.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043921404.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2638"/>
    <dbReference type="EnsemblBacteria" id="ADO56607">
        <property type="protein sequence ID" value="ADO56607"/>
        <property type="gene ID" value="PPSC2_12380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2626"/>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_222626_0_0_9"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="17"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010071">
        <property type="entry name" value="AA_adenyl_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010060">
        <property type="entry name" value="NRPS_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="17"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01720">
        <property type="entry name" value="NRPS-para261"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
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        <property type="entry name" value="RHODANESE_3"/>
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    </dbReference>
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    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="964"/>
            <end position="1038"/>
        </location>
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    <feature type="domain" description="Carrier" evidence="9">
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        <location>
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        </location>
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            <begin position="5115"/>
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        </location>
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    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="5638"/>
            <end position="5712"/>
        </location>
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    <feature type="domain" description="Carrier" evidence="9">
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            <begin position="2132"/>
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        </source>
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        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO56607.2"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="14083" mass="1584431" checksum="E92048AC8D47EB3D" modified="2015-05-27" version="2">[encoded data, 14083 characters]</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI22</accession>
    <name>E3EI22_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">YcbJ</fullName>
        </submittedName>
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        <name evidence="2" type="primary">ycbJ</name>
        <name evidence="2" type="ORF">PPSC2_03575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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            <taxon>Bacilli</taxon>
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        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
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    </reference>
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            <end position="271"/>
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            <dbReference type="Pfam" id="PF01636"/>
        </source>
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        <source>
            <dbReference type="EMBL" id="ADO54690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="316" mass="35843" checksum="DE51B6ACC20043D2" modified="2011-01-11" version="1">MTEKRPLTNSKDVSDILALAQSNGLHIRHEGLELNESGLDFRALFAKDVQGTPWVLRTPRRIDVVQSAAYEHKVLRLIRDTLPVAVPDWQVYSPEFIAYPQLEGTPAATIDMETKSYVWFINPDALTDRFVASLAKALAALHQTDHRRAADFGVRVKQHDEVRHLMGQRMEETQRVFGVSGELWQRWQAWLADDSYWPEYSALVHGDLHPGHILVSSNTEVTGMLDWTEAEVADPAIDFTSYYTLFGEVELARLLKFYKAAGGRVWPRMSEHIIELTAAYPVLIAEFALKSGLDEYMEMARNALGVHKQEEGLPDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
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                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
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            <topology evidence="5">Multi-pass membrane protein</topology>
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    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
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    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168975" evidence="6">
        <location>
            <begin position="20"/>
            <end position="275"/>
        </location>
    </feature>
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        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
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            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
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            <end position="125"/>
        </location>
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            <end position="160"/>
        </location>
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        </location>
    </feature>
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        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
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        <location>
            <begin position="69"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="30600" checksum="33DF611F9D0C9281" modified="2011-01-11" version="1">MRLKKANSLLITLMLCVGAVVSFFPIYMAVINSFKTQGEMFASFTALPTKLHFENYSQAFHQTHLLNSALNSTIISFIGIGGIVVCSALAGYKLSRTSGKLSSAIFFLFVASMLVPFHSIMIPLTRTAKDLSVQGSTYGLALIYIGLGVNMAIFLYHGFVKSIPRELEESAQMDGCNEFQTFFRIIFPLLLPITVTIAILDFLWIWNDFLLPLLMLTDVNHYTLILSTNMLFGEYNKDWSLILAALVLTSIPVILIYAFFQKFIMEGIAEGAVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI74</accession>
    <name>E3EI74_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Threonine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ycgF1</name>
        <name evidence="6" type="ORF">PPSC2_03805</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16620"/>
    <dbReference type="EnsemblBacteria" id="ADO54742">
        <property type="protein sequence ID" value="ADO54742"/>
        <property type="gene ID" value="PPSC2_03805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.752"/>
    <dbReference type="eggNOG" id="COG1280">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087840_1_0_9"/>
    <dbReference type="OMA" id="LAWDVTM"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="16"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="133"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="17570" checksum="7FFA555643391D63" modified="2011-01-11" version="1">MMLVYLGMIHLLNSPFVKAFLWLFGFFVLVYTGLESIKNAGVISESELRGNGNTLTNSFVAGFLMSLFNPLSILFWLGIYGSILANVANTYPVQQLLIYSGAIVLGVLAWDVTMAAASSVFRRFLKPGLLKTISWMSGLSLVGFGFYFGVQAFQLLFLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIJ1</accession>
    <name>E3EIJ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370256.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55629">
        <property type="protein sequence ID" value="ADO55629"/>
        <property type="gene ID" value="PPSC2_07845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1634"/>
    <dbReference type="eggNOG" id="ENOG503067Z">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2001574_0_0_9"/>
    <dbReference type="OrthoDB" id="2183857at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="15215" checksum="DD625BB59CA5535C" modified="2011-01-11" version="1">MLNISPEATGIRNDMQIILNTVERRNEYVSRIVNVNGESRFLLLHQMKDEYLQHDQLTDEKFMYLCAVNPVEALTLYFLQSIDIIMYWEWANANGTAEKAIQYKREEPLLPFIQVIERAEDESRGIVSGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIX9</accession>
    <name>E3EIX9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD(P)H dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_09565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370615.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22030"/>
    <dbReference type="EnsemblBacteria" id="ADO55998">
        <property type="protein sequence ID" value="ADO55998"/>
        <property type="gene ID" value="PPSC2_09565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2016"/>
    <dbReference type="eggNOG" id="COG2249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058643_1_0_9"/>
    <dbReference type="OMA" id="WFERVLV"/>
    <dbReference type="OrthoDB" id="1143659at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="21102" checksum="AC47B794F51A182B" modified="2011-01-11" version="1">MKHLIIYAHSNAESFNHAILETVVTTLKEKGDEVVVRDLYALDFQPVLKPEDTAAMRAGQTPADIKVEQEYISQSDTITFISPIWWTGLPAILKGYVDRVFAYGFAYTAGAEGINKLLTGKKGFIVNTHGTPNAIYDEIGMTAGLKLTSDTGIFDFVGIESVGHLLLGSIGYLDEDGYKGLLKQVQDTVKTVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ83</accession>
    <name>E3EJ83_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yuxG</name>
        <name evidence="2" type="ORF">PPSC2_11280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370975.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23635"/>
    <dbReference type="EnsemblBacteria" id="ADO56370">
        <property type="protein sequence ID" value="ADO56370"/>
        <property type="gene ID" value="PPSC2_11280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2387"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3347">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024866_0_0_9"/>
    <dbReference type="OMA" id="KHGLVTW"/>
    <dbReference type="OrthoDB" id="1356861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001303">
        <property type="entry name" value="Aldolase_II/adducin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013454">
        <property type="entry name" value="Bifunc_RhaD/ADH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00596">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SMART" id="SM01007">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02632">
        <property type="entry name" value="RhaD_aldol-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldolase_II" evidence="1">
        <location>
            <begin position="20"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="689" mass="75634" checksum="D345CECFE70CD859" modified="2011-01-11" version="1">MVQSLWNSSQASEQKSTLEQLVYRSNLIGTDRSVCNWGGGNTSAKTTIQDFRGREVEVMYVKGSGSDLATMKAHNFTGLRMEDIRPLFEREDMSDEDMVAYLANCMIDAKHPRASIETLLHAFLPFKHVDHTHPDAIISLCCAHNGKEIAKEIFGDRFVWVPYIRPGFKLSKMIAQGVLDHPQAELVLMEKHGLVTWGDTSEAAYAKTIEIIQEAESYIKAHQEEKQGFGGAKYKALTSEERRSIVSQVMPSVRGAVSDEKKMILTFDDAEDVLEFVNGLDSSALSQVGAACPDHLVHTKMKPLYVDWTPDIEDVEGLKVKLAEGIAAYKEQYQAYFERNRHEGDVRFEAAPRVILIPGVGMINTGKSWSNAQVSGALYHRAIAVMRGATALGEFVSLSENESYNVEYWPLELYKLSLAPAEAEFSRKIAFITGGAGGIGSATARRLVDEGAHVVLADLNLEGAQKIAADINSSYGENRAIAVKMDVTQEDQIQAAYAETALTYGGVDIIVNNAGLATSSPFDETSLKEWNLNVNVLGTGYFLVAREAFKLMKEQTLGGSMVFVGSKNSVYAGKNVTAYSSVKALEVHLARCIAAEGGEYGIRVNTILPDAILQGSAIWNSNWRNERAAAYGIEPDQLEEHYRKRTTLLVNIYPQDIAEGIAFFASSKAEKTTGCMLTIDGGVPAAFTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ91</accession>
    <name>E3EJ91_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">vanS</name>
        <name evidence="12" type="ORF">PPSC2_11315</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370983.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23670"/>
    <dbReference type="EnsemblBacteria" id="ADO56378">
        <property type="protein sequence ID" value="ADO56378"/>
        <property type="gene ID" value="PPSC2_11315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2394"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_3_9"/>
    <dbReference type="OMA" id="RRFEVWP"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
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    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="83"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="150"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="41981" checksum="0C08AA660E707875" modified="2011-01-11" version="1">MKAKRYDTLGWKLAALSLAAFTLTGLILMVFYYGASLLLWLNPSRSFFGTRLIRWTVNHIGSSLIMLVSGLPLYIYFFFLFTKNTIGYLREITKGMQKFADGNLSYSIPVSSADELATLAKNMNTMADKLRLSLEEERASAKAKNDLITGVSHDLRTPLTSVIGFLEYIETDRYRDEMELRYYVNIAYEKSLTLKKLIDELFEYTRVSGGSLPLELKPVDLGKLLTQLAEEFVPSLEQADMSYRVRIVEPVRILADTDELVRLYENLFSNAIRYGKDGKRFDITIGREGDEAIVICTNYGAPIPQEDVPHLFERFYRVDKSRSKETGGTGLGLAITKSITELHNGRISVRSSRRQTDFETRFPLYRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJP1</accession>
    <name>E3EJP1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
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        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO59639">
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        <property type="gene ID" value="PPSC2_26940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5696"/>
    <dbReference type="eggNOG" id="ENOG502ZKF5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2634782_0_0_9"/>
    <dbReference type="OrthoDB" id="2217455at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="9284" checksum="293FA3019189CA48" modified="2011-01-11" version="1">MSMYTLTDREVKKHFEQVYPIYKDYPSYSRKNEQPKCLVCQSEARITWECECGVNEGIFDEDDPQLSERQQAWKERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJP9</accession>
    <name>E3EJP9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO59647">
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        <property type="gene ID" value="PPSC2_26910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5688"/>
    <dbReference type="HOGENOM" id="CLU_2956319_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59647.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6852" checksum="3CF6291AB8048206" modified="2015-05-27" version="2">MARGWDGLEIGDRVKYETSENRFVVGEVIHLYVSDKSRARIKTDEGKEKDVICEYCEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJQ9</accession>
    <name>E3EJQ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59657.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59657">
        <property type="protein sequence ID" value="ADO59657"/>
        <property type="gene ID" value="PPSC2_26840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5673"/>
    <dbReference type="HOGENOM" id="CLU_2736281_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="71" mass="8045" checksum="F5C9BC142D1627CF" modified="2011-01-11" version="1">MVRIVYLNYGFLDMMFIEDEEREAIEQFWGIFGSPDTPRNTGGIRVLDVSQALNEKDLGGYQMGIVAKEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJR6</accession>
    <name>E3EJR6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386078.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0273"/>
    <dbReference type="EnsemblBacteria" id="ADO59664">
        <property type="protein sequence ID" value="ADO59664"/>
        <property type="gene ID" value="PPSC2_26800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5665"/>
    <dbReference type="eggNOG" id="COG0317">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_505116_0_0_9"/>
    <dbReference type="OrthoDB" id="1705284at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="539" mass="61125" checksum="238241CF61C455C9" modified="2011-01-11" version="1">MKLEKAINLATLVFAEKKDKQGRPLIFHPLRVAMGLTTEEEQVTAILLSAMQSSMFTKQMLFSVGISRQVAEALDDLMIRNEESLEKFAERIRCSDLAKKVEIAFLKDLKNEGLLDDQELKKCVKMLEILMEDKHENLKRVVVEHEQTQANSKTISESQLADFFLNYQMFVGVQLNKEQEEAVRLALTAKTCLIQGQTGEEIVQIIDVILKGLKKNTPYAHVGMVSGGTMSERECLKNQIHFEVEDIREADNLYFYDVIIVHAFSQVDPRQLIRMYGLFNPKTRIIFIDNTEQTAGENGVDISQFPMIPSVTLTKLLKSPEILSMDDKKLDRLRNVTAEQGDAALHNGDSQKLEFIELLTKLSNKPVANPLRDEVVESAIDNYEQARAIRLSTDQKNAIEQMLQNRVLLLTGAPGSGLTETVKGIVECTKHIDGESVIRLYGDTPYQSSYFYKRIGVSTFKLPSDLDSDGMVDLYIIDSPEEMNKEDLIRLVSHLEDLDYDSRVLIVGNPHAMRDYGFDVQAMASSFPVMELKKLRYQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJT0</accession>
    <name>E3EJT0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386092.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0287"/>
    <dbReference type="EnsemblBacteria" id="ADO59678">
        <property type="protein sequence ID" value="ADO59678"/>
        <property type="gene ID" value="PPSC2_26720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5648"/>
    <dbReference type="eggNOG" id="ENOG5033K9H">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2056580_0_0_9"/>
    <dbReference type="OMA" id="INHEKTI"/>
    <dbReference type="OrthoDB" id="1959453at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="14030" checksum="E696EBCBB7C75EE9" modified="2011-01-11" version="1">MINEMNRFLEIVKDISPKSFINEKNELIVLPKNNIYMLLNDVQNELDVKCKVIAWLSRPSCKGISPYWQKRMLAIVNTYLGTSFTKDQMSHIYTYLGNDCNRKLCIDFIESGYDLSLLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJX3</accession>
    <name>E3EJX3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386406.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0603"/>
    <dbReference type="EnsemblBacteria" id="ADO59992">
        <property type="protein sequence ID" value="ADO59992"/>
        <property type="gene ID" value="PPSC2_28225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5985"/>
    <dbReference type="HOGENOM" id="CLU_2701345_0_0_9"/>
    <dbReference type="OrthoDB" id="2207327at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="73" mass="8329" checksum="0C920816E81B868C" modified="2011-01-11" version="1">MSSKPKTKTYIVHHRGQVIHGGYTVLGRYKIGARNEKEAKQFLREKVGKHTKVKVYYEDKNSVVSHGSVVKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKV0</accession>
    <name>E3EKV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ATP-dependent protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_27340</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="8 9">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
            <plasmid evidence="8 9">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the ClpX chaperone family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0158"/>
    <dbReference type="EnsemblBacteria" id="ADO59551">
        <property type="protein sequence ID" value="ADO59551"/>
        <property type="gene ID" value="PPSC2_27340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5786"/>
    <dbReference type="eggNOG" id="COG1219">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014218_8_2_9"/>
    <dbReference type="OrthoDB" id="718259at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004487">
        <property type="entry name" value="Clp_protease_ATP-bd_su_ClpX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010603">
        <property type="entry name" value="Znf_CppX_C4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038366">
        <property type="entry name" value="Znf_CppX_C4_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06689">
        <property type="entry name" value="zf-C4_ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00994">
        <property type="entry name" value="zf-C4_ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00382">
        <property type="entry name" value="clpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51902">
        <property type="entry name" value="CLPX_ZB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0143">Chaperone</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0614">Plasmid</keyword>
    <keyword evidence="8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ClpX-type ZB" evidence="7">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="5"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="395" mass="43860" checksum="5C8A1CBD60EDFAA3" modified="2011-01-11" version="1">MEKRCSFCGRLESPQLPVIEGASALICKECAETCVEEMQAPLNTPSKQGLKPHEIKEELDRFVIGQDEAKKLLSVAVYNHYKRIHMKTKVDIQKSNIMIVGPTGSGKTYLLETLSRILDVPLVIADATSLTQAGYVGDDVETILEKLIIKAGGDVQKAEQGIVYIDEIDKIASYEVDGRKRTKDIAGQAVQESLLKMIEGNEVHLQMGNQRLNKQRVILNTKNILFIFGGAFVGLQDILQSRTKGVTKTVGFTTPAIPTDDIQDQELSQQDLVSYGFIPEFMGRIPVIAVLNPLRKEDLMSILVKPKNAVLKQYQALLQMDGVKLSFHAKAVEHIAEEAMKKNVGARGLKGIVEKRMYDLMYSLPQKEEIKSLIITKEMLLGEAPMIPVEKKIAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL76</accession>
    <name>E3EL76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386322.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0519"/>
    <dbReference type="EnsemblBacteria" id="ADO59908">
        <property type="protein sequence ID" value="ADO59908"/>
        <property type="gene ID" value="PPSC2_28625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6075"/>
    <dbReference type="HOGENOM" id="CLU_1393922_0_0_9"/>
    <dbReference type="OMA" id="NVENYWI"/>
    <dbReference type="OrthoDB" id="1379602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="21570" checksum="D27E35ECAD11AC48" modified="2011-01-11" version="1">MDKEIGSILHALSNAFVNESDSKHADWIRRIKEDYSHLDLKKPETFSLLLSTTIKDQARALMRHVLPTLAPSDMDSKLKHNIEFAFLQYEFITRHLKSVILKVEGYGCSTDKTRWLIDSYVKHLLTGELPSIEEREYWHPACGEITDWLDWIDSMNDLYCGDFERYALAKTKIISSYVKVAREKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELD6</accession>
    <name>E3ELD6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386382.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0579"/>
    <dbReference type="EnsemblBacteria" id="ADO59968">
        <property type="protein sequence ID" value="ADO59968"/>
        <property type="gene ID" value="PPSC2_28340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6011"/>
    <dbReference type="HOGENOM" id="CLU_1775635_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="17648" checksum="C5F2F4DBC66EEB81" modified="2011-01-11" version="1">MKTEKYKSYKYFHFEDVFVEIIIANNYSFKEAKRIAKAETKAILKNDFIYLIFDNRYSIIKNDDRKLYEFEVCTKKLPPPININEMTCDQKKELILYDEYMCGPDDYQIVSWSITEAYENLKSLYPHMTHFDLSSLRYRIEKENSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBT7</accession>
    <name>A0A0D5ZBT7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44240">
        <property type="protein sequence ID" value="AKA44240"/>
        <property type="gene ID" value="PPSC2_12220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12220"/>
    <dbReference type="HOGENOM" id="CLU_2918385_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="7406" checksum="D760136DD58ED676" modified="2015-05-27" version="1">MKNRKPSIKYNFPTDYDVMSIVRRQKRKPINKCCKGKNPFFKYDSSYFFKSYHGAIKKKTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC68</accession>
    <name>A0A0D5ZC68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YabK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yabK</name>
        <name evidence="1" type="ORF">PPSC2_00205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599341.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13220"/>
    <dbReference type="EnsemblBacteria" id="AKA44169">
        <property type="protein sequence ID" value="AKA44169"/>
        <property type="gene ID" value="PPSC2_00205"/>
    </dbReference>
    <dbReference type="GeneID" id="66574924"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.40"/>
    <dbReference type="HOGENOM" id="CLU_184983_0_0_9"/>
    <dbReference type="OrthoDB" id="2044609at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010468">
        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020115">
        <property type="entry name" value="Fin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10955">
        <property type="entry name" value="DUF2757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="76" mass="8528" checksum="FBD69A66EDB157FF" modified="2015-05-27" version="1">MVVNYVCRHCRTFLGRIDSAVITEERLGFHSLTPAERRDIIAYNSGGEVTVKVICEHCSQALENNPELSLLVNPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCD6</accession>
    <name>A0A0D5ZCD6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885938.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44231">
        <property type="protein sequence ID" value="AKA44231"/>
        <property type="gene ID" value="PPSC2_10830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2294"/>
    <dbReference type="HOGENOM" id="CLU_2956315_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6884" checksum="0562C8B763E25832" modified="2015-05-27" version="1">MQKSLRTMPKHYMRRPSSYYPPNVKRSDFKVVTSGAVDLNLEKQNVRLCHGILTFSFPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCH6</accession>
    <name>A0A0D5ZCH6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44279">
        <property type="protein sequence ID" value="AKA44279"/>
        <property type="gene ID" value="PPSC2_16165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3452"/>
    <dbReference type="HOGENOM" id="CLU_148608_1_0_9"/>
    <dbReference type="OrthoDB" id="1803168at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="15800" checksum="0F192B19143D0D77" modified="2015-05-27" version="1">MVGVRIIERVVYMKIGPKVYWRKTSGEVIFMTPQIESESARETTKEDDMGFYPQLKGYDPEQVDVLKLEFDKYTEDFYHATSYRVNPDTKTMEFTYPSNSGSDSPPTKPLTDQVAELKTRQDSTEAAMLALMDTTTTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCH9</accession>
    <name>A0A0D5ZCH9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324539.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44281">
        <property type="protein sequence ID" value="AKA44281"/>
        <property type="gene ID" value="PPSC2_16320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3484"/>
    <dbReference type="HOGENOM" id="CLU_1538575_0_0_9"/>
    <dbReference type="OrthoDB" id="841869at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5002300514" evidence="1">
        <location>
            <begin position="46"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="170" mass="17980" checksum="1719B3A75C9BC0AC" modified="2015-05-27" version="1">MEKSRMTPFFAVLPLAAVLSLTGCTSSVISSISSATIDSAPVVQAANESTEVNTPKPGDHVIAPKDTNKVLNKSLGNTDMSERFYIDPGYGYARVYVYNDGDAPFNITVTQGSASGPVKMKGKIKPGKVFDEINESTWPVGSFYVNLTSPGGVMKGGLSVRIANAKGELQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCN6</accession>
    <name>A0A0D5ZCN6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">TnpA7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tnpA7</name>
        <name evidence="7" type="ORF">PPSC2_22110</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transposase 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44317">
        <property type="protein sequence ID" value="AKA44317"/>
        <property type="gene ID" value="PPSC2_22110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4707"/>
    <dbReference type="HOGENOM" id="CLU_209787_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002513">
        <property type="entry name" value="Tn3_Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01526">
        <property type="entry name" value="DDE_Tnp_Tn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0814">Transposable element</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="DDE_Tnp_Tn3" evidence="6">
        <location>
            <begin position="2"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="AKA44317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="6910" checksum="530086F885A30A43" modified="2015-05-27" version="1">MSDQFSIFFTKVINTNTRDTVHVIDGLLHHETDLAIEVHYTDTADYTNQVFGLTHLLGFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E483</accession>
    <name>E3E483_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12465</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56623.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2654"/>
    <dbReference type="EnsemblBacteria" id="ADO56623">
        <property type="protein sequence ID" value="ADO56623"/>
        <property type="gene ID" value="PPSC2_12465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2643"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2094436_0_0_9"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56623.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="12723" checksum="34B6689E8AC23AA2" modified="2015-05-27" version="2">MNLLFKDSRFIRFFASRTSANIADSIYSIVLLYFVQQSTQSVVMPSFTYTAVSAASIFSFLGGPLVDRYSPPLLASIALFTQAVLILAVPFLIQGGMANLIAILVIVFIASCCRNW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4A7</accession>
    <name>E3E4A7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gerAB3</name>
        <name evidence="7" type="ORF">PPSC2_12585</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371251.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2679"/>
    <dbReference type="EnsemblBacteria" id="ADO56647">
        <property type="protein sequence ID" value="ADO56647"/>
        <property type="gene ID" value="PPSC2_12585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2671"/>
    <dbReference type="eggNOG" id="COG0814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_743258_0_0_9"/>
    <dbReference type="OMA" id="TNRHDIN"/>
    <dbReference type="OrthoDB" id="819342at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="39"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="144"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="224"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="273"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="312"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="341"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="373" mass="42938" checksum="50C3D14ADD652C00" modified="2011-01-11" version="1">MSAFTLFGKKETLGNLYAGLLINRLQMLYYFFIMPMYLAHFYMLWVILGLGLLSQLMLWMLCKWLTSPWATRGLEGFKELFGPKTVRLLAAVGLIPLFLKTSVIVLGYSGIVHEYIFPVMNRTVPLIAILLMSCYLASNGMERALRFIVIAFFGTIWLTLCYLPFYFPPVADYKQLYPLIPLHPPLDSWRGIVICWSALSGPEYLIFLVPWLKPDRKTIKHLTIANLFTILEYLLLFVATVLYYGHEYLKTAGYPVINMISYLQSPIFERIEILLISFFMFNVVFAVSLFLLMFYGALQITAGKTLEKNSRFGYLASCFLMGTLLVIANEKLWKADTLQNLWPGFFMYSEAATFLLVPILLLIAMRRKGNTYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4T3</accession>
    <name>E3E4T3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transmembrane anti-sigma factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_14525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371659.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02180"/>
    <dbReference type="EnsemblBacteria" id="ADO57061">
        <property type="protein sequence ID" value="ADO57061"/>
        <property type="gene ID" value="PPSC2_14525"/>
    </dbReference>
    <dbReference type="GeneID" id="66577074"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3099"/>
    <dbReference type="eggNOG" id="COG5662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1365098_0_0_9"/>
    <dbReference type="OMA" id="PTYPQYW"/>
    <dbReference type="OrthoDB" id="2000212at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="181"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="23667" checksum="5AD2296CE0EC89A4" modified="2011-01-11" version="1">MKSRDAEDLFATGKNVSKQDSERRRAKSSSAGWEHGSEENDWNLSKESRSAIRDISFEITDDKLEAMNRRVMDRIYEESPWLVPGEHRRARVNPAARKYMSVWIAGFLAVFLCSFLFLNWNGSSSQENPPQAAPVMDTGILPTGLLETTSTSPQYQYHIKDVNSGIMDPLVASIVPTYPQYWMLLSVLALALALFSLGWIHRTRRVRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5C7</accession>
    <name>E3E5C7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Isoleucine--tRNA ligase</fullName>
            <ecNumber evidence="10">6.1.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Isoleucyl-tRNA synthetase</fullName>
            <shortName evidence="10">IleRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ileS</name>
        <name evidence="14" type="synonym">ILS1</name>
        <name evidence="14" type="ORF">PPSC2_16525</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10">Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile)</text>
            <dbReference type="Rhea" id="RHEA:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:9666"/>
            <dbReference type="Rhea" id="RHEA-COMP:9695"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78528"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="10">IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.5" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372073.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03860"/>
    <dbReference type="EnsemblBacteria" id="ADO57487">
        <property type="protein sequence ID" value="ADO57487"/>
        <property type="gene ID" value="PPSC2_16525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3528"/>
    <dbReference type="eggNOG" id="COG0060">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001493_1_1_9"/>
    <dbReference type="OMA" id="KMMAPFT"/>
    <dbReference type="OrthoDB" id="32262at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004822">
        <property type="term" value="F:isoleucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006428">
        <property type="term" value="P:isoleucyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07961">
        <property type="entry name" value="Anticodon_Ia_Ile_ABEc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02003">
        <property type="entry name" value="Ile_tRNA_synth_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033709">
        <property type="entry name" value="Anticodon_Ile_ABEc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002301">
        <property type="entry name" value="Ile-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023586">
        <property type="entry name" value="Ile-tRNA-ligase_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42780">
        <property type="entry name" value="PTHR42780"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00984">
        <property type="entry name" value="TRNASYNTHILE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="SSF50677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00392">
        <property type="entry name" value="ileS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10 11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 10 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 10 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 10 11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="tRNA-synt_1" evidence="12">
        <location>
            <begin position="17"/>
            <end position="618"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_1" evidence="13">
        <location>
            <begin position="675"/>
            <end position="820"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="10">
        <location>
            <begin position="47"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="10">
        <location>
            <begin position="589"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="592"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO57487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1029" mass="116807" checksum="4837938E0D50ECAF" modified="2011-01-11" version="1">MNRVDVKEKARSRDLRILSKWKQEDTFRKSITNREGKPNFVFYEGPPTANGKPHIGHVLGRVIKDFVGRYQTMKGYRVVRKAGWDTHGLPVELGVQKQLGISHKPEIEEYGVEKFIKKCKASVFEYEQQWRDLTEAIGYWTDLDHPYITLDNNYIESVWNILATIHEKDLLYRGHRVSPYCPDCQTTLSSHEVAQGYKDVKDLSATAKFKLHSSGEYVLAWTTTPWTLPSHVALAVNPELEYARVKQEDGVYIVAKNLVETVIKGDHEVIGTLSGSELVGQTYTPPFTYFQVEKGNQILGAKFVTDSSGTGIVHMAPAHGEDDYRVCRENGVGFINVVDLQGNYVAEITDFAGRFVKDCDVDIVKMLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYAMDSWFIKTTAIKDQLIANNSEVEWYPGHVREGRFGKFLEELVDWNISRDRYWGTPLNIWVCEETGEQFAPHSIAELRERAIGDVPADIEIHKPYVDDIKVRSQCGKYEMTRTPEVIDVWFDSGSMPFAQHHYPFENNETFEQQFPADMICEGIDQTRGWFYSLLAVSTMLTGKAPYKAVMATGHVLDEQGQKMSKSKGNVIDPWEVIDEYGTDAFRWALLSDSAPWNSKRFSKGIVGEAKSKLVDTLVNTHAFLTLYADIDGFDPARYPFKPSAHKLDRWILSRLNSLILVVDKALSVNDFLNSSKAIESFVDELSNWYIRRSRDRFWGNGLTEDKLDAYRTLTEVLLTTAKLLAPFTPLLAEDIYLNLSNGESVHLDDYPSANESLIDLELERDMETARRVVELARNVRNETGLKTRQPLSELILSMDQDFDLSGYEEIIKDEINVKHIHVETDDSGFVDFTLKLNLKVAGKKYGKNVGFLQNLFKGMSAEDTRSVVEKGVLNVASPEGEELQVTAEELLVEKKAKEGFASASGYGLTVALNTDITPELEQEGWVREVVRAVQDYRKKLDLPIEKYVALTLDVDSDLRQAIESFDSVLRENVLVTTVAFGQAEPAEHVEVNGKTIGVHIGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F9</accession>
    <name>E3E5F9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yvaQ</name>
        <name evidence="9" type="ORF">PPSC2_17410</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
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        <property type="protein sequence ID" value="ADO57678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04750"/>
    <dbReference type="EnsemblBacteria" id="ADO57678">
        <property type="protein sequence ID" value="ADO57678"/>
        <property type="gene ID" value="PPSC2_17410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3719"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_27_9"/>
    <dbReference type="OMA" id="QQSAMAH"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="167"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="192"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="7">
        <location>
            <begin position="264"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="506"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="342"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="554" mass="61269" checksum="689591700E019741" modified="2011-01-11" version="1">MKLQGKLVLNAMISLIACLALVAYIIFELLRINAQSSNLVPAMLNVQQLNAYLIQSGQALQNYSTSMTESNKADVQNQLTQSEKTITLLSQGMMQTEAQQKRLDTIKTKFNQLKAATEKAMSAQNSPESKREAMRAQGIQNDVFMLDLLTKARYDQYTEELTKSIRFTWQLALTGAVLLLVAVGLYNTYTSRQLALRTRKLTDAAKQIAEGNLTVQLPQTKGRDELDELNESFRVMIGNLRSIVLSIDQAGNRVDLMARDIDQHNEAMKEIVTQVSTSTEELAIGSQKIAEDLSSTVGVVDDMQQKFESNLLETTQSTAYSEDALRVIEQGARVMSDQMRIVAENRSAMSEVEQTVRELESNAAEITTMTGYVSEIASQTSLLSLNASIEAARAGEAGKGFAVVANEVKKLASQSESAVKKIYTAVEGITQAMDKVKASVEQSQELFREQEKATSSTGESFREISGKVQQIAGQVSKLSTDMNVSRELSVQVQQAIENISAITQQSAAGSEEITASTVEQKRSFEESAEKVKELRQIREEMQRELNRFQVEKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5G3</accession>
    <name>E3E5G3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_17425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372263.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3727"/>
    <dbReference type="EnsemblBacteria" id="ADO57682">
        <property type="protein sequence ID" value="ADO57682"/>
        <property type="gene ID" value="PPSC2_17425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3723"/>
    <dbReference type="eggNOG" id="COG1787">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_101688_0_1_9"/>
    <dbReference type="OMA" id="MRYYAAD"/>
    <dbReference type="OrthoDB" id="1999861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007560">
        <property type="entry name" value="Restrct_endonuc_IV_Mrr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04471">
        <property type="entry name" value="Mrr_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Mrr_cat" evidence="2">
        <location>
            <begin position="57"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="198" mass="22668" checksum="5B7C22ED69E915E3" modified="2011-01-11" version="1">MLLEQLSAYKELGIGLIVLLLLLVLTIRGMVRDRRNRILRDLDPRKIGIQDIDRMEDGSEFELYLQRLLSALGYKDIYKTTSSRDFGADLVFTDREGARVVIQAKRYAVQHPVGLGAVQEIYTSMRYYAADKSVVITSGRYTESCKTLAAVNGVKLLDRNDLVDMIDLFKAKRREEVMERIESRAEVVASKWWSKSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W6</accession>
    <name>E3E5W6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07035"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58185">
        <property type="protein sequence ID" value="ADO58185"/>
        <property type="gene ID" value="PPSC2_19815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4223"/>
    <dbReference type="eggNOG" id="COG0463">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023736_0_0_9"/>
    <dbReference type="OMA" id="EDRITAC"/>
    <dbReference type="OrthoDB" id="1379602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="9"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="371" mass="43473" checksum="7B552D6194B3FEAA" modified="2011-01-11" version="1">MTEHPMTISLCMIVKNEEQILARCLDSVADLMDEIIIVDTGSTDQTKTIAARYTDRIYTFEWMDDFAAARNESFDKATCSYIMWLDADDVLLEPDRERLRSLKQRLSKHIDAVVMPLHLAEGEQGELLFTSRRIRLVKRDQQYRWEGRLHEDLVIPQGQIVHSDVAVTHRRMQDHTLRNQRILARWISESGKLEGRLLYFHANECFDRKEYAEAAEAFDHLLEEPSGYREDRITACARSAECYLHLGKPEQQLDRLLRSFRYGVPQADLCCMIGDWFFTRNEWNTAAYWYERATEQQHHLPGMRPVPLPCYSWLPHVRLSHCFAHMGKLEASYEHNQAALRYLPDDPHLLDNERKLRKVIPNHSSTARSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Z7</accession>
    <name>E3E5Z7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-alanyl carrier protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_19960</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372788.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07180"/>
    <dbReference type="EnsemblBacteria" id="ADO58216">
        <property type="protein sequence ID" value="ADO58216"/>
        <property type="gene ID" value="PPSC2_19960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4253"/>
    <dbReference type="eggNOG" id="COG0236">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108696_10_1_9"/>
    <dbReference type="OMA" id="QSQVIEM"/>
    <dbReference type="OrthoDB" id="1943389at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="2">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="1">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10291" checksum="4D7CD8EFDA20748E" modified="2011-01-11" version="1">MQSQVIEMISAVKEDPELVAKLNGHSDIIHDAGLDSLQLVHFMLQVEDAFDVEIDFDSFELEHLRSVDAFCSYIQGISDAEQVSHPEGMETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E654</accession>
    <name>E3E654_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PPSC2_12990</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371343.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00680"/>
    <dbReference type="EnsemblBacteria" id="ADO56739">
        <property type="protein sequence ID" value="ADO56739"/>
        <property type="gene ID" value="PPSC2_12990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2767"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120964_3_3_9"/>
    <dbReference type="OMA" id="MPLKYIW"/>
    <dbReference type="OrthoDB" id="1709780at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023845">
        <property type="entry name" value="DUF3817_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12823">
        <property type="entry name" value="DUF3817"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03954">
        <property type="entry name" value="integ_memb_HG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3817" evidence="8">
        <location>
            <begin position="7"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF12823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="11813" checksum="77055EB83287011C" modified="2011-01-11" version="1">MFKNAFKTFGAIGNIEAISYLLLVCIAMPLKYAAGMPQMVSWVGMIHGVLFVAYVVATIVMLILRKITLLQGLAALIASLLPFGPFIFDRKVLKKAEARASHASSIKAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>E3E678</accession>
    <name>E3E678_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YdcN3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ydcN3</name>
        <name evidence="1" type="ORF">PPSC2_13110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2797"/>
    <dbReference type="EnsemblBacteria" id="ADO56763">
        <property type="protein sequence ID" value="ADO56763"/>
        <property type="gene ID" value="PPSC2_13110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2791"/>
    <dbReference type="HOGENOM" id="CLU_1863216_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15728" checksum="CEF57507FE3FC6D4" modified="2011-01-11" version="1">MFPQGEALRYFTVDGDVLSLVEVKDDFPMVTYQGYVGAPFDKTFTMEYDPLDLFLENKAKNQWGTYPKFNKPLIYEYTTGWGDSSTTFYGRVTIDKKEELLGMTGDPVTVLSANAKKIMKTFKLPWESRTDTQQAME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3E691</accession>
    <name>E3E691_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Biotin synthase</fullName>
            <ecNumber evidence="3 13">2.8.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">bioB</name>
        <name evidence="16" type="synonym">bioB1</name>
        <name evidence="16" type="ORF">PPSC2_13175</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12 13">
            <text>(4R,5S)-dethiobiotin + [sulfur carrier]-SH + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2 5'-deoxyadenosine + [sulfur carrier]-H + biotin + 2 L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:22060"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57586"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="ChEBI" id="CHEBI:149473"/>
            <dbReference type="EC" id="2.8.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13 14">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="13 14">Binds 1 [2Fe-2S] cluster. The cluster is coordinated with 3 cysteines and 1 arginine.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13 14">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="13 14">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 13">Cofactor biosynthesis; biotin biosynthesis; biotin from 7,8-diaminononanoate: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the radical SAM superfamily. Biotin synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.6" evidence="3 13"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371380.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00850"/>
    <dbReference type="EnsemblBacteria" id="ADO56776">
        <property type="protein sequence ID" value="ADO56776"/>
        <property type="gene ID" value="PPSC2_13175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2804"/>
    <dbReference type="eggNOG" id="COG0502">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033172_2_1_9"/>
    <dbReference type="OMA" id="ADRFCMG"/>
    <dbReference type="OrthoDB" id="940969at2"/>
    <dbReference type="UniPathway" id="UPA00078">
        <property type="reaction ID" value="UER00162"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004076">
        <property type="term" value="F:biotin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009102">
        <property type="term" value="P:biotin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01694">
        <property type="entry name" value="BioB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010722">
        <property type="entry name" value="BATS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002684">
        <property type="entry name" value="Biotin_synth/BioAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024177">
        <property type="entry name" value="Biotin_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22976">
        <property type="entry name" value="PTHR22976"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06968">
        <property type="entry name" value="BATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001619">
        <property type="entry name" value="Biotin_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00876">
        <property type="entry name" value="BATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00433">
        <property type="entry name" value="bioB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13 14" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="4 13 14" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9 13" id="KW-0093">Biotin biosynthesis</keyword>
    <keyword evidence="10 13 14" id="KW-0408">Iron</keyword>
    <keyword evidence="11 13 14" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 13 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13 14" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="15">
        <location>
            <begin position="53"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <position position="207"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR001619-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO56776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="36686" checksum="3752E82E7153BE3F" modified="2011-01-11" version="1">MNLFNKDVDWGRLAEKAIHFSNLTLEEGTGVLEADDAEILPIMQAAFQVRHHFYGKKVKLNMIMNAKSGLCPEDCSYCSQSIVSTAPVSKYSMLDKESLLAGAREAVARKAGTYCIVASGKGPTDRELDQVIDAVQEITRTMPLKICACLGILKGDQARRLADAGVHRYNHNLNTSKANYPSITTTHTYDQRVETVKMAQSHGMSPCSGVIIGMGETNEEIVQMAYALRELDADSIPINFLNPVPGTPLGEAQRISPIQALKVLALFRFICPSKEIRVAGGRELNLRSLQPLSLYAANSIFVGDYLTTEGQEVTADHQMIEDLGFEIEMCALSAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D8</accession>
    <name>E3E6D8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Butanol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yugJ</name>
        <name evidence="4" type="ORF">PPSC2_18900</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372584.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06110"/>
    <dbReference type="EnsemblBacteria" id="ADO58007">
        <property type="protein sequence ID" value="ADO58007"/>
        <property type="gene ID" value="PPSC2_18900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4051"/>
    <dbReference type="eggNOG" id="COG1979">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007207_0_4_9"/>
    <dbReference type="OMA" id="CTMALNG"/>
    <dbReference type="OrthoDB" id="717704at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990362">
        <property type="term" value="F:butanol dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08187">
        <property type="entry name" value="BDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044731">
        <property type="entry name" value="BDH-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43633">
        <property type="entry name" value="PTHR43633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00913">
        <property type="entry name" value="ADH_IRON_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00060">
        <property type="entry name" value="ADH_IRON_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-ADH" evidence="3">
        <location>
            <begin position="9"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="387" mass="42390" checksum="BB80FF3A76920D7E" modified="2011-01-11" version="1">MKAFEFYNPTQLIFGKGQLEALKREVPKYGKRVLLVYGGGSIKRSGLYDNVIKLLGEIGAEVTELAGVEPNPRLSTVHKGVELCKTNQIDLVLAVGGGSVLDCSKAIAVGAKYDGDMWDFAERKSAPQAALPLGTVLTMAATGSEMNAGSVITNEKTQEKLGWGSVHAFPAFSILDPVNTYSLPQNQTVYGIVDMMSHTLEHYFHLESNTPVQLGWCETILRTVIDAAPGLVNDLENYELRETIMYCGTMALNGFLNMGLTGDWATHNIEHAVSAVYDIPHGGGLAILFPNWMKHNLHVKPERFKQLAVNVFHVNPEGKSDEEVALEGIQALRDFWNSIGAPSRLADYDIDASKIDVMADKAVKFGPFGGFNKLNREDVVEIYRASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E6</accession>
    <name>E3E6E6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Haloacid dehalogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gph3</name>
        <name evidence="1" type="ORF">PPSC2_18935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372592.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06145"/>
    <dbReference type="EnsemblBacteria" id="ADO58015">
        <property type="protein sequence ID" value="ADO58015"/>
        <property type="gene ID" value="PPSC2_18935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4058"/>
    <dbReference type="eggNOG" id="COG0546">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_16_1_9"/>
    <dbReference type="OMA" id="GDNNHDL"/>
    <dbReference type="OrthoDB" id="1562270at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="256" mass="28109" checksum="07ABE7C5B90C64D7" modified="2011-01-11" version="1">MSELIVQGKRYPCRGILFDKDGTLLDFIQLWGPWARSILDMMEQHLVVAGAGFTMEKGNVLGTVHDREGHVIGYDPSGPLAMGTVDESTGVLAWQLYTAGVPWNEAVRLVREFNKTAMADVRRHRAAKVFPGLRTLLEQSRHAGMKLAVVTSDSTEAAQEHLEWMGLTSYFDEIIGHDRVTYGKPDPEMAETACALLGLSPADVVVIGDSNGDMQMGKRAGVRLAIGFAPASERSSHLLDADKVVRGYEELEVRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Z5</accession>
    <name>E3E6Z5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methionine aminopeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">map7</name>
        <name evidence="2" type="ORF">PPSC2_22325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58697.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324745.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09790"/>
    <dbReference type="EnsemblBacteria" id="ADO58697">
        <property type="protein sequence ID" value="ADO58697"/>
        <property type="gene ID" value="PPSC2_22325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4734"/>
    <dbReference type="eggNOG" id="COG0024">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1642066_0_0_9"/>
    <dbReference type="OrthoDB" id="1285136at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="13"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58697.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="19713" checksum="A739CFDD005C19AD" modified="2015-05-27" version="2">MIICKSGTESSFMRKARKMNSATNHFLAGHIEPGITTGELDHLADRYIRSQGAVPSFKGYNGFPASICASVNEQLVHGFPGKRKLNKGDVLTKTRQFTMSHAIRQYIENPNRGISEQGPRLKTGIVLAIESMIPIGTHLVGTLEDNWTVVTMNVISCAPYEQLVTDEADDMDIFTKLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E708</accession>
    <name>E3E708_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">50S ribosomal protein L14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">rplN</name>
        <name evidence="8" type="ORF">PPSC2_22385</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 7">Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the universal ribosomal protein uL14 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432573.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09850"/>
    <dbReference type="EnsemblBacteria" id="ADO58710">
        <property type="protein sequence ID" value="ADO58710"/>
        <property type="gene ID" value="PPSC2_22385"/>
    </dbReference>
    <dbReference type="GeneID" id="66575590"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4746"/>
    <dbReference type="eggNOG" id="COG0093">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_095071_2_1_9"/>
    <dbReference type="OMA" id="AKEVLCI"/>
    <dbReference type="OrthoDB" id="1799923at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01367">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036853">
        <property type="entry name" value="Ribosomal_L14_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000218">
        <property type="entry name" value="Ribosomal_L14P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005745">
        <property type="entry name" value="Ribosomal_L14P_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019972">
        <property type="entry name" value="Ribosomal_L14P_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761">
        <property type="entry name" value="PTHR11761"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00238">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01374">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50193">
        <property type="entry name" value="SSF50193"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01067">
        <property type="entry name" value="rplN_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00049">
        <property type="entry name" value="RIBOSOMAL_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2 5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 5 7" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="13284" checksum="1414F23681D82F49" modified="2011-01-11" version="1">MIQPFTRLTVADNSGAKELMCIRVLGGTGRRTAQIGDLIVCSVKQATPGGVVKKGDVVRAVVVRTKRSIRRKDGSYIGFDENAAVVVKEDKSPRGTRIFGPVARELRDKDFMKIVSLAPEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7E6</accession>
    <name>E3E7E6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Xylan alpha-1,2-glucuronidase</fullName>
            <ecNumber evidence="9">3.2.1.131</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">aguA</name>
        <name evidence="13" type="ORF">PPSC2_24465</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>Hydrolysis of (1-&gt;2)-alpha-D-(4-O-methyl)glucuronosyl links in the main chain of hardwood xylans.</text>
            <dbReference type="EC" id="3.2.1.131"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 9">Belongs to the glycosyl hydrolase 67 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.131" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373691.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11955"/>
    <dbReference type="CAZy" id="GH67">
        <property type="family name" value="Glycoside Hydrolase Family 67"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59157">
        <property type="protein sequence ID" value="ADO59157"/>
        <property type="gene ID" value="PPSC2_24465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5181"/>
    <dbReference type="eggNOG" id="COG3661">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007125_1_0_9"/>
    <dbReference type="OMA" id="DNNGWGQ"/>
    <dbReference type="OrthoDB" id="207695at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046559">
        <property type="term" value="F:alpha-glucuronidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033939">
        <property type="term" value="F:xylan alpha-1,2-glucuronosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.379.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037054">
        <property type="entry name" value="A-glucoronidase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011395">
        <property type="entry name" value="Glyco_hydro_67_aGlcAse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005154">
        <property type="entry name" value="Glyco_hydro_67_aGlcAse_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011099">
        <property type="entry name" value="Glyco_hydro_67_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011100">
        <property type="entry name" value="Glyco_hydro_67_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029018">
        <property type="entry name" value="Hex-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07477">
        <property type="entry name" value="Glyco_hydro_67C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07488">
        <property type="entry name" value="Glyco_hydro_67M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03648">
        <property type="entry name" value="Glyco_hydro_67N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029900">
        <property type="entry name" value="Alpha-glucuronds"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55545">
        <property type="entry name" value="SSF55545"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="5 7 9" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 9" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7 9" id="KW-0858">Xylan degradation</keyword>
    <feature type="domain" description="Glyco_hydro_67N" evidence="10">
        <location>
            <begin position="15"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_67M" evidence="12">
        <location>
            <begin position="170"/>
            <end position="478"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_67C" evidence="11">
        <location>
            <begin position="521"/>
            <end position="749"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="323"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="402"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR029900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR029900-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF07477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO59157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="752" mass="84527" checksum="27F64EC09601BC55" modified="2011-01-11" version="1">MSKRMDMPKGSGYDAWLHYHRARLIEKMPAWCRVIVVHDTDDEVLQTAASELQQGLASMFGQQPKMSTVPVHVPFVALGTFQDHPCIAERFSAEEQAEVSAEGYRIRGVEAKQLADSTGQDHDDIKGQCVTVAGQNSKGVLYGVFHLLRYLQGGLDGKLKPTAKESLHAPSLDLLSNPANPIRMINHWDNMDGSVERGYAGPSIFYNNNAFTTNMERLRDYARLLASVGIQALSINNVNVHQVETELITDRFLPDVAKVAAIFRAYGIQIYLSINYASPIQLGGLTTADPLDPGVAEWWQTKAREIYAAVPDLGGFVVKADSENRPGPFSYGRHHADGANMLADALRPYGGRVIWRCFVYDCKQDWRDRKTDRARAAFDHFKPLDGLFRDNVILQIKNGPMDFQVREPVSPLFGALEATQVLLEFQIAQEYTGQQKHLCYLVPQWKEVLDFDTYAQGKGSTIKRIVSGALHSNSESGSHHRKATVHAGSGSFQEEPTNHVPKGTNFGIAAVSNIGADTNWTGHLLAQSNLYGYGRLSWDPDLSADEIADEWVRLTFSNQGKDCGDPELIPTIKQMLLDSWNIYESYTAPLGVGWMVSPNHHYGPDVDGYEYSMWGTYHFADCWGIGVDRTTATGTGYAGQYFPPVAEIYESTDTCPDELLLFFHHVPYTHVLHSGQTVIQHIYDTHFEGAERAAHLQATWISLREHLNELIYEQVLTRLEHQTEHAKEWRDRINTYFYRKSGIPDEKNRPIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7K0</accession>
    <name>E3E7K0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">D-ribose transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rbsA1</name>
        <name evidence="5" type="ORF">PPSC2_13305</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371408.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00995"/>
    <dbReference type="EnsemblBacteria" id="ADO56805">
        <property type="protein sequence ID" value="ADO56805"/>
        <property type="gene ID" value="PPSC2_13305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2835"/>
    <dbReference type="eggNOG" id="COG1129">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_92_3_9"/>
    <dbReference type="OMA" id="AKREIYQ"/>
    <dbReference type="OrthoDB" id="551294at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="3"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="246"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="493" mass="54418" checksum="255AD2F2EC578583" modified="2011-01-11" version="1">MQIQMKGIHKAFGTNQVLSGVDFDLREGEVHALMGENGAGKSTLMNILIGLHRRDEGTIIIDGQETYFANPKEAEQKGIAFIHQELNVWPEMTVLENLFIGKEMTSKWGLLDSSKMKALANERFSKLSVNLPLNGEAGECSVGQQQMIEIAKALMTDAKVIVMDEPTAALTEREIQKLFEVITSLKKDGVSIVYISHRMEEIFAICDRITIMRDGKTVDTQAIPDTNFDEVVRKMVGRELTERYPVRTPALGEVVLEVKNASHKGLFENVNFTVRSGEIVGFSGLMGSGRTEIMRSLFGLDALDSGEIHVRGKKVSIRKPDDAVKLGIGFITEDRKDEGLVLDFSIRENMVLTNLFSFTSKGFISGKKEMDFVNTLIKRLQIKTQSAEATVGSLSGGNQQKVVIAKWVGIGPNVLILDEPTRGVDVGAKREIYQLMNELTERGVAIIMVSSELPEVLGMSDRIVVVHEGKISGELNREEATQENIMTLATGGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7L7</accession>
    <name>E3E7L7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371425.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56822">
        <property type="protein sequence ID" value="ADO56822"/>
        <property type="gene ID" value="PPSC2_13395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2853"/>
    <dbReference type="eggNOG" id="ENOG5030617">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1179298_0_0_9"/>
    <dbReference type="OMA" id="FIIQPPH"/>
    <dbReference type="OrthoDB" id="1311773at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="26821" checksum="F99C484C98CCA2ED" modified="2011-01-11" version="1">MLSAFLYISLGFFDALAAVTLVLKLYMLPVWENRRKILIYAIGIALFSYLMREVIGMPKLDFPLQYLLMVLFLRLGLGIKTYLAAFSAGSGLTAYINLQLFVYIFANFFGVAQPDIINNTSGSSIYVIQLASIFTAYFISFVMGKYNFGFSFIIQPPHDFLKGENYLSPLNKMFIIGSLISFVTILVTLYMLYNSNTIGLLSISLLTFGISYFFSEKGDYEDARNAIEAHRIRNKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7P5</accession>
    <name>E3E7P5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 5">Thymidylate synthase</fullName>
            <shortName evidence="5">TS</shortName>
            <shortName evidence="5">TSase</shortName>
            <ecNumber evidence="1 5">2.1.1.45</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">thyA</name>
        <name evidence="8" type="ORF">PPSC2_13525</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + dUMP = 7,8-dihydrofolate + dTMP</text>
            <dbReference type="Rhea" id="RHEA:12104"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57451"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <dbReference type="EC" id="2.1.1.45"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Pyrimidine metabolism; dTTP biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the thymidylate synthase family. Bacterial-type ThyA subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.45" evidence="1 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371453.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01210"/>
    <dbReference type="EnsemblBacteria" id="ADO56850">
        <property type="protein sequence ID" value="ADO56850"/>
        <property type="gene ID" value="PPSC2_13525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2879"/>
    <dbReference type="eggNOG" id="COG0207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021669_0_0_9"/>
    <dbReference type="OMA" id="CMLTMRS"/>
    <dbReference type="OrthoDB" id="1212177at2"/>
    <dbReference type="UniPathway" id="UPA00575"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004799">
        <property type="term" value="F:thymidylate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006231">
        <property type="term" value="P:dTMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006235">
        <property type="term" value="P:dTTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00351">
        <property type="entry name" value="TS_Pyrimidine_HMase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.572.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00008">
        <property type="entry name" value="Thymidy_synth_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045097">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023451">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036926">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000398">
        <property type="entry name" value="Thymidylate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020940">
        <property type="entry name" value="Thymidylate_synthase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11548">
        <property type="entry name" value="PTHR11548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00303">
        <property type="entry name" value="Thymidylat_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00108">
        <property type="entry name" value="THYMDSNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55831">
        <property type="entry name" value="SSF55831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03284">
        <property type="entry name" value="thym_sym"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00091">
        <property type="entry name" value="THYMIDYLATE_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4 5" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thymidylat_synt" evidence="7">
        <location>
            <begin position="3"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="126"/>
            <end position="127"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="166"/>
            <end position="169"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="207"/>
            <end position="209"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="263"/>
        </location>
        <ligand>
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="30271" checksum="8BFDFF05850DC255" modified="2011-01-11" version="1">MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELLWFLRGDTNIAYLKENGVSIWDEWADEQGNLGPVYGSQWRAWETPDGQHIDQIANVIEAIKNNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIASYALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHIQQVHTQLERDPYPLPQLKILRKPESIFDYTYEDFVFENYEHHPGIKAPVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y0</accession>
    <name>E3E7Y0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371612.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57013">
        <property type="protein sequence ID" value="ADO57013"/>
        <property type="gene ID" value="PPSC2_14285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3050"/>
    <dbReference type="eggNOG" id="ENOG50308TU">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1045244_0_0_9"/>
    <dbReference type="OMA" id="MIWPIVA"/>
    <dbReference type="OrthoDB" id="957253at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="28922" checksum="A56DDDC7F303CAC2" modified="2011-01-11" version="1">MKGFLSLIGVLLVFGVGFSPFLAEYLWDDPFLIMDAPWYRPLIYTGFALIFLPGILGLFFGGGKVKKGVPGVGIITSVQQTGTYVNNQPQVKLGLTVTKQGEDKYDTALTTIIPLTSMAQFQPGSIVPLIVSEKDKMKVGLDLKGQVSQMDLQALMNEQMVKQGVSPELMEIAKTGEQAYAKILDVTPMGEAGPNKIKLQFTLTVTKSSGETFNVTTQKDVFSSQLSKLQQGSIIEVIYSPQDPSKLVIKTQVSEADVQQAFGSSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E807</accession>
    <name>E3E807_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore maturation protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spmA</name>
        <name evidence="4" type="ORF">PPSC2_14795</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371716.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02430"/>
    <dbReference type="EnsemblBacteria" id="ADO57120">
        <property type="protein sequence ID" value="ADO57120"/>
        <property type="gene ID" value="PPSC2_14795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3158"/>
    <dbReference type="eggNOG" id="COG2715">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089992_0_0_9"/>
    <dbReference type="OMA" id="ASDAMCT"/>
    <dbReference type="OrthoDB" id="1316897at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011642">
        <property type="entry name" value="Gate_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07670">
        <property type="entry name" value="Gate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="29"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="165"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="Gate" evidence="3">
        <location>
            <begin position="43"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="193"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="198"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="231"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="247" mass="26183" checksum="E177121E461C809A" modified="2011-01-11" version="1">MIHLIWVALICIGFVFAAAQGNIEVVTKAAFDGATTGVTVCFGLISVLVFWMGMMRLAEDGGLLQKISKLLSPLVAFLFPDVPRNHPAMGYILSNMSANLLGLGNAATPMGIKAMQELQTLNPDKQTATPAMCTLLALNTASITLIPTTLIAIRLNFHSAHPAEIVGTTLVATAIATFAAIAADRWYRSRELRRRPPANPPSQTSLAPRTSQAPTSVASSHVPPISSPAVPRTGITATKGRDTTWKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E838</accession>
    <name>E3E838_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YqxK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yqxK</name>
        <name evidence="1" type="ORF">PPSC2_14940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371744.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02575"/>
    <dbReference type="EnsemblBacteria" id="ADO57151">
        <property type="protein sequence ID" value="ADO57151"/>
        <property type="gene ID" value="PPSC2_14940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3187"/>
    <dbReference type="eggNOG" id="COG1379">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060249_0_0_9"/>
    <dbReference type="OMA" id="HAFTPWT"/>
    <dbReference type="OrthoDB" id="1095492at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="SSF89550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="398" mass="44003" checksum="5CB884095F2B5CD5" modified="2011-01-11" version="1">MDTNIIELNNYFADLHIHIGRTEKGAPVKISGSRDLTFANIAKEASGRKGIGLIGIIDCHAPNVQEDIRSYLHTGEMEEISGGGIAYRDTVILLGTELEIRAEGHPEAHVLAYFPDLAAMEDFTQWLSKHMKNVNLSSQRIYAPPRELQQQIYGRGGIMVPAHVFTPHKGIYGSSAARMEELLDMELISGVELGLSADSSMAGLISELDRFSFLTNSDAHSLGKIGREYNKLSLAKPSFDEFRMALERREGRRVCANYGLNPKLGKYHRSYCQSCGTIIDEQQMADERCPNCGHTKLVRGVLDRIWSIADREQPVIPSHRPPYIYQIPLEFIPGLGKAKLNQLLAAFGTEMNILHEVTQEELSEVVGKVLAEQIVLSREGRLALVSGGGGTYGKIAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8E8</accession>
    <name>E3E8E8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoIIGA</name>
        <name evidence="3" type="ORF">PPSC2_16575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372082.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03910"/>
    <dbReference type="MEROPS" id="A36.001"/>
    <dbReference type="EnsemblBacteria" id="ADO57497">
        <property type="protein sequence ID" value="ADO57497"/>
        <property type="gene ID" value="PPSC2_16575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3538"/>
    <dbReference type="eggNOG" id="ENOG50301AF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059158_0_0_9"/>
    <dbReference type="OMA" id="IYLDVIW"/>
    <dbReference type="OrthoDB" id="1492550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030436">
        <property type="term" value="P:asexual sporulation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005081">
        <property type="entry name" value="SpoIIGA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03419">
        <property type="entry name" value="Peptidase_U4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF018571">
        <property type="entry name" value="SpoIIGA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02854">
        <property type="entry name" value="spore_II_GA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="90"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR018571-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="37227" checksum="9DD303168B682586" modified="2011-01-11" version="1">MVVYIDLIFLANLFIDAVLLMVTAWMRKIRPVWWRLMTSAGIGAMYVVMMFVPELSFLFTFLIKLVLSVIMLLVAFGFGSMQKYLRTMGAFYMINFVAAGGILGMHYFLQNTGDLFNGIWYTASGGMSFELKIAFWFILCAFGGVMLFFRIVQSSKQRTERMSGFLGQVQVWIGQDHIECTGLLDTGNQLHDPLTRTPVMVMEAALWESYLPASWLQKCSEGNADQLVMDLGEESFSWQDRVRLVPYRGINRSHSFMLALKPDRVEVVMNGVHFVHHRVLIGLDGGKLSAEGKYRAIIHPDVTAHEEGEADTNLKRKAYARDHFTESG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8H6</accession>
    <name>E3E8H6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">PhoH1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">phoH1</name>
        <name evidence="4" type="ORF">PPSC2_16710</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372109.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04045"/>
    <dbReference type="EnsemblBacteria" id="ADO57525">
        <property type="protein sequence ID" value="ADO57525"/>
        <property type="gene ID" value="PPSC2_16710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3565"/>
    <dbReference type="eggNOG" id="COG1875">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022283_2_1_9"/>
    <dbReference type="OMA" id="KMSPWAQ"/>
    <dbReference type="OrthoDB" id="445854at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003714">
        <property type="entry name" value="PhoH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002716">
        <property type="entry name" value="PIN_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02562">
        <property type="entry name" value="PhoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13638">
        <property type="entry name" value="PIN_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00670">
        <property type="entry name" value="PINc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PINc" evidence="3">
        <location>
            <begin position="3"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="443" mass="49692" checksum="0D697B6AEB5F965C" modified="2011-01-11" version="1">MKKIFVLDTNVLLHDPKAIFTFKEHEVVIPAVVLEEIDSKKRNADEIGRNARNVSRLLDGLREVGHLHSGVPLPQGGRLKVELNHRSFLKVQEMFGEVSNDNRILAVALNYHLEEQEQSEPRSVVLVSKDVLVRIKADVLGLLTEDYLSDRTGDPSELYPGYSAIQVHPSIIDEFYSNRFLPIKPLKLPYTLYPHEFVILKDEMGTGKSALLKVNQEAERLEPLYLSNESVWGISARNAQQRMALELLLNDDIPLVTITGKAGTGKTLLALAAGLLKVEDEHRFKKLLIARPVVPMGKDIGYLPGEKDEKLRPWMQPIYDNLEYLFDAKKSGDIDKILMGLGSIQVEALTYIRGRSIPGQFIIVDEAQNLSRHEIKTIVSRVGEGSKIILMGDPEQIDHPYLDAASNGLTYVVERFKQEGISGHIMLEKGERSKLAQLAADLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Q3</accession>
    <name>E3E8Q3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ydeN</name>
        <name evidence="1" type="ORF">PPSC2_17805</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372342.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3808"/>
    <dbReference type="EnsemblBacteria" id="ADO57762">
        <property type="protein sequence ID" value="ADO57762"/>
        <property type="gene ID" value="PPSC2_17805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3805"/>
    <dbReference type="eggNOG" id="COG3545">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_088863_3_0_9"/>
    <dbReference type="OMA" id="NHWFPWL"/>
    <dbReference type="OrthoDB" id="721431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010662">
        <property type="entry name" value="Hydrolase_RBBP9/YdeN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06821">
        <property type="entry name" value="Ser_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="21961" checksum="56DE73B1260455B6" modified="2011-01-11" version="1">MTNLQNQKQVYIIHGYTASPTDHWFPWLQDKLQEDGVSVNILDMPNSQAPKLNEWIEHLLQNIKALHKDIYFIGHSLGCVSILRYLQQVNIPEPLGGTVFVSGFTDPVPSLPSLNEFTNDHLDHQQITDSLKARVVIASKDDAIVPFALSKKLAEDMQADFHEVDHGGHFLQSDGFTTLPIVYQVLIEMMNENK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9D2</accession>
    <name>E3E9D2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371991.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3448"/>
    <dbReference type="EnsemblBacteria" id="ADO57405">
        <property type="protein sequence ID" value="ADO57405"/>
        <property type="gene ID" value="PPSC2_16135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3446"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OrthoDB" id="495395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="471" mass="54649" checksum="8F69AC353A76BAED" modified="2011-01-11" version="1">MEHTPTIRAELDRFLQQEGLSFSQFGHIADMNRGAVSAIVTGNKPLSVNQLDRITEAMGLPEGYFYDLFVENYIIDHPPNMRRIEPFIFRCAELDKLDAIRRVVGAIMDNLLYSPKLFEIAEGLLAQGRHEAALVLYEGVAEAEKYQHSERLAVCQYRIFTIQIGDDQSQNLKAATLFEPFVERLDEIDQLDALKDLANVYRSLRKWDKVDEIAKLMRAKAEIQYNLKHEHKSRECESTNKLTRPLFVYISYADLLCAGVCEAKGDYQQALQYTYAYADLEWVREMDEDTLYWINLFKGWAQANAVANKLLSGDINALYDYVKYIGAPSDTSEQDKVAQLLNIMMTANRYQIDVSDILQRFETDVNSLLLFPQSNDIYTKQVIPEQYARLSYELAYYHLYRGTYDDGFKYLMYSMVSYHTLNNETYFIKCMVLFERYRAYAVSETKAAYLEFIERVWIADVKKNGAIDCRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J7</accession>
    <name>E3E9J7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stage V sporulation protein AEB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoVAE</name>
        <name evidence="2" type="ORF">PPSC2_17170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372209.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04505"/>
    <dbReference type="EnsemblBacteria" id="ADO57628">
        <property type="protein sequence ID" value="ADO57628"/>
        <property type="gene ID" value="PPSC2_17170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3667"/>
    <dbReference type="eggNOG" id="ENOG50315MJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112786_1_0_9"/>
    <dbReference type="OMA" id="ITGIFEV"/>
    <dbReference type="OrthoDB" id="1965283at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014204">
        <property type="entry name" value="Spore_V_AE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005562">
        <property type="entry name" value="SpoVA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38450">
        <property type="entry name" value="PTHR38450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03862">
        <property type="entry name" value="SpoVAC_SpoVAEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02839">
        <property type="entry name" value="spore_V_AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="118" mass="12206" checksum="84033F1FFA096B15" modified="2011-01-11" version="1">MIFLWAFLVGGAICVVGQLMMDVIKMTPAHTMSTLVVAGAIADAVGIYDPLIKFAGAGATIPITSFGNSLVHGALTELEKDGWLGVITGIFSLTSAGISSAIIFSFLACLFVRPKGSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAK0</accession>
    <name>E3EAK0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">DNA ligase</fullName>
            <ecNumber evidence="11">6.5.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Polydeoxyribonucleotide synthase [NAD(+)]</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ligA</name>
        <name evidence="13" type="synonym">ligA3</name>
        <name evidence="13" type="ORF">PPSC2_22625</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="11">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the NAD-dependent DNA ligase family. LigA subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.2" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373297.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10100"/>
    <dbReference type="EnsemblBacteria" id="ADO58758">
        <property type="protein sequence ID" value="ADO58758"/>
        <property type="gene ID" value="PPSC2_22625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4792"/>
    <dbReference type="eggNOG" id="COG0272">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007764_2_1_9"/>
    <dbReference type="OMA" id="HDVEHEI"/>
    <dbReference type="OrthoDB" id="241401at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003911">
        <property type="term" value="F:DNA ligase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00114">
        <property type="entry name" value="LIGANc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01588">
        <property type="entry name" value="DNA_ligase_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041663">
        <property type="entry name" value="DisA/LigA_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033136">
        <property type="entry name" value="DNA_ligase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001679">
        <property type="entry name" value="DNAligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013839">
        <property type="entry name" value="DNAligase_adenylation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013840">
        <property type="entry name" value="DNAligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003583">
        <property type="entry name" value="Hlx-hairpin-Hlx_DNA-bd_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004150">
        <property type="entry name" value="NAD_DNA_ligase_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00533">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01653">
        <property type="entry name" value="DNA_ligase_aden"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03120">
        <property type="entry name" value="DNA_ligase_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12826">
        <property type="entry name" value="HHH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001604">
        <property type="entry name" value="LigA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00292">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00278">
        <property type="entry name" value="HhH1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00532">
        <property type="entry name" value="LIGANc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="SSF52113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00575">
        <property type="entry name" value="dnlj"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01056">
        <property type="entry name" value="DNA_LIGASE_N2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9 11" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3 11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 11 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="7 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10 11" id="KW-0464">Manganese</keyword>
    <keyword evidence="4 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 11" id="KW-0520">NAD</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="BRCT" evidence="12">
        <location>
            <begin position="591"/>
            <end position="671"/>
        </location>
    </feature>
    <feature type="active site" description="N6-AMP-lysine intermediate" evidence="11">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="31"/>
            <end position="35"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="79"/>
            <end position="80"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="290"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="314"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="408"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="411"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="424"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="430"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="671" mass="74786" checksum="35946327EF168E9B" modified="2011-01-11" version="1">MNPMHRMEQLVAELNTYNYHYYTLDDPQISDKEYDVLYDELVALEQTSGLVLPDSPTQRVGGEILKGFTPHRHLAPLWSLDKAQNMEQLRAWNARVVKLVNDYNTKNPEQPLPSPGYAIELKFDGLTLNLTYTDGQLVQASTRGNGVVGEGILAQVKTIKSVPLKIPFQNGTIEVQGEGIMNLSVLSNYNEKAVEPLKNARNAAAGALRNLNPKVTAERRLNAFFYNVGYADRIQFNSHQEMMTFLRENHFKVNPYLTYFDNFDDVMEQLIEIEESRAGLDYLIDGAVLKITDMRTREVLGYTDKFPRWAVAYKFEAEETTTVLNSVEWNVGRTGKITPLARVEPVELAGVTVQNCTLNNAGDIERKNLKFALGARVFIRRSNDVIPEILGKVTSENDGEEIVVPEHCPACGFPLQQRGAHLFCDNKLGCKPQIVARISHFASRDAMDIETFSDKTAIQLHDELGVREPADLYTLQYDDLVKLERFGEKKANNLLAALEKSKERDLASFLYALGIPNTGKATTRMLAEHYRDLHKTMSATVDELIELPDVGGIVAESIVAFFADPFTQAGIEKMLSLGVKAQAPEAPQVKKIDSFFSGKTVVLTGTLHQLTRDEAASRLEALGAKVAGSVSKKTDLVIAGEKAGSKLAKAQQLGIDTIEDEDEFIRLLEQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAQ1</accession>
    <name>E3EAQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Vancomycin resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">vanW</name>
        <name evidence="5" type="ORF">PPSC2_22855</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373347.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10330"/>
    <dbReference type="EnsemblBacteria" id="ADO58809">
        <property type="protein sequence ID" value="ADO58809"/>
        <property type="gene ID" value="PPSC2_22855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4840"/>
    <dbReference type="eggNOG" id="COG2720">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011572_2_1_9"/>
    <dbReference type="OMA" id="QEGNVMN"/>
    <dbReference type="OrthoDB" id="967747at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011098">
        <property type="entry name" value="G5_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007391">
        <property type="entry name" value="Vancomycin_resist_VanW"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07501">
        <property type="entry name" value="G5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04294">
        <property type="entry name" value="VanW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01208">
        <property type="entry name" value="G5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51109">
        <property type="entry name" value="G5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="G5" evidence="4">
        <location>
            <begin position="371"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="449"/>
            <end position="472"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="52947" checksum="14D8E5E258C6FA79" modified="2011-01-11" version="1">MKKIHLSVIWIWSGVLALAVLWGGLHLYADRQTLPEGVRVGGVNVGGMHKTDALRLVEKKLDALKQRPLLLTDSDSSAQDIKLTLAEAGISYKADAFRNAVKALSAKHLWTRVQTRFSFEKEWSITPFQLEKILKSKFGADWEEQRYGMPINAVRQIDANDQVRYIPERSARRLDWPKLDVVMNQALPKDFTASEEPIRVELPFYQLEPKITVDSLRSEGIERKITQFSTSLGSSSEGRVYNVNSAASTVDGLILKPGHIFDYGQVIAKAERTHGFREAPVIVNGRLESGIGGGICQVSSTVYNAALRVGLDIVERRNHSLPVSYLPKGQDATFATGSINFRFRNNTGKHLLLRAVVQNRTLTVKIFGTFPSNISYELESHTVRVLPIPVKRIRNDSLSPGFYQVIRQGKEGYVVETFRIKKVDGKPVERTRISRDTYRAQQRIIASYGGSTSSEPQTRELEKPIVEDGISE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAQ5</accession>
    <name>E3EAQ5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">PMT_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PPSC2_22870</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373351.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10345"/>
    <dbReference type="EnsemblBacteria" id="ADO58813">
        <property type="protein sequence ID" value="ADO58813"/>
        <property type="gene ID" value="PPSC2_22870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4843"/>
    <dbReference type="eggNOG" id="COG1807">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038353_0_0_9"/>
    <dbReference type="OMA" id="WRLYRVL"/>
    <dbReference type="OrthoDB" id="806694at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038731">
        <property type="entry name" value="RgtA/B/C-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13231">
        <property type="entry name" value="PMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="148"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="191"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="230"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="296"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="319"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="346"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="376"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="PMT_2" evidence="9">
        <location>
            <begin position="90"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF13231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="544" mass="61952" checksum="FBB5C7FDC07FBBF1" modified="2011-01-11" version="1">MSFRKMSASRWMAIGLFVFILALELSAGIYFSYVLGYMHTDALSRVANAFYVLYSRDPHLGAIGFIWNPLPSLLEMVILLLYPIFPALASYGLAAVILSATFSALTAMLLYRAGVRTGLSSRMSLLLALLYALNPFILLFGANGLSDSLYIYFIMMTVIEFALWLKDRMTASLIVSGLALAMAFWTRYEAVPLGVAMAVGVVLAILFLHRNLGRRELALREKLHKVEATWLLLLLPVVFSGLLWIFFNYLIMGNAFYFLNSEYSNTAQSAELLNDDKFVEIFSNPLVALKFIASKTIWYSVPLFAILFIRLLSGRLFRWGTLIILLLFLSVPGLQFLLMMRQSSYGWFRYFMYVFPITVAWVPYELSQLQGRWRRAAFGLVSVSLLLTAGLLSYALTRPDIAPDENSFLTRTGNVNYVRQESDRKIAVWLDEHLPKSTIMTDSASAYTMIVYSQYPKRFLITSDYAFNKALSYPQENHVDYILVPKIMSGMPLSKINMVYPNLYEHGAPWVQFEREFNGEWRLYKVLPKSLTKESPSTETTTNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAS7</accession>
    <name>E3EAS7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cytokinin riboside 5'-monophosphate phosphoribohydrolase</fullName>
            <ecNumber evidence="1">3.2.2.n1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvdD</name>
        <name evidence="2" type="ORF">PPSC2_23705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LOG family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.n1" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373527.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11210"/>
    <dbReference type="EnsemblBacteria" id="ADO58991">
        <property type="protein sequence ID" value="ADO58991"/>
        <property type="gene ID" value="PPSC2_23705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5017"/>
    <dbReference type="eggNOG" id="COG1611">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058336_4_2_9"/>
    <dbReference type="OMA" id="HQKPIGL"/>
    <dbReference type="OrthoDB" id="1255127at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009691">
        <property type="term" value="P:cytokinin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005269">
        <property type="entry name" value="LOG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031100">
        <property type="entry name" value="LOG_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03641">
        <property type="entry name" value="Lysine_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00730">
        <property type="entry name" value="TIGR00730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0203">Cytokinin biosynthesis</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="19902" checksum="814723BB80323169" modified="2011-01-11" version="1">MNSICVFAGSRPGHSSVYVEAAGKLGEAMARQHIRLIYGGSSRGLMGKVADELLAGDGQVTGIMPTLLFDAEIIHRGVTEFIEVASMHERKAAMSEMADAFIALPGGLGTFEELFEVLCWAQIGIHRKPIGLLNVNGYFDPLIEMVRHSVQEGFTGADHPALLSISADPDELLHMLKNKAENLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB09</accession>
    <name>E3EB09_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373822.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12535"/>
    <dbReference type="EnsemblBacteria" id="ADO59289">
        <property type="protein sequence ID" value="ADO59289"/>
        <property type="gene ID" value="PPSC2_25040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5306"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_3_6_9"/>
    <dbReference type="OMA" id="DDLYMYS"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="13"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="21337" checksum="E856A90C02A2E88D" modified="2011-01-11" version="1">MKGEFPVITTERLVLRKMVATDSKDMLEYFSDEQVMKFYGVSPFESEEEALEEIRWYDRIFETDQGIRWALQTKDGKIIGSCGFHNWDQRHHRAEMGYELSRACWGQGLMSEVLAAVIDYGFNTLLLNRIQALVEPENTQSLRLLEKAGFRQEGILSQYEFTLGKYDDLCMCALVKSEYINYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB39</accession>
    <name>E3EB39_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">L-arabinose isomerase</fullName>
            <ecNumber evidence="6">5.3.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">araA</name>
        <name evidence="8" type="ORF">PPSC2_25175</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the conversion of L-arabinose to L-ribulose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>beta-L-arabinopyranose = L-ribulose</text>
            <dbReference type="Rhea" id="RHEA:14821"/>
            <dbReference type="ChEBI" id="CHEBI:16880"/>
            <dbReference type="ChEBI" id="CHEBI:40886"/>
            <dbReference type="EC" id="5.3.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="6">Binds 1 Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the arabinose isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.4" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373852.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EB39"/>
    <dbReference type="STRING" id="1406.LK13_12670"/>
    <dbReference type="EnsemblBacteria" id="ADO59319">
        <property type="protein sequence ID" value="ADO59319"/>
        <property type="gene ID" value="PPSC2_25175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5336"/>
    <dbReference type="eggNOG" id="COG2160">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045663_0_0_9"/>
    <dbReference type="OMA" id="REYAFIN"/>
    <dbReference type="OrthoDB" id="507566at2"/>
    <dbReference type="UniPathway" id="UPA00145">
        <property type="reaction ID" value="UER00565"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008733">
        <property type="term" value="F:L-arabinose isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019569">
        <property type="term" value="P:L-arabinose catabolic process to xylulose 5-phosphate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00519">
        <property type="entry name" value="Arabinose_Isome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024664">
        <property type="entry name" value="Ara_Isoase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038583">
        <property type="entry name" value="AraA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004216">
        <property type="entry name" value="Fuc/Ara_isomerase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009015">
        <property type="entry name" value="Fucose_isomerase_N/cen_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003762">
        <property type="entry name" value="Lara_isomerase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38464">
        <property type="entry name" value="PTHR38464"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11762">
        <property type="entry name" value="Arabinose_Iso_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02610">
        <property type="entry name" value="Arabinose_Isome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001478">
        <property type="entry name" value="L-ara_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50443">
        <property type="entry name" value="SSF50443"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53743">
        <property type="entry name" value="SSF53743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0054">Arabinose catabolism</keyword>
    <keyword evidence="5 6" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4 6 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3 6" id="KW-0464">Manganese</keyword>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Arabinose_Iso_C" evidence="7">
        <location>
            <begin position="360"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="306"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="331"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="348"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="447"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF11762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="474" mass="53224" checksum="7DF9098769DD656F" modified="2011-01-11" version="1">MSTVSTKQFWFVVGSQHLYGEEALAEVKAHAQEMTDALNKSGVLPYPLVLQDLAVSADKITSLMKEVNYRDEVAGVITWMHTFSPAKMWIRGTKLLQKPLLHLATQYNESIPWATIDMDFMNLNQAAHGDREYGFINARLKKQNKVVVGYWERAEVQKQIAEWMDVAVAYNESFNIKVARFGDNMRHVGVTEGDKVEAQIQFGWTVDYFGIGDLVQYVNAVKEEEIDALFAEYSELYEFDYGTYSKEAWESSVRVQASYEIAIKRFLDDGGYTAFTTNFEDLYGMKQLPGLAVQRLMAQGYGFAGEGDWKTAALDRLLKVMSHNQSTGFMEDYTYELAAGQESILQSHMLEVDPTLASNKPKIIVSPLGIGDREDPARLVFDGKAGDGVVVSMADFGTHYKLLINEVTAFEPTVPAPKLPVARVLWNVKPNFQDGVKAWIENGGGHHTVVSLNLTTDQIVTYAKLVNLEYVIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBA0</accession>
    <name>E3EBA0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58432.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324716.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08170"/>
    <dbReference type="EnsemblBacteria" id="ADO58432">
        <property type="protein sequence ID" value="ADO58432"/>
        <property type="gene ID" value="PPSC2_20940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4466"/>
    <dbReference type="eggNOG" id="ENOG5033F75">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_175527_0_0_9"/>
    <dbReference type="OMA" id="MRVNKGN"/>
    <dbReference type="OrthoDB" id="1996256at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58432.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="11245" checksum="5C7CA7C7798C3249" modified="2015-05-27" version="2">MRVNKGNGLAIVLIVLGSIMLLGKFTPFFGHFVGHLIGYLIPIAMVMLGYYGVKRGNALFGWIVLVLGVLILLGKLSWLIGPLLAIGLIIFGVSMLSDRRSRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBB2</accession>
    <name>E3EBB2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YgxA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ygxA</name>
        <name evidence="3" type="ORF">PPSC2_21075</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58444.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08305"/>
    <dbReference type="EnsemblBacteria" id="ADO58444">
        <property type="protein sequence ID" value="ADO58444"/>
        <property type="gene ID" value="PPSC2_21075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4481"/>
    <dbReference type="eggNOG" id="ENOG502Z8VM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066613_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029348">
        <property type="entry name" value="NTF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041143">
        <property type="entry name" value="YgxA_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18576">
        <property type="entry name" value="HTH_52"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14540">
        <property type="entry name" value="NTF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NTF-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="HTH_52" evidence="2">
        <location>
            <begin position="228"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58444.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="34454" checksum="75019E868A52B501" modified="2015-05-27" version="2">MQLTKLNLMHDELLQEDSIGVISYRKPGEYFHGSMLYDFDELILIIGEGREPVRSIQHLYINGLKCQVLYTTLSCLKGWIIAGEQANIIDYVLEGRIVWERDDRVRLLRQEIIEFDDPLREQKRFHEFSRFLVNYVQGKKAVREGRIIDAYQSVLKALDHWASIELIERGIYPKVHLWVQVQPLDRTIEKLYNELTLSTETLEQRVELVLLACEFSVMSKMEDCSSPLFRILGSRREPWSIDELMNHPELKNLQLDLTVVLRKLVYRSLIRESAIGEFRDRGQNRELRYSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBC1</accession>
    <name>E3EBC1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C</fullName>
            <shortName evidence="6">Asp/Glu-ADT subunit C</shortName>
            <ecNumber evidence="6">6.3.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">gatC</name>
        <name evidence="8" type="ORF">PPSC2_21120</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP + H2O + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + 2 H(+) + L-asparaginyl-tRNA(Asn) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14513"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="Rhea" id="RHEA-COMP:9677"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 6">
            <text>ATP + H2O + L-glutamine + L-glutamyl-tRNA(Gln) = ADP + H(+) + L-glutamate + L-glutaminyl-tRNA(Gln) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4 6">Heterotrimer of A, B and C subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the GatC family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373022.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08350"/>
    <dbReference type="EnsemblBacteria" id="ADO58453">
        <property type="protein sequence ID" value="ADO58453"/>
        <property type="gene ID" value="PPSC2_21120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4490"/>
    <dbReference type="eggNOG" id="COG0721">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105899_6_1_9"/>
    <dbReference type="OMA" id="VTPMAMK"/>
    <dbReference type="OrthoDB" id="1780195at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050566">
        <property type="term" value="F:asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006450">
        <property type="term" value="P:regulation of translational fidelity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00122">
        <property type="entry name" value="GatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003837">
        <property type="entry name" value="Asp/Glu-ADT_csu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036113">
        <property type="entry name" value="Asp/Glu-ADT_sf_sub_c"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15004">
        <property type="entry name" value="PTHR15004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02686">
        <property type="entry name" value="Glu-tRNAGln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141000">
        <property type="entry name" value="SSF141000"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00135">
        <property type="entry name" value="gatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="10978" checksum="C1A38B79EF2C58A9" modified="2011-01-11" version="1">MNISKEDVRHVARLSRLNLTENEEETMTGQLNAILHYAEKLNELDTEQVKPTTHVLHVSNVMRDDEVRESLTHEQVMRNAPEEEDGQFKVPAVLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBI0</accession>
    <name>E3EBI0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9 10">Endo-1,4-beta-xylanase</fullName>
            <ecNumber evidence="3 9 10">3.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">xlnB</name>
        <name evidence="13" type="ORF">PPSC2_22055</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9 10">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-xylosidic linkages in xylans.</text>
            <dbReference type="EC" id="3.2.1.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9 10">Glycan degradation; xylan degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9 10">Belongs to the glycosyl hydrolase 11 (cellulase G) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.8" evidence="3 9 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373220.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09205"/>
    <dbReference type="CAZy" id="GH11">
        <property type="family name" value="Glycoside Hydrolase Family 11"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58654">
        <property type="protein sequence ID" value="ADO58654"/>
        <property type="gene ID" value="PPSC2_22055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4694"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052631_3_2_9"/>
    <dbReference type="OMA" id="DYWQNWT"/>
    <dbReference type="OrthoDB" id="1121261at2"/>
    <dbReference type="UniPathway" id="UPA00114"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031176">
        <property type="term" value="F:endo-1,4-beta-xylanase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013319">
        <property type="entry name" value="GH11/12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018208">
        <property type="entry name" value="GH11_AS_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033119">
        <property type="entry name" value="GH11_AS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033123">
        <property type="entry name" value="GH11_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001137">
        <property type="entry name" value="Glyco_hydro_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00457">
        <property type="entry name" value="Glyco_hydro_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00911">
        <property type="entry name" value="GLHYDRLASE11"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00776">
        <property type="entry name" value="GH11_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00777">
        <property type="entry name" value="GH11_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51761">
        <property type="entry name" value="GH11_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="7 9 10" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 9 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 9 10" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0732">Signal</keyword>
    <keyword evidence="4 9 10" id="KW-0858">Xylan degradation</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168326" description="Endo-1,4-beta-xylanase" evidence="11">
        <location>
            <begin position="29"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="GH11" evidence="12">
        <location>
            <begin position="19"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="9">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="9">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="23204" checksum="E9F3F01818A9F780" modified="2011-01-11" version="1">MFKFSKKMLTVVLAASMSFGVFATTSSAATDYWQNWTDGGGTVNAVNGSGGNYSVTWKDTGNFVVGKGWTTGSPNRTINYNAGVWAPSGNGYLALYGWTRNALIEYYVVDSWGTYRPTGTYKGTVTSDGGTYDIYTTMRYDAPSIEGQKTTFIQYWSVRQTKRPTGGNSTITFSNHVKAWASKGMHLGNNWSYQVLATEGYQSSGSSNVTVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBR6</accession>
    <name>E3EBR6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Flagellar basal body protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">flhP</name>
        <name evidence="5" type="ORF">PPSC2_23200</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373421.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10685"/>
    <dbReference type="EnsemblBacteria" id="ADO58884">
        <property type="protein sequence ID" value="ADO58884"/>
        <property type="gene ID" value="PPSC2_23200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4913"/>
    <dbReference type="eggNOG" id="COG4786">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013687_0_2_9"/>
    <dbReference type="OMA" id="ITMGDQM"/>
    <dbReference type="OrthoDB" id="1488472at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="5" id="KW-0966">Cell projection</keyword>
    <keyword evidence="5" id="KW-0969">Cilium</keyword>
    <keyword evidence="5" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="3">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="4">
        <location>
            <begin position="191"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="29458" checksum="59239C5E9C1A1B45" modified="2011-01-11" version="1">MNNSMIGAMVSMASVQQRLDLIADNIANVNTVGYKSKQGSFEDVLANVQQQPSTYLQNGRAMPLGYNLGYGVKTTAIMKNMEQGPLKETGLPTDLAIQGNALFEIQGNGQKAWTRDGGFHFIPDPNDNETMMLTTAEGYSVLDNNDIPVTAPAGSKVAINSDGELLIRANGTGAPTVGQRIKLMDVQRPEGLQQRDDNLFVLANGVTEADVFGAAGVAGAVPTDVSVRSGYLEESNVNLAGEMTDMMQVQRMYQMAARALTSSDTMMNLANNLRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC10</accession>
    <name>E3EC10_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373883.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12810"/>
    <dbReference type="EnsemblBacteria" id="ADO59350">
        <property type="protein sequence ID" value="ADO59350"/>
        <property type="gene ID" value="PPSC2_25315"/>
    </dbReference>
    <dbReference type="GeneID" id="66575005"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25315"/>
    <dbReference type="eggNOG" id="ENOG5033H3T">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_183749_0_0_9"/>
    <dbReference type="OMA" id="HRSAMDE"/>
    <dbReference type="OrthoDB" id="2074106at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="7769" checksum="4D566C93F85EAC45" modified="2011-01-11" version="1">MNSHRSAMDEVRMAAKLADLKDEHYRNTLALSTLIELLVDKGIVTREEVERKAAELDSFMAHLPYPKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECC0</accession>
    <name>E3ECC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alcohol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yogA</name>
        <name evidence="2" type="ORF">PPSC2_01380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368905.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3ECC0"/>
    <dbReference type="STRING" id="1406.LK13_14100"/>
    <dbReference type="EnsemblBacteria" id="ADO54263">
        <property type="protein sequence ID" value="ADO54263"/>
        <property type="gene ID" value="PPSC2_01380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.273"/>
    <dbReference type="eggNOG" id="COG0604">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026673_3_4_9"/>
    <dbReference type="OMA" id="LNHHDLW"/>
    <dbReference type="OrthoDB" id="884088at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="11"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="35100" checksum="5EBCA1A118689161" modified="2011-01-11" version="1">MKAVIHTDKHGLEGLMYKDVTDRQPGHSEVKVRLKAAGLNHRDLFLMADRTANDAPLILGSDGAGVIEAVGAGVPTSLVGTDVIINPCIGWEKTNHVPLVPAILGVPSDGTLAESVIVPVQNAVSKPAYLSWEEAGVLPLSALTAYRALFTRGQLQQGDHVLIPGIGGGVATYAMLMALAAGARVSVTSRSEAKKQAALAHGAHHAFDSDSDWKESMNGDTVDLILDSIGPATFDKYLDVIKPDGRIITFGASSGDQIEIPLRSIFFPQISIIGTSMGSGEEFADMLQFMERHSLHPIIDSVFPLQDTAQAFYRMQQGVQLGNIGIRIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECC7</accession>
    <name>E3ECC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA polymerase sigma factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-423</name>
        <name evidence="2" type="ORF">PPSC2_01415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368912.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0285"/>
    <dbReference type="EnsemblBacteria" id="ADO54270">
        <property type="protein sequence ID" value="ADO54270"/>
        <property type="gene ID" value="PPSC2_01415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.280"/>
    <dbReference type="eggNOG" id="ENOG5033ZM9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_485587_0_0_9"/>
    <dbReference type="OMA" id="GISHIEF"/>
    <dbReference type="OrthoDB" id="338377at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="538" mass="60949" checksum="F2811608E0EF3442" modified="2011-01-11" version="1">MSRYFEKEQHIPQPEYDAMWVNIEQEATKRKATLQQSQEAPMHRTKIVPASIVFSCFLLIAIPVFASVTINWDRIGGRSVTNAINSGIGQRYDLKVTDAGITMNLNGVVTDGEKMKMLISLDPGTDPSSYIGFAIEKTMVTSNSNNKERAHGYLNYDPKSQKLLGIYETVDTLKDRKKDYTLEAQNLIFYRNQDIPLKTNHQAGDTLVTGTKQYPNIYIESVRQTNNKTVVRFRVAAAPSDLGRGNPHLVMKVGDKEIDAIPTILPSDSPELHIEQVFNMTAQDWRKANLHFCYIEEAKRIEGTWKFEFEADGKKASEAIYSKKLHSSAEFQENTGATLDQLIITPLDIEILVTERDSLKKGNVHYKTAQLVIGDKKINGGWNLKGAGPENYQHLYQFESSEWYKDWSDVPMKLILKDAVIQKRDTSKNWITLHKPKEEKQFAELNVDGYQIDFTYYTEGKDVIVESKSVSPGFKGVNQTTMRINGKEVVPEIIAKGMVSTGVNVDRYKDIELDGKVELNPGLYKYSDPGRNIEVVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECU1</accession>
    <name>E3ECU1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fnr1</name>
        <name evidence="5" type="ORF">PPSC2_02080</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369025.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14845"/>
    <dbReference type="EnsemblBacteria" id="ADO54385">
        <property type="protein sequence ID" value="ADO54385"/>
        <property type="gene ID" value="PPSC2_02080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.394"/>
    <dbReference type="eggNOG" id="COG0664">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075053_3_2_9"/>
    <dbReference type="OMA" id="VLCRDFG"/>
    <dbReference type="OrthoDB" id="1596937at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018335">
        <property type="entry name" value="Tscrpt_reg_HTH_Crp-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00034">
        <property type="entry name" value="HTHCRP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00042">
        <property type="entry name" value="HTH_CRP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0010">Activator</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="3">
        <location>
            <begin position="22"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="4">
        <location>
            <begin position="152"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="27690" checksum="F033C99F8CE7C418" modified="2011-01-11" version="1">MQATCMERFRDETQRTGIQLFLTEEHFELLKDIMSWKKVKAGVMLFREGDDAEQLYYIHSGHVKLRKSTEDGKELILTIQHQGDLIGEFSGIDGEEYSCTAETADVCELGVVLVKDLESLLSKNGEMALQFIQWMAMKQRIMQSRFRDLLLYGKTGALASTLIRASNTCGVAVKDGILLNMKLSHSELGEMIGATRESVNRMLSSLKEQGTLDTRDGKIVIHDLKVLRAMCCCPSYGQCAHEICRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECY4</accession>
    <name>E3ECY4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Iron-dicitrate transporter subunit FecD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yfmE</name>
        <name evidence="8" type="ORF">PPSC2_04300</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369487.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17110"/>
    <dbReference type="EnsemblBacteria" id="ADO54853">
        <property type="protein sequence ID" value="ADO54853"/>
        <property type="gene ID" value="PPSC2_04300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.857"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_1_9"/>
    <dbReference type="OMA" id="LLIRNPM"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="229"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="268"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="299"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="34073" checksum="CCF63B6352A99FBF" modified="2011-01-11" version="1">MKKLWILLVLMLGVSFVAIGVGSTYITPAELIAALTDRNASSWFIVHHYRLPRGLLAIMAGAGLAVAGVLLQGMIRNPLASPDVVGVSKGAGFAAVLVIVLLPSSPVALLPVAAFVGAGLAALLLVQLSMKGGMRPNMLALTGLAVGAIFQAATDYILVKYPLEASDTLTWLAGSLWGKGWDEVYGLLPWLIVLLPLAYTLQRKLDIMSLDEESSAGLGLSVKRMRTGLLAVSVALAASCVAAIGSIGFIGLLAPHLARRLFGNRHRYLLPGAAMIGALILVLADALGRGLKPPLEIPAGIVTAVIGAPYFLYLLLRERKQKSSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDJ1</accession>
    <name>E3EDJ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_04835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369603.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0988"/>
    <dbReference type="EnsemblBacteria" id="ADO54970">
        <property type="protein sequence ID" value="ADO54970"/>
        <property type="gene ID" value="PPSC2_04835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.973"/>
    <dbReference type="eggNOG" id="ENOG50335U2">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_136230_4_3_9"/>
    <dbReference type="OMA" id="DIWIHGK"/>
    <dbReference type="OrthoDB" id="1944396at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035895">
        <property type="entry name" value="HPr-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55594">
        <property type="entry name" value="SSF55594"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="81" mass="9276" checksum="6C0DB944BBFF1759" modified="2011-01-11" version="1">MMTPIKVKNVKDIEKINQIVSNYTYDIWIHGKSGMADAKSILGMYVLKLDEPLTLVVPDNVNPKKLFKDLEEFIHFPAQAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDU9</accession>
    <name>E3EDU9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydrolase TatD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yabD</name>
        <name evidence="1" type="ORF">PPSC2_00135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54015.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13150"/>
    <dbReference type="EnsemblBacteria" id="ADO54015">
        <property type="protein sequence ID" value="ADO54015"/>
        <property type="gene ID" value="PPSC2_00135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.26"/>
    <dbReference type="eggNOG" id="COG0084">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031506_4_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004536">
        <property type="term" value="F:deoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01310">
        <property type="entry name" value="TatD_DNAse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018228">
        <property type="entry name" value="DNase_TatD-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015991">
        <property type="entry name" value="Hydrolase_TatD-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001130">
        <property type="entry name" value="TatD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01026">
        <property type="entry name" value="TatD_DNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005902">
        <property type="entry name" value="DNase_TatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00010">
        <property type="entry name" value="TIGR00010"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01137">
        <property type="entry name" value="TATD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01090">
        <property type="entry name" value="TATD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01091">
        <property type="entry name" value="TATD_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54015.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="29245" checksum="CD1AC49814869979" modified="2015-05-27" version="2">MKTLDLFDTHTHLDAPQFDEDREEVIARAVESGVTRMINIGFNRETIPSTMKLAETYDFIYAAVGWHPQDAITMQEGDLEWIASLCSHKKVVAIGEIGLDYYWDTSPKDVQQRVLRNQIGLARELKMPIVIHNRDAHEDIVRILREEKAGEIGGVMHSFSGSWETAKMVLDMGFHLSFGGPITFKNAKQPKEVLAQVPLNRLLIETDAPYLTPHPFRGKRNESAHVRLVAEAAAQIKGITVEELVSITTQNALERFDIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDV6</accession>
    <name>E3EDV6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">4-diphosphocytidyl-2-C-methyl-D-erythritol kinase</fullName>
            <shortName evidence="9">CMK</shortName>
            <ecNumber evidence="2 9">2.7.1.148</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">ispE</name>
        <name evidence="12" type="ORF">PPSC2_00170</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18437"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57823"/>
            <dbReference type="ChEBI" id="CHEBI:57919"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.148"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 3/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the GHMP kinase family. IspE subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.148" evidence="2 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368672.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13185"/>
    <dbReference type="EnsemblBacteria" id="ADO54022">
        <property type="protein sequence ID" value="ADO54022"/>
        <property type="gene ID" value="PPSC2_00170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.33"/>
    <dbReference type="eggNOG" id="COG1947">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053057_1_1_9"/>
    <dbReference type="OMA" id="RWPSPAK"/>
    <dbReference type="OrthoDB" id="1938933at2"/>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00094"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050515">
        <property type="term" value="F:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00061">
        <property type="entry name" value="IspE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013750">
        <property type="entry name" value="GHMP_kinase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006204">
        <property type="entry name" value="GHMP_kinase_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004424">
        <property type="entry name" value="IspE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43527:SF2">
        <property type="entry name" value="PTHR43527:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08544">
        <property type="entry name" value="GHMP_kinases_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00288">
        <property type="entry name" value="GHMP_kinases_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF010376">
        <property type="entry name" value="IspE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00154">
        <property type="entry name" value="ispE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="6 9 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GHMP_kinases_N" evidence="10">
        <location>
            <begin position="86"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP_kinases_C" evidence="11">
        <location>
            <begin position="216"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="10"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="94"/>
            <end position="104"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00032554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="30942" checksum="7A094EB512028644" modified="2011-01-11" version="1">MKIYEKAPAKINLMLDVLRKRDDGYHEVEMIMTMVDLSDRLTMSELPRDTIIISSQAGYIPLDEKNLAFQAARLIKERYNVSTGVHIHLDKHIPVAAGLAGGSSDAAAALRGLNKLWKLGISDAELRVLGAELGSDVPFCITGGTALASGRGELLKPLPNPPQCWVILAKPPINVSTAEVYGRVKADQITHHPSARQMEQAIRNASFTDVCNTLGNVLEDVTLKLYPEVEHLKNSMIRLGADGVLMSGSGPTVFGLVSKEAKVPRIYNGLRGFCKDVYAVRLLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE63</accession>
    <name>E3EE63_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemical-damaging agent resistance protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yceE2</name>
        <name evidence="3" type="ORF">PPSC2_04915</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CAPAB/TerDEXZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369619.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17810"/>
    <dbReference type="EnsemblBacteria" id="ADO54986">
        <property type="protein sequence ID" value="ADO54986"/>
        <property type="gene ID" value="PPSC2_04915"/>
    </dbReference>
    <dbReference type="GeneID" id="66573977"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.990"/>
    <dbReference type="eggNOG" id="COG2310">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055120_2_0_9"/>
    <dbReference type="OMA" id="FFNNKQT"/>
    <dbReference type="OrthoDB" id="1437267at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06974">
        <property type="entry name" value="TerD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003325">
        <property type="entry name" value="TerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02342">
        <property type="entry name" value="TerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TerD" evidence="2">
        <location>
            <begin position="1"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="20881" checksum="3D6EEB012C2FFA52" modified="2011-01-11" version="1">MTISLSKGQRIDLTKTNPGLTRVVVGLGWDTNKYSGGAEFDLDASAFLLYEDGKAKAADDFVFYNNPTGGAGAVTHTGDNRTGEGDGDDEQIIIDFAKIPANIHRIGITVTIYDYEARAQNFGQVSNAFVRVVDAATDREVLRYDLGEDFSTETAVVFCEFYRHNADWKFQAIGSGFAGGLGALAKNYGLDAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE99</accession>
    <name>E3EE99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Protein-L-isoaspartate O-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ereB1</name>
        <name evidence="1" type="ORF">PPSC2_05085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55022.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1040"/>
    <dbReference type="EnsemblBacteria" id="ADO55022">
        <property type="protein sequence ID" value="ADO55022"/>
        <property type="gene ID" value="PPSC2_05085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1030"/>
    <dbReference type="eggNOG" id="COG2312">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026490_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14728">
        <property type="entry name" value="Ere-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007815">
        <property type="entry name" value="Emycin_Estase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014622">
        <property type="entry name" value="UCP036794_erythomycin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05139">
        <property type="entry name" value="Erythro_esteras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036794">
        <property type="entry name" value="UCP_erythr_ester"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55022.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="425" mass="47631" checksum="11A5F828EAA7FCF9" modified="2015-05-27" version="2">MKELNALFIPLDGMENLDRMVKAIGDADIVLLGEASHGTSDFYRVRAELSKKLITSKGFNIIGVEGDWPSAYRVNRYVKGMEGADSSAADALGDFTRWPTWMWANTDIRDFTEWLKEYNEANHGGGSVRAKVGFYGIDMYSLWESMEEIIGYLEETNSPQLKQARKTYACFDPYSRDHQSYGIAAGLLSESCEKEVVELLQQMQSRRMAYPGSEEELNAEVNMLVTSSSEAYYRTMVRGGPQSWNIRDKHMVESLKRIMSYYGASAKAIVWEHNTHIGDARATDMMADGMVNVGQLLREDPEHRVFAIGFGTYQGEVLAGRAWGSPVEKMTVPPGQPESWEYYMHQAGGGRDGMIMLSDASSMLHTTIGHRAIGVVYEPAHERFGNYVPSSMADRYNAFVHLDRTTALQPLPILQPVATDALFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB3</accession>
    <name>E3EEB3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Beta-fructosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sacC2</name>
        <name evidence="7" type="ORF">PPSC2_05155</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369669.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18080"/>
    <dbReference type="CAZy" id="CBM66">
        <property type="family name" value="Carbohydrate-Binding Module Family 66"/>
    </dbReference>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55036">
        <property type="protein sequence ID" value="ADO55036"/>
        <property type="gene ID" value="PPSC2_05155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1044"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_265085_0_0_9"/>
    <dbReference type="OMA" id="RIMLAWM"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010496">
        <property type="entry name" value="3-keto-disaccharide_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06439">
        <property type="entry name" value="DUF1080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="4">
        <location>
            <begin position="349"/>
            <end position="662"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="6">
        <location>
            <begin position="666"/>
            <end position="820"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1080" evidence="5">
        <location>
            <begin position="925"/>
            <end position="1083"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF06439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1085" mass="121052" checksum="1E1F964588A2465A" modified="2011-01-11" version="1">MRIKLTNTRMNLTDWQIKGQGHIEDNVQGLLLRSEPQENVMAMSATMSEDFTFEADVMVTDLQADAALVFRSSRDGWFSYMLQIVPSAGLVRLRDAAGDIERLKEERPIELQKGDIYHLKVKVEGPHLKVYWDEGYHPIIDVVDTTYTSGYLGLNVWNGAALFQNIQVSDMDTNVGEMLLIRGKWQPDLKGQRAEETSMEGALKIYDTAAADLVMEGSVTLNSSQPGMEAGLFFRGNQKGTEGYVASVQGEDHQVRVHLKKANGTLVASSAMPYLDTSGSKHSLEIIAHGERIRVFVDGYTPAAIDIVDNSYSSGFIGIKATGGTAYFQDLYLTPVSNYYTEKYRPQYHYSPARGSASDPNGLVYFEGEYHLFHQDGGQWAHAVSLDLLDWKRLPLALKWNDLGHIWSGSAVADLTNTSGLFSDYGGKGLVAYYTSYNPDQPKGNQRIGLAYSTDRGRTWQYSEDRSIVIENPGQSENDPGNWDFRDPKVVWDEAHQRWIMVVSGGDHIRFFTSANLLDWSWTDNFGYGDYIRGGVWECPDLFPLPVDKGNTSKWVLMISTGASTNTQGSDAEYFIGELTSDGKFQNDLPPGKVLKTDWGKEFYASMSFTNIPGGRRIMLAWMTNWDYPFSFPTSSWKGQFSIARELSLKTTREGIRLIQHPISELTSLRSHLFSLDHESITESSPNILEGLNAGAYEIEAEFEFPSVGMASTFGFYVREGGEQRTAVGYKTDVQQMFVNRADSGFADFSPLFSTFHEASLAPVGNRIQMRIFVDESSVEVFGNHGEVVFSDLIFPDSARRGMSFYTQGGEVKVVSLRVYALRNSWRVTEASPIRLMMDYTQLELAEGQSKRLYASVEDHSGRKGHLLNWESSNPAVVKVIVSNEGFATVEALFPGEAVVTASIPGDTVRASTSVTVHGGMFYTNLSGWKPDVSASRWMVTADGMRGSYISDANYMASEQAKDFTYEADMKLDGNGSAGSMIFRANADGSSGYYLNLDPNMKSIRLFYKKEGRFEEQQVLTKVPRFVLPGVTYHIKIQAKGLRLRIEIDDEQVIDLEDGTFAAGHFGINVFGGQAFYQNVRVEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEZ2</accession>
    <name>E3EEZ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lysR5</name>
        <name evidence="3" type="ORF">PPSC2_00630</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368760.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13620"/>
    <dbReference type="EnsemblBacteria" id="ADO54115">
        <property type="protein sequence ID" value="ADO54115"/>
        <property type="gene ID" value="PPSC2_00630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.124"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="TCHFGQA"/>
    <dbReference type="OrthoDB" id="1439189at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="296" mass="33076" checksum="35E2232002281DEB" modified="2011-01-11" version="1">MELRHLKYFLAIADAGQITAAAKKLQIAQPPLSQQLMQLEEELGVKLVNRGSRSIQLTEAGIILRNRAKQILELTDATTREINDFAMGMKGTLTIGTVSSSGATLMKDRLSEFHKTYAGVKFEIHEGNTFRILDLLNKGIVEVGIVRTPFNTAGLGCRYASTEPMVAVMTEEYDWNPEQKTISLAELKNRPLIIYRRFEQLIHDTCMKHGFEPNIFCKNDDARTTLHWANEGLGIGMISRSALSLGSNNHLIVKEISCEELHTRVAAVWLKDKYMSSLASRFIESFSQASSAADLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF50</accession>
    <name>E3EF50_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 14">S-ribosylhomocysteine lyase</fullName>
            <ecNumber evidence="4 14">4.4.1.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12 14">AI-2 synthesis protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13 14">Autoinducer-2 production protein LuxS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14 15" type="primary">luxS</name>
        <name evidence="15" type="ORF">PPSC2_03025</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11 14">Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 14">
            <text>S-(5-deoxy-D-ribos-5-yl)-L-homocysteine = (S)-4,5-dihydroxypentane-2,3-dione + L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:17753"/>
            <dbReference type="ChEBI" id="CHEBI:29484"/>
            <dbReference type="ChEBI" id="CHEBI:58195"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
            <dbReference type="EC" id="4.4.1.21"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
        <text evidence="14">Binds 1 Fe cation per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 14">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the LuxS family.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.21" evidence="4 14"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369209.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EF50"/>
    <dbReference type="STRING" id="1406.LK13_15840"/>
    <dbReference type="EnsemblBacteria" id="ADO54570">
        <property type="protein sequence ID" value="ADO54570"/>
        <property type="gene ID" value="PPSC2_03025"/>
    </dbReference>
    <dbReference type="GeneID" id="66574364"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.578"/>
    <dbReference type="eggNOG" id="COG1854">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107531_2_0_9"/>
    <dbReference type="OMA" id="GPMGCLT"/>
    <dbReference type="OrthoDB" id="1779617at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043768">
        <property type="term" value="F:S-ribosylhomocysteine lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009372">
        <property type="term" value="P:quorum sensing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00091">
        <property type="entry name" value="LuxS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037005">
        <property type="entry name" value="LuxS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003815">
        <property type="entry name" value="S-ribosylhomocysteinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35799">
        <property type="entry name" value="PTHR35799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02664">
        <property type="entry name" value="LuxS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006160">
        <property type="entry name" value="AI2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01487">
        <property type="entry name" value="LUXSPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="SSF63411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 14" id="KW-0071">Autoinducer synthesis</keyword>
    <keyword evidence="9 14" id="KW-0408">Iron</keyword>
    <keyword evidence="10 14" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 14" id="KW-0673">Quorum sensing</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="14">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="58"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000297"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00031777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO54570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="17328" checksum="A8B92C76E74D40BE" modified="2011-01-11" version="1">MAKVESFQLDHTIVKAPYVRAAGVEHDEKGSTVQKYDLRFLQPNEDALPTAAVHTLEHLLATYLRDEIKGIIDISPMGCRTGFYLILWNEHEPEEIALALEKTLKRILETTEVPAVTALECGNYKDHSLFSAQEYVKIVLEAGISRDPFKRVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF79</accession>
    <name>E3EF79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Diacylglycerol glucosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugtP1</name>
        <name evidence="7" type="ORF">PPSC2_03160</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyltransferase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369237.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15970"/>
    <dbReference type="CAZy" id="GT28">
        <property type="family name" value="Glycosyltransferase Family 28"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54599">
        <property type="protein sequence ID" value="ADO54599"/>
        <property type="gene ID" value="PPSC2_03160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.605"/>
    <dbReference type="eggNOG" id="COG0707">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028367_0_1_9"/>
    <dbReference type="OMA" id="NIPYMLT"/>
    <dbReference type="OrthoDB" id="1165736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009247">
        <property type="term" value="P:glycolipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009695">
        <property type="entry name" value="Diacylglyc_glucosyltr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06925">
        <property type="entry name" value="MGDG_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MGDG_synth" evidence="6">
        <location>
            <begin position="19"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_tran_28_C" evidence="5">
        <location>
            <begin position="236"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="42791" checksum="E6939BCD037E7AA9" modified="2011-01-11" version="1">MEVSAPKILILYASYGEGHVQAARAIMDSLRRLGHCEVQLLDLMAESHPWLNGLTKFVYMQSFKTIPQLYGWVYNITRGMQAKSAFGHVLHSFGMRQLALTLKKELPDLVIHTFPQLALPALRRKMGMNLPIVNVVTDFDLHGRWLHPDIDRYYVATEDLQQEAAQRGIPIERIAATGIPIHASFYNLSVNEVPDQQQVIPPLQTETTTLLIMAGAYGVLSGILDICRHLSRLPQLRLLIVCGRNQQLKAELDALYADHPDIYTYGFVGYVPALMRASNLVITKPGGITLSESIASGLPILVFKPVPGQELNNALYLQQKGAARIARTTEELIQHCLDLISTPSLAKEMKQAIELLRKPHPADQIAEDILLQLVDKRTSVRTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFD0</accession>
    <name>E3EFD0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369726.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55093">
        <property type="protein sequence ID" value="ADO55093"/>
        <property type="gene ID" value="PPSC2_05405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1096"/>
    <dbReference type="eggNOG" id="ENOG50305US">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1676138_0_0_9"/>
    <dbReference type="OMA" id="NHHLNEK"/>
    <dbReference type="OrthoDB" id="1696899at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17468" checksum="25C8E4E252628F9B" modified="2011-01-11" version="1">MKKQWKLTAAILYGGVMMFGATSAAGAYSMESEHSLQALTPNNSVQGEAQQWNVEPQDDDGHGHVHRHRHGKRPGGLNHHLNEKVARLLGITPVQLEKELGQGKSLAEVAKSKGIQEDQLIDKLKNEMTVDLKRLVNRKGPITFDRKSGTSNEAQLKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFF6</accession>
    <name>E3EFF6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phospholipid phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">epsA</name>
        <name evidence="4" type="ORF">PPSC2_05535</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369752.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18430"/>
    <dbReference type="EnsemblBacteria" id="ADO55119">
        <property type="protein sequence ID" value="ADO55119"/>
        <property type="gene ID" value="PPSC2_05535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1125"/>
    <dbReference type="eggNOG" id="COG0671">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4625">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016419_1_0_9"/>
    <dbReference type="OMA" id="YKYARPY"/>
    <dbReference type="OrthoDB" id="404391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003993">
        <property type="term" value="F:acid phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03397">
        <property type="entry name" value="PAP2_acid_phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001011">
        <property type="entry name" value="Acid_Pase_classA_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013425">
        <property type="entry name" value="Autotrns_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12951">
        <property type="entry name" value="PATR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02601">
        <property type="entry name" value="autotrns_rpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168183" evidence="2">
        <location>
            <begin position="30"/>
            <end position="589"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="3">
        <location>
            <begin position="176"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="589" mass="62859" checksum="5F172053C7BFA804" modified="2011-01-11" version="1">MKLLRKPLSVALLSLPLLLGSLGGSYASAATLPTTVTPTEPSWGYFVDHYKNNSAANKTESSNPTLGLLSEFNRLWTPGATWDTGTKLNSNVLDANIQKVIDIAARRTSSEADAAYLDDRRNQSYSVIDGLGSLTDVYRKKAGATTTINDVPADATTKKYEDEGTNAGDTSSSLGNVVNLVNTLRGDYSTTNPAKSYFSYPRPFRWSDNSVVVPSLIPALKSDATNDGGFPSGHTNAAYLSSIAMAYAMPERYQELLTRASELGNNRVVAGMHSPLDVMGGRVMATAMAASILSDPANSSLKKAAHQDAHEQLLSQKGTALDRFSNYATNKKNYNQRLTYGFSPINPTTKPMTVPKGAEVLLETRLPYLDSTQRRWVLATTGIPSGYPVLDDAEGWGRLNLFSAADGYGAFVNNVTVNMDASKGGFNALDRWRNNISGVGKLTKKGTGTLKLMGSNVYSGGTQIDQGILEGNSEAAFGSGAVTNNGGTLLKNNSGKLIVGGNYKQTAKGKLELNLGSKNDVLKIKGTAQLNGKLRLNFSNKYVPASGATILTYGKRNGAFSSIEAAGLPSNYKVKVVYTANSVQLKVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN1</accession>
    <name>E3EFN1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spore coat protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370149.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20370"/>
    <dbReference type="EnsemblBacteria" id="ADO55522">
        <property type="protein sequence ID" value="ADO55522"/>
        <property type="gene ID" value="PPSC2_07390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1528"/>
    <dbReference type="eggNOG" id="COG2334">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_841561_0_0_9"/>
    <dbReference type="OMA" id="PREAWHA"/>
    <dbReference type="OrthoDB" id="1003984at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0946">Virion</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="34"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="336" mass="39724" checksum="87CFF09F05441939" modified="2011-01-11" version="1">MAKSYTKAQIREITRRFGLIPLKSSLVSSLYRKNAVIQVKTKKGTYALKPFSRSKMARSNTIQQMERAASYIRLLKKRKYTYMPTWLPTHSGKLWTLYQETPFYVSQWIKGRGLETAEDFEKLGLALATLHATSTGLHRMEKGKSPPTIQQLRIWKNQDRLFQKKMIKISRQNKEYRNWYNTHGKDCKRLSRRAWKDLQDASIIRLLRTERRHPSLIHSDITTPNVIISDDGHLKIIDWDRAKIGSVYADLAKALMNTTQFNPEFVQSLLRGYQKRKPLSRTERKIVTALYKLPREAWHASRHPNRSRDREILDNWDQSWPLRLQIIHILQEWARV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN2</accession>
    <name>E3EFN2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ykoJ</name>
        <name evidence="3" type="ORF">PPSC2_07395</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370150.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20375"/>
    <dbReference type="EnsemblBacteria" id="ADO55523">
        <property type="protein sequence ID" value="ADO55523"/>
        <property type="gene ID" value="PPSC2_07395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1529"/>
    <dbReference type="eggNOG" id="COG3212">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067057_2_1_9"/>
    <dbReference type="OMA" id="YNAFAKE"/>
    <dbReference type="OrthoDB" id="2038509at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025711">
        <property type="entry name" value="PepSY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03413">
        <property type="entry name" value="PepSY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169187" evidence="1">
        <location>
            <begin position="26"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="PepSY" evidence="2">
        <location>
            <begin position="38"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="PepSY" evidence="2">
        <location>
            <begin position="117"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="19753" checksum="94CEEBEA576FCAF5" modified="2011-01-11" version="1">MKKNYTLGIIAATVLLGVTATGVSANAVWAAKPTGLIGATTAANIAKKAVGNHAQVEDVELERKNGKVYYEVDLQQGDKDWDIEVDAYTGKTIRSHSELDHDSNDESSLYKPNHVTLTEKQAGQIALKHVPGSTLLSSKLDKEDGQFIYEVKVLTNEGTVELEIHASSGAIVDTDEDDDNNDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFY8</accession>
    <name>E3EFY8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">3-oxoacyl-[acyl-carrier-protein] synthase 3</fullName>
            <ecNumber evidence="9">2.3.1.180</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">3-oxoacyl-[acyl-carrier-protein] synthase III</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Beta-ketoacyl-ACP synthase III</fullName>
            <shortName evidence="9">KAS III</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fabH</name>
        <name evidence="12" type="synonym">fabH3</name>
        <name evidence="12" type="ORF">PPSC2_09665</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>acetyl-CoA + H(+) + malonyl-[ACP] = 3-oxobutanoyl-[ACP] + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:12080"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9625"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78450"/>
            <dbReference type="EC" id="2.3.1.180"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="9">The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the thiolase-like superfamily. FabH family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.180" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370638.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22130"/>
    <dbReference type="EnsemblBacteria" id="ADO56021">
        <property type="protein sequence ID" value="ADO56021"/>
        <property type="gene ID" value="PPSC2_09665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2037"/>
    <dbReference type="eggNOG" id="COG0332">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039592_3_1_9"/>
    <dbReference type="OMA" id="YAKHKGK"/>
    <dbReference type="OrthoDB" id="872193at2"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033818">
        <property type="term" value="F:beta-ketoacyl-acyl-carrier-protein synthase III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01815">
        <property type="entry name" value="FabH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013751">
        <property type="entry name" value="ACP_syn_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004655">
        <property type="entry name" value="FabH_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08545">
        <property type="entry name" value="ACP_syn_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00747">
        <property type="entry name" value="fabH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 9" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 9" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACP_syn_III" evidence="11">
        <location>
            <begin position="110"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="domain" description="ACP_syn_III_C" evidence="10">
        <location>
            <begin position="240"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="region of interest" description="ACP-binding" evidence="9">
        <location>
            <begin position="257"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="34985" checksum="F9668DF2351DF5DC" modified="2011-01-11" version="1">MNKLRPVGVIGTGKYVPEKILTNKDLEEIVETSDEWIVSRTGIQERHIAAPEQATSDLAYEAAVKALESAGMTAQDLDLIIVATVTPDMAFPSTACILQDKLGAKGAAAFDLSAACSGFVYGLATATSFIKTGIYNNALIIGADCLSRITDYTDRNTCVLFGDGAGAVVIGEVPEGRGFQSFDLGAEGAGGTLLKLEAGGSRLPASADTLENKQHYIYMNGREVFKFAVRVMGTATVDVLEKAGMSKDDIDLFVPHQANIRIIQSAMQRLDLPEEKVVINVNKYANTSAASIPLALVEAAEEGRMKEGDRILMVGFGGGLTWGASVLIW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG36</accession>
    <name>E3EG36_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Flagellar basal body protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">flgE</name>
        <name evidence="5" type="ORF">PPSC2_09900</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370682.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2097"/>
    <dbReference type="EnsemblBacteria" id="ADO56069">
        <property type="protein sequence ID" value="ADO56069"/>
        <property type="gene ID" value="PPSC2_09900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2086"/>
    <dbReference type="eggNOG" id="COG4786">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013687_0_1_9"/>
    <dbReference type="OMA" id="MIQGDGF"/>
    <dbReference type="OrthoDB" id="704242at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="5" id="KW-0966">Cell projection</keyword>
    <keyword evidence="5" id="KW-0969">Cilium</keyword>
    <keyword evidence="5" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="3">
        <location>
            <begin position="5"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="4">
        <location>
            <begin position="188"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="272" mass="28475" checksum="501C8B4D7684EB27" modified="2011-01-11" version="1">MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTGFKSSRVMFKDILSQTSSGASASGEETAGSNAKQIGLGSTVSSIDTLHLPGSAMTTNNPTDLRLNGDGFFLVKMNADQEAPYLTRAGDFHIDGNRHLVTSDGFFVADSGGGVPITLADDVTAFSISQDGTIVQTLASGETDNATKIGVTKVINPEGLEKIGGSLYRATVNSGNEGEITAMEANSADDGTGAIISGQLEMSNVDLTGEFTEMIVAQRGFQANSRIITTSDEVLQEVVNLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB2</accession>
    <name>E3EGB2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Recombination protein RecR</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">recR</name>
        <name evidence="9" type="ORF">PPSC2_00730</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the RecR family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368785.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13720"/>
    <dbReference type="EnsemblBacteria" id="ADO54140">
        <property type="protein sequence ID" value="ADO54140"/>
        <property type="gene ID" value="PPSC2_00730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.147"/>
    <dbReference type="eggNOG" id="COG0353">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060739_1_0_9"/>
    <dbReference type="OMA" id="DVMAIEN"/>
    <dbReference type="OrthoDB" id="1661836at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01025">
        <property type="entry name" value="TOPRIM_recR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00017">
        <property type="entry name" value="RecR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000093">
        <property type="entry name" value="DNA_Rcmb_RecR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023627">
        <property type="entry name" value="Rcmb_RecR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023628">
        <property type="entry name" value="Rcmb_RecR_C4-type_Zn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015967">
        <property type="entry name" value="Rcmb_RecR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034137">
        <property type="entry name" value="TOPRIM_RecR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30446">
        <property type="entry name" value="PTHR30446"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02132">
        <property type="entry name" value="RecR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13662">
        <property type="entry name" value="Toprim_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00493">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111304">
        <property type="entry name" value="SSF111304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00615">
        <property type="entry name" value="recR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01300">
        <property type="entry name" value="RECR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5 7" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Toprim" evidence="8">
        <location>
            <begin position="80"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="7">
        <location>
            <begin position="57"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="199" mass="22166" checksum="B104EECE5F15FAE6" modified="2011-01-11" version="1">MHYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLKMKEDDVIDFAKALVNVKRNLHFCSVCGNITDTDPCRICQDKTRDASVICVVQDAKDLVAMERTKEFEGLYHVLHGAISPMEGIGPEDIKLKELLTRLSDERVKELILATNPNIEGEATAMYISRLVRPFEIKVTRIAHGLPVGGDLEYADEVTLSKALEGRRELN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGF5</accession>
    <name>E3EGF5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-335</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-335</name>
        <name evidence="1" type="ORF">PPSC2_00995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368826.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0196"/>
    <dbReference type="EnsemblBacteria" id="ADO54183">
        <property type="protein sequence ID" value="ADO54183"/>
        <property type="gene ID" value="PPSC2_00995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.187"/>
    <dbReference type="eggNOG" id="COG3501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030496_2_0_9"/>
    <dbReference type="OMA" id="SGWYCMP"/>
    <dbReference type="OrthoDB" id="1880900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="471" mass="53352" checksum="1C70475CB9F6BA16" modified="2011-01-11" version="1">MSLGYDQIQIYPFELVELEQLTLTKKINEHTRLYFTGIIPEDMQDSYVETTEKNTVIQVSQRNESGESKPLFSGIALSVEVKVVRDVYYLEVEAISHTYRMDIQQRTRSFQYTKMTIPQMLEQIGKDYEGLDVIDGATGGEQIGRLAIQYQETDWAFLRRMASRYHTSLMPVARFDSPKFYFGIEDSPAQVVLDHTRYTVRKQMLPFRYFQENEQAKVTENDFIFYEVETDEVLDLGAQMTFQGHSLYVVEAYTEMRQGLLRHQYVLASYKGLRQKSYYQEKLAGASLSGMVVDIRQDQVRIHLDCDEKQDVDKAHWFNYSTVYSAGGHTGWYVMPEKGDPVSLYFPGSREEDGIAGSAVRRAGRGGGHNKFSNPQMKIWRTPHGKEIRLGPDELVVTGKDGAIFIKLDDKEGIHIVSSKQVSISAGGNLSLSAGKTMSLSAGSELRMDCNGSHIQLSGSADMKGSEVKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK9</accession>
    <name>E3EGK9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ydeG1</name>
        <name evidence="9" type="ORF">PPSC2_03370</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369285.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0665"/>
    <dbReference type="EnsemblBacteria" id="ADO54648">
        <property type="protein sequence ID" value="ADO54648"/>
        <property type="gene ID" value="PPSC2_03370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.658"/>
    <dbReference type="eggNOG" id="COG0477">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047644_0_0_9"/>
    <dbReference type="OMA" id="QWHIVAM"/>
    <dbReference type="OrthoDB" id="1121832at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="98"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="123"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="155"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="195"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="248"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="283"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="312"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="337"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="375"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="403"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="31"/>
            <end position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="43563" checksum="65DAC18FF58D1EF0" modified="2011-01-11" version="1">MNLTNASQKKQALINSYVESSDKQKKLYRRTLITVIFSQIFGGAGLAAGVTVGALLAQDMLGTDKFTGVPTALFTLGSAVAALLVGRFSQRFGRRMGLGLGFIAGGVGAIGVVVAALMNSITLLLVSLLIYGSGTATNLQARYAGTDLANSKQRATAASMAMVFTTIGAVAGPNLVNVTGEFALSIGVPSLAGPFLLAAVAYTLAGIILLLLLHPDPLLVAKAVANQAAQGSQSSSDLEATRDGKKGITLGALIMIITQIVMVAIMTMTPVHMKHHGHGLGEVGLVIGFHIGAMYLPSLITGILVDKIGRIALALASAVTLLLAGVVAALAPTDSMVMLIVALSLLGIGWNFGLISGTALIVDSTTTSNQAKVQGAVDVLIALAGASGGALSGMIVANSSYSILSYAGGILALALLPIMLWMRPKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGQ9</accession>
    <name>E3EGQ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xkdM</name>
        <name evidence="1" type="ORF">PPSC2_05645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369776.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1163"/>
    <dbReference type="EnsemblBacteria" id="ADO55143">
        <property type="protein sequence ID" value="ADO55143"/>
        <property type="gene ID" value="PPSC2_05645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1149"/>
    <dbReference type="eggNOG" id="ENOG5032ISS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_139219_2_0_9"/>
    <dbReference type="OMA" id="GTMSGYK"/>
    <dbReference type="OrthoDB" id="1797994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018989">
        <property type="entry name" value="DUF2001"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038628">
        <property type="entry name" value="XkdM-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09393">
        <property type="entry name" value="DUF2001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="15277" checksum="D269F502A527D83C" modified="2011-01-11" version="1">MLDASRVILGTFGQAYIDGVWQTHINKLEASVEIDKRELNLVGNTWKVHKNGAKKGTGTMSGYKVTSDMIRRGFEKFDIISKLDDPESFGHERVRLIRCMPDKIQLANWTAGEEVPEETTFTFEGYELLDPIVAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGZ5</accession>
    <name>E3EGZ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DegV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">degV1</name>
        <name evidence="2" type="ORF">PPSC2_07550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370182.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20520"/>
    <dbReference type="EnsemblBacteria" id="ADO55555">
        <property type="protein sequence ID" value="ADO55555"/>
        <property type="gene ID" value="PPSC2_07550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1560"/>
    <dbReference type="eggNOG" id="COG1307">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048251_4_2_9"/>
    <dbReference type="OMA" id="GRCSGMQ"/>
    <dbReference type="OrthoDB" id="1288126at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003797">
        <property type="entry name" value="DegV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043168">
        <property type="entry name" value="DegV_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02645">
        <property type="entry name" value="DegV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00762">
        <property type="entry name" value="DegV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51482">
        <property type="entry name" value="DEGV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="31247" checksum="0AD2488D278FAB9A" modified="2011-01-11" version="1">MNKTKIFADSTSDVPAHWRQQYEISIVPLYTVFGDEALQDGVNIHPEQLFQRVSREGSLPRTAAPSPADFIQAFTPYIEQGDDILYISLSSELSSTYQNALLAASEFPEGRITVFDSLNLSCGFGLLVMKAARAAANGSTIEQIVDMLTATRPLIDTEFVIDTLEYLYKGGRCSGMQNLIGSLLKIRPVIKVIDGKMTPAYKVRGKREKALEQMLQNALNHRDLMDNDMIIVVHALAEEDALMLQARLKEETNAQEVLLTTAGCVISSHCGPQTIGIMYSKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH20</accession>
    <name>E3EH20_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Protein translocase subunit SecA</fullName>
            <ecNumber evidence="11">7.4.2.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">secA</name>
        <name evidence="15" type="synonym">secA1</name>
        <name evidence="15" type="ORF">PPSC2_07650</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell membrane</location>
            <topology evidence="11">Peripheral membrane protein</topology>
            <orientation evidence="11">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="11">Distribution is 50-50.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 11">Belongs to the SecA family.</text>
    </comment>
    <dbReference type="EC" id="7.4.2.8" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370207.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1603"/>
    <dbReference type="EnsemblBacteria" id="ADO55580">
        <property type="protein sequence ID" value="ADO55580"/>
        <property type="gene ID" value="PPSC2_07650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1585"/>
    <dbReference type="eggNOG" id="COG0653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005314_3_2_9"/>
    <dbReference type="OMA" id="WADHLAF"/>
    <dbReference type="OrthoDB" id="212453at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017038">
        <property type="term" value="P:protein import"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd18803">
        <property type="entry name" value="SF2_C_secA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01382">
        <property type="entry name" value="SecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000185">
        <property type="entry name" value="SecA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020937">
        <property type="entry name" value="SecA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011115">
        <property type="entry name" value="SecA_DEAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014018">
        <property type="entry name" value="SecA_motor_DEAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011130">
        <property type="entry name" value="SecA_preprotein_X-link_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044722">
        <property type="entry name" value="SecA_SF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011116">
        <property type="entry name" value="SecA_Wing/Scaffold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036266">
        <property type="entry name" value="SecA_Wing/Scaffold_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036670">
        <property type="entry name" value="SecA_X-link_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30612">
        <property type="entry name" value="PTHR30612"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07517">
        <property type="entry name" value="SecA_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01043">
        <property type="entry name" value="SecA_PP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07516">
        <property type="entry name" value="SecA_SW"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00906">
        <property type="entry name" value="SECA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00957">
        <property type="entry name" value="SecA_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00958">
        <property type="entry name" value="SecA_PP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81767">
        <property type="entry name" value="SSF81767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81886">
        <property type="entry name" value="SSF81886"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01312">
        <property type="entry name" value="SECA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51196">
        <property type="entry name" value="SECA_MOTOR_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 11" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-1278">Translocase</keyword>
    <keyword evidence="9 11" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 11" id="KW-0813">Transport</keyword>
    <feature type="domain" description="SECA_MOTOR_DEAD" evidence="14">
        <location>
            <begin position="5"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="12">
        <location>
            <begin position="89"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="13">
        <location>
            <begin position="416"/>
            <end position="581"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="105"/>
            <end position="109"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="494"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO55580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="758" mass="85033" checksum="CB390A9B48BCEC0A" modified="2011-01-11" version="1">MNLAVKLMQKFKDRDTQNKLKGYRDKAELIRKRNLEAWDDQRLKAESLRLKKEAKLGTPLDELLVDAYALVCEAAKRKLGLQPYDVQIMAAIALHDRFVIEQHTGEGKTLSAVMPAYLNALTGEGVHVLTFNDYLANRDAEWMGPIYRFLGLTVKSVQAGMSLSEKREAYATDITYVTAKEAGFDYLRDTITLSEADTVHRPFHYVIVDEADSLLLDEARVPLVIAGEPDSSGNDVIRFADVTRQLEQDKYYDFDEFKRNVYLNEAGAAKAESLLGCGNLYESHNSHLLSSLNCALYAETLLKKDVDYIVRDGKIELIDEYTGRVAENRHLPEGLQAALAAKEGLHSKAGGKILGTITLQHFISLYPKICGMTATAYASAMEFKEIYALQVVQIPPNRPNIRIDQPHRIYTHKEAKLKALVQEISSVHAMGRPILIGTSSVEESDMLAEALAVAGVPCHVLNAKNDVEEAEVIARAGEIGAVTVSTNMAGRGVDIRLGGGNPTQAEVVAKLGGLYVIGTHVNESVRIDDQLRGRSGRQGDPGASVFFVSLEDELLLRFGIDKAIRAHRQDETLEDPVLRSKIAHIQRVIMGQNFDIHQELNRYSDMVEEQRRILYEERLAILKGETPMSPSEQRVRLYYIDKFWADHLAYVSYLREGIHLESLASRNPIDEFHEQIIQAYEQIPAKINSESANMLVRLGSSNDPAKWEAFGLKSPSSTRTYIINDQYIQNMRSSWTAMTVFAFGIRKILRPIFKLSKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC9</accession>
    <name>E3EHC9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yobU</name>
        <name evidence="2" type="ORF">PPSC2_09195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370537.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21665"/>
    <dbReference type="EnsemblBacteria" id="ADO55920">
        <property type="protein sequence ID" value="ADO55920"/>
        <property type="gene ID" value="PPSC2_09195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1938"/>
    <dbReference type="eggNOG" id="COG3708">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1154827_0_0_9"/>
    <dbReference type="OMA" id="NGALGEY"/>
    <dbReference type="OrthoDB" id="1748122at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010499">
        <property type="entry name" value="AraC_E-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029442">
        <property type="entry name" value="GyrI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025868">
        <property type="entry name" value="Zn_ribbon_dom_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06445">
        <property type="entry name" value="GyrI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12674">
        <property type="entry name" value="Zn_ribbon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00871">
        <property type="entry name" value="AraC_E_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AraC_E_bind" evidence="1">
        <location>
            <begin position="94"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="28119" checksum="1378B2DB03B01ACF" modified="2011-01-11" version="1">MDKACQSCGMPLEHEDQYGTDAQHNNTDEYCKYCYKEGAFVQPDLTMEGMIQQCVPILVEEGMQAEEATSMLRNYLPRLKRWRSSEDTELPFDGPIREEYRGEIHLIGLKARTNNQKEQTSHGIIPSMWERFIGENVAGRIRGHEGLASVYGCYTDYENGALGEYTFFIGKEAAEDFQTPDELEELVIPAARYAIFQATHEPSSIFRVWQKIWAWAATGQGERTYTGDFEVYGNPDEPVLIYIAIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHF0</accession>
    <name>E3EHF0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphatidate cytidylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cdsA1</name>
        <name evidence="2" type="ORF">PPSC2_10055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370713.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22525"/>
    <dbReference type="EnsemblBacteria" id="ADO56103">
        <property type="protein sequence ID" value="ADO56103"/>
        <property type="gene ID" value="PPSC2_10055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2119"/>
    <dbReference type="eggNOG" id="COG0575">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037294_2_2_9"/>
    <dbReference type="OMA" id="FTFDEVG"/>
    <dbReference type="OrthoDB" id="1533756at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="28466" checksum="468C292B26CF39C9" modified="2011-01-11" version="1">MRQRLITGILAGIFFLAMVLWGGLAYHLLILVMALIGFYEFARMTQVSPFGGTALLGYVSILAFVFPYQPLGLHTPLSFASLLWLVMIAFMMITVGTKNKIPIQTVAILFLGTVYIGFGFSYIAESRHMEHGLLWTFLLLSCIWASDAGAYFVGKMVGKTKLWPAISPNKTVEGSIGGVVLALVIALVFAGLSGGLLPWGKAFGIGLSCAVVGQLGDLVQSAYKRVYGIKDSGNLLPGHGGILDRCDSWIVVFPFVHMLMLLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHI8</accession>
    <name>E3EHI8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0234 protein PPSC2_10230</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yitK</name>
        <name evidence="2" type="ORF">PPSC2_10230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0234 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370750.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22700"/>
    <dbReference type="EnsemblBacteria" id="ADO56141">
        <property type="protein sequence ID" value="ADO56141"/>
        <property type="gene ID" value="PPSC2_10230"/>
    </dbReference>
    <dbReference type="GeneID" id="66577869"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2156"/>
    <dbReference type="eggNOG" id="COG1666">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_099839_1_0_9"/>
    <dbReference type="OMA" id="SDFDRQE"/>
    <dbReference type="OrthoDB" id="1612988at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd11740">
        <property type="entry name" value="YajQ_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.860">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00632">
        <property type="entry name" value="UPF0234"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007551">
        <property type="entry name" value="DUF520"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035571">
        <property type="entry name" value="UPF0234-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035570">
        <property type="entry name" value="UPF0234_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036183">
        <property type="entry name" value="YajQ-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30476">
        <property type="entry name" value="PTHR30476"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04461">
        <property type="entry name" value="DUF520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89963">
        <property type="entry name" value="SSF89963"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="18504" checksum="A4098CD5EF1D4DA9" modified="2011-01-11" version="1">MASENSFDIVSKMDMQELTNAVHQTEREIETRFDFKGSKSSLKLEKDALTIASEDEYKLNAVIDILQSKMVKRGLSLKNVEFGKLEPASLGSVRQRLSLKQGIDQDNAKKINILIRDSKLKVKSQIQGDQIRVTGKNRDDLQAIIQLLRKADLPLELQFTNMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHU6</accession>
    <name>E3EHU6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative agmatine deiminase</fullName>
            <ecNumber evidence="2">3.5.3.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Agmatine iminohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aguA</name>
        <name evidence="3" type="ORF">PPSC2_11600</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>agmatine + H2O = N-carbamoylputrescine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:18037"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:58145"/>
            <dbReference type="ChEBI" id="CHEBI:58318"/>
            <dbReference type="EC" id="3.5.3.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the agmatine deiminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.12" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371043.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23970"/>
    <dbReference type="EnsemblBacteria" id="ADO56438">
        <property type="protein sequence ID" value="ADO56438"/>
        <property type="gene ID" value="PPSC2_11600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2453"/>
    <dbReference type="eggNOG" id="COG2957">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037682_0_0_9"/>
    <dbReference type="OMA" id="WCRDHGP"/>
    <dbReference type="OrthoDB" id="771174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047632">
        <property type="term" value="F:agmatine deiminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004668">
        <property type="term" value="F:protein-arginine deiminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009446">
        <property type="term" value="P:putrescine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01841">
        <property type="entry name" value="Agmatine_deimin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017754">
        <property type="entry name" value="Agmatine_deiminase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007466">
        <property type="entry name" value="Peptidyl-Arg-deiminase_porph"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31377">
        <property type="entry name" value="PTHR31377"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04371">
        <property type="entry name" value="PAD_porph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Amidino-cysteine intermediate" evidence="2">
        <location>
            <position position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="38365" checksum="BE35AC94488D3FD5" modified="2011-01-11" version="1">MQIKDSHYKMPPEWAPHERTYISWPVQSSMVYPEMHAEVSKGYAEIISAMAEFEPVTVVVNPDDLESVKALELGERVELLPIEHSDAWLRDNGPTFLTDEHGQLAGVNWMFNAWGGKYAPWDLDDQVAPQILDKLGVPRLDAPLVMEGGSLHVDGEGTLITTEECLLNPNRNPELSREEIERYVCEYTGAEKIIWLKRGLSGDETDGHVDNIACFAAPGKVIMQVCDDPEDENYEITQENLRILEQATDAKGRKLEVIQIGQPPRVDYEDSRLTLSYINFYFVNGGIILPVFGGTAAESDLAAQQVLAKVFPNRKIRTVDGMAVIREGGNVHCTTQQMPAVKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHV6</accession>
    <name>E3EHV6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fhuG3</name>
        <name evidence="8" type="ORF">PPSC2_11640</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24015"/>
    <dbReference type="EnsemblBacteria" id="ADO56448">
        <property type="protein sequence ID" value="ADO56448"/>
        <property type="gene ID" value="PPSC2_11640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2461"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_2_9"/>
    <dbReference type="OMA" id="NLNGRTW"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="117"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="154"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="242"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="284"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="315"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="35946" checksum="A71C25891E028337" modified="2011-01-11" version="1">MKLSRNSRGISIILLLTMLTLLVAILSMNVGKMNLSPLEVFKVIIGEGTNKQNLIVFEFRLPRIVLSVLVGIGMGISGCIMQSLLKNDMASPGTLGISSGSGLFVLLYITLFASEGLLSPIILPGLAFAGGLTAAFLIFMFAFRRGRDISPTGLILTGVAMGSGYSALSLILTLRLDKQQYDFALRWQAGDLWGDDWSYIMVLLPWVLIICLYVFYRSNTLNTLNLGNQTASGLGVAIKREFIGLTIAAVALASGSVALGGNFFFVGMVSPHLARRLVGPNHKLLLPTTALVGALVILIADTLTRTISFGADIPTGIIITILVTPYFLYLLSKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHW9</accession>
    <name>E3EHW9_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371066.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2490"/>
    <dbReference type="EnsemblBacteria" id="ADO56461">
        <property type="protein sequence ID" value="ADO56461"/>
        <property type="gene ID" value="PPSC2_11700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2475"/>
    <dbReference type="eggNOG" id="ENOG5032TVM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_157174_0_0_9"/>
    <dbReference type="OMA" id="DLYYGKW"/>
    <dbReference type="OrthoDB" id="1999242at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10496" checksum="BC221DF586866ABD" modified="2011-01-11" version="1">MSILEDLYYGKWYPSQRTKPKNPELELVHQKISASMKALKARLSEQDYELIEELSDLNDVLISILSASDYISGYKAGALTIIEIIDGINYRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI72</accession>
    <name>E3EI72_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore gernimation protein GerQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yraD1</name>
        <name evidence="3" type="ORF">PPSC2_03795</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Spore coat</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CotF family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369376.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16610"/>
    <dbReference type="EnsemblBacteria" id="ADO54740">
        <property type="protein sequence ID" value="ADO54740"/>
        <property type="gene ID" value="PPSC2_03795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.749"/>
    <dbReference type="eggNOG" id="COG5577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_163858_2_0_9"/>
    <dbReference type="OMA" id="MIENEMY"/>
    <dbReference type="OrthoDB" id="1952177at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012851">
        <property type="entry name" value="Spore_coat_CotF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39183">
        <property type="entry name" value="PTHR39183"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07875">
        <property type="entry name" value="Coat_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00024344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11017" checksum="CEF80E1944C47A2A" modified="2011-01-11" version="1">MNSFIENMTGTTPMTDQVIASDLLISAKSGIKNYAAALTESTSSEVRNVLCDQLSKAVNLHEQIFNYMKNNGYYNAYDPDQQIQMDIQNADKALSLSKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIE8</accession>
    <name>E3EIE8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polysaccharide deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pdaC</name>
        <name evidence="3" type="ORF">PPSC2_06165</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369892.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19125"/>
    <dbReference type="EnsemblBacteria" id="ADO55261">
        <property type="protein sequence ID" value="ADO55261"/>
        <property type="gene ID" value="PPSC2_06165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1269"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021264_0_1_9"/>
    <dbReference type="OMA" id="NHAMRDE"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168943" evidence="1">
        <location>
            <begin position="31"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="2">
        <location>
            <begin position="60"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="29472" checksum="0D9696AD4A5AB034" modified="2011-01-11" version="1">MKYNRLLCAGIAVSLLCISSCPTAYTNAQNTSYASPAPTKGRAYYEERGDIVWEVPTHRKLIALTFDDGPDESNTPAILDLLQKYDAKATFFVVGSRVEKLPHLVKREREEGHEVGNHTFLHSSFQYISRNKALSELDQGQTSIVQATGAGTHLFRPPGGSYNDSLVKLSKEKGLKIILWSWHQDTLDWRKPGVHRIADKVLRNARNGDIVLMHDYVHQSTQTVEALKIILPELKKRGYSFVTVSELLSNREKPDGLIEVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIF8</accession>
    <name>E3EIF8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">HlyD1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hlyD1</name>
        <name evidence="4" type="ORF">PPSC2_06205</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369902.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19160"/>
    <dbReference type="EnsemblBacteria" id="ADO55271">
        <property type="protein sequence ID" value="ADO55271"/>
        <property type="gene ID" value="PPSC2_06205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1279"/>
    <dbReference type="eggNOG" id="COG0845">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_6_1_9"/>
    <dbReference type="OMA" id="DAWAVFQ"/>
    <dbReference type="OrthoDB" id="1680841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="3">
        <location>
            <begin position="50"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="150"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="271"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="454" mass="47401" checksum="41B34E13E60F7B67" modified="2011-01-11" version="1">MKAKKYAIYIVLIILIAVGIYALTALPRGSSSLSADESSSIPTAYVESDTLNASFKMAGRIDQMLVNEGDKVKKGQVLAHLESRELEDKVKQAQAALLAAKSNVSKAKASVLQAQAGVGQAQATVSAAQAKKSQGTTAVSVTAEASSSQIEQAKAASNAAKAKLDALKSGARPQELEQLQASVKVAKETLDLTVKNLERAKKLQEAGAATQASLDQATLEHQQAVAKYNAESQKLDMAREGSRKEEITAAEAQYRQALAAVKEAQAGAGKVAVQQEDVKAAQASVEQAQSAVKAAQSTVEQAQSAVEGANAQVAQAEAALQEAQTYLSYTTLRASEDGIIKSKSLSLGEMASAGFPVYTIETSTQRWAKFYVPETSLNGLQAGDTVQIKLLSGGKELKGKVILLESAADFAIQKPSQSSGDKDVRSFGVKVALPDLAASVPTGSTVLFTGKGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIF9</accession>
    <name>E3EIF9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yhiH1</name>
        <name evidence="7" type="ORF">PPSC2_06210</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369903.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19165"/>
    <dbReference type="EnsemblBacteria" id="ADO55272">
        <property type="protein sequence ID" value="ADO55272"/>
        <property type="gene ID" value="PPSC2_06210"/>
    </dbReference>
    <dbReference type="GeneID" id="66573699"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1280"/>
    <dbReference type="eggNOG" id="COG0842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039483_8_4_9"/>
    <dbReference type="OMA" id="ANIYRLG"/>
    <dbReference type="OrthoDB" id="1552415at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="191"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="244"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="363"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="45444" checksum="AB7F37F2D61C20A9" modified="2011-01-11" version="1">MQDSQERLRIRDVFREEWLSIFRDRRFMAILLITPIVYTILFGFLYSHQRITEMPVTVYDGDNSQLSRQIIQAFDATDSFAVTRQVTNQDDVVRQVETGEAKVGIVIPDNFTTRLKHGENPPVLTLIDGSNMMYSNSASRIANQVISSVSAGVSLNSMKQKGMNADQAASTLTTIPFRSRVLFNPVYDYKLFMPLGVISAALQQCLLLGIALSCTRDKEAGTWGRFGAWKNTPWRLAIAKLAPYYAAGAFNVLTVFSISALCFDIPFRGQVLPLILVSLVFNFALCGLGFLFSLFSKTRVDATQTLMLIAVPSFMLSGYTWPLEAMPGFLRGLAEILPLTYYLDAVRNITLKGLDITYIFKDLIALGVIGCVSLLVAFVIYPLFFRQHQTTAQHADMPVQEGFTLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIJ0</accession>
    <name>E3EIJ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amidase</fullName>
            <ecNumber evidence="2">3.5.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gatA1</name>
        <name evidence="2" type="ORF">PPSC2_07840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370255.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20640"/>
    <dbReference type="EnsemblBacteria" id="ADO55628">
        <property type="protein sequence ID" value="ADO55628"/>
        <property type="gene ID" value="PPSC2_07840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1633"/>
    <dbReference type="eggNOG" id="COG0154">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009600_14_1_9"/>
    <dbReference type="OMA" id="DMRSNNY"/>
    <dbReference type="OrthoDB" id="1239251at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004040">
        <property type="term" value="F:amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043864">
        <property type="term" value="F:indoleacetamide hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidase" evidence="1">
        <location>
            <begin position="33"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="490" mass="54255" checksum="7487848B35023464" modified="2011-01-11" version="1">MEPNFKLKNLNGEEVTIFELQEAMRKGEVTSRELVMYYMYRIATHDQSGQNINSIMEINPDAIFIAEALDKERKTRGIRGYLHGIPVLLKENIETKDKMRTSAGALALENNISETDAFLVKKLREAGAIILGKTNMTELANGVSSKVCAGYSSKGGQVLNPYGDFFVGGSSTGSAVAVASNFTSVAVGTETSASILSPAIQNSIVGIKPTVGLISRTGIIPYSYSQDTAGAMARTVSDASILLSVLAGKDDDDPATWKNDDTIDYSTYLDKNGLEGAKIGVYRDVPLEQFRDPDEYDKILFNNTVEELTKAGAIVIEDIEMPAFDRKWNWNKLNNEFKHGLDNYLRNLPQSMPVHTFSELVEWNEKNSEKALKYGQDLLKNRQHLVNPLKNPNYILESLTDLYYSQNEGIDYAIAKYGLDAIMFPSYVGAEICARAGYPSVAVPAGFKDNGRPFGVTFAGKAFSEPMLIRIAFAYEQRTKHRKKPLLSHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIR4</accession>
    <name>E3EIR4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Beta-xylosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yxiA3</name>
        <name evidence="6" type="ORF">PPSC2_09260</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 43 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370550.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21730"/>
    <dbReference type="CAZy" id="GH43">
        <property type="family name" value="Glycoside Hydrolase Family 43"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55933">
        <property type="protein sequence ID" value="ADO55933"/>
        <property type="gene ID" value="PPSC2_09260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1951"/>
    <dbReference type="eggNOG" id="COG3507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009397_1_2_9"/>
    <dbReference type="OMA" id="WPYLHVR"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032291">
        <property type="entry name" value="Abn2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006710">
        <property type="entry name" value="Glyco_hydro_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16369">
        <property type="entry name" value="GH43_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04616">
        <property type="entry name" value="Glyco_hydro_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GH43_C" evidence="5">
        <location>
            <begin position="349"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="225"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity, responsible for pKa modulation of the active site Glu and correct orientation of both the proton donor and substrate" evidence="3">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="461" mass="51740" checksum="2480B20BB0579925" modified="2011-01-11" version="1">MVMLLMLGLSGCGDNTPDPVYPQAPPPDHLYDQSTVDDEQRWTINNAHDPAIIKTDQGYYVYSTDVKTGGELRPGVMVRKSTDLIHWNWVQYALPGIPKEAGAWSTATNLWAPDVIKMGDTYRMYYSASTFGSTRSAIGLQTSHSPEGPWKDEGLVVKTDEHDKLNAIDANPVLDADGNPWMVYGSFFGGIYITPLDPQTGKLKESGYGKNIAARDRATEDGAVEGPYIVYNPVFRKYYLFVSYDSLFEDYNVRVARSDSITGPYVDMNGHDMADTSYLPQYEIGTKVLGGYRFSEGEGWVAPGHNSVLKDGDDYYIVHHARGETDKSWPYLHVRKILWTADGWPVVSPERYAGEKEQDIPKRLLSGNWERIVIRQEVDGQVEAEPLRLEDGGRATSGSLEGHWSFDGRRTLTMNWSNASEGSKEEVLLLPSWDWELGRHTLIFTGMNEKGISIWGKRISD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIV9</accession>
    <name>E3EIV9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xylanase deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hmsF</name>
        <name evidence="2" type="ORF">PPSC2_09465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370595.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2006"/>
    <dbReference type="EnsemblBacteria" id="ADO55978">
        <property type="protein sequence ID" value="ADO55978"/>
        <property type="gene ID" value="PPSC2_09465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1996"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030024_2_1_9"/>
    <dbReference type="OMA" id="MSFQSHT"/>
    <dbReference type="OrthoDB" id="635734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0858">Xylan degradation</keyword>
    <feature type="domain" description="NodB homology" evidence="1">
        <location>
            <begin position="125"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="332" mass="37959" checksum="0D45C0F57D5A81BF" modified="2011-01-11" version="1">MKHTFLKRTLLIISLVAILGILVYEARSIYHTPVVKGTHRTRTANADRLVRHLFSLTPTPDRVYYQNKVIVLMYHEVTKTPPDPGALKLSNLTKQLDEMKANGFHWITMKEYTDFILHKGKVPDNAVLMTFDDGYESFYTDTFPVLKKYHVPATNFLITSTISNPKHIGIPKLTWNQIHQMHAEGIDFYSHTNDEHSYGYSNTTRTKQKPLLMGPVYSKKLGRMETEEEFKQRIYTDLDMADKKLFKHLHNDQNVLAFPYGGYTKETLEICRSLGIDVTFTVKRGINSPGQTNGYRVNAGGIHNIPEVLVQYMKEGAPLRPLPFAQGPNEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ04</accession>
    <name>E3EJ04_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidase M56</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370791.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2213"/>
    <dbReference type="EnsemblBacteria" id="ADO56185">
        <property type="protein sequence ID" value="ADO56185"/>
        <property type="gene ID" value="PPSC2_10435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2199"/>
    <dbReference type="eggNOG" id="COG4219">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_672402_0_0_9"/>
    <dbReference type="OMA" id="NIEMNIY"/>
    <dbReference type="OrthoDB" id="973469at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="406" mass="46783" checksum="2C35AB3DB6F563D8" modified="2011-01-11" version="1">MIFKNKRRLYKLFAVVFLLLLFLSAILLINLTHTEEIADPDMIARTVLKAGDTSSFKIDRLNSSFQWFHSLDRAIQFKKFDFKVPDHLPEGYQLEIVDLSTLFSDANQADLLNVVSIMFVSKFGSKNEQFIEMLASKGKGNMLEHNLLWGAPNSQKLAQTQFFQQSEVTLGNVKGVLFTKKQGSQHNRKAANSFVWQDNGVSYAINWEKLTQKEIEKVVQSFTFPQQVQRVRYDGEGNSFPLYDETDLLAVKDILGFKVKFPDSLLNTHLTLNDSILLRAEDQNTSYSFRQTADALWNTYRAPYNSTIYDDPNDEILFYQSKVPLFETTKLSFIRKLEISGVEISAYADNNHIYFGPLYSSNDKSKLKSQTYYFWKQNNVYYATAFLGLDKNQEDSLRPLVLTPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ07</accession>
    <name>E3EJ07_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_10450</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370794.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2216"/>
    <dbReference type="EnsemblBacteria" id="ADO56188">
        <property type="protein sequence ID" value="ADO56188"/>
        <property type="gene ID" value="PPSC2_10450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2202"/>
    <dbReference type="eggNOG" id="COG3896">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_101381_2_0_9"/>
    <dbReference type="OMA" id="HGLYDIE"/>
    <dbReference type="OrthoDB" id="1869017at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012853">
        <property type="entry name" value="CPT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007531">
        <property type="entry name" value="CPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="1">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="11"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR007531-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR007531-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="22755" checksum="8D083E95E8AFAD19" modified="2011-01-11" version="1">MKQGILVFLNGTSSSGKTSISTELINQKEILFYHLSIDDFFNNYYDFINNKFPDDPPKEIDHQVVSQILDDSIFSVYHSTIKLLLELGFNVIADTIIDNDKRFNEFIDQFFDQPTLFIGVICSEEELIKREQTRGDRQIGLAASQFSKVYCIDEYDLEVNTEEMNPIECAEKILSFIKSNKDYSVFKKLSKRNVSVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ48</accession>
    <name>E3EJ48_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370835.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23015"/>
    <dbReference type="EnsemblBacteria" id="ADO56229">
        <property type="protein sequence ID" value="ADO56229"/>
        <property type="gene ID" value="PPSC2_10620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2244"/>
    <dbReference type="eggNOG" id="ENOG5033KM7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_186865_1_0_9"/>
    <dbReference type="OMA" id="FEIEQTV"/>
    <dbReference type="OrthoDB" id="1874461at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="27"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10738" checksum="27345F2FCA7CE588" modified="2011-01-11" version="1">MTPFEDNLHGENEQKSQTGKGTTESKHQEQPINRDHAEQYPTEQESLFDRFEIEQTVDAIPVEDLKMERQEERDKDATKHTSSSEKKYKDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ50</accession>
    <name>E3EJ50_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyridine nucleotide-disulfide oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370837.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23025"/>
    <dbReference type="EnsemblBacteria" id="ADO56231">
        <property type="protein sequence ID" value="ADO56231"/>
        <property type="gene ID" value="PPSC2_10630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2246"/>
    <dbReference type="eggNOG" id="COG0492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031864_5_0_9"/>
    <dbReference type="OMA" id="AAIWIHK"/>
    <dbReference type="OrthoDB" id="2049098at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="1">
        <location>
            <begin position="3"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="33209" checksum="0BE556F829E8CD32" modified="2011-01-11" version="1">MKYDCIIVGGGIAGLQAAIQLGRYSSHRVLVIDSGYGRSTLCHQYHNILGFPDGISGEELRGLGRSEAMKLGTEFVDGKAVKATKRDELFDIEVEAGAVYTSKTLLLATGLTDRFPKLEGLQACLGNSVYVCPDCDGYEVQDRRTVVMGAGKAGASMALILSARTDHLVYVNHERSEVPNELIVKLREKGIEYKEAAISEIITGQPGCFEGVRLADGQVVQAERGFLAFGSNHVHSELAEQLGVHLLHNKHIETHPRSKMTNVENVWVAGDLGAHAEQATVAMGEGAMSAIWIHKVLSGMKTKVPQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJA9</accession>
    <name>E3EJA9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yhcR</name>
        <name evidence="3" type="ORF">PPSC2_11405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371001.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23775"/>
    <dbReference type="EnsemblBacteria" id="ADO56396">
        <property type="protein sequence ID" value="ADO56396"/>
        <property type="gene ID" value="PPSC2_11405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2412"/>
    <dbReference type="eggNOG" id="COG2374">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2755">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4085">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_298062_0_0_9"/>
    <dbReference type="OMA" id="IFFIGDH"/>
    <dbReference type="OrthoDB" id="233735at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039975">
        <property type="entry name" value="IFT52"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008964">
        <property type="entry name" value="Invasin/intimin_cell_adhesion"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12969">
        <property type="entry name" value="PTHR12969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49373">
        <property type="entry name" value="SSF49373"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169285" evidence="2">
        <location>
            <begin position="38"/>
            <end position="1011"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="963"/>
            <end position="982"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1011" mass="108657" checksum="D0E228CE31324706" modified="2011-01-11" version="1">MGIFRRFTSRSFKYATAMVFTLSLYAGVVGGIQPARAEGPADPAPFIAAKVVNENAGKKVLFDNTHGQTAGAADWVIDGGFSDFGQALANNGYDVHELRQSTPITYNDLKNYDVFVTAEPNIPFKQSEQAAMEQYVKAGNSIFFIGDHYNADRNKNRWDGSESINGYRRGAWEDPAKGMSEEEKSSTAMQGVVNSDWLGSQFGIRFRYNALGDITANQIVEPAQAFGITAGVSNVAMHAGSTLAIIDPTKAKGIVYLPKTNQAWGNAVDQGVYNGGGIAEGPYAAVAKVGLGKAAFIGDSSPVEDATPKYLREETGTKKTTYDGFKEQDDAVLLVNMVDWLSKKEEYTSLSDVKNLHLDQPTALLSFEDPQASTEPQAEPWSAPAAGYKWWDQRTFKAGSYGGSTASAQPVYSIVRQEQLPNAQPFQIRIVADQLAPNSTISGFSAGIYVAGGNQVAQIQNPDGSWPTSYGYSGTFSLESDSKGHAYRDLTVRIKPGTSGSANLRLRQNGSNLLTQSVVLADVPAQPLPEDGNTIPARISVAEARTLSAGKVVTLEGVVTTEPGAFGGQAFYMQDESGGIYVYQNQSGFHPGDRVKITASLALYNSEVELTDPVAIEKTGEGQLPQAVQVTELNDANQGQLVELPTAIIRNVIDATPVGSFEFDAVAGEVSHHVRIDARTGLTRTSFPYQEGQQVKLKGISAVFKGNYQLKPRGLDDFSAQTDATLQEVELSLDQTTFNVGDTTVTHLKGMLTDGSQADLSNASVQYSSSHESVALDTYGELRALKEGSAEITASVTLDGKTVVSNPVTVRVEKTAAGEVPGKPVLSHDNGQDTGLKDGDYNITMNLWWGTNGDELKWYENDKLIETQSLHAASPGAQHAVISVTGKSNGTYTYTAELINASGKTVSDPLTVEVTDASPGIPVLSHNNWDGNGDYTLTMNMWWGTNATQYNLYENGKLIDTQDLSSQSPQAQSAATNIQNQKPGTYEYRAELVNAAGEVSSQTISVEVKER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJN4</accession>
    <name>E3EJN4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385819.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59405">
        <property type="protein sequence ID" value="ADO59405"/>
        <property type="gene ID" value="PPSC2_28030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5941"/>
    <dbReference type="HOGENOM" id="CLU_1480660_0_0_9"/>
    <dbReference type="OrthoDB" id="1967892at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013443">
        <property type="entry name" value="CRISPR-assoc_prot_put_VVA1548"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09652">
        <property type="entry name" value="Cas_VVA1548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="19648" checksum="16EAB47E512E49E5" modified="2011-01-11" version="1">MITTIKELIANHDIIASGFPAIADLSNYGTKGTPVHLTSLAPTILLEQGISEYYALELPRNTVFNNAEEIIAADLPVRKYCVSKVDNAAELDAVIVSRHQGTVNILKEQYPDAPVLENIMPADIKGKHVVGTLPPHLISSAGAYTPVTIKGFNYAVDGDLSGQELLDRMVISNQAIKLVEVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJQ4</accession>
    <name>E3EJQ4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF262 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59652.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886185.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59652">
        <property type="protein sequence ID" value="ADO59652"/>
        <property type="gene ID" value="PPSC2_26880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5682"/>
    <dbReference type="HOGENOM" id="CLU_1465244_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004919">
        <property type="entry name" value="DUF262"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03235">
        <property type="entry name" value="DUF262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF262" evidence="1">
        <location>
            <begin position="39"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59652.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="20503" checksum="E5177CD459ABE76D" modified="2015-05-27" version="2">MNFSDIPQFTRFGTWECNFSLVSFVRFIEEAERDEGLEMNPDFQRGHVWTEEQQVRYIEFLLRGGKTARTIYLNHSHWNKRSDTSSESFYVCVDGLQRATAIRRFVNNEIRVFGLLFKEFEGSPRIVQGVFIHVNDLPTRKEVLQWYIEFNSGGTVHSEEEINRVKELLEKEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK35</accession>
    <name>E3EK35_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0353"/>
    <dbReference type="EnsemblBacteria" id="ADO59744">
        <property type="protein sequence ID" value="ADO59744"/>
        <property type="gene ID" value="PPSC2_26460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5578"/>
    <dbReference type="eggNOG" id="ENOG50348XU">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_095232_0_0_9"/>
    <dbReference type="OrthoDB" id="1336204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="247" mass="28682" checksum="0FB1DFB2EE3DAA19" modified="2011-01-11" version="1">MSLDFVRLHADQKEVLLKDLNSLIQAAHQMVNSVQQNTLDLDEAHQITALMEFNHIDIAKMVGYESYVTKKREEHYPENREVNKRNHELEQKASLKPLDGLKEQLNQLSGVVSEWWKTDGFHCVNDFRFYSSGCAGMTFCFMLKYRYSTRKLPMAERFNKKVYVDKIKNDGYEIEDIEGYGLEVLDTPNNRSLLRSLLISRFPSIRINSFRNQVVGKNDDTYILTGIDATIFDLTDIPQYKQGTNPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK44</accession>
    <name>E3EK44_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386167.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0362"/>
    <dbReference type="EnsemblBacteria" id="ADO59753">
        <property type="protein sequence ID" value="ADO59753"/>
        <property type="gene ID" value="PPSC2_26415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5567"/>
    <dbReference type="HOGENOM" id="CLU_2059069_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="119" mass="13909" checksum="2A5426820249305C" modified="2011-01-11" version="1">MLERAKVEFVQATLNEEGLELGKVYEVQAHPLDRSKWYIVSSGNVWTLYDKWQFVHIIEQYAIYEAHFGLFQLPILETEKYVLTVIAPTGYVMQVPIADCKIKDYAYTQRINCGDLRFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK54</accession>
    <name>E3EK54_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386177.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0373"/>
    <dbReference type="EnsemblBacteria" id="ADO59763">
        <property type="protein sequence ID" value="ADO59763"/>
        <property type="gene ID" value="PPSC2_26350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5554"/>
    <dbReference type="HOGENOM" id="CLU_2754143_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="70" mass="8366" checksum="D619BCD7B3711C41" modified="2011-01-11" version="1">MKAMSGKWEIDILDNNIVEYRDSKKWRTTYYEFRAIPAGILFNKDSRYYLDKIDVPETALRKAKSMIKKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKB3</accession>
    <name>E3EKB3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385854.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0046"/>
    <dbReference type="EnsemblBacteria" id="ADO59440">
        <property type="protein sequence ID" value="ADO59440"/>
        <property type="gene ID" value="PPSC2_27860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5904"/>
    <dbReference type="HOGENOM" id="CLU_1757036_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="17439" checksum="0D9443851B60F2D0" modified="2011-01-11" version="1">MKVHDLVLSISFADVLKELIITNANYKNRLNEFLIYFQKLNKEINVKDETRNSYSGILTIDRYSYARCYVSTERNKVYIPVKEYLHANVGDWEIENVSPSLLVAALLVTLTEEGDCFTERERLEFARKLYWHSYALNIKTTMLKNKLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKB8</accession>
    <name>E3EKB8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385859.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0051"/>
    <dbReference type="EnsemblBacteria" id="ADO59445">
        <property type="protein sequence ID" value="ADO59445"/>
        <property type="gene ID" value="PPSC2_27835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5899"/>
    <dbReference type="HOGENOM" id="CLU_1178382_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="27312" checksum="B47321C7C94F5690" modified="2011-01-11" version="1">MNRINQRGMDLIQYKCELMKDYPKIVKDSLYLALEQMVENKVLDMDTYMFIREDSTTATSFEEYLYSKPNFLKTEEEIFAEFEIIRSKLNDKLASHGLDMLHSESVVDKEVILVTKKFCVNEEFTMNYFGVEEKDLLKLMKRRGFVEKFAILRLTAIFKPFMETLDFPKDLFIYDMSLVYYDKDENGYSIDLDFELPVEEVEREEKLDEICEGMSVVVEKTQAHFDAKTIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKK2</accession>
    <name>E3EKK2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386248.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59834">
        <property type="protein sequence ID" value="ADO59834"/>
        <property type="gene ID" value="PPSC2_26005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5469"/>
    <dbReference type="HOGENOM" id="CLU_1193935_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="27301" checksum="E487DFBD77F4522F" modified="2011-01-11" version="1">MGHNKEEQLRLQMISDEFEVLASQYFQKNNISTNETLYVLSSYMFSLTNRVVKEERRKEAHDDAEEKVYIVTSGSHSDYRIHRVFFDEELANTYAKSVYDSQVEEWKIDDTVDLKLFKTVTATYIISPSGWDSFNVDISMHNQLDSDKDQIEQSIYFDDKTSSTNPREFLEITRIVPLDALDDEVERRYELLCKELRTKIQELMSTEGWTDEMVDEWLEKQGSWDHASSLIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL63</accession>
    <name>E3EL63_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386039.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59625">
        <property type="protein sequence ID" value="ADO59625"/>
        <property type="gene ID" value="PPSC2_27015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5713"/>
    <dbReference type="HOGENOM" id="CLU_1446335_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="21214" checksum="58BA8D18E1FBF46E" modified="2011-01-11" version="1">MLKGNAFIKGHMNSTLKLLEGIRQFDMILLSSATLLEDSRFVMNKFLELISKDGKVGIKMVPPVDSLTLKNLLMECGMEVVQHVKVEQQPYIFFKKRSTLSKEGTDIKTWFDYLQKSSSVLCMGEDILLSTKTLFSLNHKDQGNRSFVVISDEDDSSIYEKVKKYSIIYETPLEQIILESTDSNAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL69</accession>
    <name>E3EL69_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386045.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0239"/>
    <dbReference type="EnsemblBacteria" id="ADO59631">
        <property type="protein sequence ID" value="ADO59631"/>
        <property type="gene ID" value="PPSC2_26975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5704"/>
    <dbReference type="eggNOG" id="ENOG5030JZ5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2754144_0_0_9"/>
    <dbReference type="OMA" id="KMWDYGE"/>
    <dbReference type="OrthoDB" id="1985280at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="70" mass="8135" checksum="447C674F3695B55F" modified="2011-01-11" version="1">MKFKYINDTNRVVSIHPATFTHGCIADKEKILPKDMCVFNLPEGTYPWVKMWDYGERGLSILVSPMKDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELA4</accession>
    <name>E3ELA4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59936.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59936">
        <property type="protein sequence ID" value="ADO59936"/>
        <property type="gene ID" value="PPSC2_28500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6046"/>
    <dbReference type="HOGENOM" id="CLU_2393589_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59936.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11902" checksum="D6226FA8F906B848" modified="2015-05-27" version="2">MVGVNDLKKYRVQTDKNSSAPLLTLEQAEGVFERWKDDYMSDTVIADESYVEIIESDDDFEDYLVIKKVIAVIDNDRTELQTPREEGFDWDYWAKWQEVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCB9</accession>
    <name>A0A0D5ZCB9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886020.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44293">
        <property type="protein sequence ID" value="AKA44293"/>
        <property type="gene ID" value="PPSC2_17680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3780"/>
    <dbReference type="HOGENOM" id="CLU_1853239_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019690">
        <property type="entry name" value="DUF2569"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10754">
        <property type="entry name" value="DUF2569"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="15990" checksum="3F77A3A3B65B8D9B" modified="2015-05-27" version="1">MQLSQNSMSGIKGWLLFFVIYSFYLLISNLIDLYFEFYIYMLVGTIGWNLARTISVGIYLFSEVLIIVSLVLILKKKRKGPNIIIQIEIITIIFGFLNFILTINKIDELPSLISTIIFGSIWILYFKNSKRVKATFES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCJ3</accession>
    <name>A0A0D5ZCJ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fhuD9</name>
        <name evidence="4" type="ORF">PPSC2_18180</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05505"/>
    <dbReference type="EnsemblBacteria" id="AKA44296">
        <property type="protein sequence ID" value="AKA44296"/>
        <property type="gene ID" value="PPSC2_18180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3884"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_0_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5002300516" evidence="2">
        <location>
            <begin position="32"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="3">
        <location>
            <begin position="68"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="AKA44296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="35888" checksum="6CB3BAB7B51D1797" modified="2015-05-27" version="1">MNRNVKHSMAFILLLSFTLLLSACSGSSSPAATDGASQGNNNTSAEPTSQERVLKDALGHEVKVPAQPQRVLASYLEDHLVALGVKPVAQWSVGKNSVQAYLQKELKDVPAIASDLPFEAVLNFKPDLIIMDSASMVEGDKYDQYSKIAPTYVVGSNMNNDWRQELLTVGEVLNKSSEAKQALSDYDKKAAEAKAKLSQKVGQKTAAALWVTDKNVYVVNQNLSSGDVLYKDLGFKIPQVVQEISKTAKANWSNLSLEKLAELDADYIFIVNSKKVSKDEIIKDPVWAGIPAVKEGHVYDFGKDSSWLYTGTIANSQMIDDVLKNVMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCJ8</accession>
    <name>A0A0D5ZCJ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44309">
        <property type="protein sequence ID" value="AKA44309"/>
        <property type="gene ID" value="PPSC2_20985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4475"/>
    <dbReference type="HOGENOM" id="CLU_2684407_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8383" checksum="99B8E4C31AA3B8AF" modified="2015-05-27" version="1">MGSIDQSSQSRIDQRYTRPFLGRAIVKTQHEADDNDNKPMKNASKIASHLTQLILIININCVNIILFTSEQNII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCM4</accession>
    <name>A0A0D5ZCM4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886232.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0475"/>
    <dbReference type="EnsemblBacteria" id="AKA44334">
        <property type="protein sequence ID" value="AKA44334"/>
        <property type="gene ID" value="PPSC2_25870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5435"/>
    <dbReference type="HOGENOM" id="CLU_1395145_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="22576" checksum="03140B164C5BCE88" modified="2015-05-27" version="1">MGNWDSYDGLDYCNCGSSMPYGVGFCSDTCYLASLNEEQRVKVLLSRSLQQAQKDQGREAQKIRIMDRVLSHNSNYRLPGDVVRFYFTNNIGRDFLGLYQKGKRFCFGRVAYFTSSQGVSNCEHYENPLAFESFLYAKGYNCEHKILDDQGNEVSYFDFEQLIFSTLWDDEQNVIAHNIPVYNGHMQHYRYAGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4D9</accession>
    <name>E3E4D9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Beta-galactosidase</fullName>
            <ecNumber evidence="3">3.2.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gusB</name>
        <name evidence="9" type="ORF">PPSC2_12705</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.</text>
            <dbReference type="EC" id="3.2.1.23"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 2 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371283.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00365"/>
    <dbReference type="CAZy" id="GH2">
        <property type="family name" value="Glycoside Hydrolase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56679">
        <property type="protein sequence ID" value="ADO56679"/>
        <property type="gene ID" value="PPSC2_12705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2701"/>
    <dbReference type="eggNOG" id="COG3250">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006501_6_3_9"/>
    <dbReference type="OMA" id="WGILNEC"/>
    <dbReference type="OrthoDB" id="1832114at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004565">
        <property type="term" value="F:beta-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016052">
        <property type="term" value="P:carbohydrate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036156">
        <property type="entry name" value="Beta-gal/glucu_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006101">
        <property type="entry name" value="Glyco_hydro_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006103">
        <property type="entry name" value="Glyco_hydro_2_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006102">
        <property type="entry name" value="Glyco_hydro_2_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006104">
        <property type="entry name" value="Glyco_hydro_2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00703">
        <property type="entry name" value="Glyco_hydro_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02836">
        <property type="entry name" value="Glyco_hydro_2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02837">
        <property type="entry name" value="Glyco_hydro_2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00132">
        <property type="entry name" value="GLHYDRLASE2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49303">
        <property type="entry name" value="SSF49303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_2_N" evidence="8">
        <location>
            <begin position="15"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_2" evidence="6">
        <location>
            <begin position="163"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_2_C" evidence="7">
        <location>
            <begin position="262"/>
            <end position="565"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="578" mass="67189" checksum="A7AD90610CF6F25D" modified="2011-01-11" version="1">MIRTFQQHRLRESQQLDGLWDFVFDKNNVGLSEEWNTNFPSNYDRVPVPGCWNNELGKYEYEGVAWYRTWVTLDNPSHLRLLFHAVMGHADVYWNGQHLGYHYGGFTPFDFTIQDVTSGVHELIVRTDSTLGTNTLPYHIVDWFHYGGIIRPVEVQLLPDVWIEGMRITYEMTGDSSADVRILLKLCSMSDKPVEVPVSLYRNNEMFQSDSAYLSAKGSTELVLEQAWSDLQRWDTDDPALYMIRAVVGQDDRTDRIGFRTVETRDKKILLNGKELYLQGVNRHEEHPEWGFAFPNKLMTKELGIIRQMGCNTIRGSHYPQSEYWIDLLDEQGILFWSEIPIWGAAFPAEETDDPLFVERALTMMDEMIERDFHHPSILFWSVHNEIDTRSQQAYDLSVKMTELVRSKDQSRLVAFATMHPMTDICLGLFDVIGINYYGGWYFGHVEFEEMLEAFHERCNEYGAEYTPVLMTEFGGAGVYGDSGWEPRLFSEDYQADLLGKSLKLFRSDPKISGTYVWQFADTRGQLLSHQPHFRDRARSFNNKGLVNEYRKPKLAYRVVKGIYTDHSDPYDWGSTLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4P1</accession>
    <name>E3E4P1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YnbB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ynbB</name>
        <name evidence="1" type="ORF">PPSC2_13930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371540.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01585"/>
    <dbReference type="EnsemblBacteria" id="ADO56940">
        <property type="protein sequence ID" value="ADO56940"/>
        <property type="gene ID" value="PPSC2_13930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2976"/>
    <dbReference type="eggNOG" id="COG4100">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037803_3_0_9"/>
    <dbReference type="OMA" id="YGHDDLG"/>
    <dbReference type="OrthoDB" id="637281at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009651">
        <property type="entry name" value="Met_g_lyase_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46658">
        <property type="entry name" value="PTHR46658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06838">
        <property type="entry name" value="Met_gamma_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="45600" checksum="2346C3B5D22F3B35" modified="2011-01-11" version="1">MVVFSPEIQQIQETVEHKIQERIQHIDHIVDANQWKVIQAFQRKQVSDFHFAGSTGYAYNDRGREVLEEVYADVFGAEAALVRPHFASGTHTIATALFGVLRPGDELLYITGRPYDTLHKVIGKPGDGTGSLQDFGVTYGETALTAEGKVDWKAVESAIHDNTKVIGIQRSRGYDWRASFSVADIEEMTARVKKIKPDVIVFVDNCYGEFTEKLEPTQVGVDLMAGSLIKNPGGGIAETGGYICGKHQYVELASYRLTAPGIGGEVGAMLGTTRGIYQGLFLAPTLVGQAVKGSIFAAAVFEEMGFETKPAWHEERTDLIQAISFSGAEHLIAFVQGIQRAAAVDSHVVPEPWDMPGYEHPVIMAAGTFIQGGSLELSADAPIREPYIGYMQGGLTYSHVKYGVLMALQTMKERKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X8</accession>
    <name>E3E4X8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkaline-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqhY1</name>
        <name evidence="2" type="ORF">PPSC2_15100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the asp23 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013310820.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02720"/>
    <dbReference type="EnsemblBacteria" id="ADO57186">
        <property type="protein sequence ID" value="ADO57186"/>
        <property type="gene ID" value="PPSC2_15100"/>
    </dbReference>
    <dbReference type="GeneID" id="66576964"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3223"/>
    <dbReference type="eggNOG" id="COG1302">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113198_4_2_9"/>
    <dbReference type="OMA" id="AYVFLQY"/>
    <dbReference type="OrthoDB" id="2035639at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005531">
        <property type="entry name" value="Asp23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34297">
        <property type="entry name" value="PTHR34297"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03780">
        <property type="entry name" value="Asp23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="14577" checksum="1BCB08612039DDE5" modified="2011-01-11" version="1">MSTVPTEFERTEIGEIQIAPEVIEVIAGLATVEVPGVAGMSGGFAGGFAELLGRKNLSKGVKVEVGQREAAVDVSVIIEYGNRLPEVAAAIQHNVKRSIENMTGLNVVEVNVQIHDVQFKNAEKVEEPEVLGAGRVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E509</accession>
    <name>E3E509_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fnr3</name>
        <name evidence="5" type="ORF">PPSC2_15250</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57217.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599995.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3258"/>
    <dbReference type="EnsemblBacteria" id="ADO57217">
        <property type="protein sequence ID" value="ADO57217"/>
        <property type="gene ID" value="PPSC2_15250"/>
    </dbReference>
    <dbReference type="GeneID" id="66576934"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3256"/>
    <dbReference type="eggNOG" id="COG0664">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075053_3_2_9"/>
    <dbReference type="OrthoDB" id="1596937at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00034">
        <property type="entry name" value="HTHCRP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0010">Activator</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="3">
        <location>
            <begin position="29"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="4">
        <location>
            <begin position="147"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57217.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="238" mass="27304" checksum="E7AF221E1F425DFE" modified="2015-05-27" version="2">MRNPTNVMEARGNTCCFSEASFNRLQVMMKDRVMPESSHLFWEGDTADKLFYIKRGRVKVTKTTDEGKELILYMYQSGDLVGQADPFFGTKHSFSAEVLEDSDIGVIDHTDLELLICQHCDFAIDFMKWMGSHHRITQTKFRDLMMYGKPGALCSTLIRLCNTYGEPHGDYILIHKKITHTDLSNMIGATRESVNRMLSDLRKKNAVEYDNGMIVVKDLEMLQGVCHCELCPREICRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E556</accession>
    <name>E3E556_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xkdS1</name>
        <name evidence="1" type="ORF">PPSC2_16190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372002.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3459"/>
    <dbReference type="EnsemblBacteria" id="ADO57416">
        <property type="protein sequence ID" value="ADO57416"/>
        <property type="gene ID" value="PPSC2_16190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3457"/>
    <dbReference type="eggNOG" id="ENOG50330XQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_145216_0_0_9"/>
    <dbReference type="OMA" id="RSEWANW"/>
    <dbReference type="OrthoDB" id="1773926at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020288">
        <property type="entry name" value="DUF2634"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10934">
        <property type="entry name" value="DUF2634"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12055" checksum="C881690E0B2BFDEC" modified="2011-01-11" version="1">MATTDDGRPKKTATYAEYLVQTALKILNTERFQYVVYDADIGVERSEWANWEDVEIKRDIEEALTAHAEISQAEVLSMERDGQNMYLKIKLTGLAGEAELKEAIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E586</accession>
    <name>E3E586_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">arpU3</name>
        <name evidence="1" type="ORF">PPSC2_16335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372032.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3490"/>
    <dbReference type="EnsemblBacteria" id="ADO57446">
        <property type="protein sequence ID" value="ADO57446"/>
        <property type="gene ID" value="PPSC2_16335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3487"/>
    <dbReference type="eggNOG" id="ENOG5032W2M">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107917_0_0_9"/>
    <dbReference type="OMA" id="MCISESK"/>
    <dbReference type="OrthoDB" id="1723150at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006524">
        <property type="entry name" value="ArpU-like"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01637">
        <property type="entry name" value="phage_arpU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18920" checksum="53258054F973E092" modified="2011-01-11" version="1">MGKRRKNNLQLTFNILPVDEKATRLAVEEYLETVRQYRQIGFVRREAAITQAYTYREHQSTNAISKQTENIAVYNVDKEAELATKDKLLELAMSRLGSVQREVIQRSYLDDDGIYDAIICHEMNPPMSDRTFRRIKTDAVFILATALNLTKFINGTEEDTDIAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Q3</accession>
    <name>E3E5Q3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">srrA3</name>
        <name evidence="8" type="ORF">PPSC2_18560</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
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        <property type="protein sequence ID" value="ADO57930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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        <property type="protein sequence ID" value="ADO57930"/>
        <property type="gene ID" value="PPSC2_18560"/>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.3977"/>
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        <property type="component" value="Chromosome"/>
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        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="P:phosphorelay signal transduction system"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="CheY-like_superfamily"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
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            <begin position="3"/>
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        </location>
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    <feature type="domain" description="OmpR/PhoB-type" evidence="7">
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            <begin position="135"/>
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        </location>
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    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="135"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="236" mass="26710" checksum="CCC184B3EEECFB39" modified="2011-01-11" version="1">MTKIVVVDDDVFILQLISEYLKKESYEVTSFSSGKTLVEHIRTNRPDCLVLDIMMPGIDGLSLLTQLREFTEMPIIMISARGEENDRIHGLELGCSDFLTKPFNPRELVGRVKAMLRLSKAGASASDDKQAAEGANLCHAGNLCIFADFRKVTVDGRAVNLTSREFDLLLFLANHLERPFGREHLIQQVWSYDFIGDVRVVDDLVKRIRKKLAEYHSTLVINTVWGFGYKATVQEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5S9</accession>
    <name>E3E5S9_PAEPS</name>
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        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
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            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    <dbReference type="eggNOG" id="ENOG5032T7J">
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="DUF3817_TM"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57956.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="12244" checksum="19818483E7D064BC" modified="2015-05-27" version="2">MLRTPLGRVRLMLWIQAIAYLAILFTHQPLQAAGMTQAVMVIGNIYRVSFLLLLVALIYGKTALHWSIRRPLFIMFASFIPFGLMIMDFVWVRKWTGDSAAEQRTAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W8</accession>
    <name>E3E5W8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">UDP-N-acetyl-D-glucosamine dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">wecC</name>
        <name evidence="5" type="ORF">PPSC2_19825</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
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        <property type="protein sequence ID" value="ADO58187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07045"/>
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        <property type="protein sequence ID" value="ADO58187"/>
        <property type="gene ID" value="PPSC2_19825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4225"/>
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023810_3_2_9"/>
    <dbReference type="OMA" id="GHCLPID"/>
    <dbReference type="OrthoDB" id="295459at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016628">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
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        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028359">
        <property type="entry name" value="UDP_ManNAc/GlcNAc_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500136">
        <property type="entry name" value="UDP_ManNAc_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="4">
        <location>
            <begin position="333"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="449" mass="48661" checksum="3CBBBE46E664B466" modified="2011-01-11" version="1">MKEVGILQLMGKITKGTVKVAVIGLGYVGLPMAVEMAQAGYDVYGVDSDPVKVAKLLQGKSYIIDIGDDALEGLIGQQLHPVTDIKVLEHADIVVICVPTPLTDGHQPDTSYIETAIDQAIPHLRRQTLLILESTTYPGTTEELIRPVIEQRRGWTVGKDFYVCFSPERVDPGSVHFNIRNTPKVIGGCTPDCLAAGAGFYGSFLDQIVPVSSTTVAEAAKLFENTFRSVNIGMVNELTAACEKIGINIWEVLDAAATKPFGYMPFYPGPGIGGHCIPVDPLYLSWKSEQHGFPLEFVDLADRMNRRMPLYIAERIESMLAQEGKAINKANIILAGVAYKKDIDDVRESPALVLFEHLTKMGASVSFTDPYVSSFKLNGEEIPSRTANAQLWESADIVVITTDHSVVNYQQLVDHARLVFDTRNATAHCTGGHVVILGHPGDGGGAAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6N5</accession>
    <name>E3E6N5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphoesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ykuE</name>
        <name evidence="3" type="ORF">PPSC2_20305</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372867.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07560"/>
    <dbReference type="EnsemblBacteria" id="ADO58295">
        <property type="protein sequence ID" value="ADO58295"/>
        <property type="gene ID" value="PPSC2_20305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4329"/>
    <dbReference type="eggNOG" id="COG1408">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025443_3_2_9"/>
    <dbReference type="OMA" id="MQFGIEI"/>
    <dbReference type="OrthoDB" id="1690667at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="88"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="34365" checksum="4450F845364AEF44" modified="2011-01-11" version="1">MEKTPQIRRESQDGPHQEAAIPPGSSRRSLSNEPANPSRRRFLKKAALATAGTALLAGGYASLWEPNHLEITRFNLSLPRLPSAFDGIRVVHFSDVHLGFHMDEQDLSELADRIAGLEPDLLCFTGDIVDDYSVSMKAAVPVMASMHATLGKFAILGNHDYRGLPAGVQELYPKTGFTLLRNEHVVVERAGQRVAIVGLEDNIMGKPNPQRAIHGLPDEMCKLLLMHEPDYADVAAQMSFDLQLSGHTHGGQVRLPVIGAPMPPPGGRKYIQGLFHVGTDRMPLYVSRGIGMTHLPIRVLCRPELSVITLKSGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6P2</accession>
    <name>E3E6P2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">oxyR5</name>
        <name evidence="3" type="ORF">PPSC2_20330</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372874.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07585"/>
    <dbReference type="EnsemblBacteria" id="ADO58302">
        <property type="protein sequence ID" value="ADO58302"/>
        <property type="gene ID" value="PPSC2_20330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4335"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="VRVCANT"/>
    <dbReference type="OrthoDB" id="750230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="301" mass="33823" checksum="8FBD6B2CA7D4055C" modified="2011-01-11" version="1">MFEDLNAFAVVVEQSSLNKASKLLNLSQPALSRKIAKLEEELGVHLFDRRGKRLEITSTGRFVYTFALEQRQRQLRFLQKLSQHKNEAQSMLTLGASLTTLQTTLPTLVEAFMSKHPQTELKLLTGKTHEIVAFVRDKKADAGVVGSAIHEAGLRCIPLFDDHLELVVPIGHELTVKAGTASMKDLQGLPMIIFSKGTWYRSLTDDLFQRSGIMPDIRMEIDSFEAIVRLLPTCKASALLPKSYLRSELLRDNGLTALYLPDLKETRRTTSLIYSETADLGPTARRWISETRASFAGYRMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6S7</accession>
    <name>E3E6S7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yflT</name>
        <name evidence="2" type="ORF">PPSC2_21250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373048.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08480"/>
    <dbReference type="EnsemblBacteria" id="ADO58479">
        <property type="protein sequence ID" value="ADO58479"/>
        <property type="gene ID" value="PPSC2_21250"/>
    </dbReference>
    <dbReference type="GeneID" id="66575813"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4516"/>
    <dbReference type="eggNOG" id="ENOG503371K">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_150010_1_0_9"/>
    <dbReference type="OMA" id="HKSYAKV"/>
    <dbReference type="OrthoDB" id="1899994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025889">
        <property type="entry name" value="GSP17M-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11181">
        <property type="entry name" value="YflT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YflT" evidence="1">
        <location>
            <begin position="11"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF11181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12697" checksum="5EF48DC23EA8985F" modified="2011-01-11" version="1">MNQTNHKSYAKVVENGVQAVEAVNELRNTGYRYEDVFVLAHDQDRTDRIADTVAAKEIGIKEEGVFDSLANLFRSRGDELRAKITSLGFTDTEADFYEKELDQGKVLVIAKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E767</accession>
    <name>E3E767_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373458.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10865"/>
    <dbReference type="EnsemblBacteria" id="ADO58922">
        <property type="protein sequence ID" value="ADO58922"/>
        <property type="gene ID" value="PPSC2_23375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4949"/>
    <dbReference type="eggNOG" id="COG3238">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068878_4_0_9"/>
    <dbReference type="OMA" id="VIFGQLT"/>
    <dbReference type="OrthoDB" id="2005506at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006750">
        <property type="entry name" value="YdcZ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34821">
        <property type="entry name" value="PTHR34821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04657">
        <property type="entry name" value="DMT_YdcZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="17693" checksum="A4933F3DF44675E0" modified="2011-01-11" version="1">MLLGLILAVIAGALVSLQTIFNNKVNERTGSWATTTLVLGTGFLASLLGSLIFEGKNTFALHHMQLWYWFSGMIGVGVVFCLVQGMKRLGPTYAISIVLTAQLGTALLWDSLGWLGLEKIPFTFNKLIGVIVIIGGILVFKFGHGRTKEPQENITPIPDSMKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C4</accession>
    <name>E3E7C4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cheR2</name>
        <name evidence="4" type="ORF">PPSC2_24365</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373669.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11860"/>
    <dbReference type="EnsemblBacteria" id="ADO59135">
        <property type="protein sequence ID" value="ADO59135"/>
        <property type="gene ID" value="PPSC2_24365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5159"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_0_9"/>
    <dbReference type="OMA" id="YFVTQFE"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041522">
        <property type="entry name" value="CdaR_GGDEF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17853">
        <property type="entry name" value="GGDEF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="5"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="433"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="543" mass="63161" checksum="441B59AC57ADFCE9" modified="2011-01-11" version="1">MKLHRAIVVDDEIFTRKGLIQLVDWEICGFEIVGEADNGEDALELISRLHPDLIITDIRMPVLDGLELIRSVLERSTQHPAFIIMSGYSDFAYAQQALRYGVHDFILKPVDDEDFSATLRKLSERLHREQQNAQRYQNHLTGGLLETMMMNPVDDAVVTHWEQQLRLGEATYMYYVLVELNDQHPWHSSDDGVMLSLFQFRELIEQALHRLMGSKYPLYVHEHRNRIGLIVPDFFLECFEAKVEVFMKALQQEIEGMESLKDRLGSRVFVYAGSPVNQLRDIQQSYASAKEAVLHKYIHDHSGIVVYLQGEMPPLHYRTIRQDVLDSLTEQIEELQLEELRATVDYLFSSFREEHYAPEAMKMSLHQCVLSIVRVIQNMQGNERSIQSLEPMINWQDMNLSLGELQRLFTAFAEESGKYIGTLRKECQQGGIQHIRAYIEQHADENISLKSIAARFYMNPVYLGQLFRKTYGVYFNEFLLKLRIQEAKRLLRQTDLRIYEIAERVGFGSSDYFVTQFEKLAHVTPSEYRNSLSVGYEPERSGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7E9</accession>
    <name>E3E7E9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">BcrB7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bcrB7</name>
        <name evidence="2" type="ORF">PPSC2_24475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373693.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5223"/>
    <dbReference type="EnsemblBacteria" id="ADO59160">
        <property type="protein sequence ID" value="ADO59160"/>
        <property type="gene ID" value="PPSC2_24475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5185"/>
    <dbReference type="eggNOG" id="COG1277">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1132746_0_0_9"/>
    <dbReference type="OMA" id="AWWRYAD"/>
    <dbReference type="OrthoDB" id="1569084at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="17"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="216"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="28330" checksum="A8B01C1976EF6871" modified="2011-01-11" version="1">MFDLFKAECLKLKRTKILWLSVIILALTIILQLYSYAGSPKYSIDRDGWNDYFMSIVTLINFLTGYMSYYILTCYIYAREYQEKTHIALFTNPVRRSRLYFSKLLVIYMYIAVSLLLAFVLSALLGMLITTRPLTFEIVRHQLGIFTKMILMHAMLIPIITFFAIRWKKFVPAIMGMCTVMCLNFVLVNAPGNTFYPWTVPVLFSPHGTLGRTYTNVSGGLISICFIFVLGLFLALRSYTRIETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7K3</accession>
    <name>E3E7K3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rbsR1</name>
        <name evidence="6" type="ORF">PPSC2_13320</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371411.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01010"/>
    <dbReference type="EnsemblBacteria" id="ADO56808">
        <property type="protein sequence ID" value="ADO56808"/>
        <property type="gene ID" value="PPSC2_13320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2838"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_0_9"/>
    <dbReference type="OMA" id="MVFVDRW"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="342" mass="38003" checksum="D85F7E470612740F" modified="2011-01-11" version="1">MTTIKQVASFAGVSVATVSRVINETGYVHEDTRRKVEAAVKQLNYKPNEVARSLYKKKSRLIGLLLPDITNPYFPLLARGVEDRMQENDFRIIFGNSDEDRQKELDYMDTFVQNNVVGVISSTNDPAADCYAKLKIPVVFLDRTSSDSLSVYADGAHGGRLAAQAMVARGSRQITVMQGPAHIRPAQDRFRGAVEELQHSGIAYHVVETTSFSFKEAESWAKELFSKYPDTDGVIASNDIVATAVMHEAHRLGKKIPEDVQIIGFDDIPLSSLLFPPLSTIRQPAYEMGWEAAGLLIQLIEQAQATKSSVPNLHSKVLTYSSIQLPVKFIERETTRKVDHHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7N5</accession>
    <name>E3E7N5_PAEPS</name>
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        <submittedName>
            <fullName evidence="8">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
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        <name evidence="8" type="primary">phoP3</name>
        <name evidence="8" type="ORF">PPSC2_13480</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56840.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01165"/>
    <dbReference type="EnsemblBacteria" id="ADO56840">
        <property type="protein sequence ID" value="ADO56840"/>
        <property type="gene ID" value="PPSC2_13480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2870"/>
    <dbReference type="eggNOG" id="COG0745">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
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    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="3"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="130"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="130"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56840.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="26550" checksum="F45F79E0F985E130" modified="2015-05-27" version="2">MSKVLIMEDEESIRSFIVINLKRNGFEVLEASEGHEALNILNTVRDIDIALLDVMVPGMDGFEVCRRIRETNERIGIIFLTAKVQEQDKVYALSVGADDHVSKPFSPTELIARIQSLLRRVNVHRETAAKVSFQSGPFTLDLIAKQFKKNGQLIELTPTEFSLIQFFLEKENTPLSRDVLLDHVWGKEYMGDPKIVDVNIRRLRQKIENNPSEPAFLQTVWGHGYKWKGQSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7N8</accession>
    <name>E3E7N8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yfkF</name>
        <name evidence="9" type="ORF">PPSC2_13495</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371446.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01180"/>
    <dbReference type="EnsemblBacteria" id="ADO56843">
        <property type="protein sequence ID" value="ADO56843"/>
        <property type="gene ID" value="PPSC2_13495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2873"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035018_0_0_9"/>
    <dbReference type="OMA" id="IGIGDHM"/>
    <dbReference type="OrthoDB" id="1217595at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="98"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="201"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="240"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="270"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="293"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="325"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="359"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="8"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="385" mass="41608" checksum="DD520B1A3D6F3A57" modified="2011-01-11" version="1">MSSSLRVHYFILIAVIIVAGLCQGLLLPILSISLEQMGVSSSLNGMNAAALYIGSFAMTLVAERTLGWLGFKKLMAGGLVLVLITLLLFPLIPDIRVWFVLRLLVGIGDSALHYSAQLWILLVTPAENRGRNISFYGMSYGLGFALGPLGLWLLDYGMLVPFAALALLCLLVLLLVLIKLPDSRPEKQETEARPAQRFRRSYSWAWYALLPAFLYGYMEASLNSNFPVYGLRIGFHTDEIAALLPFVSLGGLVLQLPLGILSDRWGRKKVLMSVGIAGGLTFMLLPWSGNHFMFTLVLLTIAGGLVGSFFSLGLAYAADLLPKSFLAAANVLASFHFNLGSVIGPNISGGLLDIGTQGSMFLVLGGSYIVFGLLGLFSRKRAPAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7V8</accession>
    <name>E3E7V8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">GTPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ypbR</name>
        <name evidence="7" type="ORF">PPSC2_14180</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371591.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01835"/>
    <dbReference type="EnsemblBacteria" id="ADO56991">
        <property type="protein sequence ID" value="ADO56991"/>
        <property type="gene ID" value="PPSC2_14180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3027"/>
    <dbReference type="eggNOG" id="COG0699">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007634_0_0_9"/>
    <dbReference type="OMA" id="FYVMDYN"/>
    <dbReference type="OrthoDB" id="206024at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045063">
        <property type="entry name" value="Dynamin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027094">
        <property type="entry name" value="Mitofusin_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10465">
        <property type="entry name" value="PTHR10465"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00350">
        <property type="entry name" value="Dynamin_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dynamin_N" evidence="6">
        <location>
            <begin position="49"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="Dynamin_N" evidence="6">
        <location>
            <begin position="641"/>
            <end position="866"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="539"/>
            <end position="598"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="942"/>
            <end position="987"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="575"/>
            <end position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1222" mass="135983" checksum="9771EC843C5CE6BE" modified="2011-01-11" version="1">MMQTITGDADKWLNTIEQIQDNLRKAGDEAGARALGDLMEKAHAQELTIAFCGHFSAGKSSLINSLCGKTVLPSGPVPTSANVVSIRHGRSRVLIHPARSVENPEPEIVEASLSELAEYCKNGGAYESVEVWEDIPILSGRGVLLDTPGVDSTDHGHAMATHSALHWADIVFYVMDYNHVQSENNLSFAKSLSDWGKPLYLIINQIDKHRERELSFTRYRNEVESSFHAWQVHYTDILFTSLKEQNHPWNQWEQLTYLIPNLLERKAELLAYSLVSSMHHLVEQHVETVQAAEEEELNALLKEAGGEEAILRLDIEQKALQQEDEHWRMLPEQEHKRLRQELDHLLEHAHLTPAELREAAGEYLESRKPGFKTGLWFAGGKTEREKERRLDRLAGMLSDQVEGQLLPHVRELLRSWGEGQGLWTAAMEQELDDIRPAMDRQLVEQTVKENALSPEYTLNYCKDLRAAVTADCRRKALALVDRLLAQLAVRAEASREALADARTALLAQAEAASRYSTRLQALASHADLLRSMLPQASAPGGLPRVGTPAPAADTAAAAPTDTASTGAVRPDIAGSRNGSVQSQASTTTARSAAGGRRTRLDAAATRLKAAAALISPYPAMQAAVRDLHARAAALEGGRFTLALFGAFSAGKSSFANALLGEAVLPVSPHPTTAAINRIMAPTSHERHATADVYMKSVDALREDLKYSFRLLGLGEPASVGWQEAVNALSPEGIHPAGRPHYSFLKAAAAGWEEAESLLGQQLQVNLEQYRDFVASERKSCFVEHIDLYYDCTLTRQGIVLVDTPGADSVNARHTGVTFNYMKHADALVFVTYYNHAFTQGDRQFLNQLGRVKETLALNQTFFIVNASDLASSEDELYSVTQHVQEQLQANGIRKPRIYSLSSMLALEAAEQGEASLRAASRFDVFENDFSAFAAEELAGLSIASAMQELGRLRSRIEQHAADARYSAEERELRLEQLTRIRGELENVLLGSTDNNGGSVLSDETDELLYHVRQRLAYRTGEFMAEAFHPSVLREGVGDLRLAFASCGRELMRLIELELSQELLATTLRLEKMGQALVRKAIQQCVDHMNLQLNGLDCTVPGFREWVVPELSDISLQESIQWKDYWNSFKNPKLFFEGMGRANLQTRLEPILRQLIGEAVDQQRERMSSFYIAMMQEEQTWQKAQLREQMLETIRGMEHALKGGEEPQVWEELADQLANLESI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E843</accession>
    <name>E3E843_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex</fullName>
            <ecNumber evidence="4">2.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">bkdB</name>
        <name evidence="8" type="ORF">PPSC2_14960</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371749.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02595"/>
    <dbReference type="EnsemblBacteria" id="ADO57156">
        <property type="protein sequence ID" value="ADO57156"/>
        <property type="gene ID" value="PPSC2_14960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3193"/>
    <dbReference type="eggNOG" id="COG0508">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016733_10_1_9"/>
    <dbReference type="OMA" id="HPCIMAP"/>
    <dbReference type="OrthoDB" id="1626282at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036625">
        <property type="entry name" value="E3-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004167">
        <property type="entry name" value="PSBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02817">
        <property type="entry name" value="E3_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47005">
        <property type="entry name" value="SSF47005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51826">
        <property type="entry name" value="PSBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3 4" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="6">
        <location>
            <begin position="7"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="Peripheral subunit-binding (PSBD)" evidence="7">
        <location>
            <begin position="122"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="87"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="463" mass="50132" checksum="432A9A9BB4827226" modified="2011-01-11" version="1">MSDQTQWNDVTMPQLAESLVSATIAKWLKQPGDPVEQFEPICEVITDKVNAEIPSTLDGIMGDLLAEEGQTVAVGELICRIQTKSAAPTASTGGTPAAPASQSNVQAQSQQSVGSDQSMRGRFSPAVQTLAAEHNVDLSRVPGTGMGGRITRKDVLNFVQQGGSAPTGVTGQTSGTTQGQGSPFTGLQQSAVQHSAPVQNMDPAIPVRNSGIHLTEAPKVPMIEVEGGNNNRSEYFIDVTPIRSAIARNMRQSVSEIPHAWTTIEVDVTNLVMLRNKIKNEFKQKEGINITYLAFLMKAVVNAIKEYPIMNSVWAVDKIIIKRDINISLAVGTEDSVLTPVIKKADQKNIAGLAREIDDLARKTREGTLKLDDMQGGTFTVNNTGSFGSILSYPVINYPQAAILTFESIVKRPVVIDDMIAVRSMANLCLSLDHRILDGVICGRFLQRVKENLEGYTLDTKLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E916</accession>
    <name>E3E916_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaS13</name>
        <name evidence="5" type="ORF">PPSC2_24745</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373756.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12240"/>
    <dbReference type="EnsemblBacteria" id="ADO59223">
        <property type="protein sequence ID" value="ADO59223"/>
        <property type="gene ID" value="PPSC2_24745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5245"/>
    <dbReference type="eggNOG" id="COG1917">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="FDIVEDH"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="187"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="34549" checksum="65E33DCBE8EBF9DA" modified="2011-01-11" version="1">MRRTKNEDHFDIVEDHYFTTTELEKSSAIWPVRLGMDISKTSCHVGPKAVPYFYFIFVLEGQAEFIYKEKKYRVQKSDLFCFPPHLAHEYYTNQEHPLQKVWIAFEGPKSLALLERIGITPSKPFIANAVSEDILELISNLFSIVNDHNRQGSDLARLITLHQIFEELSRNTSGALRNSVCSDYWLQQGKDYIEMHYCDRVTIEQIAEHVGVDRAHFSRKFHSTFLISPAKYLQTLKINEAKRLLEQTTYNLSIIAQSIGYTDMSTFSKAFKKTAGIPPREYRFRHQSRQEIRTANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E941</accession>
    <name>E3E941_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_24855</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the acetate uptake transporter (AceTr) (TC 2.A.96) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373781.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5311"/>
    <dbReference type="EnsemblBacteria" id="ADO59248">
        <property type="protein sequence ID" value="ADO59248"/>
        <property type="gene ID" value="PPSC2_24855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5268"/>
    <dbReference type="eggNOG" id="COG1584">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051062_3_2_9"/>
    <dbReference type="OMA" id="WKKGNTF"/>
    <dbReference type="OrthoDB" id="1399490at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000791">
        <property type="entry name" value="Gpr1/Fun34/SatP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01184">
        <property type="entry name" value="Gpr1_Fun34_YaaH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="112"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="164"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="22298" checksum="CC5565B794357F21" modified="2011-01-11" version="1">MQNESHSNVKIITADPSAIGLFGLAIVTLVASSQKLGLTEGLSFIIPWAIFLGAFAQLFACIQDAKHNNTFGMTAFGAYAFFWLAVASSWMIKMGVFGSELASAVDGRQLGVAFAGYLIFTLFMTIGAMETHKVLFFIFVLIDFLFLGLSFDAFGIAPEVFHTIAAYAEMGIGLLSLYGTGAAVLNAHFGRTFLPVGRPFGIFKPRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J8</accession>
    <name>E3E9J8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SpoVAD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">spoVAD</name>
        <name evidence="1" type="ORF">PPSC2_17175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372210.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04510"/>
    <dbReference type="EnsemblBacteria" id="ADO57629">
        <property type="protein sequence ID" value="ADO57629"/>
        <property type="gene ID" value="PPSC2_17175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3668"/>
    <dbReference type="eggNOG" id="COG0183">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048574_0_0_9"/>
    <dbReference type="OMA" id="SHNCTVE"/>
    <dbReference type="OrthoDB" id="646737at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010894">
        <property type="entry name" value="SpoVAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038369">
        <property type="entry name" value="SpoVAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07451">
        <property type="entry name" value="SpoVAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF011570">
        <property type="entry name" value="SpoVAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02845">
        <property type="entry name" value="spore_V_AD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="36351" checksum="2E0FC70900C5242F" modified="2011-01-11" version="1">MRRQGGQTWKFESRPRIIGSATVVGPDEGEGPLSTDFDYIYDNIEINEKTWEKAERRLIEHSTELALINSNLNKEEVQFFISGDLMNQIVSSSFSASKLAIPYLGVFGACSTSMESLALAALIVDSEAGDYVMAGTTSHNCTVEKQFRYPNEYGAQKPPTAQYTVTGSGAAIVGHAKSGTVVDCATIGRVMDMGIKDPFNMGGAMAPAAADTLLSHFRDTGRDPGYYDLIVTGDLASVGLPIAKELLKKDGFDMNQTEFNDCGLLIYDINKQKKVIAGGSGCGCSAVVTYGHLLKRIEKGELQKVLVVATGALLSPLTTQQGESIPCVAHAVAFEAGGKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9X0</accession>
    <name>E3E9X0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spoIIB</name>
        <name evidence="4" type="ORF">PPSC2_19420</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372676.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06620"/>
    <dbReference type="EnsemblBacteria" id="ADO58103">
        <property type="protein sequence ID" value="ADO58103"/>
        <property type="gene ID" value="PPSC2_19420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4143"/>
    <dbReference type="eggNOG" id="ENOG5033KWF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050040_0_0_9"/>
    <dbReference type="OMA" id="KEHIWEI"/>
    <dbReference type="OrthoDB" id="1178401at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042834">
        <property type="term" value="F:peptidoglycan binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1070">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007730">
        <property type="entry name" value="SPOR-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036680">
        <property type="entry name" value="SPOR-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05036">
        <property type="entry name" value="SPOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110997">
        <property type="entry name" value="SSF110997"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="153"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="SPOR" evidence="3">
        <location>
            <begin position="225"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="425" mass="47365" checksum="98B40FDDBAC10659" modified="2011-01-11" version="1">MNKAKMTFRFDQQLPETSREDKLQVLPNKNESFTNGQRDMIRDTELHHDDELYQTDNQRKGMERTSSMEKHTRTTQHSELGKPVETNKRIATRRFTPTLRVQEGWDDPFGRSAASWSDADVLPESPEEDDVEVEEAYYSGQEYRKRPPHPSRWRLIGSVASALVTGGMFGYIMLLLFNGGSMVPGSDSLDNEAVPVFKESVDVDTTSAKENAAPVAVVATQVSPQTYYLLQYGVFSTPERALQAKEELLKAGIAAGGDSEDQNRVYAGISSDREQAKLLSNQLKTQGVELYVRELELPGFEKAAYGGNGDKLTTFFQLSNSLVGKLSGLSSTLLREEGPSTVPASDMSELNDLHQQWTQNIAALPTGLPKEAAATATSLEKAMNSAVSALGEYNKNTAKEHIWEIQSSMMEYVLREKEFIQFIKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9X3</accession>
    <name>E3E9X3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Valine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Valyl-tRNA synthetase</fullName>
            <shortName evidence="9">ValRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 14" type="primary">valS</name>
        <name evidence="14" type="ORF">PPSC2_19435</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val)</text>
            <dbReference type="Rhea" id="RHEA:10704"/>
            <dbReference type="Rhea" id="RHEA-COMP:9672"/>
            <dbReference type="Rhea" id="RHEA-COMP:9708"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78537"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.9"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="9">The C-terminal coiled-coil domain is crucial for aminoacylation activity.</text>
    </comment>
    <comment type="domain">
        <text evidence="9">ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.9" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372679.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06635"/>
    <dbReference type="EnsemblBacteria" id="ADO58106">
        <property type="protein sequence ID" value="ADO58106"/>
        <property type="gene ID" value="PPSC2_19435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4146"/>
    <dbReference type="eggNOG" id="COG0525">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001493_0_2_9"/>
    <dbReference type="OMA" id="FATKLWN"/>
    <dbReference type="OrthoDB" id="32262at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004832">
        <property type="term" value="F:valine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006438">
        <property type="term" value="P:valyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07962">
        <property type="entry name" value="Anticodon_Ia_Val"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.740.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02004">
        <property type="entry name" value="Val_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033705">
        <property type="entry name" value="Anticodon_Ia_Val"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010978">
        <property type="entry name" value="tRNA-bd_arm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037118">
        <property type="entry name" value="Val-tRNA_synth_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019499">
        <property type="entry name" value="Val-tRNA_synth_tRNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002303">
        <property type="entry name" value="Valyl-tRNA_ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11946">
        <property type="entry name" value="PTHR11946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10458">
        <property type="entry name" value="Val_tRNA-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00986">
        <property type="entry name" value="TRNASYNTHVAL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46589">
        <property type="entry name" value="SSF46589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="SSF50677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00422">
        <property type="entry name" value="valS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1" evidence="11">
        <location>
            <begin position="24"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_1" evidence="12">
        <location>
            <begin position="616"/>
            <end position="762"/>
        </location>
    </feature>
    <feature type="domain" description="Val_tRNA-synt_C" evidence="13">
        <location>
            <begin position="822"/>
            <end position="887"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="820"/>
            <end position="847"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="9">
        <location>
            <begin position="53"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="9">
        <location>
            <begin position="533"/>
            <end position="537"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="536"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF10458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO58106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="888" mass="102041" checksum="14F5AA28CAEC56B6" modified="2011-01-11" version="1">MSEQDNKTTLEMPTTYDPKSAEQKWYKTWMEKGYFRAGQHPEAEPFTIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKVEQKLREEGLTRYDLGREKFLEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSKAVREVFVKLYKKGLIYRGKRIINWDPAARTALSDIEVEYKEVNGNLYHLQYPLKDGSGFITVATTRPETMLGDTAVAVHPEDERYKQMIGKTLVLPIIGREIPVIADDYVDKDFGSGAVKITPAHDPNDFEMGQRHQLPQITVMDETGTMNAEAGKYQGLDRSDCRKQIVADLKEQGVLIRIEEHVHQVGHSERSGVVVEPYLSTQWFVEMKPLAAKAIEAQKAGNGVNFVPDRFERTYLHWIENVRDWCISRQLWWGHRIPAWYDEETGEVIVSAEDPTTLPEYAGRKLKQDEDVLDTWFSSALWPFSTLGWPEQTEDLKRYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEIPFKDVLMHGLVRDADGRKMSKSLGNGVDPLDVIEQYGTDAMRYMISTSSTPGQDLRFRWERVEQARNFANKIWNASRFALMNLEGVTAADIDITGDLSTVDRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDLCDWYIEFAKLSLYGDNAEAKKKTQSVLAYVLDRTLRMIHPFMPFISEEIWQHLPHEGETITLAAWPAYDPAFEDKDAVAEMNLLIDVIRAVRNIRAEVNVPMSKKIELLIKPGDQAVLDIINRNGEYVRRFCNTSEFDAGLEFTAPDKAMTSIVSGAELYLPLAGLLDIAQEISRLEKELQHLNSEVERVEKKLSNQGFVAKAPAKVIEEEKAKQADYSDKRAKVIARIEELKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAC1</accession>
    <name>E3EAC1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Quinol oxidase subunit 2</fullName>
            <ecNumber evidence="11">1.10.3.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">cyoA</name>
        <name evidence="16" type="ORF">PPSC2_21525</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>2 a quinol + O2 = 2 a quinone + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:55376"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the cytochrome c oxidase subunit 2 family.</text>
    </comment>
    <dbReference type="EC" id="1.10.3.-" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373106.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08720"/>
    <dbReference type="EnsemblBacteria" id="ADO58539">
        <property type="protein sequence ID" value="ADO58539"/>
        <property type="gene ID" value="PPSC2_21525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4576"/>
    <dbReference type="eggNOG" id="COG1622">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036876_6_1_9"/>
    <dbReference type="OMA" id="TSLDWKW"/>
    <dbReference type="OrthoDB" id="1654242at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009486">
        <property type="term" value="F:cytochrome bo3 ubiquinol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016682">
        <property type="term" value="F:oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04212">
        <property type="entry name" value="CuRO_UO_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045187">
        <property type="entry name" value="CcO_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010514">
        <property type="entry name" value="COX_ARM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034227">
        <property type="entry name" value="CuRO_UO_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011759">
        <property type="entry name" value="Cyt_c_oxidase_su2_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036257">
        <property type="entry name" value="Cyt_c_oxidase_su2_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006333">
        <property type="entry name" value="Cyt_o_ubiquinol_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22888">
        <property type="entry name" value="PTHR22888"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00116">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06481">
        <property type="entry name" value="COX_ARM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000292">
        <property type="entry name" value="Ubi_od_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81464">
        <property type="entry name" value="SSF81464"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01433">
        <property type="entry name" value="CyoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50999">
        <property type="entry name" value="COX2_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 11" id="KW-0249">Electron transport</keyword>
    <keyword evidence="10 11 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="49"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="COX2_TM" evidence="15">
        <location>
            <begin position="26"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="COX2_CUA" evidence="14">
        <location>
            <begin position="130"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="288"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="306"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR000292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO58539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="35851" checksum="4DB5D8820E2C1814" modified="2011-01-11" version="1">MNKKPKAIIALVLTVLTVALLIWTCFYAGGKYVVFDPKGPIGQAQKELIILTTALSALIIVPVMILTFFIVWRYRDTPTNKVKYQPHWDDSKKLETTWWAIPIIVICIIAVITARYTYLLEPSKPLASEQKPVTIQVTSLDWKWLFMYPEEGIATVNQVHIPKGVPVRFELTADAPMNSFWIPQLGGQIYTMSGMAMKLHLQADHEGTYFGSGANFSGEHFGQMRFDVEVQSDEEYKNWVADIKKQSKPLTKDGYLALAKPGLSQPDEYSSIPDGLFKEIVNKYVVEGAPNPHAGHGGATSTEDSSKSGTEDHAGMDMSGHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAV1</accession>
    <name>E3EAV1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">abrB9</name>
        <name evidence="2" type="ORF">PPSC2_23820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373551.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11325"/>
    <dbReference type="EnsemblBacteria" id="ADO59015">
        <property type="protein sequence ID" value="ADO59015"/>
        <property type="gene ID" value="PPSC2_23820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5040"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117609_0_0_9"/>
    <dbReference type="OMA" id="TMDINIG"/>
    <dbReference type="OrthoDB" id="1942483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="1">
        <location>
            <begin position="8"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="156" mass="17925" checksum="A8160BF7E631303C" modified="2011-01-11" version="1">MKNTGMTRPLDQLGRIVLPKEMRTTMDINIGDSLEFFVDEEGFVLRKYTGVSCKFCGAVDHLTYFRDSFICADCIQLLKNDEHVHATSNDAIQAQERTKPIQANTTWQPKQSRVQQGEMVKKLRKLIQEHPNLPQKVYAEMLDISQGRVSQLKKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAX1</accession>
    <name>E3EAX1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spermidine/putrescine ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">potD3</name>
        <name evidence="2" type="ORF">PPSC2_23910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373570.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11415"/>
    <dbReference type="EnsemblBacteria" id="ADO59035">
        <property type="protein sequence ID" value="ADO59035"/>
        <property type="gene ID" value="PPSC2_23910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5059"/>
    <dbReference type="eggNOG" id="COG0687">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026974_4_0_9"/>
    <dbReference type="OMA" id="GPPALYM"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019808">
        <property type="term" value="F:polyamine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015846">
        <property type="term" value="P:polyamine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001188">
        <property type="entry name" value="Sperm_putr-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00909">
        <property type="entry name" value="SPERMDNBNDNG"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168712" evidence="1">
        <location>
            <begin position="26"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="357" mass="39345" checksum="39613A33BFFAB9E5" modified="2011-01-11" version="1">MKKWFKGFMAVTLASVVLAGCGSNATSGQTDGKDGSADGKKKLVISTWGFSEDFFNKEVYEPFEKEHNVDIVVEIGNNAERLNKISQGSTDVDLIYLSDYYAQQGIQQGLFEKLDRSKVPNLNQIYDIAKAPLGEEYGPAYTVGRLGIAYNPELVKKDVTSWADLWGTEFKGNVTLPNITATAGPMMVDAASKVAGSKEFNEDQAFGKLKELSPNIVKFYSKTSEFVNMFSQQEIAGGPIMEMYFKDLQAAVPGAKFVAPSEGAYAVMNTINVVKGSDQKELAEEFINWQLSKEVQEKSAKAKVDSPVNTQVVLSGADTQGITYGADVVNKLTKLDMKFVNDHIKAWTDRWNREVTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBA5</accession>
    <name>E3EBA5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fe-S cluster assembly protein SufD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sufD</name>
        <name evidence="3" type="ORF">PPSC2_20970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0051 (ycf24) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58437.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886053.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08200"/>
    <dbReference type="EnsemblBacteria" id="ADO58437">
        <property type="protein sequence ID" value="ADO58437"/>
        <property type="gene ID" value="PPSC2_20970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4472"/>
    <dbReference type="eggNOG" id="COG0719">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026231_3_0_9"/>
    <dbReference type="OrthoDB" id="422804at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000825">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037284">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011542">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045595">
        <property type="entry name" value="SufBD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01458">
        <property type="entry name" value="SUFBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19295">
        <property type="entry name" value="SufBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101960">
        <property type="entry name" value="SSF101960"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01981">
        <property type="entry name" value="sufD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SufBD_N" evidence="2">
        <location>
            <begin position="87"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58437.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="46327" checksum="A45BCFB4FBB14DD8" modified="2015-05-27" version="2">MNVDDLRAWSSAKDEPRWLIERRVHALELAGTLELPKVEKINLEKWDIYESGDYKAENAWSSLEEAPEVVRGLVASPVKGGLIVQFNSDVVYTKLSESLAAQGVILTDLHTAANEHEELVQRYLFQAVKPEEHRLSAAHSALWSGGVFLYVPDGVEVEAPIQAIFINDTSGVCFAPHVLIVAGSNSKITYVDNCVSSRDDVKVLHNSVTEVFAGAGSKVQVASVHQLAATTTDFTQRRAVVLADGGVEWIIGEMNNGYTASDTKTLLQGNGAVSDNKVIAIGTGNQKSSYTTQAQHFGRSSVSQMITRAVMLEEATAIINGITKIEKGATHCDGQQTERVLMLSPKARGDANPILLIDEDDVTAGHAASVGQVNAEQFYYLMSRGISRSEAEHLVIFGFLAPVISEIPLEGVRSRLKDLVESKLGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBL0</accession>
    <name>E3EBL0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yvjA</name>
        <name evidence="9" type="ORF">PPSC2_22940</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58828.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025678240.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10415"/>
    <dbReference type="EnsemblBacteria" id="ADO58828">
        <property type="protein sequence ID" value="ADO58828"/>
        <property type="gene ID" value="PPSC2_22940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4858"/>
    <dbReference type="eggNOG" id="COG1284">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063199_1_1_9"/>
    <dbReference type="OMA" id="AQIIHKY"/>
    <dbReference type="OrthoDB" id="1747063at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019264">
        <property type="entry name" value="DUF2179"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003740">
        <property type="entry name" value="YitT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10035">
        <property type="entry name" value="DUF2179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02588">
        <property type="entry name" value="YitT_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006483">
        <property type="entry name" value="Membrane_protein_YitT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="125"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2179" evidence="8">
        <location>
            <begin position="238"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF10035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58828.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="32166" checksum="8E18F7E301D261A5" modified="2015-05-27" version="2">MSQLNPPAARRRRRKPLIAASGPARNVTDVLLIILGSFITALTFNMFLLPNRIASGGVSGLSILCEDLFGLEPAYTQWGMNIPLFIAGVLLLGKKYGLRSLLGSIMLPLFVYVTKDWAVPTTNPLLASLYGGIGVGLGLGTVFRGRGSTGGLAILAQIIQKYTGFSLSLCVMLMDGTVITLAGFALSPERALYALIGLFVTGKVIDAVEMGLGYSKVAYIISNQKEKITQTILQDLDRGLTELAGRGGYTNEERPVLMVVVGQNEVTRLKTLVRLVDPEAFVIISNTREVLGEGFKREG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC06</accession>
    <name>E3EC06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Peptide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yvrO</name>
        <name evidence="5" type="ORF">PPSC2_24340</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5193"/>
    <dbReference type="EnsemblBacteria" id="ADO59130">
        <property type="protein sequence ID" value="ADO59130"/>
        <property type="gene ID" value="PPSC2_24340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5154"/>
    <dbReference type="eggNOG" id="COG1136">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="QYVFQDQ"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="24689" checksum="CB27234889621B4D" modified="2011-01-11" version="1">MITINNLHKAFKVGERVLEVLKGVDLSIKRGSMTAIMGRSGSGKSTLLNIIAGLDKPDSGTYMYEQEDLTTKTLNQLADFRREKIGFILQNYALIDTKNVFDNVALPLKYSKYPKAKISHMVEDVLEALELEKLGFHSVDMLSGGEMQRVAIARALVQEPEIILADEPTGSLDEHSEQNILGIFKDLNIQGKTIVVVTHDQQVADACDETIYIKEGKIRYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC90</accession>
    <name>E3EC90_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-384</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-384</name>
        <name evidence="1" type="ORF">PPSC2_01235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0247"/>
    <dbReference type="EnsemblBacteria" id="ADO54233">
        <property type="protein sequence ID" value="ADO54233"/>
        <property type="gene ID" value="PPSC2_01235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.240"/>
    <dbReference type="HOGENOM" id="CLU_1538573_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="174" mass="20348" checksum="0968052350E893AF" modified="2011-01-11" version="1">MSLKQELLLDLLQLKVKYTEKEFNEVFSFLQNERVDHSFDEIVRLLNLIDINKKTTNQRTKKKLSNLEKVHNADQDHYLNLINFRDKLLNRSIAAETRELNRFSAEIGIPSSKGRKREQTIKLIIEFLAGLRPEEANHLIEEGLIFANETNSKFELLADAILQRSQTNEINKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECC4</accession>
    <name>E3ECC4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yisR1</name>
        <name evidence="2" type="ORF">PPSC2_01400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368909.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14120"/>
    <dbReference type="EnsemblBacteria" id="ADO54267">
        <property type="protein sequence ID" value="ADO54267"/>
        <property type="gene ID" value="PPSC2_01400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.277"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="CKEHINS"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="190"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="34538" checksum="174247405F1973D1" modified="2011-01-11" version="1">MTYLKVNVDAPIQLISAGEFVSEVPWKHMSRSIENFELILGVQETVYIREEEEYFEVGEGDILLLYPGRTHRGYRESLPGVKFYWFHFDVPATPNVLSSEEMKQETSAMDGLVQRHGVIRDIYLPQSVQADNGDRIHIIVNQILHVANSHYLTYHSANYLFTSLLIEISELALSRLISNPVHSQGNVSMNKIIEWTRIHAGEPLTVTDLAQKFNYNKDYISRLFMQNTGMRPLEFIHSIRINKAKELISRTNMSIKQVAEEAGYTDEKYFMRLFKKRVHMTPSQYRNAYHKTFMNNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECE4</accession>
    <name>E3ECE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YwqB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ywqB</name>
        <name evidence="3" type="ORF">PPSC2_01495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368929.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14190"/>
    <dbReference type="EnsemblBacteria" id="ADO54287">
        <property type="protein sequence ID" value="ADO54287"/>
        <property type="gene ID" value="PPSC2_01495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.296"/>
    <dbReference type="eggNOG" id="COG4715">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038036_1_0_9"/>
    <dbReference type="OMA" id="WDRAKNW"/>
    <dbReference type="OrthoDB" id="1602940at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04434">
        <property type="entry name" value="SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="2">
        <location>
            <begin position="61"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="551" mass="64397" checksum="C1E1317901E6D2DA" modified="2011-01-11" version="1">MKPTYLMDDIQWQQLIQNVADHFNDVTIKRGFQYFKQGKVKEFAMPDADHIAAVVDGNELYEVDLHLSAFAASRCTCPVRINCKHMIAVLLNYANEQERSVHALVNAHSAGFTRLAAKADTRTPTAFRSNLSLEHKETTRDALSKTASNIPDMPVSEWHDLFDQCIALNHVHTQNSQYVQSALASIYAVKPQLSSGMQQLYGLHAHLRVLEKLVPQTPVTGYPTHTYMGYYTQIAADELKEAIERDFESPLELTDEPMHEARMAETLAYLRRRMLTESRNGTYFSDAYYQFWLYWVHPARQDSNIYTEELQHLHAAEEEHSARLARLPWMLAQSWMYVYQAQDHKAWELLQEAERAFPLKISSSQLLLFLHALRQAEDWVRLKNGLRHIGPLLHSHRDDHLQDYMHDWKLVLQHLPEAEEDMWDTLKGMLPFAGGMYEEALLAHEKWRQWIDYQLSIRSEPLSFRVSVLQPIEKNAPELLLPFYHQAVERYVLEKNRSSYKAAVKLLKRLFKLYKKMKQETRWGLFFTTFTSRHSRLRALQEELRKGKLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECF5</accession>
    <name>E3ECF5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YhjG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhjG</name>
        <name evidence="2" type="ORF">PPSC2_01550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368940.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14245"/>
    <dbReference type="EnsemblBacteria" id="ADO54298">
        <property type="protein sequence ID" value="ADO54298"/>
        <property type="gene ID" value="PPSC2_01550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.308"/>
    <dbReference type="eggNOG" id="COG0654">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009665_20_1_9"/>
    <dbReference type="OMA" id="DTAHPYG"/>
    <dbReference type="OrthoDB" id="867226at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="1">
        <location>
            <begin position="3"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="499" mass="55165" checksum="C70474E5B5DCD03D" modified="2011-01-11" version="1">MDYEVIVVGGGPVGMWLAAELALARVSVCVIERLEEPIRQSRALTLHPRTLEMFDMRGLKERFMKRGRPIRTGHFSMLNTRLDFSVLDSSSNYTLFIPQVITEQVIEEHALKLGVVVHRGMEVVSVREQEQGVEVVSVCASGAQANVSVMTAAYVVGADGAGSIVRKQAGIAFPGTDTTLTAVLADVELANPPENGVHSEYSERGGVMIAPVSPDIYRVILTTPRLINVPKDVPVTLEEVRTELRDLLGTDLGVTNPRWLSRFGNATRQAQTYRKGRILLAGDAAHIHFPAGGQGMNVGLQEAANLGWKLAGVIRGWAPDTLLNSYHDERYPVNTQFLRNTEVQTRLLDFTPAVLAHRQLHEEWFRHPEINRSMAEQISALDVCYPAAGNIPQHPLNGKRFADFELQLPDGVTSYAYDLLHEGRFVLLHLAQDPKVSNEFRHISLSHISYVEAIAEELPVGWRGVHTVFIRPDGYIAWAISVEQTDIASVIKAGIVTLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECP8</accession>
    <name>E3ECP8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR1</name>
        <name evidence="6" type="ORF">PPSC2_01750</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368982.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14540"/>
    <dbReference type="EnsemblBacteria" id="ADO54342">
        <property type="protein sequence ID" value="ADO54342"/>
        <property type="gene ID" value="PPSC2_01750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.351"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_2_9"/>
    <dbReference type="OMA" id="EAGLWHR"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="37135" checksum="CBCE93669735B89B" modified="2011-01-11" version="1">MVSIKDIAKQAGVSISTVSYALNGSDKVTEETCARILAIAKELNYVPNAAARNLKKRQTKIIGVFLTDFRGDVYGDLLYGIKEILNRKGYDLIVCSGKQSHRMLPERMIDGAIVLDQTFDSQELLNYAERGHKIVVLDRELNHPNINQVLLDNKAGAALAIEHLLELGHRKLYVVTGPEGSYDSWQRMQAVKQTIERSGVAEMIEIGGNFEKSGGEQAAEIILQQQADPDSKPVAVFCLNDEMAVGFYNRMAQSELTIGKDVHIVGFDNIELAQYIQPRLTTIDYSKRKWGAVAAEQVLKIIAGEDVEHERLYVTLVQRESAGAAFITQDQQNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECQ1</accession>
    <name>E3ECQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">malE</name>
        <name evidence="2" type="ORF">PPSC2_01765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54345.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599401.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14555"/>
    <dbReference type="EnsemblBacteria" id="ADO54345">
        <property type="protein sequence ID" value="ADO54345"/>
        <property type="gene ID" value="PPSC2_01765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.354"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_10_1_9"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168139" evidence="1">
        <location>
            <begin position="22"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54345.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="45797" checksum="E150741BA6455CDD" modified="2015-05-27" version="2">MMKRTLGIILASTLLLGGALAGCSSKDDSSGKDANGKTTITMWGMGAEGKLLPEIVKDFEKENPDIHVDVQALPWDNAHDKLLTAVASKSGPDVVQLGTSWVPELASAGALTDITPYISKYPELEAKNFFEGAVGTAQFEGKPVAVPWYTETRVLFYRSDLLKQVGYNEAPKTWEELSDAAQKLAARGKGKYGISFSAKEQSMGFMFALQNGSKLVDEQGNPLFNQPPFVDAVKYVNTFFQNGSNAVDIGIDSVQGLQGEGIVPMFISGPFMIKEIKSKAPELEGKWNIAELPGKVNNLSVLGGANLSIMKFSKHPEESAKFLAYMSKPETQLKWMDLSSNLPATTKSWEDAKLKSDPMLRTIRKQLDHSAALPQLAAWEEVSQQFIKSFERIYRGHADVQKEMDDFNQQAASIMKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECU6</accession>
    <name>E3ECU6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_02115</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369030.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14880"/>
    <dbReference type="EnsemblBacteria" id="ADO54390">
        <property type="protein sequence ID" value="ADO54390"/>
        <property type="gene ID" value="PPSC2_02115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.399"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_1_9"/>
    <dbReference type="OMA" id="NYINERT"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="292"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="313"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="598" mass="67830" checksum="E34FCE995C7AB1CF" modified="2011-01-11" version="1">MMRRFQSIQYRLFVLFLLSMSSIVLAVSLLFYNRTTVQFHDKISELARKNVSQTAGLFELLLDSYNSLSKSISNNMDLVRLLTTDHSDLPAVNYINERTITNILGAIYYSREDLIGIHVITDTGKVYNYGNYMNVIDTHYEHTEWYREIRRSAGKIAWLGVYPHSVIDQVETRPVFAFGRQLYDLDEHKPIGIVLFEAEPRSVLSALHNLRLSTNSQVYLLGHENRIVSATSSDPPPDLRNLQEQVPEEDVIVDRNNEKVVIASKLPFADWSVISVTPSEDLNVELAQNQRYLFIVAPILIMVSALIASIVSRSISHPLKRVIGEMKRVETGNFRHTVNIESYEEINQLATSFNHMVRQIAELIELVRISSVSEKNAELHALQTQVNPHFLYNTLDMIYWMLDEKGQDQLGEVVLSLSHMFRYSSHWEEGADVSLREEVEQVGHYLTIIQARLEGRVSVDVNIEEQWLDIRLPKMTLQPLIENAVKHGLEPLHADTGGKLLVRAEEYGGVLSLHIIDNGVGMEYERWEVVQVALAEPGKQAGSGQAGGIGLQNLNLRLRHMFGEEYGLRISSTPGAGTTVTVSVPLPQKEEKHEYSDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED07</accession>
    <name>E3ED07_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yfhR3</name>
        <name evidence="2" type="ORF">PPSC2_04405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369510.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17235"/>
    <dbReference type="EnsemblBacteria" id="ADO54876">
        <property type="protein sequence ID" value="ADO54876"/>
        <property type="gene ID" value="PPSC2_04405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.880"/>
    <dbReference type="eggNOG" id="COG1073">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048353_3_2_9"/>
    <dbReference type="OMA" id="WSAVGYP"/>
    <dbReference type="OrthoDB" id="721431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="35"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="31314" checksum="E928989CE1D52304" modified="2011-01-11" version="1">MERQIGIRFEHEELAATIHYPNRTNEGGRQRRVPLVVICHGFVGNRIGVDRLFVKTARELAEGGYFVLRFDFAGCGESTGEYGKQGLESMINQTRTVLDYAVNCADIDPTKVTLIGHSLGGAVALLTAVRDKRVQNLVLWSAVGYPLNDIVKITERSVYDESVKTGHADYLGYKFTPAYFESLAQFQPFQEAVKFNGDVLVIHGTSDDIIPVDYAFLFQKVFWMRPEGRCDKEIIFQGDHTFSSGKERQQLIDRTLEWLDEQENIQRDWQHWMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED78</accession>
    <name>E3ED78_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Copper-exporting P-type ATPase</fullName>
            <ecNumber evidence="3">7.2.2.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">Copper-exporting P-type ATPase A</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="17">Cu(+)-exporting ATPase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="20" type="primary">copA</name>
        <name evidence="20" type="ORF">PPSC2_02330</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="20 21" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20 21">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + Cu(+)(in) + H2O = ADP + Cu(+)(out) + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:25792"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:49552"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="7.2.2.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 18">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.</text>
    </comment>
    <dbReference type="EC" id="7.2.2.8" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369075.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15095"/>
    <dbReference type="EnsemblBacteria" id="ADO54435">
        <property type="protein sequence ID" value="ADO54435"/>
        <property type="gene ID" value="PPSC2_02330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.444"/>
    <dbReference type="eggNOG" id="COG2217">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001771_0_3_9"/>
    <dbReference type="OMA" id="HWMLPAW"/>
    <dbReference type="OrthoDB" id="237367at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140581">
        <property type="term" value="F:P-type monovalent copper transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017969">
        <property type="entry name" value="Heavy-metal-associated_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006122">
        <property type="entry name" value="HMA_Cu_ion-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027256">
        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="SSF55008"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01525">
        <property type="entry name" value="ATPase-IB_hvy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00003">
        <property type="entry name" value="TIGR00003"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01047">
        <property type="entry name" value="HMA_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="18" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="13" id="KW-0186">Copper</keyword>
    <keyword evidence="10" id="KW-0187">Copper transport</keyword>
    <keyword evidence="14" id="KW-0406">Ion transport</keyword>
    <keyword evidence="15 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="11" id="KW-1278">Translocase</keyword>
    <keyword evidence="7 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 18" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="167"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="204"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="235"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="273"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="428"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="460"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="770"/>
            <end position="787"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="19">
        <location>
            <begin position="11"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="19">
        <location>
            <begin position="79"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00015102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00029719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00033239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ADO54435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="818" mass="87448" checksum="0DCFC88754C778C4" modified="2011-01-11" version="1">MENRATDGDKHTTLHITGMSCAACASRIEKGLNRIDGVAQANVNLALEQASISYDPKQVEIPEFRDKIASLGFGTVSEEANLNVTGMTCAACAARIEKGLNRIPGVTGASVNLAMETAHVEYAAGSTTVSDLVSKIEQLGYGAIPQSAEDNIADVRSKDIQRKKWKWMISAVLSLPLLWAMVAHFSFTSWIYVPELFLNPWFQLVLTTPIQFIIGWQFYVGAYKALRNGSSNMDVLVALGTSAAYFYSLYLTLRPSDAMEGMAGMPVTTMPELYYETSAVLITLILVGKWFEAVAKGRSSEAIKSLMNLQATTARVVRDGQELDLPIEQVRVKDIFIVRPGEKIPVDGVVVDGRSAVDESMLSGESLPVEKGEGSPVTGATLNKNGVLRIQAERVGGDTALARIIKVVEDAQNSKAPIQRIADQISGIFVPIVVAVAVITFLVWFFLVTPSDFAGSLEKMIAVLVIACPCALGLATPTSIMAGSGRAAEYGILFKGGEHLEMTRSVNAVILDKTGTVTNGKPELTDVIVRASSLAETDLLRLLGAAEKSSEHPLAEAIVKGIADRGIELVGPTDFENIPGYGVKASVEGKQVLVGTRRLMSREGITMDDSTEQQMNELEGAGKTAMLVAVDGSYAGLVAVADTIKETSREAIARLRAMNIEVIMITGDNERTAKAVAAEAGIERVLAEVLPEGKAEEVKRLQDQGKIVAMVGDGINDAPALATAHIGMAMGTGTDVAMEAADITLMRGNLNSIPDAIEMSRRTMTNIRQNLFWALGYNVIGIPIAALGFLAPWLAGAAMAFSSVSVVLNALRLQRVKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED80</accession>
    <name>E3ED80_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNAase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-591</name>
        <name evidence="1" type="ORF">PPSC2_02340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369077.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15105"/>
    <dbReference type="EnsemblBacteria" id="ADO54437">
        <property type="protein sequence ID" value="ADO54437"/>
        <property type="gene ID" value="PPSC2_02340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.446"/>
    <dbReference type="eggNOG" id="COG0084">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031506_5_2_9"/>
    <dbReference type="OMA" id="HFHWFKT"/>
    <dbReference type="OrthoDB" id="915852at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01310">
        <property type="entry name" value="TatD_DNAse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001130">
        <property type="entry name" value="TatD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01026">
        <property type="entry name" value="TatD_DNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005902">
        <property type="entry name" value="DNase_TatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="32165" checksum="32A084E399E8CB99" modified="2011-01-11" version="1">MNDWNMHSALRSNAAATVPLIDAHIHVDSYPPEQQELLLASLADNHVEAIIAVSMHLASSQANLRLAERWPRLVRPAFGFHPEQALPAHTELDLLFDWMDEHVQQMIAVGEVGLPYYNRIEASRSGEPFELAPYIALLERFIQFASKHSKPIVLHAVYEDADIACDLLERHDVTQAHFHWFKGSAATTKRMARNGYYVSFTPDLLYEEEIRSLARQYPSDQVMAETDGPWPFEGPFTGQQTHPRMTTEVIRAYSKLTHQDEAAVRQLFYDNTRRFYSLSDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDH2</accession>
    <name>E3EDH2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methionine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">metI1</name>
        <name evidence="7" type="ORF">PPSC2_04750</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369584.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17645"/>
    <dbReference type="EnsemblBacteria" id="ADO54951">
        <property type="protein sequence ID" value="ADO54951"/>
        <property type="gene ID" value="PPSC2_04750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.954"/>
    <dbReference type="eggNOG" id="COG2011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077375_0_1_9"/>
    <dbReference type="OMA" id="SYSTIMG"/>
    <dbReference type="OrthoDB" id="1464674at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="23"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="58"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="152"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="19"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="223" mass="24239" checksum="8F9731C1A470CE90" modified="2011-01-11" version="1">MNEMLSIIAQYQSEIWKAIGETFIMVGISIAAAVLLGLPAGTILYLCGKGQKYENRLLFTILNSVVNVIRSFPFLLLVVFMIPFTRLVVGTALGTMAATVPLSVVAIAYYSRLVEQSLLEVPKGVIEAATSMGASTLQLIFKFLYVEARSGLVLGLTTSTISFISYSTVMGIVGGGGVGDFAIRYGYQRFETGLMAFTIVVMIIFVQTIQFTGSTISRRIDKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDM6</accession>
    <name>E3EDM6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">MyH9</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">myH9</name>
        <name evidence="4" type="ORF">PPSC2_06520</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369965.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19485"/>
    <dbReference type="EnsemblBacteria" id="ADO55334">
        <property type="protein sequence ID" value="ADO55334"/>
        <property type="gene ID" value="PPSC2_06520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1343"/>
    <dbReference type="eggNOG" id="ENOG502ZBI7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_373755_0_0_9"/>
    <dbReference type="OMA" id="EVEYILY"/>
    <dbReference type="OrthoDB" id="1616960at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043756">
        <property type="entry name" value="DUF5702"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18960">
        <property type="entry name" value="DUF5702"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="314"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="250"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="738" mass="83643" checksum="D7A5AF5AC987DCF2" modified="2011-01-11" version="1">MFGKGRNTKDGESGAVTVFLILILAVMFGFIAVFIDYARIAALHVQTERLTHAAVRSVMSAYDPALQQEYGLFAYGEGGGEQIMVKVLNDSARRTARAETLPLMNMKLDSSSLQMERELGKYAIFNEQIREEMKYKAPVDFTMEVLEKLKPLSQNMKEASHTVDLLKRLQKLYDRREAKLDDMLEKQRKAGAYMEEVRKRIIKQRGTYMPNQYIWDPLEVVADIAAQYKHYVHVYEDNKKSVDDVKIMQMEKYTRRARKALDRLRQVMVQTGEEHDKLLLQAKEPLNEARQINEEMRKVIVQYKQRAANAGYDEVSAAPTPSGAGSNADPSVGSARQRAEDLLVPSNEFEQWEAGIEKQRIAINTANNRITSMMRTLSFYTDPFLNADMLKQEVASTLKEIDKYLNAYAWAGPANVLDGEARTMDTRRGPDKERKKMEREAKNKLKQAYRIIEVLSKGKQSAEQFRVVEQYYNESISFNQSSSSPSVSADLSYDTYDATGASMDSMDGLYEAASNLLIQLGDEFYQNEYALSYFHHVDFSRFGSLAGSGGNVGNAAQILGDQLEVNNQEVEYILYGFHNPTGNLAAAYGEIFAMRLAIRTMEGLVKNSSKGNPLVVLAAALLYGVEKAIEDMIMLAQKGDVPLSDFLKFRMTYKDHLRLFLMLHSNNERKMSRMLALIRLNTDVNPAERRTYAKGEVKNGMRLWFLPGVMKMLGTASKEGESIKGSVYYVTKTAHFSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS1</accession>
    <name>E3EDS1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Serine/threonine protein kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pknB1</name>
        <name evidence="1" type="ORF">PPSC2_06735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370010.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19700"/>
    <dbReference type="EnsemblBacteria" id="ADO55379">
        <property type="protein sequence ID" value="ADO55379"/>
        <property type="gene ID" value="PPSC2_06735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1386"/>
    <dbReference type="eggNOG" id="COG0515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_091250_1_0_9"/>
    <dbReference type="OMA" id="RWEHLVW"/>
    <dbReference type="OrthoDB" id="997658at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="226" mass="26047" checksum="F5D30FB685BABD48" modified="2011-01-11" version="1">MVEQWRQADDIISQVTVYSTEDNDPVSIKTATQGVRCIGIGTDAAVFTLDTLPGYAFKVYSDMAIEKKDAEADVYERLQGSDYFPHYYGKGDKYIVISYESGITLLDCLLQGIPVPEQVIEDVEKAREFVRSRGLNPRDIHLKNVLMQDGRAKVLDVSEYVKEGDDKRWEHLVWAYHTFYSGFSEVKVPSWILETIKKWYYKLDNSSINLEEFAQRASQLFSKWKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDV5</accession>
    <name>E3EDV5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Protein sspF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sspF</name>
        <name evidence="4" type="ORF">PPSC2_00165</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the alpha/beta-type SASP family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007428013.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13180"/>
    <dbReference type="EnsemblBacteria" id="ADO54021">
        <property type="protein sequence ID" value="ADO54021"/>
        <property type="gene ID" value="PPSC2_00165"/>
    </dbReference>
    <dbReference type="GeneID" id="66574931"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.32"/>
    <dbReference type="eggNOG" id="ENOG5032Y0E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_169738_3_0_9"/>
    <dbReference type="OMA" id="REGWGAI"/>
    <dbReference type="OrthoDB" id="2032801at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.10.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001448">
        <property type="entry name" value="SASP_alpha/beta-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018126">
        <property type="entry name" value="SASP_alpha/beta-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038300">
        <property type="entry name" value="SASP_sf_alpha/beta"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00269">
        <property type="entry name" value="SASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00304">
        <property type="entry name" value="SASP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0749">Sporulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6692" checksum="B8D224CA63633227" modified="2011-01-11" version="1">MSRRRRSVMSEELKYELAKDLGFYDTVKEEGWGGIKAKDAGNMVKRAIQLAEQAASRKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDX2</accession>
    <name>E3EDX2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Spore coat protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yabP</name>
        <name evidence="1" type="ORF">PPSC2_00245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368685.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13260"/>
    <dbReference type="EnsemblBacteria" id="ADO54038">
        <property type="protein sequence ID" value="ADO54038"/>
        <property type="gene ID" value="PPSC2_00245"/>
    </dbReference>
    <dbReference type="GeneID" id="66574916"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.48"/>
    <dbReference type="eggNOG" id="ENOG5032YWW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_168343_1_0_9"/>
    <dbReference type="OMA" id="FIEGQIY"/>
    <dbReference type="OrthoDB" id="1933806at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012504">
        <property type="entry name" value="Spore_YabP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022476">
        <property type="entry name" value="Spore_YabP/YqfC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038705">
        <property type="entry name" value="YabP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07873">
        <property type="entry name" value="YabP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF011576">
        <property type="entry name" value="YabP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02892">
        <property type="entry name" value="spore_yabP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0946">Virion</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="10513" checksum="F1F3321ABED830F7" modified="2011-01-11" version="1">MIEQGKSKHHDLRMQSRKQLDISGVSNVESFDSEEFLLQTELGHLTIRGQHLHIKNLSLEEGLLSIEGLITSLVYLEPGAPAKNGKSLFGKLFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE03</accession>
    <name>E3EE03_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATPase AAA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cysA1</name>
        <name evidence="2" type="ORF">PPSC2_02640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369123.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15405"/>
    <dbReference type="EnsemblBacteria" id="ADO54483">
        <property type="protein sequence ID" value="ADO54483"/>
        <property type="gene ID" value="PPSC2_02640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.492"/>
    <dbReference type="eggNOG" id="COG3910">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079631_2_0_9"/>
    <dbReference type="OMA" id="MSHGESF"/>
    <dbReference type="OrthoDB" id="1833499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038729">
        <property type="entry name" value="Rad50/SbcC_AAA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13304">
        <property type="entry name" value="AAA_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13476">
        <property type="entry name" value="AAA_23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="42"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="29048" checksum="80DF8CF3B10753FC" modified="2011-01-11" version="1">MSIWDRNLFIRRLELLWPPDADRSQYPFNLKALQQWNELKFHPSVTYIVGENGVGKSTLMEAIAVAWGFNPEGGTKNFNFSTQATHSSLHEHIRLVRGVEKPRDGFFFRAESYYNVATHIDELDREGGGRPIRDSYGGKSLHEQSHGESFFAAFVHRFGGQGLYILDEPEAALSPLRQMAMLARIHELVQQGSQFIISTHSPILMSYPDSVLYHLTHEGIDTRTLEETDHFIITKQFLNNKERLLQELFEDSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE45</accession>
    <name>E3EE45_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phnB5</name>
        <name evidence="2" type="ORF">PPSC2_02830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369165.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0541"/>
    <dbReference type="EnsemblBacteria" id="ADO54525">
        <property type="protein sequence ID" value="ADO54525"/>
        <property type="gene ID" value="PPSC2_02830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.536"/>
    <dbReference type="eggNOG" id="COG2764">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046006_17_5_9"/>
    <dbReference type="OMA" id="FFNAIHG"/>
    <dbReference type="OrthoDB" id="2051456at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyoxalase" evidence="1">
        <location>
            <begin position="7"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="13853" checksum="91E1E02BECC3AE19" modified="2011-01-11" version="1">MRSASPFVIVNDVQQSIDYYQSVLGGKIKVLNKQEGKLLHAELHLGSSHIHFSDSYGKPLKAQHVQIILDCESEDELKQAYYSLSEKGTITVELQDTFFGALHGEVTDHLNQIGWVMNYFKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEG7</accession>
    <name>E3EEG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370049.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19875"/>
    <dbReference type="EnsemblBacteria" id="ADO55418">
        <property type="protein sequence ID" value="ADO55418"/>
        <property type="gene ID" value="PPSC2_06905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1424"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133181_2_1_9"/>
    <dbReference type="OMA" id="HAEWIDS"/>
    <dbReference type="OrthoDB" id="1938459at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021257">
        <property type="entry name" value="DUF2809"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10990">
        <property type="entry name" value="DUF2809"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="18249" checksum="B4DDC8323BF0AE48" modified="2011-01-11" version="1">MRKFSKSSSRGINQEIKEKFHWKARAAYLVAVLVMILLGLGSRAFSTQLPAFVANHFGDALWACMIYFGLRMLWVNRQLSIALWGSMLFCFAIEFSQMYQTPWINHIRATTLGGLVLGKGFLTVDLIRYTVGIVVSWVLDQGCQRLVGINRRMDDDKPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEI6</accession>
    <name>E3EEI6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ypfP</name>
        <name evidence="7" type="ORF">PPSC2_07010</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyltransferase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55437.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19990"/>
    <dbReference type="CAZy" id="GT28">
        <property type="family name" value="Glycosyltransferase Family 28"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55437">
        <property type="protein sequence ID" value="ADO55437"/>
        <property type="gene ID" value="PPSC2_07010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1445"/>
    <dbReference type="eggNOG" id="COG0707">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028367_0_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009247">
        <property type="term" value="P:glycolipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009695">
        <property type="entry name" value="Diacylglyc_glucosyltr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06925">
        <property type="entry name" value="MGDG_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MGDG_synth" evidence="6">
        <location>
            <begin position="19"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_tran_28_C" evidence="5">
        <location>
            <begin position="207"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55437.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="379" mass="43443" checksum="ECE955CAC9AD95EA" modified="2015-05-27" version="2">MRVAKKRVLLLSEGFGAGHTQAAYALSSSLRKLSPDVQTRVLELGSFLNPRMAPLIITAYKKTVVSQPRLVGLVYRHQYKKSLNRLTTLALHRLFYTQTRNILRQLRPDLVVCTHPIPSAVISRLKRLGLHVPLCTVITDYDAHGTWISPEVDRYFVSTPEVMRKLRARGVPVSKIQVTGIPVHPNFWEHPGHDEIREQFGLKPIPTVLVMGGGWGLMNDEVIHRSLTDWREKIQFIFCLGHNDKIRRKMELDPRFNHPNIHIFGFTREIDKLMEVSNLLITKPGGMTCTEGLAKGIPMLFHKPLPGQEEENCQYFTAQGFGEPITSLDVVVKWMNRLLYDFPEIVRKRQEHIHNVARYYPLQSAQSILDILEPNRVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EES7</accession>
    <name>E3EES7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gamma-carboxymuconolactone decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yphJ</name>
        <name evidence="2" type="ORF">PPSC2_08475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55764.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599611.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21080"/>
    <dbReference type="EnsemblBacteria" id="ADO55764">
        <property type="protein sequence ID" value="ADO55764"/>
        <property type="gene ID" value="PPSC2_08475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1781"/>
    <dbReference type="eggNOG" id="COG0599">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070025_5_0_9"/>
    <dbReference type="OrthoDB" id="1792151at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="19"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55764.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="111" mass="12633" checksum="118C9622D1CD8810" modified="2015-05-27" version="2">MKHKLIRSSVREMIGNFAPAFVSYTEEVLFGDVWRRSELSLRERSLITVAALVAGEHVNQLPYHLNLAKENGISEEELIEVITQLAFYVGWPRAASAVQVAKDVFCKEKER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEW7</accession>
    <name>E3EEW7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Flagellar motor protein MotA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">motA1</name>
        <name evidence="10" type="ORF">PPSC2_00520</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MotA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368736.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13525"/>
    <dbReference type="EnsemblBacteria" id="ADO54090">
        <property type="protein sequence ID" value="ADO54090"/>
        <property type="gene ID" value="PPSC2_00520"/>
    </dbReference>
    <dbReference type="GeneID" id="66574863"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.101"/>
    <dbReference type="eggNOG" id="COG1291">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079895_0_0_9"/>
    <dbReference type="OMA" id="EIETHHQ"/>
    <dbReference type="OrthoDB" id="897037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000540">
        <property type="entry name" value="Flag_MotA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002898">
        <property type="entry name" value="MotA_ExbB_proton_chnl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01618">
        <property type="entry name" value="MotA_ExbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01307">
        <property type="entry name" value="MOTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0966">Cell projection</keyword>
    <keyword evidence="10" id="KW-0969">Cilium</keyword>
    <keyword evidence="10" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="35"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="183"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="MotA_ExbB" evidence="9">
        <location>
            <begin position="103"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="28908" checksum="F7A6ECDB88743484" modified="2011-01-11" version="1">MQITTIIGLVLGLLSLVVGMILKGAPVVNLVNNPAAYMIIFVGTAASIFMAFPMDDMKRVPKLFKIIFTQQKLLDRKELIGTFTEWASITRREGLLALESKVEEIDDPFMRGGMRMIIDGNDQEFVRDVLMEDINATEDRHRAGALIFSQAGMYAPTLGVLGAVVGLIAALADLSDMEKLSHAIAAAFIATLLGIFTGYVLWHPMSNKLKRLSKKEVELKLMMVEGLLSIQSGISTIAISQKLAIFLTPTERASMTQKDGDSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEX6</accession>
    <name>E3EEX6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">PTS glucose transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bglP3</name>
        <name evidence="5" type="ORF">PPSC2_00560</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368744.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13565"/>
    <dbReference type="EnsemblBacteria" id="ADO54099">
        <property type="protein sequence ID" value="ADO54099"/>
        <property type="gene ID" value="PPSC2_00560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.110"/>
    <dbReference type="eggNOG" id="COG2190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_5_3_9"/>
    <dbReference type="OMA" id="MIKKWKQ"/>
    <dbReference type="OrthoDB" id="1481289at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001127">
        <property type="entry name" value="PTS_EIIA_1_perm"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00358">
        <property type="entry name" value="PTS_EIIA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00830">
        <property type="entry name" value="PTBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51093">
        <property type="entry name" value="PTS_EIIA_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00371">
        <property type="entry name" value="PTS_EIIA_TYPE_1_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="PTS EIIA type-1" evidence="4">
        <location>
            <begin position="34"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="18039" checksum="D33E01B0E8D7C465" modified="2011-01-11" version="1">MFKWLKKKAAPRIEEFDMVAPIKGKVVSLEEVPDPAFSTKAMGDGIAIHPSEGRVTAPFAGKVAHVMEKSKHALIIEHESGVQVLIHVGINTVSLKGQGFNPHVKVGDSIKAGQLLMEFDLDAIQQGGLPVITPVIVPDGQEMISHVEILESSSATSDVPVLRVHLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEZ4</accession>
    <name>E3EEZ4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Arginine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Arginyl-tRNA synthetase</fullName>
            <shortName evidence="9">ArgRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">argS</name>
        <name evidence="13" type="synonym">argS1</name>
        <name evidence="13" type="ORF">PPSC2_00640</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg)</text>
            <dbReference type="Rhea" id="RHEA:20301"/>
            <dbReference type="Rhea" id="RHEA-COMP:9658"/>
            <dbReference type="Rhea" id="RHEA-COMP:9673"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78513"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.19"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 10">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.19" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368762.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13630"/>
    <dbReference type="EnsemblBacteria" id="ADO54117">
        <property type="protein sequence ID" value="ADO54117"/>
        <property type="gene ID" value="PPSC2_00640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.126"/>
    <dbReference type="eggNOG" id="COG0018">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006406_0_1_9"/>
    <dbReference type="OMA" id="YEFKWER"/>
    <dbReference type="OrthoDB" id="1146366at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004814">
        <property type="term" value="F:arginine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006420">
        <property type="term" value="P:arginyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00671">
        <property type="entry name" value="ArgRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00123">
        <property type="entry name" value="Arg_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001278">
        <property type="entry name" value="Arg-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005148">
        <property type="entry name" value="Arg-tRNA-synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036695">
        <property type="entry name" value="Arg-tRNA-synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035684">
        <property type="entry name" value="ArgRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008909">
        <property type="entry name" value="DALR_anticod-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11956">
        <property type="entry name" value="PTHR11956"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03485">
        <property type="entry name" value="Arg_tRNA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05746">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00750">
        <property type="entry name" value="tRNA-synt_1d"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01038">
        <property type="entry name" value="TRNASYNTHARG"/>
    </dbReference>
    <dbReference type="SMART" id="SM01016">
        <property type="entry name" value="Arg_tRNA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00836">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55190">
        <property type="entry name" value="SSF55190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00456">
        <property type="entry name" value="argS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Arg_tRNA_synt_N" evidence="12">
        <location>
            <begin position="7"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="DALR_1" evidence="11">
        <location>
            <begin position="439"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="9">
        <location>
            <begin position="134"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM01016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="559" mass="62504" checksum="D5F2887F6B9DB875" modified="2011-01-11" version="1">MTSNPLELINQKVTSAIEAAVLAAGIVSREELPTITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEDLIANMDLASASIESAEIAGPGFINFRLNKSYLYAVIGQVQEQGADYGRVQVGAGKKVQIEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGYQVTREYYINDAGNQIYNMSRSIEARYLQELGQPAEMPEDGYHGEDIIGFAKELVAEKGDSLLSMEPGDRAAYFREYGLEKELNKIKRDLERFRVPFDSWFSETSLYDNGEVLKALNELRDREEIYDKDGATWLNTTKYGDDKDRVLIKNDGTYTYLTPDIAYHRDKYARGYDTIINIWGADHHGYIPRMKAAMEALGNDPDKLKVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMEEVGVDAIRYFFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARACSVYRQAEEQGIAVLPLAEVDLSKLTAEHEYDLLRKIGELPEEVSVAAANFAPHRMIRYVYELASMFHSYYKAERVITEDAAQTQARLALFGAVRTTIANVLKLVGVSAPERM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF24</accession>
    <name>E3EF24_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ntrC</name>
        <name evidence="5" type="ORF">PPSC2_02910</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369183.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15725"/>
    <dbReference type="EnsemblBacteria" id="ADO54544">
        <property type="protein sequence ID" value="ADO54544"/>
        <property type="gene ID" value="PPSC2_02910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.553"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_0_9"/>
    <dbReference type="OMA" id="GVALMEW"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="2"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="433"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="527"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="550" mass="62293" checksum="F90A2B98C906E442" modified="2011-01-11" version="1">MKVLIVDDEKHVRHAIRMLVHWEAYGVTEVIEAESGDQAIEVITALSPPVVLTDMRMPGRDGVALMEWIQANSPATRVVVVSGYDDFELVRQAIRRGGMDYILKPVDPVEINEALSKATQAWRTAEQDRNRQTMQAMEVNRMRPHYADKLLTELISGTSLSITPLREELRLPPAIQVCNAAVMSTTQLDADILDKYKTRRALLGFSLMNICNEFLGTSQTGVAFRHLERTDEIILLYWGEPARWPVLLQDIHAGIRTALRCYMHIGIGSFGTFPVGAATAYQEARQALWKRDVLQATNWMHESSPARQTVRLPQLSEMEEELRLSALSCNASRVSMAVSSWMEAVAVLPSVTAEQLAGWNQELDWMLARWLNDRPGDTEGEELTDESNSIPALPVDNRGMLSLPLWKKQIENRLLAAGQALTPSHSPNNPTIRDIARYLDANYDEDISLQDIASRFYLSREYISRKFKQEYGVNLSDYLCQIRMGKAKLLLLNDKLRLHHIAGMVGYQDEKYFGKVFKKLEGVTPGEFRRRHSANPQPSSHITHDLPTHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF86</accession>
    <name>E3EF86_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-756</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-756</name>
        <name evidence="2" type="ORF">PPSC2_03195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369243.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16005"/>
    <dbReference type="EnsemblBacteria" id="ADO54606">
        <property type="protein sequence ID" value="ADO54606"/>
        <property type="gene ID" value="PPSC2_03195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.612"/>
    <dbReference type="eggNOG" id="ENOG5033C3C">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100574_0_0_9"/>
    <dbReference type="OMA" id="LSPVMWG"/>
    <dbReference type="OrthoDB" id="1097821at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="27312" checksum="8B808378F2DAE78F" modified="2011-01-11" version="1">MTIMKQAWMITRQDFRKNPYAALWTLLFIAYLGFTMSFAVSVQWGEHAALSPVADFIMLTLIPFLGFIYNRRAFKYLQEDSYTHMLAFFRTLPIPMKAVIMSRIQQAVLAFVANSVIFFALLFTLSGTLRVYASTGFFVSFALTWIGYGMLIQAIYIHLEFLKRGTEYFWLSIVIMLMCGMVTIIARVCGANLVSITASYSKEWLLLSPVMWGALLAGVLAMSVSYRVTQRKLMKRNLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFJ6</accession>
    <name>E3EFJ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydhR</name>
        <name evidence="2" type="ORF">PPSC2_07230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370114.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20210"/>
    <dbReference type="EnsemblBacteria" id="ADO55487">
        <property type="protein sequence ID" value="ADO55487"/>
        <property type="gene ID" value="PPSC2_07230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1493"/>
    <dbReference type="eggNOG" id="COG0514">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_825949_0_0_9"/>
    <dbReference type="OMA" id="APYFIAT"/>
    <dbReference type="OrthoDB" id="1130206at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010997">
        <property type="entry name" value="HRDC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002121">
        <property type="entry name" value="HRDC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044876">
        <property type="entry name" value="HRDC_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00570">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00341">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47819">
        <property type="entry name" value="SSF47819"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50967">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HRDC" evidence="1">
        <location>
            <begin position="105"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="38859" checksum="B3CF19513FF19171" modified="2011-01-11" version="1">MEIVFLNRLSKRNEQGCEDFAQVWIGQHEGGWSAGWSTHHVPDESIDDLWYEGSLWQELLHVYRHELALKMAEGYRPLIHGVFHEQAGSSGRGQTLQKLYCYSDLFPRDEVYEQLTMWRRQKAATERKAPYFIATNRLLRLISVFLPHTEEELLELPGMGLGKVSQYGTELLAITKQNDRTTPFPLNWVTEALEEEVFLSWLYKQKENQYRQELNKFSLTRAIVEGISDGLSLEHIGMKAGLHRREMIEAVEHLDRDGMDMEKLICTELAHVSEEEQAAICSAYAELGDTLLKPIMLKVYGEEKATEAGLDQIYERLRLIRIRFRHQEVPDQHVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFK5</accession>
    <name>E3EFK5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">K(+)/H(+) antiporter subunit KhtT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">trkA1</name>
        <name evidence="2" type="ORF">PPSC2_07275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370123.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20250"/>
    <dbReference type="EnsemblBacteria" id="ADO55496">
        <property type="protein sequence ID" value="ADO55496"/>
        <property type="gene ID" value="PPSC2_07275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1502"/>
    <dbReference type="eggNOG" id="COG0490">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116143_1_0_9"/>
    <dbReference type="OMA" id="EGAYFQP"/>
    <dbReference type="OrthoDB" id="941006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026278">
        <property type="entry name" value="K(+)/H(+)_antiporter_KhtT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006037">
        <property type="entry name" value="RCK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02080">
        <property type="entry name" value="TrkA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005028">
        <property type="entry name" value="KhtT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51202">
        <property type="entry name" value="RCK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RCK C-terminal" evidence="1">
        <location>
            <begin position="74"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="164" mass="18510" checksum="C25A1AC1F8110F57" modified="2011-01-11" version="1">MDIRESILPGIGIKYRIDAESGDRIVIIIHDDGRRELYHFDYENLEQSISMTTLNDQEARLVASIIGGMTYKPKQLESVEMTFDDFIIEWYRVESHYASVGKSIGELDVRQNSGATVIAIVEKKGKKYVNPGPEVIISDDATVVVVGERDQQKRFKQILMNGSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT2</accession>
    <name>E3EFT2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Integrin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370423.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55804">
        <property type="protein sequence ID" value="ADO55804"/>
        <property type="gene ID" value="PPSC2_08650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1822"/>
    <dbReference type="eggNOG" id="ENOG5032TQ1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147999_0_0_9"/>
    <dbReference type="OMA" id="TLCLFDT"/>
    <dbReference type="OrthoDB" id="1721163at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007229">
        <property type="term" value="P:integrin-mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045665">
        <property type="entry name" value="DUF6386"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19923">
        <property type="entry name" value="DUF6386"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0401">Integrin</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="16365" checksum="27D30433BF6AFB4E" modified="2011-01-11" version="1">MMNMAISPFQFTTDTATLCLFDTQALKHRLNDEPDWWSIEADELGELNAGNAAFLNLGADGTYEVVITDHIEQPTVRLFLKVPSGNIFIGAGEEATGGELEPDCVWGGSFLSVQPGLYECLASRGENNRIYLSLKKGSEGSNSFTSLVRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFZ3</accession>
    <name>E3EFZ3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Ribonuclease 3</fullName>
            <ecNumber evidence="10">3.1.26.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Ribonuclease III</fullName>
            <shortName evidence="10">RNase III</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">rnc</name>
        <name evidence="14" type="synonym">rncS</name>
        <name evidence="14" type="ORF">PPSC2_09690</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>Endonucleolytic cleavage to 5'-phosphomonoester.</text>
            <dbReference type="EC" id="3.1.26.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ribonuclease III family.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.3" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309856.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22155"/>
    <dbReference type="EnsemblBacteria" id="ADO56026">
        <property type="protein sequence ID" value="ADO56026"/>
        <property type="gene ID" value="PPSC2_09690"/>
    </dbReference>
    <dbReference type="GeneID" id="66578000"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2042"/>
    <dbReference type="eggNOG" id="COG0571">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000907_1_3_9"/>
    <dbReference type="OMA" id="LTHKSCK"/>
    <dbReference type="OrthoDB" id="1890943at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004525">
        <property type="term" value="F:ribonuclease III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00593">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00104">
        <property type="entry name" value="RNase_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014720">
        <property type="entry name" value="dsRBD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011907">
        <property type="entry name" value="RNase_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000999">
        <property type="entry name" value="RNase_III_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036389">
        <property type="entry name" value="RNase_III_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11207">
        <property type="entry name" value="PTHR11207"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00035">
        <property type="entry name" value="dsrm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14622">
        <property type="entry name" value="Ribonucleas_3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00358">
        <property type="entry name" value="DSRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00535">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69065">
        <property type="entry name" value="SSF69065"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02191">
        <property type="entry name" value="RNaseIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50137">
        <property type="entry name" value="DS_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00517">
        <property type="entry name" value="RNASE_3_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50142">
        <property type="entry name" value="RNASE_3_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="8 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 10" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6 10" id="KW-0540">Nuclease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 10 11" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 10" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="10" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5 10" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="RNase III" evidence="13">
        <location>
            <begin position="5"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="DRBM" evidence="12">
        <location>
            <begin position="160"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO56026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="26300" checksum="4C8FC249523CAB41" modified="2011-01-11" version="1">MSGDLKQLQQKLHIQFNNRQLLKQAFTHASYVNEHRFSQHADNERLEFLGDAVLELTVSEQLYNQYPNRPEGELTKLRAAIVCEPSLVKFAVGLEFGQYVLLGKGEELTGGRTRPALLADVFEAFVGALYLDQGLEAVRSFLERYIFPQIVLNGKLQMSDFKTELQELTQHHNMGMLEYKIVEERGPAHEREFVAEVYMDSERLGAGTGRSKKEAEQQAAAVALNRLKLAES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG43</accession>
    <name>E3EG43_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">Flagellar biosynthetic protein FliP</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 14" type="primary">fliP</name>
        <name evidence="14" type="ORF">PPSC2_09935</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Plays a role in the flagellum-specific transport system.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
            <topology evidence="12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="12">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the FliP/MopC/SpaP family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309901.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22405"/>
    <dbReference type="EnsemblBacteria" id="ADO56076">
        <property type="protein sequence ID" value="ADO56076"/>
        <property type="gene ID" value="PPSC2_09935"/>
    </dbReference>
    <dbReference type="GeneID" id="66577928"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2093"/>
    <dbReference type="eggNOG" id="COG1338">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042028_0_1_9"/>
    <dbReference type="OMA" id="MPPNQIL"/>
    <dbReference type="OrthoDB" id="1049349at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005837">
        <property type="entry name" value="FliP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005838">
        <property type="entry name" value="T3SS_IM_P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30587">
        <property type="entry name" value="PTHR30587"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30587:SF0">
        <property type="entry name" value="PTHR30587:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00813">
        <property type="entry name" value="FliP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00951">
        <property type="entry name" value="FLGBIOSNFLIP"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01302">
        <property type="entry name" value="TYPE3IMPPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01103">
        <property type="entry name" value="fliP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01060">
        <property type="entry name" value="FLIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01061">
        <property type="entry name" value="FLIP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="7 12" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="11 12" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="5 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0966">Cell projection</keyword>
    <keyword evidence="14" id="KW-0969">Cilium</keyword>
    <keyword evidence="14" id="KW-0282">Flagellum</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0732">Signal</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 12" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168890" description="Flagellar biosynthetic protein FliP" evidence="13">
        <location>
            <begin position="26"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="49"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="92"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="193"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="229"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU362069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO56076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="27722" checksum="A6833CE55ECFB379" modified="2011-01-11" version="1">MRKKIILACLLLVLFSFISVTAASAEPIPNIDIQVGNSDKGQPGATSLSIILLITVISVAPALLVLMTSFTRIVIVLGFVRTSLGTQQMPPNQVLVGLALFLTLFIMAPTFSAMNETALQPYLKGDITQSQALDKASVPIKTFMFSHTREKDLLLFMKYTKMEKPKNYQDIPLTVMVPAYAISELKTAFQMGFMIFIPFLVIDIVVSSTLMAMGMMMLPPVMISLPFKILLFVLVDGWYLVVKSLLLSFNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGD0</accession>
    <name>E3EGD0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Imidazole glycerol phosphate synthase subunit HisF</fullName>
            <ecNumber evidence="9">4.3.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">IGP synthase cyclase subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">IGP synthase subunit HisF</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">ImGP synthase subunit HisF</fullName>
            <shortName evidence="9">IGPS subunit HisF</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">hisF</name>
        <name evidence="11" type="ORF">PPSC2_00875</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + L-glutamine = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate + H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24793"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="ChEBI" id="CHEBI:58525"/>
            <dbReference type="EC" id="4.3.2.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 5/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 9">Heterodimer of HisH and HisF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9 10">Belongs to the HisA/HisF family.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.10" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368802.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13865"/>
    <dbReference type="EnsemblBacteria" id="ADO54158">
        <property type="protein sequence ID" value="ADO54158"/>
        <property type="gene ID" value="PPSC2_00875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.163"/>
    <dbReference type="eggNOG" id="COG0107">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048577_4_0_9"/>
    <dbReference type="OMA" id="IFHYKET"/>
    <dbReference type="OrthoDB" id="1522718at2"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000107">
        <property type="term" value="F:imidazoleglycerol-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04731">
        <property type="entry name" value="HisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01013">
        <property type="entry name" value="HisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006062">
        <property type="entry name" value="His_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004651">
        <property type="entry name" value="HisF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00977">
        <property type="entry name" value="His_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00735">
        <property type="entry name" value="hisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 10" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7 9 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="9">
        <location>
            <position position="11"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="26894" checksum="73BFB9AF0A7AE92B" modified="2011-01-11" version="1">MLAKRIIPCLDVKDGRVVKGVNFVNLRDAGDPVELAALYDQEGADEIVFLDISASVEGRATMEEVVRQTAGEIAIPFTVGGGISHVDDMKRILRAGADKIGVNTAAVRNPQLIAEGARSFGSQCIVVAIDAKYNEAWGEWEVYTHGGRTPSGIRALAWAKEAEQLGAGEILLTSMNADGTKDGFDLPLTSAVSDIVGIPVIASGGAGKQEHFYDVFTSGKADAGLAATIFHYKEIGIPELKRDLKRRGVEIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGD2</accession>
    <name>E3EGD2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">Histidinol-phosphatase</fullName>
            <shortName evidence="7">HolPase</shortName>
            <ecNumber evidence="4 7">3.1.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">hisJ1</name>
        <name evidence="9" type="ORF">PPSC2_00885</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H2O + L-histidinol phosphate = L-histidinol + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14465"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57699"/>
            <dbReference type="ChEBI" id="CHEBI:57980"/>
            <dbReference type="EC" id="3.1.3.15"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 8/9.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the PHP hydrolase family. HisK subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.15" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368804.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13875"/>
    <dbReference type="EnsemblBacteria" id="ADO54160">
        <property type="protein sequence ID" value="ADO54160"/>
        <property type="gene ID" value="PPSC2_00885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.165"/>
    <dbReference type="eggNOG" id="COG1387">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054611_2_0_9"/>
    <dbReference type="OMA" id="KRIGHIT"/>
    <dbReference type="OrthoDB" id="1615112at2"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004401">
        <property type="term" value="F:histidinol-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010140">
        <property type="entry name" value="Histidinol_P_phosphatase_HisJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004013">
        <property type="entry name" value="PHP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21039">
        <property type="entry name" value="PTHR21039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02811">
        <property type="entry name" value="PHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="SSF89550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01856">
        <property type="entry name" value="hisJ_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHP" evidence="8">
        <location>
            <begin position="4"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU366003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="31548" checksum="1FF8A67EFCEBD371" modified="2011-01-11" version="1">MKIDYHTHHSRCGHAIGSLEEYVQQGIRLGLDQLGLSDHMPLLHVEPANYYPEMAMPMDELPRYVEECLDLKERYKGQIDIRVGLEGDYIEGWEREIEDIVHAYPWDYVIGSVHFLGEWDVTDFRQVHHWEGKNVLEVYRTYYDAVSKAAATGLYDIMGHLDVIKRFGYHPKPEEEEELRELERSALSAVARSGRAMELNASGLSKPCAEMFPSRRMLEQAFTLGIPLTIGSDAHDPAKLTEHLEKARALLHEVGYRELAVFEQRERSQVPLTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGI7</accession>
    <name>E3EGI7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Lysozyme</fullName>
            <ecNumber evidence="2 7">3.2.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">murA1</name>
        <name evidence="8" type="ORF">PPSC2_03280</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>Hydrolysis of (1-&gt;4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.</text>
            <dbReference type="EC" id="3.2.1.17"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the glycosyl hydrolase 24 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.17" evidence="2 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369263.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0643"/>
    <dbReference type="CAZy" id="GH24">
        <property type="family name" value="Glycoside Hydrolase Family 24"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54626">
        <property type="protein sequence ID" value="ADO54626"/>
        <property type="gene ID" value="PPSC2_03280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.634"/>
    <dbReference type="eggNOG" id="COG3772">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_091641_3_2_9"/>
    <dbReference type="OrthoDB" id="1703032at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030430">
        <property type="term" value="C:host cell cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003796">
        <property type="term" value="F:lysozyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019835">
        <property type="term" value="P:cytolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00737">
        <property type="entry name" value="lyz_endolysin_autolysin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.530.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033907">
        <property type="entry name" value="Endolysin_autolysin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002196">
        <property type="entry name" value="Glyco_hydro_24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023347">
        <property type="entry name" value="Lysozyme_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00959">
        <property type="entry name" value="Phage_lysozyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0929">Antimicrobial</keyword>
    <keyword evidence="4 7" id="KW-0081">Bacteriolytic enzyme</keyword>
    <keyword evidence="7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-1035">Host cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="200" mass="21862" checksum="0B5756B80967F70D" modified="2011-01-11" version="1">MANFSLGTDGAKLIKKHEGFSLKFYGDPYGYPTVGWGHLITKSKVYTKNTTGNPNDSLLSQVQADALSKSLNLGYTSPISQSKANTFFSNDTASAVAAVNNLVLPSGHKFSQSQFDALVSLTFNAGPGVLKTNDVKAMLANAHIYPTFVGPLSQSQIDTCSKLVSKAFSYDRNLQKRRNEEATLFCKGRKYTHKYPVYTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK6</accession>
    <name>E3EGK6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GTP cyclohydrolase 1 type 2 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ybgI</name>
        <name evidence="3" type="ORF">PPSC2_03355</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GTP cyclohydrolase I type 2/NIF3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369282.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16150"/>
    <dbReference type="EnsemblBacteria" id="ADO54645">
        <property type="protein sequence ID" value="ADO54645"/>
        <property type="gene ID" value="PPSC2_03355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.655"/>
    <dbReference type="eggNOG" id="COG0327">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089937_1_0_9"/>
    <dbReference type="OMA" id="WETPEYV"/>
    <dbReference type="OrthoDB" id="502462at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002678">
        <property type="entry name" value="DUF34/NIF3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036069">
        <property type="entry name" value="DUF34/NIF3_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13799">
        <property type="entry name" value="PTHR13799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01784">
        <property type="entry name" value="NIF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102705">
        <property type="entry name" value="SSF102705"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="29561" checksum="96712932A82951EE" modified="2011-01-11" version="1">MIMTMGQMVIHLTKGIDIPNTTVDLLNPELRDTEIQGIVTAFCASQYVIEQAISLGANFIITHEGMYYSHHGIQECLLHDPVYLHKSRLVADSGVGIYRFHDTIHRYQPDGVMVGLLQVLDWHPYVVKQQPSSAILAIPAMEVKEIAEYMKAKLHIRYVRVAGEVSMPCERVGILVGYRGGGELAIPLFLHENVDLVIAGEGPEWETPEYVKDAVYQGQNKALIMLGHAESEAPGMKYLADTLSLQFPTLPVYFVEDRPVFEIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGT3</accession>
    <name>E3EGT3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gcn5-related n-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yrkN1</name>
        <name evidence="2" type="ORF">PPSC2_05735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369799.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1187"/>
    <dbReference type="EnsemblBacteria" id="ADO55167">
        <property type="protein sequence ID" value="ADO55167"/>
        <property type="gene ID" value="PPSC2_05735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1173"/>
    <dbReference type="eggNOG" id="COG0454">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096795_1_0_9"/>
    <dbReference type="OMA" id="NEVDFLY"/>
    <dbReference type="OrthoDB" id="1983082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="21304" checksum="D35F1E62268DEA74" modified="2011-01-11" version="1">MTKQNEQITIAPVPQEELAIFKGELQEAFMKGLQDSFQEAEDPTEMGPIPSDEDFEHSLTAKDSVVRQIVLNGERIGGIVLKINPDTQRNEVDFLYTKANAHGKGLGTKAWEAIEAAFPKTKVWELHTPYFEKRNIHFYVNKCGFKIVEFYHRGNPGPSIEGEEPESDADYEFFRFEKVMTKESSEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGY5</accession>
    <name>E3EGY5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">msbA5</name>
        <name evidence="10" type="ORF">PPSC2_07500</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370172.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20470"/>
    <dbReference type="EnsemblBacteria" id="ADO55545">
        <property type="protein sequence ID" value="ADO55545"/>
        <property type="gene ID" value="PPSC2_07500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1550"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="MYEDALF"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="81"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="156"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="182"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="276"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="42"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="364"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="398"/>
            <end position="405"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="633" mass="71716" checksum="D4AE7198FF5899BC" modified="2011-01-11" version="1">MSQSKGQTSDLVSLSYKNIFRTFLFWPRIFRLLWDTHPSFLIAILITNLLKGAIPAAILLATRELINSVVAGASGGRFQPAFIAFGVLIGVNLVYDLINIGESFFRKMFQSRLSNQVNIKIIEKAQKMSLQSFEDADVQNMLQRAQGEADYRPFEIFTQILAIISSVVTLFSTGAILIAWRWWAFLFIFLIPCLSFYSFLRIGQREFNVHFQRAGRQRESWYLSFLVTRDNSFKEVKIFQLGDYLRKRYKTILEGFYREDKVLAVRRSYTSLAFQIVNQGACAFIIFMAIQATYVGQILVGNLVSLIQGITLTQSTSQSIVQGILSLCQNNLYIKQLFDFLDMPEEAKIQKSVQPLPLSVIHSIEFRNVSFKYPNTEENAISNVSFTLHQGEKLAIVGRNGSGKSTIVKLLTHLYSNFEGEIRINGHSIHELDKDSFRGKIGVVFQDFVHYEMSVRDNIGFGHVASRENDEVIWAAIDKAGITDLVAGLPDKLNTLLGKWFEDGQQLSGGQWQRIAIARAFMRNADIYVLDEPSSFLDPHAEKEVFQKFGQLVHERIGVFISHRLSSARMADTIILMEEGRIVEAGSHEHLMDMDGVYAEMFRLQASSYLSQGESDLEEEKLSPSLVRATGGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH05</accession>
    <name>E3EH05_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fe3+-citrate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cbrA5</name>
        <name evidence="4" type="ORF">PPSC2_07590</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370192.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20555"/>
    <dbReference type="EnsemblBacteria" id="ADO55565">
        <property type="protein sequence ID" value="ADO55565"/>
        <property type="gene ID" value="PPSC2_07590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1569"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_10_1_9"/>
    <dbReference type="OMA" id="GIWMFGG"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168952" evidence="2">
        <location>
            <begin position="26"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="3">
        <location>
            <begin position="63"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="331" mass="35745" checksum="1255BD5307831E15" modified="2011-01-11" version="1">MKKMLNGLLLFVVFAIVLAGCGSAGDSSKTEGAAGSEQTSTAAGPVTVKDDHGEVKLDKPAERVVVLEWTFTEDLIALGVQPVGNADNENYKLWVTPEAKLADTVTDIGTRGEPNLEAIAALKPDLIISNADNNAAIYAQLKGIAPTIEFDPYKGNGYDYDRMVEIFKQVAVATGKTEQADKVLSELDQHYVEAKATLEKAGKADFHYALTQAFTSQNAASLRMFKENSVVVGTLAKIGMVNDWKSDQTEKYGFSTVGIEALPAVQDSNFIYITQKTDDIFGAAMKNNTVWNGLNFVKEKRTYPLDGTTWTFGGPISSKVLVDQVVGALTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH42</accession>
    <name>E3EH42_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370229.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55602">
        <property type="protein sequence ID" value="ADO55602"/>
        <property type="gene ID" value="PPSC2_07745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1609"/>
    <dbReference type="HOGENOM" id="CLU_1738725_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="17430" checksum="ABA827BD2365D9EC" modified="2011-01-11" version="1">MKLYIAGINHNDPVSRTGLIQWLHEIKAGNKTEPDFIASEWDEEVYTKVAAQRSYLSQLIEKEWPDLNQRQIESISKTLAFEGDSHKGIFDNVNVLWLDHSRDVDQEAVGKFAILRLQTLKMHCNNDAKFNFIEELSRNLKKSECIVKHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH96</accession>
    <name>E3EH96_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">DNA polymerase IV</fullName>
            <shortName evidence="12">Pol IV</shortName>
            <ecNumber evidence="12">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">dinB</name>
        <name evidence="14" type="synonym">yqjH</name>
        <name evidence="14" type="ORF">PPSC2_09045</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="12">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 12">Belongs to the DNA polymerase type-Y family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370505.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21515"/>
    <dbReference type="EnsemblBacteria" id="ADO55887">
        <property type="protein sequence ID" value="ADO55887"/>
        <property type="gene ID" value="PPSC2_09045"/>
    </dbReference>
    <dbReference type="GeneID" id="66578129"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1905"/>
    <dbReference type="eggNOG" id="COG0389">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012348_1_1_9"/>
    <dbReference type="OMA" id="KVRRYDF"/>
    <dbReference type="OrthoDB" id="442163at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd03586">
        <property type="entry name" value="PolY_Pol_IV_kappa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01113">
        <property type="entry name" value="DNApol_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036775">
        <property type="entry name" value="DNA_pol_Y-fam_lit_finger_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017961">
        <property type="entry name" value="DNA_pol_Y-fam_little_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022880">
        <property type="entry name" value="DNApol_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024728">
        <property type="entry name" value="PolY_HhH_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001126">
        <property type="entry name" value="UmuC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00817">
        <property type="entry name" value="IMS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11799">
        <property type="entry name" value="IMS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11798">
        <property type="entry name" value="IMS_HHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100879">
        <property type="entry name" value="SSF100879"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50173">
        <property type="entry name" value="UMUC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 12" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 12" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 12" id="KW-0235">DNA replication</keyword>
    <keyword evidence="12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9 12" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="8 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 12" id="KW-0515">Mutator protein</keyword>
    <keyword evidence="4 12" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="UmuC" evidence="13">
        <location>
            <begin position="15"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="19"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="site" description="Substrate discrimination" evidence="12">
        <location>
            <position position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO55887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="426" mass="47543" checksum="653AC8F57759E867" modified="2011-01-11" version="1">MKDVSAYYPVGGRVILHVDMNAFYCSVHAAEEPEKYKGLPTAVAGSSELRKGVIVTCSYEARRLGISTGMVVQQARRICPQLIIIQPDFHLYRRYSKAFMSIAYSYTPMLEATSIDECYLDISGSKQFGTPLDIAEEIQRRVEEELGLPCSIGVAPNKLLAKMASDLKKPRGISVLRLRDVPNILWNLPCGQLFGVGRKTADKLLQMNIRTIGQLAKADEHMLVSIFGVTGSWLKLAANGINHSQVSTEREPNKSIGHTTTLPMDVVKLEEAQRVLLNISDQVARRLRRQGMLAGGIQLTIRTPDMKTFTRSQVRSTPTESAEDIYKEACALYRRHWGEDKPVRLLGITLQQLIPKEEAAVQLDLFEYQDQPKKESLLKTMDALRDKFGENAILTAGMLGDDPSVLLRNSKLRGTSLQKDNLPTPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHB8</accession>
    <name>E3EHB8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptide methionine sulfoxide reductase MsrA</fullName>
            <shortName evidence="4">Protein-methionine-S-oxide reductase</shortName>
            <ecNumber evidence="4">1.8.4.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Peptide-methionine (S)-S-oxide reductase</fullName>
            <shortName evidence="4">Peptide Met(O) reductase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">msrA</name>
        <name evidence="6" type="synonym">msrB</name>
        <name evidence="6" type="ORF">PPSC2_09140</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-dithiol + L-methionine (S)-S-oxide</text>
            <dbReference type="Rhea" id="RHEA:19993"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58772"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 4">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:14217"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MsrA Met sulfoxide reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.11" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370526.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21610"/>
    <dbReference type="EnsemblBacteria" id="ADO55909">
        <property type="protein sequence ID" value="ADO55909"/>
        <property type="gene ID" value="PPSC2_09140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1927"/>
    <dbReference type="eggNOG" id="COG0225">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031040_10_1_9"/>
    <dbReference type="OMA" id="GYCAFVV"/>
    <dbReference type="OrthoDB" id="1554384at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033744">
        <property type="term" value="F:L-methionine:thioredoxin-disulfide S-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008113">
        <property type="term" value="F:peptide-methionine (S)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01401">
        <property type="entry name" value="MsrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002569">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036509">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01625">
        <property type="entry name" value="PMSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55068">
        <property type="entry name" value="SSF55068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00401">
        <property type="entry name" value="msrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PMSR" evidence="5">
        <location>
            <begin position="3"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="170" mass="19700" checksum="3187BE3207F10539" modified="2011-01-11" version="1">MEKATFAGGCFWCMVTPFEEQPGIHSIVSGYTGGTISDPTYEQVKTGTTGHYEVVQITFDPELFPYEKLLELYWPQTDPTDGEGQFQDRGTQYKPAIFYHTEQQRELAQQSKEQLAQSGRFDKPIVTEILPAAIFYPAEDYHQDYHKKNVKHYKEDRAQSGRDEFIDKNW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHF1</accession>
    <name>E3EHF1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">1-deoxy-D-xylulose 5-phosphate reductoisomerase</fullName>
            <shortName evidence="7">DXP reductoisomerase</shortName>
            <ecNumber evidence="7">1.1.1.267</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">1-deoxyxylulose-5-phosphate reductoisomerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">2-C-methyl-D-erythritol 4-phosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">dxr</name>
        <name evidence="11" type="ORF">PPSC2_10060</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>2-C-methyl-D-erythritol 4-phosphate + NADP(+) = 1-deoxy-D-xylulose 5-phosphate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:13717"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
            <dbReference type="ChEBI" id="CHEBI:58262"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.267"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="1 7">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 1/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the DXR family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.267" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370714.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22530"/>
    <dbReference type="EnsemblBacteria" id="ADO56104">
        <property type="protein sequence ID" value="ADO56104"/>
        <property type="gene ID" value="PPSC2_10060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2120"/>
    <dbReference type="eggNOG" id="COG0743">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035714_4_0_9"/>
    <dbReference type="OMA" id="PIDSEHF"/>
    <dbReference type="OrthoDB" id="1200722at2"/>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00092"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030604">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
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        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
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        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="DXP_reductoisomerase"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="DXPR_C_sf"/>
    </dbReference>
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        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30525">
        <property type="entry name" value="PTHR30525"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08436">
        <property type="entry name" value="DXP_redisom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02670">
        <property type="entry name" value="DXP_reductoisom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13288">
        <property type="entry name" value="DXPR_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006205">
        <property type="entry name" value="Dxp_reductismrs"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69055">
        <property type="entry name" value="SSF69055"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00243">
        <property type="entry name" value="Dxr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 7" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 7" id="KW-0521">NADP</keyword>
    <keyword evidence="5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DXP_reductoisom" evidence="8">
        <location>
            <begin position="4"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="DXP_redisom_C" evidence="9">
        <location>
            <begin position="143"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="DXPR_C" evidence="10">
        <location>
            <begin position="258"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="7"/>
            <end position="36"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="379" mass="41279" checksum="A2D3A3729CFAD8D4" modified="2011-01-11" version="1">MKRITVLGSTGSIGTQTLDVVSMHPDQFTVEALAGGSNVKLLAEQAHLYHPKKVSVGTQQLADEIRPLLPSGIELHWGNEGLVELAANTEADMVVTAVMGSVGLHSTLAAIEAGKQIGLANKETLVTAGHLVTARARAKGVPLLPIDSEHSAIFQCLNGERMKDVAHITLTASGGSFRDLTREQLREVTVEDALKHPNWSMGAKITIDSATMVNKGLEVIEAHWLFGLSYEQIHVLLHPESIIHSYVEFQDTSIVAQLGNPDMRVPIQYALTYPERMKSPAKPLSLAEVGKLHFKEMDFNRFPCLRLAFECGKMGGTAPTAFNAANEIAVARFLRGEISFLHIEAIIEQVLEQHVNMADPDLSAIETCDRETRSIAAEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH0</accession>
    <name>E3EHH0_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Dipicolinate synthase subunit A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dapA1</name>
        <name evidence="3" type="ORF">PPSC2_10150</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22620"/>
    <dbReference type="EnsemblBacteria" id="ADO56123">
        <property type="protein sequence ID" value="ADO56123"/>
        <property type="gene ID" value="PPSC2_10150"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="1871452at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="entry name" value="AlaDH/PNT_NAD(H)-bd"/>
    </dbReference>
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        <property type="entry name" value="Dipicolinic_acid_synth_A"/>
    </dbReference>
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        <property type="entry name" value="DpaA_N"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF51735"/>
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        <property type="entry name" value="spore_dpaA"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DpaA_N" evidence="2">
        <location>
            <begin position="6"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="AlaDh_PNT_C" evidence="1">
        <location>
            <begin position="149"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="32131" checksum="3841E62B41155C6C" modified="2011-01-11" version="1">MLTGMRIVVLGGDARQLEVIRKCVDMDATVTVVGFDMLEVPLKGVTLEPMSVKLLESSDALILPVVGCDEEGNVNALFGAQKLQFLNEHAAALPPHCVVYTGMARAYLKEICTRHELKLVELLERDDVAIYNSIPTAEGALMMAIQHTDFTIHGADCMVLGMGRTGFTMARALQGLGAKVKVGVRRAEDAARAVEMGWKPFMTRDLANETKGVDLIFNTIPSMIITAQILSKLPLSTVIIDLASAPGGCDFRYAEKRGIKAMLAPGLPGIVAPKTAGAIIANTLVQLLMEDNPDRGDAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHL6</accession>
    <name>E3EHL6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yrpG</name>
        <name evidence="2" type="ORF">PPSC2_10835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2306"/>
    <dbReference type="EnsemblBacteria" id="ADO56278">
        <property type="protein sequence ID" value="ADO56278"/>
        <property type="gene ID" value="PPSC2_10835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2295"/>
    <dbReference type="eggNOG" id="COG0667">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_0_9"/>
    <dbReference type="OMA" id="HIELYQM"/>
    <dbReference type="OrthoDB" id="1351747at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="15"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="35737" checksum="28142CB50F32FD97" modified="2011-01-11" version="1">MEYSYLGKSGLKVSRLCLGTMNFGPETEEKDAFKIMDAALDAGINFFDTANVYGHDRKGWTEEIIGRWFQQGGGRREKVVLATKVYGDMKNENDGPNAGSGLSAYKIRRHLDASLKRLQTDHVELYQMHHIDRNVSWDELWGAFESVVDRGQVGYIGSSNFAGWHIAVAQAEAKARRFLGLVSEQHLYNLNERSAELEVLPAAQELGLGVIPWSPLAGGLLGRNALAGTGSRSARAKEKVEQNRAKLEQFAALSRELGEKEDVIALAWVLSHPAVTAPIIGPRTLEQLEDALRVPEVKLSEDVLAKLDEIFPGPGKPAPEAYAW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHR6</accession>
    <name>E3EHR6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">von Willebrand factor A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">vWFA2</name>
        <name evidence="4" type="ORF">PPSC2_11065</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370934.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23455"/>
    <dbReference type="EnsemblBacteria" id="ADO56328">
        <property type="protein sequence ID" value="ADO56328"/>
        <property type="gene ID" value="PPSC2_11065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2345"/>
    <dbReference type="eggNOG" id="COG2304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_640438_0_0_9"/>
    <dbReference type="OMA" id="PYIARQI"/>
    <dbReference type="OrthoDB" id="872565at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00092">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="41"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="309"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="338"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="370"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="domain" description="VWFA" evidence="3">
        <location>
            <begin position="115"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="398"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="398"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="429" mass="45707" checksum="3B525B1943723E47" modified="2011-01-11" version="1">MKQRKFNVLLLVFGLLGAVVGFILGELILHKLIGHWPHIIVVGLYFGIMALCIGLGCLIGELISPQLNGHSWRQRYSGLSWKLLVPATLVMLLVAGLLLELGYQVNPEGRKSVQDLVLVIDNSGSMQQTDPDNERLTAAKSLIGQMDGDKRVAIVSFESTAQLVQPFTPIGTDAEKQAVYSKIDSMQTIMSGGTEIGLALDETIKEIETQGNAEKGSLVIMLSDGFSELDTQTALAPYIARQIPINTIGLKLAESEGIALLQNIASLTGGTYSNVANAQGLTQAFGKIYNKIGDRTLVTERTGEYADSLYFAIYRVTALVIIGVLLGLALGLMFDNRFLARNFAIGGVPAGLLAGLILERGLSGSPIGDLMIRLLAALVLAALIAVFSLVLPIAENTRRSSGGGSQGGSSGQRRGAPEGPTRNRRSSGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHT5</accession>
    <name>E3EHT5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fecD5</name>
        <name evidence="8" type="ORF">PPSC2_11155</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56347.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599707.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23550"/>
    <dbReference type="EnsemblBacteria" id="ADO56347">
        <property type="protein sequence ID" value="ADO56347"/>
        <property type="gene ID" value="PPSC2_11155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2362"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_0_2_9"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="149"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="181"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="223"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="258"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="286"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="313"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="341"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56347.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="370" mass="39244" checksum="B5210F331432FDB2" modified="2015-05-27" version="2">MISRTSSDYSSKANSRADLAGKPPWRFTTILLLLTAGLVLSVTLAVMLGPVAVAPGTVWRIALSHLPWLDQWVPMTWTKPEQYIVWEIRFPRVLLGVVVGAGLAVTGAAIQALIRNSLADPYILGVSSGASVTATLVIVFGAFGFLGRLALPLSAFIGSLAAMLMVFALARVAGRISTTRLLLAGVAVSMMLSAVTSFIVTMAPNEKGIRDAMYWMMGSLAGAQWDTLFIPSLIITVGTAVLLTRYRSLNALLTGEEAAVTLGVNVQAFRVLLVVVASLLTGAVVSVSGSIGFVGLMIPHIVRLIVGSDHRRVLPVSLLLGAIFVVWADVCARLVLAPQELPIGIVTAVCGGPFFVWLLRRSSYSFGGEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI11</accession>
    <name>E3EI11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371204.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2631"/>
    <dbReference type="EnsemblBacteria" id="ADO56600">
        <property type="protein sequence ID" value="ADO56600"/>
        <property type="gene ID" value="PPSC2_12340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2618"/>
    <dbReference type="eggNOG" id="ENOG5032SU1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2219752_0_0_9"/>
    <dbReference type="OMA" id="VLHGFDT"/>
    <dbReference type="OrthoDB" id="1949819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="10556" checksum="FB7ACF012DD70ED3" modified="2011-01-11" version="1">MAKAYLQITLKINAPEREAATKVYTAYKEPFLSGISGAVSKELLVRDEDVQVLHGFTSEADAKAYLESDLFTNDVVVGLKDLLQAEPEIRIYSTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIF7</accession>
    <name>E3EIF7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ysiA</name>
        <name evidence="3" type="ORF">PPSC2_06200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369901.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19155"/>
    <dbReference type="EnsemblBacteria" id="ADO55270">
        <property type="protein sequence ID" value="ADO55270"/>
        <property type="gene ID" value="PPSC2_06200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1278"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_12_2_9"/>
    <dbReference type="OMA" id="NRAWQST"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013570">
        <property type="entry name" value="Tscrpt_reg_YsiA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08359">
        <property type="entry name" value="TetR_C_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="3"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="22589" checksum="5D7E893447A095F9" modified="2011-01-11" version="1">MKQQTKEIIFNGALKAFSERGFNETNMEEIAKVCGIAKGTLYYNFKNKQELYIYILKMGMERFVQDIHEAMAQIPMDQVEVRVHKLIQVHIEFIGREPDFCRLLVSKGWVSQEQHFNIRQVLADYFDFMEAEIDSGKFYGKISSKLDAKTTANCLFGIYIFTPMRSMVWGETMNPQEVRESIEVFVCNALGMQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ99</accession>
    <name>E3EJ99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">hlyD3</name>
        <name evidence="6" type="ORF">PPSC2_11355</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370991.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23715"/>
    <dbReference type="EnsemblBacteria" id="ADO56386">
        <property type="protein sequence ID" value="ADO56386"/>
        <property type="gene ID" value="PPSC2_11355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2402"/>
    <dbReference type="eggNOG" id="COG0845">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_14_2_9"/>
    <dbReference type="OMA" id="AYEDQKF"/>
    <dbReference type="OrthoDB" id="1432684at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="5">
        <location>
            <begin position="63"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="464"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="169"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="265"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="486" mass="52707" checksum="4CD45BF577BF66C1" modified="2011-01-11" version="1">MAETVLNDALIKLRKKRRKKWIWTAIVLLVVGGGGAAVYLNMPKEQAAPVVQDETFKVERGDVSEKLDTSGTVQASKEVKLNFTSAGDNKLAAVNVKAGDKVKKGQVLALLDSSEIKMQIQSASDSLEISKAKLAELEKGPKAEDIEIQKTNVLRAKMAVDTAQESFELEEAESQKKASQKQLEQARKAYEDQKFLHDAGAVSNSELEQAEQALDKAQTDYDNLDLQFRKIISQKRRTISEAEIGYRAALAELRKTQVPADASSIQSSRIEVRRLATELEQKKNELNKLQVTAPWDGVILKVNGDVGTSPTAPFIVMNNSDSNDLKVVVKVSQNDIVKVKKGLSAVLTTNAYPGESFPGKVQFVSPEASTDEGMTTYLMELSVHDPKGKLKTGMIMNVAVILGVHKNVLFVPATALRSEGGQDGVYVSANNAANPGARTFKPVELGFYTPDRVELKSGVKEGDTIIVPAPEPPPDPSAMGGMQGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC1</accession>
    <name>E3EJC1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phospholipid phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pgpB3</name>
        <name evidence="3" type="ORF">PPSC2_11455</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371013.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23820"/>
    <dbReference type="EnsemblBacteria" id="ADO56408">
        <property type="protein sequence ID" value="ADO56408"/>
        <property type="gene ID" value="PPSC2_11455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2422"/>
    <dbReference type="eggNOG" id="COG0671">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072573_3_3_9"/>
    <dbReference type="OMA" id="WITKHAV"/>
    <dbReference type="OrthoDB" id="1928533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="189"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="2">
        <location>
            <begin position="93"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="223" mass="25044" checksum="6A9AC4CB82125CDA" modified="2011-01-11" version="1">MKQLPTKLPISVALLTCIVCALGFGLIALWVSDHQVRHFDHKIITAIGQLESPAMTRLMKCFTMIGSGIPVVIIILIAMFVLYSVLGHRRELFFLAVAVLGSVLLNMVLKMLFQRSRPEINRIIEANGYSFPSGHSMTAFSMYAALTFLLWKHVPSRRGRILLVVLSSLLILAIGTSRIYLGVHYPSDVVGGYFMSGCWMAACIWFYQRYEERILSLRTKSTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJI0</accession>
    <name>E3EJI0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yurN1</name>
        <name evidence="7" type="ORF">PPSC2_12035</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371134.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24360"/>
    <dbReference type="EnsemblBacteria" id="ADO56530">
        <property type="protein sequence ID" value="ADO56530"/>
        <property type="gene ID" value="PPSC2_12035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2546"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_0_9"/>
    <dbReference type="OMA" id="LARMWLL"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="216"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="261"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="68"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="32608" checksum="80795781542723C1" modified="2011-01-11" version="1">MNKYLGNKPALALFLLPALILYSVILIYPVLQTVLRSFYDWDGLSTLTFSGLNNYRELFSDPLLATSLKNGLIFAIVLAVFQIGLGTILALICADPRTRGRKILKTAYFIPVVLSVTVVCQLWIAIYDPTNGLINRLFDLLNIPYQQNWLSSPTTSIIAIAFVNAWQFMGYQFSLLYAGVKSIPEDYFEAATIDGCSKWKAHLHVTLPLMRETYKFCFIIAITSGIGAFVQMLIMTNGGPGTTNYTLTFMIYRYAFMESNYGYACAVSVLLVLISLLATVVINKLFDRGQTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJK9</accession>
    <name>E3EJK9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydfH1</name>
        <name evidence="5" type="ORF">PPSC2_12175</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371163.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24530"/>
    <dbReference type="EnsemblBacteria" id="ADO56559">
        <property type="protein sequence ID" value="ADO56559"/>
        <property type="gene ID" value="PPSC2_12175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2574"/>
    <dbReference type="eggNOG" id="COG1802">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_5_2_9"/>
    <dbReference type="OMA" id="AWDTVEN"/>
    <dbReference type="OrthoDB" id="1911275at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="217" mass="25944" checksum="845886DD5A933871" modified="2011-01-11" version="1">MFTKEEIKQLLKNDILSMILKPGTLLSETTLSERFQLSRTPLRDVLKQLALESYIDIYPKKGNVVSYIDLESVEQMSYLRSAVEKEIMKELSTQFALSDIQKLSEILDRQRAVIDEDHATDQFLILDDQFHQTMFQLVGREFLWQLIQQSNVHYIRYRKLHMLQAGKLMEIWHEHQTMLEYMLNQETSKMDDLVHHHLRKDIHSLEFLRQFADYIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJQ5</accession>
    <name>E3EJQ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386067.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0261"/>
    <dbReference type="EnsemblBacteria" id="ADO59653">
        <property type="protein sequence ID" value="ADO59653"/>
        <property type="gene ID" value="PPSC2_26875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5680"/>
    <dbReference type="eggNOG" id="COG2404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052014_0_0_9"/>
    <dbReference type="OMA" id="IDHHISA"/>
    <dbReference type="OrthoDB" id="1040743at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038763">
        <property type="entry name" value="DHH_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64182">
        <property type="entry name" value="SSF64182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="432" mass="50111" checksum="E88D0E7763823DCF" modified="2011-01-11" version="1">MDMTQVYSYCQAAKYVRKIQNCNKKEFEDRIRKAFGRINNIQISHEYLDDSMICCTCIVDSFCNDIYLCVDITKKDGKISVVRVSVSVNYCFYLDPKSFTKVVHVSHDDLDGRSPLILSRIAFSDKELITKACSYSRVDEIVKDMLNNELEKETTLMFITDISPSPEVLSRIHDMVQEGYRILLLDHHDAKPEVPVSEYKSWMKLDQTYPDGRGTAATGMYYDFLCANDLIKPTPILEDYIELVRLFDTWEWEEPENLRAKRLNDYFFMSHWEEFDKQVLLRLTSPEIIRETTAQYEAGVRTLFTFDENIEYMLDVEHKRIQGYCKKKKNQMKLLHGNVDSTDRMYKYGVVFAEKYQSEAGNFLCKEFMDEMDFVVLIDAGSKKMSLRRHKHKPVNVGAIALSLGGGGRPATAGCPLNEKTKHLFLDPLLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJQ6</accession>
    <name>E3EJQ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386068.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0262"/>
    <dbReference type="EnsemblBacteria" id="ADO59654">
        <property type="protein sequence ID" value="ADO59654"/>
        <property type="gene ID" value="PPSC2_26870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5679"/>
    <dbReference type="HOGENOM" id="CLU_1254936_0_0_9"/>
    <dbReference type="OrthoDB" id="1730305at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="25469" checksum="B4DE94137DBA0833" modified="2011-01-11" version="1">MVQFPDKCPACGGSFEKVHDTHNQCDTCELAMLNGVYVLENEHDRGYHEVRILNNKIYDPEKIAVSDREIVSFLDRWLVNAGALKYDASAIELVSKLIPHFSYEGSLFRGFYHPFVIIRRQQTVHCIESWSKSRCGIQNLENYAQIAFGNVNKEDGSVETYTPEQFIESNIDLQKEPFDHVIEEEFEGLDLVRLAHYVNYRSDFLQLLEDVEEVLVIQKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJS6</accession>
    <name>E3EJS6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386088.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59674">
        <property type="protein sequence ID" value="ADO59674"/>
        <property type="gene ID" value="PPSC2_26740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5652"/>
    <dbReference type="HOGENOM" id="CLU_2303143_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="12070" checksum="7DD45AB0746794BE" modified="2011-01-11" version="1">MNIYKLVCSLTDKFEISEWKWKLVEERNTYYKIDSGVTKIQLKKTDLNRVTQTLHMLDLEVQVFCTEELLETFRRDLPSIYKQEVRKMISLLQNKLEKLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK27</accession>
    <name>E3EK27_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386150.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0345"/>
    <dbReference type="EnsemblBacteria" id="ADO59736">
        <property type="protein sequence ID" value="ADO59736"/>
        <property type="gene ID" value="PPSC2_26490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5586"/>
    <dbReference type="HOGENOM" id="CLU_1260422_0_0_9"/>
    <dbReference type="OrthoDB" id="2093490at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="214" mass="24484" checksum="FB002B154FA129DD" modified="2011-01-11" version="1">MNINQVIESGEKIVLKEQHFLPLSAATEWSMIIGAVIFCLVLIICFGLFSGFRRIGLEGCLRLFMVAYIISFAFTYITFKQDYEKIQNKYVSEVEKWKKEQAYPYIKALPIEKLEIMKIETDSKAVSKTNIFKMFPDVNDNKLGRTPLTLSFKVGDEVFTITESLQTSMELSNEEKPYIEFQNLERDLGHGVNAGAYNAKVHLPKSFALTNINN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK40</accession>
    <name>E3EK40_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386163.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0358"/>
    <dbReference type="EnsemblBacteria" id="ADO59749">
        <property type="protein sequence ID" value="ADO59749"/>
        <property type="gene ID" value="PPSC2_26435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5573"/>
    <dbReference type="HOGENOM" id="CLU_2790077_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="7925" checksum="C2662EA63628AD01" modified="2011-01-11" version="1">MSNNKSINFEIVTSKKVSNGDTIDYKKRKMYITKIKSVEITPHGELLVTGLCKEDQVSRMLWKYSRNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK77</accession>
    <name>E3EK77_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386200.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0396"/>
    <dbReference type="EnsemblBacteria" id="ADO59786">
        <property type="protein sequence ID" value="ADO59786"/>
        <property type="gene ID" value="PPSC2_26230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5523"/>
    <dbReference type="HOGENOM" id="CLU_2106571_0_0_9"/>
    <dbReference type="OrthoDB" id="2208953at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="124" mass="14268" checksum="66142581AD024912" modified="2011-01-11" version="1">MLKIKKMTDQQLNNELSRMEMHRLGWKLVGDTGPWIKPDGSYSSGRYRDYCTELASLEIQREAINIDAEQYMRNLEKVAVHPAHHKGEDLISYEVAAWMANASPRERAEAAYTLFNTGLDVDHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKL0</accession>
    <name>E3EKL0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386256.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0453"/>
    <dbReference type="EnsemblBacteria" id="ADO59842">
        <property type="protein sequence ID" value="ADO59842"/>
        <property type="gene ID" value="PPSC2_25960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5460"/>
    <dbReference type="HOGENOM" id="CLU_2937332_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="6766" checksum="A861B08CC6EF58FB" modified="2011-01-11" version="1">MKMRHVVCWECEGRGWDAPIGASLLPEQETCHQCKGEKTMFCTEEFFQGEGNLQEVGTDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKP9</accession>
    <name>E3EKP9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27585</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385914.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59500">
        <property type="protein sequence ID" value="ADO59500"/>
        <property type="gene ID" value="PPSC2_27585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5843"/>
    <dbReference type="eggNOG" id="ENOG50308C9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_686676_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="401" mass="48103" checksum="5F61D870D13E7D87" modified="2011-01-11" version="1">MKHHRNLFDARSLHNDTRLLFKLKLLLGTVCAYGGEIPLTNAELAKRMGTSSYRISVLLQKLVCEEIVHYDVRGKLFFNQYVFIKENEDIGKDDLYAKNFVFFNSESFLQEDRNVQRLVLHYVGKELVYLPGNFRWGHIHDLYGPLGLLNIRTRKEALAVLKKAEKYLKMKIYKDNFQVLNVHQEWLDMGEVYSEGAELWVMKQLKKHRFCCDFLSRKAVWQIAKVMEDYYAKFDYEYATEIFDTALFQIQKNKMRSQNFFKLIYREDDEYIVSDEKNELDEISAYFRAVMESAELNYAVQLSFDLHEINRKKQMAESNLFSDDQITQKNQEIIEEANQQYEKVWDKLRQINRHWLDRFRQDPEWFIKHAYQIKFLPDPILEIKTEIEKALSKQNRKNWAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKU8</accession>
    <name>E3EKU8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0156"/>
    <dbReference type="EnsemblBacteria" id="ADO59549">
        <property type="protein sequence ID" value="ADO59549"/>
        <property type="gene ID" value="PPSC2_27350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5788"/>
    <dbReference type="HOGENOM" id="CLU_1509183_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="20351" checksum="07C16BA1C8D1C148" modified="2011-01-11" version="1">MVTKKGDVALEKGQLLSLPCITFDVSSHMITRKSLAIREYTGTNLDVGIPQGNGRFRLEKENQLIEEYLNAGKGIYLKGKVYFLESAYHSSIYYAKFKKVYDRIHENAERKMRTIAEDYLLHEVPQHQIPIITSIASLYDSGLFTMNKMLEKLSAYLEESKIACYLSLRSQDKDGEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKZ2</accession>
    <name>E3EKZ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386311.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0508"/>
    <dbReference type="EnsemblBacteria" id="ADO59897">
        <property type="protein sequence ID" value="ADO59897"/>
        <property type="gene ID" value="PPSC2_28675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6085"/>
    <dbReference type="eggNOG" id="ENOG502Z8U6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036711_1_0_9"/>
    <dbReference type="OrthoDB" id="763366at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017601">
        <property type="entry name" value="DGQHR-contain_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017642">
        <property type="entry name" value="DNA_S_mod_DndB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14072">
        <property type="entry name" value="DndB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03187">
        <property type="entry name" value="DGQHR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="380" mass="43632" checksum="0A0C800F2B3606B9" modified="2011-01-11" version="1">MNKTEERHNLEINNYATISGVRGKQFGREIFSSVILFKDLITFLSVFPEVQREVSERKINSIKKYVLSGLKDLRNNKKRKKIMRFFSSITVTARGNIFYNEEDQRLAIDTKNSKLSINDGQHRFYGINEAIGELNAMYNRAEDENGRNTILADLDELKNMIIPIVIFNGIDETEEKQLFHDLNNLAQRPSRSATIRLAQTDLYSKLSRELAEKNKYLSSFGVEMDKMSIHRKNKNFILLTTIYFIVHELIDTGKETFCEDTYNFYREGIDQVFDRIFESLPEDVNVKGKYLLERSYAFKGIVKFIVAAQKEGIKDDVIYEAIKETDWTNNITTWSPYGATEGNSGILFAAGEGGAKAIYKSLSDKVNLPTVSPKMGRPRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL45</accession>
    <name>E3EL45_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59607.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0214"/>
    <dbReference type="EnsemblBacteria" id="ADO59607">
        <property type="protein sequence ID" value="ADO59607"/>
        <property type="gene ID" value="PPSC2_27105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5732"/>
    <dbReference type="eggNOG" id="COG0596">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_50_6_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="19"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59607.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="269" mass="31730" checksum="769CA69D5404FBD2" modified="2015-05-27" version="2">MLKILLHHKVIAHSKSREWMILIHGIGGSSSIWFKQIRDLRKVFNLILIDLPGHGGNEQGICDDDDRSLFRIARQVLRVLDHRQIHAAHFVGISLGTIIIQAVQELSPERVKTMILGGAVERIYKPLLTFLKLMEWIKFLVPYMWLYRMAAYLLMPRKRHAEARRVFIQEAVQLGQKEFFCWYNLLCRELNPFFERKRIYDETPTLYIMGGEDFMFLPTIKTHFYHLKNSQLYIIHKCGHVCNIEREKVFNHRCIGFIRSNGMYSSKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELE3</accession>
    <name>E3ELE3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386389.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0586"/>
    <dbReference type="EnsemblBacteria" id="ADO59975">
        <property type="protein sequence ID" value="ADO59975"/>
        <property type="gene ID" value="PPSC2_28305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6002"/>
    <dbReference type="HOGENOM" id="CLU_1968398_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="14826" checksum="FEFBD6565BCE58F1" modified="2011-01-11" version="1">MDHIVVKEHIIHHIHKCGWLSYTQLLRVLAAEGIQVNGFYELKWSAKNLILWEGLSSTVFKALSDLLQEGILEAYPAPMELYRIDEIQLNRPIIFKIPKRKLRHPAMYLTYLRYNPKPTPKVLSFVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-09-29" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCU1</accession>
    <name>A0A0D5ZCU1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 12">Anaerobic ribonucleoside-triphosphate reductase-activating protein</fullName>
            <ecNumber evidence="12">1.97.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_28080</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="14 15">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
            <plasmid evidence="14 15">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 12">Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>glycyl-[protein] + reduced [flavodoxin] + S-adenosyl-L-methionine = 5'-deoxyadenosine + glycin-2-yl radical-[protein] + H(+) + L-methionine + semiquinone [flavodoxin]</text>
            <dbReference type="Rhea" id="RHEA:61976"/>
            <dbReference type="Rhea" id="RHEA-COMP:10622"/>
            <dbReference type="Rhea" id="RHEA-COMP:14480"/>
            <dbReference type="Rhea" id="RHEA-COMP:15993"/>
            <dbReference type="Rhea" id="RHEA-COMP:15994"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:29947"/>
            <dbReference type="ChEBI" id="CHEBI:32722"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:140311"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the organic radical-activating enzymes family.</text>
    </comment>
    <dbReference type="EC" id="1.97.1.-" evidence="12"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886258.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0631"/>
    <dbReference type="EnsemblBacteria" id="AKA44389">
        <property type="protein sequence ID" value="AKA44389"/>
        <property type="gene ID" value="PPSC2_28080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5953"/>
    <dbReference type="eggNOG" id="COG0602">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089926_0_0_9"/>
    <dbReference type="OrthoDB" id="1141206at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043365">
        <property type="term" value="F:[formate-C-acetyltransferase]-activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012837">
        <property type="entry name" value="NrdG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034457">
        <property type="entry name" value="Organic_radical-activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001989">
        <property type="entry name" value="Radical_activat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352">
        <property type="entry name" value="PTHR30352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352:SF2">
        <property type="entry name" value="PTHR30352:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000368">
        <property type="entry name" value="NrdG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00299">
        <property type="entry name" value="anaerobic_ribonucleoside-triph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02491">
        <property type="entry name" value="NrdG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01087">
        <property type="entry name" value="RADICAL_ACTIVATING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-0614">Plasmid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="13">
        <location>
            <begin position="12"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00014281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR000368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="AKA44389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17918" checksum="28C743FBB40A2055" modified="2015-05-27" version="1">MRVINIIKDSVVDGPGLRTTIFFAGCPHHCLGCHNPKSWSVCAGIEMSTNEVAEHVLQNPINHVTFSGGEPFSQNEKELIYLAKELKNKGRNIWCYTGYVFEDVVNKEVLKYIDVLVDGKFELEKRNLSLNYKGSENQRIIDVQKSLQSGDLVLYELE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCV2</accession>
    <name>A0A0D5ZCV2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44399">
        <property type="protein sequence ID" value="AKA44399"/>
        <property type="gene ID" value="PPSC2_28445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6034"/>
    <dbReference type="HOGENOM" id="CLU_2524442_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9725" checksum="9ECD019409EA849C" modified="2015-05-27" version="1">MSDGLLFFVAFQEVSLLKQEYNNNNLYKNSVTKSKRDVKICIEKGFILPLTMLYILYLKKVKINRREIVSGVWVVSIVSISYSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4A2</accession>
    <name>E3E4A2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydrodipicolinate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dapA7</name>
        <name evidence="2" type="ORF">PPSC2_12550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DapA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371246.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2673"/>
    <dbReference type="EnsemblBacteria" id="ADO56642">
        <property type="protein sequence ID" value="ADO56642"/>
        <property type="gene ID" value="PPSC2_12550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2664"/>
    <dbReference type="eggNOG" id="COG0329">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049343_1_0_9"/>
    <dbReference type="OMA" id="MVGNVYP"/>
    <dbReference type="OrthoDB" id="1438588at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002220">
        <property type="entry name" value="DapA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12128">
        <property type="entry name" value="PTHR12128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00701">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001365">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00146">
        <property type="entry name" value="DHPICSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01130">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR001365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="265" mass="29939" checksum="F95E79813FC1F22A" modified="2011-01-11" version="1">MKNFNVAIPTPFRDDESLYLEGFNPIVKHLTDNGIDSLLVSATTGEQNSMSIEERIHIIDYFNQQKFVNVELMFGVSATTTRNAIKLVKKLEESVFDSILIQFPPYIQPTQQQAISYINELLQHTTKNVVLYNNPFRTGFELSAESLKTVINQKYSNLVGLKEESDAKRHHNTDLPDDFIMFAGGDVNLIEKIMNGCNGLSSMVGNVYPQEIKQIFNDLLMNKPVDLWKIKQLINKVTSGQAIINIKNHYNSLGIKVGACRSPIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4A3</accession>
    <name>E3E4A3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lysR2</name>
        <name evidence="3" type="ORF">PPSC2_12560</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371247.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56643">
        <property type="protein sequence ID" value="ADO56643"/>
        <property type="gene ID" value="PPSC2_12560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2666"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="LPAPYCR"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="304" mass="34825" checksum="A67E26F4ED89E1BC" modified="2011-01-11" version="1">MELRQLEYFYAVCQELHFTRAAEKVGISQPSLSQQIRLLEHEIGTLLFDRMGKKTALTESGELLLKYTRNIFHELEQAKTSIDELNGLQRGTISIGTLLTVENYLIPPTLRSFHHLYPGVKISVFGLRTGDIKKQLLENKLDIGIVFLPMKGDELETISLYREEMAFAVPVGHPLENQDKLGIEVLQTTPSILLPEQYFIRQLINKACKDVGFIPEPVFEITTMQSLINMVIDRIGVTILPRPYLEYLNHPRIRIIPILNVNLARYIGIIYRKDKYLSAATRIFINTLKEASLHLTQNFMKGTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Q1</accession>
    <name>E3E4Q1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA replication protein DnaD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dnaD</name>
        <name evidence="2" type="ORF">PPSC2_14365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371628.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02025"/>
    <dbReference type="EnsemblBacteria" id="ADO57029">
        <property type="protein sequence ID" value="ADO57029"/>
        <property type="gene ID" value="PPSC2_14365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3066"/>
    <dbReference type="eggNOG" id="COG3935">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_091656_0_1_9"/>
    <dbReference type="OMA" id="FHYKDIF"/>
    <dbReference type="OrthoDB" id="1996763at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.630">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034829">
        <property type="entry name" value="DnaD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006343">
        <property type="entry name" value="DnaD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07261">
        <property type="entry name" value="DnaB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158499">
        <property type="entry name" value="SSF158499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01446">
        <property type="entry name" value="DnaD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DnaB_2" evidence="1">
        <location>
            <begin position="160"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="28110" checksum="35AEC7BC1C564999" modified="2011-01-11" version="1">MTGSFDKTSAAEWAEGVAYAMETGMVQIPYALLKHYRTLRLTDGEMLLLMQLLAFKQAERNEFPTWEQLQARIGCTANEIALYFSKLMKEGFLRIDSVEDRSSSVQFERYNLAGLYRKLAECMIAERSEQRDEDDILFAGKPDLLNGLSESPITEERNLFTIFEKEFGRPLSPMEYETISSWVDQDRYPEELILLALKEAVFAGKVHFRYIDRILLEWSRNRVRNAQDAKEYAQRFRGGGRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Q9</accession>
    <name>E3E4Q9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF5590 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_14405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371636.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02055"/>
    <dbReference type="EnsemblBacteria" id="ADO57037">
        <property type="protein sequence ID" value="ADO57037"/>
        <property type="gene ID" value="PPSC2_14405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3075"/>
    <dbReference type="eggNOG" id="COG5353">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114070_2_0_9"/>
    <dbReference type="OMA" id="NENIMVW"/>
    <dbReference type="OrthoDB" id="1655713at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046350">
        <property type="entry name" value="Cystatin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041401">
        <property type="entry name" value="DUF5590"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17881">
        <property type="entry name" value="DUF5590"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54403">
        <property type="entry name" value="SSF54403"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="DUF5590" evidence="2">
        <location>
            <begin position="40"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="174" mass="19963" checksum="AE4399CDBD859F22" modified="2011-01-11" version="1">MKNKKKWIAVAILAVILILVSIFWYYSYVTQDQVAEKNAAIIKAKQSGGLVSTTQTWKSVWDQIYWVVQGKNAQNENIMVWVPFQKMEGQPNIPVADPSGVHTELMKNGVDEQKMTAIIQQQLPNAKIVRLQPSVFNGEYVWQLFYDDESHHNYTFYRFSDGASTGIKYTLPNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4V0</accession>
    <name>E3E4V0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Heptaprenyl diphosphate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hepT</name>
        <name evidence="3" type="ORF">PPSC2_14605</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371675.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02255"/>
    <dbReference type="EnsemblBacteria" id="ADO57078">
        <property type="protein sequence ID" value="ADO57078"/>
        <property type="gene ID" value="PPSC2_14605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3116"/>
    <dbReference type="eggNOG" id="COG0142">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014015_2_0_9"/>
    <dbReference type="OMA" id="GKQMRPM"/>
    <dbReference type="OrthoDB" id="1861068at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00723">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00444">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="36679" checksum="FFC05025332F7348" modified="2011-01-11" version="1">MKRLDLFGLLKKDMNFIEEELYRSIDSREPLINDTSLHLLKAGGKRLRPVFVLLGGKFGEYDLDKLKRIAVPLELIHSASLVHDDVIDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARALSIAAGLPNPDIHRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAAGARERVNSLLYTYGYNVGMAFQIQDDLLDLCGTEKKIGKPPGSDMRQGNITLPVIYALEQPELRDDLLAEIWRIQDGDGQGDTRKAVDMIKKSEGITKAEILADRYINKALNALDLLPDVKTKKTLRDIAHFVTRRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E514</accession>
    <name>E3E514_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xylose isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yfiH</name>
        <name evidence="2" type="ORF">PPSC2_15270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371812.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02890"/>
    <dbReference type="EnsemblBacteria" id="ADO57222">
        <property type="protein sequence ID" value="ADO57222"/>
        <property type="gene ID" value="PPSC2_15270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3261"/>
    <dbReference type="eggNOG" id="COG1082">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061796_1_0_9"/>
    <dbReference type="OMA" id="NLDPSHM"/>
    <dbReference type="OrthoDB" id="1169054at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="20"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="36174" checksum="55F92017E1B8316D" modified="2011-01-11" version="1">MKLGVFMVLFGGRSLEEALDYVASQGLDAVEIGTGGNPGDKHCKPDELLENDTALKNFKKAVESRGLTISALSCHGNPLHPQKHLAQADHDTFLKTVRLAEKLEVPVVNTFSGCPGDHEDAKYPNWPVAPWPNDFQEVLKWQWENKIIPYWTETGKFAADHHVKIGLELHGGFSVHTPATLLRLREAAGEVIGANLDPSHMWWQGIDPVQAVQILGREGAIHHFHAKDTTIDPINVNKYGLTDMQEYTNMLDRAWQFRTVGYGHDVKTWADIISALRLVGYDYVVSIEHEDGLMSVEEGFTKAVHNLRQVLIEEPLSEMWWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5B1</accession>
    <name>E3E5B1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">int7</name>
        <name evidence="6" type="ORF">PPSC2_16450</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372057.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3515"/>
    <dbReference type="EnsemblBacteria" id="ADO57471">
        <property type="protein sequence ID" value="ADO57471"/>
        <property type="gene ID" value="PPSC2_16450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3512"/>
    <dbReference type="eggNOG" id="COG0582">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027562_17_1_9"/>
    <dbReference type="OMA" id="MARDKVK"/>
    <dbReference type="OrthoDB" id="785253at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028259">
        <property type="entry name" value="AP2-like_int_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14657">
        <property type="entry name" value="Arm-DNA-bind_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14659">
        <property type="entry name" value="Phage_int_SAM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="5">
        <location>
            <begin position="63"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="4">
        <location>
            <begin position="171"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="369" mass="43145" checksum="F05A1D4C1453CFFC" modified="2011-01-11" version="1">MKGHVYQRGKTWTYIIDLPSDPLTGGRRQKTKGGFKSEKEAWKACHLKIAEIEKGTYTDDSKITITEFLLEYLETHAKPNFKPTSFDTEKTIIEARIIPVLGKIRLQSLTPRIIKTFYADLRKSYSKEYVKNIHGVLKRALRLAYTESGLLSEDIMSKVSMRNKVNANEQKEMQFWTIEEFTQFLDSSRDHVHFIVFSLAVYTGMRRGEILGLRWSDIDFEQKELRVIQTANWTRNGLVIQRPKTNDSIRRVKLFQLIIDDLRLRQEQIKEHKKQYGETYEDNDLVCCYPWGGYIKPKRITEGMDVLVRKAGVKKIRFHDLRHTHASFLLRIGINPKVAAERLGMTPAMFNERYSHLLPTMQDEAVDRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5B3</accession>
    <name>E3E5B3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">NUDIX hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mutT5</name>
        <name evidence="4" type="ORF">PPSC2_16460</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the Nudix hydrolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372059.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3517"/>
    <dbReference type="EnsemblBacteria" id="ADO57473">
        <property type="protein sequence ID" value="ADO57473"/>
        <property type="gene ID" value="PPSC2_16460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3514"/>
    <dbReference type="eggNOG" id="COG1051">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037162_19_3_9"/>
    <dbReference type="OMA" id="KLEYQFP"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="15069" checksum="F044D958C989B52E" modified="2011-01-11" version="1">MKLVTAAIIHNDGEFLITRRGPDNKHAGKWEFPGGKLEIDETLEECVKREIKEELGIDIEVGQQFGESVYSYGHGSIKLIVFWATWVSGEIQLIDHDQLRWVNKETILQYDFLPADLPFVTQLSKDDKPRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5G0</accession>
    <name>E3E5G0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_17415</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BMP lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57679.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324583.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04755"/>
    <dbReference type="EnsemblBacteria" id="ADO57679">
        <property type="protein sequence ID" value="ADO57679"/>
        <property type="gene ID" value="PPSC2_17415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3720"/>
    <dbReference type="eggNOG" id="COG1744">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038813_0_0_9"/>
    <dbReference type="OrthoDB" id="603910at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Bmp" evidence="3">
        <location>
            <begin position="42"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57679.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="36297" checksum="771EB6594B34AF96" modified="2015-05-27" version="2">MKKRALLLTFRWIPIVTIFALLLSACGQSDVQTKAEPIKVGIVLSDIGLGDQSYSDAAFRGLVKARDEGKIVFEYREITETKTYDAAFNQLVQEKADLIIGLGYMVKDSLEAVAKKNPDRKFLIVDETSELPNVASITFKAEEGSFMAGVVAGLTSRTEQVGFLGGAESPLLKKFEIGYRAGVQSVKPNAKVTATYAGDFGKPELGTKIADDMINQNQIDVIFAAAGLTGVGALQEAQKQHKFAIGVDSDQFFIAEKAVVTSMIKNVDTAIYTVVKGFADHQRKFTEKDMVFGLAEEGIGLAPIRVVTLNPDQQKVMDDLMEKIKSGTLTVPTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5J0</accession>
    <name>E3E5J0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372290.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3755"/>
    <dbReference type="EnsemblBacteria" id="ADO57709">
        <property type="protein sequence ID" value="ADO57709"/>
        <property type="gene ID" value="PPSC2_17555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3751"/>
    <dbReference type="eggNOG" id="ENOG502ZQIX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114935_0_0_9"/>
    <dbReference type="OMA" id="RYPEEDH"/>
    <dbReference type="OrthoDB" id="1020087at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="24846" checksum="693344884C3AEC33" modified="2011-01-11" version="1">MSELTSGSLSLLKYKEAILEHDPVYAEDLNDKWFVFITKDTEESEEIPESLFQISGKIPVLYFYNFEDHCWGYRVVYNLQEIASLHISYVLLDTSIIKLAEERYPEEDHIEFLYVDPRGDKIRIELIEEVLRSNEYNEKIAKQFTNCNLKTFRFFELDNEQIKQLDDILNNNYYTQLESEHQLVEEFKELLNIEEMSWIRADRMNED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5K4</accession>
    <name>E3E5K4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sdr5</name>
        <name evidence="2" type="ORF">PPSC2_17620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372304.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04955"/>
    <dbReference type="EnsemblBacteria" id="ADO57723">
        <property type="protein sequence ID" value="ADO57723"/>
        <property type="gene ID" value="PPSC2_17620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3766"/>
    <dbReference type="eggNOG" id="COG3967">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_2_6_9"/>
    <dbReference type="OMA" id="HDHQGTT"/>
    <dbReference type="OrthoDB" id="1261526at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="26905" checksum="486F54948D0D6089" modified="2011-01-11" version="1">MKLTGNTIFITGGGSGIGRALAEALHNLGNKVIISGRRKERLEETIKANPGMSAVELNVQDPASIKATAKQLIEKYPDVNVLINNAGIIQSDDAAGVIDEDVLISTVTTNLLGPIRLTSAFIEHLKAKEEAVVINTTSILGFVPLATTAVYSATKAALHTYTLSQRYMLKDTSVKVIEIVPPWVQSNNDEPRAMPLDSFIDATIKILGTDTDEVLVEEAKMFRNNPGPNEGVFVTQLNDTMNSEPPKIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5L1</accession>
    <name>E3E5L1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Iron(III) dicitrate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_17650</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372311.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04975"/>
    <dbReference type="EnsemblBacteria" id="ADO57730">
        <property type="protein sequence ID" value="ADO57730"/>
        <property type="gene ID" value="PPSC2_17650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3774"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_0_1_9"/>
    <dbReference type="OMA" id="DESFMFI"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168632" evidence="3">
        <location>
            <begin position="42"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="4">
        <location>
            <begin position="87"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="45"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="193"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="346" mass="37618" checksum="9F49905555FEEA73" modified="2011-01-11" version="1">MNKGTKRRAAGSMAHADHKSRFLMGWMLALVLVLTACGAGAGTNGGNESATTPTDTPSNEAPQTAGAFPVTISHKKGEYTLNEKPKKIAVLDVKFLDQLLAIGEQPAGSVIAEGNTTFPEYLGDKPGDVQVLGTRDKPNLEAIVALDPDLILMTDFQEKEYERVSKIAPTIVLDFYEDWRDTLDTVAAITGKQAEAETVRKAYEDKIAGLKEKLSEKLGKETVALIRPRKEGIRVHGLEHRTGGILYEDLGLKMPALVQKIKDDTSVEISMEKVPEIGADHYFVLSDELFAAEAEALDSSSVWKSLDAVKNNRAYDVNSTLWIAYYGPLAINIIVDQASEALLGSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E602</accession>
    <name>E3E602_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lipA1</name>
        <name evidence="3" type="ORF">PPSC2_19985</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372793.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07205"/>
    <dbReference type="ESTHER" id="paeps-e3e602">
        <property type="family name" value="BlEst2-lipase-like"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58221">
        <property type="protein sequence ID" value="ADO58221"/>
        <property type="gene ID" value="PPSC2_19985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4258"/>
    <dbReference type="eggNOG" id="COG1075">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038340_0_0_9"/>
    <dbReference type="OMA" id="YQTATIN"/>
    <dbReference type="OrthoDB" id="929778at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012908">
        <property type="entry name" value="PGAP1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07819">
        <property type="entry name" value="PGAP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168571" evidence="2">
        <location>
            <begin position="25"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="526" mass="56852" checksum="C5C21DB91BCC3B7A" modified="2011-01-11" version="1">MKKLTVLMLIFLLSVTLIPAGAFAGSTTPEAPKAPAGSWTEGPPPNRVDPTKPALLFVHGLNSSAEVWTKNNNDMLQQARDAGYQTATINLYDANGTSQDMWDNGKLLADKIKVISNHFGKKLIIIAHSKGGVDTQTALVYNGAAPYVQRVITLSSPHHGSQLADLAYSSWAGWLADIVGSQNPGTSTLQTSYMKYFRTKTDALSNATTIPFFTFAGDNWSGGTASYILGGMYLSSFGKNDGVVTVDNAKLPGGRVVKIGSWDHAKVRTGSYVFSLILPYLQANTPALNQETEAFSAASSLTASAVQSTYNEIDNSYFIRGGDYNGKASETLTVENGVQSIDLDWISDKRVSQLELTKPDGTSELLNVKAGRDEEIFAGAWHHSAVVTNPQPGIYKLNAVIPDHGAYLLIARYHAAQVPELKYNLNAVGPRLNLKSQDSPTSVTQVTYQVQYYGDPQQGMTTAFKGLTLQQKTVTPTGQIELSKADKPGIYSVTYEINGTTAAGYPYRRTAVQSIYIDADGNKYVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D7</accession>
    <name>E3E6D7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protease regulatory membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372583.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06105"/>
    <dbReference type="EnsemblBacteria" id="ADO58006">
        <property type="protein sequence ID" value="ADO58006"/>
        <property type="gene ID" value="PPSC2_18895"/>
    </dbReference>
    <dbReference type="GeneID" id="66576287"/>
    <dbReference type="KEGG" id="ppm:PPSC2_18895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4050"/>
    <dbReference type="eggNOG" id="COG1585">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107496_0_0_9"/>
    <dbReference type="OMA" id="AGNTIHT"/>
    <dbReference type="OrthoDB" id="1773755at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="18153" checksum="F9D384C7661C2796" modified="2011-01-11" version="1">METLFWWLLAGGAIFTVVSVLIGDVLGSWLDGALELPGLDWFRPVVLLGAMTAFGGAGVLLTKYTGLTMGWVVVLALGIALVIGVLVFFAFIKPMANSEVSSGFSMRELTGRIGEVTIPVPEVGYGEVMIRLGAGNTIHTASSFDHKPLAAGTRIVVVEVAEGVVRVAYLDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6K1</accession>
    <name>E3E6K1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Restriction endonuclease S subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372833.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07410"/>
    <dbReference type="EnsemblBacteria" id="ADO58261">
        <property type="protein sequence ID" value="ADO58261"/>
        <property type="gene ID" value="PPSC2_20160"/>
    </dbReference>
    <dbReference type="GeneID" id="66576026"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4295"/>
    <dbReference type="eggNOG" id="ENOG50335NN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2118637_0_0_9"/>
    <dbReference type="OMA" id="EIHEQMV"/>
    <dbReference type="OrthoDB" id="1920228at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="12247" checksum="72788EEFB317A514" modified="2011-01-11" version="1">MSREKAMIHMLDAASKMQRNVSMILEAKAVEAEKMRNWTLNHLAPHAFDTDEEQLGRPLEIHEQMVEMLEGLTRLQTGLCSNLKALLDQDEQQGGGMEGMMGGMGSGDMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6P4</accession>
    <name>E3E6P4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ATP synthase subunit J</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ktrB3</name>
        <name evidence="10" type="ORF">PPSC2_20340</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372876.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07595"/>
    <dbReference type="EnsemblBacteria" id="ADO58304">
        <property type="protein sequence ID" value="ADO58304"/>
        <property type="gene ID" value="PPSC2_20340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4337"/>
    <dbReference type="eggNOG" id="COG0168">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026429_0_1_9"/>
    <dbReference type="OMA" id="QATQFFI"/>
    <dbReference type="OrthoDB" id="756220at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015379">
        <property type="term" value="F:potassium:chloride symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003445">
        <property type="entry name" value="Cat_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004772">
        <property type="entry name" value="TrkH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02386">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00933">
        <property type="entry name" value="2a38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0630">Potassium</keyword>
    <keyword evidence="4" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="75"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="131"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="193"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="230"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="295"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="348"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="377"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="407"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="446" mass="48539" checksum="F8B29C29C0234465" modified="2011-01-11" version="1">MNPNARWLRLSPPQIFVAGFAIIILIGSLLLMLPISNTTGKPLAFIDALFTAASATCVTGLVVKDTGLFFTTFGQIVIVALIQIGGLGFMTMATLIALVFKRRISLRERLILQEAMNQTSVEGIVGLIRKVLWYSLMIEGVCAAIFSIRWSFDMPVGRAIYFGIWHAISMFNNAGFDLFGEFRSLTGYVYDPIVNFTAMFLIISGGIGFVVMSDLADYRKRKRLSLHTKVVLSMTAALIVVGTLVIFVFEFTNPKTLGSLDWGGKLLGSLFQSVTPRTAGANTLDIAGLRQATQFFIIILMFIGASPGSTGGGIKTTTFALLIGAVFSMLRGREDIVLFRYRLAQARIYKALTITLLGLLFVIGVTMILSATEDHHFLMILFETVSAFGTVGLSMGLTPDLSVVGKLVITLTMFAGRLGPLTLAYALGPKKGKELYRHPEGKIIIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6V4</accession>
    <name>E3E6V4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Virulence factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypgR</name>
        <name evidence="2" type="ORF">PPSC2_21375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58506.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324726.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08600"/>
    <dbReference type="EnsemblBacteria" id="ADO58506">
        <property type="protein sequence ID" value="ADO58506"/>
        <property type="gene ID" value="PPSC2_21375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4544"/>
    <dbReference type="eggNOG" id="COG1413">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_733295_0_0_9"/>
    <dbReference type="OrthoDB" id="1064510at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014824">
        <property type="entry name" value="Nfu/NifU_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036498">
        <property type="entry name" value="Nfu/NifU_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004155">
        <property type="entry name" value="PBS_lyase_HEAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025989">
        <property type="entry name" value="Virulence_F_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08712">
        <property type="entry name" value="Nfu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13769">
        <property type="entry name" value="Virulence_fact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00567">
        <property type="entry name" value="EZ_HEAT"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00932">
        <property type="entry name" value="Nfu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110836">
        <property type="entry name" value="SSF110836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nfu_N" evidence="1">
        <location>
            <begin position="4"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58506.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="377" mass="42608" checksum="166F612C65D980E6" modified="2015-05-27" version="2">MKITSIEPTPSPNTMMLHLDERLEAGIRRTYTRDNERSAPPFIRRMLAIEGVKSVFHTTDFVALDRKGNADWSTILGQVRDQLGEEGADANWDLPEETSGEAFGEAQVFVQFFRGLPMQIRVKAGQQEERISLSDRFVQAVTRVASATLIKERKLSDYGVRYGELPDIAREVEQELEAAFPQDRLEQIIQQAIAHGADNSEFVEERREWSDAELKQALQHEDWRTRYAALDRLEPTPEHLPLIRQALHDDKMQLRRLGVVYLGDIRSPEAMELLFEALRDPSAAVRRTAGDTLSDIGDPVATSAMIGALSDSSKLVRWRAARFLYEVGTEDARDALEKAVDDPEFEVSLQAKMALERIESGEQAAGTVWQQMAKRNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E719</accession>
    <name>E3E719_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rpsJ</name>
        <name evidence="6" type="ORF">PPSC2_22440</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in the binding of tRNA to the ribosomes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS10 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09905"/>
    <dbReference type="EnsemblBacteria" id="ADO58721">
        <property type="protein sequence ID" value="ADO58721"/>
        <property type="gene ID" value="PPSC2_22440"/>
    </dbReference>
    <dbReference type="GeneID" id="66575579"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4757"/>
    <dbReference type="eggNOG" id="COG0051">
        <property type="taxonomic scope" value="Bacteria"/>
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    <dbReference type="HOGENOM" id="CLU_122625_1_3_9"/>
    <dbReference type="OMA" id="QFEIRVH"/>
    <dbReference type="OrthoDB" id="2012682at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00508">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001848">
        <property type="entry name" value="Ribosomal_S10"/>
    </dbReference>
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        <property type="entry name" value="Ribosomal_S10_CS"/>
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        <property type="entry name" value="Ribosomal_S10_dom"/>
    </dbReference>
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        <property type="entry name" value="Ribosomal_S10_dom_sf"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="rpsJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RIBOSOMAL_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
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    <feature type="domain" description="Ribosomal_S10" evidence="5">
        <location>
            <begin position="7"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="11641" checksum="B65AFA6673821D63" modified="2011-01-11" version="1">MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGAGVSGPIPLPTEKQIITILRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDALMRLDLPSGVDIEIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E768</accession>
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    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58923.1"/>
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    </dbReference>
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        <property type="protein sequence ID" value="ADO58923"/>
        <property type="gene ID" value="PPSC2_23380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4950"/>
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        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="1596937at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
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        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
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        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
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        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
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    <feature type="domain" description="Cyclic nucleotide-binding" evidence="3">
        <location>
            <begin position="15"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="4">
        <location>
            <begin position="149"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="27055" checksum="66B658FF60743172" modified="2011-01-11" version="1">MREIQDQEQLKYFLHLHQLESILYEPLHPYLSLYRLEQGEKLCLQGDAIEHLYILVQGKVKIFTSSTEGKTLILCFKTPIEVIGDVEYIRNSHVINTVEAVSPIYVIGVHHQWMNKYGRDYAPLLQFLLDIVTRKFCLDSDFSSFNLMYPVEVRLASYLLSVSFDESNSAFHEELRASSLVDVANLIGTSYRHLNRVIRKMIEEGLVERAKGYIVIKDRKGLSELAGHNIYESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E793</accession>
    <name>E3E793_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Iron-dicitrate transporter ATP-binding subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fhuC5</name>
        <name evidence="6" type="ORF">PPSC2_23495</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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        <property type="protein sequence ID" value="ADO58948"/>
        <property type="gene ID" value="PPSC2_23495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23495"/>
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    <dbReference type="eggNOG" id="COG1120">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
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    <dbReference type="OrthoDB" id="1048863at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="277"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="280"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="32539" checksum="BED8B3759FEC1A50" modified="2011-01-11" version="1">MFRLKTANLDIAYEDRLIVEDLNVEIPQGKITALVGANGSGKSTILKTMARIMNPKGGSVLLDGKSIHKQSTREVAKQLAILPQNPTAPEGLTVTELVSYGRFPYQKGFGSMKAEDRKMVEWAIQVTGMSEFHDRPIDQLSGGQRQRAWIAMALAQDTDILFLDEPTTFLDMAHQLEVLHLLEYLNTSAERTIVMVVHDLNHAARYAQHMIAIKKGKAKAVGAPTEVMTPDVLREVFGIEADIVTDPRTGVPLCLPYALAGQPAVSQAVKGMNVEEKQTVGSVAERRDARPQVAARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7F2</accession>
    <name>E3E7F2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADPH dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqjM5</name>
        <name evidence="2" type="ORF">PPSC2_24490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59163.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886071.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5226"/>
    <dbReference type="EnsemblBacteria" id="ADO59163">
        <property type="protein sequence ID" value="ADO59163"/>
        <property type="gene ID" value="PPSC2_24490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5188"/>
    <dbReference type="eggNOG" id="COG1902">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012153_2_1_9"/>
    <dbReference type="OrthoDB" id="1033671at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003959">
        <property type="term" value="F:NADPH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02932">
        <property type="entry name" value="OYE_YqiM_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044152">
        <property type="entry name" value="YqjM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43303">
        <property type="entry name" value="PTHR43303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="7"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59163.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="345" mass="37612" checksum="9EB4E42A6B9DACD6" modified="2015-05-27" version="2">MNALNNSLFTPYTLKDLELKNRVVMAPMCQYSVTDKDGIPNDWHHVHYLSRAIGGTGLIIIEMTDVEPDGRITDYDLGLWSDEHIPAYKKLVDGIHAHGAKVGIQLAHAGRKAEDAAEPVAPSAIAYPDVNYKQPRALTTEEVRGMVQKFADAARRAVQAGVDTIELHGAHGYLIHQFHSPVTNKRDDEYGKDLSRFGVEVIQAVRKEMPAGMPLILRISAVEYVDGGYDVDHAIELSRAYQAAGVDVIHVSSGGEGPAGARKPGNYPGYQVPFARQIREALNIPVIAVGVLDDPALAQSVIGNEDADLVAVGRGLLRDPYWAIHAAVALRGEKPSVPEQYQRGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7L0</accession>
    <name>E3E7L0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56816.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599807.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01045"/>
    <dbReference type="EnsemblBacteria" id="ADO56816">
        <property type="protein sequence ID" value="ADO56816"/>
        <property type="gene ID" value="PPSC2_13355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2845"/>
    <dbReference type="eggNOG" id="COG5628">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112329_1_1_9"/>
    <dbReference type="OrthoDB" id="2055010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="28"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56816.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="20057" checksum="12FB83EE4D69404C" modified="2015-05-27" version="2">MGYNIKSELKLSIKSVPESQKDIIVQLMQFYLYDFTAYLRIDVTEKGTFPAYPDLYQYWTSDEQKLPFLIWRQDIPVGFALVDRMSSNREADYYMAEFFVLRPYRHNGVGTWAAHELFGRFNGRWKVTQMSTNRPAQSFWRKVIGSYTNGEYREQTHPVRGNISQFFNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7S1</accession>
    <name>E3E7S1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yecA</name>
        <name evidence="6" type="ORF">PPSC2_14000</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371554.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01655"/>
    <dbReference type="EnsemblBacteria" id="ADO56954">
        <property type="protein sequence ID" value="ADO56954"/>
        <property type="gene ID" value="PPSC2_14000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2990"/>
    <dbReference type="eggNOG" id="COG0531">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007946_18_0_9"/>
    <dbReference type="OMA" id="WWVGSRG"/>
    <dbReference type="OrthoDB" id="527053at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002293">
        <property type="entry name" value="AA/rel_permease1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13520">
        <property type="entry name" value="AA_permease_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="87"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="126"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="223"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="265"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="316"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="350"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="382"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="438" mass="46368" checksum="C04CF9AE773B24DB" modified="2011-01-11" version="1">MTNENKLQSTIGLPQAIALYIGAVLGSGVLIVPGLAAQMAGPASLLAWGFMTLLILPMALSMGLLSAKFPNAGGVSHFVTLAFSPRAGAYIGWFFLMSVPIGAPVAALTGAGYMTAAMGWGEESRIMLAAAMLAVGLVINWIGMKVAGRIQIAVVIAIVAVLIFAIAAALPQMKTVHFTPFVPHGWLSVGQAAAILFWCFIGWEAVSHMSEEFTNPERSAVRGVTIAAVIVGLLYFLTALATVGTQSYLAGGSDASLIWVISRAIGPWGAIIAGLTGIFICTATIIAYVGAASRVAYALSRQGQAFRWMGVLSQRFHTPIGGIAFLSVCFVIIMVLYSSGAVSLTNLIQLPNATFILTYLGGCAAGIKLLRGSRWGVSISWISFISTAVVFPFVGWAMLYPCLITVVLWITDRIRHKRTFTHPNSAVTEQEKATVRHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7X8</accession>
    <name>E3E7X8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alkaline phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">phoB3</name>
        <name evidence="4" type="ORF">PPSC2_14275</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the alkaline phosphatase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371610.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01930"/>
    <dbReference type="EnsemblBacteria" id="ADO57011">
        <property type="protein sequence ID" value="ADO57011"/>
        <property type="gene ID" value="PPSC2_14275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3047"/>
    <dbReference type="eggNOG" id="COG1785">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008539_6_2_9"/>
    <dbReference type="OMA" id="GYNTTPV"/>
    <dbReference type="OrthoDB" id="585847at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16012">
        <property type="entry name" value="ALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001952">
        <property type="entry name" value="Alkaline_phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11596">
        <property type="entry name" value="PTHR11596"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00245">
        <property type="entry name" value="Alk_phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00113">
        <property type="entry name" value="ALKPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00098">
        <property type="entry name" value="alkPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168250" evidence="2">
        <location>
            <begin position="32"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="3">
        <location>
            <begin position="465"/>
            <end position="533"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="538" mass="56964" checksum="1A29DD6EF4907689" modified="2011-01-11" version="1">MLKCWGIHTKKSVAALVATMMLTVSGGTAMAVEKDTSIKNVIILIPDGMANDATALARWYKGSSLTLDSMASGMVRTHSADAPIADSAPAGTAFATGHKSHTGYVGVLPDEATMPGQQPIAAGDAKKPVASILEASKLAGKSTGIIATSEIMHATPADFTAHYPDRKNYDALSMQQAYNGVDVVLGGGGKFLEPAGRKDGQDIIAQIKDQGYDFVTTPEGLKNSTSNKLWGSFSPEALAYNLDRDASKEPSLAEMTTKAIDVLSKNDKGFFLMVEGSKVDWAAHANDPTGIISDVLSFDDAVKVALDYAKQNQNTVVVAVTDHGNGGLTIGSSDTTSNYDKTPLASFIDPLKKAKLTGEGLEAKLNADRSNIKEVLSTYFGITDLTDEEVKTIKNAKEGSMNYAVGPMISKRANIGWTTGGHTGGDVVLYTYAPNGDRPSGVIDNTDVNKYMTRVLGLDLDTVSKQLFVPAKAAFEAKGAKFTADTKVITVTKGSNKLELPVYKNIATLNGKNSTLNGVVVFNGVDYFVPQQAIDLIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E851</accession>
    <name>E3E851_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371757.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3205"/>
    <dbReference type="EnsemblBacteria" id="ADO57164">
        <property type="protein sequence ID" value="ADO57164"/>
        <property type="gene ID" value="PPSC2_15000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3201"/>
    <dbReference type="eggNOG" id="ENOG5030WCB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_124833_0_0_9"/>
    <dbReference type="OMA" id="YITVESK"/>
    <dbReference type="OrthoDB" id="1165233at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="167" mass="19769" checksum="AD3EFE8B75308F11" modified="2011-01-11" version="1">MDNKTELKASDLRQLAIDKIIATPFLNDFKYLKSRKVLKKENKEFIFEICFGATKYSALKVYITVESKSIKKKYSTGACFHSELIALTKKYMGNRDYLVSTEAERERVIQEIMADIYIFALPFFKRFEQVETLAEQVHKSGFLPHRKRFDKFNPLTKRFIDFYYQGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-12-02" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E852</accession>
    <name>E3E852_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">insK4</name>
        <name evidence="2" type="ORF">PPSC2_15005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3206"/>
    <dbReference type="EnsemblBacteria" id="ADO57165">
        <property type="protein sequence ID" value="ADO57165"/>
        <property type="gene ID" value="PPSC2_15005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3202"/>
    <dbReference type="eggNOG" id="COG2801">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027402_4_3_9"/>
    <dbReference type="OMA" id="NREHEFH"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00665">
        <property type="entry name" value="rve"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13333">
        <property type="entry name" value="rve_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="126"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="34097" checksum="8D9827C557D52491" modified="2011-01-11" version="1">MTRKEARFEIIEGMRTRYSLKWLLELAHVSRAGYYKWRKTQQTTQQRKQEEELLESHMLSIHRIHPYFGYLRMTVALRREGILVNHKKVYRLMKKLGIRSVIRKKRRFFGKQASVVNANRLDRQFQADSPLSKLVTDITYIRAGERFVYLSVIQDLFNNEIVAWRLSERNDLALVSETLDVLSENVNMEGVILHSDQGFQYTSKPFNRKLKRLGMLGSHSRRGNCLDNACIESFFSHLKTEKIYLTKPGTLAEVEQHVREYISFYNENRFQKKLNNRSPIEYRETVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8C0</accession>
    <name>E3E8C0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rnaZ</name>
        <name evidence="2" type="ORF">PPSC2_15705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371898.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03355"/>
    <dbReference type="EnsemblBacteria" id="ADO57312">
        <property type="protein sequence ID" value="ADO57312"/>
        <property type="gene ID" value="PPSC2_15705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3353"/>
    <dbReference type="eggNOG" id="COG1234">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096503_1_0_9"/>
    <dbReference type="OMA" id="CPHPIRK"/>
    <dbReference type="OrthoDB" id="1712770at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="19"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="28268" checksum="1CF93A6C73BDAF7F" modified="2011-01-11" version="1">MGLTIQMLGTGSAFAKHYYNNNALLDSGEGKLLIDCGTTASLALHQMGVPLPDIDAILITHIHADHVGGLEEFGFQMNILHRRKPLLYIAEPLIHPLWEHTLKGGMSQQGMIDKLEDVFEVNVITPGVSTTLVPGIQVELIPTQHIPGKHSYSLFINDRLFYSADMVFDPDLLHHLVHERGCRSILHEVQLQGAGEVHTTLDELLSLPTPLQEQIHLMHYSDDMEQFRDKAGIMSFLEQQRVYPLADLERAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G6</accession>
    <name>E3E8G6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Adenosylhomocysteinase</fullName>
            <ecNumber evidence="4">3.3.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">S-adenosyl-L-homocysteine hydrolase</fullName>
            <shortName evidence="4">AdoHcyase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 8" type="primary">ahcY</name>
        <name evidence="8" type="ORF">PPSC2_16660</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 5">
            <text>H2O + S-adenosyl-L-homocysteine = adenosine + L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:21708"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
            <dbReference type="EC" id="3.3.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4 5">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
        <text evidence="4 5">Binds 1 NAD(+) per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 5">Amino-acid biosynthesis; L-homocysteine biosynthesis; L-homocysteine from S-adenosyl-L-homocysteine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 6">Belongs to the adenosylhomocysteinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.3.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372099.1">
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</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
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    <sequence length="172" mass="20065" checksum="6B160F2A5A71EF7D" modified="2011-01-11" version="1">MKYLKDCPEPGMGTWYFEIDSNGVAYRQIVIQDDGTYIASNRKHEQYHFLLAEKAIDDTEPYYTKITKKEFEEVWSNNLHTSNKEWHQVKTALPVGTKVTGYIEAFFPHGTLIHIFQHNAVGLADTHSYAEKTPSEWMYPRHEVTAIVQGYDELNQWVILEQTQVFKNKFTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
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    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
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        </location>
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        </location>
    </feature>
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    </evidence>
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    </evidence>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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    </evidence>
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    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="397" mass="42330" checksum="BA8D61B138BEAA98" modified="2011-01-11" version="1">MNIKNKIWFKTALLSISLVLTSASAISAIIPMMLNQLPGVSSSLIESIVTIPSFSMMLFVLLSGPISSRLGKKNTVLLGLLLVVIGGILPMLTTNITWILALRLVLGAGLGMFNSLAVSLISDFFEGDERAQLVGFQSAVQGLGSSLATFVAGQLALIDWPFAFLCYAITIPIALLFFFIIPEPEREEPTASTTGTGHKSGGMSLPVLGLGAALFLFMTFIMIVYTKTGIMIAEKSMPNAGFLGTALTLFSLSTMIAGFLFGRIYKWFRNYAPFISSLLTATGFVLLWFAQNVTMVTVAMLIIGFSFALFIPYIFTILTKIVPKGSETISISIAMVGSNLGAFASPYVIKLVGVLSGNETASFSFLVSAIVFMIAALLCLGIAIRGKGSKTQTAVHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E903</accession>
    <name>E3E903_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nickel ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">oppF7</name>
        <name evidence="5" type="ORF">PPSC2_24695</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373743.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12190"/>
    <dbReference type="EnsemblBacteria" id="ADO59210">
        <property type="protein sequence ID" value="ADO59210"/>
        <property type="gene ID" value="PPSC2_24695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5232"/>
    <dbReference type="eggNOG" id="COG4608">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_23_9"/>
    <dbReference type="OMA" id="MVQGEIV"/>
    <dbReference type="OrthoDB" id="1303270at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="3"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="49"/>
            <end position="56"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="29674" checksum="78A45534F6087F1F" modified="2011-01-11" version="1">MILELKNVTKAYPVRRRRKGWFNTRQSEQQAIQKVSLELRQGECLGLVGESGSGKSTLAQCILGLESLTSGEIWLDHRPIHTRRMKDIHLYKRIQLVAQDSASSLHPRMTIQDILMEPIRNYFPKRKVRALDICLSLLESVGLEADSLGKYPAQLSGGQKQRVCIARALAVEPEIILFDESVANLDTTTQSSVLDMLKRMQLERQLSYLFITHDLQSTRTFCDRVAVMVQGEIVEIFEDWDEELLKHEYTRALFQTLAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E995</accession>
    <name>E3E995_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_15965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371954.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57368">
        <property type="protein sequence ID" value="ADO57368"/>
        <property type="gene ID" value="PPSC2_15965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3410"/>
    <dbReference type="eggNOG" id="ENOG5032FKF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2899946_0_0_9"/>
    <dbReference type="OMA" id="TDMIDEA"/>
    <dbReference type="OrthoDB" id="2075822at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7206" checksum="511C9BD7F8A24822" modified="2011-01-11" version="1">MKKHNSEKKNLTDDQIEYKQSLDKREPGFDRIPDPDADSPAATDMIDEAVGRGIDKLRNDFTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9H6</accession>
    <name>E3E9H6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Anti-sigma-W factor RsiW</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mukB</name>
        <name evidence="5" type="ORF">PPSC2_17070</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily. Anti-sigma-W factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372189.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3652"/>
    <dbReference type="EnsemblBacteria" id="ADO57607">
        <property type="protein sequence ID" value="ADO57607"/>
        <property type="gene ID" value="PPSC2_17070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3645"/>
    <dbReference type="eggNOG" id="COG5660">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_681230_0_0_9"/>
    <dbReference type="OMA" id="YVDHELG"/>
    <dbReference type="OrthoDB" id="1934722at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1320">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041916">
        <property type="entry name" value="Anti_sigma_zinc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027383">
        <property type="entry name" value="Znf_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13490">
        <property type="entry name" value="zf-HC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <feature type="domain" description="zf-HC2" evidence="4">
        <location>
            <begin position="3"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="151"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="151"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="208"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="245"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="309"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00024438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="487" mass="52087" checksum="01A9032AE5A7B2AB" modified="2011-01-11" version="1">MKCGEEVMDWMQRYVDHELGEEETSQLMNHIATCPDCAEKFHILQTLSRELEELPAVSPAFSLVDSIMPQLDAIDRAREEQGSALQEMQPVAADPEPGTGLGQRTQPVPWWNRVGGRAAMGVAAAAVVLGIVVFNFEPKTVQDAEGILTSQSPEVTSQQNQTEIPGTTNGSGGRDATIGAESTKPPSEQGQGADSSLTPADKEPDLGDQGINSSDDKKNPSKPDAGKVDDQQAGEEPLTKSAPTKHSSRQDEKQGQPNVDRQASKDDSSADAPQSDDKQLKQKKSDQPTIAPDEQLDPKMEKAPLADTGTAQEDNSDDTSTNDASSSLSQELKVQSRIASNETSKDTTSKSVTKDAGNSLGADSSNAASNDEQSSVSQDPVRREGFVSNSLVSPDSNNASTYGAQSASTDQFNSPDGSYAVAIEGKKLKVYKLSDNGVDRTTLEVRTLKGAWVKGSWSDDSQTFMYETEQDGTASKYTYTVPRSTGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J5</accession>
    <name>E3E9J5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">von Willebrand factor A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yeaD</name>
        <name evidence="3" type="ORF">PPSC2_17160</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57626.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886013.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04495"/>
    <dbReference type="EnsemblBacteria" id="ADO57626">
        <property type="protein sequence ID" value="ADO57626"/>
        <property type="gene ID" value="PPSC2_17160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3665"/>
    <dbReference type="eggNOG" id="COG1721">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026152_0_0_9"/>
    <dbReference type="OrthoDB" id="848990at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002881">
        <property type="entry name" value="DUF58"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01882">
        <property type="entry name" value="DUF58"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="13"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="DUF58" evidence="2">
        <location>
            <begin position="209"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57626.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="415" mass="47265" checksum="7C0E4F3A79737EA5" modified="2015-05-27" version="2">MNMVKRKRRLPRLSGRIWLMLLIWVVCLLYLLFQGGKTSVMLLSMVTLLIIYLWLVGLSGVRRVQGHRQLSQGSEFGELLHAGDQVHVKLSLSIPGFLPLPYVIVREVLKRHTGESWSFEDSVIPSMKGGGQLTFQTPALERGSYYFEETECVSEDIFGLLEHKGRLNARGEFRVLPRTVFIPYWQINDRRSRMSGPQTVQTRTRRETTQINGVRDYVYGDRFSRIHWNATARTGSWKSKEFEHETVPKTMLVLDVQTNHYVNADQFELAVSSTASLLEYGGRERMGVGLCTAGEKGTVFQPSEQTMERQRMMHHLVDIHTTSQGSLMTAIESCVRQFPQGCYFILISPLKDHQALELLRWADTRGMTPCHVYIGEDSAQGEAEKWMSMLRARGIKGYDVESLEELPAVMGGGTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9K1</accession>
    <name>E3E9K1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372213.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04525"/>
    <dbReference type="EnsemblBacteria" id="ADO57632">
        <property type="protein sequence ID" value="ADO57632"/>
        <property type="gene ID" value="PPSC2_17190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3671"/>
    <dbReference type="eggNOG" id="COG1988">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097802_3_1_9"/>
    <dbReference type="OMA" id="MGRAHLI"/>
    <dbReference type="OrthoDB" id="1667936at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007404">
        <property type="entry name" value="YdjM-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04307">
        <property type="entry name" value="YdjM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="238" mass="25980" checksum="F3C00D277747381D" modified="2011-01-11" version="1">MMGRAHLIIGTGVSLSVLALSGYEVTPAAVAAAVVGSLLPDIDEPNSMLVSRALPNKMLRLVQLLMIGAAGWVFFTRLAPPPWNLVLALLMISASFMPSRSMRKVIIFLIGIGLAWYGESYAPWNYIAGCLLIICTLVPHRGLTHTVYGTVAWTAMLYGTTRLHGDSIWLAGGIAYLLHLLADSLTNNGIKPLPPFKWKLRFRLMSTGTRKGTKVENICITLTAVLVVIALLRYKHLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9K4</accession>
    <name>E3E9K4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lplA2</name>
        <name evidence="3" type="ORF">PPSC2_17205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372216.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04540"/>
    <dbReference type="EnsemblBacteria" id="ADO57635">
        <property type="protein sequence ID" value="ADO57635"/>
        <property type="gene ID" value="PPSC2_17205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3674"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037301_0_0_9"/>
    <dbReference type="OMA" id="IFTADWT"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022627">
        <property type="entry name" value="DUF3502"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12010">
        <property type="entry name" value="DUF3502"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168729" evidence="1">
        <location>
            <begin position="38"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3502" evidence="2">
        <location>
            <begin position="375"/>
            <end position="508"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="513" mass="58515" checksum="9141DB0FA114ADFE" modified="2011-01-11" version="1">MTFTKKRKQRMSILIAVMVIMALLAGCGGGSGNSAQKANGEDDKSQKVQLQFYMLGDAPKDLPTIEAEINKLAEKDLNATVKFNYTTWTDWDQKYKLLLSSGQPIDLIFTADWTQYQAYAKKGAFLPLDDLLPKAAPALQKFVPQDMWDGVKIGGKIYTVPGTYKEYVTNGFVWREDLREKYNLPKPTDIKSYEAYMDGIRQHEPNMKTLSLNSDIKGNLHDRYTELVTKSVGALPYGIGIKYEKPTEVYKFWGSDEQKEELNTYKRWADKGFIPKNVLNVKDTLQDQVTSGKAASIFGDNPTRFNDMVIKLKASHPDWKLEYYPFPLTTGYATPVHPIHNGFAIPKSSPNPARALAFYEKLVTDKRYNLLTQYGIEGKNYEVKDGYYQMIGSGSTNGFSREGMNSWAWRNPEYMLFDSGFDRVKKIFAELDKIQKPDLFTGFAEDYTTYQAEKAALEQVEKQYLYPLQAGLIDNVDQGLETFMQKANQAGLEKIQTEYTKQWEAYVKEKGIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Y5</accession>
    <name>E3E9Y5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Probable GTP-binding protein EngB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">engB</name>
        <name evidence="10" type="synonym">ysxC</name>
        <name evidence="10" type="ORF">PPSC2_19495</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Necessary for normal cell division and for the maintenance of normal septation.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372691.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06695"/>
    <dbReference type="EnsemblBacteria" id="ADO58118">
        <property type="protein sequence ID" value="ADO58118"/>
        <property type="gene ID" value="PPSC2_19495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4158"/>
    <dbReference type="eggNOG" id="COG0218">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033732_3_0_9"/>
    <dbReference type="OMA" id="LMMDIRH"/>
    <dbReference type="OrthoDB" id="1746051at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01876">
        <property type="entry name" value="YihA_EngB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00321">
        <property type="entry name" value="GTPase_EngB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030393">
        <property type="entry name" value="G_ENGB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019987">
        <property type="entry name" value="GTP-bd_ribosome_bio_YsxC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03598">
        <property type="entry name" value="GTPase_YsxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51706">
        <property type="entry name" value="G_ENGB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-0132">Cell division</keyword>
    <keyword evidence="6 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0717">Septation</keyword>
    <feature type="domain" description="EngB-type G" evidence="9">
        <location>
            <begin position="22"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="23142" checksum="59F24EBD65D151F8" modified="2011-01-11" version="1">MKVTKAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQQLNYYRINDELYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSKDDIMMYDWLRHNGLPVCVVGTKADKIPKTRREKHYKVIKQELGILPGGLFIPFSSEEGMGKEELWSVISSYIENDDEEQTEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA04</accession>
    <name>E3EA04_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Fe-S oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_19585</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372709.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06805"/>
    <dbReference type="EnsemblBacteria" id="ADO58137">
        <property type="protein sequence ID" value="ADO58137"/>
        <property type="gene ID" value="PPSC2_19585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4176"/>
    <dbReference type="eggNOG" id="COG0641">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_3_4_9"/>
    <dbReference type="OMA" id="GPENIND"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023867">
        <property type="entry name" value="Sulphatase_maturase_rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43273">
        <property type="entry name" value="PTHR43273"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01384">
        <property type="entry name" value="thioether_bond_formation_requi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="6">
        <location>
            <begin position="124"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="510" mass="58377" checksum="4A737CB1A24B7DCE" modified="2011-01-11" version="1">MILDSTVMEFFRNIEKQYGNYSRLFKLFQTKNKSYLYDVGTGKVMECNEIEYTFLNNLQLYGDIAKVINPIKVNDDTLTILIDLIHVAHEQHLFQAPPLLSFALSEDEVLKNAKSHLEQVTLELTEQCNMACHYCIYHSGNIDFREFGRRHMSWQVAELAIDYTLKNSGKKVAVTFYGGEPLIEFKLLKHCVAYALENGAGKDLTFSMTTNLTLMTAEIAEYLSTIPNFGVVCSIDGPKEIHDCRRVFKNGAGTYDKAIHGLKYLINAYGEKSNSLISLSMVTPRPTNDAVMKKIQNFFNSLSWVPKDITKNISYVRHSSDIEKTITEENPIHCYDNPVGNWTTDLMLNNTYTSQSNPFTIDFLHKQFSIIHDRILTETPYPNYNLNGCCSPATRRIYVTANGDFHLCERIGKSPSVGNVYSGLDETVLIDRYIEDYCKESLPQCSECWAIRLCSVCYVECYDSDKFNIEKKRMACRRSLDMLEHALISYHTILENKPHLLEALNHITLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA06</accession>
    <name>E3EA06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372711.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4189"/>
    <dbReference type="EnsemblBacteria" id="ADO58139">
        <property type="protein sequence ID" value="ADO58139"/>
        <property type="gene ID" value="PPSC2_19595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4178"/>
    <dbReference type="HOGENOM" id="CLU_1282187_0_0_9"/>
    <dbReference type="OrthoDB" id="2109951at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168742" evidence="1">
        <location>
            <begin position="28"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="215" mass="22851" checksum="755DE8CC17B1A4E9" modified="2011-01-11" version="1">MLMLKKMCIVLCGFLLMGMPLGSSSNAASNDVKNINLTAINCNVTVTKTSASDFSYEYNKSLYTVTSTLSGYTIYITVKGKGSVNGISDRVNILIPEKSYEKITVESTKAGVSLPELNTNLDITGVDGSSMSVRVPVGYSKAINYDNTKGSGSLTFSKGASDYTVTVKTTASALSVPAGWPLFRPNLTYNYINGAGKAKINITLENSAFSIAAQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA85</accession>
    <name>E3EA85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase M23</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yunA</name>
        <name evidence="3" type="ORF">PPSC2_20675</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372946.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07920"/>
    <dbReference type="MEROPS" id="M23.A06"/>
    <dbReference type="EnsemblBacteria" id="ADO58377">
        <property type="protein sequence ID" value="ADO58377"/>
        <property type="gene ID" value="PPSC2_20675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4410"/>
    <dbReference type="eggNOG" id="COG0739">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_849020_0_0_9"/>
    <dbReference type="OMA" id="WSFDPYP"/>
    <dbReference type="OrthoDB" id="1891666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168284" evidence="1">
        <location>
            <begin position="34"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M23" evidence="2">
        <location>
            <begin position="236"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="40972" checksum="B2983451C41009F0" modified="2011-01-11" version="1">MPYPTRAVRAVRLLSLLLCATTLTTACPLPAHASAEHTKSSSAGNNLTANIDASHASSSLYTSRLALYHSIEALTGVPWYRLAAIDQYERTLTVAHPKDRKHAERIIGIFVTGPVWSGLLNPDSEDQNPRSIELFSGLGQDGSGDGIADRNNDKDLLFSIASYLGKYGNSEDEFGIAVWEYYHNSRSVQRVQQFAKLYQTYGKLDLVSQAFPLPLGSIYSYRSTWGSRRSWGGYRIHEGTDLFAGYGVPVRSTCYGVVEMKGWNPFGGWRIGIRDLNNRYHYYAHLSGFDKTVHNGDIVKPGQTVGWVGSSGYGKPGTQGKFPPHLHYGIYRDNGWTDWSFDPYPLLRQWEQSERKALKSGKTKGTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA86</accession>
    <name>E3EA86_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yunB</name>
        <name evidence="2" type="ORF">PPSC2_20680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372947.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07925"/>
    <dbReference type="EnsemblBacteria" id="ADO58378">
        <property type="protein sequence ID" value="ADO58378"/>
        <property type="gene ID" value="PPSC2_20680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4411"/>
    <dbReference type="eggNOG" id="ENOG5031XUS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067338_0_0_9"/>
    <dbReference type="OMA" id="GIIYYIP"/>
    <dbReference type="OrthoDB" id="1637742at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014197">
        <property type="entry name" value="Sporulation_prot_YunB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09560">
        <property type="entry name" value="Spore_YunB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021383">
        <property type="entry name" value="YunB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02832">
        <property type="entry name" value="spo_yunB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="216"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27126" checksum="B962B0DE415023BF" modified="2011-01-11" version="1">MWLIVALALLVGIVQVAAYVEQHLKPPMMHLAKVRVKQMATEAINSAITAQVEQGKTADNLIEWRTDTQGRTSGFVLNYAEHMRITSDTLKAVKATMDSMSHFDESVPIGQALGSPLLAAYGPKVPLKVEPHGAIKVDLNTRQQDAGINMILVEVYIRITTEVSVVIPFEMQPQIVETEIPVSYLLVVGNVPMYYYDNQGKPVGKNGATAPQLALPSHSIESSGAVDSSIESVPEIQEEPNSLRQSPTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBB3</accession>
    <name>E3EBB3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">Chia</name>
        <name evidence="3" type="ORF">PPSC2_21080</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373014.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08310"/>
    <dbReference type="CAZy" id="GH18">
        <property type="family name" value="Glycoside Hydrolase Family 18"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58445">
        <property type="protein sequence ID" value="ADO58445"/>
        <property type="gene ID" value="PPSC2_21080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4482"/>
    <dbReference type="eggNOG" id="COG3858">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020253_0_0_9"/>
    <dbReference type="OMA" id="NVISPTW"/>
    <dbReference type="OrthoDB" id="1081028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008061">
        <property type="term" value="F:chitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011583">
        <property type="entry name" value="Chitinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029070">
        <property type="entry name" value="Chitinase_insertion_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001223">
        <property type="entry name" value="Glyco_hydro18_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00704">
        <property type="entry name" value="Glyco_hydro_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00636">
        <property type="entry name" value="Glyco_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51910">
        <property type="entry name" value="GH18_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="GH18" evidence="2">
        <location>
            <begin position="257"/>
            <end position="572"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="572" mass="64170" checksum="D1EE16430D194271" modified="2011-01-11" version="1">MARNHSRRRRKRSRFKGAASLLLIAAIICAITVVWYGNPLHEKPDWQGSVRPIFMKGKLTGYEAQSSGKNMLMPLKLIQGQIDPTIRYEDDSQTVIMTTRQSLLHMNVSKTQGELNGKTYTSSAAPQIISGEVYVPIEAVREVYGISIHEDPVTGAVILMKAGEKVRLGSVEKKDGQQDARIALRKEASSLSFILADVSQQTKVRIWSQQGDWYFVQLDNGYAGYIKSDCISEGEELVIPSVKDDLSISEKHWQGKPVNLAWEAVYNRRPDPSKFDPMPGVNVVSPTWFSVVDHEGTVESKADPAYVSWAHRKGIEVWGLLSNSFNPEITTEALSTFERRKSIVDQMISLAQENDLDGINIDFENVHTKDGPNVTQFLRELKPMAREHDLILSIDVTPKSQSEMWSAFLDRKSLGAITDYLMVMAYDEHWAASPKAGSVASLPWTETSIKRILQEDEVPPQKVILGIPLYTRVWSETPKEGKIKVTSKSIGMESAAEIVAQFKLKPKFKASEGQNYVEYTEDGVVKKIWLEDQISLKARVELAQSLNLGGIGVWSRSFADKNAWITLKEIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBH1</accession>
    <name>E3EBH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sspH</name>
        <name evidence="3" type="ORF">PPSC2_22020</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Spore core</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SspH family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373211.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09170"/>
    <dbReference type="EnsemblBacteria" id="ADO58645">
        <property type="protein sequence ID" value="ADO58645"/>
        <property type="gene ID" value="PPSC2_22020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4685"/>
    <dbReference type="eggNOG" id="ENOG5033AUF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_191960_2_1_9"/>
    <dbReference type="OMA" id="MNTQRAK"/>
    <dbReference type="OrthoDB" id="2092706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042601">
        <property type="term" value="C:endospore-forming forespore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030436">
        <property type="term" value="P:asexual sporulation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00667">
        <property type="entry name" value="SspH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012610">
        <property type="entry name" value="SASP_SspH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08141">
        <property type="entry name" value="SspH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02861">
        <property type="entry name" value="SASP_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7385" checksum="64DD0D1ADF559623" modified="2011-01-11" version="1">MNVQRAQEIASSPIMANVLCDGLPIYIQHVNEQRETARIYALNNPEEEREVPLYALTERDQTLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM3</accession>
    <name>E3EBM3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">dTDP-4-dehydrorhamnose 3,5-epimerase</fullName>
            <ecNumber evidence="3">5.1.3.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Thymidine diphospho-4-keto-rhamnose 3,5-epimerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rfbC3</name>
        <name evidence="4" type="ORF">PPSC2_23000</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-beta-L-rhamnose</text>
            <dbReference type="Rhea" id="RHEA:16969"/>
            <dbReference type="ChEBI" id="CHEBI:57649"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="5.1.3.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.13" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373379.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4901"/>
    <dbReference type="EnsemblBacteria" id="ADO58841">
        <property type="protein sequence ID" value="ADO58841"/>
        <property type="gene ID" value="PPSC2_23000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4870"/>
    <dbReference type="eggNOG" id="COG1898">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090940_1_0_9"/>
    <dbReference type="OMA" id="GMHFQRP"/>
    <dbReference type="OrthoDB" id="1618609at2"/>
    <dbReference type="UniPathway" id="UPA00124"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008830">
        <property type="term" value="F:dTDP-4-dehydrorhamnose 3,5-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019305">
        <property type="term" value="P:dTDP-rhamnose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000888">
        <property type="entry name" value="dTDP_sugar_isom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21047">
        <property type="entry name" value="PTHR21047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00908">
        <property type="entry name" value="dTDP_sugar_isom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01221">
        <property type="entry name" value="rmlC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <feature type="site" description="Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose" evidence="2">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU364069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="177" mass="20841" checksum="33881B44F9D847D7" modified="2011-01-11" version="1">MIFTETVLSGVYLIGLELLTDVRGHFARAWCQDEFKSHGLECSFVQCNISYNEKKGTLRGLHYQAPPYEEVKIVRCTKGSIYDVIVDLRPDSPTYKQWLSIELSDKNYKMLYIPKGFAHGYQTLSDNTEVFYQVSQMYKAEYARGVKWDDPEFNIEWPEEEKRIMSEKDQNCDRYRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW6</accession>
    <name>E3EBW6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">msmE7</name>
        <name evidence="2" type="ORF">PPSC2_24150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373625.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11655"/>
    <dbReference type="EnsemblBacteria" id="ADO59090">
        <property type="protein sequence ID" value="ADO59090"/>
        <property type="gene ID" value="PPSC2_24150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5113"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_12_3_9"/>
    <dbReference type="OMA" id="FQEWAKA"/>
    <dbReference type="OrthoDB" id="480174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168745" evidence="1">
        <location>
            <begin position="24"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="45752" checksum="DF671AFCEB77D9BD" modified="2011-01-11" version="1">MWNGVKRLSTLAAILLLVIIVSACNRSDNSGKVQIEFFQNKPEAKGSFDKLIAQFNQEHPGIEVTQVNPPEAETVLLTRVVKNDVPDIVGLGATDTYSILAQSGIFTDLANTELPRTVDPIYLKMLKDVTGVDPVYGIPYAANANGVMYNKTLFKEMGIQVPKTWDELIATAQKIKAAGKIPFYFTYKDDWQTNLPFNALGPNLVGIDFFLQRRENQVTFQDKYREVAEKQLELLKYGHSDNFGKNYADGNRAFANGQGLMYIQGSWAISEIRKANPKVELGFFPLPSGNDAKAVKLVSGIDTLLAVSEGTPHKKEAKEFIAFLLKPENSKQYITEQTLFSAVKGVTQDDPSVTELLPYFKSGRVIDFADHYIPKAVQLNSIVQAFLQNGDIDAYLAKLDREWNKVANRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC18</accession>
    <name>E3EC18_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 10">Adenylosuccinate synthetase</fullName>
            <shortName evidence="8">AMPSase</shortName>
            <shortName evidence="8">AdSS</shortName>
            <ecNumber evidence="8 10">6.3.4.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">IMP--aspartate ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">purA</name>
        <name evidence="11" type="ORF">PPSC2_25355</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 10">
            <text>GTP + IMP + L-aspartate = GDP + 2 H(+) + N(6)-(1,2-dicarboxyethyl)-AMP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:15753"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57567"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="EC" id="6.3.4.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8 10">Purine metabolism; AMP biosynthesis via de novo pathway; AMP from IMP: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1 8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 10">Belongs to the adenylosuccinate synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.4" evidence="8 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373891.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12850"/>
    <dbReference type="EnsemblBacteria" id="ADO59358">
        <property type="protein sequence ID" value="ADO59358"/>
        <property type="gene ID" value="PPSC2_25355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5374"/>
    <dbReference type="eggNOG" id="COG0104">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029848_0_0_9"/>
    <dbReference type="OMA" id="FHHAKPI"/>
    <dbReference type="OrthoDB" id="232152at2"/>
    <dbReference type="UniPathway" id="UPA00075">
        <property type="reaction ID" value="UER00335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004019">
        <property type="term" value="F:adenylosuccinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044208">
        <property type="term" value="P:'de novo' AMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd03108">
        <property type="entry name" value="AdSS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00011">
        <property type="entry name" value="Adenylosucc_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018220">
        <property type="entry name" value="Adenylosuccin_syn_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033128">
        <property type="entry name" value="Adenylosuccin_syn_Lys_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042109">
        <property type="entry name" value="Adenylosuccinate_synth_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042110">
        <property type="entry name" value="Adenylosuccinate_synth_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042111">
        <property type="entry name" value="Adenylosuccinate_synth_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001114">
        <property type="entry name" value="Adenylosuccinate_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11846">
        <property type="entry name" value="PTHR11846"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00709">
        <property type="entry name" value="Adenylsucc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00788">
        <property type="entry name" value="Adenylsucc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00184">
        <property type="entry name" value="purA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01266">
        <property type="entry name" value="ADENYLOSUCCIN_SYN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00513">
        <property type="entry name" value="ADENYLOSUCCIN_SYN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8 10" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 8 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 8 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 8 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="IMP binding" evidence="8">
        <location>
            <begin position="13"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="8">
        <location>
            <begin position="38"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="298"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="12"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="40"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="238"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="302"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="304"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="330"/>
            <end position="332"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="412"/>
            <end position="414"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="428" mass="47146" checksum="96961B6A2BFB11DF" modified="2011-01-11" version="1">MSTVVVVGTQWGDEGKGKITDYLAESAEVVARYQGGNNAGHTILIDGKKYKLSLIPSGVFYEDKKCVIGNGMVVNPAALIEEITYIHDNGFSTKNLVISDRAHVIMPYHMTLDVLEEDRKGPNKIGTTRKGIGPAYMDKAARNGIRIADLLDAEEFEKKLRHLTKEKNQVIEQVYGGEPLDVEEILKQYLEYAEFIRPYVADTSVVLNDAIDANRKVLFEGAQGVMLDIDQGTYPYVTSSNPSAGGVCIGSGVGPSKIQQVIGVAKSYTTRVGDGPFPTELNDEVGDYIRETGHEYGTVTGRARRVGWFDSVVVRHARRVSGLTGLSLNSLDVLTGLKTVKICTGYKYRGEIITHYPASLKMLAECEAVYEELPGWSEDITGVKTLEELPENTRKYVQRVSELTGIPIAIFSVGRNRDQTNQVLPIYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECT0</accession>
    <name>E3ECT0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lactose ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lacF5</name>
        <name evidence="7" type="ORF">PPSC2_01905</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369014.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14670"/>
    <dbReference type="EnsemblBacteria" id="ADO54374">
        <property type="protein sequence ID" value="ADO54374"/>
        <property type="gene ID" value="PPSC2_01905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.383"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_2_9"/>
    <dbReference type="OMA" id="FHMVIWL"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035277">
        <property type="entry name" value="MalF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="154"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="200"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="260"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="33146" checksum="6EF166110BEE47A1" modified="2011-01-11" version="1">MIKWLRSESFTAWAFMTPGLLLLAVFVFWPIIYSIPLALTDYSVISDTHFVGLDNFEAAFKDRNFLISIWNSLLYVLIVPFLQLFSILMAVLVNSRIPGIKIFRTTYYIPVVTSMVAVALIWSWLLGNNSVVNYLLIQAGLISKDIHWLSDSNLALYVLMFITMWKGLGYYMMLYLAGLQNIPHDLYEAARVDGASRWRLIIHITLPLLKPYVLFCTLISLMAAIRVFDEVYVLTKGGPGTATLTSSLYIFQKGMEQFNFGYASALGLIVGAMIAVLSIIVFRFNRKGGVNPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECT6</accession>
    <name>E3ECT6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">glcK3</name>
        <name evidence="1" type="ORF">PPSC2_01935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54380.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14700"/>
    <dbReference type="EnsemblBacteria" id="ADO54380">
        <property type="protein sequence ID" value="ADO54380"/>
        <property type="gene ID" value="PPSC2_01935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.389"/>
    <dbReference type="eggNOG" id="COG1940">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036604_0_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54380.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="32674" checksum="3FFF449BC0097BB7" modified="2015-05-27" version="2">MVVAVALNKVIGIDIGGTSVKAAIVARDGSVLDEIRMDTDASRGRDWVLSRVSDSVFGLMCSFGDTSVSTPVGIGALGIATAGRVNVESGEVVYATDNLPGWQGTSLVRWAREKLALRAVADNDANAALLGEAWQGAGKGKQRLAMLTLGTGVGGAYMENGLLCRGAHWSGGDWGHSILFPGGHPCNCGKKGCAEQYVSGSALLRRGSECTGKLYCSGNEIVEEAAHGNLKTIQALDDYTADLAVLLANISVTLDPELIIVGGGVADAGDVWWPLLEKHLDRLGVQTEVSRAMLGNRAGFIGAARLAFEMTES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECY0</accession>
    <name>E3ECY0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Cysteine ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fliY1</name>
        <name evidence="11" type="ORF">PPSC2_04280</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369483.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17090"/>
    <dbReference type="EnsemblBacteria" id="ADO54849">
        <property type="protein sequence ID" value="ADO54849"/>
        <property type="gene ID" value="PPSC2_04280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.853"/>
    <dbReference type="eggNOG" id="COG0834">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_18_5_9"/>
    <dbReference type="OMA" id="SADWPPY"/>
    <dbReference type="OrthoDB" id="1632224at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0564">Palmitate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168363" evidence="8">
        <location>
            <begin position="33"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="9">
        <location>
            <begin position="58"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="PBPe" evidence="10">
        <location>
            <begin position="58"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="31261" checksum="AC4A6CEF7729B3E9" modified="2011-01-11" version="1">MKTRKKGFLVTTLMALALFSLVLSACGTKPEASNTSNGAGSSNEAAANQLEAIKKADVMKVGMMGTYPPYNFLNDNKELDGFDVDIAKELAKRIGVKAEFTAQEFSGLIPSLQKKKFDAVVSQVAITEDRKKAIDFTDPYITNNVNIIVNSKTNDITTLEDFKGKTIGVGLGTNDESYLRNEVLPKVGDFEIKTYDDVITSLKDLNSGRIDATINNLYALKPIIDKNGFQIKAVGEPIKSDQAAVAINQKTPELKAALNKALKEMKEDGTYKTIFKKWFGEEPKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED08</accession>
    <name>E3ED08_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ligB1</name>
        <name evidence="6" type="ORF">PPSC2_04410</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DODA-type extradiol aromatic ring-opening dioxygenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369511.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17240"/>
    <dbReference type="EnsemblBacteria" id="ADO54877">
        <property type="protein sequence ID" value="ADO54877"/>
        <property type="gene ID" value="PPSC2_04410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.881"/>
    <dbReference type="eggNOG" id="COG3384">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046582_2_1_9"/>
    <dbReference type="OMA" id="PEGSMSW"/>
    <dbReference type="OrthoDB" id="1728007at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008198">
        <property type="term" value="F:ferrous iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016701">
        <property type="term" value="F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07363">
        <property type="entry name" value="45_DOPA_Dioxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014436">
        <property type="entry name" value="Extradiol_dOase_DODA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004183">
        <property type="entry name" value="Xdiol_dOase_suB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02900">
        <property type="entry name" value="LigB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006157">
        <property type="entry name" value="Doxgns_DODA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LigB" evidence="5">
        <location>
            <begin position="8"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="29757" checksum="AC7E773C44DD1263" modified="2011-01-11" version="1">MTLPSIFVAHGSPTLAVENNAYTSFLAKLGASLPRPKGIIIFSAHWDSPDQCIGADDQHAALHDFYGFPEEMYSLDYPAPGDPKLYEEIGHLFSQHNLFHQPVRNRGLDHGAWVVLRHIYPDADIPVVPLSIDSRRDPQEQYEIGRMLAPLREQGILILGSGGLVHNLRTLKQTSEPADWAVQYDDWIAQQLQDWNLRHLFQYDKKAPYAKQAVPSYGIEHFSPLFYVMGAADHDRSARKLFQSYVLGSLSLNCWAFGQENDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDA0</accession>
    <name>E3EDA0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">DNA-directed RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">rpoN</name>
        <name evidence="11" type="ORF">PPSC2_02425</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-54 factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369097.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0473"/>
    <dbReference type="EnsemblBacteria" id="ADO54457">
        <property type="protein sequence ID" value="ADO54457"/>
        <property type="gene ID" value="PPSC2_02425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.467"/>
    <dbReference type="eggNOG" id="COG1508">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020569_1_1_9"/>
    <dbReference type="OMA" id="NPPAIEF"/>
    <dbReference type="OrthoDB" id="1906842at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001216">
        <property type="term" value="F:DNA-binding transcription activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000394">
        <property type="entry name" value="RNA_pol_sigma_54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007046">
        <property type="entry name" value="RNA_pol_sigma_54_core-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007634">
        <property type="entry name" value="RNA_pol_sigma_54_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038709">
        <property type="entry name" value="RpoN_core-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32248">
        <property type="entry name" value="PTHR32248"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00309">
        <property type="entry name" value="Sigma54_AID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04963">
        <property type="entry name" value="Sigma54_CBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04552">
        <property type="entry name" value="Sigma54_DBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000774">
        <property type="entry name" value="RpoN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00045">
        <property type="entry name" value="SIGMA54FCT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02395">
        <property type="entry name" value="rpoN_sigma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00718">
        <property type="entry name" value="SIGMA54_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2 11" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sigma54_CBD" evidence="10">
        <location>
            <begin position="84"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma54_DBD" evidence="9">
        <location>
            <begin position="279"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="438" mass="50248" checksum="EAFF882BD132B7D3" modified="2011-01-11" version="1">MRYGLQQEQTFRLAMTPELRQAITILQYSSVDLMSYLHEQANENPIIDLAEIDMSIERINTEEEYSPRKNDNPVDLLDFVSNPADNLYRHLKAQLGMVSGLSRLQQMIGMFLIGNLNEKGYLELDVNIVAGILDVPTDEVENILALIQGFEPAGIAARSLEECLLLQLRYAGNDDVYLEEIVRHHMVNLSCNRIQKIADALGIDIHMVQQITDQIRKLNPCPGAAFAPYERQHHIADISVEKFKNDYIVTVNDITVPRVGINPFYQSMLRKPAMEEEKRFLREKMNTALWLIHSLEQRRLTLMRVAQAIVDRQRDFFEHGVYHLKSMTQKEIAEITGLHESTISRAVSNKYMQTPRGLFELKYFFTSALGSKDGDATSSESAKMRIKQIIDGEEKQKPFSDQAITELMAKEGLELSRRTVAKYREELGYLSSARRKVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDJ9</accession>
    <name>E3EDJ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55307.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599550.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55307">
        <property type="protein sequence ID" value="ADO55307"/>
        <property type="gene ID" value="PPSC2_06400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1317"/>
    <dbReference type="eggNOG" id="ENOG50346YG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1883716_0_0_9"/>
    <dbReference type="OrthoDB" id="1699961at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55307.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="14733" checksum="A0EE368E230A5ED2" modified="2015-05-27" version="2">MEGRLIIVTAPNEAGRSFVKLLMFKKLAFAVLTNSTQEERQLKKMGVEHIVRINTMQAGKWNFPSKEIGSVYLFENSLNLTCRFLQICRPLTSELIYVITHGCNPQGIYRGLGADHVIYTLNGEVGFLLNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDY6</accession>
    <name>E3EDY6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidylprolyl isomerase</fullName>
            <ecNumber evidence="2">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">prsA3</name>
        <name evidence="7" type="ORF">PPSC2_00315</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368699.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13330"/>
    <dbReference type="EnsemblBacteria" id="ADO54052">
        <property type="protein sequence ID" value="ADO54052"/>
        <property type="gene ID" value="PPSC2_00315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.62"/>
    <dbReference type="eggNOG" id="COG0760">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034646_10_0_9"/>
    <dbReference type="OMA" id="EIDEYWE"/>
    <dbReference type="OrthoDB" id="1838755at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
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    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="PPIase_dom_sf"/>
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        <property type="entry name" value="PPIase_PpiC"/>
    </dbReference>
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        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="Rotamase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="PPIC_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
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    <keyword evidence="4" id="KW-0697">Rotamase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="PpiC" evidence="6">
        <location>
            <begin position="168"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="316" mass="35269" checksum="E5B5EA0D635460EC" modified="2011-01-11" version="1">MTTREKGLWTAVIILTVSVAALGGLIMLRGLLKPGDVSKDDGDHTVAEMGQEGISEEQWVAELKKRYGTNTLLQMLNRKAVQAEAKRLGIKITQEDLQQVLEQDSKGYDSEHAYFEEMQRQFGLNPVDLRNEAEYRIGLEKIATQGIQVEETEIDEYWEQHPEEFAVGKQIKLAAIYVAKAEEAETLLDRVKQGESFDMLLREHSVSGNPLGEDHSGQLGWLDEYDPFQPEAVMKAARELSSGDVAGPISVNDGYAVIYVQDVRLKNSPDKQQIRQQIRRSLALAQAAPLDEVEKSLRDKYGARILSGKEAPSASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDY9</accession>
    <name>E3EDY9_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Anthranilate synthase component II</fullName>
            <ecNumber evidence="2">4.1.3.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pabA</name>
        <name evidence="2" type="ORF">PPSC2_00330</name>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO54055.1"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13345"/>
    <dbReference type="EnsemblBacteria" id="ADO54055">
        <property type="protein sequence ID" value="ADO54055"/>
        <property type="gene ID" value="PPSC2_00330"/>
    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:anthranilate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
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        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd01743">
        <property type="entry name" value="GATase1_Anthranilate_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
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        <property type="entry name" value="GATASE"/>
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    <dbReference type="InterPro" id="IPR006221">
        <property type="entry name" value="TrpG/PapA_dom"/>
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    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00566">
        <property type="entry name" value="trpG_papA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GATase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="191" mass="21229" checksum="FBDBCF8AC8A211BC" modified="2011-01-11" version="1">MILVIDNYDSFTYNLVQYLGELGEEVTVKRNDEIDVKGIEELAPEHILISPGPCTPNEAGISLDVISHFKGRIPIFGVCLGHQAIGQAFGGKVIRADRLMHGKTSPILHHNTSVFEGLPSPFTATRYHSLLVERESLPECLEITAETAEGEIMGLRHKEFAVEGVQFHPESIITDYGHQLLRNFLKRKVGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE23</accession>
    <name>E3EE23_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Haloacid dehalogenase</fullName>
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        <name evidence="1" type="primary">yfnB</name>
        <name evidence="1" type="ORF">PPSC2_02730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54503.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0519"/>
    <dbReference type="EnsemblBacteria" id="ADO54503">
        <property type="protein sequence ID" value="ADO54503"/>
        <property type="gene ID" value="PPSC2_02730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.512"/>
    <dbReference type="eggNOG" id="COG1011">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_8_9_9"/>
    <dbReference type="OrthoDB" id="1204073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="18137" checksum="A6FBD7F911FA8A79" modified="2011-01-11" version="1">MEPSFTMLRMGEIVVGLEWGGLYRELLGDGNQLLMEGAMDVCHRLSKTHRMFVITNGITHTQIKRLKQSGLYKFFEDIFDSQSIGYQKPKEEFFNYVISHISEFNRKDALVIGDSLNTDIKGGLQSGIDTCWVNRTGQISPAEIKSTYTISNLMELTSIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE48</accession>
    <name>E3EE48_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-682</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-682</name>
        <name evidence="2" type="ORF">PPSC2_02840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369168.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0544"/>
    <dbReference type="EnsemblBacteria" id="ADO54528">
        <property type="protein sequence ID" value="ADO54528"/>
        <property type="gene ID" value="PPSC2_02840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.539"/>
    <dbReference type="eggNOG" id="ENOG502ZN3F">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_161340_0_0_9"/>
    <dbReference type="OMA" id="ERYITWE"/>
    <dbReference type="OrthoDB" id="2015462at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="12013" checksum="257E6521650B3646" modified="2011-01-11" version="1">MLPDLERKLLRILYNYFAQHRHMPTMAELSAKTGRRDSEITAALRHMEQERYITWENNTGTQHIVLLEGWERPSTYKPAQVEAGRPTTQTIQSGSTEYWTNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE96</accession>
    <name>E3EE96_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Haloacid dehalogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhjK</name>
        <name evidence="2" type="ORF">PPSC2_05070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369652.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1037"/>
    <dbReference type="EnsemblBacteria" id="ADO55019">
        <property type="protein sequence ID" value="ADO55019"/>
        <property type="gene ID" value="PPSC2_05070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1026"/>
    <dbReference type="eggNOG" id="COG0561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084693_0_0_9"/>
    <dbReference type="OMA" id="NRCNPLA"/>
    <dbReference type="OrthoDB" id="1861282at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006380">
        <property type="entry name" value="SPP_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05116">
        <property type="entry name" value="S6PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S6PP" evidence="1">
        <location>
            <begin position="12"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31165" checksum="9A08A25C17F6885F" modified="2011-01-11" version="1">MKVIYTPAVTEYLILFDFDETYYPHECLPEQLKMVYELEQYLQQLARNHQVKIAWVTGSSVQQIQAKMNIAGMTQLPHFIASNLGTELWEVEPDGQLVTVPSWAKIIRASEFSRRDVEDLISELKSTFNIVLHEQTQLGQSGYKMNYYYYPVSAVKTQYDISIIRHLAANHGIGININICNPKAGDPEHAYDVDFIPAGTGKKAAVQFLMDYSQVPLSKTLAFGDSGNDIEMLQMVAHGYLLQNATAEAKSFHNNVAPYAYAEGILHVCRNFFRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB2</accession>
    <name>E3EEB2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sacC1</name>
        <name evidence="7" type="ORF">PPSC2_05150</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369668.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18075"/>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55035">
        <property type="protein sequence ID" value="ADO55035"/>
        <property type="gene ID" value="PPSC2_05150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1043"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001528_3_1_9"/>
    <dbReference type="OMA" id="YYAGEYH"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018053">
        <property type="entry name" value="Glyco_hydro_32_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00609">
        <property type="entry name" value="GLYCOSYL_HYDROL_F32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="5">
        <location>
            <begin position="14"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="6">
        <location>
            <begin position="350"/>
            <end position="481"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="485" mass="55656" checksum="EC6DC543F09F0BE9" modified="2011-01-11" version="1">MNVVRQEKYRPSYHFSPKNGWMNDPNGMVYFEGRYHLFYQHHPFGTTWGPMHWGHAVSTDLVNWEERPIALEPDGLGTIFSGSAVVDERDTSGFFEGKPGLVAIFTHHYSLPNTDQIRQYQSLAYSTDSGESWIKYAGNPVLEDEHCIDFRDPKVFWHEPTEQWVMVLACGQTVRIYHSPNLKEWVFASEFGHGIGSHDGVWECPDLFPLWVDGERSQVKWVMLVSIGDHPEIREGSRTQYFTGEFDGTTFVADVESEKVRWLDYGRDNYAGVCWSDIPAEDGRRLFMGWMSNWRYANQTPTERWRGAMSIPRELALETRKGTVALIQRPVRELEGLRTPVLSLTEPSWEEVRNALSALQLDCYELVAEFATTGDFGFKVRVSDEQETLVGYTSAAQEVYVDRTRSGCSDFHEDFAVRHGTSLGILPDRMDIRLYVDRSSIEVFFDRGQVAITDLIFPDAEAKGLEIFPSEEQDTLFSLELYALK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EED7</accession>
    <name>E3EED7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkaline phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dedA3</name>
        <name evidence="2" type="ORF">PPSC2_06775</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370019.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1409"/>
    <dbReference type="EnsemblBacteria" id="ADO55388">
        <property type="protein sequence ID" value="ADO55388"/>
        <property type="gene ID" value="PPSC2_06775"/>
    </dbReference>
    <dbReference type="GeneID" id="66573585"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1395"/>
    <dbReference type="eggNOG" id="COG0586">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044208_1_0_9"/>
    <dbReference type="OMA" id="NYEIGRR"/>
    <dbReference type="OrthoDB" id="1928533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="201" mass="22777" checksum="AC41B85EA08D58EF" modified="2011-01-11" version="1">MDVEYLISIIEQYGYAALFFSLWLGIVGLPIPDEVIVMTGGAVTSMGILHPLPAFLIVYLGVVSGLSLGYVLGRSLGTPILDRLRRKKKMDKYITFSENLVHKYGNFTICISYLLPIVRHIVPYIVGINKMSFKRYALFSYSTGLIWTLIFFLLGRLFGDHVQAAGELIHRYGLQVALLLIMLTIIFFIMKFVWGKKTTEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EED9</accession>
    <name>E3EED9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55390.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599561.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55390">
        <property type="protein sequence ID" value="ADO55390"/>
        <property type="gene ID" value="PPSC2_06785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1397"/>
    <dbReference type="eggNOG" id="ENOG502ZT98">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086966_0_0_9"/>
    <dbReference type="OrthoDB" id="1380706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55390.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="27684" checksum="47A46A3C87ACDBB8" modified="2015-05-27" version="2">MSLSINRHLIKTSTSYDNSNTLKSNENGLNNTGHTTHKKSNDSLELSAEFMEYAGGMQAPLPSENYSYDYKYDQDTVALTTDEQKALLSDLQSYLTSSSALSETNEINNSTKNPLAAVSDLLSGVDLSTATDAEVSNLFDKIAESIQNNRPAPPEDDSFRPEVDGSGLPPMMQAMGGIMPPFAWNIQATTNQEDNTTTSEKELTVDEKRSLLSDLQNVLSSELLSGSVSAETDEEISALFDKIAKIFEQSVSASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEW3</accession>
    <name>E3EEW3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">tRNA-specific adenosine deaminase</fullName>
            <ecNumber evidence="3">3.5.4.33</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tadA</name>
        <name evidence="5" type="synonym">yaaJ</name>
        <name evidence="5" type="ORF">PPSC2_00500</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>adenosine(34) in tRNA + H(+) + H2O = inosine(34) in tRNA + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:43168"/>
            <dbReference type="Rhea" id="RHEA-COMP:10373"/>
            <dbReference type="Rhea" id="RHEA-COMP:10374"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:82852"/>
            <dbReference type="EC" id="3.5.4.33"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the cytidine and deoxycytidylate deaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.33" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368732.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13505"/>
    <dbReference type="EnsemblBacteria" id="ADO54086">
        <property type="protein sequence ID" value="ADO54086"/>
        <property type="gene ID" value="PPSC2_00500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.97"/>
    <dbReference type="eggNOG" id="COG0590">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025810_3_2_9"/>
    <dbReference type="OMA" id="PCQMCAG"/>
    <dbReference type="OrthoDB" id="1890883at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052717">
        <property type="term" value="F:tRNA-specific adenosine-34 deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002100">
        <property type="term" value="P:tRNA wobble adenosine to inosine editing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00972">
        <property type="entry name" value="tRNA_aden_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016192">
        <property type="entry name" value="APOBEC/CMP_deaminase_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028883">
        <property type="entry name" value="tRNA_aden_deaminase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14437">
        <property type="entry name" value="MafB19-deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00903">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2 3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="4">
        <location>
            <begin position="4"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="3">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18278" checksum="2CEDEB3E48414D8F" modified="2011-01-11" version="1">MTIMDHAYWMREAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDTDPTAHAEMVAIRQASEHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEPRFNHCTEVTSGVLQEECASMLTNFFRQLRQKRAAAKLSPPSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF12</accession>
    <name>E3EF12_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rpfG</name>
        <name evidence="6" type="ORF">PPSC2_02855</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54532.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025676220.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15670"/>
    <dbReference type="EnsemblBacteria" id="ADO54532">
        <property type="protein sequence ID" value="ADO54532"/>
        <property type="gene ID" value="PPSC2_02855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.543"/>
    <dbReference type="eggNOG" id="COG3437">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_546013_0_0_9"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037522">
        <property type="entry name" value="HD_GYP_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51832">
        <property type="entry name" value="HD_GYP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="44"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="100"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="194"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="228"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="3">
        <location>
            <begin position="252"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="HD-GYP" evidence="5">
        <location>
            <begin position="306"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="domain" description="HD" evidence="4">
        <location>
            <begin position="328"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54532.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="500" mass="56545" checksum="F9E3628DC140DD9F" modified="2015-05-27" version="2">MPIYKRFIQHVILNYIIGSFIAVLLVCMIFVFSTLNVAHYELLGLVKIVAFSSVIMIVCETIVFRMHLRPVHRFFQGNQETLKDVEAVYIRVHHLPNLSVLRIVGPHLLGFSIPAAVIALWMIHTGQLTFPFYYVGIACIGACLVASMHALVEFFLTMRAIKPLLEEIRDRTYQQYGLSLSLRGRVLLSLRHKFQLSATLIGAFPLFLFCLATQIRLERLEATDSGSYWAWAGTILIFGVAFAYLGGRLLTREIEQPIHHLLEKMNEVKEGRLNSNASDLYSDEFAELVEGFNMMIEGLKEREEKNGQLLDSYFATLAAALDARDAYTAGHSLRVAEYSVLIGRKGGLSETDLDLLRKTALLHDIGKIGVADAVLFKDGKLTDEEFDQIKMHPVMGESILRQVEPAYAMAPYLPGVRSHHERYDGKGYPDQLSGEDIPLFGRIIAVADAYDAMTSDRPYRKGMKEEKAVMILEEGKGTQWDPYFAELFVKEWRRNKGILS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF77</accession>
    <name>E3EF77_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytoplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yflK</name>
        <name evidence="2" type="ORF">PPSC2_03150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54597.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886083.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15960"/>
    <dbReference type="EnsemblBacteria" id="ADO54597">
        <property type="protein sequence ID" value="ADO54597"/>
        <property type="gene ID" value="PPSC2_03150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.603"/>
    <dbReference type="eggNOG" id="COG2258">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082566_1_0_9"/>
    <dbReference type="OrthoDB" id="1643056at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005302">
        <property type="entry name" value="MoCF_Sase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005163">
        <property type="entry name" value="YiiM-like_3-alpha_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03475">
        <property type="entry name" value="3-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03473">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="SSF50800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51340">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MOSC" evidence="1">
        <location>
            <begin position="31"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54597.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="227" mass="25691" checksum="B46D53191EB9986D" modified="2015-05-27" version="2">MASIKILSLNVGMPKQIQFNQKDVSTGIFKSATDEYLYLSYLNFEGDGQGDLVHHGGKEKAVCVYPYEHYPFWENELRRPLDYGAFGENLTIKGLLESDVCIGDVFKLGKAIVQVSQPRQPCYKLSIKYGVPDMPLKVQQTGYTGFYFRVLEEGVASKADGLSLLHRHPKAITVSFANRIMHQEKDHIEGIKQILEVEELSVNWRNTFLKRLAGTETDSRERLSGNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF95</accession>
    <name>E3EF95_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">YeaE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yeaE</name>
        <name evidence="5" type="ORF">PPSC2_05260</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369691.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18175"/>
    <dbReference type="EnsemblBacteria" id="ADO55058">
        <property type="protein sequence ID" value="ADO55058"/>
        <property type="gene ID" value="PPSC2_05260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1066"/>
    <dbReference type="eggNOG" id="COG0656">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_3_9"/>
    <dbReference type="OMA" id="QGTWYLG"/>
    <dbReference type="OrthoDB" id="1035565at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000097">
        <property type="entry name" value="AKR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="4">
        <location>
            <begin position="20"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Lowers pKa of active site Tyr" evidence="3">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="287" mass="31948" checksum="777610874D45B885" modified="2011-01-11" version="1">MSQHKKSAITWTDGREVPLIGQGTWNMGEKASLRQEEVRALQLGFELGMTLVDTAEMYAEGGAEEIVGEAIRGRRDNVYLVSKAYPHHADRQGLAQACEASLTRMGTEYVDMYLLHWRGNIPLQETIQGMEKLREQGKIRSWGVSNLDKSDMEELWSLSNGEACAVNQVLYHAASRGIEYDLLPWSRTHGVPVMVYCPIAQGGRLRRGLLDHPVMVDIAASHGVTPSQIALAWVIRDGDVWAIPKAVQESHVRENAAAASIQLTPEQLQQIDEAFPPPTRKQPLDMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFI0</accession>
    <name>E3EFI0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Endonuclease MutS2</fullName>
            <ecNumber evidence="7">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">mutS2</name>
        <name evidence="10" type="ORF">PPSC2_07150</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55471.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905711.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20130"/>
    <dbReference type="EnsemblBacteria" id="ADO55471">
        <property type="protein sequence ID" value="ADO55471"/>
        <property type="gene ID" value="PPSC2_07150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1477"/>
    <dbReference type="eggNOG" id="COG1193">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011252_2_1_9"/>
    <dbReference type="OrthoDB" id="256392at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045910">
        <property type="term" value="P:negative regulation of DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03280">
        <property type="entry name" value="ABC_MutS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00092">
        <property type="entry name" value="MutS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007696">
        <property type="entry name" value="DNA_mismatch_repair_MutS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036187">
        <property type="entry name" value="DNA_mismatch_repair_MutS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005747">
        <property type="entry name" value="MutS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS_family"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002625">
        <property type="entry name" value="Smr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036063">
        <property type="entry name" value="Smr_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="PTHR11361"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361:SF14">
        <property type="entry name" value="PTHR11361:SF14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01713">
        <property type="entry name" value="Smr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005814">
        <property type="entry name" value="MutS_YshD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00534">
        <property type="entry name" value="MUTSac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00533">
        <property type="entry name" value="MUTSd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00463">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160443">
        <property type="entry name" value="SSF160443"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48334">
        <property type="entry name" value="SSF48334"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01069">
        <property type="entry name" value="mutS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00486">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50828">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 7" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Smr" evidence="9">
        <location>
            <begin position="714"/>
            <end position="789"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="522"/>
            <end position="599"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="334"/>
            <end position="341"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55471.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="789" mass="88194" checksum="EC7C1E90A94CBBD6" modified="2015-05-27" version="2">MDSKIFKTLEYQKILNKLSHYAQTATGQQTALRLQPSDDLEHIKKLLKGTDEAYAADRLKGVLSFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQAARRIQVYVTSLHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEVLDSASTELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQDQLITIRGDRFVIPVKAEYRSYFGGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADMLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKGRHPLIPLEQVVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGIINASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEVTEEDQRVEHMIASLEQNRLTAEQEREKAEQLRKEMEALRTRHQTELDKLESQRDRMLEKAEDEARVLVDKARSEAEKIITDLRRLAQEEGASVKEHKLIAARKELDEAEPKQRKKSTAKRSITTRTRSIMAGDEVSVHSLNKKGHVVELTGSKEAIVQLGIMKMKVSLDDLELLQPAQTTAPRVQKPVTGVKRTRDDNVRSELDLRGANVEEALMEVDRFMDEAFLANLGQVYIIHGKGTGVLRTGIQEYLRKHKHVKSYRIGNYNEGGTGVTVAELE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG12</accession>
    <name>E3EG12_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YifB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yifB</name>
        <name evidence="2" type="ORF">PPSC2_09780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370659.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2073"/>
    <dbReference type="EnsemblBacteria" id="ADO56045">
        <property type="protein sequence ID" value="ADO56045"/>
        <property type="gene ID" value="PPSC2_09780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2061"/>
    <dbReference type="HOGENOM" id="CLU_2899951_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000523">
        <property type="entry name" value="Mg_chelatse_chII-like_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01078">
        <property type="entry name" value="Mg_chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mg_chelatase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="6900" checksum="386299A3AE4CC806" modified="2011-01-11" version="1">MEDYSDVLGQLHAKRALVIAAARMHNILLIHKSVKFTVSGSSPIVQLSVILFVLTEFLDLHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG45</accession>
    <name>E3EG45_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Flagellar biosynthetic protein FliR</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fliR</name>
        <name evidence="11" type="ORF">PPSC2_09945</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Role in flagellar biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the FliR/MopE/SpaR family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56078.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599665.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22415"/>
    <dbReference type="EnsemblBacteria" id="ADO56078">
        <property type="protein sequence ID" value="ADO56078"/>
        <property type="gene ID" value="PPSC2_09945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2095"/>
    <dbReference type="eggNOG" id="COG1684">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063626_2_3_9"/>
    <dbReference type="OrthoDB" id="1942709at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006303">
        <property type="entry name" value="FliR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002010">
        <property type="entry name" value="T3SS_IM_R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30065">
        <property type="entry name" value="PTHR30065"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01311">
        <property type="entry name" value="Bac_export_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00953">
        <property type="entry name" value="TYPE3IMRPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01400">
        <property type="entry name" value="fliR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="5 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0966">Cell projection</keyword>
    <keyword evidence="11" id="KW-0969">Cilium</keyword>
    <keyword evidence="11" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="65"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="181"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="210"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56078.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="261" mass="28898" checksum="7EE1E1E6C2D53178" modified="2015-05-27" version="2">MNILLQSFPVFLLIFCRITSFFVVAPIFSTRGVPNIFKVGISGFLALVVYLTYGTHQQVPTDVAYVLLVGREVLIGLLLGFTAYLFMTAIQTAGSFIDLQVGFGMASVFDPMTGASTPLTGNFKFAIAVLFFLSINGHHHLLNAILYSYDWVPLTNDFFIKLYGGSVTEFLVRSFAESFMLAFQIAAPIVVATFLTDVGLGFLAKTAPQFNIFVIGVPLKIIVGLFMLLLLMPSFAFIFERLFSVMFESMRNLLDIMGNRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG96</accession>
    <name>E3EG96_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydgJ</name>
        <name evidence="2" type="ORF">PPSC2_12285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371190.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2617"/>
    <dbReference type="EnsemblBacteria" id="ADO56586">
        <property type="protein sequence ID" value="ADO56586"/>
        <property type="gene ID" value="PPSC2_12285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2605"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_12_1_9"/>
    <dbReference type="OMA" id="MQREFTR"/>
    <dbReference type="OrthoDB" id="1566384at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="15305" checksum="8AA4D627109A316A" modified="2011-01-11" version="1">MDYKASATELFECIVKSRKPVLEERAHFSRGEMGILIALSHQDGVTSGHLSEYLSVSTGRIATALKSLEKKGLVVRRTDANDKRKVIVFITDSGKQFMMDRYNEGVAWSEKILRKLDEQDAKEFIRLIKLIVSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGA5</accession>
    <name>E3EGA5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UDP-N-acetylglucosamine 1-carboxyvinyltransferase</fullName>
            <ecNumber evidence="7">2.5.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Enoylpyruvate transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">UDP-N-acetylglucosamine enolpyruvyl transferase</fullName>
            <shortName evidence="7">EPT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">murA</name>
        <name evidence="9" type="synonym">murZ</name>
        <name evidence="9" type="ORF">PPSC2_00700</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>phosphoenolpyruvate + UDP-N-acetyl-alpha-D-glucosamine = phosphate + UDP-N-acetyl-3-O-(1-carboxyvinyl)-alpha-D-glucosamine</text>
            <dbReference type="Rhea" id="RHEA:18681"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:68483"/>
            <dbReference type="EC" id="2.5.1.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the EPSP synthase family. MurA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.7" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368778.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13690"/>
    <dbReference type="EnsemblBacteria" id="ADO54133">
        <property type="protein sequence ID" value="ADO54133"/>
        <property type="gene ID" value="PPSC2_00700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.141"/>
    <dbReference type="eggNOG" id="COG0766">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027387_0_0_9"/>
    <dbReference type="OMA" id="CRFGQRN"/>
    <dbReference type="OrthoDB" id="537477at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008760">
        <property type="term" value="F:UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019277">
        <property type="term" value="P:UDP-N-acetylgalactosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01555">
        <property type="entry name" value="UdpNAET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00111">
        <property type="entry name" value="MurA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001986">
        <property type="entry name" value="Enolpyruvate_Tfrase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005750">
        <property type="entry name" value="UDP_GlcNAc_COvinyl_MurA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00275">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="SSF55205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01072">
        <property type="entry name" value="murA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 7" id="KW-0132">Cell division</keyword>
    <keyword evidence="3 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="7" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EPSP_synthase" evidence="8">
        <location>
            <begin position="7"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoenolpyruvate binding" evidence="7">
        <location>
            <begin position="22"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-N-acetylglucosamine binding" evidence="7">
        <location>
            <begin position="121"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="304"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="326"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="2-(S-cysteinyl)pyruvic acid O-phosphothioketal" evidence="7">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="44395" checksum="7F84A11A892B4495" modified="2011-01-11" version="1">MEKLMITGGRPLQGTVSISGAKNSAIALIPAAILAESEVILDNLPLLSDVAVYSEILEELGAKVAWEGSQMKIDPSSIKSIPMPNGPVKKLRASYYMMGAMLGRFKEAIIGLPGGCNFEPRPIDQHIKGFEALGATVTNEHGAIHLHAKELRGTKIYLDVSSVGATINIMLAAARAKGATTIENAAKEPEIIDVATLLNSMGAIIKGAGTETIRIEGVSELHGCRHSIIPDRIQAGTYMIAAAATRGNVLIDNVIPKHMEALTAKMQEMGIGIEEYDESIRVLGAPSYGHVDVKALVYPGFPTDLQSPMTSLLTQAQGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGGQLNAAKVKAADLRAGAALVIAGLTVSEGVTEVAGVEYIDRGYDHLVSNLRLLGADVWRQTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB7</accession>
    <name>E3EGB7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glycerol-3-phosphate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">msmX</name>
        <name evidence="6" type="ORF">PPSC2_00815</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368790.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13805"/>
    <dbReference type="EnsemblBacteria" id="ADO54145">
        <property type="protein sequence ID" value="ADO54145"/>
        <property type="gene ID" value="PPSC2_00815"/>
    </dbReference>
    <dbReference type="GeneID" id="66574801"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.151"/>
    <dbReference type="eggNOG" id="COG3842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_1_9"/>
    <dbReference type="OMA" id="PRNMYDK"/>
    <dbReference type="OrthoDB" id="1200451at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040582">
        <property type="entry name" value="OB_MalK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005116">
        <property type="entry name" value="Transp-assoc_OB_typ1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17912">
        <property type="entry name" value="OB_MalK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03459">
        <property type="entry name" value="TOBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="41396" checksum="6E1A75971BF81D99" modified="2011-01-11" version="1">MAGVRLEHIFKKYPGAEKATVVDVNLDIQDKEFLVLVGPSGCGKSTTLRMIAGLEEISDGKLYIGDRVVNDVAPKDRDIAMVFQSYALYPHMNVYQNMAFGLKLRKVKKEEIDKRVREAAKILDIEHLLDRKPKALSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRGQMRAEITKLAKRLETTVIYVTHDQVEAMTMGDRIVVMKDGIIQQAASPDELYNRPVNLFVAGFIGSPTMNFISGKLVEKEGALHFAAPGLDLFVPEGKGQILKAKGYIGKEVILGIRPEDIHEEPVFLEASPNTIFTSTVDVTENLGHEMLLYLSGAGNDTIIARVDGRSNTRDGVKAKLAVDMNKVHIFDKESELSILVGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGC4</accession>
    <name>E3EGC4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">ATP phosphoribosyltransferase regulatory subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">hisZ</name>
        <name evidence="8" type="ORF">PPSC2_00845</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 1/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heteromultimer composed of HisG and HisZ subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="6">This function is generally fulfilled by the C-terminal part of HisG, which is missing in some bacteria such as this one.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368796.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13835"/>
    <dbReference type="EnsemblBacteria" id="ADO54152">
        <property type="protein sequence ID" value="ADO54152"/>
        <property type="gene ID" value="PPSC2_00845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.157"/>
    <dbReference type="eggNOG" id="COG3705">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025113_0_0_9"/>
    <dbReference type="OMA" id="ELVMPPM"/>
    <dbReference type="OrthoDB" id="1236894at2"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00006"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00773">
        <property type="entry name" value="HisRS-like_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00125">
        <property type="entry name" value="HisZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041715">
        <property type="entry name" value="HisRS-like_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004516">
        <property type="entry name" value="HisRS/HisZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004517">
        <property type="entry name" value="HisZ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43707">
        <property type="entry name" value="PTHR43707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13393">
        <property type="entry name" value="tRNA-synt_His"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001549">
        <property type="entry name" value="His-tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00443">
        <property type="entry name" value="hisZ_biosyn_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="7">
        <location>
            <begin position="36"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025246"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="401" mass="44607" checksum="16AFB567EE774574" modified="2011-01-11" version="1">MSKPKGFEIPIGVRDYLPRAVSKLRAIELNVLACMERWGYRQIMTPTMEYYDTVGVASSTSDRKLFKLLNNRGTTLVLRSDMTAPIARVVSSLLKEEEVPLRLSYHANVFRAIEEEAGREAEFFQTGVELVGDDSPEADAEVVALAIASLQAAGVTSFKIAMGHVGFLNGLFEEIIPGRQAEQQALKELLLNRDVVGYRTAIEALGLAPEHRDKLEAILRLRGGKEICEQATRLSVEQQTLQTIAHLCEVWEVLEAYGVSEHVLIDLTMIGDFSYYTGMTFEGYAAEIGFPVCNGGRYDNLLQQFGRSVPATGFALKTNRIVDGVDGIAIETKRPVLIRYDEQERREALSAAAQLRAEGLNVVTGLTGGPEDRRREQQDLYAEVYSYTAEGRQPVQRRELP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGH9</accession>
    <name>E3EGH9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA photolyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">M1-769</name>
        <name evidence="7" type="ORF">PPSC2_03245</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369255.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54618">
        <property type="protein sequence ID" value="ADO54618"/>
        <property type="gene ID" value="PPSC2_03245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.626"/>
    <dbReference type="eggNOG" id="COG1533">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015525_2_2_9"/>
    <dbReference type="OMA" id="CYARLYT"/>
    <dbReference type="OrthoDB" id="979208at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040086">
        <property type="entry name" value="MJ0683-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43432">
        <property type="entry name" value="PTHR43432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01084">
        <property type="entry name" value="Uncharacterised_Radical_SAM_Su"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="6">
        <location>
            <begin position="28"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="32452" checksum="A6A0B5F9AB6FD48E" modified="2011-01-11" version="1">MQIDNTMAKKILSETKGASTVGFTHSLNPFSGCAFGCSYCYVREMPIQKYKDIPWGEWIDIKINAVQNYSKEINSLRRRNKPINIFMSTATDPYQPIERKVEITRKILTEMIESPPDFLQIQTRSPLVVRDLDILLELQQRCGLLVSMTIETDREDVKRLFAPLAPGINLRLKALRNVHAAGIATQASISPLLPFTPDFPKRLQGIVDRIYIDSLNIGDGLKGKRSEQLGMPLLFQRNGFSKWYQPDIHLKTNNYFNKYFDEKIIFLSSSREYPLKGKICTID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGP6</accession>
    <name>E3EGP6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">2-dehydropantoate 2-reductase</fullName>
            <ecNumber evidence="2">1.1.1.169</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Ketopantoate reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ykpB</name>
        <name evidence="5" type="ORF">PPSC2_03550</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(R)-pantoate + NADP(+) = 2-dehydropantoate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:16233"/>
            <dbReference type="ChEBI" id="CHEBI:11561"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15980"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.169"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; (R)-pantothenate biosynthesis; (R)-pantoate from 3-methyl-2-oxobutanoate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the ketopantoate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.169" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369321.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16355"/>
    <dbReference type="EnsemblBacteria" id="ADO54685">
        <property type="protein sequence ID" value="ADO54685"/>
        <property type="gene ID" value="PPSC2_03550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.695"/>
    <dbReference type="eggNOG" id="COG1893">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031468_6_1_9"/>
    <dbReference type="OMA" id="WEKWVFL"/>
    <dbReference type="OrthoDB" id="427052at2"/>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008677">
        <property type="term" value="F:2-dehydropantoate 2-reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003710">
        <property type="entry name" value="ApbA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013752">
        <property type="entry name" value="KPA_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013332">
        <property type="entry name" value="KPR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02558">
        <property type="entry name" value="ApbA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08546">
        <property type="entry name" value="ApbA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00745">
        <property type="entry name" value="apbA_panE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ApbA" evidence="3">
        <location>
            <begin position="4"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="ApbA_C" evidence="4">
        <location>
            <begin position="177"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="33856" checksum="07920A6849E05F28" modified="2011-01-11" version="1">MRFLVVGAGAIGGYFGGRLVQKGEDVTFLVRPSKKLHLAENGLTIQSVHGDFQTPIQAITYGEAAEPFDCIILAVKAYHLPPLRPDLAPYIGKNTMILPLLNGYEHFKSLREYFGAEKVLGGLCSIETTLNHKGSIVQTSPFHRIVFGEWDGENSERAQLLCSHLDHAGFTVTHSHDIQREIWQKYIFIASMSGITTLMGTSVGPILATPESRAIYKRLLHEIVTIARNADMPIHSEMEAHTLKTMDSLKPEMMSSMQRDMQKNLPVEASHLHGALLALASSSNISYPILETVYARLKVYESLLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGV0</accession>
    <name>E3EGV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">exoM</name>
        <name evidence="2" type="ORF">PPSC2_05815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369816.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18780"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55184">
        <property type="protein sequence ID" value="ADO55184"/>
        <property type="gene ID" value="PPSC2_05815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1191"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025996_19_2_9"/>
    <dbReference type="OMA" id="FPEEFDW"/>
    <dbReference type="OrthoDB" id="1445278at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="11"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="34630" checksum="79CDB2DB52A4696C" modified="2011-01-11" version="1">MDAFKRCPAVSVVICTYNRADLLEKTLMSLLKLEDLALAEIIVVDNRSTDHTAATIKRFTVAHGQDIHLRYHYEREQGLSAARNAGITLSKADVIAFLDDDAIPCVTWLQTIMSAFGNNPELTAMGGKIDPKFETERPNWLTGPLELPYTIIDLGKSVREYPAGLNPFGANMAMRKTAFAAVMFPLHLGRKGDILLSGEESWVFEQIRKNGGTIMYHPHMAVEHFVPASRLTREWIMNRYYCQGMSNAAQAAGLRGNAMLMAKVAAKVLYITVDSLLARTEGRKLLNRCRLENIRGTLDTLRNRKSESAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGW1</accession>
    <name>E3EGW1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">manA5</name>
        <name evidence="7" type="ORF">PPSC2_05870</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 26 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369827.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18835"/>
    <dbReference type="CAZy" id="GH26">
        <property type="family name" value="Glycoside Hydrolase Family 26"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55195">
        <property type="protein sequence ID" value="ADO55195"/>
        <property type="gene ID" value="PPSC2_05870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1202"/>
    <dbReference type="eggNOG" id="COG2133">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4124">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018042_0_0_9"/>
    <dbReference type="OMA" id="EMNGDWF"/>
    <dbReference type="OrthoDB" id="669354at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016985">
        <property type="term" value="F:mannan endo-1,4-beta-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006080">
        <property type="term" value="P:substituted mannan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022790">
        <property type="entry name" value="GH26_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000805">
        <property type="entry name" value="Glyco_hydro_26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037524">
        <property type="entry name" value="PA14/GLEYA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011658">
        <property type="entry name" value="PA14_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40079">
        <property type="entry name" value="PTHR40079"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02156">
        <property type="entry name" value="Glyco_hydro_26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07691">
        <property type="entry name" value="PA14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00739">
        <property type="entry name" value="GLHYDRLASE26"/>
    </dbReference>
    <dbReference type="SMART" id="SM00758">
        <property type="entry name" value="PA14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51764">
        <property type="entry name" value="GH26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51820">
        <property type="entry name" value="PA14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GH26" evidence="5">
        <location>
            <begin position="50"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="domain" description="PA14" evidence="6">
        <location>
            <begin position="391"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="533" mass="59962" checksum="4ED075898EDC41B7" modified="2011-01-11" version="1">MRFNFIPLYRLIRHVLPVVILFSLFPVGFGDSLSVVNAASLQPVNSDASTQARELYNYLLSISGKKTVTGQHDYLESPDELSNKVQKISQAYVGLHGYEMGAISGQSDTTEAAQRKNVVDSAIRWSRAGGIVTMTFHEALPGRPLTWANVQAKVSQAEFNKYVTPGTTQYNLFIADLDKVAVSLKQLRDAGVPVLWRPYHEMNGDWFWWGNKNNFNQLWNIMYDRFVNTHQLNNLLWVWSPNAPNSYTVPYTPKYPGDDKVDILAVDIYNNDFKQSHYEGLLGLARNKPIAIGEHGEMPSSEVLQAQPKWVYSMTWGKMLTENNTTNQIQDYMNDSRSLTRDDVKNGLAAIQQPGADVPTLPDEGQSEPIPVPPVVIVPPAPTPPSVPDVVYVNGLRGEYFNNMNVNGSPVLIRTDSKLDYNWRAVAADPKVNADQFSVRWTGKIKPQYSETYTFTTISDDGIRVWVDGKLVIDSWFKQSWTERKGSIALEAGKMVDLKVEYYDEKGDAMARLMWESQHEAKAVVPGNALFLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGX7</accession>
    <name>E3EGX7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lytR3</name>
        <name evidence="3" type="ORF">PPSC2_05945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LytR/CpsA/Psr (LCP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369843.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18910"/>
    <dbReference type="EnsemblBacteria" id="ADO55211">
        <property type="protein sequence ID" value="ADO55211"/>
        <property type="gene ID" value="PPSC2_05945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1217"/>
    <dbReference type="eggNOG" id="COG1316">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016455_2_2_9"/>
    <dbReference type="OMA" id="LLGYKDC"/>
    <dbReference type="OrthoDB" id="491753at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004474">
        <property type="entry name" value="LytR_CpsA_psr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03816">
        <property type="entry name" value="LytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00350">
        <property type="entry name" value="lytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LytR_cpsA_psr" evidence="2">
        <location>
            <begin position="97"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="35958" checksum="49DBE354592BE61A" modified="2011-01-11" version="1">MKRWLKMTLGTVALLVVGGAAYTVYVYHSFKTAADAMYHPRSIVQPGVVSTLATGGAGRSAGTNTGTSTPNPAAISQFKPFTVLVLGVDRRPHDPGRSDTMIVLSMNPAKGSMLMFNIPRDTRTELIGRGREDKINHAFAFGGVDMSIRTVEHFLNHPIDYYVQMNMEGFAKMVDLVGGVEVYNPLDFQYEGHHFAQGNLNLNGAEALAYARMRFDDPRGDLGRNARQRELLKQILAQSISKEGLLRVKPLLEAAGEQIRTDITFDDMTTFLTRIGPSLKQMDTVEVKGHGSKINGVYYYIVDEQERQRIHGVLEKHLVTTSASP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGZ7</accession>
    <name>E3EGZ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ywdK</name>
        <name evidence="7" type="ORF">PPSC2_07560</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0382 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55557.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599585.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1580"/>
    <dbReference type="EnsemblBacteria" id="ADO55557">
        <property type="protein sequence ID" value="ADO55557"/>
        <property type="gene ID" value="PPSC2_07560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1562"/>
    <dbReference type="eggNOG" id="COG2363">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096548_3_3_9"/>
    <dbReference type="OrthoDB" id="1985942at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006696">
        <property type="entry name" value="DUF423"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43461">
        <property type="entry name" value="PTHR43461"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04241">
        <property type="entry name" value="DUF423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55557.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="13641" checksum="90ACF497314EFB6A" modified="2015-05-27" version="2">MQRRWIMVGSIMMMLAVAIGAFGAHIVKARIDADALAVYETGVKYHMIHAVGLLIIALAAGQWGPSTRLRWAARLLFTGIILFSGSLYVLSLTGIRVLGAITPLGGVCFIAGWIFLAWAAAGLKKED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH08</accession>
    <name>E3EH08_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Arabinose ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PPSC2_07605</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370195.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1591"/>
    <dbReference type="EnsemblBacteria" id="ADO55568">
        <property type="protein sequence ID" value="ADO55568"/>
        <property type="gene ID" value="PPSC2_07605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1572"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_61_0_9"/>
    <dbReference type="OMA" id="MGQFTLF"/>
    <dbReference type="OrthoDB" id="1384345at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="103"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="136"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="162"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="205"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="271"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="294"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="329"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="358"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="8"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="391" mass="43010" checksum="539BAF1CFC1DA904" modified="2011-01-11" version="1">MKKVNPLLIIILALGVFGIITTEMGIIGVLPQVTQKFNVSASQAGWLVSIFSLVVAISGPFLTLLVSGMNRKVILLIAVFSFVISNIVYVYTTHFEVMLIFRVLPAIFHPVFFSVALVTASHLVPPEKSSKAVTKVFAGITVGFAFGVPLTSYLAEKIALEAAFWFGAVVSMIAFVGILIWLPSLPVQQKMSYGKQLGILRKPQLWFNIVSVIFIFAAMFSVYSYFAEYLGEITLMNGSWISMMLMVFGIVMIFGNFLFGGLLHKNLIKTVIMFPLLYMVVYVFTYALGTSFLAMIVVVLIWGTVHSGGLIISQTWLTTEANEAPEFGNSLFVSFSNLGITIGSAIGGWFISHLGIHQLIWSGMMFALLAFLSMIIKIKLFNSNAAEVNVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH66</accession>
    <name>E3EH66_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_08895</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TMEM19 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370475.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21360"/>
    <dbReference type="EnsemblBacteria" id="ADO55857">
        <property type="protein sequence ID" value="ADO55857"/>
        <property type="gene ID" value="PPSC2_08895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1875"/>
    <dbReference type="eggNOG" id="COG1836">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036918_2_1_9"/>
    <dbReference type="OMA" id="VISPWRW"/>
    <dbReference type="OrthoDB" id="737126at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002794">
        <property type="entry name" value="DUF92_TMEM19"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13353">
        <property type="entry name" value="PTHR13353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01940">
        <property type="entry name" value="DUF92"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="152"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="187"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="248"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="28326" checksum="7914C6DCE16603DA" modified="2011-01-11" version="1">MDWIIGLLSAAVVAGAAFYKKSLTLSGFAAAVLMGTVYYGAGNLFWFGTLLLFFITSTLLSRFKKERKAELEKSYAKTGNRDAGQVWANGGLGMLLCLGYAIWPHVAWQLAFVGVMATVTSDTWATEFGSLSRKPPRSVLTGKVLAPGTSGGVSVLGTAAALAGGILIGIGAWGFGHAVGMPELPLWLWALIGGISGSAGAFADSYLGATVQLMRSCPVCKREVEVDTHCGQTTVYIRGWHWMSNDRVNSISSIFGGLVALAGIFFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH97</accession>
    <name>E3EH97_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ferredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fer</name>
        <name evidence="6" type="ORF">PPSC2_09050</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309730.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21520"/>
    <dbReference type="EnsemblBacteria" id="ADO55888">
        <property type="protein sequence ID" value="ADO55888"/>
        <property type="gene ID" value="PPSC2_09050"/>
    </dbReference>
    <dbReference type="GeneID" id="66578128"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1906"/>
    <dbReference type="eggNOG" id="COG1141">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_139698_6_4_9"/>
    <dbReference type="OMA" id="EDMIDAQ"/>
    <dbReference type="OrthoDB" id="1873445at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001080">
        <property type="entry name" value="3Fe4S_ferredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00352">
        <property type="entry name" value="3FE4SFRDOXIN"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2 4" id="KW-0408">Iron</keyword>
    <keyword evidence="3 4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="3"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU368020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="8621" checksum="CBA9EAF015AC9B85" modified="2011-01-11" version="1">MAKYTWVEKDTCIACGACGATAPDIYDYDDEGLAEVIFEGDANQGIKAISEDLFDDMQDACDGCPTDSIKVADEPFNKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHB4</accession>
    <name>E3EHB4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gamma-carboxymuconolactone decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yurZ</name>
        <name evidence="2" type="ORF">PPSC2_09125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370522.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21595"/>
    <dbReference type="EnsemblBacteria" id="ADO55905">
        <property type="protein sequence ID" value="ADO55905"/>
        <property type="gene ID" value="PPSC2_09125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1923"/>
    <dbReference type="eggNOG" id="COG0599">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137228_1_1_9"/>
    <dbReference type="OMA" id="NAFTEAC"/>
    <dbReference type="OrthoDB" id="1925754at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004675">
        <property type="entry name" value="AhpD_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00778">
        <property type="entry name" value="ahpD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="23"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="11865" checksum="4DBB0C35F52696C9" modified="2011-01-11" version="1">MTVMDEKVHAYKDQISHLEDKLPEVVHAYHRFTGECFQAGSLDEKTKQLIALGIGLFANNEVCTFYHVNEARSKGASDQEIMEAVAVAAAVGGGHALSQGVTRVQKALH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHR9</accession>
    <name>E3EHR9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_11080</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370937.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23470"/>
    <dbReference type="EnsemblBacteria" id="ADO56331">
        <property type="protein sequence ID" value="ADO56331"/>
        <property type="gene ID" value="PPSC2_11080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2348"/>
    <dbReference type="eggNOG" id="ENOG502Z8TH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009413_0_0_9"/>
    <dbReference type="OMA" id="QMYTRER"/>
    <dbReference type="OrthoDB" id="21860at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045401">
        <property type="entry name" value="GAP1-M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045402">
        <property type="entry name" value="GAP1-N2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20014">
        <property type="entry name" value="GAP1-M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20013">
        <property type="entry name" value="GAP1-N2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GAP1-N2" evidence="2">
        <location>
            <begin position="8"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="GAP1-M" evidence="3">
        <location>
            <begin position="161"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="870"/>
            <end position="969"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="870"/>
            <end position="964"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF20014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1009" mass="112314" checksum="1816FF159F708852" modified="2011-01-11" version="1">MSLSTSHMIQQQMYTRERRGIFRSTEGFDTVANSKGLDASFIKKVLHPLCVYDAPAALTARGEKQESVYPEALHLVRTESGGVVLGRSIYKAADFTGLRSAFFTHNYVIPAGHGESPSDYKQWLNTSFADTYDIEQGTELPELERLPGGSVFPAVDPSAVLAQLQLSEEVFKQLLYAVMMSAAGRKKVYVALNVPAEAVASSAKQLLGVLYAALPYAFRNRLGFLTYAQEPNSRKGIHLMFVEPFSLRPGDRNVEKDFVFDLSNNSRILNVDTEQAKQPYFDWIVRTLLNGEAPDDFLKFAEQMLTGMEAGRELTPSSYHELITLYRIEQGERSLYNEQRITVLRSLTDYLSPSDALPRKMRLNDLFLSFFDHEFDRVKDGHIPDVGLVDCFKDYYKVHARSSENRLVEYLIRSLNNAYTARNTEAVTYIYHTIEENPSLGKVYFTKVLGNPALTKMLFIPYMDSQMKRTPDVKGLLAVVHEWGSRYIEVSANADFQLLAESALMGKLRAERKPVEAVAAIHQRFRQWDSSSAVGTLSPLQQSGLTERLREASDRYLLTEVELKEISPDQVVQIPFFTRPDLVQWVGKLPVPLKGQAVRLIAAYDWFNTEDPEPSVLDGLEPSEVEKVQDWAYGWLPQQLAEGHFARLLPAFYRSDGTGEGILDFARLVSSIRKWAKDNDTMYRFIRWSEEHAEFATPRGGFEPAYRRALLLFFQKEGREGLHKKTLWRQYFEPAKPVFKNFYQAAKRETDTPLVKTLRRFRKGGVISGIVLIVIAGTLGGLKATGIIGSVDTPTPAAAPKPVQQPVEPTVPVKEEPAAIVTHVPNTKSTTKMVKLLFAFQTSAEQAEFKPKKLVIVGADQQEHSYENFTLTEQNDKRAASKANNGSSGDVNTEGATTKSKTGAGESTGSGSTDLSGTSSGKSADQTGAVTDNTAGGATSKISTEGSGIATDQTITSTSDDGTGTTEYDLDKYPYRTLLTIWQRLELNDASTVTVDGKDYPLVQVKAAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHU5</accession>
    <name>E3EHU5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphoesterase</fullName>
            <ecNumber evidence="3">3.1.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfcE</name>
        <name evidence="5" type="ORF">PPSC2_11595</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the metallophosphoesterase superfamily. YfcE family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371042.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23965"/>
    <dbReference type="EnsemblBacteria" id="ADO56437">
        <property type="protein sequence ID" value="ADO56437"/>
        <property type="gene ID" value="PPSC2_11595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2452"/>
    <dbReference type="eggNOG" id="COG0622">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063749_1_1_9"/>
    <dbReference type="OMA" id="DILYHGP"/>
    <dbReference type="OrthoDB" id="1355703at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00841">
        <property type="entry name" value="MPP_YfcE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024654">
        <property type="entry name" value="Calcineurin-like_PHP_lpxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041802">
        <property type="entry name" value="MPP_YfcE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000979">
        <property type="entry name" value="Phosphodiesterase_MJ0936/Vps29"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11124">
        <property type="entry name" value="PTHR11124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12850">
        <property type="entry name" value="Metallophos_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00040">
        <property type="entry name" value="yfcE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos_2" evidence="4">
        <location>
            <begin position="1"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="20418" checksum="C83263667B2DB1C2" modified="2011-01-11" version="1">MKLMFISDIHGSLYWLQLALEKFKEEKADRIVLLGDYMYHGPRNPLPEGYNPAEVAAMLNQYKSHIAVSVRGNCDAEVDQMLLEFPMMGDYALLYHEGRRIYVTHGHGFSIGNLPPLEAGDVFIQGHTHIPVADVENGVFVLNPGSIALPKENYPSSYGVLEGAQFTVKDFDGSTVKTITFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHV8</accession>
    <name>E3EHV8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phnB7</name>
        <name evidence="2" type="ORF">PPSC2_11655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371055.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24030"/>
    <dbReference type="EnsemblBacteria" id="ADO56450">
        <property type="protein sequence ID" value="ADO56450"/>
        <property type="gene ID" value="PPSC2_11655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2465"/>
    <dbReference type="eggNOG" id="COG2764">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046006_17_3_9"/>
    <dbReference type="OMA" id="WGDYFGS"/>
    <dbReference type="OrthoDB" id="2051456at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06588">
        <property type="entry name" value="PhnB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028973">
        <property type="entry name" value="PhnB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06983">
        <property type="entry name" value="3-dmu-9_3-mt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3-dmu-9_3-mt" evidence="1">
        <location>
            <begin position="6"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16111" checksum="4DDB515478B32C5D" modified="2011-01-11" version="1">MSVDVYLNFNGNCREAAEFYAEAFGTEKPKIMTFGEAPPNPDYPLPEEAKNLVMHTRLQIDGSNVMFSDVFPGMPFVAGNNISLAIVNKDEEKIRSYFHKLKEGGTVNMELQETFWSKCYGSLKDRFGIEWQLSYDNGMTDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHX6</accession>
    <name>E3EHX6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Methyltransferase type 12</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2497"/>
    <dbReference type="EnsemblBacteria" id="ADO56468">
        <property type="protein sequence ID" value="ADO56468"/>
        <property type="gene ID" value="PPSC2_11730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2482"/>
    <dbReference type="eggNOG" id="COG0500">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069129_7_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="19239" checksum="B7FA85EAF9A4E9C6" modified="2011-01-11" version="1">MDFIEADARTFDSEKRFSMIYLTGNAFQAFLSDEDQRALLETVYKHLESNGMFIFETRNPLGNDLSNQEESIWGNFIDKDGIKVKVTGTQSYDSSNQIMHWVTFRDWGSEKTTSRIACRFTDNDTLQRLLTSRGFFFENQYSNWDKTPFTPLSPSIISVCRKKHGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI26</accession>
    <name>E3EI26_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_03595</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369330.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16410"/>
    <dbReference type="EnsemblBacteria" id="ADO54694">
        <property type="protein sequence ID" value="ADO54694"/>
        <property type="gene ID" value="PPSC2_03595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.704"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_1_9"/>
    <dbReference type="OMA" id="ITSNDEY"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="298"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="321"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="394"/>
            <end position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="599" mass="67509" checksum="4AFAC36AC73913B5" modified="2011-01-11" version="1">MPTRAVRWFRALTAPYRSSIQLKLILTMIVLSVLPVIAVTVLAAEKSRASMETEVVETNMSNMKWTGIYISDQLDRLNHLIYSIQISPDLSDYLNEREPDNLSSQFNAQRKMLNTLANVYYSAGSHVIGIQLYLKQSQTLFTFNSMQNEITTVSGIPSQYAEMWQANKDYSIRSSPADPDRFTLTRSIRRFEDQKQTGAISLEVLWSQFDQTLGLLGRGDQHQVLITDGDGRVMYPAQARQSPPPPGVLTALRDVKPGPGMLQTAEHYVFYNDLDVVGLKLVKIIPTSSINHSAFSTMLYGIVVGVISILVSICIAVFIAWRTARPIVHLARSVQELDMIKGPAGEPSTRPDEIGLLERSLHGMAGRIREHIQTEYSINLQKKTAELKALQAQIHPHFLQNTLQMIGSMVFSQKPEDTYEVIRSLSEMFRYVVREPQDMASLRAELDHVGHYMRIQQRRFPQRLVFQVETEEQAMDIRLPKLSLQPLLENAFQHGLDRKAGAWRMAIRVEIMKEEVCITVSDNGNGMPPDKLEKVRAKLENASEEPIWAQGSHIGLSNVASRIQMNFGVHYGVTIDSEQGVGTCVTIRIPFISAEEGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI57</accession>
    <name>E3EI57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GAF domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yebR</name>
        <name evidence="2" type="ORF">PPSC2_03735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369361.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16550"/>
    <dbReference type="EnsemblBacteria" id="ADO54725">
        <property type="protein sequence ID" value="ADO54725"/>
        <property type="gene ID" value="PPSC2_03735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.735"/>
    <dbReference type="eggNOG" id="COG1956">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077738_2_0_9"/>
    <dbReference type="OMA" id="DNYIACS"/>
    <dbReference type="OrthoDB" id="1739746at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000614">
        <property type="entry name" value="FRMsr_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01320">
        <property type="entry name" value="UPF0067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GAF" evidence="1">
        <location>
            <begin position="31"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="17464" checksum="4B7128D1622A5ACD" modified="2011-01-11" version="1">MFQTIPYEGTRQEQFESVLGQLRALVHDESNRIANLANASALLGHFLPDVNWSGFYLYDGTELVLGPFQGLPACIRIPLGRGVCGTAAAERRTLVIDDVHAFPGHIACDAASNSEIVIPLIKNDELIGVLDIDSPLKSRFDHEDRVFLEEFTAILVSSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI94</accession>
    <name>E3EI94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yndE9</name>
        <name evidence="7" type="ORF">PPSC2_03890</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369398.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0779"/>
    <dbReference type="EnsemblBacteria" id="ADO54762">
        <property type="protein sequence ID" value="ADO54762"/>
        <property type="gene ID" value="PPSC2_03890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.770"/>
    <dbReference type="eggNOG" id="COG3949">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_0_2_9"/>
    <dbReference type="OMA" id="IIFATAD"/>
    <dbReference type="OrthoDB" id="1560485at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="128"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="153"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="226"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="276"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="308"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="339"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="373" mass="42016" checksum="A444D1B92AAE29C1" modified="2011-01-11" version="1">MPNTPSMKQDEISTIQALLTVTSTVYAVGIVSLPRTITEQTQTPDVWQGLLLASLFGVGVVFINVKLCRRFPGKTFYELNSVIAGKFISLFINIAFMVYCVMICSLVSRMMAEFLKALALERTPVSMILLPFLLLIGYLTSGGLHAMVRLVELFFPLTFIVYLLLIILNINHFDIDNLRPVFHQGWGPILKSLKVVPFSTLGFESMLILTNFMVNPQKAWKAGGIGYSIAMALYVMMVTMVVGCMSVEEVSQLQWPVVSFAQQIEFPGAFLERFEIFFIILWTIKIFMTASNYYFYLVAGISQLTQKWNGYIFYLPLIIIFAVSIYPQNFIQIDNFGTVTGYFGMIICAAVPLVLLLISMIFCIRGNLDGKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIE6</accession>
    <name>E3EIE6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rhaS6</name>
        <name evidence="4" type="ORF">PPSC2_06155</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55259.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885900.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19115"/>
    <dbReference type="EnsemblBacteria" id="ADO55259">
        <property type="protein sequence ID" value="ADO55259"/>
        <property type="gene ID" value="PPSC2_06155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1267"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="185"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55259.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="34231" checksum="9A483774CF1025D7" modified="2015-05-27" version="2">MEYKYELVQADNHFPLKIIVHSSNEPAYIPRHWHDSIEISYVLSGRIDNIYIDGMNYSSQEGDIVLINSNAIHSFSVAKGKGREAITVLIPSGFIRENTKDSNPISFDCISIFETNEQRLQHFKELRDLLNTLFVAYLNQHNDPLVHIHLTSLSYKLVYLLLMHFKIDNESISGFNTHKYLERLTLITDYIKENYDQSLSLDSIAQVFGLSPEYLSRFFVKHVGMTLFQYINAIRLEKSFRVLMNTDHSIIQIALEHGFPNEKSFARVFKKVYQATPHQYRKKHKRRSKARSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIP7</accession>
    <name>E3EIP7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">5'-nucleotidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yunD</name>
        <name evidence="4" type="ORF">PPSC2_08090</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370308.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20720"/>
    <dbReference type="EnsemblBacteria" id="ADO55685">
        <property type="protein sequence ID" value="ADO55685"/>
        <property type="gene ID" value="PPSC2_08090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1702"/>
    <dbReference type="eggNOG" id="COG0737">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005854_8_1_9"/>
    <dbReference type="OMA" id="GDIHRIC"/>
    <dbReference type="OrthoDB" id="1884225at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008252">
        <property type="term" value="F:nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006146">
        <property type="entry name" value="5'-Nucleotdase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00785">
        <property type="entry name" value="5_NUCLEOTIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="9"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="domain" description="5_nucleotid_C" evidence="3">
        <location>
            <begin position="281"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU362119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="484" mass="52875" checksum="F521432BA5D2ACFE" modified="2011-01-11" version="1">MEMTTRQTLTILHTNDIHSHFGSMPSIAAMINERRAASGDALLVLDIGDHMDRMAPETEGTLGGANVDVINLTGYDAITIGNNEGLTFTSDMIEQAYAGIHCPVVCGNLTERATGRIPSWMKESVILNKAGIKIGLLGVTAPFTEFYQLLGWDVLDPFEVLGTQIAALRKQVDVVVVMSHLGLPSDEKLASQFPEIDVILGGHTHHVLEEPLRIGNTVLCGAGKFGTLLGEVTLTRNHSLEPFRVTSGGVVPMDQTLLDEKVASAIVLHRRQAERAMESTVAVTDRELEIAYNEESPFGNLLAQSVSHFTGTEIALVNAGQLLGPLPQGDISKGILHSLCPSPINPCVMKLRGRDIRLALEQSLLPEFTDKPMSGFGFRGKVLGTMCVEGLTIQFDPDRAPYEKVTDIRVAGQPLEEDEEYTVGTLDMFTFKAGYKVLANGTDLRFMLPEFLRDLIEMELKRPGAMEECFAARWLQVSKQSGED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIQ6</accession>
    <name>E3EIQ6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fructosamine deglycase</fullName>
            <ecNumber evidence="1">3.5.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">frlB3</name>
        <name evidence="3" type="ORF">PPSC2_08130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the conversion of a range of fructosamine 6-phosphates to glucose 6-phosphate and a free amino acid.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homooctamer.</text>
    </comment>
    <dbReference type="EC" id="3.5.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370317.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1720"/>
    <dbReference type="EnsemblBacteria" id="ADO55694">
        <property type="protein sequence ID" value="ADO55694"/>
        <property type="gene ID" value="PPSC2_08130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1710"/>
    <dbReference type="eggNOG" id="COG2222">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012520_3_0_9"/>
    <dbReference type="OMA" id="ESICIFM"/>
    <dbReference type="OrthoDB" id="1046291at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05710">
        <property type="entry name" value="SIS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035488">
        <property type="entry name" value="FrlB_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024713">
        <property type="entry name" value="Fructosamine_deglycase_FrlB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009290">
        <property type="entry name" value="FrlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="11"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR009290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="36365" checksum="873A09982ADEBE65" modified="2011-01-11" version="1">MEIKKIIEEILANKQEAGGIKQVYYVACGGSYGAFYPAKTFLEKEAKEVKVGLYTSNEFVHNTPRAFGENSVLVVASHKGNTPETVKAAELGKTAGVPVIALTWVEDSPITEQADYVVKYTFGDGKDIAREKTMKALMTAVEVLNQTEGYEHYEKFLDGVGKIDRIVKNACKHVEKRALAFAKNHKDDSVIYTMASGAGYGAAYMQSICIFMEMQWINSSSIHSGEYFHGPFEITDAEIPFVIQVSEGSTRPLDERALKFLNRYTKRVEVLDAKDLGLSTIDSSVVDYFNHSLFNNVYPVYNQALAIERAHPLTTRRYMWKVEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJI7</accession>
    <name>E3EJI7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADPH dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqjM1</name>
        <name evidence="2" type="ORF">PPSC2_12070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371141.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2567"/>
    <dbReference type="EnsemblBacteria" id="ADO56537">
        <property type="protein sequence ID" value="ADO56537"/>
        <property type="gene ID" value="PPSC2_12070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2553"/>
    <dbReference type="eggNOG" id="COG1902">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012153_2_1_9"/>
    <dbReference type="OMA" id="TEWMEYT"/>
    <dbReference type="OrthoDB" id="1033671at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003959">
        <property type="term" value="F:NADPH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02932">
        <property type="entry name" value="OYE_YqiM_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044152">
        <property type="entry name" value="YqjM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43303">
        <property type="entry name" value="PTHR43303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="3"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="37451" checksum="9B3C86529D1726D3" modified="2011-01-11" version="1">MKDLFSAYKFKGLELKNRVVMPPMCQYSVEKKDGIATDWHFMHYVSRAIGGTGFIIIEMTDVEPDGRISDFDLGLWSDEQIPALKRIVDACHSYGAKVGIQIAHAGRKAEDAEVPVAPSAIPFDEKSKLPRALSTQEVKEMVEKFRGAVARAVKAGVDAIELHGAHGYLIHQFHSPLTNQRDDEYGKDLTKFGREIIQAAKAEMPEDMPLIMRISAKEYVEGGYDIQESISFAKEYQQAGVDIFDISSGGEGPIAAWGRPGSHAAYQVTLAREIRQALEVPVIAVGRLDDPILANAVVGNEDADLVAVGRGMLRNPYWALEAATNLKKETTIPKQYTTGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKA5</accession>
    <name>E3EKA5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385846.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0038"/>
    <dbReference type="EnsemblBacteria" id="ADO59432">
        <property type="protein sequence ID" value="ADO59432"/>
        <property type="gene ID" value="PPSC2_27900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5912"/>
    <dbReference type="HOGENOM" id="CLU_1057054_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="31226" checksum="63BD2A9DACABE84A" modified="2011-01-11" version="1">MTKPYANKYILGSAPKHIAKEDVLQYFFYAFELSWSMPMFIDHKDKIMSYFTQEIEKELLSFEDLSIEQTWWLCVFIAMREINKYYSSEFAVQTLNQLIRRIQHLEEGSLCRYANIFQAIMLEEHPEVLAIRPLELHALNNIFAESDRLLEFFIVNKTRIIAMLKRHLIQQDLNHVYLNSVLMNDRRVLRKFSNIWNSFYELFIHFFIAVYDYKLSPMHMGKEELKNAIGDLVLIFLVNGVSNKGKIDELHDELSLIIQNVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKH1</accession>
    <name>E3EKH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Polymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_26150</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="8 9">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
            <plasmid evidence="8 9">pSC2</plasmid>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="E3EKH1"/>
    <dbReference type="STRING" id="886882.PPSC2_p0413"/>
    <dbReference type="EnsemblBacteria" id="ADO59803">
        <property type="protein sequence ID" value="ADO59803"/>
        <property type="gene ID" value="PPSC2_26150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5506"/>
    <dbReference type="eggNOG" id="COG3831">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_591541_0_0_9"/>
    <dbReference type="OrthoDB" id="983227at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003950">
        <property type="term" value="F:NAD+ ADP-ribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006471">
        <property type="term" value="P:protein ADP-ribosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.142.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012317">
        <property type="entry name" value="Poly(ADP-ribose)pol_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004102">
        <property type="entry name" value="Poly(ADP-ribose)pol_reg_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036616">
        <property type="entry name" value="Poly(ADP-ribose)pol_reg_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036930">
        <property type="entry name" value="WGR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008893">
        <property type="entry name" value="WGR_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00644">
        <property type="entry name" value="PARP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02877">
        <property type="entry name" value="PARP_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05406">
        <property type="entry name" value="WGR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142921">
        <property type="entry name" value="SSF142921"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47587">
        <property type="entry name" value="SSF47587"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51060">
        <property type="entry name" value="PARP_ALPHA_HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51059">
        <property type="entry name" value="PARP_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-0614">Plasmid</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PARP alpha-helical" evidence="7">
        <location>
            <begin position="116"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="PARP catalytic" evidence="6">
        <location>
            <begin position="240"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="239"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="435" mass="49667" checksum="07BBBDC6C57E637E" modified="2011-01-11" version="1">MATKAKAIRLSNSSSPNFNTVKSWDRNVLNCADLSANSNKFFIMEKQEGKGDYPYRIYTEYGRMGKPNPTKEGRYYHSEYEMDSDYDSLYNEKKRKYKDIIVDDVGSSAPTQVDVKCKTKKENLSEVKDKVLKLIGKLYQNATSYLVKSIDTPLGKLSATQVAKGLEILTQIEHMLDRGTTTGMEVERLSNEFYSYIPVTFGSRVDYRRFIIDDYVKLNDRKDLLGVMSSVVQAQSTLEQNLEQKYKSLKIKLQALSSRSKEYKRLSDFVQSSKGHNHHFGFDIKEIFEVQDMVNHDRFNPKKVEIMELFHGSRNENILSIMQNGLKIKPASAVHTGSMFGGGIYFASQSTKSANYCWGFNGGVASDENYLFVCEVATGKIKDYTYAQPHLTAAPRPYNSVRGVKSPGGLIHDEYIIYNENQVKIKYIIEFKKTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKJ1</accession>
    <name>E3EKJ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
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    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386237.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0433"/>
    <dbReference type="EnsemblBacteria" id="ADO59823">
        <property type="protein sequence ID" value="ADO59823"/>
        <property type="gene ID" value="PPSC2_26065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5484"/>
    <dbReference type="eggNOG" id="ENOG5032IT4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1915004_0_0_9"/>
    <dbReference type="OMA" id="NTGFHYT"/>
    <dbReference type="OrthoDB" id="2070332at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="14774" checksum="4E94C11CD197EDDA" modified="2011-01-11" version="1">MTPFFSSILTYCIQAIAVLLIIFNVLKRNKRKIGWGSLSLLLALLGVAVSFKFGNYILGDYLFSLVGLPAWSNNVNNTGFHYTLFLSIIFFIPSLIFGSKNPEDFGAKIGKWISSIYLILIIIMFIFFMIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL92</accession>
    <name>E3EL92_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59924.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886317.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0535"/>
    <dbReference type="EnsemblBacteria" id="ADO59924">
        <property type="protein sequence ID" value="ADO59924"/>
        <property type="gene ID" value="PPSC2_28550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6058"/>
    <dbReference type="HOGENOM" id="CLU_209151_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59924.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="7192" checksum="64C608CC38857127" modified="2015-05-27" version="2">MEYEEVLEGENKVLDEVFSEFSKVFSRGVRWDIFEEDGEFVLGLIDFETSQVLIIGREEEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELA6</accession>
    <name>E3ELA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59938">
        <property type="protein sequence ID" value="ADO59938"/>
        <property type="gene ID" value="PPSC2_28490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6044"/>
    <dbReference type="eggNOG" id="ENOG50308BN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1609219_0_0_9"/>
    <dbReference type="OMA" id="VESEPHH"/>
    <dbReference type="OrthoDB" id="1772456at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045397">
        <property type="entry name" value="DUF6516"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20126">
        <property type="entry name" value="DUF6516"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="19659" checksum="9DE8B5F9CD978435" modified="2011-01-11" version="1">MAENDHNPLLYPADISEILEEFGHLLAVYDKLKDRSSIFASYIRTNKRLEVKEHPIHGITGLVVTEKYDEAGYIERYCYTWRRLLPKQGIQTGHITSWGNDHHDAIWTPAAYRVTTEPHHHHYDPADRKKRRENYNVRTLRQAFTFVGAYIESGREYTAETIETLDSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELE4</accession>
    <name>E3ELE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386390.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0587"/>
    <dbReference type="EnsemblBacteria" id="ADO59976">
        <property type="protein sequence ID" value="ADO59976"/>
        <property type="gene ID" value="PPSC2_28300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6001"/>
    <dbReference type="HOGENOM" id="CLU_1097721_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
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        <location>
            <begin position="58"/>
            <end position="76"/>
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            <begin position="82"/>
            <end position="100"/>
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            <end position="158"/>
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    <feature type="transmembrane region" description="Helical" evidence="1">
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            <end position="183"/>
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            <end position="209"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="1">
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            <begin position="215"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO59976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="29135" checksum="CBB77FE3F4FF6E82" modified="2011-01-11" version="1">MKKDFHDRVTNRLKPVSDQPMYQFFGEEVSAQADKANVRQEIEETVVRVLDHSRMQKAGYWLMVGVLSILLTLFVIKTNLPATVGSIMMIFLYLMGVRRIPFSYDTDINFYLANATVTLKAMFQHFSITSKLIKHADKILFVSVTAMLIEHLALRWFLFAPISSTIYTVGFYGMWLGCVLCFANRDTSKAYRGFALAYIYHLIVILFNGLFNNDLYIFTVVSAFVIWTIAGWMKKCAIEDIQITRKSENQVNQ</sequence>
</entry>
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                <person name="Wang C."/>
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                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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        </source>
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    </dbReference>
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        <source>
            <dbReference type="EMBL" id="AKA44235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="7781" checksum="FC0198D707D8B609" modified="2015-05-27" version="1">MLASLQGKEVTIHFIDGTNVCDGILDQIDDKFVKYLTQYQTFVIPITSIRTVSIDIKERQRHRVGFAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBX0</accession>
    <name>A0A0D5ZBX0_PAEPS</name>
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            <fullName evidence="2">Integrase_SAM-like_N domain-containing protein</fullName>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
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                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <location>
            <begin position="16"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="143" mass="16358" checksum="0E097B7509206156" modified="2015-05-27" version="1">MLSAFMLIPCCMIENEWVPKHAVIELKNGTTLESHCSKINNHVLPKIGHMPIDEITIMILVKLFADMRKPGVRVDKKDKKSPLASRTIQYAYDVTNSIFQRATEWRVLIKNPLGGVNVHKLAKRIKRPGKTAKITLKKMRQSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCA5</accession>
    <name>A0A0D5ZCA5_PAEPS</name>
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    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <property type="gene ID" value="PPSC2_07875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1647"/>
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    </dbReference>
    <dbReference type="GO" id="GO:0016021">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
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            <begin position="40"/>
            <end position="60"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10325" checksum="181FD1BC35502230" modified="2015-05-27" version="1">MIYWLFPKLNPLLPTFLLCPILAILIGVCFAYFKGNIYLGLILALLLPLIFIATNLKTIAVNIDAWILHGFIYAIITFVAYKMAFSQLGKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCI3</accession>
    <name>A0A0D5ZCI3_PAEPS</name>
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    </gene>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
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            </authorList>
            <dbReference type="PubMed" id="21037012"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3697"/>
    <dbReference type="HOGENOM" id="CLU_2233876_0_0_9"/>
    <dbReference type="OrthoDB" id="2134649at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="12070" checksum="5A5706E0F27D02E0" modified="2015-05-27" version="1">MWKSINDWVGMIERTREILKNTQSVSEIARGLGRSNNTVYKIMGYLNKNKLLSRELSKKFGPTRTCSSDLVQIFRGLLNWEGKLGLLQNSRAILGWNINVLLLFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCP0</accession>
    <name>A0A0D5ZCP0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flagellar protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvyF</name>
        <name evidence="2" type="ORF">PPSC2_23070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324805.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10555"/>
    <dbReference type="EnsemblBacteria" id="AKA44322">
        <property type="protein sequence ID" value="AKA44322"/>
        <property type="gene ID" value="PPSC2_23070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4886"/>
    <dbReference type="eggNOG" id="ENOG5032TKA">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137779_1_0_9"/>
    <dbReference type="OrthoDB" id="1893485at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022258">
        <property type="entry name" value="Flagellar_operon_YvyF"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03826">
        <property type="entry name" value="YvyF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="112"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="136" mass="15304" checksum="9F6ADEA3C6A631CE" modified="2015-05-27" version="1">MNLDNCPRCGKLFVKNVRGICQNCIKEIEVEYEHCVKHIRENKGVHMHELSEATGVSVKQITTFIREGRISIANAPNMTYPCEVCGIPIRDGHMCDSCRTRLTKDLNQAIRESSNQDQSNNMGSGTYSAMDKLRGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X3</accession>
    <name>E3E4X3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Glycerol-3-phosphate acyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Acyl-PO4 G3P acyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Acyl-phosphate--glycerol-3-phosphate acyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">G3P acyltransferase</fullName>
            <shortName evidence="10">GPAT</shortName>
            <ecNumber evidence="10">2.3.1.275</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Lysophosphatidic acid synthase</fullName>
            <shortName evidence="10">LPA synthase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">plsY</name>
        <name evidence="11" type="ORF">PPSC2_14705</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>an acyl phosphate + sn-glycerol 3-phosphate = a 1-acyl-sn-glycero-3-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:34075"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:57970"/>
            <dbReference type="ChEBI" id="CHEBI:59918"/>
            <dbReference type="EC" id="2.3.1.275"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="10">Lipid metabolism; phospholipid metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Probably interacts with PlsX.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the PlsY family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.275" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371697.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02340"/>
    <dbReference type="EnsemblBacteria" id="ADO57101">
        <property type="protein sequence ID" value="ADO57101"/>
        <property type="gene ID" value="PPSC2_14705"/>
    </dbReference>
    <dbReference type="GeneID" id="66577042"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3138"/>
    <dbReference type="eggNOG" id="COG0344">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081254_7_1_9"/>
    <dbReference type="OMA" id="ILGHNWP"/>
    <dbReference type="OrthoDB" id="1691856at2"/>
    <dbReference type="UniPathway" id="UPA00085"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043772">
        <property type="term" value="F:acyl-phosphate glycerol-3-phosphate acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01043">
        <property type="entry name" value="PlsY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003811">
        <property type="entry name" value="G3P_acylTferase_PlsY"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30309">
        <property type="entry name" value="PTHR30309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02660">
        <property type="entry name" value="G3P_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01207">
        <property type="entry name" value="G3P_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00023">
        <property type="entry name" value="TIGR00023"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2 10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 10" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="80"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="111"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="144"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="202" mass="21541" checksum="920A7EC4B56C7C19" modified="2011-01-11" version="1">MILQIVAIVLSYLLGSVSFSLLYGKLKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGESSWLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLGYAWPLFWTALIICLFAVWRHRTNIVKLARGNENKLGSKGGDRLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E553</accession>
    <name>E3E553_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Guanylate kinase</fullName>
            <ecNumber evidence="2 9">2.7.4.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">GMP kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">gmk</name>
        <name evidence="11" type="ORF">PPSC2_15460</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Essential for recycling GMP and indirectly, cGMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + GMP = ADP + GDP</text>
            <dbReference type="Rhea" id="RHEA:20780"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the guanylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.8" evidence="2 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371851.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03110"/>
    <dbReference type="EnsemblBacteria" id="ADO57261">
        <property type="protein sequence ID" value="ADO57261"/>
        <property type="gene ID" value="PPSC2_15460"/>
    </dbReference>
    <dbReference type="GeneID" id="66576888"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3303"/>
    <dbReference type="eggNOG" id="COG0194">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001715_1_2_9"/>
    <dbReference type="OMA" id="EWAVVHG"/>
    <dbReference type="OrthoDB" id="1502854at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004385">
        <property type="term" value="F:guanylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00328">
        <property type="entry name" value="Guanylate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008145">
        <property type="entry name" value="GK/Ca_channel_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008144">
        <property type="entry name" value="Guanylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017665">
        <property type="entry name" value="Guanylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020590">
        <property type="entry name" value="Guanylate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00625">
        <property type="entry name" value="Guanylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00072">
        <property type="entry name" value="GuKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03263">
        <property type="entry name" value="guanyl_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00856">
        <property type="entry name" value="GUANYLATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50052">
        <property type="entry name" value="GUANYLATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Guanylate kinase-like" evidence="10">
        <location>
            <begin position="4"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="11"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="190" mass="21473" checksum="FE5FC27259B638BF" modified="2011-01-11" version="1">MAKGLLFVISGPSGVGKGTVGNALREKLPEITYSVSATTRTPRSGEQDGVTYFFKTREEFLGMIERDELLEYAEYVGNYYGTPRDFVDQTLAQGKDIFLEIEVQGALKVKEKFPEGIFIFLLPPSLDELKDRIRGRGTETQATIDHRMSVAVDEMNLLRHYDYAVVNDEIDFACKRIESIIIAEHCKVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E572</accession>
    <name>E3E572_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Terminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xkdE3</name>
        <name evidence="1" type="ORF">PPSC2_16275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372018.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3476"/>
    <dbReference type="EnsemblBacteria" id="ADO57432">
        <property type="protein sequence ID" value="ADO57432"/>
        <property type="gene ID" value="PPSC2_16275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3474"/>
    <dbReference type="eggNOG" id="COG5518">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041404_0_0_9"/>
    <dbReference type="OMA" id="QQCIDAY"/>
    <dbReference type="OrthoDB" id="154615at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016753">
        <property type="entry name" value="PBSX_Firmicutes"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006944">
        <property type="entry name" value="Phage/GTA_portal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04860">
        <property type="entry name" value="Phage_portal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019260">
        <property type="entry name" value="PBSX_XkdE_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="498" mass="56181" checksum="F8B1A0AE1E7092AD" modified="2011-01-11" version="1">MSEGNAQWFQISKADDERRIPSSAQLPDLFDDLYDAHGLLPFALGNDPASCKLLVKNSNIIPQCIEAYKRNIAGYGIALEYLPGESDQTAKAEWDKAEKFLETCNLEDTPDEIISQLIDDLESTGMAHVEIAWPVGSEFPTIFRMNPKYVRCTKESNKATIKRKRRISSTKQVEEFSQEIYARRYAMKRNTSVVWFRLFGTEADEGKEENQIIPLRIGHDGPYGEPRWFGNAPGVVGSREAEELNVNYFSNGRMLSMLLTVTNGKLTKQSLELLKNVRGSNSQGGILYLEAKGEETGGPMDEKVEKVQIKLDKLNDLLQQDALFLEYGKEKKADILSAFRLPPILVGQSSDYNRATADAALRFAEEQVFEPYRKWIMAEIFNKRLFPAMDIFRVRAVLRGPKIIDPADRKAMLDFIADRGIMLVRDLIPIAEDVLGTTIDETKFSEEYLDTPIAQLAASQPTLLEPEPDTDTDDMQNRIATIAKRLLKQADKEAGVHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E584</accession>
    <name>E3E584_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372030.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3488"/>
    <dbReference type="EnsemblBacteria" id="ADO57444">
        <property type="protein sequence ID" value="ADO57444"/>
        <property type="gene ID" value="PPSC2_16325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3485"/>
    <dbReference type="eggNOG" id="ENOG5032QXB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077101_0_0_9"/>
    <dbReference type="OMA" id="QWCVPSL"/>
    <dbReference type="OrthoDB" id="1800964at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="204"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="36082" checksum="F7B2A41E2FEE37A3" modified="2011-01-11" version="1">MENKSNDIFLRQNEDGNIDLLAAQRQMYSEAKRASNYQFAICVVVPILVPFLKAVALSNMIYLGFITLLPLVIIVVNQYFFEKIIKNKKEKAAKFQELFDTNVFKLSWNNRLSGSKEFATKDLSNTAQKYKKKHVSLSNLKNWYPKEYSTVDISAGRVMCQKVNASWDGEIRASFQSFLIKLLFVCIFLIIAISMLLNKTFAETLISIIAPLFPITFYIFKRYSENKETIVRLDKLTDKADRLWEDVLSGSVEQNDLQIQSRKLQDEIYKHRSSALLIWDWFYLRNRSKQENNMNDTANLIVDEYLNRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5A7</accession>
    <name>E3E5A7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">XRE family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqaF</name>
        <name evidence="2" type="ORF">PPSC2_16430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372053.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3511"/>
    <dbReference type="EnsemblBacteria" id="ADO57467">
        <property type="protein sequence ID" value="ADO57467"/>
        <property type="gene ID" value="PPSC2_16430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3508"/>
    <dbReference type="eggNOG" id="COG1476">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_44_5_9"/>
    <dbReference type="OMA" id="DWTIFFE"/>
    <dbReference type="OrthoDB" id="2063007at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="6"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="9096" checksum="7BD10523033CA585" modified="2011-01-11" version="1">MTREWLVKLRNDANKTHDEVATKVKISRQYYGMIESGIRNPSVDLAKKIASFLEFEWTLFFADKSNEMLLNKITKEVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5B8</accession>
    <name>E3E5B8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Carbamoyl-phosphate synthase small chain</fullName>
            <ecNumber evidence="2">6.3.5.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Carbamoyl-phosphate synthetase glutamine chain</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">carA</name>
        <name evidence="4" type="ORF">PPSC2_16485</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2 ATP + H2O + hydrogencarbonate + L-glutamine = 2 ADP + carbamoyl phosphate + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:18633"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-arginine biosynthesis; carbamoyl phosphate from bicarbonate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 1/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the CarA family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.5" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372064.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03820"/>
    <dbReference type="EnsemblBacteria" id="ADO57478">
        <property type="protein sequence ID" value="ADO57478"/>
        <property type="gene ID" value="PPSC2_16485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3519"/>
    <dbReference type="eggNOG" id="COG0505">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035901_2_1_9"/>
    <dbReference type="OMA" id="CFNTGMT"/>
    <dbReference type="OrthoDB" id="662268at2"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00171"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004088">
        <property type="term" value="F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01744">
        <property type="entry name" value="GATase1_CPSase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01209">
        <property type="entry name" value="CPSase_S_chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006274">
        <property type="entry name" value="CarbamoylP_synth_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002474">
        <property type="entry name" value="CarbamoylP_synth_ssu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036480">
        <property type="entry name" value="CarbP_synth_ssu_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035686">
        <property type="entry name" value="CPSase_GATase1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00988">
        <property type="entry name" value="CPSase_sm_chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01097">
        <property type="entry name" value="CPSase_sm_chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52021">
        <property type="entry name" value="SSF52021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01368">
        <property type="entry name" value="CPSaseIIsmall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CPSase_sm_chain" evidence="3">
        <location>
            <begin position="1"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="CPSase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="333"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="378" mass="42050" checksum="9C8630B3CB0E6D94" modified="2011-01-11" version="1">MQARLLLQDGTLFTGTSFGAEGEKTGEVVFNTGITGYQEVLTDPSYCGQIVTMTYPLIGNYGITRDDFESVRPYVHGFAVRHYEPAPSNWRAQYSVGDLLKEYGIIGISDIDTRMLTRIIRHHGTMKGILTTGSQPLEELKEMMSDMTIEELRNQVPLTSTPHPYSSPGNGERIVLIDYGAKSGILRELNKRDCDVVVVPHDTTAEEIRRLDPDGIQLSNGPGDPKDVPHAVRTVAELLGEYPIFGICLGHQLFALASGADTEKLKFGHRGGNHPVKELESGRCFITSQNHGYTVNEESIQGTELEVTHINNNDKTIEGLKHTKYPAFSVQYHPEAAPGPYDNGYLFDRFLEMIREHKRNQPKQPRQAAIAAAVRGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F1</accession>
    <name>E3E5F1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sulfur carrier protein FdhD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">fdhD</name>
        <name evidence="4" type="ORF">PPSC2_17370</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FdhD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372251.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04710"/>
    <dbReference type="EnsemblBacteria" id="ADO57670">
        <property type="protein sequence ID" value="ADO57670"/>
        <property type="gene ID" value="PPSC2_17370"/>
    </dbReference>
    <dbReference type="GeneID" id="66576580"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3711"/>
    <dbReference type="eggNOG" id="COG1526">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056887_4_1_9"/>
    <dbReference type="OMA" id="RAFWNLK"/>
    <dbReference type="OrthoDB" id="948173at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097163">
        <property type="term" value="F:sulfur carrier activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016783">
        <property type="term" value="F:sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00187">
        <property type="entry name" value="FdhD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003786">
        <property type="entry name" value="FdhD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30592">
        <property type="entry name" value="PTHR30592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02634">
        <property type="entry name" value="FdhD-NarQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015626">
        <property type="entry name" value="FdhD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00129">
        <property type="entry name" value="fdhD_narQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Cysteine persulfide intermediate" evidence="3">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="30983" checksum="D34D68330DE61DC0" modified="2011-01-11" version="1">MEKPAEVKREILRYRDGQIKRFEDTVVTEYPVTIKINQQEFATMVCTPEYVEDMAVGFLASEGVIQRYDDIEDIWVQEKEGFVHIKTRRMNEFYQNFHSKRYITSCCGKSRQGFYFINDAKVAKRMNDAHVTVSFDDCFRLMNLMQTSAHTFQETGGVHNAALCDKDGIILSRMDIGRHNALDKIYGYCLKHDIILQDKIIVFSGRISSEILLKVAKIGCEVVLSKSAPTELALELAEDLGITTVGFIRSRSLNVYTHTERIDELVESKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G7</accession>
    <name>E3E6G7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Photosystem reaction center subunit H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372611.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06245"/>
    <dbReference type="EnsemblBacteria" id="ADO58036">
        <property type="protein sequence ID" value="ADO58036"/>
        <property type="gene ID" value="PPSC2_19035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4079"/>
    <dbReference type="eggNOG" id="COG3881">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_132076_0_0_9"/>
    <dbReference type="OMA" id="EDVYFCL"/>
    <dbReference type="OrthoDB" id="1390255at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027275">
        <property type="entry name" value="PRC-brl_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011033">
        <property type="entry name" value="PRC_barrel-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05239">
        <property type="entry name" value="PRC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50346">
        <property type="entry name" value="SSF50346"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRC" evidence="1">
        <location>
            <begin position="2"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="PRC" evidence="1">
        <location>
            <begin position="91"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="19311" checksum="5F0A0C959B777FE1" modified="2011-01-11" version="1">MKLQDMIGLAVFDVEDGKQIGKIHDFMLTADWRITGIELEGKGLFSSHVKMVAWDDIVAYGEDAIMIRNQQAVRKTEAHDIQHTYLLGPGKLKDLSVLTEEGLMLGHISDVYFDQEMGNNIIGLEISDGFVSDIIEGRKWLPCTEDMSIGENAVMVPPLSEQRLEKAIYSVNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E704</accession>
    <name>E3E704_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpsH</name>
        <name evidence="7" type="ORF">PPSC2_22365</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432570.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09830"/>
    <dbReference type="EnsemblBacteria" id="ADO58706">
        <property type="protein sequence ID" value="ADO58706"/>
        <property type="gene ID" value="PPSC2_22365"/>
    </dbReference>
    <dbReference type="GeneID" id="66575594"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4742"/>
    <dbReference type="eggNOG" id="COG0096">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_098428_0_2_9"/>
    <dbReference type="OMA" id="FDQGYIL"/>
    <dbReference type="OrthoDB" id="1692188at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01302_B">
        <property type="entry name" value="Ribosomal_S8_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000630">
        <property type="entry name" value="Ribosomal_S8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035987">
        <property type="entry name" value="Ribosomal_S8_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11758">
        <property type="entry name" value="PTHR11758"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00410">
        <property type="entry name" value="Ribosomal_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56047">
        <property type="entry name" value="SSF56047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00053">
        <property type="entry name" value="RIBOSOMAL_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="132" mass="14742" checksum="BAF73DDB490FF3F1" modified="2011-01-11" version="1">MTMSDPIADMLTRIRNANTVRHETVEMPASTMKKQIADILKREGFIRDAEFVEDSKQGIIRIFLKYGANNERVITGLKRISKPGLRVYTKSNEIPRVLGGLGIAIISTSKGIMTDKEARQSKAGGEVVCYVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7M0</accession>
    <name>E3E7M0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4178 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56825.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885983.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01095"/>
    <dbReference type="EnsemblBacteria" id="ADO56825">
        <property type="protein sequence ID" value="ADO56825"/>
        <property type="gene ID" value="PPSC2_13410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2856"/>
    <dbReference type="eggNOG" id="ENOG502ZBW5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1584892_0_0_9"/>
    <dbReference type="OrthoDB" id="1879207at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025235">
        <property type="entry name" value="DUF4178"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13785">
        <property type="entry name" value="DUF4178"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4178" evidence="1">
        <location>
            <begin position="28"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56825.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="19457" checksum="952F3177F40547EE" modified="2015-05-27" version="2">MSVWKRISNLFAKPEPPKAEKSMLHLNPGDICEVSLVTYEVVGRVHNRARNAVVLTLQDGNQVSYLHIEERETLQFGLYQAIDGRLDNPEEVPTILELDDITYHLEEQYFGHVTVMGRAPFRQGGEQHVWQYQSDDYHLLRVEWQDGRFMLYEGEEVITGDVKVIRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7P7</accession>
    <name>E3E7P7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex</fullName>
            <ecNumber evidence="4">2.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pdhC</name>
        <name evidence="8" type="ORF">PPSC2_13535</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56852.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599812.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01220"/>
    <dbReference type="EnsemblBacteria" id="ADO56852">
        <property type="protein sequence ID" value="ADO56852"/>
        <property type="gene ID" value="PPSC2_13535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2881"/>
    <dbReference type="eggNOG" id="COG0508">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016733_10_0_9"/>
    <dbReference type="OrthoDB" id="1626282at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036625">
        <property type="entry name" value="E3-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004167">
        <property type="entry name" value="PSBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02817">
        <property type="entry name" value="E3_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47005">
        <property type="entry name" value="SSF47005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51826">
        <property type="entry name" value="PSBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="6">
        <location>
            <begin position="3"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="Lipoyl-binding" evidence="6">
        <location>
            <begin position="112"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="Peripheral subunit-binding (PSBD)" evidence="7">
        <location>
            <begin position="229"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="84"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="194"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="268"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56852.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="537" mass="57044" checksum="C173687375452F92" modified="2015-05-27" version="2">MAKFEYKFPELGEGLHEGEIIKMHIKPGDKVTDDDIIMEVQNDKAVVEVPCPVNGTVQEVFAKDGDVFNVGQVVAVIDAEGELPEQEDAPEAPAASPEPSAAAQGGAAGAARFEYKFPELGEGLHEGEIIKMHIKPGDKVTDDDIIMEVQNDKAVVEVPCPVNGTVQEVFAKDGDIFNVGQVVAVIAAEGELPEQEEAPAAVKQEEDAAKGGANTQPGATPAASNKDVLATPSVRKFAREQGVNIAQVSGSGKNGKITKEDVEAFKNGGGQAAAPAAKEAAKAQEPAKKEAKAAAPSAPAADPRAEEERVPFKGIRKAISNAMVKSAYTAPHVTIMDEVDVTELVAFRTRIKPIAEKKGTKVTYLPFIVKALVAASRQFPALNASIDEEANEIVYKKYYNIGIATDTDNGLIVPVIKDADRKSIWMIADSIRDLAVRGRDGKLAANEMRGSTISITNIGSAGGMFFTPIINFPEVAILGTGRISEKAVVKNGEIVAAPVMALSLSFDHRIIDGATAQNFMNYIKQLLANPELLVMEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Z8</accession>
    <name>E3E7Z8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371707.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3151"/>
    <dbReference type="EnsemblBacteria" id="ADO57111">
        <property type="protein sequence ID" value="ADO57111"/>
        <property type="gene ID" value="PPSC2_14750"/>
    </dbReference>
    <dbReference type="GeneID" id="66577033"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3148"/>
    <dbReference type="eggNOG" id="ENOG50305ZG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2011966_0_0_9"/>
    <dbReference type="OMA" id="KARTKMM"/>
    <dbReference type="OrthoDB" id="1683461at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="64"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="125" mass="13608" checksum="94ACDDCEA9F101BD" modified="2011-01-11" version="1">MKTSSFFLGIVLGAVASSLISRNRNALGLSMDMGGKKGGNLVQKARTKMMDAAFPGMGDIALNTQDTHKDHDHRSQADKTVHNAQTAKSKEENMKLIKEFISTSPDVKREVEQILKETHTAVPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E848</accession>
    <name>E3E848_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Thymidine kinase</fullName>
            <ecNumber evidence="2 9">2.7.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">tdk</name>
        <name evidence="11" type="ORF">PPSC2_14985</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + thymidine = ADP + dTMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19129"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17748"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.21"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the thymidine kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.21" evidence="2 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371754.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02620"/>
    <dbReference type="EnsemblBacteria" id="ADO57161">
        <property type="protein sequence ID" value="ADO57161"/>
        <property type="gene ID" value="PPSC2_14985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3198"/>
    <dbReference type="eggNOG" id="COG1435">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064400_3_0_9"/>
    <dbReference type="OMA" id="GWLELIC"/>
    <dbReference type="OrthoDB" id="1279539at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004797">
        <property type="term" value="F:thymidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071897">
        <property type="term" value="P:DNA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001267">
        <property type="entry name" value="Thymidine_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020633">
        <property type="entry name" value="Thymidine_kinase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11441">
        <property type="entry name" value="PTHR11441"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00265">
        <property type="entry name" value="TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035805">
        <property type="entry name" value="TK_cell"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00603">
        <property type="entry name" value="TK_CELLULAR_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0237">DNA synthesis</keyword>
    <keyword evidence="6 9 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR035805-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="24792" checksum="4DA84AA28405E3DA" modified="2011-01-11" version="1">MAFSFGDEDLQRYVHVKRGEFALPTGRITIITGPMFSEKSGELIRRCQKLIQYGHRKVVAYKPAEDNRYAEDEIVSRIGYRLPAISIPRKLTDELVQRILQETKDADVVAFDEVQFFSRHIMSLIQELAYCGKHVIADGLNLDYRGKEFGYVGGLLAMADDIEKLTSFCAVCGSSEAVFTQRMVNGKPSTVGPIVMIGDSEAYEPRCRNCFIPPHKVNCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8D8</accession>
    <name>E3E8D8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcQ7</name>
        <name evidence="2" type="ORF">PPSC2_15795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371916.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03490"/>
    <dbReference type="EnsemblBacteria" id="ADO57330">
        <property type="protein sequence ID" value="ADO57330"/>
        <property type="gene ID" value="PPSC2_15795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3371"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021021_3_0_9"/>
    <dbReference type="OMA" id="WDENKTA"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168255" evidence="1">
        <location>
            <begin position="36"/>
            <end position="560"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="560" mass="62152" checksum="300D3F2664A9AD73" modified="2011-01-11" version="1">MRVHSKKKLLSLLAATMVLGVGLVGCSGAGNDGNADNTAKTENVYKEKYNPEVTISTVWGVDPALKFKNGESIENNVATKWAKEKFGINVKSLWSVTDTNGAFATKLRLAMSSGQEMPDVVVLGTENEQLAQDMIDSGMFAEVGPLFDKYASDSWKQAMSQDTNVWNQYSRDGKKMGIPVLDFAYNHDYVLWVRQDWLDKLGMKAPETMDDLEKVMDAFKNKNPDGLAPDKVTPLSIGFKTSMNTWMGDPSWIFGAYGTLPQQWNKGANGSLEYGSVQPGMKPGLQKLSEWLKKGYIPQEAALWDENKTAEPTVAGTAGMIPGPYWMSGWPLQDTVKNAPSAVWKPIKIPAGPDNKAMRHGTQYTNGVVLINKQMQHPEAFFTYQNYLFDHYANAKPDGDLSNGLFKGYDYDLDANGKLMSIDKIPGGYVNSIRYLLVRDGARIPDAQMKALLSLADGAEPKTRLEKDVMVNYGKDTPAAAKVLMEQKDISMKDQFTGPTTPTMKAKKDYLDKIESQTFNEIIYGKQPISAFDTFVQTWKAAGGEQITNEVNEWYKSVEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8E3</accession>
    <name>E3E8E3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371921.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57335">
        <property type="protein sequence ID" value="ADO57335"/>
        <property type="gene ID" value="PPSC2_15815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3376"/>
    <dbReference type="HOGENOM" id="CLU_2863628_0_0_9"/>
    <dbReference type="OMA" id="QMQAVVI"/>
    <dbReference type="OrthoDB" id="1982941at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7275" checksum="54816CE68D8FB805" modified="2011-01-11" version="1">MNDEIQLAVSQMQAVVIRLLNGNTVIGWPKLLSDQETQQFKLYDDEHVYTISVNDVDTVARVIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8H1</accession>
    <name>E3E8H1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Peptide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dppE</name>
        <name evidence="6" type="ORF">PPSC2_16685</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372104.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3564"/>
    <dbReference type="EnsemblBacteria" id="ADO57520">
        <property type="protein sequence ID" value="ADO57520"/>
        <property type="gene ID" value="PPSC2_16685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3560"/>
    <dbReference type="eggNOG" id="COG4166">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017028_0_3_9"/>
    <dbReference type="OMA" id="GIKHEWS"/>
    <dbReference type="OrthoDB" id="162819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="1" id="KW-0564">Palmitate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168071" evidence="4">
        <location>
            <begin position="28"/>
            <end position="566"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="92"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="30"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="566" mass="62944" checksum="C8ED1A9DCEB2A11A" modified="2011-01-11" version="1">MKRKSFLVLLTLVLAVGALLAGCGGKNDTNGKGAQENTSTTPAPADKQILRINLASEPPTFDPAQAQDTQANTVLKTMYEGLVRMGPDGKEIPGVAESWKISDDGKTYTFKLRDTAKWSNGDPVKASDFVFAWQRVLDPSTAPAPPYAYQLYYIKNAEGYNLSTSKSFKGTKVTDFKDVGVKAVDDHTLQVELEHATPYFLGLTSFYTYYPVHPSVEGNDKWATKKESMITNGPFTLSTWETGQKIEVSKSENYWGKDEIKLKKITMSLVNSGATELASYRSGQLDYAGKPNGEIPADQMMAVKNEMPNEFQAKGIASTYYYLFNVTEKPFNNLKIRKAFAMSIQRQPIVDRVTMGGEIPAYGFVPPGIKGLSQEYRNEHKDDYFKEDVAEAKKLLQEGMKEEGVTSLPPITLLYNSTEGHQKIALAVADMWKKSLGIDVKTQNQEWGVFIQTRNKLNFQIARGGWSADFNDPMTFLDIWTTGNGNNNSGYSNPEYDGLIKAAKTETDPGKRMEIFAKAEKLLVQDDMVLLPIYYYSNTSLTKPNVKGVALDFSGAIDFTRAYITQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8I5</accession>
    <name>E3E8I5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lytic transglycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjbJ</name>
        <name evidence="3" type="ORF">PPSC2_16750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transglycosylase Slt family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372118.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04085"/>
    <dbReference type="CAZy" id="GH23">
        <property type="family name" value="Glycoside Hydrolase Family 23"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57534">
        <property type="protein sequence ID" value="ADO57534"/>
        <property type="gene ID" value="PPSC2_16750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3574"/>
    <dbReference type="eggNOG" id="COG0741">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065765_4_1_9"/>
    <dbReference type="OMA" id="QNAREKY"/>
    <dbReference type="OrthoDB" id="1444566at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008933">
        <property type="term" value="F:lytic transglycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000270">
        <property type="term" value="P:peptidoglycan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000189">
        <property type="entry name" value="Transglyc_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00922">
        <property type="entry name" value="TRANSGLYCOSYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT" evidence="2">
        <location>
            <begin position="101"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="24851" checksum="2E3D28EAFD175A38" modified="2011-01-11" version="1">MQIDPRVSKSMLDMQLLNNMSATTQTGTADAFSGLLEQVGQLETDNAVTRENSGDVTRDENGLLWLQLGPSRGTASSLAVYPASSNTATDGPTKATAYDSLINEASQKYGVPVALIKAVIDTESSFNPSVTSSAGAKGLMQLMDATAQGLGVSDPYDPAQNIDAGVRYLSYQIKRFNGQENMALAAYNAGPGRVQRLGVSSDEQLMSVLDKLPVETQRYISKIQNAREKYTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L8</accession>
    <name>E3E8L8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Serine protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yqeZ</name>
        <name evidence="4" type="ORF">PPSC2_16890</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372150.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04225"/>
    <dbReference type="EnsemblBacteria" id="ADO57567">
        <property type="protein sequence ID" value="ADO57567"/>
        <property type="gene ID" value="PPSC2_16890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3606"/>
    <dbReference type="eggNOG" id="COG1030">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024619_2_0_9"/>
    <dbReference type="OMA" id="QMDTPGG"/>
    <dbReference type="OrthoDB" id="973681at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002810">
        <property type="entry name" value="NfeD-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002825">
        <property type="entry name" value="Pept_S49_ser-pept_pro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01957">
        <property type="entry name" value="NfeD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01972">
        <property type="entry name" value="SDH_sah"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="277"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="301"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="347"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="NfeD" evidence="3">
        <location>
            <begin position="357"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="455" mass="48428" checksum="89C983DCC6CC08B1" modified="2011-01-11" version="1">MHREHHHSSRKLIFLTLWIMISVLLLPLVYSGSALAQTKGGAVFVIPVDQEIEQGLGKFMERGFAEAVDSKAGLILLDINTPGGRVDTAEKLGKLIKDSPIPTVAYIKGEAASAGSYIALSANKIAMKPGSIIGAAALVDGRGNAITDPKTIAWWKSSMASAAEAGGRNPDIARGMVDSKTTVSIPEMNFNKENGQIISLTSEEALKLGYADHIASSEQEVIQWMGYSTDDVIRVERTWAEKAAEILTNPIVQTLLLFIGIAGVVIELLVPGFGVPGILGVLGFGLYFFGNYIAGFAGSETWLLFIIGLALLILEMFIPSFGILGILGSISLVAGVVRAAYNMQHAFISLGIAFAGAVAVVAIIAVVFKDRGIWNRFILQERLTADQGFSSVVNRETLLGQRGVSLTPLRPAGTVLIADERVDVVTNGEFIAPNMPIIVSKVEGGRIVVKADASV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Q0</accession>
    <name>E3E8Q0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372339.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3805"/>
    <dbReference type="EnsemblBacteria" id="ADO57759">
        <property type="protein sequence ID" value="ADO57759"/>
        <property type="gene ID" value="PPSC2_17790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3802"/>
    <dbReference type="HOGENOM" id="CLU_069374_0_0_9"/>
    <dbReference type="OMA" id="ILMNYSY"/>
    <dbReference type="OrthoDB" id="742920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="331" mass="39187" checksum="FBA4193FA12F2E24" modified="2011-01-11" version="1">MSFSKIYDYKLRAYFNERISDLSHEDLFYSYPDQEQNLRILTLNINEQDHISLVRWHDLFDRSLFTKMDHPILSVADAERLIRLLSLIFNIFDIHKDIAYSQKNLCCVYYQYQVSHLAERGNEFSPTQDRLLFLHQLLFELGLGDDIYDRLTIENNKLMYSMEDARQYDMHILIDILHEHINKNEMDIDTRAALGKIKNLQGQLVSFILGSHDVYDFPYDDFNKPFAEATMFIHAYNSNKNRVLEVLIDCINEHQSPTEKFISNLILMNYSYFILKSNPSEITYFKCFCKKKPGVFMKVLSALLEIRFFIDKSSFTNTGINYYLSRLKGVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8R0</accession>
    <name>E3E8R0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaS11</name>
        <name evidence="5" type="ORF">PPSC2_17840</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57769.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324605.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05185"/>
    <dbReference type="EnsemblBacteria" id="ADO57769">
        <property type="protein sequence ID" value="ADO57769"/>
        <property type="gene ID" value="PPSC2_17840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3812"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_0_9"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="231"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="9"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57769.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="332" mass="39143" checksum="7EDF5A35749368EB" modified="2015-05-27" version="2">MNLHELDQLLRSKTEIELLQQQNNQVINDLSKESENERFFDINQNMYRMPALFFFGEHDIYISKHNRFAPMLEHMHEFIELNYVYSGKCNQIIAGKEIELCEGQVCVLDKDVPHSIAPLGENDILINILLQRETISSLFLQRLSKKKSLIGEFLANSVLQHQHHNHFIIFESQHNENLQYILRRILIEYFSRQEDSMELVKAYLPIVFGELVRVLESEHNIHLNQQESNITSILNYMEEHYQHLSLQQLSTHFNYNSTYLSNKLKKVTGLTYTQLIANIKLNAAYSLVVNTNLPFEMIFKQVGYNSMSFFYKKFKTAYGATPQNIRNKQMRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="79" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8V4</accession>
    <name>E3E8V4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Aspartate--tRNA ligase</fullName>
            <ecNumber evidence="7">6.1.1.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Aspartyl-tRNA synthetase</fullName>
            <shortName evidence="7">AspRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">aspS3</name>
        <name evidence="7" type="synonym">aspS</name>
        <name evidence="9" type="ORF">PPSC2_19115</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp)</text>
            <dbReference type="Rhea" id="RHEA:19649"/>
            <dbReference type="Rhea" id="RHEA-COMP:9660"/>
            <dbReference type="Rhea" id="RHEA-COMP:9678"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.12" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372627.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06315"/>
    <dbReference type="EnsemblBacteria" id="ADO58052">
        <property type="protein sequence ID" value="ADO58052"/>
        <property type="gene ID" value="PPSC2_19115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4095"/>
    <dbReference type="eggNOG" id="COG0173">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014330_3_2_9"/>
    <dbReference type="OMA" id="YQLDVEM"/>
    <dbReference type="OrthoDB" id="226836at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004815">
        <property type="term" value="F:aspartate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006422">
        <property type="term" value="P:aspartyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00044">
        <property type="entry name" value="Asp_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004524">
        <property type="entry name" value="Asp-tRNA-ligase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004115">
        <property type="entry name" value="GAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029351">
        <property type="entry name" value="GAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22594:SF5">
        <property type="entry name" value="PTHR22594:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02938">
        <property type="entry name" value="GAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55261">
        <property type="entry name" value="SSF55261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00459">
        <property type="entry name" value="aspS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="8">
        <location>
            <begin position="142"/>
            <end position="555"/>
        </location>
    </feature>
    <feature type="region of interest" description="Aspartate" evidence="7">
        <location>
            <begin position="199"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="221"/>
            <end position="223"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="448"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="482"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="489"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="534"/>
            <end position="537"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="592" mass="66712" checksum="73445484A507D566" modified="2011-01-11" version="1">MKRSHQCGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGDALQIADRVRSEYVLEVTGTVVKRDAETINSNLPTGEIEVRVTEIEVLNASKTPPFFIEDGVEVDESLRLKYRYLDLRRPEMHQTLKLRSKAAKVFRDFLDGEDFIEVETPILTKSSPEGARDYLVPSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQVARCFRDEDLRADRQPEFTQIDIETSFMQQDDLLPMMERLMVKLFKETVGVELETPFQRITHAEAMDKYGSDKPDLRFGLELVNVNDIVATSGVKVFASVIEKGGEVKVLNAKGCGTWSRKDIDDLGPFAARYGAKGLAWIQVKEGEFKGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKIGRHLGLIDDKKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKEEDLALLDTDPGQVRAQAYDIVLNGYEVGGGSMRIFKREIQEKMFKALNLPPEEVKDKFGYLLDAFEYGTPPHGGIAFGFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLDQLHIRLAPKPVAPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8X9</accession>
    <name>E3E8X9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 14">Crossover junction endodeoxyribonuclease RuvC</fullName>
            <ecNumber evidence="11 14">3.1.21.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13 14">Holliday junction nuclease RuvC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12 14">Holliday junction resolvase RuvC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">ruvC</name>
        <name evidence="15" type="synonym">ruvC3</name>
        <name evidence="15" type="ORF">PPSC2_19230</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 14">Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 14">
            <text>Endonucleolytic cleavage at a junction such as a reciprocal single-stranded crossover between two homologous DNA duplexes (Holliday junction).</text>
            <dbReference type="EC" id="3.1.21.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="14">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 14">Belongs to the RuvC family.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.10" evidence="11 14"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372652.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06430"/>
    <dbReference type="EnsemblBacteria" id="ADO58077">
        <property type="protein sequence ID" value="ADO58077"/>
        <property type="gene ID" value="PPSC2_19230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4119"/>
    <dbReference type="eggNOG" id="COG0817">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_091257_3_1_9"/>
    <dbReference type="OMA" id="AICHIWR"/>
    <dbReference type="OrthoDB" id="1815080at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008821">
        <property type="term" value="F:crossover junction endodeoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16962">
        <property type="entry name" value="RuvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00034">
        <property type="entry name" value="RuvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020563">
        <property type="entry name" value="X-over_junc_endoDNase_Mg_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002176">
        <property type="entry name" value="X-over_junc_endoDNase_RuvC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30194">
        <property type="entry name" value="PTHR30194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02075">
        <property type="entry name" value="RuvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00696">
        <property type="entry name" value="RSOLVASERUVC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00228">
        <property type="entry name" value="ruvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01321">
        <property type="entry name" value="RUVC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 14" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7 14" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8 14" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 14" id="KW-0460">Magnesium</keyword>
    <keyword evidence="14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 14" id="KW-0540">Nuclease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="14">
        <location>
            <position position="7"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00030973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO58077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="167" mass="18511" checksum="4EB7FB33E687ED0E" modified="2011-01-11" version="1">MRFLGIDPGIAIVGFGFVDKIGSKVVPVQYGCIQTEAHTPEEDRLLHVYEGMLQLIDKYKPDAVALEKLFFNRNVTTAMSVSQARGVLVLAAKQRNLPIGEYTPMQVKQAIVGYGKAEKKQVQEMIRMFLKLQAVPKPDDVADALAVAICHAHSYGLNSKLNEVLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E942</accession>
    <name>E3E942_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydeP9</name>
        <name evidence="2" type="ORF">PPSC2_24860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59249.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675729.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5312"/>
    <dbReference type="EnsemblBacteria" id="ADO59249">
        <property type="protein sequence ID" value="ADO59249"/>
        <property type="gene ID" value="PPSC2_24860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5269"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_2_9"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="17"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59249.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14684" checksum="3D24210BF7075794" modified="2015-05-27" version="2">MRKRLNNGVNCTPTKGCPVEVTLSIIGGKWKGIILYELLGGTKRFQDLRRALPTATQKMLTLQLRELEADNLIHREVHHLVPPKVEYSLTPLGASLESILTQMKAWGERFQAEHHLSLFKPEITNRCNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E959</accession>
    <name>E3E959_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bceS</name>
        <name evidence="5" type="ORF">PPSC2_24935</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373799.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12430"/>
    <dbReference type="EnsemblBacteria" id="ADO59266">
        <property type="protein sequence ID" value="ADO59266"/>
        <property type="gene ID" value="PPSC2_24935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5284"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_13_1_9"/>
    <dbReference type="OMA" id="YEWLRIH"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="4">
        <location>
            <begin position="121"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="39373" checksum="A2C58204ADCBF825" modified="2011-01-11" version="1">MIKKYLRERLSWILLFVCQQFLILFIAYVDAAIPLMPILYIVFLSMMIFLVFLIIRYLKETKFYTTLEEWESPLELTGIGEPESPFEQIIEQKITDQTERLQQIISQNQLTLEHEKDELLSWIHEVKTPLTTMHLMIERLDDKSLKAQLTYEWLRIHLLLDQQLHHKRISFIENDLYVEQVDLKSLVFKEIKALQSWCIQKGIGFDIRLEQMEVLSDAKWLAFIIRQLLTNAIKYSDASDIIIHSYEQRDRIQLEVQDFGRGIDPKDIPRIFEKGFTSTTQHSDHTSTGMGLYLTKKAAQSLLIHIDVHSKPNMGTTFTLIFPKRNDFVSMMSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9G4</accession>
    <name>E3E9G4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Protein GrpE</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">HSP-70 cofactor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 7" type="primary">grpE</name>
        <name evidence="7" type="ORF">PPSC2_17015</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 5">Belongs to the GrpE family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372177.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04350"/>
    <dbReference type="EnsemblBacteria" id="ADO57595">
        <property type="protein sequence ID" value="ADO57595"/>
        <property type="gene ID" value="PPSC2_17015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3634"/>
    <dbReference type="eggNOG" id="COG0576">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057217_5_2_9"/>
    <dbReference type="OMA" id="YAYEKIA"/>
    <dbReference type="OrthoDB" id="1906715at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000774">
        <property type="term" value="F:adenyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051087">
        <property type="term" value="F:chaperone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00446">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.22.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01151">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000740">
        <property type="entry name" value="GrpE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013805">
        <property type="entry name" value="GrpE_coiled_coil"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009012">
        <property type="entry name" value="GrpE_head"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21237">
        <property type="entry name" value="PTHR21237"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01025">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00773">
        <property type="entry name" value="GRPEPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51064">
        <property type="entry name" value="SSF51064"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58014">
        <property type="entry name" value="SSF58014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01071">
        <property type="entry name" value="GRPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="10"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="190" mass="21560" checksum="C33F5ECC4210E465" modified="2011-01-11" version="1">MKEEQAFQDEKQQNVSTEEAAETSQQEEPVNEAAALEAEEENTEVAKLRAEAEEHQQRFLRAQADFDNFRRRTLKEKEDLAKYASMKLVTELVPVLDNFERALATASQGAESESFTKGVEMIFRQFESVLQAEGVTAMNAVGQPFNPDFHQAIMQVESEEHDEGIVVEEVQKGYMLKDKVLRPAMVKVSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9R3</accession>
    <name>E3E9R3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydeE5</name>
        <name evidence="3" type="ORF">PPSC2_18230</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372432.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3901"/>
    <dbReference type="EnsemblBacteria" id="ADO57853">
        <property type="protein sequence ID" value="ADO57853"/>
        <property type="gene ID" value="PPSC2_18230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3894"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3708">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_81_1_9"/>
    <dbReference type="OMA" id="HMIGFAT"/>
    <dbReference type="OrthoDB" id="1748122at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010499">
        <property type="entry name" value="AraC_E-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029442">
        <property type="entry name" value="GyrI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06445">
        <property type="entry name" value="GyrI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00871">
        <property type="entry name" value="AraC_E_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="33149" checksum="D8C0A65A54490072" modified="2011-01-11" version="1">MDLLKSMNEAIKYIEENLTNEIDFKEVARLAYCSEFHFKRMFSFLAGATLSEYIRRRRLTLAAFELKDSNIKVIDIAIKYGYNSPDSFARAFQNLHGLTPSEARINGRSLKAYPRMAFQLSIKGGSEMNYRIEEKGAFRIVGIQKRVPIIFNGVNPEIAAMWESLDGETINNLKRISNIEPMGLLSASTNFSEGRMEEKGELDHYIGVATTKECPDNLTQLKVAASTWAVFEAIGSFPDALQDVWGRIYSEWFPSSNYEQIEGPEILWNENKDITSPNFKSEIWIRILKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z8</accession>
    <name>E3E9Z8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="15">PTS sugar transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">nagE</name>
        <name evidence="15" type="ORF">PPSC2_19565</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372703.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06785"/>
    <dbReference type="EnsemblBacteria" id="ADO58131">
        <property type="protein sequence ID" value="ADO58131"/>
        <property type="gene ID" value="PPSC2_19565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4171"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_1_0_9"/>
    <dbReference type="OMA" id="ETDATIM"/>
    <dbReference type="OrthoDB" id="2035550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="Glu_permease_IIB"/>
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        <property type="entry name" value="PTrfase_EIIB_Cys"/>
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        <property type="entry name" value="PTS_EIIC"/>
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        <property type="entry name" value="PTS_EIIC_1"/>
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        <property type="entry name" value="PTS_IIB_1"/>
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        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="PTS_EIIC"/>
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        <property type="entry name" value="SSF55604"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
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    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 15" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="86"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="153"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="179"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="247"/>
            <end position="268"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="280"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="305"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="358"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="14">
        <location>
            <begin position="1"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="13">
        <location>
            <begin position="416"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="438"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
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    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
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    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00022692"/>
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            <dbReference type="ARBA" id="ARBA00022777"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
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    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO58131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="493" mass="53145" checksum="74A84BFB5A8757E8" modified="2011-01-11" version="1">MLKFLQKIGKSLMLPVATLPAAGILQGLALINYETDIPLGPGVGGFLNHYVTPFLNEGAGAIFGNLALIFSIGVAIGLAGDAVAALSAVIAYLVLTRILAAVPGIFAYIPDDVKLDMGVLGGIFIGGWSAYLFKKYHNIQLPDWLGFFSGKRFVPMITAFTTMILAILLGMIWSPIQDGIAAFGNWIVGFGGIGSMVFMIANRLLIPLGLHHVLNSIAWFQIGDYTNAAGEVVHGDLTRFFAGDTSAGMFMSGFFPIMMFALPAAALAFIHTAKPEKRKAVASIFIGSALASFLTGITEPLEFSFMFIAPLLYGVHALLTGLSGLVVYLLDVKLGFSFSAGLIDYLVNMKLSTHPLRMIPIGLVFAFVYYFLFRFIILKFNLKTPGREDDVDDNLLSEANESIPHGKASTLSDIQSSHADKVLTYLGGSDNIQSIDACITRLRLVVKDDKVVNDQALKKLGASGIIRLGNGTLQVIFGTRSETLKDEIQRLMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="82" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA84</accession>
    <name>E3EA84_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Lipoyl synthase</fullName>
            <ecNumber evidence="6">2.8.1.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Lip-syn</fullName>
            <shortName evidence="6">LS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Lipoate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Lipoic acid synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Sulfur insertion protein LipA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lipA</name>
        <name evidence="9" type="synonym">lipA3</name>
        <name evidence="9" type="ORF">PPSC2_20670</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>[[Fe-S] cluster scaffold protein carrying a second [4Fe-4S](2+) cluster] + 4 H(+) + N(6)-octanoyl-L-lysyl-[protein] + 2 oxidized [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = (R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + 2 5'-deoxyadenosine + [[Fe-S] cluster scaffold protein] + 4 Fe(3+) + 2 hydrogen sulfide + 2 L-methionine + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:16585"/>
            <dbReference type="Rhea" id="RHEA-COMP:9928"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:14568"/>
            <dbReference type="Rhea" id="RHEA-COMP:14569"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:33722"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:78809"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="2.8.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Protein modification; protein lipoylation via endogenous pathway; protein N(6)-(lipoyl)lysine from octanoyl-[acyl-carrier-protein].</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the radical SAM superfamily. Lipoyl synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.8" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58376.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324696.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07915"/>
    <dbReference type="EnsemblBacteria" id="ADO58376">
        <property type="protein sequence ID" value="ADO58376"/>
        <property type="gene ID" value="PPSC2_20670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4409"/>
    <dbReference type="eggNOG" id="COG0320">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033144_2_1_9"/>
    <dbReference type="OrthoDB" id="1184806at2"/>
    <dbReference type="UniPathway" id="UPA00261">
        <property type="reaction ID" value="UER00374"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016992">
        <property type="term" value="F:lipoate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102552">
        <property type="term" value="F:lipoyl synthase activity (acting on glycine-cleavage complex H protein"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102553">
        <property type="term" value="F:lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00206">
        <property type="entry name" value="Lipoyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031691">
        <property type="entry name" value="LIAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003698">
        <property type="entry name" value="Lipoyl_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10949">
        <property type="entry name" value="PTHR10949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16881">
        <property type="entry name" value="LIAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005963">
        <property type="entry name" value="Lipoyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00271">
        <property type="entry name" value="lipoyl_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00510">
        <property type="entry name" value="lipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="8">
        <location>
            <begin position="51"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="277"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="278"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58376.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="34226" checksum="C8728EFB77FAA2FA" modified="2015-05-27" version="2">MSKKVKEAKPDWIRIKLTTGDNYQEIKSMMRSKTLHTVCEEARCPNIYECWANRTATFMILGDICTRACRFCAVNTGMPTELDLQEPERVAEAAENMNLKHCVVTSVARDDLKDGGATIFAETVRAIRRRLPFCSVEVLIPDFMGDIESLRIVMDAKPDILNHNIETVERMSDKVRAKAKYHRSLELLQRAKQLNPAIPTKSSIMLGVGEEWDEIIQTMDDLRKVDCDIMTIGQYLQPSEKHLYVQKYYPPEDFAKLKEEGLQRGFSHVESGPMVRSSYQAHEQVKSAAQHKEESALSQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAB4</accession>
    <name>E3EAB4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">PEP-utilizing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_21490</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373100.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4583"/>
    <dbReference type="EnsemblBacteria" id="ADO58532">
        <property type="protein sequence ID" value="ADO58532"/>
        <property type="gene ID" value="PPSC2_21490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4569"/>
    <dbReference type="eggNOG" id="ENOG5030IAP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_572176_0_0_9"/>
    <dbReference type="OMA" id="WENELTG"/>
    <dbReference type="OrthoDB" id="541469at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="320"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="478" mass="52094" checksum="AF6EC0AE32E47145" modified="2011-01-11" version="1">MEAKLMHVFAELLGGINSRDCNVPEPGMESAARRLAMETLRAGSHQVSAAQEEDPLGWLVGLAEQGAISRAEALLAANPELLGESMLNNGNDTEQAMDTLLKWSDEYSDTSIRLYADAPASMSRKSTGIRDLDGYSLLHGPLSLASGRVRELCYAYLDAAESGQKIHALAGEPDPILVPGSRASETYTTFNKASGLIGLCEHLSRRIIGLLETEYEGLFELLDGLPLTIALTEQNNAVGIGSLQDMQLEALLRAALRSMRQGGEPRLEIMVRNPTDVNQFQTIRDWIDGVAEQTLCGRLRCVPYRVGVLLTVDTSLVPNAGQIGDEQSAQSEKSDTADNMSEVSARQTKQAAQAADLARFADTVILEVLPAPSAGIRAGDPLIPSVADGHENANDTIKRIMEAVRRVKPEVPIWVAIDKIHHFLDGNWIWENELTGVICSDPAVPTVRLAAARWRLQQQANRQHTSETAHTHAWKFPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAD5</accession>
    <name>E3EAD5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_21590</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373120.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08785"/>
    <dbReference type="EnsemblBacteria" id="ADO58553">
        <property type="protein sequence ID" value="ADO58553"/>
        <property type="gene ID" value="PPSC2_21590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4590"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_0_9"/>
    <dbReference type="OMA" id="LICITDE"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="295"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="317"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="486"/>
            <end position="592"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="596" mass="67630" checksum="8B71021BF08A5E15" modified="2011-01-11" version="1">MYRGVRHLMNNMRMRNKLLFSYVLIVMIPVLVVGGCVTFYLREQALDSAIAQTVNNVEKIKSQTANLLRVPTDISNGLMFDKRLKEMANRRYPGMVELMNAYHQYKDFNEYTQQYREVATIRFYSYNPTLVNNLEFIPVDSNIERQPWFQEALKGTAINWFYIQDKEDTPVNRLSLVRQIPFPEYNSKGVLMIALSQTELNHMLSKEPFETLIADRNGIVVAATHPQSVGQTLTDLHLGFDVQRAGKGIYEAKINGTPSNIIVDELLPTSSVSGLTIISVFSTEHIVQGANRVSLIGALCVLAVLIMALILITIISWLITKRLQRLSYELGQVAAGDFHVVSSVEGRDEIGDLSRRFNYMVSSIRQLMAQVYETSEHNNKLELAQKDIKLKMMASQINPHFLFNALESIRMKAHLNGEAEIATTVRLLGRLMRRNLEIGSGKTTVLQELDMVRSYLQIQQFRFGNRLVYEVNLEESAKDMSIPPLIIQPLVENAVIHGLENKEEPVTVKVDITIEQRELHIKVADDGIGMKEEQLTRLLARITGTEEPEGSSIGLRNVHQRLTLMYGERYGLHIESALQVGTTVYFSIPREEASNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAE4</accession>
    <name>E3EAE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thioredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">trx</name>
        <name evidence="2" type="ORF">PPSC2_21635</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373129.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08830"/>
    <dbReference type="EnsemblBacteria" id="ADO58562">
        <property type="protein sequence ID" value="ADO58562"/>
        <property type="gene ID" value="PPSC2_21635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4600"/>
    <dbReference type="eggNOG" id="COG0526">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090389_14_3_9"/>
    <dbReference type="OMA" id="FLSADWC"/>
    <dbReference type="OrthoDB" id="1630944at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="12415" checksum="B241C6E69D7F20CC" modified="2011-01-11" version="1">MERIESEQQYQDLINGDGLTVVKFDTSWCPDCKTLDKFMDGIMKENADKRFFALDAEKFQPIAEQNQVRGIPSLLVFRNGEKIAHLHSKYAKTPAQVSEYLTTLESKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAH6</accession>
    <name>E3EAH6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Phosphonate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">phnD</name>
        <name evidence="9" type="ORF">PPSC2_21780</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the phosphate/phosphite/phosphonate binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373161.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08915"/>
    <dbReference type="EnsemblBacteria" id="ADO58594">
        <property type="protein sequence ID" value="ADO58594"/>
        <property type="gene ID" value="PPSC2_21780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4634"/>
    <dbReference type="eggNOG" id="COG3221">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051472_0_0_9"/>
    <dbReference type="OMA" id="QGMRFDK"/>
    <dbReference type="OrthoDB" id="988224at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005770">
        <property type="entry name" value="PhnD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01098">
        <property type="entry name" value="3A0109s03R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0564">Palmitate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168992" evidence="7">
        <location>
            <begin position="26"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="8">
        <location>
            <begin position="50"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="34831" checksum="2E5A77AFFB51FD77" modified="2011-01-11" version="1">MFKKALTLCMTFTLAAGLAACGSNASNNNSASTPGTDGSKNESTAYVPKELKVQFVPSQNADTLEAKAKPLEKLLGDKLGIPVKVTVSPDYNTIVEAMSSKQVDVGFLPPNAYVLAHDNRKAADLLLQAQRYGIEDATGKDTTEKVNFYKAMIVVKKDSPIQSLADLKGKKVGWQNVTSSAGYVYPAAELKKAGVDPDTDVQGVTIKGHDAAILALLNGQVDAVAVFQDARNTVKKEIPDVFEKTRVIHYTAKIPNDTVSVRSDMDQTWRDKIAQAFIDIANDPEGGEIIKEIYTHVGYEKGDDKNFDSVREYAEAVGQAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAK9</accession>
    <name>E3EAK9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">dTDP-4-dehydrorhamnose 3,5-epimerase</fullName>
            <ecNumber evidence="3">5.1.3.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Thymidine diphospho-4-keto-rhamnose 3,5-epimerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rmlC</name>
        <name evidence="4" type="ORF">PPSC2_22670</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-beta-L-rhamnose</text>
            <dbReference type="Rhea" id="RHEA:16969"/>
            <dbReference type="ChEBI" id="CHEBI:57649"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="5.1.3.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.13" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373306.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10145"/>
    <dbReference type="EnsemblBacteria" id="ADO58767">
        <property type="protein sequence ID" value="ADO58767"/>
        <property type="gene ID" value="PPSC2_22670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4801"/>
    <dbReference type="eggNOG" id="COG1898">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090940_1_1_9"/>
    <dbReference type="OMA" id="YRIDRPH"/>
    <dbReference type="OrthoDB" id="1618609at2"/>
    <dbReference type="UniPathway" id="UPA00124"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008830">
        <property type="term" value="F:dTDP-4-dehydrorhamnose 3,5-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019305">
        <property type="term" value="P:dTDP-rhamnose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000888">
        <property type="entry name" value="dTDP_sugar_isom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21047">
        <property type="entry name" value="PTHR21047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00908">
        <property type="entry name" value="dTDP_sugar_isom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01221">
        <property type="entry name" value="rmlC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <feature type="site" description="Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose" evidence="2">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU364069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="20543" checksum="FDAB68BE2C88A2E6" modified="2011-01-11" version="1">MKVIPLKLEGAKIIEPVVHGDHRGFFMESYNEQIMKENGIDHAFIQDNQSLSAEAGVIRGLHYQLNPKAQTKLIRVLSGAIYDVILDIRKSSPTFGQWVGVILSEHNRRQLLVPKGFAHGFCTLVPNTQVLYKVDEYYSPENDRGILWNDPALGIDWPTSHAILSEKDQKHPALVNADINFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAU8</accession>
    <name>E3EAU8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yhcK1</name>
        <name evidence="8" type="ORF">PPSC2_23805</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373548.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11310"/>
    <dbReference type="EnsemblBacteria" id="ADO59012">
        <property type="protein sequence ID" value="ADO59012"/>
        <property type="gene ID" value="PPSC2_23805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5037"/>
    <dbReference type="eggNOG" id="COG3706">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_11_1_9"/>
    <dbReference type="OMA" id="FKQYKFQ"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011620">
        <property type="entry name" value="Sig_transdc_His_kinase_LytS_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07694">
        <property type="entry name" value="5TM-5TMR_LYT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="69"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="105"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="159"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="7">
        <location>
            <begin position="227"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="363" mass="40311" checksum="F0F4A498241E51A6" modified="2011-01-11" version="1">MFSTFFVNTCILVTFLYITGLISQRYKIRLHTLTHKVHWIGGALFGCYGIVIMYYSIPVGFNTIADLRHLAIVATATYIGGPAALMATLFICLGRLLLFGINNQAIVGAVFMLLVGLGCTVLSHLSWSRLPKLMIMNVFALGIIFCPLMINLKNLDDVLHVYPLQFFISMVGGCLLYLIAESINTSNELLLRLEHTSYTDHLTNLSNRRQLEFSLEEQLPQARQRHEHLSVLVLDIDHFKEVNDTYGHAAGDAVLRQLGQILMEKCRANDVVTRSGGEEFTVLLPNCAFRQALRIANQILSGVNQHEFILADGLVLKVTVSIGVTTFPGTGEDMSGAALLEQADKALYEAKKAGRNRVCSYEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBB8</accession>
    <name>E3EBB8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histone acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqkA3</name>
        <name evidence="2" type="ORF">PPSC2_21105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373019.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4501"/>
    <dbReference type="EnsemblBacteria" id="ADO58450">
        <property type="protein sequence ID" value="ADO58450"/>
        <property type="gene ID" value="PPSC2_21105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4487"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096795_0_1_9"/>
    <dbReference type="OMA" id="DHFRKGI"/>
    <dbReference type="OrthoDB" id="1983082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="17187" checksum="0BE6B33FEA2BBF52" modified="2011-01-11" version="1">MVTLCSLEDDDIVSQIWRLQHVAYRLEAELIGFDEIPPLMDTLETLRSCGESFYGWLEDDELLGALAVQSESSGSLTLTRMMVHPDHFRKGIADSLMKHVLNEYQNVPLFIVTTGTLNTPAVTLYRKHGFRPVSAAEVAPGVELTTYHLHNVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBD8</accession>
    <name>E3EBD8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cheW11</name>
        <name evidence="2" type="ORF">PPSC2_21870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373179.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09015"/>
    <dbReference type="EnsemblBacteria" id="ADO58612">
        <property type="protein sequence ID" value="ADO58612"/>
        <property type="gene ID" value="PPSC2_21870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4652"/>
    <dbReference type="eggNOG" id="COG0835">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048995_3_4_9"/>
    <dbReference type="OMA" id="HEGMVTI"/>
    <dbReference type="OrthoDB" id="1711729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039315">
        <property type="entry name" value="CheW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036061">
        <property type="entry name" value="CheW-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002545">
        <property type="entry name" value="CheW-lke_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22617">
        <property type="entry name" value="PTHR22617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01584">
        <property type="entry name" value="CheW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00260">
        <property type="entry name" value="CheW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50341">
        <property type="entry name" value="SSF50341"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50851">
        <property type="entry name" value="CHEW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CheW-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15401" checksum="B0C0F3C7DE6A99FA" modified="2011-01-11" version="1">MSEFIVCSLADKKFALNFLEVEEVMNAKKGTPLPFSEAWHEGMVTIRGDVFTILNLRKKLLLPASSDSSEDKMILLSRAKIALLVDQVEDTASAEDSQLQNNEEEWQRELFPTVMEHRGALIPVIDMDAFLASTKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF0</accession>
    <name>E3EBF0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">alaS3</name>
        <name evidence="4" type="ORF">PPSC2_21930</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373190.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09075"/>
    <dbReference type="EnsemblBacteria" id="ADO58624">
        <property type="protein sequence ID" value="ADO58624"/>
        <property type="gene ID" value="PPSC2_21930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4666"/>
    <dbReference type="eggNOG" id="COG0013">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004485_7_2_9"/>
    <dbReference type="OMA" id="DREFKYD"/>
    <dbReference type="OrthoDB" id="783542at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004813">
        <property type="term" value="F:alanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006419">
        <property type="term" value="P:alanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018165">
        <property type="entry name" value="Ala-tRNA-synth_IIc_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003156">
        <property type="entry name" value="DHHA1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02272">
        <property type="entry name" value="DHHA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="SSF55186"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50860">
        <property type="entry name" value="AA_TRNA_LIGASE_II_ALA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II_ALA" evidence="3">
        <location>
            <begin position="1"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="251"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="391" mass="44114" checksum="02CBD97FAFE5949A" modified="2011-01-11" version="1">MATKLYYTAPNLTEWDTHITQSMERDGAFFVMLEETAFYPHGGGQPCDTGTIQGIRVLDVFLEDGDIWHQVERLPNEGKVACQLDWERRFDHMQQHSGQHLLSAVCLVLLGARTESFHLGQEYATIDVNCSEVTSAQLSAIEQEVNQQIYNNRSIKSYFVTHEQWKDIPLVKMPKVTENIRIVEIEGIEYNACGGTHVAQTGEIGMIKCLKWEKQKGMARIHFKCGARALHDFNDSVRILDVLSAKFNTGRKDILTRFEKWEQEHKQLKAQVELLQEENASYQAKELLSAVQGHVLAYVFEQKSIQEMQQLAAKLTAEHDLLVLFATTAENKIILAHNGTQSVSCGAFLKENLGAFQGKGGGSNQSAQAAFSSRENLLNFFETAQRQFIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF1</accession>
    <name>E3EBF1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD(P)H dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ycaK3</name>
        <name evidence="2" type="ORF">PPSC2_21935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373191.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4679"/>
    <dbReference type="EnsemblBacteria" id="ADO58625">
        <property type="protein sequence ID" value="ADO58625"/>
        <property type="gene ID" value="PPSC2_21935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4667"/>
    <dbReference type="eggNOG" id="COG2249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058643_1_1_9"/>
    <dbReference type="OMA" id="GLLEHAY"/>
    <dbReference type="OrthoDB" id="1143659at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="21670" checksum="EBBD10899900299A" modified="2011-01-11" version="1">MKFLLVVTHPREDSLTLAVMTRFVEGLKENKHEVDILDLDRDGYNPVYSAADELDWNTTHKQYAPETRKEMDRIAAADALVFVFPLWWYSVPSMLKGYLDKVWNKGLLQEFTTKQVLWMCLAGGTKEHLVNYEYHDLVTNYLNKAIAGYARVRESKVEFFYDTLSESKEYIVGLLEHAYQLGLAYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBG8</accession>
    <name>E3EBG8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Histidine kinase</fullName>
            <ecNumber evidence="1">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ydfH3</name>
        <name evidence="6" type="ORF">PPSC2_22015</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.13.3" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373208.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09165"/>
    <dbReference type="EnsemblBacteria" id="ADO58642">
        <property type="protein sequence ID" value="ADO58642"/>
        <property type="gene ID" value="PPSC2_22015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4682"/>
    <dbReference type="eggNOG" id="COG4585">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_20_15_9"/>
    <dbReference type="OMA" id="MIVIITY"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011712">
        <property type="entry name" value="Sig_transdc_His_kin_sub3_dim/P"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07730">
        <property type="entry name" value="HisKA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="33"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="59"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="84"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="110"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="133"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="157"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="HisKA_3" evidence="5">
        <location>
            <begin position="210"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="HATPase_c" evidence="4">
        <location>
            <begin position="323"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="414" mass="46498" checksum="C44E6DF5B819CF81" modified="2011-01-11" version="1">MNDASNVQVQNLNPETSESKSEGEVENKDISKILTIIWVFIIYSESVILQHLFGGLNLLQSSLFTIIIILHILLYLHAHRVAKYFSWAYFVIQGGLIFASAFLLPESFSIVLVGLMPVLVGQSIGIYYKPLKVILVFLISYVLFCVAVVSHNDGRQFVLFIPLFFLIVVVIVAYAVLFLKQVKARIRTQNVLKELEIAHQKVEELTIANERQRMARDLHDTLAQGLAGLIMQLEAIDAHLSKGSTQRAQEIVQQSMSQVRRTLSDSRRAIDNLRSKTISEVDFAEAVEEEIQRFTMATSIRVIRNIKIKTSVPRLLFEHGLFIISECLTNVAKHSHANTVWINILDNEGKIEIEIRDDGKGFDTDIIAKQTGHYGIIGIHERVRMLGGNININSILQAGTAIKIEAPLTKGDLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBJ0</accession>
    <name>E3EBJ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Erythromycin esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ereB5</name>
        <name evidence="2" type="ORF">PPSC2_22095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373230.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4721"/>
    <dbReference type="EnsemblBacteria" id="ADO58664">
        <property type="protein sequence ID" value="ADO58664"/>
        <property type="gene ID" value="PPSC2_22095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4704"/>
    <dbReference type="eggNOG" id="COG2312">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026490_2_0_9"/>
    <dbReference type="OMA" id="QNARIIE"/>
    <dbReference type="OrthoDB" id="1068352at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14728">
        <property type="entry name" value="Ere-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007815">
        <property type="entry name" value="Emycin_Estase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014622">
        <property type="entry name" value="UCP036794_erythomycin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05139">
        <property type="entry name" value="Erythro_esteras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036794">
        <property type="entry name" value="UCP_erythr_ester"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168118" evidence="1">
        <location>
            <begin position="26"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="444" mass="50271" checksum="E60C2273E354F1B2" modified="2011-01-11" version="1">MKKKMIIALGVSAIIVTNFVGSTYADSKTGVSVTAPYNTNQIAEWLEMHAKPLKTTNPTASFNDLKPLKNMVGSASIVGLGEATHGAHEIFTMKQRIVNFLVSEKGFTNLVLEEGWDRALELDRYVLTGKGNPSQHLSPEFNTKEMLDLLSWIRQYNANPKHKSKVRIIGMDIQSVNENVYNNIREYIKRNNSDLVPRVEEKIKGLIPVTKDMNTFESLTKEEKEKYISDAKQISALLEQNKSYLNGKSKEFAWIKQNARIIEQFTTMLGGTSPDKPSDFYLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMIPFIYPKVAGQHLAEYYGKRYVSIGTSVYKGQYNVYNNDGKFGPYGILKSDDPNSYNYIFGQVKKDQFFIDLRKANGVTKTWLNEQHQIFAGITKEGPGIPKTVDISLGKTFDILVQIQKVSPSQLHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBP3</accession>
    <name>E3EBP3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Competence protein ComF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">comFA</name>
        <name evidence="3" type="ORF">PPSC2_23085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373399.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10570"/>
    <dbReference type="EnsemblBacteria" id="ADO58861">
        <property type="protein sequence ID" value="ADO58861"/>
        <property type="gene ID" value="PPSC2_23085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4890"/>
    <dbReference type="eggNOG" id="COG4098">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024742_3_0_9"/>
    <dbReference type="OMA" id="PYHNDPM"/>
    <dbReference type="OrthoDB" id="880785at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="370"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="555"/>
            <end position="706"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="706" mass="78845" checksum="85F60617F538A5F0" modified="2011-01-11" version="1">MKIAVYAVRYKGKWNLRLSVDIRVDMTWWLRKVKDQENAVERWVLLGDELPLSWGVSLCGRFKGLAEMERWGDRQWWAYILSQLKNELVLESSNGERILSGGVENICIWDRQQGWISRTKHGNEGRETIGTVRSIQNRKLATGVDGLDMEGLTGQANELTHLLAGRQLLVPEAEALLAEAAPDLEHTWRSAAQLAYLQGRLSFAAGLAPAPRARWSAARRHELRCNRCGSGKVHRTSCASCGRKACAYCETCLTLGRSRECSLLLRGTAKPAMPRVAEVTPAANLDRWGLSPAQRAAAEVALRFLAAPPRRVRKCSRSEGQWQRARELFRRSMRVRQELGAAAAHGSTLALNEQSSSKSGERAWGIAGRQLPDSAAKRFLLWAVTGAGKTEMMFPLLQHVLERGGTALVATPRRDVVLELVPRLAVAFPQVSMVTLYGGSAERWQRGQLTLATTHQLLRYRQAFDLVVIDEIDAFPYHNDPMLAFAAQAVCKQEGKFIFLSATPPRPLQKEAARGQLPHAKVPVRFHRHPLPVPIRLGTASVHHWLQKGQLPASFIQHLYISIQRGAQVFLFVTRISHIQGLVELLIRQLPDIPIAGTSSQDEERTAKVRLFRGTEIRVLVTTTILERGVTVPRSDVYILDADSSLFDEASLVQMAGRAGRSKDDPCGSVIFISPQWTSGQKRAIKQIKRMNALARKKGYLKVMKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBT1</accession>
    <name>E3EBT1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373590.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59055">
        <property type="protein sequence ID" value="ADO59055"/>
        <property type="gene ID" value="PPSC2_24000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5078"/>
    <dbReference type="eggNOG" id="COG3597">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116223_0_0_9"/>
    <dbReference type="OMA" id="INEKGAM"/>
    <dbReference type="OrthoDB" id="1686187at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="163"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="21353" checksum="40CD2EAD143EA528" modified="2011-01-11" version="1">MTTRTIEELEQIRKECKSMVTRRAAASGGAVLVPIPGADVLADVGILMQLLPAINEKFGLSEQQLDGLDAETKSMVYGFITSIGSKLIGRLITREAIVKILQKMGIRIATKQVSKFVPLLGQGLAAAIGFTAMRTIGNRHIDECYEVAKRLLEQQTAADTARNWTVPQQPLDPVGVDKLPNQNPEAAIPLLPASHKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC02</accession>
    <name>E3EC02_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">xylB3</name>
        <name evidence="4" type="ORF">PPSC2_24315</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 43 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373660.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5188"/>
    <dbReference type="CAZy" id="GH43">
        <property type="family name" value="Glycoside Hydrolase Family 43"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59126">
        <property type="protein sequence ID" value="ADO59126"/>
        <property type="gene ID" value="PPSC2_24315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5148"/>
    <dbReference type="eggNOG" id="COG3507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077624_0_0_9"/>
    <dbReference type="OrthoDB" id="442641at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006710">
        <property type="entry name" value="Glyco_hydro_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04616">
        <property type="entry name" value="Glyco_hydro_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity, responsible for pKa modulation of the active site Glu and correct orientation of both the proton donor and substrate" evidence="3">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="238" mass="26821" checksum="CE5623BDD0AA25D9" modified="2011-01-11" version="1">MATLRYTNPVVPGFYPDPSVIRVGEDYYMATSSFEYMPGLPIFHSRNLTDWRQIGHALNRRSQMDLSTRKSSEGIYAPTLRYHQGVFYLITTDVMGIGNFYITSVNPVGPWSDPIRIPYGNIDPSLLFDDDGKVYVTVQSGADAESHIIQYELDIATGQALTEPVAIAHGDGGVWTEGPHLYHIGSRYYLLCACGGTGRDHRTLVYRANSLYGPFERMKEPMLQNEYPNLCRQENPLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC33</accession>
    <name>E3EC33_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S18</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rpsR</name>
        <name evidence="7" type="ORF">PPSC2_25425</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the bacterial ribosomal protein bS18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013312800.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12920"/>
    <dbReference type="EnsemblBacteria" id="ADO59373">
        <property type="protein sequence ID" value="ADO59373"/>
        <property type="gene ID" value="PPSC2_25425"/>
    </dbReference>
    <dbReference type="GeneID" id="66574983"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5388"/>
    <dbReference type="eggNOG" id="COG0238">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_148710_2_2_9"/>
    <dbReference type="OMA" id="QKKYCRF"/>
    <dbReference type="OrthoDB" id="1940575at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00270">
        <property type="entry name" value="Ribosomal_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001648">
        <property type="entry name" value="Ribosomal_S18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018275">
        <property type="entry name" value="Ribosomal_S18_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036870">
        <property type="entry name" value="Ribosomal_S18_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13479">
        <property type="entry name" value="PTHR13479"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01084">
        <property type="entry name" value="Ribosomal_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00974">
        <property type="entry name" value="RIBOSOMALS18"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46911">
        <property type="entry name" value="SSF46911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00165">
        <property type="entry name" value="S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00057">
        <property type="entry name" value="RIBOSOMAL_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10556" checksum="2AC6F234CD700565" modified="2011-01-11" version="1">MGFRQREGGDDNKRPARRGGRNKRRKVCFFTVNKITHIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRMLTIAVKRSRQIALLPYTTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECA9</accession>
    <name>E3ECA9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable phosphoketolase</fullName>
            <ecNumber evidence="5">4.1.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">xfp</name>
        <name evidence="8" type="ORF">PPSC2_01320</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the XFP family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.-" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368894.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14040"/>
    <dbReference type="EnsemblBacteria" id="ADO54252">
        <property type="protein sequence ID" value="ADO54252"/>
        <property type="gene ID" value="PPSC2_01320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.260"/>
    <dbReference type="eggNOG" id="COG3957">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013954_2_0_9"/>
    <dbReference type="OMA" id="LSTMDHC"/>
    <dbReference type="OrthoDB" id="45239at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016832">
        <property type="term" value="F:aldehyde-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01403">
        <property type="entry name" value="Phosphoketolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023962">
        <property type="entry name" value="Phosphoketolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005593">
        <property type="entry name" value="Xul5P/Fru6P_PKetolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018969">
        <property type="entry name" value="Xul5P/Fru6P_PKetolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019790">
        <property type="entry name" value="Xul5P/Fru6P_PKetolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018970">
        <property type="entry name" value="Xul5P/Fru6P_PKetolase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019789">
        <property type="entry name" value="Xul5P/Fru6P_PKetolase_ThDP_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31273">
        <property type="entry name" value="PTHR31273"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03894">
        <property type="entry name" value="XFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09363">
        <property type="entry name" value="XFP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09364">
        <property type="entry name" value="XFP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017245">
        <property type="entry name" value="Phosphoketolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS60002">
        <property type="entry name" value="PHOSPHOKETOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS60003">
        <property type="entry name" value="PHOSPHOKETOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="XFP_N" evidence="7">
        <location>
            <begin position="12"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="XFP_C" evidence="6">
        <location>
            <begin position="591"/>
            <end position="790"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF09363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF09364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="794" mass="89546" checksum="4B77967224AFC924" modified="2011-01-11" version="1">MALTPVLAEYSSQTYLKKLDAYWRATNYISVGQLYLKDNPLLREPLKDSDVKVKPIGHWGTIPGQNFIYAHLNRVINKYDLNMLYIEGPGHGGQVMVSNSYLDGSYTEIYPQITQDIPGMKKLFKQFSFPGGIASHAAPETPGSIHEGGELGYSLSHGVGAILDNPNLISAVVIGDGEAETGPLAASWFSNRFINPITDGAVLPILHLNGFKISNPTIMSRQSKEELTSFFKGLGWEPFFVEGEDPDHMHPEMAKVLDTAIEKIEAIQKNARENNDLTRPAWPVLIFRSPKGWTGPKEWDGVPNTNSFRAHQVPIPVDQKNMQHAPALLEWLNSYRPEELFDENGRLKAEIAEILPTGEKRMGMNPVANAGNLIKDLKLPDFRNYALDNSTPGKVIAQDMSVLGKYVKDVVVLNEENRNFRIFGPDETMSNRLAPVFEVTKRQWMDQIIEPNDEFLSSYGRVIDSQLSEHQAEGLLEGYVLTGRHGFFASYEAFLRVVDSMITQHFKWLRKATDQGWRADIPSLNVVATSTVFQQDHNGYTHQDPGLLGHLADKKPEFIREYLPADANSLLAVFDTILNDRQKINLVVSSKHPRPQWFSADEAKELVDKGLKIIDWASTDQGGEPDIVIASAGTEPTIESLAAISILHKKLPDLKIRYINVVDLLKLRSQKLDPRGLSDAEFDQFFTKDKPVVFAFHGYEGLIKDLFFDRHNHNLHVHGYRENGDITTPFDMRVLNQMDRFDLVKEAVLNLPDAGKYANIADEMDAMVKKHHQFIREEGIDLPEVENWVWEGLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECU0</accession>
    <name>E3ECU0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NreA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nreA1</name>
        <name evidence="2" type="ORF">PPSC2_02075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369024.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14840"/>
    <dbReference type="EnsemblBacteria" id="ADO54384">
        <property type="protein sequence ID" value="ADO54384"/>
        <property type="gene ID" value="PPSC2_02075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.393"/>
    <dbReference type="eggNOG" id="COG3605">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1747834_0_0_9"/>
    <dbReference type="OMA" id="RQECALM"/>
    <dbReference type="OrthoDB" id="1501495at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13185">
        <property type="entry name" value="GAF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GAF" evidence="1">
        <location>
            <begin position="14"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="16299" checksum="D4326D027B13B7FA" modified="2011-01-11" version="1">MLQITDEMRNELNQLRDHVHGDLTALAFMSRSGGKLHWYYASGSRNNRYRLISFKVGHGIAGMAVRLGRTVTVSALISGSIRLRQECALMLAEQLHSAVAIPFSSTGDLPNGVLLVGNREVRTFTESDVAKATQVAHRLGQLCALPLTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECU9</accession>
    <name>E3ECU9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">GMP synthase [glutamine-hydrolyzing]</fullName>
            <ecNumber evidence="9">6.3.5.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">GMP synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Glutamine amidotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">guaA</name>
        <name evidence="12" type="synonym">guaA3</name>
        <name evidence="12" type="ORF">PPSC2_04135</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Catalyzes the synthesis of GMP from XMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + H2O + L-glutamine + XMP = AMP + diphosphate + GMP + 2 H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:11680"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.5.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Purine metabolism; GMP biosynthesis; GMP from XMP (L-Gln route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.2" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369453.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16935"/>
    <dbReference type="EnsemblBacteria" id="ADO54818">
        <property type="protein sequence ID" value="ADO54818"/>
        <property type="gene ID" value="PPSC2_04135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.824"/>
    <dbReference type="eggNOG" id="COG0519">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014340_0_5_9"/>
    <dbReference type="OMA" id="KRKIIGH"/>
    <dbReference type="OrthoDB" id="504464at2"/>
    <dbReference type="UniPathway" id="UPA00189">
        <property type="reaction ID" value="UER00296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016462">
        <property type="term" value="F:pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01742">
        <property type="entry name" value="GATase1_GMP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01997">
        <property type="entry name" value="GMP_synthase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00344">
        <property type="entry name" value="GMP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001674">
        <property type="entry name" value="GMP_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004739">
        <property type="entry name" value="GMP_synth_GATase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022955">
        <property type="entry name" value="GMP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025777">
        <property type="entry name" value="GMPS_ATP_PPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022310">
        <property type="entry name" value="NAD/GMP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00958">
        <property type="entry name" value="GMP_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02540">
        <property type="entry name" value="NAD_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00884">
        <property type="entry name" value="guaA_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00888">
        <property type="entry name" value="guaA_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51553">
        <property type="entry name" value="GMPS_ATP_PPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="5 9 10" id="KW-0332">GMP biosynthesis</keyword>
    <keyword evidence="3 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMPS ATP-PPase" evidence="11">
        <location>
            <begin position="198"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="9">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="225"/>
            <end position="231"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="512" mass="57289" checksum="E2D62182F38908F2" modified="2011-01-11" version="1">MNKPNEIVVVLDFGGQYNQLIARRIRDLGVYSELLPYNTPAEKLRELAPKGIVFSGGPSSVYTDNAPQVDRAIYDLGIPIFGICYGMQLMAHQLDGKVERAGKREYGKADVQFNEGARLTKGLDSRQTVWMSHGDHVTDLPTGFTLDAGTESAPIAAMSNLERNLYAVQFHPEVRHSVQGNEMISNFLYEVCGCEGNWTMESFIEEQIREIRQQVGDKKVLCALSGGVDSSVVAMLIHRAIGDQLTCMFIDHGLLRKGEAESVMETFVGKFDMKVVKIDARERFLSKLAGVDDPEQKRKIIGNEFIYVFEEESAKFDDFDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMKFKLIEPLNALFKDEVRKVGEECGLPAEIVWRQPFPGPGLAIRVLGEVTEDKLKIVRDSDFILREEIAKAGLDREIWQYFTALPNMKSVGVMGDARTYSYTVGIRAVTSIDGMTADWARIPWDVLEKISVRIVNEVDNVNRIVYDVTSKPPATIEWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECX6</accession>
    <name>E3ECX6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phosphoribosylglycinamide formyltransferase</fullName>
            <ecNumber evidence="2">2.1.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">5'-phosphoribosylglycinamide transformylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">GAR transformylase</fullName>
            <shortName evidence="2">GART</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">purN</name>
        <name evidence="4" type="ORF">PPSC2_04260</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(6S)-10-formyltetrahydrofolate + N(1)-(5-phospho-beta-D-ribosyl)glycinamide = (6S)-5,6,7,8-tetrahydrofolate + H(+) + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide</text>
            <dbReference type="Rhea" id="RHEA:15053"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:143788"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="EC" id="2.1.2.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Purine metabolism; IMP biosynthesis via de novo pathway; N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide from N(1)-(5-phospho-D-ribosyl)glycinamide (10-formyl THF route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GART family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.2" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369479.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17070"/>
    <dbReference type="EnsemblBacteria" id="ADO54845">
        <property type="protein sequence ID" value="ADO54845"/>
        <property type="gene ID" value="PPSC2_04260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.849"/>
    <dbReference type="eggNOG" id="COG0299">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038395_1_3_9"/>
    <dbReference type="OMA" id="TGITIHY"/>
    <dbReference type="OrthoDB" id="1815747at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00126"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004644">
        <property type="term" value="F:phosphoribosylglycinamide formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd08645">
        <property type="entry name" value="FMT_core_GART"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01930">
        <property type="entry name" value="PurN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004607">
        <property type="entry name" value="GART"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00639">
        <property type="entry name" value="PurN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Formyl_trans_N" evidence="3">
        <location>
            <begin position="5"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="5'-phosphoribosylglycinamide binding" evidence="2">
        <location>
            <begin position="14"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="region of interest" description="10-formyltetrahydrofolate binding" evidence="2">
        <location>
            <begin position="93"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>(6S)-10-formyltetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>(6S)-10-formyltetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
        </ligand>
    </feature>
    <feature type="site" description="Raises pKa of active site His" evidence="2">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="21799" checksum="E6E0D8038BA70F10" modified="2011-01-11" version="1">MNEYRIAVFASGEGTNFQSLVDAAARGELGGASVELLICDKPGAPAVARAQKAGIACHTFRPKDYPAREDYERELVALLEQKSIDLIVLAGYMRLLSSVMVDAYAGKIINIHPSLLPAFPGKDAIGQALAYGVKVSGVTVHFVDGGMDTGAIIAQRVVEVHDHDTAESLSVAIQSVERQLYPEVVGRLAQGKIQLNGRKVNSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECY8</accession>
    <name>E3ECY8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Histidine kinase</fullName>
            <ecNumber evidence="3">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">citS</name>
        <name evidence="16" type="ORF">PPSC2_04320</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54857.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599490.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17130"/>
    <dbReference type="EnsemblBacteria" id="ADO54857">
        <property type="protein sequence ID" value="ADO54857"/>
        <property type="gene ID" value="PPSC2_04320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.861"/>
    <dbReference type="eggNOG" id="COG3290">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020211_11_2_9"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033463">
        <property type="entry name" value="sCache_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016120">
        <property type="entry name" value="Sig_transdc_His_kin_SpoOB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039506">
        <property type="entry name" value="SPOB_a"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17203">
        <property type="entry name" value="sCache_3_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14689">
        <property type="entry name" value="SPOB_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55890">
        <property type="entry name" value="SSF55890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 16" id="KW-0418">Kinase</keyword>
    <keyword evidence="13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="12" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="172"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="15">
        <location>
            <begin position="209"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="14">
        <location>
            <begin position="437"/>
            <end position="543"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO54857.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="558" mass="61787" checksum="813E81B99E5CABAD" modified="2015-05-27" version="2">MRFQTKLMVFISLLVLVVTGLLGLSLRYMITSALYEEIGKRALTVANTLAVDAQVRDALEQTDTTQLRARINEAVKPVQASSGADFITIADRHLIRQWHVNPERIGQPMMDPLNTKVLQGQSFITESTGSLGPSLRAKTAVYNEQGQAIGLVSVGFLMTDVAQNIRTYTYTWLWFMIGALMIGILGSLVIARRVRRELHGLEPVEIGRLYQEKQAILESIGEGIIAVNSSGQVTLANPQAVRLLGLPPETSLYGCELRHLADAADQLADVLATDFIEKNPSMKPDQEQNVFNEEIEIQQRVVVVSRVPIKDRFGRILGTVASLRDKTELLRMTRQLTEVKDYADVLRSQTHEYTNRLYLISGLIQLECYDEAVDFITQESEEYRVHRSVSSSLSPDSIIASLLISKKKQALEKGIVLHSYIKGAFSTPSPTLEWSLLAAIAGNLLDNAMEAVAIGSIPDRQVWFRLEEMTEAIIVEVADNGSGISEDIQEKLFVKGASTKAEAGHGYGLALVQEYTERMSGSIKAHERPGGGSIFEVYIPLNRTDTRINNAKGGYVHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED88</accession>
    <name>E3ED88_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">2', 3'-cyclic nucleotide 2'-phosphodiesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cpdB1</name>
        <name evidence="11" type="ORF">PPSC2_02370</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a nucleoside 2',3'-cyclic phosphate + H2O = a nucleoside 3'-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19621"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:66949"/>
            <dbReference type="ChEBI" id="CHEBI:66954"/>
            <dbReference type="EC" id="3.1.4.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a ribonucleoside 3'-phosphate + H2O = a ribonucleoside + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10144"/>
            <dbReference type="ChEBI" id="CHEBI:13197"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18254"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="3.1.3.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 7">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369085.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15135"/>
    <dbReference type="EnsemblBacteria" id="ADO54445">
        <property type="protein sequence ID" value="ADO54445"/>
        <property type="gene ID" value="PPSC2_02370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.455"/>
    <dbReference type="eggNOG" id="COG0737">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005854_4_1_9"/>
    <dbReference type="OMA" id="NAQLWYA"/>
    <dbReference type="OrthoDB" id="1884225at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008663">
        <property type="term" value="F:2',3'-cyclic-nucleotide 2'-phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008254">
        <property type="term" value="F:3'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07410">
        <property type="entry name" value="MPP_CpdB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006146">
        <property type="entry name" value="5'-Nucleotdase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041827">
        <property type="entry name" value="CpdB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00785">
        <property type="entry name" value="5_NUCLEOTIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00786">
        <property type="entry name" value="5_NUCLEOTIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005127771" evidence="7">
        <location>
            <begin position="31"/>
            <end position="700"/>
        </location>
    </feature>
    <feature type="domain" description="Metallophos" evidence="9">
        <location>
            <begin position="42"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="5_nucleotid_C" evidence="10">
        <location>
            <begin position="378"/>
            <end position="568"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="660"/>
            <end position="700"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="700" mass="76998" checksum="EDC4CED3F026AEFC" modified="2011-01-11" version="1">MLFRKNWFKGFTAVVVACSLLVFSAAPSWAASDSRYSATVNLRIMETTDIHGALMNYDYYSDKETNEYGLIRTAGLIQQARSETRNSMLFDNGDLLQGNPLGDYMARNKTFEKEGGVHPVYKMMNLMGYDAATVGNHEFNYGLDFLDKSLKGADFPYVNANVYVDNEGQATKNYFTPYQILDKKVTDEKGEEHTLRVGVIGLVTPQIMQWDEANLKDKVVTKDIVETAKKFIPQMKTEGADIIVVLAHTGYEDVPQTPMMENAVKYLSQVDGINAILFGHAHKSFPGPDFKDMKGVDLDKGTINDVPAVEASSWGKDLGIIDLSLEKRNREWHVINSQSQVRPVVSTTNQAVKFTPEFKLVDAIKGEHQGTLDYIRQPVGTTTAPITSYFALVQDDPSIQIVTNAQKWYVQNHLKGTEYENLPVLSAGAPFKAGGRNGAEYYTNIPEGTIAIKNVSDLYVYPNTVHAVEVTGAEIQEWLEWSAGQFNRIDPSKTEEQSLINKDFPTYNFDVIDGVNYQIDVTQPARYDAKGTIIDSSAHRIKDLQYNGKAIDPAQKFIVATNNYRASSSKLANPDGKRIVMAAPDESRQVVVDYIRTNGTINPSADGNWSIAPFGQAKVTFESSPDAKDVLAGNQQISYLSSAADGFAKYSLKADAKPSAATTSVKEAAAPAKATAKPAVKTTKPAAAKPAKTTKPKASK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDB6</accession>
    <name>E3EDB6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">tRNA-dihydrouridine synthase</fullName>
            <ecNumber evidence="10">1.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">yfjN</name>
        <name evidence="13" type="ORF">PPSC2_04480</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 10">Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a 5,6-dihydrouridine in tRNA + NAD(+) = a uridine in tRNA + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:54452"/>
            <dbReference type="Rhea" id="RHEA-COMP:13339"/>
            <dbReference type="Rhea" id="RHEA-COMP:13887"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74443"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 5,6-dihydrouridine in tRNA + NADP(+) = a uridine in tRNA + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:23624"/>
            <dbReference type="Rhea" id="RHEA-COMP:13339"/>
            <dbReference type="Rhea" id="RHEA-COMP:13887"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74443"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 10">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the dus family.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369528.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17315"/>
    <dbReference type="EnsemblBacteria" id="ADO54895">
        <property type="protein sequence ID" value="ADO54895"/>
        <property type="gene ID" value="PPSC2_04480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.898"/>
    <dbReference type="eggNOG" id="COG0042">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013299_0_3_9"/>
    <dbReference type="OMA" id="LIYPYVD"/>
    <dbReference type="OrthoDB" id="1710586at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017150">
        <property type="term" value="F:tRNA dihydrouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02801">
        <property type="entry name" value="DUS_like_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035587">
        <property type="entry name" value="DUS-like_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001269">
        <property type="entry name" value="DUS_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024036">
        <property type="entry name" value="tRNA-dHydroUridine_Synthase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018517">
        <property type="entry name" value="tRNA_hU_synthase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01207">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006621">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01136">
        <property type="entry name" value="UPF0034"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6 10" id="KW-0288">FMN</keyword>
    <keyword evidence="9 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="7 10" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Dus" evidence="12">
        <location>
            <begin position="15"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="11">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00002790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR006621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR006621-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="37445" checksum="78040EEC4BE47F9A" modified="2011-01-11" version="1">MMNNFWRELPRPFFILAPMEDVTDVVFRHVVSEAARPDVFFTEFANTESYCHPEGNKSVRGRLTFTEDEQPMVAHIWGDKPEYFREMSIGMAKEGFKGIDINMGCPVANVAENGKGSGLICRPEIAADIIQAAKAGGLPVSVKTRLGFTAVDEWRDWLTHILKQDIVNLSIHLRTREEMSKVDAHWELIPEIKKLRDEVAPDTLLTINGDIPDRQTGLKLAEQYGVDGIMIGRGIFQNPFAFEKEPKEHSSEELLELLRLHLDLHDHYSAQEPRSFSPLARFFKIYVRGFRGASELRNSLMNAKSTSEVRTLLDEFGSKDHDEVEERGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDG9</accession>
    <name>E3EDG9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">M1-1085</name>
        <name evidence="9" type="ORF">PPSC2_04735</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369581.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17630"/>
    <dbReference type="EnsemblBacteria" id="ADO54948">
        <property type="protein sequence ID" value="ADO54948"/>
        <property type="gene ID" value="PPSC2_04735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.951"/>
    <dbReference type="eggNOG" id="COG1122">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_86_7_9"/>
    <dbReference type="OMA" id="MYRGEQV"/>
    <dbReference type="OrthoDB" id="870493at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd03225">
        <property type="entry name" value="ABC_cobalt_CbiO_domain1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015856">
        <property type="entry name" value="ABC_transpr_CbiO/EcfA_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="12"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="278"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="250"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="44"/>
            <end position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="310"/>
            <end position="317"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="494" mass="55423" checksum="60B65F569CA5F793" modified="2011-01-11" version="1">MSPANEDVVASITRLRLKFPGEQELLFHNMSLSVRKGEKLLLLGPSGCGKSTLLQVLSGLIPRTIEVPMKYDAAVIPSLSGIVFQDPDTQFCMSYADEELAFVLENKQVPREQMPSRIRELLMQVGLPTDDIHLPIASMSQGMKQRLAIASVLAMEPEVLFLDEPTALLDEEGTTQVWDTIRNISADQTLVIVEHKINKIVQDVDRIVVLSDQGEMIADGRAEDVFHVHRQALSEYGVWYPGIWDESSSPRWRESVTQQKDGGHTDSPSTSAPTTDLLELEHFSGLRGLSTVIYVEQAQVKPGDWIGVVGENGAGKSSLLLSMMRLLHTQGRYCVCGAEAGNTEQLAERIGFAFQNPELQFVANTVRRELEYSLPKSLFTAEQCRERVDRMLIQFGLERLDERHPYQLSLGQKRRLSIATAMIREPEVLLLDEPTFGQDARNTFVMLDMLEQLRAAGTAIVMVTHDPEIVRRYCTDVWRIQKGELQYEPVLSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDR4</accession>
    <name>E3EDR4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glx2</name>
        <name evidence="2" type="ORF">PPSC2_06705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370003.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1393"/>
    <dbReference type="EnsemblBacteria" id="ADO55372">
        <property type="protein sequence ID" value="ADO55372"/>
        <property type="gene ID" value="PPSC2_06705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1380"/>
    <dbReference type="eggNOG" id="COG0491">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030571_2_1_9"/>
    <dbReference type="OMA" id="FCLDIEK"/>
    <dbReference type="OrthoDB" id="733552at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="22"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="27108" checksum="5E663877566B9491" modified="2011-01-11" version="1">MNIGTQILILEVSMGPFFGNSIIHPVLLKDEDGLTLIDSGMLGQLEPLRKAISDVGEDISRLKRIIITHQDIDHIGNVQALLDLLPNTALLAHKDDIPYMTGERPFIKLTPERINLMEPALKQQAEDMIRHLPDLRFAHILEDGEHLPYGGGIQIIHTPGHTPGHISLYVPAQKLLLAADELRVVEGELVGPAESATPDMPLALKSLDKLTVLDVDKVLCYHGGYYDHNVQARLQALSQSREKTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS3</accession>
    <name>E3EDS3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9 10">Chromosomal replication initiator protein DnaA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 14" type="primary">dnaA</name>
        <name evidence="14" type="ORF">PPSC2_00005</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10">Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 11">Belongs to the DnaA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368644.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EDS3"/>
    <dbReference type="STRING" id="1406.LK13_13020"/>
    <dbReference type="EnsemblBacteria" id="ADO53989">
        <property type="protein sequence ID" value="ADO53989"/>
        <property type="gene ID" value="PPSC2_00005"/>
    </dbReference>
    <dbReference type="GeneID" id="66574963"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1"/>
    <dbReference type="eggNOG" id="COG0593">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026910_3_1_9"/>
    <dbReference type="OMA" id="REFNPLF"/>
    <dbReference type="OrthoDB" id="219876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003688">
        <property type="term" value="F:DNA replication origin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006275">
        <property type="term" value="P:regulation of DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06571">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1750.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00377">
        <property type="entry name" value="DnaA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001957">
        <property type="entry name" value="Chromosome_initiator_DnaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020591">
        <property type="entry name" value="Chromosome_initiator_DnaA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018312">
        <property type="entry name" value="Chromosome_initiator_DnaA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013317">
        <property type="entry name" value="DnaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013159">
        <property type="entry name" value="DnaA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024633">
        <property type="entry name" value="DnaA_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038454">
        <property type="entry name" value="DnaA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30050:SF2">
        <property type="entry name" value="PTHR30050:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00308">
        <property type="entry name" value="Bac_DnaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08299">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11638">
        <property type="entry name" value="DnaA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00051">
        <property type="entry name" value="DNAA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00760">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00362">
        <property type="entry name" value="DnaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01008">
        <property type="entry name" value="DNAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9 10" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 9 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="12">
        <location>
            <begin position="142"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_DnaA_C" evidence="13">
        <location>
            <begin position="354"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="150"/>
            <end position="157"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO53989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="448" mass="51135" checksum="C65483029CE77F7A" modified="2011-01-11" version="1">MDSHTSELWQQILSIIQTKLSKPSYDTWFKATKAAKLNDHSIVISAPTTFAVEWLESRYTKLVGATVYEILGKHLEVKFVIEENKPAEVDLQQQPQQQPVVQEEAVSHMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFLYGGVGLGKTHLMHAIGHYILEHNPTSKVVYLSSEKFTNEFINAIRDNRGESFRNKYRNIDILLIDDIQFIAGKESTQEEFFHTFNALHEERKQIIISSDRPPKEIPTLEERLRSRFEWGLITDIQPPDLETRIAILRKKARAENLDIPNEAMMYIANQIDTNIRELEGALIRVVAYSSLTNQDVSSHLAAEALKDIIPSSRPKMITIQDIQHQVGEFYNLRLEDFKARKRTKAVAFPRQIAMYLSRELTDYSLPKIGEAFGGRDHTTVIHAHEKISKSIQVDQDLFKVINNLIEKIKNPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDU6</accession>
    <name>E3EDU6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal RNA small subunit methyltransferase I</fullName>
            <ecNumber evidence="6">2.1.1.198</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">16S rRNA 2'-O-ribose C1402 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">rRNA (cytidine-2'-O-)-methyltransferase RsmI</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rsmI</name>
        <name evidence="8" type="synonym">M1-172</name>
        <name evidence="8" type="ORF">PPSC2_00120</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>cytidine(1402) in 16S rRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(1402) in 16S rRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42924"/>
            <dbReference type="Rhea" id="RHEA-COMP:10285"/>
            <dbReference type="Rhea" id="RHEA-COMP:10286"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74495"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.198"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyltransferase superfamily. RsmI family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.198" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368665.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13135"/>
    <dbReference type="EnsemblBacteria" id="ADO54012">
        <property type="protein sequence ID" value="ADO54012"/>
        <property type="gene ID" value="PPSC2_00120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.23"/>
    <dbReference type="eggNOG" id="COG0313">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044779_1_0_9"/>
    <dbReference type="OMA" id="RTMVFFE"/>
    <dbReference type="OrthoDB" id="1059309at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070677">
        <property type="term" value="F:rRNA (cytosine-2'-O-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000453">
        <property type="term" value="P:enzyme-directed rRNA 2'-O-methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11648">
        <property type="entry name" value="RsmI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01877">
        <property type="entry name" value="16SrRNA_methyltr_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008189">
        <property type="entry name" value="rRNA_ssu_MeTfrase_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018063">
        <property type="entry name" value="SAM_MeTrfase_RsmI_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46111">
        <property type="entry name" value="PTHR46111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005917">
        <property type="entry name" value="MTase_YraL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00096">
        <property type="entry name" value="TIGR00096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01296">
        <property type="entry name" value="RSMI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="7">
        <location>
            <begin position="18"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="32874" checksum="11D8F9F9BA482731" modified="2011-01-11" version="1">MTAAVQKSFSNREEERGKLYLVATPIGNLDDMTFRAINTLKSCNIIAAEDTRQTRKLLTHFDITPDMLFSYHEHNKAASGPELIRYIIEGKNLALVSDAGLPAISDPGSDLVKLALEAEISVIPIPGANAALSALIASGLDTERFTFAGFPPREKKDLEKLLLSFQVSHGTILFYESPHRIVRTLTVLKETLGSRKVVLARELTKLHEEWVRGTVEQCLAKLEENPPLGEYCLIVEGKNEEEEEQERQAWWQDLSLESHVAHYESEGLTRKDAMKRTATDRSISKRDVYNALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDY4</accession>
    <name>E3EDY4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Type III pantothenate kinase</fullName>
            <ecNumber evidence="6">2.7.1.33</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">PanK-III</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Pantothenic acid kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">coaX</name>
        <name evidence="7" type="synonym">panK</name>
        <name evidence="7" type="ORF">PPSC2_00305</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>(R)-pantothenate + ATP = (R)-4'-phosphopantothenate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16373"/>
            <dbReference type="ChEBI" id="CHEBI:10986"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29032"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.33"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>NH4(+)</name>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
        </cofactor>
        <cofactor evidence="6">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="6">A monovalent cation. Ammonium or potassium.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 6">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 1/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the type III pantothenate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.33" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368697.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13320"/>
    <dbReference type="EnsemblBacteria" id="ADO54050">
        <property type="protein sequence ID" value="ADO54050"/>
        <property type="gene ID" value="PPSC2_00305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.60"/>
    <dbReference type="eggNOG" id="COG1521">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066627_1_0_9"/>
    <dbReference type="OMA" id="HEPWLTL"/>
    <dbReference type="OrthoDB" id="2039419at2"/>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00352"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004594">
        <property type="term" value="F:pantothenate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01274">
        <property type="entry name" value="Pantothen_kinase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004619">
        <property type="entry name" value="Type_III_PanK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34265">
        <property type="entry name" value="PTHR34265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03309">
        <property type="entry name" value="Pan_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00671">
        <property type="entry name" value="baf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0630">Potassium</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="107"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="6"/>
            <end position="13"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>a monovalent cation</name>
            <dbReference type="ChEBI" id="CHEBI:60242"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="27724" checksum="FC63EAE5F5274E6E" modified="2011-01-11" version="1">MILVVDVGNTNIVLGIYEGRELLHHYRISTSRQATADEYGVLIHNLFSMGGVLKDDIQGVIISSVVPPLVRVLEEMCDKYIGKTPLIVGPGIKTGLNLRYENPREVGADRIVNAVAAVERFGGPLVVVDFGTATTFDCIDDKGNYLGGVIVPGIGISTEALYQRASKLPRIELEKPKKVIGRNTVHAMQAGIIFGYAGQVDGIVRRIKEEMQVEPTVIATGGLAELIASETESIQKVLPMLTLEGLRIIYQRNAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA4</accession>
    <name>E3EEA4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF5643 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_05110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55027.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599517.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1045"/>
    <dbReference type="EnsemblBacteria" id="ADO55027">
        <property type="protein sequence ID" value="ADO55027"/>
        <property type="gene ID" value="PPSC2_05110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1035"/>
    <dbReference type="eggNOG" id="ENOG502ZCEG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056165_0_0_9"/>
    <dbReference type="OrthoDB" id="1612763at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040680">
        <property type="entry name" value="DUF5643"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18705">
        <property type="entry name" value="DUF5643"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168879" description="DUF5643 domain-containing protein" evidence="1">
        <location>
            <begin position="50"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="domain" description="DUF5643" evidence="2">
        <location>
            <begin position="191"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55027.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="333" mass="36932" checksum="C2B3177BCD23E421" modified="2015-05-27" version="2">MQQTNLKSAFLKRVILTTSAFAILGTGAAIPIYMSPIAAAASNTKPAQAASSNLSLTQDGVTLKLGDVLYDGTRLSFSIEREGKNLPEGVMSLYLPEDAKASKNLKKYMVPEKDQKKGYIKRPEILIDGKEFKSLGMFGDKVSQKNAVEAEYNQLDALPDEFEMTIQVGVTRISKPFEFKVPVKKDGNMVSIKPNKTQKSGDFSYTVKQLDLTSRTTRLVLDSEGQVPASTKQTGKYAPSMMYYDIVDDQGKTLQQRRVGFYHSKPRTKYHIDELYSAIGSKPQYVTIKPYTFTVDPSNWSVVGQGKGADGKYKNGDKTYIKELEMTIPVPAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEG1</accession>
    <name>E3EEG1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Integrin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370043.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1433"/>
    <dbReference type="EnsemblBacteria" id="ADO55412">
        <property type="protein sequence ID" value="ADO55412"/>
        <property type="gene ID" value="PPSC2_06885"/>
    </dbReference>
    <dbReference type="GeneID" id="66573561"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1419"/>
    <dbReference type="eggNOG" id="ENOG50338T9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_158600_0_0_9"/>
    <dbReference type="OrthoDB" id="1821588at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007229">
        <property type="term" value="P:integrin-mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0401">Integrin</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="15528" checksum="5AEDCBFDC463D0E4" modified="2011-01-11" version="1">MWNPYEHSRQHPHDFIVEYRFYTPEEGGRKQLPIQGYRCDFSYEGDDITTTGIYAIHPEFEDEEGQLIMDTRHPVHREGQARMWILFGEMREKVHRHRIHVGTRGYFMEGPRRVGEVEVTSLVGLLTNPLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEK1</accession>
    <name>E3EEK1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Acetolactate synthase small subunit</fullName>
            <shortName evidence="8">AHAS</shortName>
            <shortName evidence="8">ALS</shortName>
            <ecNumber evidence="8">2.2.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Acetohydroxy-acid synthase small subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ilvN</name>
        <name evidence="10" type="ORF">PPSC2_07075</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>H(+) + 2 pyruvate = (2S)-2-acetolactate + CO2</text>
            <dbReference type="Rhea" id="RHEA:25249"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="2.2.1.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 8">Dimer of large and small chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the acetolactate synthase small subunit family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370080.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20055"/>
    <dbReference type="EnsemblBacteria" id="ADO55452">
        <property type="protein sequence ID" value="ADO55452"/>
        <property type="gene ID" value="PPSC2_07075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1460"/>
    <dbReference type="eggNOG" id="COG0440">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055003_1_3_9"/>
    <dbReference type="OMA" id="EPYGIKE"/>
    <dbReference type="OrthoDB" id="1500398at2"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00055"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990610">
        <property type="term" value="F:acetolactate synthase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="P:isoleucine biosynthetic process"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="entry name" value="ACT_AHAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004789">
        <property type="entry name" value="Acetalactate_synth_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027271">
        <property type="entry name" value="Acetolactate_synth/TF_NikR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019455">
        <property type="entry name" value="Acetolactate_synth_ssu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039557">
        <property type="entry name" value="AHAS_ACT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30239">
        <property type="entry name" value="PTHR30239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10369">
        <property type="entry name" value="ALS_ss_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00119">
        <property type="entry name" value="acolac_sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACT" evidence="9">
        <location>
            <begin position="6"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU368092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="161" mass="17645" checksum="3594CFA7AE5848C2" modified="2011-01-11" version="1">MTTKNTIAVLVNDHPGVLQRVSGLFGRRGFNIESITVGQSEEVGLSRMVIVTVGDENNLEQIEKQLYKLVDVIKVIDLSSKPMVARELAMIKVKAEPPQRPEIMGVVETFRAAVIDVGTTSLIVQVIGDTEKIDAMIELLKPYGIRELTRTGVTAMIRGNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN3</accession>
    <name>E3EEN3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_08255</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370341.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20860"/>
    <dbReference type="EnsemblBacteria" id="ADO55720">
        <property type="protein sequence ID" value="ADO55720"/>
        <property type="gene ID" value="PPSC2_08255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1735"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="DKFHKAT"/>
    <dbReference type="OrthoDB" id="750230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="33106" checksum="B9A855BC39EDB762" modified="2011-01-11" version="1">MNILKLRILVLIDKFHKATEVAETLQIKQPTVSFHMKSLEKEMGATLFSLQQGRIMLTEAGKKMLPYAKQILSLEQEARQAVDEMTEQSQGQLRLGAESISGMYLLPTIMADFAQQYPECRIQLEIQSPDVIKQLLKDGEVDFAFLDDGEYLLENAVAEPVASDQVGIIRSASAETSKSLDINGADTLDKHIWVKYSGASVVDSYSSLVKSHLEINSWEAVKQVVSGGEALAFFPACGVRSEDHTIPSVEWLPYPETDSTKSHYQINIVYQQDTHKNMMQQAFLDFIRREGIRTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP8</accession>
    <name>E3EEP8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">phoR1</name>
        <name evidence="13" type="ORF">PPSC2_08325</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370355.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20930"/>
    <dbReference type="EnsemblBacteria" id="ADO55735">
        <property type="protein sequence ID" value="ADO55735"/>
        <property type="gene ID" value="PPSC2_08325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1750"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_2_9"/>
    <dbReference type="OMA" id="MTETKKC"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031967">
        <property type="entry name" value="PhoR_single_Cache-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16736">
        <property type="entry name" value="sCache_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 13" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168845" description="Histidine kinase" evidence="10">
        <location>
            <begin position="23"/>
            <end position="600"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="12">
        <location>
            <begin position="194"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="11">
        <location>
            <begin position="375"/>
            <end position="597"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO55735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="600" mass="67359" checksum="EBCA19E977325370" modified="2011-01-11" version="1">MKSFRFRLTLIMLILIGVSVLAAGITMGQIFKNSNMKVLEENMGREIDLLRATFPFVNADALSSTDYVSYYSQKAKEIAHLTDSRVTFIRKDGTVVGDSLSDPRKMENHASREEIRQATSEGIGRTIRYSETLQRNMLYVAEPVVSDKGFDGYIRLSMSLKAVEEGMQRGWTAIGIGLVLLFIAAGLMSYRIARSLTSPIEHITGVANRISGLDYDARVGVQRRDEVGQLGEAINRMADSLQNQMKTIRDNEDLLQSVMSNMTGGILMIDARECIALVNRESERMLGVVGKRVTDKPYHELKKHYELTKLIEGSIQSRERLHGEVHLYNPEERLVLLDGVPMYEDEGGYRGMLFLLQDITAIRRLENMRSEFVANVSHELKTPIAAVKGFAETLLGGGVKDEETARSFLQIIYDESERLNRLIGDILELSKIESKRSPLDCSPIHISSFIESLLEKLNNVAAKKRITLHMDIPDELFMEADEDKLQQIFLNLLSNGINYTLDGGKVKIKVITLQRDNDTEKVVFTVSDTGIGIPKKDLPRIFERFYRVDKGRSRNSGGTGLGLSIVKHLVDLHHGTLSVESELGLGTTFTVELPLLQQEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EER4</accession>
    <name>E3EER4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amino acid acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ags</name>
        <name evidence="2" type="ORF">PPSC2_08400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370370.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21005"/>
    <dbReference type="EnsemblBacteria" id="ADO55751">
        <property type="protein sequence ID" value="ADO55751"/>
        <property type="gene ID" value="PPSC2_08400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1764"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105714_0_0_9"/>
    <dbReference type="OMA" id="AFCHYIY"/>
    <dbReference type="OrthoDB" id="1972497at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="6"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="25759" checksum="67C9FADD4E8D14E4" modified="2011-01-11" version="1">MSPQSYDIVAYQEQDHEAVCKLLVESFKAKFQALVALEDQDIQRLLMQVWVQNANSISMKQFVAKENEDVVGVLSLKWKAPSSSLPIANLISLAPLIKQFGCFNVFKFLTGMHALEYKPAIDECYIDHLAIRSSHRNQGIGRRFLAFAQQFTVESGFHALTLHVAHKNQQAIRLYHNLAFEIEQSQYNYWRHFWFKEPVWHLMSWKERNCNRGENSIEQNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EET0</accession>
    <name>E3EET0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">6-phospho-beta-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">bglH1</name>
        <name evidence="6" type="ORF">PPSC2_08490</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370386.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21095"/>
    <dbReference type="CAZy" id="GH1">
        <property type="family name" value="Glycoside Hydrolase Family 1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55767">
        <property type="protein sequence ID" value="ADO55767"/>
        <property type="gene ID" value="PPSC2_08490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1784"/>
    <dbReference type="eggNOG" id="COG2723">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001859_0_1_9"/>
    <dbReference type="OMA" id="NRWWLDP"/>
    <dbReference type="OrthoDB" id="654705at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018120">
        <property type="entry name" value="Glyco_hydro_1_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033132">
        <property type="entry name" value="Glyco_hydro_1_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="PTHR10353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00572">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00653">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="469" mass="53586" checksum="84B0B9E17379FF25" modified="2011-01-11" version="1">MKHNQLKAFPENFFWGGSTSAYQVEGAWDEDGKGPSVIDMANHVEGVTDFKVTSDHYHMFKEDVALMAEMGFKAYRFSIAWTRIYPQGAGEVNPKGIAFYSSLIDELIKYGIEPIVTMYHFDLPYALEQQGGWSKRETIDAFEQYAKTLFENFGDRVKYWLTINEQNMLILHPGSIGTLDTSLENPQKVLYQQNHHMLVAQAKAMVLCHEMLPDAKIGPAPNIGVIYPASSKPEDTLAADNYAAIRNWLYLDMAVFGRYNHIAWSYLVEKGYEPVIEEGDMDILAKGNPDFIAFNYYTSQTVGESLDDGNDFSHTGDQHEIVGEPGAYRGSVNPNLQTTEFGWEIDPVGFRTTLRQIYSRYRLPLIVTENGLGAFDKLEEGDVVNDPYRIDFFKKHIEQIQLAITDGVEVFGFCPWSAIDLVSTHQGSSKRYGFIYVDREEFDLKDLRRIRKQSFYWYQKLIATNGEIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEX3</accession>
    <name>E3EEX3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-255</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-255</name>
        <name evidence="2" type="ORF">PPSC2_00545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368741.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13550"/>
    <dbReference type="EnsemblBacteria" id="ADO54096">
        <property type="protein sequence ID" value="ADO54096"/>
        <property type="gene ID" value="PPSC2_00545"/>
    </dbReference>
    <dbReference type="GeneID" id="66574858"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.107"/>
    <dbReference type="eggNOG" id="ENOG5032UFV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1011376_0_0_9"/>
    <dbReference type="OMA" id="WHISSQY"/>
    <dbReference type="OrthoDB" id="1481564at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="128"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="217"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31557" checksum="5FBE669E9DA5C24C" modified="2011-01-11" version="1">MRTVLKEGWALVRIRFYIVIILFLYRLLWGVFLYRLVQSAVVPLLLRYPDQSQNELGKTLFWMEGQIALMDSREVHVYLWILLGATVLRVLITPFIRAGIYQSLYTDASEPQSLSFFKGMKRHGMSSLLYYIIELGLLLLPAFWVVPRLYPIVAGTLQSSSYLLHLLPYAIGWVAYGWFIRQCILYMQLGTVSGHAILSSLLAFFRQLLPAVSVSLLLGACVLLVFGLFGTVAMIWTGMLALILQQSYHFVTSLVRLWHISSQYRLWHIDISSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF19</accession>
    <name>E3EF19_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase</fullName>
            <ecNumber evidence="10">2.4.1.227</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">murG</name>
        <name evidence="13" type="synonym">murG1</name>
        <name evidence="13" type="ORF">PPSC2_02885</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UDP-N-acetyl-alpha-D-glucosamine = di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1-&gt;4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + H(+) + UDP</text>
            <dbReference type="Rhea" id="RHEA:31227"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:61387"/>
            <dbReference type="ChEBI" id="CHEBI:61388"/>
            <dbReference type="EC" id="2.4.1.227"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="10">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Peripheral membrane protein</topology>
            <orientation evidence="10">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the glycosyltransferase 28 family. MurG subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.227" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54539.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15700"/>
    <dbReference type="CAZy" id="GT28">
        <property type="family name" value="Glycosyltransferase Family 28"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54539">
        <property type="protein sequence ID" value="ADO54539"/>
        <property type="gene ID" value="PPSC2_02885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.549"/>
    <dbReference type="eggNOG" id="COG0707">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037404_0_0_9"/>
    <dbReference type="OMA" id="AGNEQAH"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051991">
        <property type="term" value="F:UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050511">
        <property type="term" value="F:undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030259">
        <property type="term" value="P:lipid glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00033">
        <property type="entry name" value="MurG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006009">
        <property type="entry name" value="GlcNAc_MurG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004276">
        <property type="entry name" value="GlycoTrans_28_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03033">
        <property type="entry name" value="Glyco_transf_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 10" id="KW-0132">Cell division</keyword>
    <keyword evidence="1 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 10" id="KW-0133">Cell shape</keyword>
    <keyword evidence="9 10" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3 10 13" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 10" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_transf_28" evidence="11">
        <location>
            <begin position="5"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_tran_28_C" evidence="12">
        <location>
            <begin position="190"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="166"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="290"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54539.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="354" mass="39936" checksum="75B78498DB732381" modified="2015-05-27" version="2">MNKKIMFTGGGSSGHVAVNLALIPHLLEQHWSVQYIGSEQGIERNLISGLEDVCYFSVATGKLRRYFDWNNVKDPFKVLKGISQAYRIIKKEKPDIIFSKGGFVSVPVVLAGWLNRVPVIIHESDLTPGLANKISSMFATEICTTFPETTEYFRSKNTRYIGAVVRDELKEGKAAKGLAYCGFTRNKPIMLIMGGSLGSKKINELVWLNLEALLAHFQIVHICGKDQVNNSIRTNGYQQFDYINDELADVMAMADMVVSRAGSNSIFEFLTLRKPMLLIPLSKAVSRGDQILNARSFKARGLCEFLEEEDLESERFVDIILRLYEKRSDYIRNMEKINTDQSASKLLDLIKVYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF48</accession>
    <name>E3EF48_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">GTP pyrophosphokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">relA1</name>
        <name evidence="3" type="ORF">PPSC2_03020</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; ppGpp biosynthesis; ppGpp from GTP: step 1/2.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369207.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15835"/>
    <dbReference type="EnsemblBacteria" id="ADO54568">
        <property type="protein sequence ID" value="ADO54568"/>
        <property type="gene ID" value="PPSC2_03020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.576"/>
    <dbReference type="eggNOG" id="COG2357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077095_1_1_9"/>
    <dbReference type="OMA" id="WASMEHI"/>
    <dbReference type="OrthoDB" id="1938730at2"/>
    <dbReference type="UniPathway" id="UPA00908">
        <property type="reaction ID" value="UER00884"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015970">
        <property type="term" value="P:guanosine tetraphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05399">
        <property type="entry name" value="NT_Rel-Spo_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007685">
        <property type="entry name" value="RelA_SpoT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04607">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00954">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RelA_SpoT" evidence="2">
        <location>
            <begin position="75"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="31082" checksum="FC6BFA8489CA7BFF" modified="2011-01-11" version="1">MNEPDWKHLNAVPLPLQEFQLQLDQNSVDAKQLEEWKKIPVLYQLALEELKNKIKLIQTEWKLIDGFSPIEHIKTRIKEPHSIVEKVRRKGHEVTLDNILREIHDIAGMRVVCAFVKDIYRLMDHLRTREDIRILEVKDYIAHPKPNGYQSLHVIVEIPLILFEGTRWIKVEIQLRTLAMDFWASMEHILYYKFDKKVPEHVVNGLTEAARATYELDQKMLKLRGEILSLSEEQDVEEAPVKRAEESALKALSLPADHATSRSQTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF64</accession>
    <name>E3EF64_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-734</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-734</name>
        <name evidence="1" type="ORF">PPSC2_03090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369223.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15900"/>
    <dbReference type="EnsemblBacteria" id="ADO54584">
        <property type="protein sequence ID" value="ADO54584"/>
        <property type="gene ID" value="PPSC2_03090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.591"/>
    <dbReference type="eggNOG" id="COG5010">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035973_0_0_9"/>
    <dbReference type="OMA" id="AGPYYGI"/>
    <dbReference type="OrthoDB" id="825054at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="444" mass="51540" checksum="97E39C233086D2F1" modified="2011-01-11" version="1">MWFGKNETQLDRIKDKLNQAMHKDKDFSVFGASSHQYRVKEKLTAKELADWQAHNQVILPEPYALFLTNIGNGGAGPYYGIYPIEKATSYTEHQALLAKSVLHLGMAKEEWNHLIEPLTKDEDIPDEEYDDARNKVLGGMLCIGTQGCEYDMYLVLEGKYRGRIVYTSDFHPDHPFFFVYEDSFLDWYERWLDEIILDYDIGWFGSRMPGDENALIQMYQSAPNEEIQAKALDGMFKFKEVAQPTLGFLKNIAEQSPKNRTTAVWLICKTSFDTGRKYLLELLQSDEHRDFLQALTILHASSKTANLTEFIPVILQSLDRIHDPETLRYAGYILEDYGEITLRNFAPFLCHADPKMQTTAIYAARSCENKQGSWQIIEQMLIGSDPQVLKNMILYWGIIPHEKLLPYYKAVWPEYKKNPNFKEKFIGCLRELHLPDDYFNKDES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFM5</accession>
    <name>E3EFM5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370143.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20345"/>
    <dbReference type="EnsemblBacteria" id="ADO55516">
        <property type="protein sequence ID" value="ADO55516"/>
        <property type="gene ID" value="PPSC2_07365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1522"/>
    <dbReference type="eggNOG" id="COG5482">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075295_0_0_9"/>
    <dbReference type="OMA" id="IMTAYRQ"/>
    <dbReference type="OrthoDB" id="1701649at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018679">
        <property type="entry name" value="DUF2161"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09929">
        <property type="entry name" value="DUF2161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="30510" checksum="00D95A6358CA4242" modified="2011-01-11" version="1">MAVRHETELYAPVKAFFENLGYEVKGEVRNCDLVGIKPGQQTPLIVEIKKTFNLALVLQGMQRLKLSSNVYVAVERNRAKKGAVNQRWNELIGLCRQLGLGLLTVTHFKTKPPLVEVLCKPVASSDDVYKTTAIRRGSRKEKLLREFHARSGDHNVGGSTRRKLVTAYREKALRVAAALQGLGEAAPAQLARTAAVSDAAAVLQRNYYGWFERVARGRYRLTPFGEAALSEYAEVLQQQGIETAAGMAAEFNESSEQLQIADASVGYSTIVAEAEDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFP9</accession>
    <name>E3EFP9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tnpIS3</name>
        <name evidence="2" type="ORF">PPSC2_08510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55771">
        <property type="protein sequence ID" value="ADO55771"/>
        <property type="gene ID" value="PPSC2_08510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1788"/>
    <dbReference type="eggNOG" id="COG2963">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027402_19_2_9"/>
    <dbReference type="OMA" id="WHQEGRA"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11801" checksum="45FFF81A7F159FC8" modified="2011-01-11" version="1">MAKKGQSFRQYSLDVKMEAVRLVNEEHMSIREVTKQLDIRNKSQVQSWVMKHRAGENLQPTTTRQGRPKTKFSSMEEEMAYLRAEIEYLKKQYPNLHKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFR8</accession>
    <name>E3EFR8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chromosome partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">parB3</name>
        <name evidence="5" type="ORF">PPSC2_08585</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370409.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1818"/>
    <dbReference type="EnsemblBacteria" id="ADO55790">
        <property type="protein sequence ID" value="ADO55790"/>
        <property type="gene ID" value="PPSC2_08585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1807"/>
    <dbReference type="eggNOG" id="COG0863">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2524431_0_0_9"/>
    <dbReference type="OrthoDB" id="1487464at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002295">
        <property type="entry name" value="N4/N6-MTase_EcoPI_Mod-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00506">
        <property type="entry name" value="D21N6MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0680">Restriction system</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="4">
        <location>
            <begin position="17"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9620" checksum="5B501C8F9FF0F3BB" modified="2011-01-11" version="1">MFEVADDGVSIYERKQTTLWQFDRPFRNEYHPTLKPIPLISYPIKNSSKLGDIVFDLFGGSGSMLIACEETNRICYTVSLIPNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFS2</accession>
    <name>E3EFS2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370413.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1822"/>
    <dbReference type="EnsemblBacteria" id="ADO55794">
        <property type="protein sequence ID" value="ADO55794"/>
        <property type="gene ID" value="PPSC2_08600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1811"/>
    <dbReference type="HOGENOM" id="CLU_2772043_0_0_9"/>
    <dbReference type="OrthoDB" id="1865117at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="8364" checksum="AD33F50597E4D521" modified="2011-01-11" version="1">MEYPTKWETHVYPRSTEIEQWFEEDVNAEDIIKKLDIGKKTWYKYIDKHSMLAELVKWSRSVKSVNAKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG76</accession>
    <name>E3EG76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Serine hydroxymethyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370875.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23190"/>
    <dbReference type="EnsemblBacteria" id="ADO56269">
        <property type="protein sequence ID" value="ADO56269"/>
        <property type="gene ID" value="PPSC2_10795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2286"/>
    <dbReference type="eggNOG" id="ENOG502ZNH6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076871_0_0_9"/>
    <dbReference type="OMA" id="TINKHEM"/>
    <dbReference type="OrthoDB" id="1339195at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024992">
        <property type="entry name" value="DUF3891"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13030">
        <property type="entry name" value="DUF3891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="31823" checksum="B701842C38002499" modified="2011-01-11" version="1">MVIYETDQAYIMTTQHDHAHISGELASQWEDSAFKNRRHKQDFIYAAREHDRGWIRLDAAPFWNDYVSAPYTFIDFPLSPRFVFYRLGIDEVEQENAYAALLCSLMYKELVGRTEHEKAQDKQITHAYQEAEEQRRQRLRQELTCGVTFEHQVRTDVRRMLFCDELSLFLCSREPGTPTADYEWFAEGLSFPAVRHESERVRAEWLSDQTVGLSFFPFKGNVEITHTFKKVSKENIRTSGLLEAYRSSECTHRTFTIEHIMEVEEQKENA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGE9</accession>
    <name>E3EGE9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Enolase</fullName>
            <ecNumber evidence="10">4.2.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">2-phospho-D-glycerate hydro-lyase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">2-phosphoglycerate dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 15" type="primary">eno</name>
        <name evidence="15" type="ORF">PPSC2_00970</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(2R)-2-phosphoglycerate = H2O + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:10164"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58289"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="EC" id="4.2.1.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="10">The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 4/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cell surface</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Secreted</location>
        </subcellularLocation>
        <text evidence="10">Fractions of enolase are present in both the cytoplasm and on the cell surface. The export of enolase possibly depends on the covalent binding to the substrate; once secreted, it remains attached to the cell surface.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the enolase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.11" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368821.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13960"/>
    <dbReference type="EnsemblBacteria" id="ADO54177">
        <property type="protein sequence ID" value="ADO54177"/>
        <property type="gene ID" value="PPSC2_00970"/>
    </dbReference>
    <dbReference type="GeneID" id="66574770"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.181"/>
    <dbReference type="eggNOG" id="COG0148">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031223_2_1_9"/>
    <dbReference type="OMA" id="EFMIIPV"/>
    <dbReference type="OrthoDB" id="533698at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009986">
        <property type="term" value="C:cell surface"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000015">
        <property type="term" value="C:phosphopyruvate hydratase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004634">
        <property type="term" value="F:phosphopyruvate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03313">
        <property type="entry name" value="enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00318">
        <property type="entry name" value="Enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000941">
        <property type="entry name" value="Enolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020810">
        <property type="entry name" value="Enolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020809">
        <property type="entry name" value="Enolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020811">
        <property type="entry name" value="Enolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11902">
        <property type="entry name" value="PTHR11902"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00113">
        <property type="entry name" value="Enolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03952">
        <property type="entry name" value="Enolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001400">
        <property type="entry name" value="Enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00148">
        <property type="entry name" value="ENOLASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00002">
        <property type="entry name" value="enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01192">
        <property type="entry name" value="Enolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01193">
        <property type="entry name" value="Enolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01060">
        <property type="entry name" value="eno"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00164">
        <property type="entry name" value="ENOLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 10" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="9 10 15" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Enolase_N" evidence="14">
        <location>
            <begin position="4"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="Enolase_C" evidence="13">
        <location>
            <begin position="139"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10 12">
        <location>
            <begin position="364"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10 11">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10 11">
        <location>
            <position position="337"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10 12">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 12">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 12">
        <location>
            <position position="285"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10 12">
        <location>
            <position position="312"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent; in inhibited form" evidence="10">
        <location>
            <position position="337"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 12">
        <location>
            <position position="388"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR001400-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR001400-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM01192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM01193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO54177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="428" mass="46001" checksum="9137C9582040AF1C" modified="2011-01-11" version="1">MTIISDVYAREVLDSRGNPTVEVEVYLESGAIGRAIVPSGASTGAHEAVELRDNDKSRYLGKGVLQAVKNVNEIIAPEVIGLDAVNQVEIDTLMIKLDGTPNKGKLGANAILAVSMAVARAAAEALGLPLYTYLGGFNAKQLPVPMMNIVNGGAHADNNVDVQEFMVLPVGAPTFKEALRVGAEIFHNLKSVLNSKGLNTAVGDEGGFAPNFKSNEEALSTIIEAIEKAGYKPGVDVFLGMDVASTEFFKDGKYTLEGEGKSFTSAEFVDLLASWVDKYPIITIEDGCSEDDWEGWKLLTEKLGNKIQLVGDDLFVTNTERLAKGIDENIGNSILIKVNQIGTLTETFDAIELAKRAGYTAVISHRSGESEDSTIADIAVATNAGQIKTGAPSRTDRIAKYNQLLRIEDQLGELAQYHGLKSFYNLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGG1</accession>
    <name>E3EGG1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-341</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-341</name>
        <name evidence="1" type="ORF">PPSC2_01030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368832.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0202"/>
    <dbReference type="EnsemblBacteria" id="ADO54189">
        <property type="protein sequence ID" value="ADO54189"/>
        <property type="gene ID" value="PPSC2_01030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.194"/>
    <dbReference type="HOGENOM" id="CLU_450433_0_0_9"/>
    <dbReference type="OrthoDB" id="791672at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="606" mass="69699" checksum="5A5D1D49904351A0" modified="2011-01-11" version="1">MIIEKDLLALSDVAKLCGTSNSNVSNWRTRDSNFPDPFTETSAGPIWKAEDIVTYLRKKFDDGYDVISTGNISSKRMAIIGRARGGKSFLISRFVSDRTGFVKLFCGNSADKTACPIYIKISEYITLEYYVFHTDFNSIYLADDNDDELKKLRERVSSLVDQPYWQDNIEKMVEIEGVIREIRAVEDRYPNRKNSNTYIDTFQRPSTFCKEILRECGLGSIEIVDTPGVSGNVEASKIAKSDIYLFLLKPENSDESQTLRKIVTEIKADVATSKAVFLYKKEAILFTKQEYEDERLSIRKDMAAFSELFKDFKGNIISTELDVLDPASHCILFPTMSRDRITLPEELFLEDIKGKLLEAFKPEDESSKDNEFKKIVSKLGGKAEEFALNIMRNIPVHGLGADEKEYSVEQVIAEQHDRVMTKDNYRLRNDLDCAYSRESSILDNYFSSFTAADHPEEWQQIIIKYVHKKLTTSVRTDRGLGVGTHHWEERPARTMLIEESILADRILAKILDKDERYRNEPYRMAFKESNITSATWNYVGCINDNDAVTKLKIIKECLLNVSVSYREEMVLCRYVGGLRKIAEYKILENMGYKKDKCMEELKTMPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGR5</accession>
    <name>E3EGR5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369781.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18575"/>
    <dbReference type="EnsemblBacteria" id="ADO55149">
        <property type="protein sequence ID" value="ADO55149"/>
        <property type="gene ID" value="PPSC2_05670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1155"/>
    <dbReference type="eggNOG" id="ENOG5033GN6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_161314_0_0_9"/>
    <dbReference type="OMA" id="MNKDPYG"/>
    <dbReference type="OrthoDB" id="2023047at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="14668" checksum="37F06C2BAE28DE27" modified="2011-01-11" version="1">MNKDPYGHLATALQSSFHKHTKQALSGVGAVLGTITSTGLKLDDFKHELQDYLVAELPGLLSVPRHMYKGTSTSVESENWEGKELKTSFYIGEDELEDVNLSLNKGLKPGDRVLAVRVNSGNDVVVVCKVVNGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGZ0</accession>
    <name>E3EGZ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acyl-CoA thioester hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ykhA</name>
        <name evidence="5" type="ORF">PPSC2_07525</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the acyl coenzyme A hydrolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55550.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599583.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20495"/>
    <dbReference type="EnsemblBacteria" id="ADO55550">
        <property type="protein sequence ID" value="ADO55550"/>
        <property type="gene ID" value="PPSC2_07525"/>
    </dbReference>
    <dbReference type="GeneID" id="66573433"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1555"/>
    <dbReference type="eggNOG" id="COG1607">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050164_3_1_9"/>
    <dbReference type="OrthoDB" id="1712258at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016790">
        <property type="term" value="F:thiolester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040170">
        <property type="entry name" value="Cytosol_ACT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033120">
        <property type="entry name" value="HOTDOG_ACOT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11049">
        <property type="entry name" value="PTHR11049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51770">
        <property type="entry name" value="HOTDOG_ACOT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HotDog ACOT-type" evidence="4">
        <location>
            <begin position="7"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55550.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="19378" checksum="9039308C4BCC4A94" modified="2015-05-27" version="2">MESKYIRETYCFKTSRVFPNDINNHNTLFGGRLMSYIDDIASIAAAKLCRTNTVTASTDSVDFLLPIHPSDSVTLEAFVTWTGRSSMEVFVKVIREGLMTGDRKIAATAFLTFVALDENNRKVTVPQVIPETEEQIQLHQTAPSRAAIRRQRREESKQLASFLTTDFPWEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHE6</accession>
    <name>E3EHE6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6 7">Elongation factor Ts</fullName>
            <shortName evidence="6">EF-Ts</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">tsf</name>
        <name evidence="10" type="ORF">PPSC2_10035</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6 7">Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the EF-Ts family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370709.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22505"/>
    <dbReference type="EnsemblBacteria" id="ADO56099">
        <property type="protein sequence ID" value="ADO56099"/>
        <property type="gene ID" value="PPSC2_10035"/>
    </dbReference>
    <dbReference type="GeneID" id="66577908"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2115"/>
    <dbReference type="eggNOG" id="COG0264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047155_1_1_9"/>
    <dbReference type="OMA" id="DAGMMDC"/>
    <dbReference type="OrthoDB" id="1405357at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00050">
        <property type="entry name" value="EF_Ts"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036402">
        <property type="entry name" value="EF-Ts_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001816">
        <property type="entry name" value="Transl_elong_EFTs/EF1B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014039">
        <property type="entry name" value="Transl_elong_EFTs/EF1B_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018101">
        <property type="entry name" value="Transl_elong_Ts_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11741">
        <property type="entry name" value="PTHR11741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00889">
        <property type="entry name" value="EF_TS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="SSF46934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54713">
        <property type="entry name" value="SSF54713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00116">
        <property type="entry name" value="tsf"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01126">
        <property type="entry name" value="EF_TS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01127">
        <property type="entry name" value="EF_TS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6 7" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="4 6 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF_TS" evidence="9">
        <location>
            <begin position="22"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="region of interest" description="Involved in Mg(2+) ion dislocation from EF-Tu" evidence="6">
        <location>
            <begin position="81"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24229" checksum="85C7A004D0CD6D8D" modified="2011-01-11" version="1">MAVNASAVKELREKTGAGMLDCKKALEEANGDLTKAVEVLREKGLAAAANKAGRIATEGVVESYIHAGGRIGVLVEVNCETDFVAKTDQFKDFVRDIAMHIAASNPRYVRREEVPQEEIEKEKEILKAQALNEGKPEKIVEKMVEGRIGKFYEEFCLLEQSFIKDPDKTISTLINEKISTIGENISVRRFVRFELGEGLEKKEDNFYEEVMSQVKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHE8</accession>
    <name>E3EHE8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosome-recycling factor</fullName>
            <shortName evidence="3">RRF</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Ribosome-releasing factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">frr</name>
        <name evidence="6" type="ORF">PPSC2_10045</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the RRF family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370711.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22515"/>
    <dbReference type="EnsemblBacteria" id="ADO56101">
        <property type="protein sequence ID" value="ADO56101"/>
        <property type="gene ID" value="PPSC2_10045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2117"/>
    <dbReference type="eggNOG" id="COG0233">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073981_2_0_9"/>
    <dbReference type="OMA" id="FNPMNNG"/>
    <dbReference type="OrthoDB" id="1674344at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006415">
        <property type="term" value="P:translational termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00520">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00040">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002661">
        <property type="entry name" value="Ribosome_recyc_fac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023584">
        <property type="entry name" value="Ribosome_recyc_fac_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036191">
        <property type="entry name" value="RRF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20982">
        <property type="entry name" value="PTHR20982"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01765">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55194">
        <property type="entry name" value="SSF55194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00496">
        <property type="entry name" value="frr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RRF" evidence="5">
        <location>
            <begin position="20"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="139"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="20776" checksum="5F36948BD2A4CA01" modified="2011-01-11" version="1">MPQSVKKSAEERMQKAIQALQRDLSSLRAGRATPALLDRVQVEYYGAMTPVNQLANINTPDSRTLMIQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKSGEEAKIAIRNIRRDANDDIKKMEKSDISEDESRKHQEDIQKTTDKFIAEVDKVLAAKEKEIMEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI08</accession>
    <name>E3EI08_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dhaR5</name>
        <name evidence="3" type="ORF">PPSC2_12330</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371201.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56597">
        <property type="protein sequence ID" value="ADO56597"/>
        <property type="gene ID" value="PPSC2_12330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2616"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_28_4_9"/>
    <dbReference type="OMA" id="FMATVHG"/>
    <dbReference type="OrthoDB" id="2047542at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="191" mass="21964" checksum="DEEB0ACE94E4787B" modified="2011-01-11" version="1">MNIKKNTVQEIMDIGLTLVQERGYNGFSYADIAEAIGIRKASIHYHFPSKQDLVQAVLNRYRREFMDKLQQINDQPLSWRQKIQSFFLLYREPLENNTKLCLCSMMAAELNSFPIEIRDELNLFFDANTLWVENVLDQGKSAGEFTFSNAALEQAKILIAFVQGAQLLSRTSSEKGYFDSLVLNYMATLTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIF6</accession>
    <name>E3EIF6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">upgB</name>
        <name evidence="2" type="ORF">PPSC2_06195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55269.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599545.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19150"/>
    <dbReference type="EnsemblBacteria" id="ADO55269">
        <property type="protein sequence ID" value="ADO55269"/>
        <property type="gene ID" value="PPSC2_06195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1277"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_3_1_9"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168945" evidence="1">
        <location>
            <begin position="30"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55269.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="454" mass="49340" checksum="43ECE04A02C74240" modified="2015-05-27" version="2">MRFFRLKSALTLLILTAMVVAAGCSNNTAAEKPSNGNDGAAAASPIKLTWWHSMSGNGEKAIKQIAADFNASHKDIQVEPVYQGKYDDSLNKLKASLGSNSGPDIIQVYEIGSKFMIDSKMITPVQQFIDADKFDLSQLEPNITRYYTIDGKLNAMPFNTSNPILYYNKDAFKAAGLDPANPPKTYDEFEKAAKALSKDGKSGASIAIYGWFMEQLFANQNADYVNNGNGREQAATESLLNSDAGVKTLTWWKKMIDEKVVSNLGRNSDDTAKAFSAGQIAMTLDSTASLRNIVEQVGDKFEVGTGFLPRANEAKEGGVVVGGASLYIMNNKPEAQQKAAWEFIKFVASPAVQAQWSVNTGYFPITKAAYDEKVLKDNMVKYPQFQTAVDQLHASAQSTATQGAVMGVFPEARQIVEGAIEAVLSGQQQPKQALDQAAQEITGKIAQYNQTVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIK2</accession>
    <name>E3EIK2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370267.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1664"/>
    <dbReference type="EnsemblBacteria" id="ADO55640">
        <property type="protein sequence ID" value="ADO55640"/>
        <property type="gene ID" value="PPSC2_07880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1648"/>
    <dbReference type="eggNOG" id="ENOG50307NC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2070776_0_0_9"/>
    <dbReference type="OrthoDB" id="1585346at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="118" mass="13913" checksum="1078BBA619B95A98" modified="2011-01-11" version="1">MSDTSFLFYDSQIYNDKLYILSEDLNYTIFNDLNKNPKKLRLKQSNSVSEKIQNEKGIISGVQYLAGSVFVLYDYVKNSPVDRIRERREYDLLTGKELHVIPLAFKSNKEMIRFFLTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIR8</accession>
    <name>E3EIR8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_09280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370554.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21750"/>
    <dbReference type="EnsemblBacteria" id="ADO55937">
        <property type="protein sequence ID" value="ADO55937"/>
        <property type="gene ID" value="PPSC2_09280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1955"/>
    <dbReference type="eggNOG" id="ENOG502ZAKW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097508_0_0_9"/>
    <dbReference type="OMA" id="KGFDHES"/>
    <dbReference type="OrthoDB" id="1358656at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24523" checksum="A9AD55D914FD0715" modified="2011-01-11" version="1">MKNMMLDAQVTPNGLKERMMLLSALDIILSSEDWLRTYRMQSEWSGDVCLGEVNNGAGDTIHMLWTRGGVLLKGFDHESPVSPHARDEYEVWPGMYDGVPDDMMELLEDEALEKEDVTFCMWREAGDKEWRMGNANFPEGYDDGSSFLLGKIIVTPEEYQDWAESYYELPISLGVVSQIFNGVPITAQMISALHPQRNVTEVVKELKQLGIQVHES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIW5</accession>
    <name>E3EIW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykvE</name>
        <name evidence="2" type="ORF">PPSC2_09495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370601.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21965"/>
    <dbReference type="EnsemblBacteria" id="ADO55984">
        <property type="protein sequence ID" value="ADO55984"/>
        <property type="gene ID" value="PPSC2_09495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2002"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_2_9"/>
    <dbReference type="OMA" id="DNRNKML"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="17407" checksum="AD876DC96D12B74A" modified="2011-01-11" version="1">MSVKPDDQDLALNLFVVLARAYNSVTSRTNRDIHSHGLNTTEFGVLDLLYYRGPQPLQKIGEKVLISSGNITYVVDKLQKKNLLFRRASQDDRRVIYAELTDDGRHFFEQIFPQHHRVIMETVDGLSVEEKEQAIHLLKKLGLTAEGQKSNGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJB6</accession>
    <name>E3EJB6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Quinolinate synthase</fullName>
            <ecNumber evidence="2 9">2.5.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">nadA</name>
        <name evidence="10" type="ORF">PPSC2_11430</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>dihydroxyacetone phosphate + iminosuccinate = H(+) + 2 H2O + phosphate + quinolinate</text>
            <dbReference type="Rhea" id="RHEA:25888"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29959"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
            <dbReference type="EC" id="2.5.1.72"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Cofactor biosynthesis; NAD(+) biosynthesis; quinolinate from iminoaspartate: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the quinolinate synthase family. Type 3 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.72" evidence="2 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371008.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23800"/>
    <dbReference type="EnsemblBacteria" id="ADO56403">
        <property type="protein sequence ID" value="ADO56403"/>
        <property type="gene ID" value="PPSC2_11430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2418"/>
    <dbReference type="eggNOG" id="COG0379">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047382_2_0_9"/>
    <dbReference type="OMA" id="CFCSTMN"/>
    <dbReference type="OrthoDB" id="613347at2"/>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008987">
        <property type="term" value="F:quinolinate synthetase A activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10800">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00569">
        <property type="entry name" value="NadA_type3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003473">
        <property type="entry name" value="NadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036094">
        <property type="entry name" value="NadA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023515">
        <property type="entry name" value="Quinolinate_synth_A_type3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30573">
        <property type="entry name" value="PTHR30573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02445">
        <property type="entry name" value="NadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142754">
        <property type="entry name" value="SSF142754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00550">
        <property type="entry name" value="nadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0408">Iron</keyword>
    <keyword evidence="8 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Iminoaspartate binding" evidence="9">
        <location>
            <begin position="141"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="region of interest" description="Iminoaspartate binding" evidence="9">
        <location>
            <begin position="256"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="162"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="320"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="41702" checksum="C76C1C8C64A7FBEA" modified="2011-01-11" version="1">MSMLDVLQGNRGLMPEHYKTQTVADMEQRVAELKQKWGSKLLIPGHHYQKDEVIQFADITGDSLQLAQMAAQNQEAEFIVFCGVHFMAETADMLTTDQQTVVLPDMRAGCSMADMANMEQTERAWKHLQELVGDTIIPLTYVNSTAEIKAFVGRHGGATVTSSNAKQVLAWALKQKERILFLPDQHLGRNTAHDLGIPLDEMAVWNPMTDQLETERNPETVKIILWKGHCSVHEKFTVDHIRNVRERDKNIRVIVHPECSHEVVQLADCAGSTKFIIDTIRAAEPGTQWAVGTEMNLVQRIRQQYPEQQIESLNPDMCPCLTMNRIDLPHLLWAMEQIDRGEPVGVIRVDAQIRQDAVQALNRMLAIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC0</accession>
    <name>E3EJC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371012.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23815"/>
    <dbReference type="EnsemblBacteria" id="ADO56407">
        <property type="protein sequence ID" value="ADO56407"/>
        <property type="gene ID" value="PPSC2_11450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2421"/>
    <dbReference type="eggNOG" id="COG1246">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075236_0_0_9"/>
    <dbReference type="OMA" id="LCCIIRS"/>
    <dbReference type="OrthoDB" id="1254793at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="29677" checksum="616F8D1B6B237667" modified="2011-01-11" version="1">MENSTTTTEWYENKIREDGCFCMRSMQKTPGYVQKLNWTEKEFTQGLTYIQLRKDNKPVGFIEYALGEQAWRAVHADGYLVIHCIWIAVTGLGLGSQLIQRCIQDAITLGKKGVAVVTNIDTSWAPGPEIFLKNGFRHVEDAPYSFQLYVYKLNQEHSDPYFPDNWVLRLDRFSEGLTILRTHQCPYLEIATHNVIEAAETVGIQPEIIDIRDRSQLMELSPTPYGVFHVICNGELISYHRMTPRSFAKKLTMLYSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC2</accession>
    <name>E3EJC2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Bacitracin ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">bcrC</name>
        <name evidence="8" type="ORF">PPSC2_11460</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371014.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23825"/>
    <dbReference type="EnsemblBacteria" id="ADO56409">
        <property type="protein sequence ID" value="ADO56409"/>
        <property type="gene ID" value="PPSC2_11460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2423"/>
    <dbReference type="eggNOG" id="COG0671">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072573_8_1_9"/>
    <dbReference type="OMA" id="TPWLHPV"/>
    <dbReference type="OrthoDB" id="1928533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050380">
        <property type="term" value="F:undecaprenyl-diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03385">
        <property type="entry name" value="PAP2_BcrC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026841">
        <property type="entry name" value="Aur1/Ipt1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033879">
        <property type="entry name" value="UPP_Pase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14378">
        <property type="entry name" value="PAP2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="125"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="149"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="7">
        <location>
            <begin position="57"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24677" checksum="0AF55C727CE121A1" modified="2011-01-11" version="1">MLINVDFALFHWINELADHLAFLNGTMRFLAQYAPYLFGVALLMYWFTFKMPHRMMVLEAVITVCIGFIISWGLGHLFYRDRPFVGHSVIQLIHHDPNASFPSNHALGAFALAAILWLHHQKYRVLWVILAVLIAISRVWTGVHYPSDILAGALIGAGCAVGVHKFIRSRKFPGIFMQAAIILYEKWEQKLGLKPRSQTRTKMTESTSSVQIKSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC6</accession>
    <name>E3EJC6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">PIGA</name>
        <name evidence="2" type="ORF">PPSC2_11480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371018.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23845"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56413">
        <property type="protein sequence ID" value="ADO56413"/>
        <property type="gene ID" value="PPSC2_11480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2427"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042257_1_0_9"/>
    <dbReference type="OMA" id="PRHYGPW"/>
    <dbReference type="OrthoDB" id="694191at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="159"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="344" mass="39180" checksum="77BE9F17E31E2E2D" modified="2011-01-11" version="1">MASRQSKALKNRPLTIVQVISNYPDAQPVPSIKGGTEKVVHELTEELVRRGHHVSLFAARGSRSSARLITYPKGLKHSQIPQYVLRHMPSGTHIIHDHTFRSAVARRKLPCSSLCTVHLPVKKHGKNPVYVSKRARQLMGGGKGFYIYNGINTHEYEFSSEKRGYLLFMGRIIPDKGVLQAIQVAERTGKRLLIAGPIKAPVFFRREIQKRIQRNPNIRYVGPVGGDRKQKLLKHAECLLFPSLWEEPFGLVMVEAMACGTPVLALKNGSVPEVLSGFPQLICKSVGQMARKAQQKNYPSPAQLRLYVNQRFTNKQMTSNYLRLYREIIRRREQKRGHRKPIRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJJ7</accession>
    <name>E3EJJ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">msmR5</name>
        <name evidence="2" type="ORF">PPSC2_12115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371151.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24460"/>
    <dbReference type="EnsemblBacteria" id="ADO56547">
        <property type="protein sequence ID" value="ADO56547"/>
        <property type="gene ID" value="PPSC2_12115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2562"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="EHWIECR"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="162"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="31513" checksum="BADA0BDDA75E4C69" modified="2011-01-11" version="1">MDICYCYHGKQVCEPSYSWGPGIKGQYKIMFIHAGRGVYQIDGKTFHLQQGEGFIVYDNILCYMEADPTDPWIYSWIAFSGNGVIPLFEQAHISPLHPVFRYSPLFWFDFYLDEFSACDVNHSTSELRRQSILFRLLADWIDMLVATSQLLPEIRPKDAYIRKAVEFIRMNYNQRVSISEVAHIVGIDRVYLSVLFKEILNVSPQQYLLNLRMDKAGDLLDNSQLSITEVSYSVGYSDPLLFSKMFKKVKGLSPSYFRARLKRDSSMGLSSLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJV0</accession>
    <name>E3EJV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386112.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0307"/>
    <dbReference type="EnsemblBacteria" id="ADO59698">
        <property type="protein sequence ID" value="ADO59698"/>
        <property type="gene ID" value="PPSC2_26645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5628"/>
    <dbReference type="eggNOG" id="ENOG50342AW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_095276_0_0_9"/>
    <dbReference type="OMA" id="SEWIKES"/>
    <dbReference type="OrthoDB" id="1793518at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018775">
        <property type="entry name" value="RlaP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34817">
        <property type="entry name" value="PTHR34817"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10127">
        <property type="entry name" value="RlaP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="29776" checksum="3C62C15127290BFE" modified="2011-01-11" version="1">MKPALSFEAVYGSHNYNLNRPDSDVDMMYYYNPSFEDLYNGKQAEDNIQDGSTDRKHHDVRKLPNLFYKANVNFLEILYSCSVIHYDGLYDLLAAIREEISSMNIPYLYEGCMGMYKRNYRNFQRDSHYVSPEDFKNPELNPIRARKHASSAYRITDFMKRYANQGFKDFAKAIAYDPQLNTDKVFIDSYMAMRDGKYSYVEMCEILKDQETIAEELKGYFKESKVKEDVNRYVIELVEKHVREQLALELTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJX4</accession>
    <name>E3EJX4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386407.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0604"/>
    <dbReference type="EnsemblBacteria" id="ADO59993">
        <property type="protein sequence ID" value="ADO59993"/>
        <property type="gene ID" value="PPSC2_28220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5984"/>
    <dbReference type="HOGENOM" id="CLU_1738733_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="17752" checksum="9602B8F3994EE2C0" modified="2011-01-11" version="1">MNAELEVRLEGLRDVIGVLADHAQKRRDFDAKKAQIAKDMIGLPYYWDKYSGFIKEAKKATEVEVHLTHQTTEDVAIWRLDAIHVYEHLLTIQDFSSWEAYYENQKLGFANSVEDLLLRWGLSQKEIEEKMTEYCSKYDIPYKSYRKVRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK02</accession>
    <name>E3EK02_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ribonucleoside-triphosphate reductase</fullName>
            <ecNumber evidence="1">1.17.4.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EC" id="1.17.4.2" evidence="1"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386435.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0632"/>
    <dbReference type="EnsemblBacteria" id="ADO60021">
        <property type="protein sequence ID" value="ADO60021"/>
        <property type="gene ID" value="PPSC2_28075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5952"/>
    <dbReference type="eggNOG" id="COG1328">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002707_2_1_9"/>
    <dbReference type="OMA" id="TNAGHIT"/>
    <dbReference type="OrthoDB" id="195920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008998">
        <property type="term" value="F:ribonucleoside-triphosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01675">
        <property type="entry name" value="RNR_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012833">
        <property type="entry name" value="NrdD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13597">
        <property type="entry name" value="NRDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02487">
        <property type="entry name" value="NrdD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="620" mass="70179" checksum="068358C59A20C61A" modified="2011-01-11" version="1">MYREDSFLSELDDVIQGSNKDLINENANTDGISPMGMMSLIASITSKRYTEEKLLSKEAWEAYRNGYIHIHDLDFYTTGTTTCCQIPLAKILKNGFNTGHGHMREPKNIMSAMALTSIILQSNQNQQHGGQSIPMFDYDLSKYVRLTFEKKLSEVSELLEQFGETNYKEKAVQIAWDKTDQEVYQACEAFIHNSNSMHSRGGSQTPFISINLGTDTSNEGRMITKNILLATQAGLGDGETPIFPIIVFKVKEGVNFNPEDKNYDLYKLSLITTSKRLFPNYVFIDAPFNLKYYDGTPESEIATMGCRTRTIGNVNGKETPVGRGNLSFTSINLPLIALESKDVNQFYQKLNYYTDVAVQQLYDRYQYQAQKKVSNFKFLYGQGVWHNGEELDPEETLGKILKQGTLSVGFVGLAEALVALTGQHHGESEEAWKMGYNMIQFIRDKTDVASIKYQMNFTTLATPAESFAGKALRITKKRHGVIKGVTDRDYFTNGFHIPVYYKISAFDKIKKEAPFHELTNAGHITYIELDGDASKNIEALDMIVRTMKENGIGYGSINHPVDRCMKCKYKGIIHNACPKCQNDDEKKIERIRRITGYLVGTMDKWNSAKRAEESDRVKHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL18</accession>
    <name>E3EL18_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385994.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0187"/>
    <dbReference type="EnsemblBacteria" id="ADO59580">
        <property type="protein sequence ID" value="ADO59580"/>
        <property type="gene ID" value="PPSC2_27200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5755"/>
    <dbReference type="HOGENOM" id="CLU_1853240_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="15657" checksum="2B639BA250241227" modified="2011-01-11" version="1">MRNWTYSEHDGKHIINDDQGVLVAMVVDAKTAELIIRQHEEAVKVSERIINLPDGLEPMSEEDLKTIWNKADDARGEEAHMSNDVFDLVNALDAAYTQIDSLQQQVAQLRFGRDGFKDHRNELVIANTSPDWQRGTGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL78</accession>
    <name>E3EL78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386324.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59910">
        <property type="protein sequence ID" value="ADO59910"/>
        <property type="gene ID" value="PPSC2_28615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6073"/>
    <dbReference type="HOGENOM" id="CLU_1711456_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="18278" checksum="CFC17DE56018DFE7" modified="2011-01-11" version="1">MRKIIVTEKNIRSIAAQLKRFFNNSSYGYRYFHNYDCGFKNIKPYSDVGIESSVDGIRVSTLMNGESYIEVNYQTDVSREVIRLGSVIVFKGGNEIILQQKWVCPDHFQYSYIVFRLQKLTDYEYEEIARERDFEKRMNDIFDEDWKNEISFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL85</accession>
    <name>E3EL85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PPSC2_28580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59917.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886241.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0528"/>
    <dbReference type="EnsemblBacteria" id="ADO59917">
        <property type="protein sequence ID" value="ADO59917"/>
        <property type="gene ID" value="PPSC2_28580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6065"/>
    <dbReference type="eggNOG" id="ENOG5034AMC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1902501_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59917.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="18341" checksum="77958314EAAC4F2C" modified="2015-05-27" version="2">MINLQERLDRAAKINDLIKYIGEIDKNRYKPLLHSKNEEDTFTQGYFIFAENGLLYFIDSYTRKAIRPIDSARYQRDHYFSHGGNMWWLVQSFAQFIMTGKEGQLRDYKEIWGFDYETTMLVREKAKQIGFISSVDYPHHLYMNPEKRVSKIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBR4</accession>
    <name>A0A0D5ZBR4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599629.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21285"/>
    <dbReference type="EnsemblBacteria" id="AKA44220">
        <property type="protein sequence ID" value="AKA44220"/>
        <property type="gene ID" value="PPSC2_08825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1860"/>
    <dbReference type="HOGENOM" id="CLU_2539415_0_0_9"/>
    <dbReference type="OrthoDB" id="2070200at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10958" checksum="1B8026D645C08761" modified="2015-05-27" version="1">MKWKRLLSLRQWLHVFRRIPRLITSSRIPLGEKLLFAVPVLLYWILPDVMPFMPIDDIGVTLLLMNWFVTRAERKYPDMLEKQHVRVRQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC66</accession>
    <name>A0A0D5ZC66_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">BclA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">bclA</name>
        <name evidence="1" type="ORF">PPSC2_11240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675342.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44233">
        <property type="protein sequence ID" value="AKA44233"/>
        <property type="gene ID" value="PPSC2_11240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2380"/>
    <dbReference type="HOGENOM" id="CLU_148356_0_0_9"/>
    <dbReference type="OrthoDB" id="727194at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="117" mass="12669" checksum="75BC474AB70F2805" modified="2015-05-27" version="1">MAVLSTGPIENSPVSGIRPIQQVTVKIINRDLVNSSTILIQGYILNGLRTLYVLEQIALAPNAVVTRNYLANFDAYEFVFTTSGLAEESTDISVWGKNASGTIIDVQRIVADEQLGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC96</accession>
    <name>A0A0D5ZC96_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44199">
        <property type="protein sequence ID" value="AKA44199"/>
        <property type="gene ID" value="PPSC2_07255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1498"/>
    <dbReference type="HOGENOM" id="CLU_2555124_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="82" mass="9382" checksum="5D3E799B2FF023D2" modified="2015-05-27" version="1">MRRCARTLAHPQQLNVIRRKQIGTALSSRFPVFRRLAVFYMNDMKDSVKKGTFQSKYGSLPKDMLVLSLGFTMLNSTDNIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC99</accession>
    <name>A0A0D5ZC99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885899.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44196">
        <property type="protein sequence ID" value="AKA44196"/>
        <property type="gene ID" value="PPSC2_06135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1259"/>
    <dbReference type="HOGENOM" id="CLU_1281023_0_0_9"/>
    <dbReference type="OrthoDB" id="703698at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="23526" checksum="239CB39ACBDC1B91" modified="2015-05-27" version="1">MILERDCIGYSIDRAIKVDSITVSNFEKIEMLSDCTNYQIHQYNWVDPIKYKEKLISKSTKSVSMIYFKNQLTIFLFGNSESNISYVESRLKRLFSVKFKKVDLYPKIINKLSSNNYKLKVINIQFVRVKDNLEKWVSIDAIGLSKNEFLKIINEENPQTISLYDELNKAYFSVDINSSLSFNDTTTISDIVGVLEYVSSCIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCA6</accession>
    <name>A0A0D5ZCA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886004.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44278">
        <property type="protein sequence ID" value="AKA44278"/>
        <property type="gene ID" value="PPSC2_16140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3447"/>
    <dbReference type="eggNOG" id="ENOG502ZTN1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1473833_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="20934" checksum="39CBECFDC0E2C3DB" modified="2015-05-27" version="1">MNIMIMVQFGSLFLIFFIAFILYSSRLWKVSGLFGSSDVISILLQLVLITWAIVSFFVGLIKMIIVSGLAVSTIVLTMGIPILLIAFFSIKIYRNYFITRQELKRMKNASVLCKQWASSFPFISEENTQLKLHLREGKPEGKMIITNVTEEQASELYSQKQDLPKGIFLDVYPVKEDNKNLIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCQ4</accession>
    <name>A0A0D5ZCQ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44341">
        <property type="protein sequence ID" value="AKA44341"/>
        <property type="gene ID" value="PPSC2_26025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5475"/>
    <dbReference type="HOGENOM" id="CLU_2736280_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="71" mass="8190" checksum="95AF5C3AF360A432" modified="2015-05-27" version="1">MFVAGFLALTTVRLSNNIMYSRLTKHMSMNINSFKVYHEFSYVSQRAAIAERFQEEFIVAIETAITSDIHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E482</accession>
    <name>E3E482_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Peptide synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nrpS3</name>
        <name evidence="8" type="ORF">PPSC2_12460</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371226.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2653"/>
    <dbReference type="EnsemblBacteria" id="ADO56622">
        <property type="protein sequence ID" value="ADO56622"/>
        <property type="gene ID" value="PPSC2_12460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2642"/>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_0_18_9"/>
    <dbReference type="OMA" id="HTVMEPE"/>
    <dbReference type="OrthoDB" id="961884at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010071">
        <property type="entry name" value="AA_adenyl_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010060">
        <property type="entry name" value="NRPS_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01720">
        <property type="entry name" value="NRPS-para261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0045">Antibiotic biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="986"/>
            <end position="1060"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="2506"/>
            <end position="2580"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="1021"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="2541"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="3119" mass="354611" checksum="D0538FABD52F6988" modified="2011-01-11" version="1">MSKSLEIEKVANLTPLQEGMLFHTVMEPESQAYYEQVRMTIRGELNLEALQKSFQTLVQRHEALRSNIYHQSASRSRLIVFKERNAVLRYENLINIPEAEQAAAIRSYADTDRNQRYDLSKDLLIRLTVLQTKTHVYTLLLSFHHIIMDGWCLGIVMEELFAAYEALKAGKTVQLPTPQPYTGYARWLDKQDKKAAKEYWQSILNSYDQPAVLPTLPVAHSLLADTGYLLHEHKITLTDETTRHLRTVAEHNGTTLSSLFLAAWGVVLGGYNQSEDVVFGTVVSGRPPELAGVEQMLGLFINTIPVRIKWDADQPFSSLLREVQRNMVQSRAYDYCSLAEIQAQSVLKQQLMDHFVVFENYPLEDIVGRPDLQERLGFVVEDAQLSEETPYHFNIEVEDGKALGFMLSYNSYVYSDEAMKRLAGHLEHVLVQIAHAPELPLEDIRLLTASEKAELTNVWSGPVAAYPAGTFHGIFEAQAERVPEQTAVIYEDTALTYHELNEKANLLAQALQSRGVEHEHLVAVMLERSADMIIAVLGIMKAGAAYVPVDPTYPKERITYMLQDSRATIMLTQSSLTELLADVDFAGEVLDLPVLLQQASQAEQAYQQGPTYTPIHDPEALAYVIYTSGTTGNAKGVMIEHRHYVNTAWGYREAHQLKEFPVKLLQIASMSFDVFAGDLAKTFVNGGTMVICPQDVRNDPPALAQVLEQHKITTFEAPPALLTLLMDYVYEHGTDVSAMKLLTTGADSFGVDNYRTLLNRFGDTMRIMNTYGVTEAAIDSSFYEETAERLPSSGIVPIGKALPNHKVYILDEALRSLPIGVTGELCLGGASVARGYLHRPDLTAEKFVPNPFVNGERLYRTGDLARWLPDGNIDFIGRVDFQVKIRGYRIEPGEIESALLQLDEVRQAVVTDRTDKTGQKYLCAYVAGTADKSFLRTELAKQLPSYMVPQHIIVLDQLPLTHNGKIDRHALPEPEGFVLTNIEYEAPRSELEQTLASIWEEVLGVKPIGLRNNFFELGGDSIKALQIAARLNAKDLKMDMKDLFRHPQIDLIVPYIKTITRIIPQGAVQGAVELTPIQWEFFEYHQTERHHYNQVVMLQNTERWNETWLRSAMDKLTTHHDALRITFDEREKEPVAYNRGTAEGECFTLESYNLLHADQPEAEILQLADALQRGFDLRNGPLVRLALFRLQEADHLLIVIHHLVVDGVSWKILLEDLEKAYQQAANGQKLQLPAKTDSYKEWAARLSKYAHSAQVRQEINYWNEVEAREIRPLPKDHEVSVSLIRDAHQSEVTLSREETENLLKHAHHAYNTEINDILLTALGLAFYEWSGHAEIAVQVASHNRTDCIKDIDVSRTVGRFTSVYPFVIHVSKPEDQAYQIKLVKDNLRRVPNQGAGYGILRYLTNREQQDKTTLFSAKPPEISFSFDEETREGTTWRTSALSMFAGSAISPLTEKAPGFGIHGVVAKERLSIVFEYNAHEYEESTVTQLTASFKNHLIELIRHCCAKETAEQSPTDFTYGQLSLDQFENIANRLTDKLLNHQVKIKDLYPLSPMQEGMLFHAIADEKSEAYFEQTIITIHEAMDTDLISRSLQRLIDRYDIFRTVFVYKETDRPLQVVLEERSATPVHTEDVRGLPEAEKQRRLQAILQEERQRGFDLEKEVLIRLALVQWDEDISKLIWISHHIIMDGWCLRTVAKDFFEIYTSLRDDTPLTLEPVYPFSSFIQWLKRQNKEEAAAYWNHFVDDFENETVVPGYTRSVDSSFQAEQLICTWGEQLTQGMEQIAKQNRVTVSTLFQTVWGLLLQAYNNSNDVIFGSVVSGRPDEIPGIENMIGLFINTIPVRIKSSAELRFSDLLTSIQDSLMESNRYSYFSLADIQAHSVLKQNLIQHIVAFENFPVSEELVDTEVKSKSLRVGKVEDIEQTNYDLNVIVMPGRELEIKFSYNALTYNKNAIKQLAAHLIQIMEQVIQNPNIRVSEIDLLTAEEKQQILFEFNDTRRPYPSDHTIHRAFKEQAEKTPEAVAVLFEDCELTYRELNIKANQLASKLRKLGVVSETIVGILTERSPEMIIGILGILKAGGAYLPLEPSYPQERIMFMLQDSGSEILLTLSGKGKQMNTFNFSGMVLDLADINSYDSDDFILSESMTADDLAYVMYTSGSTGRPKGVMIEHRNVIRLVKNTNYMPFAENERILLTGALVFDACTFEIWGALLNGLRLYIVPESVILDAVQLGEALDRYHITTMWMTSPLFNQLTQHKPNLFASLNHLLVGGDVLLSGIINTVRSHSPGLNVINVYGPTENTTFSTYFPIDKEYNSIPIGRPIGNSTVYILDSSSRLLPIGAQGEICVGGDGLARGYLNRDDLTQLNFVPNPFIPGEKMYRTGDLGRWLPDGNLEYLGRIDQQVKIRGFRIEPGEIETQLMRHDAVQEAHVTVKSTNDGQKTLCAYISTDVPLSKSDMKTHLTGQLPDYMIPAQYVFLRAFPLTTNGKIDRQALPEPEMASGTDMEYVAPTNEVEQQLADLWQAVLGVEKVGIDDGFFELGGHSLKAIQLVSKMQESNIPLDIHQLLRYQTIRNLAKLLQRGEEGGENTDTLIAKTQEVEQAIADAFGVQAWLHFVSADKQDYLFLQVKPFHTEQVQAITAFIQSRIHPDLHPHYIVRWGTDEPDRIFGTLPTNEEQETLLKLQADEWLASIAESNISWNTNILSLNAIGCYPLAPAQQYHLQHFTGSGMAIQLDSYLDTERLTATVQRLLHRHELLRSVLVQSSRAWEWELHPAPEHLSIPIVDLSDQPVQAQRRLLLSIASSLFLEPYELTQSLQYRIVLVRLNLREHLLLFPCSHIIFDATSSDILRRQLLDEYHHPQQEYTIEEVQYRDYVNHIRQGPQGIRDQEISEQFELQRFGENNERIHALTEERNYADTTRYRWTLNLDGISEQHGPAMMWEISLQMAVRFFSSYFEGSDVPLWLTNYGRQYGDRNYFGIVGECIDHIPVVLQEDDMEPYEKSIHTHLDFASRYHLNFFNLIFNAEMEEAYPVSSSFLKKGLGQLPIVFNYLGEGRDDAELLDNLYTESTQTNVNKVIFFESEHVGDILKISLTIPYKENRQYIHQIFQTASDRLLNALTILQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4A6</accession>
    <name>E3E4A6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfkR1</name>
        <name evidence="5" type="ORF">PPSC2_12580</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371250.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2678"/>
    <dbReference type="EnsemblBacteria" id="ADO56646">
        <property type="protein sequence ID" value="ADO56646"/>
        <property type="gene ID" value="PPSC2_12580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2670"/>
    <dbReference type="eggNOG" id="ENOG502ZA76">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051140_3_1_9"/>
    <dbReference type="OMA" id="CYKEGNK"/>
    <dbReference type="OrthoDB" id="693789at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168599" evidence="4">
        <location>
            <begin position="25"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="42576" checksum="54743C3E94A101D8" modified="2011-01-11" version="1">MKLRKASLIILTLLLSLPLMTSCASLTENNTIEEIAPVTFLSLSEGSEGKIKISTLAPPLTHDSKKLVTKEVHMLEEGRKYLSLNYFREYKLGQLRMLFISESLARKGIASIVTSLLLDPETTQRLYLVVVDGNFDEYIMTNTEKQKDLEYFLYRMFKHYENKQQGTMTVINLHRFLQKYHNPLSDPVLPVFEATPDDFKYEGTGLFQKDKMAGKLSLRQDHIFQLLDNVNYIKLLPLPEFSILLGQVRSKVDLHWNRGDSIYAVNVNLYARLVEYQGDRYLGDTNNLMELQSEIENFLKERTTELLQKMQKWDVDPLSMGYVALHPFSKPISGEEWQKTKRSLNYQVKVHLTLNPLPAIPSYQYHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4E4</accession>
    <name>E3E4E4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lplA5</name>
        <name evidence="2" type="ORF">PPSC2_12730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371288.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00150"/>
    <dbReference type="EnsemblBacteria" id="ADO56684">
        <property type="protein sequence ID" value="ADO56684"/>
        <property type="gene ID" value="PPSC2_12730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2707"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021021_2_0_9"/>
    <dbReference type="OMA" id="MGLNELM"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168814" evidence="1">
        <location>
            <begin position="18"/>
            <end position="541"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="541" mass="61188" checksum="B7D8DB058C79AD9F" modified="2011-01-11" version="1">MKLFKRAGILMLAGVFALSGCSGGGGESKNQTVNPDQDANFNKTGLPIVKKAVTLKMVSPKAALAPDYSKMEIFKRLEKQTNVKIDWENIPDTDFAEKKNLLLASGDLPDAFYGAGFTDYELINYGKDGTIIPLENLIDQYAPNLKALLDRRPDIKLAITAPDGHIYGLPSWEENKLDTNPFFHVINKNWLDKLGLKVPQTLDEYTQALIAFKTKDPNGNGKADEIPLSFMHMQWCSDIAGIFGAFGIPDNLEHRIVREGKVIFTASQPQYKEALKYIHDNWYKQGLIDPESFTQDAAQYLAKGKTLDETLGSYVWWEVEEVVGPERSKDYALLPPLKGPNGDQMIGRNNGGGPGRGSFVITKENRYPAMTMRWIDQQYDPYMAAQIHWGPLDVVFKKDEKGKMVNLPLPQGVSAGEFRQKVAPGTGNPGVITFDDFGKVVDMEPRAQKRAEYLEKYYTPYMKKENYPSIFFEPDELDKINRIEPELIKYVNTQRGKFIVDGEVDEKWDSYVKTLEKMGLNELMEIYQKGLDRYNANLKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G9</accession>
    <name>E3E4G9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371471.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01305"/>
    <dbReference type="EnsemblBacteria" id="ADO56868">
        <property type="protein sequence ID" value="ADO56868"/>
        <property type="gene ID" value="PPSC2_13615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2897"/>
    <dbReference type="eggNOG" id="ENOG5030NGC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1480641_0_0_9"/>
    <dbReference type="OMA" id="PTMYNDF"/>
    <dbReference type="OrthoDB" id="1363962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168606" evidence="1">
        <location>
            <begin position="27"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="20851" checksum="380E09A9E7DC8C7D" modified="2011-01-11" version="1">MVQTISKLLGALLAVLLLYIVPAAQAAERQDDISGLNTYHSTVHFVDMVRTKGYITPTMYNDFMRDLELTGNTYEVDLEHMHKKYVPNYADAAKPDSFLGNYEAVYDGYYNPQILPVLFPDNSQPKSEQTRRYTLMAGDYFTVRLHNTNRTPADLYKSWILGGIDNDKPAVSASYGGMVLNEDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S2</accession>
    <name>E3E4S2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">4-hydroxy-tetrahydrodipicolinate reductase</fullName>
            <shortName evidence="9">HTPA reductase</shortName>
            <ecNumber evidence="9">1.17.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dapB</name>
        <name evidence="12" type="synonym">dapB3</name>
        <name evidence="12" type="ORF">PPSC2_14470</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(S)-2,3,4,5-tetrahydrodipicolinate + H2O + NAD(+) = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:35323"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16845"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:67139"/>
            <dbReference type="EC" id="1.17.1.8"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(S)-2,3,4,5-tetrahydrodipicolinate + H2O + NADP(+) = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:35331"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16845"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:67139"/>
            <dbReference type="EC" id="1.17.1.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 4/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the DapB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction.</text>
    </comment>
    <dbReference type="EC" id="1.17.1.8" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371649.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02120"/>
    <dbReference type="EnsemblBacteria" id="ADO57050">
        <property type="protein sequence ID" value="ADO57050"/>
        <property type="gene ID" value="PPSC2_14470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3088"/>
    <dbReference type="eggNOG" id="COG0289">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047479_0_1_9"/>
    <dbReference type="OMA" id="HHPNKAD"/>
    <dbReference type="OrthoDB" id="803114at2"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00018"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008839">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate reductase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016726">
        <property type="term" value="F:oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00102">
        <property type="entry name" value="DapB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022663">
        <property type="entry name" value="DapB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000846">
        <property type="entry name" value="DapB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022664">
        <property type="entry name" value="DapB_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023940">
        <property type="entry name" value="DHDPR_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20836">
        <property type="entry name" value="PTHR20836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05173">
        <property type="entry name" value="DapB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01113">
        <property type="entry name" value="DapB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000161">
        <property type="entry name" value="DHPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00036">
        <property type="entry name" value="dapB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01298">
        <property type="entry name" value="DAPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0520">NAD</keyword>
    <keyword evidence="4 9" id="KW-0521">NADP</keyword>
    <keyword evidence="6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DapB_N" evidence="10">
        <location>
            <begin position="5"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="DapB_C" evidence="11">
        <location>
            <begin position="132"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="region of interest" description="(S)-2,3,4,5-tetrahydrodipicolinate binding" evidence="9">
        <location>
            <begin position="166"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="9">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="9">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="11"/>
            <end position="16"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="100"/>
            <end position="102"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="126"/>
            <end position="129"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF05173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="267" mass="29249" checksum="3B9863ACB50B0547" modified="2011-01-11" version="1">MSEPIKVAVVGAAGRMGREVVKLVLQDEELQLVAAVNRTHAGSDAGLLVGLPEAGIAIMEDVEQALLESRADVMVDFTGPRFAYAHTALAIKHGVRPVIGTTGFTPEQIDELDKQCREQQIGGLIAPNFSIGVILMMRFAAQAAKYFPHLEIIEYHGDQKLDAPSGTAIKTAELIAEQREELRQGNPEEEETLEGSRGGYYQGFRIHSVRLPGVFAQQEVVFGGFGQSLKIRQDSYERAGYMPGVKIGIQKVMEHPGLVYGFEHYID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U9</accession>
    <name>E3E4U9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 3">Nucleoside diphosphate kinase</fullName>
            <shortName evidence="1">NDK</shortName>
            <shortName evidence="1">NDP kinase</shortName>
            <ecNumber evidence="1 3">2.7.4.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Nucleoside-2-P kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 5" type="primary">ndk</name>
        <name evidence="5" type="ORF">PPSC2_14600</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'-deoxyribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:44640"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a ribonucleoside 5'-diphosphate + ATP = a ribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:18113"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the NDK family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.6" evidence="1 3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371674.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02250"/>
    <dbReference type="EnsemblBacteria" id="ADO57077">
        <property type="protein sequence ID" value="ADO57077"/>
        <property type="gene ID" value="PPSC2_14600"/>
    </dbReference>
    <dbReference type="GeneID" id="66577060"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3115"/>
    <dbReference type="eggNOG" id="COG0105">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060216_6_3_9"/>
    <dbReference type="OMA" id="KIVAMKM"/>
    <dbReference type="OrthoDB" id="1752581at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004550">
        <property type="term" value="F:nucleoside diphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006241">
        <property type="term" value="P:CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006183">
        <property type="term" value="P:GTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006165">
        <property type="term" value="P:nucleoside diphosphate phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006228">
        <property type="term" value="P:UTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.141">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00451">
        <property type="entry name" value="NDP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034907">
        <property type="entry name" value="NDK-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036850">
        <property type="entry name" value="NDK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001564">
        <property type="entry name" value="Nucleoside_diP_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023005">
        <property type="entry name" value="Nucleoside_diP_kinase_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00334">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01243">
        <property type="entry name" value="NUCDPKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00562">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54919">
        <property type="entry name" value="SSF54919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00469">
        <property type="entry name" value="NDP_KINASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NDK" evidence="4">
        <location>
            <begin position="1"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="active site" description="Pros-phosphohistidine intermediate" evidence="1">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="16436" checksum="D85AAF359A3CF304" modified="2011-01-11" version="1">MDRTFLMVKPDGVQRGLIGRIVSRLEDKGFKMAAGKLVQVSREQAERHYAEHVGKPFFEELVGFITSGPVFAMVWEGDNIVTLSRLLIGKTQVTEALPGTIRGDFAAHTPFNLIHGSDSPESAEREIANFFTPEELVRYEKTVATWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4W1</accession>
    <name>E3E4W1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rbsC3</name>
        <name evidence="7" type="ORF">PPSC2_14655</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371686.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02300"/>
    <dbReference type="EnsemblBacteria" id="ADO57089">
        <property type="protein sequence ID" value="ADO57089"/>
        <property type="gene ID" value="PPSC2_14655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3127"/>
    <dbReference type="eggNOG" id="COG1172">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028880_4_3_9"/>
    <dbReference type="OMA" id="YTQDFVK"/>
    <dbReference type="OrthoDB" id="1254678at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="120"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="171"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="223"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="253"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="277"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="301"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="35001" checksum="68C99E668A828EF4" modified="2011-01-11" version="1">MKEKWLNVSFRYGAVVVIIGVLAFFSATLPYFWTYDNLMDILGSIAIVTFVAIGVTLSLIVDGFDLSVGATVSLTTVVSASLMVWYEQPVAVVIIVALVVGALVGLLNSLLIIKLRIPDLLATLAIMYIVSGVHQTYAQGYTIYNHMQFPDGSKAPGEISPAFLLLGQGKWLGIPISVILLLLAVAAVHVFLIYTKHGRQMYVTGGNEEAARLSGIRVKKVRTLAYIASGVFAAIAGILYASRVGSGQIDAGSPLLMEAVAAVFVGFSVFGAGKPNVIGTFIGAVLIGVLVNGLTMMNVQYFAHDIVKGVVLVLALAVTFYVLNRRRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5T4</accession>
    <name>E3E5T4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycerol dehydrogenase</fullName>
            <ecNumber evidence="8">1.1.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gldA5</name>
        <name evidence="8" type="ORF">PPSC2_18690</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.6" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372539.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05910"/>
    <dbReference type="EnsemblBacteria" id="ADO57961">
        <property type="protein sequence ID" value="ADO57961"/>
        <property type="gene ID" value="PPSC2_18690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4005"/>
    <dbReference type="eggNOG" id="COG0371">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044754_1_0_9"/>
    <dbReference type="OMA" id="GECSRQE"/>
    <dbReference type="OrthoDB" id="717704at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008888">
        <property type="term" value="F:glycerol dehydrogenase [NAD+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016205">
        <property type="entry name" value="Glycerol_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43616">
        <property type="entry name" value="PTHR43616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000112">
        <property type="entry name" value="Glycerol_dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00913">
        <property type="entry name" value="ADH_IRON_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="3 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Fe-ADH" evidence="7">
        <location>
            <begin position="8"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="94"/>
            <end position="98"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="264"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="377" mass="40127" checksum="886041838017D803" modified="2011-01-11" version="1">MRKAFISPSKYVQGENELLNLGYYVSTFGKSALLIAHPADVERVKDKLDSTTEKYNVTFIESGFMGECSRQEVSRLQEIATANRCDCIVGLGGGKAIDAAKCVAQGEALIICPTIAATDAPTSHSAVLYTPEGAFDDYAYFKQSPSVVLVDTTVIANAPTRFLVSGMGDALSTYFEARATSRSYSRVNAGLPNGVREGQCAPAVGTNAALALATLCYEMLLKDGAKAKAACDENQVTQALENIIETNILLSGLGFESGGLAAAHAIHDGLTILEGTHHYYHGEKVAFGTIAQLVLENAPTEELHQVLDFCLTIGLPVCLADIGVDHISREELMEVAAKACIEEESIHAMPFPITVEQVAAAIAAADRIGSQYKAEVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y8</accession>
    <name>E3E5Y8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">UDP-glucuronosyltransferase c-terminal protein, ypfp like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372779.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07135"/>
    <dbReference type="EnsemblBacteria" id="ADO58207">
        <property type="protein sequence ID" value="ADO58207"/>
        <property type="gene ID" value="PPSC2_19915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4244"/>
    <dbReference type="eggNOG" id="COG1819">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_721292_0_0_9"/>
    <dbReference type="OMA" id="WGMGTYR"/>
    <dbReference type="OrthoDB" id="491477at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="44196" checksum="3294C93527C801A1" modified="2011-01-11" version="1">MRKSTEKLMKVTILCSGFGLGFYTPGLLLQAGLRRLGMDTAIHVFENVLPESARLKVDKSRKAYHDNFAVALMSQKVPQDMRNSLDPAAMEVLLNQWIEEDRRYFICLSGHWMYVLEEYRKRRESESVHVDIVYMDSTPSPSWKNLAKHNPHFADGCGETTLFENDKNRVNHYIDIPAVEHIPFEARQARLFVHGGGWGMGTYREKVGRLEEAGWELDLLLYDQDQPDEERDSIRYFRMDPQWRTWQRNEAGEHTFPPFGEVKIGDETVYQVGPDYHCMLDRACHAQAIVSKPGGGSLTDSFATATPLIMLEPFGVHEKHNADLWERLGLGMRYETWIETYGASAQILEEMHRRIVELRSRTPRYIESYMKSIQVPSGMEQGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E616</accession>
    <name>E3E616_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372807.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07270"/>
    <dbReference type="EnsemblBacteria" id="ADO58235">
        <property type="protein sequence ID" value="ADO58235"/>
        <property type="gene ID" value="PPSC2_20040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4272"/>
    <dbReference type="eggNOG" id="COG2730">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023504_2_0_9"/>
    <dbReference type="OMA" id="QSGHNSE"/>
    <dbReference type="OrthoDB" id="393364at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025277">
        <property type="entry name" value="DUF4038"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13204">
        <property type="entry name" value="DUF4038"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4038" evidence="1">
        <location>
            <begin position="10"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="426" mass="49101" checksum="0926194C91DB72EE" modified="2011-01-11" version="1">MICLSLSIAKNQRSFVEKDKPFFYLADTVWSVFTNATIEEWSDYLDYRKMQGFNVLQINMLRQWDASESDLNLQPFALLENGDFDYHTLNAAYFDRAEVMIQMAVERGFIPALVLLWCNYVPDTWAEMFQKGNKMPLDCVESYVTYVVNRYSRFEPVYLISGDTDFPTERANAYYLKALETVQQLSPASLTALHIQGRLRGIPEAFEQHKGLGFYMYQSGHNSQFQHVAHEIAQHFYHKPEIRPVINGEPCYEQISYSRNVYGRYTALDARKAAWQSLLAGGGAGITYGAHGIWSWHKKGKKFGIVEGEGFDSPYDWRTALRFEGAWDYSFIKYLFEMYNLIGIKPLDIVLNKTEEIRAAGNENTIVLYIPVNTKVRLSMNLQDYKFITIDLAERRFAQTEVDAQADQSVIDMHGFESDVVIIGTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E675</accession>
    <name>E3E675_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yfiE</name>
        <name evidence="2" type="ORF">PPSC2_13095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371364.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00775"/>
    <dbReference type="EnsemblBacteria" id="ADO56760">
        <property type="protein sequence ID" value="ADO56760"/>
        <property type="gene ID" value="PPSC2_13095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2788"/>
    <dbReference type="eggNOG" id="COG2514">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059557_0_0_9"/>
    <dbReference type="OMA" id="GGYHHHM"/>
    <dbReference type="OrthoDB" id="1335734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004462">
        <property type="term" value="F:lactoylglutathione lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018146">
        <property type="entry name" value="Glyoxalase_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00934">
        <property type="entry name" value="GLYOXALASE_I_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="10"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="170"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="31785" checksum="BA13F852F6E30CB7" modified="2011-01-11" version="1">MTAHIHDNTKIGQVSLKVSNLERSIQFYTEVVGLQLLRQTADTAELTVDGKHALLILNYIENAVILPRQSVAGLYHFAILLPNRVALGLSLRNLLAHEIEIGQGDHDVSEALYIHDPDNNGIEIYADRPRDQWKRDAHGFYMMGTGPVDAEDLIAISENLPWQGLPQGTVIGHVHFHVSNLRTAQQFYCDVLGFDITCRYGSSALFVSAGGYHHHMGLNIWAGEGAPPAPEQAAGLDYFELIVPDQQELDAITARLTAAGYGLQKRDGALYVADPFRIQIKLVQGQTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D4</accession>
    <name>E3E6D4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="17">PTS system glucose-specific transporter subunit IICBA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">ptsG3</name>
        <name evidence="17" type="ORF">PPSC2_18880</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372580.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E6D4"/>
    <dbReference type="STRING" id="1406.LK13_06090"/>
    <dbReference type="EnsemblBacteria" id="ADO58003">
        <property type="protein sequence ID" value="ADO58003"/>
        <property type="gene ID" value="PPSC2_18880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4047"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_1_1_9"/>
    <dbReference type="OMA" id="AWAFNRF"/>
    <dbReference type="OrthoDB" id="2035550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005355">
        <property type="term" value="F:glucose transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036878">
        <property type="entry name" value="Glu_permease_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018113">
        <property type="entry name" value="PTrfase_EIIB_Cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001127">
        <property type="entry name" value="PTS_EIIA_1_perm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001996">
        <property type="entry name" value="PTS_IIB_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011299">
        <property type="entry name" value="PTS_IIBC_glc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00358">
        <property type="entry name" value="PTS_EIIA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00367">
        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55604">
        <property type="entry name" value="SSF55604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00826">
        <property type="entry name" value="EIIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00830">
        <property type="entry name" value="PTBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02002">
        <property type="entry name" value="PTS-II-BC-glcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51093">
        <property type="entry name" value="PTS_EIIA_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00371">
        <property type="entry name" value="PTS_EIIA_TYPE_1_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51098">
        <property type="entry name" value="PTS_EIIB_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01035">
        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="66"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="123"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="211"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="278"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="303"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="326"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="357"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="380"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="16">
        <location>
            <begin position="3"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="15">
        <location>
            <begin position="428"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-1" evidence="14">
        <location>
            <begin position="551"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="506"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO58003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="681" mass="72836" checksum="37091211C02CDA39" modified="2011-01-11" version="1">MFKKLFGVLQRVGKALMLPVAILPAAGLLLGIGNMLVNPDFLQYIPALNAGWVQSVATIMMNAGQIVFDNLALLFAVGVAVGLAGGEGVAGLAAIIGYLVMNITLGTAVGVTPGLIAQKIPGYANVLGIPTLQTGVFGGIIIGILAAAMYNRFFKIELPSYLGFFAGKRFVPIATAVSSLIVGLALVLIWPPVQQGLNAVSHFMVYSNPTLSAFLFGVIERALIPFGLHHIWYSPFWFEFGEYVNKAGQTVHGDQQIFFSQLRDGVALTASTFQVGKFPFMMFGLPAAALAMYHEARPEHKKYVAGIMGSAALTSFLTGITEPLEFSFLFVAPLLFAVHCVFAGLSFMTMQILNVKIGMTFSGGFIDFLIFGIIPTRTPWWYVIIVGLILAVIYYFGFRFIIRKFNLKTPGREEATENVDGAASGSSDELPHNILAAFGGSSNIKHLDACITRLRIEVNEKSNVDKARLKQLGASGVLEVGNNVQAIFGTRSDTIKTQMADIMAGRTPAPAPSEPAPQEEKEAGEQKQTIVVEDIVMPVNGELVDISTVPDPVFAERMTGDGFAVVPNDGTIVSPVYGKVFNVFPSKHAVGIQSDGGKEVLVHIGVNTVKLKGQGFDVLVNEGDLVSAGQPIMKVDLEYVKANAKSIVSPVIFTNLPEGSSVTLNKTGVLKAGEDGIITIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D9</accession>
    <name>E3E6D9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Galactose-1-phosphate uridylyltransferase</fullName>
            <shortName evidence="10">Gal-1-P uridylyltransferase</shortName>
            <ecNumber evidence="10">2.7.7.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">UDP-glucose--hexose-1-phosphate uridylyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">galT</name>
        <name evidence="13" type="ORF">PPSC2_18905</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>alpha-D-galactose 1-phosphate + UDP-alpha-D-glucose = alpha-D-glucose 1-phosphate + UDP-alpha-D-galactose</text>
            <dbReference type="Rhea" id="RHEA:13989"/>
            <dbReference type="ChEBI" id="CHEBI:58336"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="ChEBI" id="CHEBI:66914"/>
            <dbReference type="EC" id="2.7.7.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Carbohydrate metabolism; galactose metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the galactose-1-phosphate uridylyltransferase type 2 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.12" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372585.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06115"/>
    <dbReference type="EnsemblBacteria" id="ADO58008">
        <property type="protein sequence ID" value="ADO58008"/>
        <property type="gene ID" value="PPSC2_18905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4052"/>
    <dbReference type="eggNOG" id="COG4468">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047799_0_0_9"/>
    <dbReference type="OMA" id="IVDWPMS"/>
    <dbReference type="OrthoDB" id="801432at2"/>
    <dbReference type="UniPathway" id="UPA00214"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008108">
        <property type="term" value="F:UDP-glucose:hexose-1-phosphate uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00571">
        <property type="entry name" value="GalP_UDP_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000766">
        <property type="entry name" value="GalP_uridyl_Trfase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023425">
        <property type="entry name" value="GalP_uridyl_Trfase_II_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005850">
        <property type="entry name" value="GalP_Utransf_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005849">
        <property type="entry name" value="GalP_Utransf_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39191">
        <property type="entry name" value="PTHR39191"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02744">
        <property type="entry name" value="GalP_UDP_tr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01087">
        <property type="entry name" value="GalP_UDP_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01163">
        <property type="entry name" value="GAL_P_UDP_TRANSF_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="5 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 10" id="KW-0299">Galactose metabolism</keyword>
    <keyword evidence="7 10 13" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GalP_UDP_transf" evidence="11">
        <location>
            <begin position="99"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="GalP_UDP_tr_C" evidence="12">
        <location>
            <begin position="279"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="547" mass="61857" checksum="D690956B7DE4991D" modified="2011-01-11" version="1">MSERQSVDKDQDRELSRHLAHDIDETVQQSALYAVEQLVAFAQKKGLIGLQDTDYSRNLLLEQFGFSEPYSGGEAGGIIAPEALQPVLNVLIDYGFAIGLIPENTDTYRDLLDSKIMGQLMARPSEVIRDFHQTEAELGIEAATDAFYQLSIDSNYIRMDRVASNVYWNQSTPYGDMEITINLSKPEKSPKEIAMAKLLPPPVYPKCQLCRENVGYAGRVNHPSRQNLRIIPVELNGEPWFFQYSPYVYYNEHCIVFHHDHVPMKLTKDTLRRLLAFTKAFPHYFIGSNADLPIVGGSILTHDHFQGGRHTFPIEKAGVDGVYHNEAFPQVTAGIVNWPMSVIRFTSTDAEALLEAGNAAFEAWKGYSDPSVDVLSHTELEGETIPHNTVTPIVRRDSEGRYQMDLVLRNNRTSEEYPEGIFHPHREMHHIKKENIGLIEVMGLAILPGRLKDELDGIADILCGNDELAVAMQQEEHPLFKHADWIYQLNTRFGRLSDKETAVRIVQNEVGLKFSEILEHAGVYKRNPSGQQAFGRFMKQLGYTLGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6I0</accession>
    <name>E3E6I0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">yvcC3</name>
        <name evidence="11" type="ORF">PPSC2_19100</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372624.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06300"/>
    <dbReference type="EnsemblBacteria" id="ADO58049">
        <property type="protein sequence ID" value="ADO58049"/>
        <property type="gene ID" value="PPSC2_19100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4092"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="ATPMVTK"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="83"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="158"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="185"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="263"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="300"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="47"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="358"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="391"/>
            <end position="398"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="605" mass="67116" checksum="67DE88ACA2BD6A84" modified="2011-01-11" version="1">MEKEHHGRQDEQEDRTKEKPGKRPDKAGMGRFIKLIASAHPPKAILIIALILTLIQTIAGLIVPMMTKGLIDGLTFSSLNRMVIIGLLGAFVLQAVASAVSIYMLNYAGHKIVANLRKRLWHKILSLPIPYFDRNRSGDTMSRVTNDTSLIMNLITEYLVNLISNVIAIIGGIALLFYLDWVMTLIIMTIVPLTALILFPVGRKMYRISKKQQDEMADLTSVLSQVIGEIRLVKAYGTESREAQAGEDRIYRMFRFGLQESRILALVGPISTFLLTAVLVIILGVGGVRVASGVLTAGDLVAFILLLFQVITPMAQFTTLYSRLQKVVGATERIQTILDHEEEPLELKQEAAKESRDIVFRDVAFSYTEGEEVLHHANLVIPANRTTAFVGPSGSGKSTLFSLLERFYVPDTGEIRYGDESISSYTLSSWRSKIGYVSQESSMMTGTVKDNITYGLGREADLEEVRRAAMMAYADTFIMDLPQGYDTEVGERGMKLSGGQRQRIAIARALLRSPDILMLDEATSSLDSSSEHEVQKALANLMEGRTTIVIAHRLSTVVHSDQIIVLDKGNVTGAGTHTELLETHQVYRELAQKQFVEMGEKLHTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-10-07" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6T0</accession>
    <name>E3E6T0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_21265</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4533"/>
    <dbReference type="EnsemblBacteria" id="ADO58482">
        <property type="protein sequence ID" value="ADO58482"/>
        <property type="gene ID" value="PPSC2_21265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4519"/>
    <dbReference type="eggNOG" id="COG5487">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_187346_2_1_9"/>
    <dbReference type="OMA" id="LRWTVIF"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01361">
        <property type="entry name" value="UPF0391"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009760">
        <property type="entry name" value="DUF1328"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07043">
        <property type="entry name" value="DUF1328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036466">
        <property type="entry name" value="UCP036466"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="55" mass="5994" checksum="DAB06BBDE1242F8B" modified="2011-01-11" version="1">MLKWSALFLVFAVIAGILGFFGIVVSVAATIAKMLFVLFLVLFVISLFTGRKRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C3</accession>
    <name>E3E7C3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_24360</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373668.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11855"/>
    <dbReference type="EnsemblBacteria" id="ADO59134">
        <property type="protein sequence ID" value="ADO59134"/>
        <property type="gene ID" value="PPSC2_24360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5158"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_0_9"/>
    <dbReference type="OMA" id="WGNDITT"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="312"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="481"/>
            <end position="586"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="587" mass="69188" checksum="1E38F13DFC56DF42" modified="2011-01-11" version="1">MKRLRTILDHIRLRDKMLLLYFLCVFTPIVLTNLIFYHVTSQNVKEQRIQDITRALEQIKIEFHREFEDAMEISSIFYTDYRLNEVLEETYPHPADYIAVYDTYLRRILNNTYSPVYQSVGGITIYTDNSTLLNSGGISFIDERVKSFPWYTQIPPGRQSKPIFVRTDDSTDEQTHPFSLIRRMNYFYSPSGREKILKIELRMSSIREIFNNLNLQGSLFLLNERGEIEYTNDPKVDINHKSVAYSTLKLPENTMEFKTSYVLTNNLNGWSIVAAVSRDEVLYEMQEPRNFALLLTCVNMLLPTLIIIWITRSLNVRLHRILKHVKKVKNQHFELIPGMESSDEIGQLTGEFNRMTLRIKRLINDVYMADIQRKNLEIQRRHAQLNALHSQINPHFLFNALETIRMRSLMKHEDETARIIHNMARIFRNSLVWNKDRVTLRDELELIRCFLEIQQYRFGERIQYDVQARSEDLDNLIPKMVVLTLVENASIHGIEPLKHGGRIEILFEHEEGRLILTVRDDGVGMSVEQVQRLYGYMQRQEEMGERIGLQNVIYRLKLYYGKRFELAIRSAPGEGTEIRIMIPADRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C7</accession>
    <name>E3E7C7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flavoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">firD</name>
        <name evidence="3" type="ORF">PPSC2_24375</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the zinc metallo-hydrolase group 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373672.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11870"/>
    <dbReference type="EnsemblBacteria" id="ADO59138">
        <property type="protein sequence ID" value="ADO59138"/>
        <property type="gene ID" value="PPSC2_24375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5162"/>
    <dbReference type="eggNOG" id="COG0426">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017490_0_0_9"/>
    <dbReference type="OMA" id="EETMVTY"/>
    <dbReference type="OrthoDB" id="1149616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016440">
        <property type="entry name" value="Rubredoxin-O_OxRdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00258">
        <property type="entry name" value="Flavodoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005243">
        <property type="entry name" value="ROO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="2">
        <location>
            <begin position="251"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="46154" checksum="243E8CA22B385F5A" modified="2011-01-11" version="1">MKPGFKLAKDIYWVGKIDNREVPFHRLLLSKGTTYNAYLLKTGKPTIVDTVDMAFGREFAEAVAELIDPLDIQYIIVNHTEPDHSGGLAALASKAANATIVCTEIAVPEIQQMYKLQHRNFLVIKDGDQLDIGGKTLLFKETPYLHTEETMITYCIEDKILFPCDIFSTHVAVEHLFADEAGFDITEDFIGYYQAIIHPHRRYVRTLIEAVSDLDIEMIAPSHGFAIRHDIAKFIDLYASMSTETKDDKKVAIVYATLKNNTKKMANILRDCFLENQIKVELWDVDKADETEILNSITSADAVFVGSSTKYADMTGKLEDLLQKMQKMNLEGKLAAAFGSYGWSGEAIEVVQDYLNGTNMKVQSTSDVIKSTGMTHVEFPVRIRFSPTEVEKVKKIKNAAEFVSDLLLSVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7D5</accession>
    <name>E3E7D5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">bscR3</name>
        <name evidence="6" type="ORF">PPSC2_24415</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59146.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040102585.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11905"/>
    <dbReference type="EnsemblBacteria" id="ADO59146">
        <property type="protein sequence ID" value="ADO59146"/>
        <property type="gene ID" value="PPSC2_24415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5170"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_43_2_9"/>
    <dbReference type="OMA" id="IHETNQI"/>
    <dbReference type="OrthoDB" id="1570162at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025996">
        <property type="entry name" value="TetR_C_WHG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13305">
        <property type="entry name" value="TetR_C_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59146.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="200" mass="21969" checksum="BA8282F1F7979F06" modified="2015-05-27" version="2">MSPRNGVKLQDILEAAEDVANERGMGEVTLTTLAQKLHIRPPSLYNHVDGLNGLRQALALHSLEKLEEALMSAAVGRAGEEALIAMGRAYMQYARERPGLYEAMLYATDRNDTELRHAADRVAELVITVLSSGYGFNEADCIHAARGFRSLLHGFASLEQKGGFGLPVDVDQSIEVMMDTFCAGLRVLQQKREGEHSDKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R6</accession>
    <name>E3E7R6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA mismatch repair protein MutL</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 8" type="primary">mutL</name>
        <name evidence="8" type="ORF">PPSC2_13975</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the DNA mismatch repair MutL/HexB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371549.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01630"/>
    <dbReference type="EnsemblBacteria" id="ADO56949">
        <property type="protein sequence ID" value="ADO56949"/>
        <property type="gene ID" value="PPSC2_13975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2985"/>
    <dbReference type="eggNOG" id="COG0323">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004131_4_1_9"/>
    <dbReference type="OMA" id="AHERIMY"/>
    <dbReference type="OrthoDB" id="764332at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032300">
        <property type="term" value="C:mismatch repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00149">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014762">
        <property type="entry name" value="DNA_mismatch_repair_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020667">
        <property type="entry name" value="DNA_mismatch_repair_MutL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002099">
        <property type="entry name" value="DNA_mismatch_repair_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013507">
        <property type="entry name" value="DNA_mismatch_S5_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038973">
        <property type="entry name" value="MutL/Mlh/Pms"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014790">
        <property type="entry name" value="MutL_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042120">
        <property type="entry name" value="MutL_C_dimsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042121">
        <property type="entry name" value="MutL_C_regsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037198">
        <property type="entry name" value="MutL_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073">
        <property type="entry name" value="PTHR10073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01119">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08676">
        <property type="entry name" value="MutL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01340">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00853">
        <property type="entry name" value="MutL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118116">
        <property type="entry name" value="SSF118116"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00585">
        <property type="entry name" value="mutl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00058">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3 4" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_mis_repair" evidence="7">
        <location>
            <begin position="209"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="MutL_C" evidence="6">
        <location>
            <begin position="512"/>
            <end position="654"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="420"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="432"/>
            <end position="452"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="698" mass="77256" checksum="E11657554E28C42F" modified="2011-01-11" version="1">MSKIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDNGSGIEPEDVETAFYRHATSKIGHGRDLFQITSLGFRGEALPSIAAVSKVELLTAAGDDGRARKLVIEGGKLMLHENAAGRQGTDFTVRDLFYNTPARLKYMKTIQTELGHISDVLYRMALSHPEVAFTLRHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLMVEGESLDYRISGYVSRPEWTRSNRNAISTVVNGRFVRSYGLNQALLKAYHTLLPINRYPLAVIQLDMHPSLVDVNVHPAKLEVRFSKEAELFQLVEDSVKAVLGQQVLIPKAVKREIGGKDSGSFVQEQFHFSKGNSAKVDTSTDNISSNEESKKFSYEHEQLPNRGSHSVIGQANTLARQSISDDELDADFVEENNEGDVRGGVSLPDGTTTRISTGDHAETDVSSSYSEGIQETAASATYRPAVSPIADNTTKFTDQKPRQEHLNTEQLTALSGAAPEVPTFPELNLIGQHHGTYLIAQNDQGLYLIDQHAAHERVNYEFYYEKFGNPESVSQELLLPITLEFTPSETEKLKTRLHWFEQAGVYLEHFGGQTFRVSSYPYWLPKGEEADVIEEMAGWVLEEKAIDLAKLREAASIMCSCRASIKANQKLTDRQASVLLERLAACKQPYTCPHGRPIVVSFSTYDLEKLFKRVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7W9</accession>
    <name>E3E7W9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371601.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3041"/>
    <dbReference type="EnsemblBacteria" id="ADO57002">
        <property type="protein sequence ID" value="ADO57002"/>
        <property type="gene ID" value="PPSC2_14230"/>
    </dbReference>
    <dbReference type="GeneID" id="66577133"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3038"/>
    <dbReference type="eggNOG" id="ENOG503473Y">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2035721_0_0_9"/>
    <dbReference type="OMA" id="HIIITLE"/>
    <dbReference type="OrthoDB" id="1628303at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="13959" checksum="3D428404FACFC423" modified="2011-01-11" version="1">MLNTELEYRERIRKLAVCIVKHYRGKGPDNVKVSLNSPLRVTVEIQGTLSNLSEILVHEGAVEKVSDYWNVLRPYLEKEFMREAEKTLGSPFTYTWEVCPSVHGDGHIIITLELQHIPRLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y2</accession>
    <name>E3E7Y2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371614.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3055"/>
    <dbReference type="EnsemblBacteria" id="ADO57015">
        <property type="protein sequence ID" value="ADO57015"/>
        <property type="gene ID" value="PPSC2_14295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3052"/>
    <dbReference type="eggNOG" id="ENOG5032CEF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_643794_0_0_9"/>
    <dbReference type="OMA" id="NNRIIML"/>
    <dbReference type="OrthoDB" id="321565at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="6"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="426" mass="49749" checksum="E5FA3152291EDEA2" modified="2011-01-11" version="1">MLKERIEFLCKKKNLSRKELVDGLVTPAHFANILADRYPLAEDLAEQIAERLGVQPSYLLRASAEDEETLATADKIFTELSKLANPATESYVDQLEDRNDSLVVELTTYLMKAVYFQQLNDPTAYDYLHQTYLNFYLEKFGRSDEVELPVPLKKAILFYKIQYFRSKNHYYDVLNNVTQLIRLVEEGTENWLNAQNIMMEACIQVKQFDQAKQVFEQTMRRVYDDRLFHRLTGLYVAYSGYCFAMGSVQEALLTLSMAEANLVYLENAADMLTTILNNRIIMLTSIGELDKALEEVVRFEALVSREREEMQQMMLPVTLIYRCEIAFARKNWGLLSQHLDQLRKTNLTTDQQMGLDFYESQLALAQGKQDAFWKHAQQCLPYFEALQHPARLEQLYETLAVVSEDSRRYKESSAYYRKLVYLLRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Z3</accession>
    <name>E3E7Z3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ypfA</name>
        <name evidence="3" type="ORF">PPSC2_14730</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371702.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02365"/>
    <dbReference type="EnsemblBacteria" id="ADO57106">
        <property type="protein sequence ID" value="ADO57106"/>
        <property type="gene ID" value="PPSC2_14730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3143"/>
    <dbReference type="eggNOG" id="COG5581">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086342_2_0_9"/>
    <dbReference type="OMA" id="YCFERQL"/>
    <dbReference type="OrthoDB" id="1084216at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035438">
        <property type="term" value="F:cyclic-di-GMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009875">
        <property type="entry name" value="PilZ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009926">
        <property type="entry name" value="T3SS_YcgR_PilZN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07238">
        <property type="entry name" value="PilZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12945">
        <property type="entry name" value="YcgR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="T3SS_YcgR_PilZN" evidence="2">
        <location>
            <begin position="4"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="PilZ" evidence="1">
        <location>
            <begin position="102"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="25330" checksum="2CB2A979F0C0D4BB" modified="2011-01-11" version="1">MFPKINDVLYIQVAGTDQKEESFEYKSRIAEEDSQNFLIEIPMSQTSGHLKKLFLGEELSIFFMSEGGIKNYFNTHVTGFKDDVLRMVRIHKPAPDSISKIQRRNFLRVKANLEIAVKHGANESRFVAETHDVGGGGVSFQTQGSHHLEEGESLSCWVLVPYKNGTQEHVPFQSEIVRIQQMENDRKLIMLKYEKIADQERQKLIKYCFERQLEFRGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E882</accession>
    <name>E3E882_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Helicase_C_3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_15525</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371863.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03175"/>
    <dbReference type="EnsemblBacteria" id="ADO57274">
        <property type="protein sequence ID" value="ADO57274"/>
        <property type="gene ID" value="PPSC2_15525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3316"/>
    <dbReference type="eggNOG" id="ENOG50337BM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024795_0_0_9"/>
    <dbReference type="OMA" id="KEWRSYH"/>
    <dbReference type="OrthoDB" id="956280at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032830">
        <property type="entry name" value="XPB/Ssl2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13625">
        <property type="entry name" value="Helicase_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase_C_3" evidence="3">
        <location>
            <begin position="363"/>
            <end position="479"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="661" mass="74799" checksum="E48C06E71D5D3A89" modified="2011-01-11" version="1">MDVTSTQGNWNELLADELLVLRRCFVRYAAQPMKEEEPMQLTQGALSGVETKLALHGLRSRGWLEAVTKSWGERILYIPVDRLPALYDMLLEQTPMNGIHTDHPITVHEAMTGLESELLHVLSRIAIQGVPLTAKGTIHKRSLQKLNELTPFRPEDLEGLGLHYAHAELYPVQTVVMIDLLLSLGLLVKETVSFRIQEAELATWIRLSAGQMRKHIFDTLMERYGKAEAPMQHFRYMLCAVSQYGGTDEWISIQYLLQWMLQVGLIPQNSLSGDDSTNSAFIDIVPTIANLKGLEDETVSDFNFNGSFMEDIMGWLKALTAFGMGDWGQTTSGEICFRWNVSVTDLLRPYNDEDTHQEQGAFYVQPDFEILVPPDVAYDVRWRLECCCERVTGDRMVVYRITRESITEAIELGMEAKEIPALLDKYSRTGVPEHVRLAVEQWAGNVGRTAFVTVTLLRCGTQEDADMVARHPALEGLLERLGDKDFMIPVHSAEKIRKALAAIGLSPRLEPKNADEPAHHYPLLTEIENLDAGRSLFSQEGRAGLVYTGRTLHFYEQEHTLPDPSDYFPERSTVPSSWTKEWRSYHTSTSRQLMEQAIRWQAAVGLRISGKEVKWIPESVVSGDPWSVTGWYASGMDEETPSRATLQPSDWSDMRLLVPFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E895</accession>
    <name>E3E895_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydeE3</name>
        <name evidence="3" type="ORF">PPSC2_15590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371874.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03240"/>
    <dbReference type="EnsemblBacteria" id="ADO57287">
        <property type="protein sequence ID" value="ADO57287"/>
        <property type="gene ID" value="PPSC2_15590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3329"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3708">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_81_1_9"/>
    <dbReference type="OMA" id="FSAFHFQ"/>
    <dbReference type="OrthoDB" id="1748122at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010499">
        <property type="entry name" value="AraC_E-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029441">
        <property type="entry name" value="Cass2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14526">
        <property type="entry name" value="Cass2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00871">
        <property type="entry name" value="AraC_E_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="33402" checksum="9D008186E333DD64" modified="2011-01-11" version="1">MDYFKRIQCAIEFIELNLREDLKIAEVASQAYFSAFHFQRVFQAISGFTVQQYIRRRRLSEAAKRLKQSNQKVLDIAIEYQYNSQEAFTRAFEKSFGITPGKYRNCDIELSGQSKINFLDYQKNATEELEVNKPVILQLETTKIVGYEYKTNLNNEQHYKEIPGFYEHFGAHEYFMCIPNKIAPGMSYGIACRFEDNGAFSFVVGEEVEKESKELAEGFINMEIPAGKYAEFDASGSNGRVQNIRDFIYGTWLPNSNFERREGPDFEITDVMNSSPDHLNMKVYIPIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8A2</accession>
    <name>E3E8A2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 6">Catabolite control protein A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ccpA3</name>
        <name evidence="8" type="ORF">PPSC2_15620</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Global transcriptional regulator of carbon catabolite repression (CCR) and carbon catabolite activation (CCA), which ensures optimal energy usage under diverse conditions.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371881.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03270"/>
    <dbReference type="EnsemblBacteria" id="ADO57294">
        <property type="protein sequence ID" value="ADO57294"/>
        <property type="gene ID" value="PPSC2_15620"/>
    </dbReference>
    <dbReference type="GeneID" id="66576856"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3335"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_0_9"/>
    <dbReference type="OMA" id="HSEFVFM"/>
    <dbReference type="OrthoDB" id="664909at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006377">
        <property type="entry name" value="CcpA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01481">
        <property type="entry name" value="ccpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0010">Activator</keyword>
    <keyword evidence="4 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0678">Repressor</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="7">
        <location>
            <begin position="3"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00019435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="37078" checksum="5A4762C9EA14DCED" modified="2011-01-11" version="1">MTVTIYDVAREAGVSMATVSRVVNNNPNVKPQTRKKVYEAIEQLGYRPNAVARGLASKKTTTVGVVIPDISNSIFAEIARGIEDIANMYHYNIILCNADKRKEKEIRVINTLLEKQVDGLLFMGGTVTDEHIQAFHTAAVPIVLCATSDEKGSYPSVDIDHEAAAFDAVNTLIRHGHRQIAMISGTLQDPANGYARFQGYKRALETAGIDYQEDLVRIGNYRYESGVEAMKYFLGLKKKPSAIFAATDEMAIGAIHSIQDEGLKVPDDFSVISVDNIRMASMVRPQLTTVAQPMYDLGAVAMRLLTKLMKKENVENSRVILPHETILRLSVNYLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8A9</accession>
    <name>E3E8A9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">3-phosphoshikimate 1-carboxyvinyltransferase</fullName>
            <ecNumber evidence="7">2.5.1.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">5-enolpyruvylshikimate-3-phosphate synthase</fullName>
            <shortName evidence="7">EPSP synthase</shortName>
            <shortName evidence="7">EPSPS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">aroA</name>
        <name evidence="9" type="synonym">aroA3</name>
        <name evidence="9" type="ORF">PPSC2_15655</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3-phosphoshikimate + phosphoenolpyruvate = 5-O-(1-carboxyvinyl)-3-phosphoshikimate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21256"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57701"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
            <dbReference type="EC" id="2.5.1.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 6/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the EPSP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.19" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371888.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03305"/>
    <dbReference type="EnsemblBacteria" id="ADO57301">
        <property type="protein sequence ID" value="ADO57301"/>
        <property type="gene ID" value="PPSC2_15655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3342"/>
    <dbReference type="eggNOG" id="COG0128">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024321_0_0_9"/>
    <dbReference type="OMA" id="CPDIIPV"/>
    <dbReference type="OrthoDB" id="533829at2"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00089"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003866">
        <property type="term" value="F:3-phosphoshikimate 1-carboxyvinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01556">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00210">
        <property type="entry name" value="EPSP_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001986">
        <property type="entry name" value="Enolpyruvate_Tfrase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006264">
        <property type="entry name" value="EPSP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023193">
        <property type="entry name" value="EPSP_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00275">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000505">
        <property type="entry name" value="EPSPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="SSF55205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01356">
        <property type="entry name" value="aroA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00104">
        <property type="entry name" value="EPSP_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EPSP_synthase" evidence="8">
        <location>
            <begin position="7"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoenolpyruvate" evidence="7">
        <location>
            <begin position="89"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate-3-phosphate binding" evidence="7">
        <location>
            <begin position="164"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
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        </location>
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        </location>
    </feature>
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        <location>
            <position position="26"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
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        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
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        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="332"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="336"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
    </feature>
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        <location>
            <position position="340"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="384"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
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        <location>
            <position position="410"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004811"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00009948"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="430" mass="46879" checksum="0275C0833D795FFC" modified="2011-01-11" version="1">MDVIVRPTPSLQGEIGALSSKNYTTRYLLTAALADGQSTIYYPAHSEDSDAMRRCITDLGAVLEEDDEKIVITGFGSHPQAVKELNVGNAGAVLRFLMGIASLCPDVTFVNTYPDSLGKRPHDDLIDALGQLGVKVDHREGKLPIRIQGGQAKGGKIEVSGSVSSQYLSALLFLTPLLEEDSEIEVLHDLKSKVVIGQTLEVLQEAGITIHASDDYMSFRVPGRQSYQPRTYTVQGDYPGSAAVLAAAAVTNSDVTIHRLKEQSKQGERAIVDVLRMMEVPLTHENDTVVVKGNGRLKAIEFDGDAATDAVLAMVAAAVFAEGTSRFYNVENLRYKECDRITDYLNELSKAGARVEERQAEIIVHGRPEGVEGGVEINAHYDHRVIMALTVVGLRAQKPLVIKDAHHVAKSYPQYFDHLTTLGASVEWVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8F6</accession>
    <name>E3E8F6_PAEPS</name>
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        <submittedName>
            <fullName evidence="8">Stage V sporulation protein E</fullName>
        </submittedName>
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    <gene>
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        <name evidence="8" type="ORF">PPSC2_16610</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
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            <topology evidence="1">Multi-pass membrane protein</topology>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.3545"/>
    <dbReference type="eggNOG" id="COG0772">
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    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="project" value="InterPro"/>
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        <property type="term" value="P:peptidoglycan biosynthetic process"/>
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        <property type="entry name" value="FtsW/RodA"/>
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        <property type="entry name" value="RodA/MrdB"/>
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        <property type="entry name" value="SpoVE"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
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    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
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            <begin position="12"/>
            <end position="36"/>
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            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="365" mass="39123" checksum="7466D923ED5F10E2" modified="2011-01-11" version="1">MKQSRPAPDIWLFVCIVSLLAIGMVMVYSAGAVLAFHEYGDSYYFVKRQLLFAGLGLVAMYFTARTDYRIWQKYAKVVLLICLALLVAVLIPGIGVVRGGARSWLGISSFGIQPSEFMKLGMILFLSQWLSRPDYDISSFTRGLLPPLGLMGLAFGLIMLQPDLGTGTVMMGASMLIVFTAGARMKHLGLLALSGAAGFAALIAAAPYRLQRITAFLDPWSDPLGAGYQIIQSLYAIGPGGLAGLGLGMSRQKYSYVPEPQTDFIFSILAEELGFIGGMTVLGLFLVLVWRGMRVAITIPDTYGSLLAVGIVGMVAVQVVINIGVVIGLMPVTGITLPLISYGGSSLTLMLTALGILLNLSRYAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8H2</accession>
    <name>E3E8H2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04025"/>
    <dbReference type="EnsemblBacteria" id="ADO57521">
        <property type="protein sequence ID" value="ADO57521"/>
        <property type="gene ID" value="PPSC2_16690"/>
    </dbReference>
    <dbReference type="GeneID" id="66576708"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3561"/>
    <dbReference type="eggNOG" id="ENOG5033HF9">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_155053_1_0_9"/>
    <dbReference type="OMA" id="VAMIMMF"/>
    <dbReference type="OrthoDB" id="2025243at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024515">
        <property type="entry name" value="DUF3397"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11877">
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14636" checksum="D1121318493E036F" modified="2011-01-11" version="1">MSLIQGTIITFSILPFFPFLIVFAVCRYILKMEKKKSLLTSMDITTFFLIFSVAALFNVLFTSRFGFYLILLLLLLALGLIGGAQNRIKGKVDGKRLCRAVWRLTFMAMTLAYTLLTVVGIFKNIFNSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8H4</accession>
    <name>E3E8H4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Precorrin-3B C17-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rsfA</name>
        <name evidence="2" type="ORF">PPSC2_16700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372107.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04035"/>
    <dbReference type="EnsemblBacteria" id="ADO57523">
        <property type="protein sequence ID" value="ADO57523"/>
        <property type="gene ID" value="PPSC2_16700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3563"/>
    <dbReference type="eggNOG" id="ENOG50305IT">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_095991_0_0_9"/>
    <dbReference type="OMA" id="NTAQEWA"/>
    <dbReference type="OrthoDB" id="1773653at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014243">
        <property type="entry name" value="DNA_bind_RsfA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41302">
        <property type="entry name" value="PTHR41302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02894">
        <property type="entry name" value="DNA_bind_RsfA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="121"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24830" checksum="B459FBBB7CDD498A" modified="2011-01-11" version="1">MTAIRQDAWSAEDDLILAEVTLRHIREGGTQLAAFEEVGQKIGRTSAACGFRWNSCVRKRYDEAIGIAKAQRQKRSYIRKQSPVGVSQVAAFATLDPVEGGYRTDGTSEDTLSIDAVIRFLRQWKGSMQETNRQIKMLEKDLREKEEELNQLRSINDRLSKEVNDVQTDYRVVNDDYKALIQIMDRARRLALITEDEEELKSRFKMDANGNLERIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8V7</accession>
    <name>E3E8V7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yhbO</name>
        <name evidence="3" type="ORF">PPSC2_19130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C56 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372630.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06330"/>
    <dbReference type="MEROPS" id="C56.001"/>
    <dbReference type="EnsemblBacteria" id="ADO58055">
        <property type="protein sequence ID" value="ADO58055"/>
        <property type="gene ID" value="PPSC2_19130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4098"/>
    <dbReference type="eggNOG" id="COG0693">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_44_4_9"/>
    <dbReference type="OMA" id="YAWMREF"/>
    <dbReference type="OrthoDB" id="1421548at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006286">
        <property type="entry name" value="C56_PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42733">
        <property type="entry name" value="PTHR42733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01382">
        <property type="entry name" value="PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51276">
        <property type="entry name" value="PEPTIDASE_C56_PFPI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="2">
        <location>
            <begin position="3"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="18275" checksum="BE895F65A2C0EB57" modified="2011-01-11" version="1">MSKIAFLLADQFEDSEMKVPYDELKKAGHEADIIGLKQGEKVNGKQGKASYTIEKAIADVKSSDYDAVVIPGGSSPENLRLDANVLKFVTEMNESKKTIGAICHGPQILASADLLQGRTITAYPPLKDDLINAGAHFEDREAVVDGNFITSRTPKDEPAFVRELLKAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E947</accession>
    <name>E3E947_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore gernimation protein GerQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yraF</name>
        <name evidence="3" type="ORF">PPSC2_24885</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Spore coat</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CotF family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59254.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886153.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12375"/>
    <dbReference type="EnsemblBacteria" id="ADO59254">
        <property type="protein sequence ID" value="ADO59254"/>
        <property type="gene ID" value="PPSC2_24885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5274"/>
    <dbReference type="eggNOG" id="COG5577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_163858_0_0_9"/>
    <dbReference type="OrthoDB" id="1836179at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012851">
        <property type="entry name" value="Spore_coat_CotF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39183">
        <property type="entry name" value="PTHR39183"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07875">
        <property type="entry name" value="Coat_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00024344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59254.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="14498" checksum="9E2BF591E7F2C052" modified="2015-05-27" version="2">MDYVDPKNSLNMPEMADTTLAMDFLVRVKEGVRNTAIALTETVSTDARTLLRNQLHQGIALHQEITDLMVRKKWFHPYDLQKQYQLDQLSANKTVDISKMKLFPDDTTRKGMFDRTPDEHMGGNQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E998</accession>
    <name>E3E998_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_15975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371957.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3414"/>
    <dbReference type="EnsemblBacteria" id="ADO57371">
        <property type="protein sequence ID" value="ADO57371"/>
        <property type="gene ID" value="PPSC2_15975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3413"/>
    <dbReference type="eggNOG" id="ENOG50306H0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_207905_0_0_9"/>
    <dbReference type="OMA" id="NEDNRPF"/>
    <dbReference type="OrthoDB" id="2079664at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="6627" checksum="CA570FD37E9C59C8" modified="2011-01-11" version="1">MNEEHRPFSSPVDAEGTKANFDANQRKLHSEGASSLWRQVSNLLILVGVIALIIIIGRLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9S2</accession>
    <name>E3E9S2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adhesin HecA 20-residue repeat X2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57862.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05600"/>
    <dbReference type="EnsemblBacteria" id="ADO57862">
        <property type="protein sequence ID" value="ADO57862"/>
        <property type="gene ID" value="PPSC2_18260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3905"/>
    <dbReference type="eggNOG" id="COG3501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_293703_0_0_9"/>
    <dbReference type="OrthoDB" id="1880900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="839"/>
            <end position="872"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="842"/>
            <end position="872"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57862.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="872" mass="97032" checksum="CB96713032799EBA" modified="2015-05-27" version="2">MSVLSDGIGYESLRFYGPFQPLHIEQLQITRTINDHAYLHISGMLSEEQGVACIGQNMDQEPIVIRQLNDQGQSLRRLFHGIVTRMSVHCVRGLYTFELEAASHSYQMDIKVKKRSYQDIHRTYDDLVTALVRKYQYGDAIDTVSNHAKLETFVLQYEETDWAFLKRLASRFGSVLVPEVTAASPKVFFGMPEGKQHKVERDVFYRVRKTFHELDAEKPGERAGSYFTYMIESLQYYALGDLITLPIGQGKELAVVRAVTTLIDGLLRTRYNLQSEQDIRYARYENNQATGVSLTGTVLKVQQDFVQLQLDIDPKQDPAKACWFPIATRYVAEEHSGWYDMPEIGEQVELYLPTHREQDAYVTDSLRQQRHANGQPNVKVWQHVQGSSVEMSEHELTLSTSGEFSITLHESSGITIDSPGNVQIQGGHVKLDARQELSLEAGTALYLKGGASSMVLDGETDTKAPVIYQEGTVKAPVFVADLPPVPEPPLMSIKAYEAAQSAAKDSSSSQASTPKAKVTSPAELKQANALMGTVSKLLGSIPVMGKVAGVVAGALSGPAGGVILGATAMIPVRSKGTNHAVGSAPKGGLHPLKHLASLALQGLISQYEHERAKEAYYSKWILGKVYTSARHIALSGGPLELVQNLLKESNAMAHAYQQVPKNIQEKWLRDNEEKQRIQAAQTQKHENSRLALWRERKTSEYTSYWNQTDYFTANWWQDENKLKQAEQALRTEITMKRKLSLYDIKDPNKLAAIQRIVNAKRTHVWDEGTLNAIEDGLLAMGVDSTNAIELDKEKMDALISRYNQGFIGQKSGDYMERTGLSDLVEDTTYGIVTARIGMGSAGSSPARSSQPPCRKSACKTQSKGWSRCKQAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9U1</accession>
    <name>E3E9U1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DeoR faimly transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yobV9</name>
        <name evidence="3" type="ORF">PPSC2_18350</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372460.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05650"/>
    <dbReference type="EnsemblBacteria" id="ADO57881">
        <property type="protein sequence ID" value="ADO57881"/>
        <property type="gene ID" value="PPSC2_18350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3926"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041141_4_4_9"/>
    <dbReference type="OMA" id="INIRTVY"/>
    <dbReference type="OrthoDB" id="1654295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_11" evidence="1">
        <location>
            <begin position="8"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="WYL" evidence="2">
        <location>
            <begin position="138"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="320" mass="36780" checksum="73C83025B12CA454" modified="2011-01-11" version="1">MPKNDNMLAILWMLNSGVKMTAKQISEKLEINIRTVYRYIDALCASGVPIISDTGHHGGYRLLNNFIRAPLLFDMEEKKALLHAAVFAKEAGYPLSEALSNATSKLKKYSNQEQESILSRHLAGFEVINRMGDPSLQPILAELEQAVANEFSVEMDYRTSHEEQPKNRVIDPYGMVYWNNKWYTVAFCHLRNEIRSFRADRILQIKRTPSLFKRPEAFSAREFFMQNLLPDLVGKDGLISLMIEGKSEALDDLCLHWFLGHHLKERTANQAIFLLEEKSLHTYVPYLLLPYGKSIQVIEPQSLKEKLVAVASELVEYYQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z4</accession>
    <name>E3E9Z4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Beta-glucosidase</fullName>
            <ecNumber evidence="3 11">3.2.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">bglA7</name>
        <name evidence="12" type="ORF">PPSC2_19545</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.</text>
            <dbReference type="EC" id="3.2.1.21"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.21" evidence="3 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372699.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06750"/>
    <dbReference type="CAZy" id="GH1">
        <property type="family name" value="Glycoside Hydrolase Family 1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58127">
        <property type="protein sequence ID" value="ADO58127"/>
        <property type="gene ID" value="PPSC2_19545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4167"/>
    <dbReference type="eggNOG" id="COG2723">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001859_1_3_9"/>
    <dbReference type="OMA" id="PWCASIL"/>
    <dbReference type="OrthoDB" id="654705at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102483">
        <property type="term" value="F:scopolin beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018120">
        <property type="entry name" value="Glyco_hydro_1_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017736">
        <property type="entry name" value="Glyco_hydro_1_beta-glucosidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033132">
        <property type="entry name" value="Glyco_hydro_1_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="PTHR10353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03356">
        <property type="entry name" value="BGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00572">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00653">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="6 11" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="409"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8 10">
        <location>
            <position position="356"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="22"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="166"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="298"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="402"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR617736-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR617736-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="448" mass="51749" checksum="EB8E01EB38795B1D" modified="2011-01-11" version="1">MSENIFVFPDTFMWGTSTSSYQIEGGTNEGGRTPSIWDTFCQIPGKVIEGDCGDVACDHFHRFKEDVQLMKQLGFLHYRFSVAWPRIMPAPGVVNEQGLLFYEHLLDELESAGLIPMLTLYHWDLPQWIEDEGGWTQREIIQHFKTYASVIMDRFGQRINWWNTINEPYCASILGYGTGEHAPGHENWSEAFTAAHHILMCHGIAINLHKEKGLTGKIGITLNMEHVDAASERPEDIAAAARRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDLELIQQPGDFVGINYYTRSIIRATNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSKGLPILITENGAAMKDELVNGQIEDTGRQRYIEEHLKACHRFIREGGQLKGYFVWSFFDNFEWAWGYSKRFGIVHINYETQERTPKQSALWFKQMMEKNGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z7</accession>
    <name>E3E9Z7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycerol transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glpF</name>
        <name evidence="8" type="ORF">PPSC2_19560</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the MIP/aquaporin (TC 1.A.8) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372702.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06780"/>
    <dbReference type="EnsemblBacteria" id="ADO58130">
        <property type="protein sequence ID" value="ADO58130"/>
        <property type="gene ID" value="PPSC2_19560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4170"/>
    <dbReference type="eggNOG" id="COG0580">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020019_9_2_9"/>
    <dbReference type="OMA" id="FTSHHYY"/>
    <dbReference type="OrthoDB" id="1744995at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015267">
        <property type="term" value="F:channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023271">
        <property type="entry name" value="Aquaporin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000425">
        <property type="entry name" value="MIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022357">
        <property type="entry name" value="MIP_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00230">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00783">
        <property type="entry name" value="MINTRINSICP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81338">
        <property type="entry name" value="SSF81338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00861">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00221">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="34"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="163"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="241"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="28992" checksum="2E26CA96D2FAA6C0" modified="2011-01-11" version="1">MSPYAAEFIGTMILIALGGGVCAGVSLKKSFAHASGWIVIGMGWGLAVAIAVYAVGQISGAHLNPAVTLALAFQGSFPWQDVPGYIVAQLFGAMAGAVIVILHYWPHWKETEDAATKLSVFATGPAIDHPFANVLSEMIGTFIFVLALLSFGANSFTDGLKPLIVGFLIVSIGLSLGGTTGYAINPVRDFGPRLMHYLLPIPGKGASNWGYAWVPIVGPLLGGSFAGPFYQAVFKGSVTPAFWILLGVIAVVLLITFRISRTYKNHKMNHKLTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA81</accession>
    <name>E3EA81_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylbJ3</name>
        <name evidence="2" type="ORF">PPSC2_20655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372942.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07900"/>
    <dbReference type="EnsemblBacteria" id="ADO58373">
        <property type="protein sequence ID" value="ADO58373"/>
        <property type="gene ID" value="PPSC2_20655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4406"/>
    <dbReference type="eggNOG" id="COG3314">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051469_1_0_9"/>
    <dbReference type="OMA" id="LEPFMRP"/>
    <dbReference type="OrthoDB" id="819609at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014226">
        <property type="entry name" value="Spore_IM_YlbJ"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02871">
        <property type="entry name" value="spore_ylbJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="122"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="241"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="349"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="389"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="432" mass="46423" checksum="D0951D04DA461C32" modified="2011-01-11" version="1">MSLYRRFSLPLLILMLLFLFILMAAYPQSSLNAGLRGLAIWWDVLFPSLFPFFVISELLLGFGIVHFIGALLDPLMQPLFRVPGCGGFVAAVSCASGYPIGAKLTAKLWEQKWITRIEGERLVAFTTSSDPIFLIGAVSVGFFHQPEIALVLGAAHYGGVLIIGLLMRFHGSRSEKNDIRSDRSQLPQKTWSKSANTITTGRNKQPGPLRQALYAMHTARLEDGRPLGELLRQAIASSLRLIIVVGGLVVFFCVILEALTNSGLMSGLHLLTASLLSACGLPPALTESIVGGIFEVTLGAQAAGGAAAAALPFKVAAAAFVLSWGGLSVHAQVASILNMTNLRYMPFLLARAAHGIISALLALVLWRPLMGQGSSPVFSPVHDIAWSPGFSSAMLLQSLLLLACILTGMLALSWLSVGTNRLFVRLRGIHRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAI2</accession>
    <name>E3EAI2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Sulfate transport system permease protein CysT</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cysT5</name>
        <name evidence="11" type="ORF">PPSC2_21810</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.</text>
    </comment>
    <comment type="function">
        <text evidence="8">Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373167.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08945"/>
    <dbReference type="EnsemblBacteria" id="ADO58600">
        <property type="protein sequence ID" value="ADO58600"/>
        <property type="gene ID" value="PPSC2_21810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4640"/>
    <dbReference type="eggNOG" id="COG0555">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_14_0_9"/>
    <dbReference type="OMA" id="VFISGNM"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015419">
        <property type="term" value="F:ABC-type sulfate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011865">
        <property type="entry name" value="CysT_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005667">
        <property type="entry name" value="Sulph_transpt2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406">
        <property type="entry name" value="PTHR30406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406:SF8">
        <property type="entry name" value="PTHR30406:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00969">
        <property type="entry name" value="3a0106s02"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02139">
        <property type="entry name" value="permease_CysT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0764">Sulfate transport</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="64"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="139"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="190"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="244"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="62"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="30390" checksum="79D0089E689EA43E" modified="2011-01-11" version="1">MSQMQATRKRVLPGFGLTMGYSVLYLSLVVLVPLSALLLNSTGLTWEKFWDVATDVRVLASYKVSFLCAAAAALIDLFLGLLIAWVLVRYEFPGKRVFDAVIDLPFALPTAVAGVALTALYAQNGWIGSLFEPLGWKMAYSQTGITLALMFIGIPFVVRTVQPVLEELDKDEEEVAATLGAGRWRTFRSVIVPELVPPLLTGFALAFARGIGEYGSVVFISGNMPMKTEIAPLLIMSKLEQNDYAGATAVALMLLVISFVLLFVINSFQRWSRRRAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAJ0</accession>
    <name>E3EAJ0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase</fullName>
            <ecNumber evidence="7">2.7.7.60</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">4-diphosphocytidyl-2C-methyl-D-erythritol synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">MEP cytidylyltransferase</fullName>
            <shortName evidence="7">MCT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">ispD</name>
        <name evidence="8" type="ORF">PPSC2_22555</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>2-C-methyl-D-erythritol 4-phosphate + CTP + H(+) = 4-CDP-2-C-methyl-D-erythritol + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:13429"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:57823"/>
            <dbReference type="ChEBI" id="CHEBI:58262"/>
            <dbReference type="EC" id="2.7.7.60"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 2/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.60" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373287.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10020"/>
    <dbReference type="EnsemblBacteria" id="ADO58748">
        <property type="protein sequence ID" value="ADO58748"/>
        <property type="gene ID" value="PPSC2_22555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4781"/>
    <dbReference type="eggNOG" id="COG1211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061281_2_2_9"/>
    <dbReference type="OMA" id="ERQHSVY"/>
    <dbReference type="OrthoDB" id="1836139at2"/>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00093"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050518">
        <property type="term" value="F:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02516">
        <property type="entry name" value="CDP-ME_synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00108">
        <property type="entry name" value="IspD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001228">
        <property type="entry name" value="IspD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034683">
        <property type="entry name" value="IspD/TarI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018294">
        <property type="entry name" value="ISPD_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01128">
        <property type="entry name" value="IspD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00453">
        <property type="entry name" value="ispD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01295">
        <property type="entry name" value="ISPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="5 7 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 8" id="KW-0808">Transferase</keyword>
    <feature type="site" description="Transition state stabilizer" evidence="7">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="7">
        <location>
            <position position="24"/>
        </location>
    </feature>
    <feature type="site" description="Positions MEP for the nucleophilic attack" evidence="7">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <feature type="site" description="Positions MEP for the nucleophilic attack" evidence="7">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="25887" checksum="16C4568F55517E53" modified="2011-01-11" version="1">MNNQVGVVIVAAGRGSRMGTQESKQFLLLRDKPIFIHTLEIFAAMPEVDEMVMVTGAGDVERCRDWVHQYKISKNVRVVAGGSERQHSVYRGLRHLQTDWVMVHDGVRPLIQPELVRSCLEAAQRTGASVAAVPVKDTIKQVNGDGIITATPDRRSLWSIQTPQTFRLSDLLRAYEEAEQSGFLGTDDSMLVERLGIPVTVVQGSYKNIKITTPEDLEMAELWVKTEGEDIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAQ8</accession>
    <name>E3EAQ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ara4FN</name>
        <name evidence="3" type="ORF">PPSC2_22885</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373354.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10360"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58816">
        <property type="protein sequence ID" value="ADO58816"/>
        <property type="gene ID" value="PPSC2_22885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4846"/>
    <dbReference type="eggNOG" id="COG1215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033536_0_1_9"/>
    <dbReference type="OMA" id="FRGMTAW"/>
    <dbReference type="OrthoDB" id="1064289at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="233"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="265"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="9"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="37652" checksum="7F5D0D4815BB041E" modified="2011-01-11" version="1">METKNPFLSVVIPMYNEGSHLERSLKVIDGVLSVVTSRYELIIVDDGSKDDTWLKLSELSRRMPSLLALRLSRNFGKELALCAGLENASGDAIIVMDGDLQHPPEMIGEMVRLWQNEGYDLVECVKEFRGEESVGKKLGASLFYATLNRLTGFNLKDASDYKLLDRRVVDAWMAMPERMPFFRGMTAWLGFRKTQITFRVAPREEGPSRWSPLGLLRLAAEAIVSFSTVPLRVVSLMGLIFMLISVVLGIQTLMHKITGDAVTGFTTVILLLLIIGSVLMLSIGVVGEYIAAIYHEVKARPRYLIADKRANADRLWVDREFNQHDQTFVSKVSNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAW1</accession>
    <name>E3EAW1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">abrB11</name>
        <name evidence="3" type="ORF">PPSC2_23865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373561.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11370"/>
    <dbReference type="EnsemblBacteria" id="ADO59024">
        <property type="protein sequence ID" value="ADO59024"/>
        <property type="gene ID" value="PPSC2_23865"/>
    </dbReference>
    <dbReference type="GeneID" id="66575299"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5049"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117609_0_0_9"/>
    <dbReference type="OMA" id="GLMIRKY"/>
    <dbReference type="OrthoDB" id="1942483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="2">
        <location>
            <begin position="8"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16725" checksum="8FE944378DD04BDC" modified="2011-01-11" version="1">MKNTGMTRPLDHLGRIVLPKELRTSMNINIGDALDFFITPEGLMIRKYTGVSCYFCGAVDHLSYFRDHLICKSCIENLKSDNPSSHLSEARPVQPKKRRSYRNQNELLNKLKQLMEEYPNVSQKELAEMLELSQGRVSQLKKLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB01</accession>
    <name>E3EB01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NmrA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373814.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12495"/>
    <dbReference type="EnsemblBacteria" id="ADO59281">
        <property type="protein sequence ID" value="ADO59281"/>
        <property type="gene ID" value="PPSC2_25000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5298"/>
    <dbReference type="eggNOG" id="COG0702">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_10_4_9"/>
    <dbReference type="OMA" id="NGWYHEN"/>
    <dbReference type="OrthoDB" id="1616572at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="7"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="30532" checksum="06E0215F0436ED3C" modified="2011-01-11" version="1">MKIALTGATGQLGSIVVDTLLASVPAKDLIVSVRNPEKAEGLRNRGVDVRHGDFDKPETLDQAFAGVDRLLIISADGDNDTRIRQHKAAVDAAVRAGVGFIAYTSAANAADSTLFLAPVHRITEEFIRESGIPYSFLRNNWYLENEAGTIQSVLAGAPWLTSAGSGRVGWAARADYAQAAAAVLSGEGHENTIYELSGKPITQEELAAILAEVLGKDVPVQQVDDAAYAEIMLGAGVPEGAIPIVVGIQQAIREGALDVVSNDFEKLLKRPLTPLKQGISELVKQIQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBC7</accession>
    <name>E3EBC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_21150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373028.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08380"/>
    <dbReference type="EnsemblBacteria" id="ADO58459">
        <property type="protein sequence ID" value="ADO58459"/>
        <property type="gene ID" value="PPSC2_21150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4496"/>
    <dbReference type="eggNOG" id="ENOG503388M">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2260951_0_0_9"/>
    <dbReference type="OMA" id="IRRACSK"/>
    <dbReference type="OrthoDB" id="1874644at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="12358" checksum="C1D2B1A8D34FEF73" modified="2011-01-11" version="1">MPPGKFPKHDNPQSRLPTARGIRRACSKELYRTCKRLPVHIAPDLVKQGEELYCRKVVGHLIWIAENHSNRKLLCDWWDEDVSEELAALWKVDRDVLCTAFRSAYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF9</accession>
    <name>E3EBF9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yojK</name>
        <name evidence="1" type="ORF">PPSC2_21975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373199.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09125"/>
    <dbReference type="CAZy" id="GT1">
        <property type="family name" value="Glycosyltransferase Family 1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58633">
        <property type="protein sequence ID" value="ADO58633"/>
        <property type="gene ID" value="PPSC2_21975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4674"/>
    <dbReference type="eggNOG" id="COG1819">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000537_7_1_9"/>
    <dbReference type="OMA" id="MFSIAAH"/>
    <dbReference type="OrthoDB" id="1485440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008194">
        <property type="term" value="F:UDP-glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006326">
        <property type="entry name" value="UDPGT_MGT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01426">
        <property type="entry name" value="MGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="405" mass="45667" checksum="0E004BD7EAAA54DF" modified="2011-01-11" version="1">MARVLVMITPAEGHVNPSLGLVKQLVDRGKEVDYVCSEEFGTRIQQTGANLITYPFSTDAFIHNPVLKPAEYKHHYQFVNMIVKGLIEPIIPKVMKEIENKEYDYLIYDYLMGWGGKIIAERLGIPAVCTICSFAFVEPLGSDQGWDDDDIKVRELYDDTMKVVHQLAEEFQVSVPAIDELDSHSHSLKVVYTSRYFQPQAEKLDDSYIFAGPSIVPRKDAPSFPFEQLRALYPQVVYISLGTILNRDLEFYKLCFEAFRDLPVQFVLSSGQYAEMELLADNIPDNFMIKPYIPQLEMLQRVDAFITHGGMNSASEALYYNVPMVLVPMTSDQPIVANRVQELGAGIAVNKNELTPAILKAALVEVLNQAIYKQQAHVIGQSLRQAGGYTYAADAIMSRFSTIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM6</accession>
    <name>E3EBM6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucose-1-phosphate cytidylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rfbF</name>
        <name evidence="2" type="ORF">PPSC2_23015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373382.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4904"/>
    <dbReference type="EnsemblBacteria" id="ADO58844">
        <property type="protein sequence ID" value="ADO58844"/>
        <property type="gene ID" value="PPSC2_23015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4875"/>
    <dbReference type="eggNOG" id="COG1208">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029499_10_0_9"/>
    <dbReference type="OMA" id="YWRAIDT"/>
    <dbReference type="OrthoDB" id="1557977at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047343">
        <property type="term" value="F:glucose-1-phosphate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02524">
        <property type="entry name" value="G1P_cytidylyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013446">
        <property type="entry name" value="G1P_cyt_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47183:SF1">
        <property type="entry name" value="PTHR47183:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02623">
        <property type="entry name" value="G1P_cyt_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="257" mass="29371" checksum="75C1F871A0918E10" modified="2011-01-11" version="1">MKAVILAGGYGTRISEETHLKPKPMIEIGGHPILWHIMKIYSYYGINDFVICLGYKGYLIKEYFANYYLHMSDVTFDMRGNNMEIHNNNSEPWRVTLVDTGLETMTGGRLKRIQKYIGNETFCFTYGDGVSNVNITELINFHRRSGTQATLTGVQPPGRFGALDILENRITSFEEKPQGDGSWINGGYFVLEPEVFSLIKDDSVIWEAGPLEKLAQGNQLSAFKHPGFWQPMDTLRDKVKLEEMWGKKEAPWKVWDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ8</accession>
    <name>E3EBQ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Amylopullulanase alpha-amylase/pullulanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">amyB5</name>
        <name evidence="3" type="ORF">PPSC2_23160</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373414.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10645"/>
    <dbReference type="EnsemblBacteria" id="ADO58876">
        <property type="protein sequence ID" value="ADO58876"/>
        <property type="gene ID" value="PPSC2_23160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4905"/>
    <dbReference type="eggNOG" id="COG1984">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002873_0_0_9"/>
    <dbReference type="OMA" id="VVDRHEF"/>
    <dbReference type="OrthoDB" id="48249at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168124" evidence="1">
        <location>
            <begin position="29"/>
            <end position="1337"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="1129"/>
            <end position="1193"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="1198"/>
            <end position="1261"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="1267"/>
            <end position="1337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1337" mass="145586" checksum="6965CFF51FEE474E" modified="2011-01-11" version="1">MKRLLSMLLTVGLIIGLVPAALVGTAHAATGTYFIFPNEKYDADSARMVNTDRVTVNGTINGVNGSTISYSVFQLSKNGTNLNVVNKNESQKGGITVNGSTIQISDIKLFPGLNRITFQSSQNSAEMKDSIYIEYQDGPKLYDLSATLNGETQQLVENQTAVLTDARNSGTDDVKVVIQGTAPNADSVTLTSTKSSNSYNVSSYSSYKLTGSVVLTPGKNIVTIKVNNGTQALTVTREITIYTGKPEFSDLTLNKDGNVSADLTTSPDFTVSSTSGVVLKGNVLVPSGATDPVVSKINARFTDVSNNGSAIGDTNGIDATIDTANVVTSTGYKLYPFQVTVPDGIVTDHLIRASLSVGFANGTSSNASAVQFTLRSSTQPYIDDVNFLPDFNNQLLNRIKGSGSDQAAALDEAMKLTGSSMKNKTTDAPSVPVGMEFIIVNGTPGSINELSGVSVNPVGPAQDVIRTINGKSTQVKKVVAYVDTLPKEGQNVLNFYLNDSSKLIKATVNLLQGPFMKYDTIYDGQQIPLNTSNANLNTYKLDQLGYFKGKLLDVSNAADIHYTGSNRNVFLYVNNVLVDLDGSGANFKLAASSYDAAANALANGNNEIKFVFKPGIEYSNTVKVNFTQTNIPVIPVPNTQGIIPFTPVSGLSNTPKYSEIAPKSKDANFTKVDDTNYNTSLKNINIFGTFSIADLGKADQVSGSLSDIANKDQYILEIKGSDDSEVNWTLNNEFFSAEDAKTAYNSGATTDKFTSKDLKDLLVYYHPDKKYFSFVLKNQTISQDGTPVAYNITLYNSGKSGPFATFRLQVSGQSTSFDILRPLPEKRIVNQNFVQVVVNAGNADSVMVGKEKAVQEGFDSDYDGTVDYPSTYKAIVTGLKANKDNKIDVVVTVGKEKLKQTITVKYVPTNIPGEQYMEAMKTSHKVFDGNLTLAFAKGTSLIRRDYDQPQQFKNQVFSGHTLYFAIANSEDGVVDRHEFETEKALSDMRSLIADGSKYFNRDFPSRFTKSSPVFWIDPGTADDIKTDAYDPVTYGADPYQLANKSQNDSSKIKNFYWRDPSNELVPSKRATLTLTYDSSIAQDAGKQMTVFFFDPDLKDWQNIGGVVDPKKHTIKVPFDRFGYYVVAKVGETYSDVIKHKYARDYIEAILAKGVMNPMDPINSFGPDSYIKRGEFTSMIVKGLQIPLNFSGAKHFDDVSIPNTISADALYDYRYIETAARAGIVKGSQPRIFMPEDVITRQDAAVIIAKALNLKLETDHDKIMKNLSKTFKDADKIDYYAQASVLAIAKKGFITGSPVDASDLKKGYMFNPTSLTLRGDAAIIVAKVMADKKLLPKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBY0</accession>
    <name>E3EBY0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR15</name>
        <name evidence="6" type="ORF">PPSC2_24215</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59104.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040103815.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11740"/>
    <dbReference type="EnsemblBacteria" id="ADO59104">
        <property type="protein sequence ID" value="ADO59104"/>
        <property type="gene ID" value="PPSC2_24215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5127"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="5"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59104.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="38173" checksum="EC7CC1A5E1FB2AC1" modified="2015-05-27" version="2">MKSNVTMRDIADKLGISSVTVSKALNDKDGVSEELKERIKTLAGEMGYRFNTVAKSMKEGLTYNIGVVIPERFTGPGQSFYLHIYQQISRALEPYGYYGILHILHREDEEQLNLPRIYYDRKVDGFILLGQVSKPYIELVQTMDQPKMFLDFYDEHADIDSVVTDNFYGAYELTNYLIAQGHRDIAYVGNIYSTSSIQDRFLGYYKSLLEHRLPLRNEWVLSDRDDEGSYVEMELPQPLPTAFVCNCDQVAHNLVHQLIGLGYRVPEDCSVVGFDNDVYATLIVPQLTTVGVDIEQMARTAVDSMMKKISHPGSRFGRVLVQGHIVYRDSVQPLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECL6</accession>
    <name>E3ECL6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Aconitate hydratase</fullName>
            <shortName evidence="10">Aconitase</shortName>
            <ecNumber evidence="10">4.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">acnA</name>
        <name evidence="13" type="ORF">PPSC2_03995</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>citrate = D-threo-isocitrate</text>
            <dbReference type="Rhea" id="RHEA:10336"/>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
            <dbReference type="ChEBI" id="CHEBI:16947"/>
            <dbReference type="EC" id="4.2.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <text evidence="10">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate metabolism; tricarboxylic acid cycle; isocitrate from oxaloacetate: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the aconitase/IPM isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.3" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369423.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16795"/>
    <dbReference type="EnsemblBacteria" id="ADO54788">
        <property type="protein sequence ID" value="ADO54788"/>
        <property type="gene ID" value="PPSC2_03995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.795"/>
    <dbReference type="eggNOG" id="COG1048">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013476_2_1_9"/>
    <dbReference type="OMA" id="NGGIMQY"/>
    <dbReference type="OrthoDB" id="363064at2"/>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00718"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003994">
        <property type="term" value="F:aconitate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047780">
        <property type="term" value="F:citrate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01580">
        <property type="entry name" value="AcnA_IRP_Swivel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.19.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044137">
        <property type="entry name" value="AcnA_IRP_Swivel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015928">
        <property type="entry name" value="Aconitase/3IPM_dehydase_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006249">
        <property type="entry name" value="Aconitase/IRP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018136">
        <property type="entry name" value="Aconitase_4Fe-4S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000573">
        <property type="entry name" value="AconitaseA/IPMdHydase_ssu_swvl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11670">
        <property type="entry name" value="PTHR11670"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00694">
        <property type="entry name" value="Aconitase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00415">
        <property type="entry name" value="ACONITASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="SSF53732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01341">
        <property type="entry name" value="aconitase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00450">
        <property type="entry name" value="ACONITASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01244">
        <property type="entry name" value="ACONITASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="10 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Aconitase" evidence="11">
        <location>
            <begin position="71"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="domain" description="Aconitase_C" evidence="12">
        <location>
            <begin position="701"/>
            <end position="828"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="903" mass="98137" checksum="E7517F10B2E550F5" modified="2011-01-11" version="1">MSGKDQFSIARSLEVNGKPYRYYSLKALEEQGKSGVAKLPFSIKVLLEAAVRQFDGRAITEEHVQQLTGWAEDRDTNKEIPFIPARIVLQDFTGVPVVVDLAAMRDTVKKAGGDPKQINPLVPVDLVIDHSVMVDAFGTSDALDYNINVEFERNEERYRFLRWAQTAFNNFRAVPPSTGIVHQVNLEYLASVAATKTIDGETVVFPDSLVGTDSHTTMINGLGVVGWGVGGIEAEAGMLGQPLYFVTPDVIGFKLTGSLSEGATATDLALTVTQMLRKKGVVGKFVEFYGPGLANISLADRATVANMAPEYGATIGFFPVDAETLAYLRSTGRSDEQVSLVEEYYKAQGMFRTADTPDPVFSDTIELDLASVVPSLAGPKRPQDRVELSRMKETFEGIIRTPVDKGGYGLSDEKIAQKVPLTHPDGSTSELGTGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVQRGLKKPGYVKTSLTPGSLVVTEYLQKAGLIEPLEALGFHVAGYGCATCIGNSGPLPDEVSQAITDHDLTVGAVISGNRNFEGRVHAQVKANYLGSPPLVVAYALAGTVNIDLVNDPLGYDQDNQPVYLKDIWPSSEEIKEAISLSLSPDMFRRKYENVFTANEKWNSIPVPEGELYEWDENSTYIQNPPFFEGLQDGVQDIKEIRNARVLALLNDSVTTDHISPAGNIAPSSPAGLYLKEHGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNNVAPGTEGGVTKYLPTDEEMSIYDASMKYQAADQNLIVIAGKEYGTGSSRDWAAKGTLLLGVKAVIAESFERIHRSNLVGMGVLPLQFQEGYGWSSLGLNGRETFDILGIDNDVKPGQELTVVAKREDGTKFEFPVTARLDSTVDIDYYHNGGILQTVLRQMIQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECP4</accession>
    <name>E3ECP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">M1-491</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">M1-491</name>
        <name evidence="7" type="ORF">PPSC2_01730</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368978.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14520"/>
    <dbReference type="EnsemblBacteria" id="ADO54338">
        <property type="protein sequence ID" value="ADO54338"/>
        <property type="gene ID" value="PPSC2_01730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.347"/>
    <dbReference type="eggNOG" id="ENOG503348G">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1106026_0_0_9"/>
    <dbReference type="OMA" id="RREWEND"/>
    <dbReference type="OrthoDB" id="1953550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032688">
        <property type="entry name" value="ABC2_membrane_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12679">
        <property type="entry name" value="ABC2_membrane_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="109"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="185"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="29703" checksum="F4B8E57FE91D19F5" modified="2011-01-11" version="1">MNSSGLFKDLIRHEFRNKGSWRKQSRNRLPRSWRLVYFSLFLIAAFAISLYFALHNQLELTRLWYVTLGLPYMIVFMGVGMLRREWENDTYGWWLTLPYPRMWLISAKWIAAILQTIVVILLLFVVGSLYALFISSTIQAYTFADAASFMIAGLNWFVMIIGFTPLVIALGLLTASTKYSTLRPLSPILWILLMGGGSIFYWSGDQRIYEQFDRVQNGHWFPFTWHFPVAVLISWVAAYALIRLNAYLLEKKLSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECX7</accession>
    <name>E3ECX7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Bifunctional purine biosynthesis protein PurH</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="8">Phosphoribosylaminoimidazolecarboxamide formyltransferase</fullName>
                <ecNumber evidence="8">2.1.2.3</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="8">AICAR transformylase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="8">IMP cyclohydrolase</fullName>
                <ecNumber evidence="8">3.5.4.10</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="8">ATIC</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="8">IMP synthase</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="8">Inosinicase</fullName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">purH</name>
        <name evidence="10" type="ORF">PPSC2_04265</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(6S)-10-formyltetrahydrofolate + 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide = (6S)-5,6,7,8-tetrahydrofolate + 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:22192"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:58467"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="EC" id="2.1.2.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>H2O + IMP = 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:18445"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="ChEBI" id="CHEBI:58467"/>
            <dbReference type="EC" id="3.5.4.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Purine metabolism; IMP biosynthesis via de novo pathway; 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide (10-formyl THF route): step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 8">Purine metabolism; IMP biosynthesis via de novo pathway; IMP from 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide: step 1/1.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">The IMP cyclohydrolase activity resides in the N-terminal region.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the PurH family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.3" evidence="8"/>
    <dbReference type="EC" id="3.5.4.10" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369480.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17075"/>
    <dbReference type="EnsemblBacteria" id="ADO54846">
        <property type="protein sequence ID" value="ADO54846"/>
        <property type="gene ID" value="PPSC2_04265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.850"/>
    <dbReference type="eggNOG" id="COG0138">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016316_5_2_9"/>
    <dbReference type="OMA" id="WRVAKFV"/>
    <dbReference type="OrthoDB" id="1049662at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00133"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003937">
        <property type="term" value="F:IMP cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004643">
        <property type="term" value="F:phosphoribosylaminoimidazolecarboxamide formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00139">
        <property type="entry name" value="PurH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024051">
        <property type="entry name" value="AICAR_Tfase_dup_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011607">
        <property type="entry name" value="MGS-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036914">
        <property type="entry name" value="MGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002695">
        <property type="entry name" value="PurH-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11692">
        <property type="entry name" value="PTHR11692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01808">
        <property type="entry name" value="AICARFT_IMPCHas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02142">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000414">
        <property type="entry name" value="AICARFT_IMPCHas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00798">
        <property type="entry name" value="AICARFT_IMPCHas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00851">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52335">
        <property type="entry name" value="SSF52335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00355">
        <property type="entry name" value="purH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51855">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 8" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="5 8" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MGS-like" evidence="9">
        <location>
            <begin position="1"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="514" mass="55584" checksum="3AE393E5196B64C7" modified="2011-01-11" version="1">MSIKRALVSVSDKRGIVEFCRELSKLGVEIVSTGGTSSLLSKEGIPVIGISEVTGFPEIMDGRVKTLHPAVHSGLLAVRDNEEHQRQMKELGLDYIDLVVVNLYPFAETIAKPGVTYEDAIENIDIGGPTMLRSAAKNHAFVSVVVDADDYSTVLEEIRKDGDTELNTRKRLAAKVFRHTASYDALISDYLSNVTGDPLPERYTVTYEKIQDLRYGENPHQQAAFYREPLAVKGTLTTAKQLHGKELSYNNINDANAALQIVKEFSEPTVVAVKHMNPCGVGIGGSIYEAYSKAYAADPTSIFGGIVAANRIIDGDTANKLSEIFLEIILAPGFTKEALEILTKKKNIRLLDLGELSPSEAKSRFVVTSIEGGMVVQQNDVHAVDPDALTVVTERAPSEEELKQLLFSWKVVKHVKSNAIVLAADNMTVGVGAGQMNRVGAAKIAIEQAGDKAKGAVLASDAYFPMGDTLELAAKAGITAVIQPGGSIKDEESIKVANEYGIAMVFTGVRHFKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED19</accession>
    <name>E3ED19_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YerC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yerC</name>
        <name evidence="1" type="ORF">PPSC2_04460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007428885.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17290"/>
    <dbReference type="EnsemblBacteria" id="ADO54888">
        <property type="protein sequence ID" value="ADO54888"/>
        <property type="gene ID" value="PPSC2_04460"/>
    </dbReference>
    <dbReference type="GeneID" id="66574086"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.893"/>
    <dbReference type="eggNOG" id="COG4496">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147939_1_0_9"/>
    <dbReference type="OMA" id="DECYRFF"/>
    <dbReference type="OrthoDB" id="1926997at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000831">
        <property type="entry name" value="Trp_repress"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038116">
        <property type="entry name" value="TrpR-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013368">
        <property type="entry name" value="YecD_YerC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40080">
        <property type="entry name" value="PTHR40080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01371">
        <property type="entry name" value="Trp_repressor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF012508">
        <property type="entry name" value="YerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02531">
        <property type="entry name" value="yecD_yerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="10959" checksum="A7DCD20BC7501806" modified="2011-01-11" version="1">MQLKKLNDKSIDQLFEAILTLKNLEECYVFFDDLCTINEIQSLSQRLEVARMLGKGSTYNQIEAETGASTATISRVKRCLNYGNDGYKMTLERLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDC1</accession>
    <name>E3EDC1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">D-galactosyl-beta-1-4-L-rhamnose phosphorylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">M1-1040</name>
        <name evidence="4" type="ORF">PPSC2_04505</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17405"/>
    <dbReference type="CAZy" id="GH112">
        <property type="family name" value="Glycoside Hydrolase Family 112"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54900">
        <property type="protein sequence ID" value="ADO54900"/>
        <property type="gene ID" value="PPSC2_04505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.903"/>
    <dbReference type="eggNOG" id="COG5426">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022367_0_0_9"/>
    <dbReference type="OMA" id="GHFHETY"/>
    <dbReference type="OrthoDB" id="205469at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004645">
        <property type="term" value="F:1,4-alpha-oligoglucan phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035080">
        <property type="entry name" value="Lact_bio_phlase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012711">
        <property type="entry name" value="Lacto-N-biose_phosphorylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035356">
        <property type="entry name" value="LBP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035363">
        <property type="entry name" value="LBP_M"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09508">
        <property type="entry name" value="Lact_bio_phlase"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="LBP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="LBP_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02336">
        <property type="entry name" value="TIGR02336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lact_bio_phlase" evidence="1">
        <location>
            <begin position="7"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="domain" description="LBP_M" evidence="2">
        <location>
            <begin position="449"/>
            <end position="659"/>
        </location>
    </feature>
    <feature type="domain" description="LBP_C" evidence="3">
        <location>
            <begin position="665"/>
            <end position="715"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="724" mass="83694" checksum="1E65DA090EF2DA22" modified="2011-01-11" version="1">MSKQTTGAFTLPGESGYEALTLKLAERWGADVIRDSDGTQLSDEIINAGYGIYSTICIIRDHNEWASRNLDKLQQCFLITNPKVAVQDYVSIYLMEDFFAEQFKVNDSKEAFNYWQVFDRTTGEEVPREQWNYERESGNVVITGIVPWHKYTVSFMVYRIWEEISMYNHTTNHWDKEHLMQIDPMYTETQQYLLDWMEDWCLHHKETTVVRFTSLFYNFAWVWGSNERNRHLFSDWGSYDFTVSSRALDLFAKRYGYSMTADDFVNGGKYRVTHIPAEQRKLDWMAFINDFVIEFGKKLIDIVHRHDKLAYVFYDDSWVGMEPYNDRFQEFGFDGLIKCVFSGYEARLCSGVKVNTHEIRLHPYLFPVGLGGLPTFMEGGDPTLDAKKYWINIRRALLREPIDRIGLGGYLHLVEPYPDFCDYIEKIANEFREIKELHHEGKPYHIKTKVAILHSWGKLRSWTLSGHFHETYMHDLIHINEALSGLPVEVQFIDFEDIRQGILQDCDVVINAGSAGSAWSGGEYWNDNKCVDLLTKWVYEGGTFIGINQPSAVEGHDSFFRMAHVLGLDEDTGSRVGHGRWAYEARDEHGLVPEGASITPKNSIYLTDGSAAVVEETSGMIALSTHAFGKGKGIYLPSFEFSWENTRLLLNIIRFAGNELHETKYITDNLYTECAYYPESKMLVVINNSDQLQRTTIETDYGKQTMELEPYDTMITHIGLTKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDH5</accession>
    <name>E3EDH5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_04760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369587.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17655"/>
    <dbReference type="EnsemblBacteria" id="ADO54954">
        <property type="protein sequence ID" value="ADO54954"/>
        <property type="gene ID" value="PPSC2_04760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.957"/>
    <dbReference type="eggNOG" id="ENOG5032VRJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_149983_0_0_9"/>
    <dbReference type="OMA" id="IRFTMLA"/>
    <dbReference type="OrthoDB" id="1929564at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="15310" checksum="E8106F9611210C16" modified="2011-01-11" version="1">MELFVTVKSLGKRKPALARQEIELNPTPETLRDLITATVALNVQKLREKQESVALIPFLTGEEIQAQGEIGKVGFGSIYNDGVPDIEEAVNTAMQAFEDGLYRVFVCDEEATELDAPLSLHAGDEIVFIRFTMLAGGLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE59</accession>
    <name>E3EE59_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Histidine kinase</fullName>
            <ecNumber evidence="1">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">yfiJ</name>
        <name evidence="12" type="ORF">PPSC2_04895</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.13.3" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54982.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599511.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17790"/>
    <dbReference type="EnsemblBacteria" id="ADO54982">
        <property type="protein sequence ID" value="ADO54982"/>
        <property type="gene ID" value="PPSC2_04895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.986"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4585">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_20_15_9"/>
    <dbReference type="OrthoDB" id="1687028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011712">
        <property type="entry name" value="Sig_transdc_His_kin_sub3_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07730">
        <property type="entry name" value="HisKA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="61"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="194"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="11">
        <location>
            <begin position="389"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="9">
        <location>
            <begin position="525"/>
            <end position="590"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="7">
        <location>
            <position position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54982.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="594" mass="67810" checksum="BCB47B4D306B6051" modified="2015-05-27" version="2">MFGCNMRWSWQEWIVAVFRILWLICFVLLSYQDRPSFPFTVVFITVLVCYSLPLFIDRSHYLWYLLAEVFLVGGISLLFAHQYELVRLFLPAVFTIAFYSRGRSHAVTFPLALMMFCLGGRGAFHWTIEDVFQNLVDASFVYGIGFGLQMAFRSIDRIKQKLELIKKQYQTLEQYSTQVEQMTLLEERYRMSRELHDSIGHTFTSIILSMETLRPYISSEEGIERLQSVLQLGRTGLEDIRKQVHQMDPMEEDPSLDLSLLNIINEFKKNTAIRVVFRTMGEPLPVLKQSKLTLYRCLQELLTNASRHGHANSIQVLLHYDHNQIILQVQDNGKGSDEIKFGFGLSGMKERLSSLQGKLYLHSKEGEGTIVTCSIPLLQDTDVSNPEIKVLLVDDQLLIRDSLGLLLKNEPDFRIQTAEDGNVAVDRCASDPPDVVLMDVHMPQMDGITATKLIKESWPNIRVIMITTFDDISYATKSLALGAEGYVLKTIDPRELANTIRLVHHGGTMITQEVAGTLFQQMTGTMKNPYGLTERELEILHCLTEGHRYKAIASKVHLSEGTVRNYISTIYSKMQVQSRDEAIEKAKTELLTDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE70</accession>
    <name>E3EE70_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carbamoyl-phosphate synthase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cpsL</name>
        <name evidence="3" type="ORF">PPSC2_04950</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17845"/>
    <dbReference type="EnsemblBacteria" id="ADO54993">
        <property type="protein sequence ID" value="ADO54993"/>
        <property type="gene ID" value="PPSC2_04950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.997"/>
    <dbReference type="eggNOG" id="COG0458">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052967_3_0_9"/>
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    <dbReference type="OrthoDB" id="1677960at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011226">
        <property type="entry name" value="ATP-grasp_fam"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029120">
        <property type="entry name" value="UCP029120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="121"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="39452" checksum="5A10E2E9868A7140" modified="2011-01-11" version="1">MKKVKVYFNRWFSVVYHYMNAIRNNEDGIPFEIYATHSDPQHMALQASDVAEVEPRTSGVEYAQFCADFCRRHEIDVFIPRWNMLDISKHLYLFDDIGTEVMVCRDTELLEQLMEKDLFYESIRQKDIVTIPDYAIASNAEQFRQAYESLIALGHKVCFKPCNAEGGMGFRIIDNERNPLEELFGHALNHISFEEAYRVLSSTETFPNLMVMELLEGYEYSIDCLADRKGKLLAAVPRRKAGGRLRLLEQHSELLKVAEKVAEAYHIPYNYNIQVKYNGERAKLLEINPRMSGGLHVSCLSGINFPYLAVKSALGHEIGSLHPQYDILASHIEQPITIRQSLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE91</accession>
    <name>E3EE91_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Damage-inducible protein DinB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yisT</name>
        <name evidence="2" type="ORF">PPSC2_05050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DinB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369647.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1032"/>
    <dbReference type="EnsemblBacteria" id="ADO55014">
        <property type="protein sequence ID" value="ADO55014"/>
        <property type="gene ID" value="PPSC2_05050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1019"/>
    <dbReference type="eggNOG" id="COG2318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_101283_0_0_9"/>
    <dbReference type="OMA" id="IHYENQR"/>
    <dbReference type="OrthoDB" id="2047691at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007837">
        <property type="entry name" value="DinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05163">
        <property type="entry name" value="DinB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16488" checksum="E7E5428A0FDC5453" modified="2011-01-11" version="1">MKTIKCMMDHLYWADGRILDALEESKTKNKDLLKLVRHVAVAERVWLDRLQGKGSAQYSLWEETEDLLAIRTMFQENAEQYRVYIEGLKEFELDEMIDYENQSGVPFRTSARDILSQVLLHGQYHRGQINQALRIESAEPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEE4</accession>
    <name>E3EEE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370026.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1416"/>
    <dbReference type="EnsemblBacteria" id="ADO55395">
        <property type="protein sequence ID" value="ADO55395"/>
        <property type="gene ID" value="PPSC2_06810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1402"/>
    <dbReference type="eggNOG" id="COG3981">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113231_3_1_9"/>
    <dbReference type="OMA" id="NALARYW"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="33"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="19798" checksum="DE3335A8F5553C45" modified="2011-01-11" version="1">MQTVRLVEPDRRWKDTYLSFYEEWKKSQEQMVPWVISIEPYDFEGMLTFLNQQKNGIGLSEGWVKSSTYWLMDADDQVVGAVNIRHDLNEHLLNAGGHIGYGIRPSARGNRYAVTMLSLALGKAKELGVSRALVVCDSDNISSKRTILRNGGTPDKDYIEEDGNRVNRFWIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEH0</accession>
    <name>E3EEH0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370052.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1442"/>
    <dbReference type="EnsemblBacteria" id="ADO55421">
        <property type="protein sequence ID" value="ADO55421"/>
        <property type="gene ID" value="PPSC2_06920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1427"/>
    <dbReference type="eggNOG" id="ENOG5030574">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1459965_0_0_9"/>
    <dbReference type="OMA" id="KKWAWWL"/>
    <dbReference type="OrthoDB" id="1444048at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="20833" checksum="EC20E3BA3440E4CE" modified="2011-01-11" version="1">MSDLYTKKEVEDYVTNVAFERPLGVSISAILLIFNGALLLVTQLLTLNALNEASTLLGMCRGMFQGFIALLGLAGTAAGIGMLFGKKWAWWLALFYFTYETMRYACAILFIPDISPALGGVQLSPAFYYLKYGMRIIWNLFFTLFMCRSTVTSFFQTSEINKWRACTALFFINGVVVGIGWWLTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEK7</accession>
    <name>E3EEK7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07100</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370085.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20080"/>
    <dbReference type="EnsemblBacteria" id="ADO55458">
        <property type="protein sequence ID" value="ADO55458"/>
        <property type="gene ID" value="PPSC2_07100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1466"/>
    <dbReference type="eggNOG" id="ENOG5032W73">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1883692_0_0_9"/>
    <dbReference type="OMA" id="YCCGASM"/>
    <dbReference type="OrthoDB" id="1934474at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="16021" checksum="BAE8B1FB7F267036" modified="2011-01-11" version="1">MSYCCGASMVGTKGTLKHYRTQVHNVPLLFCPVCHRIEVHYKVENEYEILAEYAHGDGASEIDFQDYVMEDDDTIFENCVNRESEDAFEIVKRQIDMSLDLLTVAKQMNDEKWQGELKRRLAVMSQRRSRLQHNKSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF72</accession>
    <name>E3EF72_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglycerate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-742</name>
        <name evidence="1" type="ORF">PPSC2_03125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369230.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15935"/>
    <dbReference type="EnsemblBacteria" id="ADO54592">
        <property type="protein sequence ID" value="ADO54592"/>
        <property type="gene ID" value="PPSC2_03125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.598"/>
    <dbReference type="eggNOG" id="COG0406">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072580_0_0_9"/>
    <dbReference type="OMA" id="MRLYIIR"/>
    <dbReference type="OrthoDB" id="1122642at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26728" checksum="9C3CC72FF952D837" modified="2011-01-11" version="1">MRLYIIRHADPDYPNNTITPEGHLEAKALAKRLSSHGLDRIYVSPLGRALDTMRYTADSLGMTYEVEDWTQELALKLEDTPYGRLSHWDLPGEVIRSGSPLPTHDSWKDISYYQGTQSPETFERLKVHSDEFLKRQGFERVEGRYRILKHTEDRVAVFCHGGFGLTWLAHLLELPLALVWSGFWMPPSSVTTILFDERSKEWAVPRCIGFGDVSHLYAEGLPVRPRGIITNFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFA6</accession>
    <name>E3EFA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05310</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369702.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18225"/>
    <dbReference type="EnsemblBacteria" id="ADO55069">
        <property type="protein sequence ID" value="ADO55069"/>
        <property type="gene ID" value="PPSC2_05310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1076"/>
    <dbReference type="eggNOG" id="ENOG5034ADW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2771943_0_0_9"/>
    <dbReference type="OMA" id="QCEFFEI"/>
    <dbReference type="OrthoDB" id="2031116at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="70" mass="8250" checksum="A04ADB7CBE6DB769" modified="2011-01-11" version="1">MPINRRLITDQDFSEALERHLRIRVFQDDQLIGSGGTIIRFDDQTIVVQSSVSDLAYHPRKQCEFFEIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFD2</accession>
    <name>E3EFD2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thij/pfpi family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">thiJ</name>
        <name evidence="2" type="ORF">PPSC2_05415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369728.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18325"/>
    <dbReference type="EnsemblBacteria" id="ADO55095">
        <property type="protein sequence ID" value="ADO55095"/>
        <property type="gene ID" value="PPSC2_05415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1098"/>
    <dbReference type="eggNOG" id="COG0693">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_44_5_9"/>
    <dbReference type="OMA" id="DGFADWE"/>
    <dbReference type="OrthoDB" id="1421548at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="1">
        <location>
            <begin position="4"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="18651" checksum="9F6D1BBB3D609E0C" modified="2011-01-11" version="1">MKSHVLIYDGYVSFEIMLATYFMKTKGDIVTIGVSKDPVISYEDFKVTPAVALDEVSAEDIQLLIIPGGDNTQLKTNKQLLALIKALNNDHKVIATICSATELLELAGVSPKNHVSHPSGLEIHKNIISAKPNKYVDFAIEIGKVMNIYTDDDDFNETIDFFKLFKDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFD3</accession>
    <name>E3EFD3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">abrB5</name>
        <name evidence="2" type="ORF">PPSC2_05420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55096.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1115"/>
    <dbReference type="EnsemblBacteria" id="ADO55096">
        <property type="protein sequence ID" value="ADO55096"/>
        <property type="gene ID" value="PPSC2_05420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1099"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117609_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="1">
        <location>
            <begin position="14"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55096.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="16929" checksum="9EF3CECC2D96B678" modified="2015-05-27" version="2">MKNTGMTRPLDTLGRIVIPKELRTSMGIQAGESLEFYLDVETGLLSMRKYIGVCCHICHSVQDLSYFRHSFLCKKCIQDLKGNIEDCPIPALAVKEAGDSEKSIKRSSSQHLVEHLRRLMREYPTAQQGEYAEWLGVSQSRISQLKKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFD5</accession>
    <name>E3EFD5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369731.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55098">
        <property type="protein sequence ID" value="ADO55098"/>
        <property type="gene ID" value="PPSC2_05430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1101"/>
    <dbReference type="HOGENOM" id="CLU_189149_0_0_9"/>
    <dbReference type="OMA" id="QTRKQPH"/>
    <dbReference type="OrthoDB" id="2088478at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043937">
        <property type="term" value="P:regulation of sporulation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018540">
        <property type="entry name" value="Spo0E-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037208">
        <property type="entry name" value="Spo0E-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09388">
        <property type="entry name" value="SpoOE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140500">
        <property type="entry name" value="SSF140500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9802" checksum="9CCFDCBEE931819E" modified="2011-01-11" version="1">MNKDETVTLTQQIEHARQHLLDLYAEYGLGHACVLEQSMLLDELINQFNRMFQTRKQPHPVLDQILNNDDGMFSLSPHSFYAKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN5</accession>
    <name>E3EFN5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">PhoB family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ykoG1</name>
        <name evidence="9" type="ORF">PPSC2_07410</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370153.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20390"/>
    <dbReference type="EnsemblBacteria" id="ADO55526">
        <property type="protein sequence ID" value="ADO55526"/>
        <property type="gene ID" value="PPSC2_07410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1532"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_1_9"/>
    <dbReference type="OMA" id="QVAFNGK"/>
    <dbReference type="OrthoDB" id="1020672at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="132"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="132"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26583" checksum="A1DE7C1BF797F314" modified="2011-01-11" version="1">MNQSILIVEDEEKIARLLEIELEFEGYQVSKEKNGIDGLETYCKGSWDLVLLDIMIPGINGIELLRRIRKHDANVPVILLTAKSSIADKVEGLDLGANDYVTKPFVIEELLARVRAALRVGATKDMALQVADQWLSAGDLRLHEGTREVLRGEHNIELTPREFDLLVHLLRHQRQVLSREQLLENVWGIDYIGDTNVVDVYIRYVRNKIDPTRQLPELIHTVRGIGYVLKESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFP7</accession>
    <name>E3EFP7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yxjG</name>
        <name evidence="2" type="ORF">PPSC2_08500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370388.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21105"/>
    <dbReference type="EnsemblBacteria" id="ADO55769">
        <property type="protein sequence ID" value="ADO55769"/>
        <property type="gene ID" value="PPSC2_08500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1786"/>
    <dbReference type="eggNOG" id="COG0620">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058877_0_0_9"/>
    <dbReference type="OMA" id="CYSPEAY"/>
    <dbReference type="OrthoDB" id="577156at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003871">
        <property type="term" value="F:5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03311">
        <property type="entry name" value="CIMS_C_terminal_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002629">
        <property type="entry name" value="Met_Synth_C/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038071">
        <property type="entry name" value="UROD/MetE-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01717">
        <property type="entry name" value="Meth_synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51726">
        <property type="entry name" value="SSF51726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Meth_synt_2" evidence="1">
        <location>
            <begin position="20"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="379" mass="43137" checksum="80188E916508030E" modified="2011-01-11" version="1">MSSILDNASQRKVTPFRHDMVGSFLRPQAIKDARIQFQNNEISADELRKIEDEEIIKLVEKQKSVGLQAVTDGEFRRSWWHLDFMWGLDGVEKVQLANGYQFQGVETRAETARLSGKIGHSRHPFIEDFKFLKQVAGEDAIARQTIPAPAQFLAELLRGENKESTDTYYSNLDELVTDIAKAYKSVIQALYNEGCRSLQLDDCTWGMLCDKNYWEARQHAGENVEDTKKLFARVNQETVKDLPADLVVTTHVCRGNYHSTWASSGGYEPVAETLFGIDNIDGYYLEFDTDRAGDFTPLKHLKDEKQVVLGLVSSKTGELEDKQTVINRIKEATQFVDINHICLSPQCGFASTEEGNILTEEQQWKKLAFIKEIADEIWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFY9</accession>
    <name>E3EFY9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Malonyl CoA-acyl carrier protein transacylase</fullName>
            <ecNumber evidence="4">2.3.1.39</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fabD3</name>
        <name evidence="7" type="ORF">PPSC2_09670</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>holo-[ACP] + malonyl-CoA = CoA + malonyl-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:41792"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="EC" id="2.3.1.39"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the fabD family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.39" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370639.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22135"/>
    <dbReference type="EnsemblBacteria" id="ADO56022">
        <property type="protein sequence ID" value="ADO56022"/>
        <property type="gene ID" value="PPSC2_09670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2038"/>
    <dbReference type="eggNOG" id="COG0331">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030558_0_1_9"/>
    <dbReference type="OMA" id="AANYNCP"/>
    <dbReference type="OrthoDB" id="1123553at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004314">
        <property type="term" value="F:[acyl-carrier-protein] S-malonyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.366.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001227">
        <property type="entry name" value="Ac_transferase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014043">
        <property type="entry name" value="Acyl_transferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024925">
        <property type="entry name" value="Malonyl_CoA-ACP_transAc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004410">
        <property type="entry name" value="Malonyl_CoA-ACP_transAc_FabD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016036">
        <property type="entry name" value="Malonyl_transacylase_ACP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00698">
        <property type="entry name" value="Acyl_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000446">
        <property type="entry name" value="Mct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00827">
        <property type="entry name" value="PKS_AT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55048">
        <property type="entry name" value="SSF55048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00128">
        <property type="entry name" value="fabD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_AT" evidence="6">
        <location>
            <begin position="7"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR000446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000446-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="33201" checksum="050089953A661055" modified="2011-01-11" version="1">MGKTAFIFPGQGSQAVGMAKDAYEAVPAATEVFRKADERLGFALSTLIFEGPDTALKQTSNTQPALLTASIALYEAFKEKGIRPDYVAGHSLGEYSALVASGVLTFEDAVETVRARGQFMEQAIPDGQGGMAAVLGADREALAALCRDITESGQLVELANINCPGQIVVSGTKAGVAAVAERVKEAGGKRAITLEVSGPFHSSLMKEAADKLSGKLETVKFAEAQIPVVTNVTAKPVREGSEIRQLLVEQVYSPVLWEDSVAWLLEQGVDTFVEFGPGSVLTGLVKKIDKTVKLYNMSSLESFASIIEALEAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG00</accession>
    <name>E3EG00_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA-binding protein KhpA</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">KH-domain protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">khpA</name>
        <name evidence="3" type="ORF">PPSC2_09725</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">A probable RNA chaperone. Forms a complex with KhpB which binds to cellular RNA and controls its expression. Plays a role in peptidoglycan (PG) homeostasis and cell length regulation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Forms a complex with KhpB.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the KhpA RNA-binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370648.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22190"/>
    <dbReference type="EnsemblBacteria" id="ADO56033">
        <property type="protein sequence ID" value="ADO56033"/>
        <property type="gene ID" value="PPSC2_09725"/>
    </dbReference>
    <dbReference type="GeneID" id="66577993"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2049"/>
    <dbReference type="eggNOG" id="COG1837">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_132074_1_0_9"/>
    <dbReference type="OMA" id="AVKMDKR"/>
    <dbReference type="OrthoDB" id="1940160at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00088">
        <property type="entry name" value="UPF0109"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020627">
        <property type="entry name" value="KhpA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34654">
        <property type="entry name" value="PTHR34654"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0133">Cell shape</keyword>
    <keyword evidence="2" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="76" mass="8349" checksum="EACD8EE2E6880EE8" modified="2011-01-11" version="1">MEELVIIIAKALVDHPDDVTVKTLEKDRLVVYELSVHPEDVGKIIGKQGRIAKALRTVVASAAVKMDKRVTVDIIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG27</accession>
    <name>E3EG27_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Flagellar M-ring protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fliF</name>
        <name evidence="14" type="ORF">PPSC2_09855</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">The M ring may be actively involved in energy transduction.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the FliF family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370673.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22325"/>
    <dbReference type="EnsemblBacteria" id="ADO56060">
        <property type="protein sequence ID" value="ADO56060"/>
        <property type="gene ID" value="PPSC2_09855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2077"/>
    <dbReference type="eggNOG" id="COG1766">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028108_2_1_9"/>
    <dbReference type="OMA" id="NYEVNRI"/>
    <dbReference type="OrthoDB" id="167675at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009431">
        <property type="term" value="C:bacterial-type flagellum basal body, MS ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013556">
        <property type="entry name" value="Flag_M-ring_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000067">
        <property type="entry name" value="FlgMring_FliF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006182">
        <property type="entry name" value="FliF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043427">
        <property type="entry name" value="YscJ/FliF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30046">
        <property type="entry name" value="PTHR30046"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30046:SF0">
        <property type="entry name" value="PTHR30046:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01514">
        <property type="entry name" value="YscJ_FliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08345">
        <property type="entry name" value="YscJ_FliF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004862">
        <property type="entry name" value="FliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01009">
        <property type="entry name" value="FLGMRINGFLIF"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00206">
        <property type="entry name" value="fliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0966">Cell projection</keyword>
    <keyword evidence="14" id="KW-0969">Cilium</keyword>
    <keyword evidence="14" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="444"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="domain" description="YscJ_FliF" evidence="12">
        <location>
            <begin position="46"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="YscJ_FliF_C" evidence="13">
        <location>
            <begin position="259"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="310"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="330"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR004862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO56060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="527" mass="57246" checksum="932C78D1FC852CB3" modified="2011-01-11" version="1">MNERIAQYRDKISGYWNNFSKKQKILLVSTLAFIIIAIVVLTMQFTKTEYEVAFQDLNANDAAGVIKYLDSAGIPYQLNAGGTQISVPTANADKAKVDVGSQGLIQKGSIGMSAFDQSSSAIGMTENEFNVKYNNALNGEVQQLLERMDGVQSSKAVINMPKENIFAGLEEKDKASASVQMEFEPGFTPNQQAIDGYFNLVKTAVPNLPVENITITNKEYELIPTAKGGQGGLTSGVQENMALQKKFESDVRNNVQQFLSKIVGDDKVNVLVMSQLNFDKVTSKEQMVTPVDQTKMKGIEISAQQIQESYTGSSGQTGGVAGTGTQDVPGYPGGANSGNTSSDKSSSTINYEVNRIARDIIQSPYTVKDLTINVAVEPPTGQQTLDTATQTAIQNILVNIVRASLANSGTTFTDADLAKKVSVFSQAAPAPTSTNTFFSASNPWMWGIGAAVLALLAGVIFFIVRSRRNQEEELDEELQLMPTPTEFPSITMESVTNESQVRKQLESLAKKKPDEFVNLLRTWLADE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGG3</accession>
    <name>E3EGG3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">6-carboxy-5,6,7,8-tetrahydropterin synthase</fullName>
            <ecNumber evidence="4">4.1.2.50</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Queuosine biosynthesis protein QueD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ygcM</name>
        <name evidence="12" type="ORF">PPSC2_01040</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>7,8-dihydroneopterin 3'-triphosphate + H2O = 6-carboxy-5,6,7,8-tetrahydropterin + acetaldehyde + 2 H(+) + triphosphate</text>
            <dbReference type="Rhea" id="RHEA:27966"/>
            <dbReference type="ChEBI" id="CHEBI:15343"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:58462"/>
            <dbReference type="ChEBI" id="CHEBI:61032"/>
            <dbReference type="EC" id="4.1.2.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="11">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Purine metabolism; 7-cyano-7-deazaguanine biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PTPS family. QueD subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.50" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0204"/>
    <dbReference type="EnsemblBacteria" id="ADO54191">
        <property type="protein sequence ID" value="ADO54191"/>
        <property type="gene ID" value="PPSC2_01040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.196"/>
    <dbReference type="eggNOG" id="COG0720">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111016_1_3_9"/>
    <dbReference type="OrthoDB" id="1770189at2"/>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070497">
        <property type="term" value="F:6-carboxy-5,6,7,8-tetrahydropterin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007115">
        <property type="entry name" value="6-PTP_synth/QueD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038418">
        <property type="entry name" value="6-PTP_synth/QueD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12589">
        <property type="entry name" value="PTHR12589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01242">
        <property type="entry name" value="PTPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006113">
        <property type="entry name" value="PTP_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03367">
        <property type="entry name" value="queuosine_QueD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="10">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="10">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00018141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR006113-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR006113-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="17906" checksum="544458E3321393AB" modified="2011-01-11" version="1">MKNEVSVCKIFQFDAAHQLIGHNGKCANVHGHTYKLEVVIRGKAYGPEDVSNEGFVMDFSDLKKIVNEVIIDKFDHAFLAAGNEPVLQTLESTGSKICIVGCRTTAENMSKYICFELIKANLPVWSIKLWETPTSWVEVFASDIDHKGPFYVQSGVCDYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK7</accession>
    <name>E3EGK7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Beta-galactosidase</fullName>
            <ecNumber evidence="3">3.2.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">M1-797</name>
        <name evidence="11" type="ORF">PPSC2_03360</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.</text>
            <dbReference type="EC" id="3.2.1.23"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 2 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369283.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16155"/>
    <dbReference type="CAZy" id="GH2">
        <property type="family name" value="Glycoside Hydrolase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54646">
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    </dbReference>
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    <feature type="domain" description="Glyco_hydro_2_N" evidence="8">
        <location>
            <begin position="34"/>
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        </location>
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            <begin position="163"/>
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        </location>
    </feature>
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        <location>
            <begin position="281"/>
            <end position="472"/>
        </location>
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    <feature type="domain" description="DUF4982" evidence="9">
        <location>
            <begin position="602"/>
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        <location>
            <begin position="674"/>
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    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00007401"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
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        <source>
            <dbReference type="Pfam" id="PF00703"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF02836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16355"/>
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    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO54646.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="780" mass="89455" checksum="6B91F853803F0429" modified="2011-01-11" version="1">MGSRVIMPFRTDWTFVEGNYTGAEKTDYNDGHWRDLHLPHDWSIEKSFDPHMPYGGNQAYLPRWSVGWYRKHFNVEPSSPKQRVYIQFDGIHSNSEVWLNGHFVGKRPYGYVSFQYDLTPYIRWDEENVIAVKVGNTLLPPDRWYSGAGIYRNVWLIYTDYLHITEWGTYITTPEISPDEAKVSARIQVSNHYAHAVECTIMTEILDSQGQLKGKIENRVTLAGLESEEIEQKTRVLEPELWSPDHPVLYEAQTTIYCDNTEVDRYRTPFGIRKVILDSQKGLLLNGSSLKLKGVCIHHDLGCLGAAYHDTAMKRRLEKLKEMGCNSIRFAHNPMAPELLDLCDQMGFLVVDEAFDKWKSLSYEHLYDEWWEKDLETMLVRDRNHPSVLMWSVGNEVENQGQPSMLNMLEKLVAFCHKKDPTRPVTCALEPHNTPISLRDGSIESKVEHTKLLAQRVDVLGLNYQEQWYEHYRAAMPDTLILGTETFPYYRGKDNRVKGYLPLNPWFDVANHDYVIGQFVWSGIDYLGETSYPSKGWSSGLIDTCGFRKPVSYLQQSLWSDQPVVHIAVFNDHMKSEYNPTWTMHWKSPTMEDHWTFPEYAGKLIGLVTFTNCESVELIVNEESYGERKLTDFPNHLILWELPYTPGKIRAIGRNGNQQVCEHELTTAGLPYALKLEANRAILPADGHEISHVEVTVIDQHGIVVPNQDVDLSFELHGDGRILGIDNGDLTSDEPYKGKERRTHRGRCLVIVQSGDVAGELLLQASADGELQGEVSLKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGM7</accession>
    <name>E3EGM7_PAEPS</name>
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        <submittedName>
            <fullName evidence="6">Nitrite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nasE1</name>
        <name evidence="6" type="ORF">PPSC2_03460</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54666.1"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="5">
        <location>
            <begin position="7"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12185" checksum="31B41869D02F6C9A" modified="2011-01-11" version="1">MIKNAEWLVVGHSKDFPIRIGRTIHVKGAEIAVFRTSENKLYAVENSNPHPKGGPLTEAIVSGHYIYDPLYDWKIDLQTGLVQEPDHGQIKTFAVCEEGEVVKISLETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGP2</accession>
    <name>E3EGP2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybfM1</name>
        <name evidence="2" type="ORF">PPSC2_03530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16330"/>
    <dbReference type="EnsemblBacteria" id="ADO54681">
        <property type="protein sequence ID" value="ADO54681"/>
        <property type="gene ID" value="PPSC2_03530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.691"/>
    <dbReference type="eggNOG" id="COG0586">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044208_1_0_9"/>
    <dbReference type="OMA" id="FICYFIP"/>
    <dbReference type="OrthoDB" id="1928533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="164" mass="18110" checksum="993274340396BA12" modified="2011-01-11" version="1">MEWAISMITQYGYIAIFALLALGIIGLPVPDEIIMVFVGYLSSIMVLNYSLSILVSFIGAMTGMMISYTLGKKLGQPLVDKHGKWVGLTPKRFARVKGWFARFGLWTILFGYFIPGVRHATSYLSGISAMPVRKYMLVASAGSLVWTLIFISIGYIAGANINFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGS2</accession>
    <name>E3EGS2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Holin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_05705</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the bacteriophage holin family. Cp-1 holin subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369788.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1176"/>
    <dbReference type="EnsemblBacteria" id="ADO55156">
        <property type="protein sequence ID" value="ADO55156"/>
        <property type="gene ID" value="PPSC2_05705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1162"/>
    <dbReference type="eggNOG" id="COG4824">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_125939_3_2_9"/>
    <dbReference type="OMA" id="WAAAWIN"/>
    <dbReference type="OrthoDB" id="2035976at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006480">
        <property type="entry name" value="Phage_holin_4_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05105">
        <property type="entry name" value="Phage_holin_4_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01593">
        <property type="entry name" value="holin_tox_secr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="16759" checksum="08675FB58C953618" modified="2011-01-11" version="1">MHEKIDQIWLGFSTGTLIGYFFGGWTTMLTLLWWMVVIDFFTGWAAAWINGELKSRQGYYGIFRKVTVFLLITVAHLIDGILGDAHYFRDAVVFFYLANELLSIIENVGRMGVPMPDILRNAVAIFESKSSGKKIKPTDPSDKENKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGX1</accession>
    <name>E3EGX1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rfbX</name>
        <name evidence="8" type="ORF">PPSC2_05915</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369837.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18880"/>
    <dbReference type="EnsemblBacteria" id="ADO55205">
        <property type="protein sequence ID" value="ADO55205"/>
        <property type="gene ID" value="PPSC2_05915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1211"/>
    <dbReference type="eggNOG" id="COG2244">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022017_6_3_9"/>
    <dbReference type="OMA" id="IYYRTDM"/>
    <dbReference type="OrthoDB" id="564091at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029303">
        <property type="entry name" value="Polysacc_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002797">
        <property type="entry name" value="Polysacc_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01943">
        <property type="entry name" value="Polysacc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14667">
        <property type="entry name" value="Polysacc_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="56"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="87"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="122"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="178"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="219"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="259"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="302"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="333"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="363"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="394"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="domain" description="Polysacc_synt_C" evidence="7">
        <location>
            <begin position="337"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="447" mass="50530" checksum="5E9D3072E4DFE255" modified="2011-01-11" version="1">MTLVKKRAKPRRSLLVNTSWLFGDKMIRMVFGLAVSIIMARVLGPEELGKWNYAESFFGMFLIFTTLGFDSILVRDLVKHPKDEHELLGTAVLLKLLGTLVAIVLSYSFISLLRPEDSSVRLINLILATASVFQLFDIIDYWFRAQMLSKYTVVAKNTAFVLGSTVKIILLLSGIPIWAVALCAHGEFLLGSLLLLYFFHKEGRRVNKWTFRFTTARRIMNHSWPLILSSSAVYVQARIDQVIIGELLGNEAVGQYSVALRLIEVLGFIPVVLTTAYAPVVTRSKQKGSDEYRRTLSNVYRLMFICFLVTSVPLFFLSQWVVVVLYGREFAEAGSLLSLFAIRLFFTNFSVAKSLFITNENLFKYTLLTSVIGAVTNIAFNYALIPWLGVRGSLVATILSFTISVFLMDLLFKEVKANLGWMMKSILTFWHVHITVPKVGENNHDTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH69</accession>
    <name>E3EH69_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Aminopeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yhfE</name>
        <name evidence="9" type="ORF">PPSC2_08910</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="8">Binds 2 divalent metal cations per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the peptidase M42 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370478.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21375"/>
    <dbReference type="MEROPS" id="M42.A02"/>
    <dbReference type="EnsemblBacteria" id="ADO55860">
        <property type="protein sequence ID" value="ADO55860"/>
        <property type="gene ID" value="PPSC2_08910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1878"/>
    <dbReference type="eggNOG" id="COG1363">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053520_0_0_9"/>
    <dbReference type="OMA" id="HGMERTH"/>
    <dbReference type="OrthoDB" id="900854at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008007">
        <property type="entry name" value="Peptidase_M42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023367">
        <property type="entry name" value="Peptidase_M42_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05343">
        <property type="entry name" value="Peptidase_M42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001123">
        <property type="entry name" value="PepA_GA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="322"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR001123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001123-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001123-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="345" mass="37522" checksum="F38D291149C2195F" modified="2011-01-11" version="1">MTIQLNENYIMSLLNQLLNTPSPSGYTHHVMELIRKEAEKLGVPLEWNAKGGAILTLEGQATDRTVALSAHVDTLGAMVRSITAHGTLRLTSVGGFMMNSIENEYCLIHTRSGQTYTGTILSSHPSVHVYDDARSFERKESHMEVRIDELVESKEDVLQLGISVGDFISFDARPVVTPSGFIKSRHLDDKASVAALFGLLESSVHGGWKPRHTVKLLISNYEEVGHGAAYIPEGISEMIAVDMGCIGEDLSCKETDVSICAKDSSGPYDYNMTTRLIELAKELNIPYAVDIYPHYGSDASAALKAGNNIRAALIGPGVHASHAMERTHKQAVVNTARLLAAYVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHL7</accession>
    <name>E3EHL7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yjlA</name>
        <name evidence="2" type="ORF">PPSC2_10840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370885.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2307"/>
    <dbReference type="EnsemblBacteria" id="ADO56279">
        <property type="protein sequence ID" value="ADO56279"/>
        <property type="gene ID" value="PPSC2_10840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2296"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054358_0_0_9"/>
    <dbReference type="OMA" id="WQITIIS"/>
    <dbReference type="OrthoDB" id="1019249at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032713">
        <property type="entry name" value="EmrE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13536">
        <property type="entry name" value="EmrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="268"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="36286" checksum="927C5DCCD48E4131" modified="2011-01-11" version="1">MRSIWLGVLAAFFFAFTFVLNRSMELSGGNWIWSASLRYLFMVPMLFVIVMAQHKLKPLWKVMKEQPGMWLWWSFIGFGLFYAPLCFASAYSPGWLIAGTWQITIISGSLLVPLFAEVVQTENGPVKVRGKIPIQGLLMSLIILIGIIVMQVEQSQSISTQDFLFGILPVILASFAYPLGNRKMMEVCAGRLDAYQRVLGMTIASLPFWLLLSLYGVFSAGMPSKDQTIQSALVAVFSGVIATVLFFKATDQVHGNMQKLATVEATQSLEVLFALMGELIFLSIPLPSAWSWMGMFIVILGMSLHSYVSHQKTSVQQILTKKADSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHP6</accession>
    <name>E3EHP6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppF3</name>
        <name evidence="7" type="ORF">PPSC2_10985</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370914.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23365"/>
    <dbReference type="EnsemblBacteria" id="ADO56308">
        <property type="protein sequence ID" value="ADO56308"/>
        <property type="gene ID" value="PPSC2_10985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2325"/>
    <dbReference type="eggNOG" id="COG4608">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_23_9"/>
    <dbReference type="OMA" id="YHIDRFP"/>
    <dbReference type="OrthoDB" id="1303270at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="17"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="49"/>
            <end position="56"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="35833" checksum="863B4469B322F6AF" modified="2011-01-11" version="1">MAEPLLEIDRLKTYFPVKSGFMNRTSGHVRAVDDISFTIRQGETFGLVGESGSGKSTVGRTIVRLTDKTDGTVKYKGVDLHSLSAKGMQEFRPKIQLIFQDPYSSLNPRVRIGDAIGEALLDHGIATKEEVRQIVLDVLKLCGLSEYHIDRFPHEFSGGQRQRIGIARALALQPDLIIADEPVSALDVSIQAQIINLFAKLQAERGLTYLFISHDLSVVEHLCSRIGVMYLGSMVETASRDELFGNPLHPYTKALLSAVPIPVPKLKRERILLKGDIPSPVNPPSGCKFHTRCPFAIDRCSQEIPRYREARPDHWVACHLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI52</accession>
    <name>E3EI52_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">abh</name>
        <name evidence="2" type="ORF">PPSC2_03710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369356.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16525"/>
    <dbReference type="EnsemblBacteria" id="ADO54720">
        <property type="protein sequence ID" value="ADO54720"/>
        <property type="gene ID" value="PPSC2_03710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.730"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117609_0_0_9"/>
    <dbReference type="OMA" id="KEMRISM"/>
    <dbReference type="OrthoDB" id="1467778at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="1">
        <location>
            <begin position="14"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="17460" checksum="AB2B24A8FE482752" modified="2011-01-11" version="1">MKSTGMTRPLDALGRIVIPKEMRISMDFNVGDPVEIFADEETGILAFRKYTGVTCKMCGSAEQLTYFRDSFICKECIESLKKGLNFSPVLRPAKSALANGQRSNKEPKRLRRSTQQMIESLKELMQKQPNAAQHEYAKMLEVSQARISQLKKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI98</accession>
    <name>E3EI98_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yiiG</name>
        <name evidence="2" type="ORF">PPSC2_03900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369402.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0783"/>
    <dbReference type="EnsemblBacteria" id="ADO54766">
        <property type="protein sequence ID" value="ADO54766"/>
        <property type="gene ID" value="PPSC2_03900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.774"/>
    <dbReference type="eggNOG" id="ENOG5030R7T">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_868326_0_0_9"/>
    <dbReference type="OMA" id="MAIEIMG"/>
    <dbReference type="OrthoDB" id="1428162at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024291">
        <property type="entry name" value="DUF3829"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12889">
        <property type="entry name" value="DUF3829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168976" evidence="1">
        <location>
            <begin position="20"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="36889" checksum="5DD525D60EF2A423" modified="2011-01-11" version="1">MRKLSFFIAIIMLGTMLSACSAITSTVDQAPAGVTSGESKEIEKYNAYVRLNNLMTGRINEVLVHYFEKFGGDTQPVIEKNFSFIMLGVAETEREIVDKANGYTASQPAFANVDPVVIKLTPVINDLLSVLDEMKAYYDTKGYVDDDFAKGKQLHTKLVSANLAYETVAKQYFTALQKLGNEQRLAELQKLKDSDQQIRYNALKFMIDAEATAIEMDEQGITADNVLQLDMTKFKAKYDIMTADLSTLMTISKDKKRVQKEGINSFSIESYVDSATEAKAAASKIIERINKKEPVSDSDLNGQFLNTTDGTPENFNYKLSKAVERYNEIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EID0</accession>
    <name>E3EID0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">5-formyltetrahydrofolate cyclo-ligase</fullName>
            <ecNumber evidence="3">6.3.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yqgN</name>
        <name evidence="4" type="ORF">PPSC2_06095</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(6S)-5-formyl-5,6,7,8-tetrahydrofolate + ATP = 5,10-methenyltetrahydrofolate + ADP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10488"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.3.2" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369875.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19060"/>
    <dbReference type="EnsemblBacteria" id="ADO55243">
        <property type="protein sequence ID" value="ADO55243"/>
        <property type="gene ID" value="PPSC2_06095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1250"/>
    <dbReference type="eggNOG" id="COG0212">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066245_2_2_9"/>
    <dbReference type="OMA" id="GIVFDFA"/>
    <dbReference type="OrthoDB" id="1816478at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030272">
        <property type="term" value="F:5-formyltetrahydrofolate cyclo-ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002698">
        <property type="entry name" value="FTHF_cligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024185">
        <property type="entry name" value="FTHF_cligase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23407:SF1">
        <property type="entry name" value="PTHR23407:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01812">
        <property type="entry name" value="5-FTHF_cyc-lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006806">
        <property type="entry name" value="FTHF_cligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02727">
        <property type="entry name" value="MTHFS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="7"/>
            <end position="11"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="145"/>
            <end position="153"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR006806-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="217" mass="24411" checksum="07F08E04BE489868" modified="2011-01-11" version="1">MDVCNVKNALRVQQREARDSMDPLTRQKASAVACRHAIEAWEQLRIDRNGDKLTLFSYLSFGSEISTTPLIEHCWSQGDRVLAPRVDSVTRTMELREMDQYGNMVPGVWNIPEPALTCKEWLPEMWTGIDWVVVPGLAFDRRGGRIGYGGGYYDRFTAQVEAVKRNNGSVGPLYVSLLLPGQLLAQVPMEPGDLRVDVLFTPEGRLDCNHAKSTKDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIF3</accession>
    <name>E3EIF3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369897.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19135"/>
    <dbReference type="EnsemblBacteria" id="ADO55266">
        <property type="protein sequence ID" value="ADO55266"/>
        <property type="gene ID" value="PPSC2_06180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1274"/>
    <dbReference type="eggNOG" id="ENOG5032S6I">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_143486_0_0_9"/>
    <dbReference type="OMA" id="RVQTMDH"/>
    <dbReference type="OrthoDB" id="1895461at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12400" checksum="E7641C6B102E2165" modified="2011-01-11" version="1">MSYNTVSPQTLYQARPEFQQELKKVRDQLHYQLSPYMNHTVRVQTMDHHVYEGTIVHMDADHLYLRVPQQYRSPSSGIPAPDRSYAYNNVILPLVLFNLLVIVLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIJ9</accession>
    <name>E3EIJ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370264.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1661"/>
    <dbReference type="EnsemblBacteria" id="ADO55637">
        <property type="protein sequence ID" value="ADO55637"/>
        <property type="gene ID" value="PPSC2_07865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1644"/>
    <dbReference type="HOGENOM" id="CLU_2059065_0_0_9"/>
    <dbReference type="OrthoDB" id="748700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024131">
        <property type="entry name" value="UPF0489"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12640">
        <property type="entry name" value="UPF0489"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="119" mass="13736" checksum="8FE88033A6C646DF" modified="2011-01-11" version="1">MRDHNWSFAAWEVSKIENRIQEGSLVVHVDSHFDDVPDGLVVRGLFEAKSKEDIMKVSRSYDRSLGQVPESNLMHIDNFIWALIGRGTIEEVIFVSRDKLELNVLPDVREEYAHCLPEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIS1</accession>
    <name>E3EIS1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">tetA1</name>
        <name evidence="9" type="ORF">PPSC2_09295</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370557.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21765"/>
    <dbReference type="EnsemblBacteria" id="ADO55940">
        <property type="protein sequence ID" value="ADO55940"/>
        <property type="gene ID" value="PPSC2_09295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1958"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_11_9"/>
    <dbReference type="OMA" id="ACFSVAF"/>
    <dbReference type="OrthoDB" id="626204at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
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        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
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        <property type="project" value="InterPro"/>
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        <property type="entry name" value="MFS_dom"/>
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        <property type="match status" value="1"/>
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    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="90"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="119"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="148"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="232"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="262"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="389"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="20"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="44720" checksum="888FA94A1826A9CA" modified="2011-01-11" version="1">MFKFRSHNEQTTEQTVDKHALIFGLISVFLCGIGFSIITPVVPFLVQPYTSSPEEQAIVVTLLTSVYAFCVFFAAPVLGALSDKYGRRPLLLICLLGSVIGYLVFGIGGAVWVLFAGRIMEGVTGGSISTIFAYFADIIPPEQRTKYFGWVSAVVGVGTVIGPTLGGLLAKFGYSVPMYFGAIITLLNVVYGFFFMPESLDKKHRLKEITFVKLNPYTQLANVLSMKNLKRLLVSAFLLWIPNGSLQAVFSQFTMDTFGWKPALIGLMFSIMGFQDIISQGFIMPKLLIKLSDKQIAILGMVSEIIGYGLIALSALFSFYPLIIAGMFIFGFGDSIFGPSFNGMLSKSVNSSEQGRIQGGSQSIQALARMIGPIIGGQIYVSFGHAAPAFMGMILIAVAIPVLYKRTHANM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIX1</accession>
    <name>E3EIX1_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Lysophospholipase</fullName>
        </submittedName>
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        <name evidence="2" type="primary">ycsK</name>
        <name evidence="2" type="ORF">PPSC2_09525</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55990.1"/>
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        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
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        <property type="entry name" value="Lipase_GDSL_2"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH_hydro" evidence="1">
        <location>
            <begin position="7"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="23542" checksum="795A75E7A79F147D" modified="2011-01-11" version="1">MAYHYTAIGDSLTTGAGTLLSGGFVPVYRRMAERHLRTPVSYENLGINGLTSQELLSMVRNNPLFRSAISRAELITVTIGGNDLRPYISTLAGSPGASGSSISQALNHTKEHVRQIVHALYQIKSGQREPFIIRMVGLYNPFPGVREAGVYVRQYNSFLYTLGGPNYRVANIYPIFEGNERALLSLDRIHPNSRGYRVIAEELNRLGYAPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIZ2</accession>
    <name>E3EIZ2_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Flagellar motor protein MotB</fullName>
        </submittedName>
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        <name evidence="2" type="ORF">PPSC2_10380</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56173.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2201"/>
    <dbReference type="EnsemblBacteria" id="ADO56173">
        <property type="protein sequence ID" value="ADO56173"/>
        <property type="gene ID" value="PPSC2_10380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2187"/>
    <dbReference type="eggNOG" id="COG2885">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_815971_0_0_9"/>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="282"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56173.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="304" mass="33941" checksum="D7BDDA980DFA9DEE" modified="2015-05-27" version="2">MAQHEAEARAYTVTGNPNQAASSLDERAANDAPVHQQGSSYVEISGDISIDKNTVKVTGHSNLPSGARIKGNLAVKNSMLTGYTDEATIQKDGSFVLQVHRPGIQGSMDLTVLFRPDDQDKEIRNLYGSGGNKLEGPYVYQYEENEQLLQEIRIGAEFDPEQDRHVPLIKPVWNKPKDYGSPQVWIKPDVKQKGNYYHVYARSNLLEGSDVKLTIDFPGRWQFGYDDQTKVMPDGSFSMRVKKPSLANRYTLVISFEPNEDMWTNAKQAYGTNGERLAGSLVKSADDKEGSNRIEARVQIQPKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJF6</accession>
    <name>E3EJF6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YhaZ3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yhaZ3</name>
        <name evidence="1" type="ORF">PPSC2_11905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371111.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24225"/>
    <dbReference type="EnsemblBacteria" id="ADO56506">
        <property type="protein sequence ID" value="ADO56506"/>
        <property type="gene ID" value="PPSC2_11905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2522"/>
    <dbReference type="eggNOG" id="COG4335">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064289_0_0_9"/>
    <dbReference type="OMA" id="NDIAKDH"/>
    <dbReference type="OrthoDB" id="1273957at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014825">
        <property type="entry name" value="DNA_alkylation"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08713">
        <property type="entry name" value="DNA_alkylation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="41819" checksum="2AA0F83F46D2B896" modified="2011-01-11" version="1">MAEPLKDMYTEEFLRLFGERVQAAYSPFDIEGFIHQVMDQKWDELELKERIRRISLTLGAFLPSSYEEALFILFAIDEYCSGFPYLFFPDFVEVYGQGEEHWDLSMNALERFTSKSSAEFAVRPFLLREPERMMRQMTTWAAHPSEHVRRLASEGCRPRLPWGQALPVFKRDPAPVLAVLELLKADPSLYVRKSVANNLNDIAKDHPDIVIATAQRWKGAHPDTDWIVRHGCRSLIRKSIPEVMAMFGYADDTDGVPLVAAASLTTDPIVLKIGDHCELSYVLQLREGESVRVRIEYGIDFVKARGQVSRKLFLLSDKTVSGGTRLTGTRTHRFADLTTRRHYAGAHRIVLLVNGQEVASTVIDIEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJN0</accession>
    <name>E3EJN0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ALP_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385815.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0006"/>
    <dbReference type="EnsemblBacteria" id="ADO59401">
        <property type="protein sequence ID" value="ADO59401"/>
        <property type="gene ID" value="PPSC2_28050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5946"/>
    <dbReference type="eggNOG" id="ENOG50330YS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_815972_0_0_9"/>
    <dbReference type="OMA" id="SECKFLG"/>
    <dbReference type="OrthoDB" id="894872at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="CDD" id="cd10227">
        <property type="entry name" value="ParM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040607">
        <property type="entry name" value="ALP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042051">
        <property type="entry name" value="ParM-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17989">
        <property type="entry name" value="ALP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ALP_N" evidence="1">
        <location>
            <begin position="15"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="38487" checksum="343DA68106AB3432" modified="2011-01-11" version="1">MANAEKTTKRNFITVDSGKFKTKAVRRENGEVVEKFEVSTKISTTTEKFSTSRTSFVVTLDGKSSLIGAAGGDYNYDTSKAQEVHRKATYLAVSKLAKEQKTPVVLSIGCPLSVWFNTQLREDYKRFMLNFSKDDPRDPNEGNFDIEFEVDDKPFKFKIEHLIVYPETSGFLIKNEEKFVGRSIAVVDIGGLNVNGVVYQPVGEDGLLEPNEDTFFTLNKGGNVFMTELTKALNKRFGLNIQTYEMDEHFKRGFIKVDKQETAKIFQEFTDAYLDEIRQKMKAHSWSVETLDFAWVGGGSLLFKNHILDNPVFEDSLISDNAVWDNAEGFAQATEDAFED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKF0</accession>
    <name>E3EKF0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH_59 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385891.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0083"/>
    <dbReference type="EnsemblBacteria" id="ADO59477">
        <property type="protein sequence ID" value="ADO59477"/>
        <property type="gene ID" value="PPSC2_27685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5866"/>
    <dbReference type="HOGENOM" id="CLU_1494850_0_0_9"/>
    <dbReference type="OrthoDB" id="2172213at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045403">
        <property type="entry name" value="HTH_59_Firmicutes_type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20038">
        <property type="entry name" value="HTH_59"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_59" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="21218" checksum="94DB59DD212EC24B" modified="2011-01-11" version="1">MEKSVDKVLTTKEAHEKYGVAVCTIRQWMDQKLLSEGDYRKSGSTWIMDHMAFLDLLRKKNLLEKKFEVEGETIIFQHRGLKTRDLQISYENDRVRTILTEMPYANTVIEAFRTYVKDSNLKCKHVLICKDEECSDSWFYQHSKTWVVTLRFVLDIVTKVLASQAIDSTLLENYLQENRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKU5</accession>
    <name>E3EKU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385960.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0153"/>
    <dbReference type="EnsemblBacteria" id="ADO59546">
        <property type="protein sequence ID" value="ADO59546"/>
        <property type="gene ID" value="PPSC2_27360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5791"/>
    <dbReference type="HOGENOM" id="CLU_2618745_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="8961" checksum="3EDFE267F31B1DA0" modified="2011-01-11" version="1">MKTRNKDCDVLELMKNTGYEIVTINPTEKPTYCDPFEIIDVDEEHHVSTIHAFLEACESLGIQLTEADKKRCLAFTEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKY6</accession>
    <name>E3EKY6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA (cytosine-5-)-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_28705</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="6 7">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
            <plasmid evidence="6 7">pSC2</plasmid>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-methyl-2'-deoxycytidine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:13681"/>
            <dbReference type="Rhea" id="RHEA-COMP:11369"/>
            <dbReference type="Rhea" id="RHEA-COMP:11370"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:85452"/>
            <dbReference type="ChEBI" id="CHEBI:85454"/>
            <dbReference type="EC" id="2.1.1.37"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.1.1.37" evidence="2"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386305.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0502"/>
    <dbReference type="EnsemblBacteria" id="ADO59891">
        <property type="protein sequence ID" value="ADO59891"/>
        <property type="gene ID" value="PPSC2_28705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6091"/>
    <dbReference type="eggNOG" id="COG0270">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_617979_0_0_9"/>
    <dbReference type="OrthoDB" id="182965at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003886">
        <property type="term" value="F:DNA (cytosine-5-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001525">
        <property type="entry name" value="C5_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00145">
        <property type="entry name" value="DNA_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-0614">Plasmid</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0680">Restriction system</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="443" mass="50493" checksum="466886725E0DFE97" modified="2011-01-11" version="1">MSTRQVIHQFNGKMTYNGQRIYIDKATLESAGFKPGTKFQTITDPSEHTVEFLVDAEGSNTVSKKTKKNGCIPVIDRQGKDIREALEDCDQIKVTFVQDRVIIEGMKQTAKVRSQAKSESNQLRTITFCAGAGISSECMKKAGFEEVAAVEWNPKEGSEDKFSDIYLENHPESVMFNIPMQQLKASDLPHAEVWLATLDCSDFSKASNGTKKQYHTMHLFMHLMRIFWEKPIHERPLAILIENVTEFEKVAGISLELCFKEEGYHVSKAKLNSLDYGSRTKRERFFMVASVYPGFLFPEKSGVKQTSIAEAGIISPDELEWVSPEESGTLRYFLERESKGISHNHHMTVFDVTKDAYLGTITKNHFKIQPENWIKHPTEENKYAYLKGEQIRALHQIDKQYYLGNSNKMVVECIGQSVCTQSFTAIAEALFTFLYKQNLNQMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKZ9</accession>
    <name>E3EKZ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385975.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59561">
        <property type="protein sequence ID" value="ADO59561"/>
        <property type="gene ID" value="PPSC2_27300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5776"/>
    <dbReference type="HOGENOM" id="CLU_1169764_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="27444" checksum="B98D1B55CE4A5FBA" modified="2011-01-11" version="1">MENLTHGKTLVLIALDSENSEHFTLMKVNKKIEIVDVLEVRLSQKESALEVVKWIEQEGQYRLISVCGEQYMTFVKCMEQFALTIPKDFFRALKSRFWNVQSEIVYRLKCPVHFNLEQLTFLYGLTYNTHPVKHVSDAFQLTTLMAAYAYDTETTRNIKQKGVEVVLRERLLKETIEQLSAKAFSLGYSLNFQPVIQEGKQAVELKAQKESEHFLTVGSDLHEALVELAMHLILKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL24</accession>
    <name>E3EL24_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386000.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0193"/>
    <dbReference type="EnsemblBacteria" id="ADO59586">
        <property type="protein sequence ID" value="ADO59586"/>
        <property type="gene ID" value="PPSC2_27180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5749"/>
    <dbReference type="HOGENOM" id="CLU_1946677_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14637" checksum="4CD1BBFF6173B6C0" modified="2011-01-11" version="1">MTDKHYVDKNSIRKWIISEKTEFKDGESNYARGRADGLELLLRLLDGGKFDPDPPQQPDIQPGDRVVSVSKPGLGIGVVVDLKKENLQKFTDRTWVRFGNDDFALHTRTSDLELVQSERVDASSHNRTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBL7</accession>
    <name>A0A0D5ZBL7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-355</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-355</name>
        <name evidence="2" type="ORF">PPSC2_01105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599372.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0217"/>
    <dbReference type="EnsemblBacteria" id="AKA44175">
        <property type="protein sequence ID" value="AKA44175"/>
        <property type="gene ID" value="PPSC2_01105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.209"/>
    <dbReference type="HOGENOM" id="CLU_972681_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="286" mass="32324" checksum="F69AE03FC0533FCE" modified="2015-05-27" version="1">MIFHNMYEEKHNRAGVFVVFIIFITLALLTGFIHPLITAFLIPIIIWSTLKFAKEEKARVLHHNMVVQIRIPQKAKFVTFVDGHSSLARSMKHFVWCDNAFLFIFPEEYPKSYSKSDVSKIELVRVPLVDVEYYTTHGDFYTETTVSGGDGGGVSVTGAVVGSMLGSAMGGKTMGAAGAVIGSRKKVNAVKSETMLHDTRVTMLFYNDAGETRSLKFRYEDYDTFYRLLPDKSYEAHVFRHMNGAITKESHETIGEKLKMLKKLADEELISPQEFETSKKALLDKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC29</accession>
    <name>A0A0D5ZC29_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44335">
        <property type="protein sequence ID" value="AKA44335"/>
        <property type="gene ID" value="PPSC2_25910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5443"/>
    <dbReference type="HOGENOM" id="CLU_1794607_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="16762" checksum="3923CA6F1D28C559" modified="2015-05-27" version="1">MGRPFTISLNEYESVNKQCNALQKEKAADIARHSAALFWYCLWKIAVIFPGMVGYFLCVITKTSVAKFIISDKDSYTVMGGQLLLKREDRFLLCLACPIFLLCYNVSKYGKIFFRKKNQERFQTSWSLTTMRLHPRLLTYFKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCA7</accession>
    <name>A0A0D5ZCA7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886179.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44370">
        <property type="protein sequence ID" value="AKA44370"/>
        <property type="gene ID" value="PPSC2_27020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5714"/>
    <dbReference type="HOGENOM" id="CLU_2618744_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="9147" checksum="B0615572C5522F4E" modified="2015-05-27" version="1">MIKNTEIPIQNERVELGIRYIGYTLGRDVYKDRDMLLLRKGLTLTESYIDRLKRNGVIHIYVYPGKAENSEASIHKHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCC6</accession>
    <name>A0A0D5ZCC6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF1648 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_03990</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885873.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44187">
        <property type="protein sequence ID" value="AKA44187"/>
        <property type="gene ID" value="PPSC2_03990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.794"/>
    <dbReference type="HOGENOM" id="CLU_168249_0_0_9"/>
    <dbReference type="OrthoDB" id="1914367at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012867">
        <property type="entry name" value="DUF1648"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07853">
        <property type="entry name" value="DUF1648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1648" evidence="2">
        <location>
            <begin position="14"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="13301" checksum="A409E2FC9465540C" modified="2015-05-27" version="1">MRSRLNILNLFSILLSIVPFSIYLFIYPTMPRNVAIHYNFNDVADRFVDKSSPEVWLLCALSFIAFVIMLFLQPFLRRQFKSEESSTIMKSLPGLFTLLITLVFSILGICFLLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E494</accession>
    <name>E3E494_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371238.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2665"/>
    <dbReference type="EnsemblBacteria" id="ADO56634">
        <property type="protein sequence ID" value="ADO56634"/>
        <property type="gene ID" value="PPSC2_12520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2654"/>
    <dbReference type="eggNOG" id="COG0491">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030571_0_0_9"/>
    <dbReference type="OMA" id="VITTHVH"/>
    <dbReference type="OrthoDB" id="1581636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="7"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="23073" checksum="BB09B6E3A8C4521A" modified="2011-01-11" version="1">MTSLPLKVITTHVHNDHIGNHGEFERIFVHKGDEDWLINGIQGLTIEQIRKNIRRDITLPTPERFNPDTYQPFKGKPTGLLKDGDIFDLGDRRLIIYHTPGHSPGHISVFDETKGYLFTGDLLYDEAPIYAFYPSTNPVDLVNSLEKIARIPNVKMVYGSHNTLGLNPIILVEVKIAVKFLREHDLVKFGTGIHKFNGFSVQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4B7</accession>
    <name>E3E4B7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetoacetate decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">adc3</name>
        <name evidence="4" type="ORF">PPSC2_12620</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371261.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2690"/>
    <dbReference type="EnsemblBacteria" id="ADO56657">
        <property type="protein sequence ID" value="ADO56657"/>
        <property type="gene ID" value="PPSC2_12620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2680"/>
    <dbReference type="eggNOG" id="COG4689">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077089_0_0_9"/>
    <dbReference type="OMA" id="FEVMRMG"/>
    <dbReference type="OrthoDB" id="978501at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010451">
        <property type="entry name" value="Acetoacetate_decarboxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023375">
        <property type="entry name" value="ADC_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06314">
        <property type="entry name" value="ADC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160104">
        <property type="entry name" value="SSF160104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0704">Schiff base</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="27790" checksum="A4AC9EBBCEBA6817" modified="2011-01-11" version="1">MRIDVNNTFKNFNTPLTAPAYSVPTYKFVNREYLNIIYRTDEKALRTAVPEPLEIGDPLVKFEVMWMPDVSGLGAYTEAGQVIPVRFNGEDGDYVHSMYVDNFPAIASGRELTAYPKKLGAPKLYVDSDTLVGTLDYGTLRVATATMGYKHFEMDKELAKNEICRPNFMVKIATDYNGDLRICDLVRTQITNIEVKGAWTGPARLQLFEHALAPLADLPVLEVVSASHILTDLTLNAAQPVYNYLEEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4F6</accession>
    <name>E3E4F6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polysaccharide deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12775</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371300.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2729"/>
    <dbReference type="EnsemblBacteria" id="ADO56696">
        <property type="protein sequence ID" value="ADO56696"/>
        <property type="gene ID" value="PPSC2_12775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2720"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021264_0_0_9"/>
    <dbReference type="OMA" id="RRGYDTR"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="2">
        <location>
            <begin position="40"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="27007" checksum="17CC8B6F454FF5F8" modified="2011-01-11" version="1">MLVKYLLIGLIGFISLYMLIPSFLPRIVRLGAFRKGTTKNQVAFTFDDGPHPRYTPELLDLLQDYQVKATFFVLGSQAELHPDLIRRMDREGHQIGIHNYAHTSNWLMLPWTVRRDHMKRTADIIESIIGKRPNHYRPPWGLMNAFDFFHPKSYRIVLWSLKAGDWRSRSCRKKLKATLLNGITDGSVILLHDSGDTPGADRHAPYFMLQALEEVLHQLQGRNLQFVRLDEMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4N4</accession>
    <name>E3E4N4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371534.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01545"/>
    <dbReference type="EnsemblBacteria" id="ADO56933">
        <property type="protein sequence ID" value="ADO56933"/>
        <property type="gene ID" value="PPSC2_13910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2972"/>
    <dbReference type="eggNOG" id="ENOG50306AT">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_911675_0_0_9"/>
    <dbReference type="OMA" id="CHCELAV"/>
    <dbReference type="OrthoDB" id="651543at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="SSF48239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="35432" checksum="B62CF0B1CE5DF01E" modified="2011-01-11" version="1">MEANQNIRLAIEESIQFLESTPHLGMTHGECSRRKWDGAWWHMAALYEMGEVKLIPESAITGAKYLLETQVWPTFIIFPDDHPTSESDKMKMDCCHCELAVYYMILMAYGCDLDKELPWIREWLLKHQLPDGGLNCDPEAYIHSKKSSIVSTLPPLEAILWHTDREFTEQEVVFLDEGARYLIEHRLVCSKQNRSVIDMEWLKPCFPRFFEYDILRGMSFLAEWSRRRNKTLPVGLLIEGLERLNIFRETEGLRIGRQVFDPQGPWGGQSFPLLEAVSGIGDVSPYLTRQLDRIIERLGPEYTYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X5</accession>
    <name>E3E4X5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transcription antitermination protein NusB</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Antitermination factor NusB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">nusB</name>
        <name evidence="8" type="ORF">PPSC2_15085</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the NusB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371776.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02705"/>
    <dbReference type="EnsemblBacteria" id="ADO57183">
        <property type="protein sequence ID" value="ADO57183"/>
        <property type="gene ID" value="PPSC2_15085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3219"/>
    <dbReference type="eggNOG" id="COG0781">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087843_3_3_9"/>
    <dbReference type="OMA" id="DRMPVVD"/>
    <dbReference type="OrthoDB" id="1574817at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00073">
        <property type="entry name" value="NusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035926">
        <property type="entry name" value="NusB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011605">
        <property type="entry name" value="NusB_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006027">
        <property type="entry name" value="NusB_RsmB_TIM44"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11078">
        <property type="entry name" value="PTHR11078"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01029">
        <property type="entry name" value="NusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48013">
        <property type="entry name" value="SSF48013"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01951">
        <property type="entry name" value="nusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="4 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NusB" evidence="7">
        <location>
            <begin position="6"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005952"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="17082" checksum="07A9DEAED44C6C55" modified="2011-01-11" version="1">MKRRLARELAVQSMYHMEMNEVDAAAAVDMLLQEAAEENEAEVVIKNAEVLRAYVLEHVRGTWEHKEAIDGLLADYLKGWQISRLSRVDRQILRLAVYEMIFREDVPAKVAVNEAIELSKHFGTEESGKFVNGVLGRVIQELEQLKARF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5E3</accession>
    <name>E3E5E3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">Pnkp</name>
        <name evidence="1" type="ORF">PPSC2_17330</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372243.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04670"/>
    <dbReference type="EnsemblBacteria" id="ADO57662">
        <property type="protein sequence ID" value="ADO57662"/>
        <property type="gene ID" value="PPSC2_17330"/>
    </dbReference>
    <dbReference type="GeneID" id="66576588"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3703"/>
    <dbReference type="eggNOG" id="COG4639">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_119557_0_0_9"/>
    <dbReference type="OMA" id="RINLDML"/>
    <dbReference type="OrthoDB" id="1574819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017101">
        <property type="entry name" value="P-loop_ATP/GTP-bd_All4644_prd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037081">
        <property type="entry name" value="P-loop_All4644_prd"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="17132" checksum="04A3EDC2BA13A9D6" modified="2011-01-11" version="1">MECVIFIGIQASGKSTFYKERFFKTHMRINLDMLKTRNRENMYLQTSIETMQRFVVDNTNPTVEERKKYIDACKNKGFKIIGYYFEPDYAESIKRNEQRTGKEYIPEIGIKSVMSKLEVPSYEEGFDEIYSVISSEGTFRIEKQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5I2</accession>
    <name>E3E5I2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase type 11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372282.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04850"/>
    <dbReference type="EnsemblBacteria" id="ADO57701">
        <property type="protein sequence ID" value="ADO57701"/>
        <property type="gene ID" value="PPSC2_17510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3741"/>
    <dbReference type="eggNOG" id="COG2227">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082973_0_0_9"/>
    <dbReference type="OMA" id="MIWGCEP"/>
    <dbReference type="OrthoDB" id="1431378at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="39"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="24366" checksum="27FDBC0C459CDBAD" modified="2011-01-11" version="1">MRDYWNKRFAEEGMIWGCEPSQTVTQAIDLFKKNNAHHILVPGAGYGRNTKMFSSYFEVDGIEISSSAINLAKEWDLKTNFIQESVLEFRTSKRYDGIYCYDLLHLFLLEDRKKLIQNCVMHLKEQGVMYFTCFSDSDFNNGVGRNVEEGTYEYKKGKYAHFFTEENLIEHFNNLNILEMGSIRECLTYTEKQQEYELRYVVVQNIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5P9</accession>
    <name>E3E5P9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372505.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05760"/>
    <dbReference type="EnsemblBacteria" id="ADO57926">
        <property type="protein sequence ID" value="ADO57926"/>
        <property type="gene ID" value="PPSC2_18540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3973"/>
    <dbReference type="eggNOG" id="COG1878">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030671_2_2_9"/>
    <dbReference type="OMA" id="GEHSATH"/>
    <dbReference type="OrthoDB" id="831439at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004061">
        <property type="term" value="F:arylformamidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019441">
        <property type="term" value="P:tryptophan catabolic process to kynurenine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007325">
        <property type="entry name" value="KFase/CYL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037175">
        <property type="entry name" value="KFase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04199">
        <property type="entry name" value="Cyclase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102198">
        <property type="entry name" value="SSF102198"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="27792" checksum="F33B15BA9F5DFDF1" modified="2011-01-11" version="1">MAEYLADILKLLKQKEWVDLSHAFYPEIPHFPVFDNVQVDTLFTHDDGFFVKQYCFPGQYGTHIDAPVHFVKGKRYLHELSLKELVLPLVVIDRSAAVAANSDYELTVADILDFEKEHGRIADQSFVAFRSDWSKRWPDPDAFSNKDNAGDAHCPGWSLDALCFLVEERNVAAIGHETLDTDSSVAYRKEGKLVGEYYILEQDRYQVEVLTNLDKLPPKGAVIYNIVPSIQDSPGFPVRSFAILP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5T8</accession>
    <name>E3E5T8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA and RNA helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18710</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372543.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05925"/>
    <dbReference type="EnsemblBacteria" id="ADO57965">
        <property type="protein sequence ID" value="ADO57965"/>
        <property type="gene ID" value="PPSC2_18710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4009"/>
    <dbReference type="eggNOG" id="ENOG502ZB9G">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_093769_0_0_9"/>
    <dbReference type="OMA" id="DMATEFN"/>
    <dbReference type="OrthoDB" id="983680at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="29388" checksum="3A92658FC19BCC17" modified="2011-01-11" version="1">MLTHIVPKFEKGRILKTEMLENLRDYPRSFLDIRYQDYSDGIITGMNVTVGEHALTVGRGIVKHKNRLYLLEQEQEVPYAATGRLSVLKLLFLEQTDRPDFTMHHADIVLEAEAEIGLDELELGRFKLKDGAVLRSNYQDFADMATEFNTWSDIHVPFAGLYQSTLRPETMRYFASELLKSGTNDPMDCMFALMCLNLEAVDRESIQHYIANRSGAEYKEFSHAQLHRQLVLILEGAGRGKRTAGRWQGGGAGRMIVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Z6</accession>
    <name>E3E5Z6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_19955</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372787.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07175"/>
    <dbReference type="EnsemblBacteria" id="ADO58215">
        <property type="protein sequence ID" value="ADO58215"/>
        <property type="gene ID" value="PPSC2_19955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4252"/>
    <dbReference type="eggNOG" id="COG0535">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_4_1_9"/>
    <dbReference type="OMA" id="RCCGLMG"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023885">
        <property type="entry name" value="4Fe4S-binding_SPASM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034391">
        <property type="entry name" value="Cmo-like_SPASM_containing"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13186">
        <property type="entry name" value="SPASM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01387">
        <property type="entry name" value="BtrN-like_SPASM_domain_contain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04085">
        <property type="entry name" value="rSAM_more_4Fe4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="5">
        <location>
            <begin position="39"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="397" mass="47011" checksum="3CE16094A4CB47F0" modified="2011-01-11" version="1">MQPKSNVLIDEKAFKLIKRNLKNASVSYRNATQDPAFKTDMPQTIGIKLTNRCNLRCTHCFEWNEEGYHHQMDKEEQNMDLAPDMLRQILSETKEVKSRLYMWGGEPMFHRRFDEILDVLAEDRREMTFCTNGLLIDKYLDRILDLSENLELLIAIEGFEKEHDLIRGKGTFQKTMRQMDKLIELRDQGLYKGRVTVHAVINDNMIGRMYEFLQMLEDKRLDLVLLTFPWYISKETSFKMDEYFTRNFSWLRQLEEKNISSWHAFKYKINPANIDPLMQELQRINERVWNIRVRYQPGLDYEEIDKFIHGEEMVSRCSNHCLALTSRTDILPDGKVMPCKFFSEFTIGSLREHSLKEIWNSDAYEKTRQKINHEGLTPVCSKCSVLYLHGAGSLKYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>E3E628</accession>
    <name>E3E628_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56713.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2746"/>
    <dbReference type="EnsemblBacteria" id="ADO56713">
        <property type="protein sequence ID" value="ADO56713"/>
        <property type="gene ID" value="PPSC2_12855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2737"/>
    <dbReference type="HOGENOM" id="CLU_2772045_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56713.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="7612" checksum="9615AA0F62608166" modified="2015-05-27" version="2">MTSISFVLRHLGTRIKPIIAGQVANMGADIKLQMESLTTNQLREAADHVLSFPSFKEAVAQKSIPYLNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E670</accession>
    <name>E3E670_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_13070</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371359.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2789"/>
    <dbReference type="EnsemblBacteria" id="ADO56755">
        <property type="protein sequence ID" value="ADO56755"/>
        <property type="gene ID" value="PPSC2_13070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2783"/>
    <dbReference type="eggNOG" id="ENOG50339NG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127540_1_0_9"/>
    <dbReference type="OMA" id="NKANWAK"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168188" evidence="2">
        <location>
            <begin position="32"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="7363" checksum="0DB86557006BD528" modified="2011-01-11" version="1">MISLLLMAIPVVGLVMLFVWAFSGSTNPSKANYAKAGLLWAAIVIVIYIIMAVALLPAIISSLNSSSYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E9</accession>
    <name>E3E6E9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gsiB1</name>
        <name evidence="2" type="ORF">PPSC2_18950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372595.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06160"/>
    <dbReference type="EnsemblBacteria" id="ADO58018">
        <property type="protein sequence ID" value="ADO58018"/>
        <property type="gene ID" value="PPSC2_18950"/>
    </dbReference>
    <dbReference type="GeneID" id="66576276"/>
    <dbReference type="KEGG" id="ppm:PPSC2_18950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4061"/>
    <dbReference type="eggNOG" id="COG3729">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_142865_6_2_9"/>
    <dbReference type="OMA" id="ANSHDKE"/>
    <dbReference type="OrthoDB" id="2083197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019626">
        <property type="entry name" value="Stress-induced_KGG_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10685">
        <property type="entry name" value="KGG"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="82" mass="9150" checksum="5D24643AA1E413BF" modified="2011-01-11" version="1">MARNQNQGKMSREEAGRMGGEATSKKHNKEFYQEIGKKGGQATANSHDKEFYQEIGKKGGDATAESHDKNFYRDIGRKGGRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H3</accession>
    <name>E3E6H3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19065</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372617.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4092"/>
    <dbReference type="EnsemblBacteria" id="ADO58042">
        <property type="protein sequence ID" value="ADO58042"/>
        <property type="gene ID" value="PPSC2_19065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4085"/>
    <dbReference type="HOGENOM" id="CLU_1609211_0_0_9"/>
    <dbReference type="OrthoDB" id="674695at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18838" checksum="3DF8915BE63844F8" modified="2011-01-11" version="1">MKSGASLEVKGASNRLSDTMLGKNDADPFRDIYGPGRLSHPEEWSTIIKNTQGAGVEVRILDRDIMAYAPKGSGKPGQLNIYEDASISALRHEYQHFLDDKAKGFPSLDVTYEFKNRIIMELRAYMVEIKEAERIGNKDLAEHLWNNYRDERQYLLENYGPVKLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6M4</accession>
    <name>E3E6M4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">DEAD/DEAH box helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PPSC2_20255</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372856.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07510"/>
    <dbReference type="EnsemblBacteria" id="ADO58284">
        <property type="protein sequence ID" value="ADO58284"/>
        <property type="gene ID" value="PPSC2_20255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4318"/>
    <dbReference type="eggNOG" id="COG0513">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003041_1_3_9"/>
    <dbReference type="OMA" id="TYEDRHT"/>
    <dbReference type="OrthoDB" id="626183at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Q_MOTIF" evidence="9">
        <location>
            <begin position="3"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="34"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="8">
        <location>
            <begin position="215"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="381"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="3"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="390"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="436"/>
            <end position="463"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="463" mass="51179" checksum="466B968419C00F44" modified="2011-01-11" version="1">MTLNFEALGVEQDLLDKLTEHEITQPSPVQAEAIPEIMKGKHVLARSQTGTGKTLAYLLPLLQAIDPQKKATQKLILAPSQELAMQIVREGQRYGEHRGIRVLGLIGGAAIKRQIEKLKDHPQLVVGTPGRVRELIASKKLKMHNITTIVIDEVDQMFQLGGAGDVTHILGSAQRDRQLVFLSATLNNEIQSLAQREMPDYVEIGIDPDQKTASGLEHYYFVSEERDKVDMLRRLVRHFNPRKALVFVNTTNAIGEIEAKLKHMGLTTASLYGDADKVTRSNVLARFREDKLKVLVASDVAARGLDIEGLEMVIHFDPATDSQAYVHRAGRTGRMGRKGLVVSVVTERETFIMRKFSRELGIDIAERALYGGRVVVPRPADAKRAPVRPSETRSISNGTVTENRKTPVRTEAGRPGRNSVNGSAPGKSKGAALSKAGKAQRERDRKNKGAPRWLKEKGSKPNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Z4</accession>
    <name>E3E6Z4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">KOW domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">infA</name>
        <name evidence="1" type="ORF">PPSC2_22320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373256.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09785"/>
    <dbReference type="EnsemblBacteria" id="ADO58696">
        <property type="protein sequence ID" value="ADO58696"/>
        <property type="gene ID" value="PPSC2_22320"/>
    </dbReference>
    <dbReference type="GeneID" id="66575603"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4733"/>
    <dbReference type="eggNOG" id="COG2163">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_168121_1_0_9"/>
    <dbReference type="OMA" id="RFFIIFD"/>
    <dbReference type="OrthoDB" id="1979791at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06088">
        <property type="entry name" value="KOW_RPL14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041985">
        <property type="entry name" value="RPL14_KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="11221" checksum="2D0BD71831A928B9" modified="2011-01-11" version="1">MNQQGNLQIGQLVKILKGRGAGQIAVVVSIADSRFVYIADGDKRKFDQAKKKNVLHLVPQPKISSEIVNSLNESGRVTNGKLRHAVKTFLDSSEYQAEEKGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E769</accession>
    <name>E3E769_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373460.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10875"/>
    <dbReference type="EnsemblBacteria" id="ADO58924">
        <property type="protein sequence ID" value="ADO58924"/>
        <property type="gene ID" value="PPSC2_23385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4951"/>
    <dbReference type="eggNOG" id="COG3238">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068878_4_0_9"/>
    <dbReference type="OMA" id="ETMAIYS"/>
    <dbReference type="OrthoDB" id="2005506at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006750">
        <property type="entry name" value="YdcZ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34821">
        <property type="entry name" value="PTHR34821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04657">
        <property type="entry name" value="DMT_YdcZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="122"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="15351" checksum="48DF0E19987E4BE6" modified="2011-01-11" version="1">MRGILFAFLGGACITLQGVANTRISQDIGTWQAAAVTQLIGFILAALVWMFTKDGRVSEMKQVKPMYLWGGAFAAIIIFSEVTAIQHIGVTFTISALLIAQLCLTFLVDIKGWFGIVKQKMKLPQFIGIGMMIAGVIILKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E796</accession>
    <name>E3E796_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lytR7</name>
        <name evidence="4" type="ORF">PPSC2_23510</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LytR/CpsA/Psr (LCP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373487.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11010"/>
    <dbReference type="EnsemblBacteria" id="ADO58951">
        <property type="protein sequence ID" value="ADO58951"/>
        <property type="gene ID" value="PPSC2_23510"/>
    </dbReference>
    <dbReference type="GeneID" id="66575371"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4978"/>
    <dbReference type="eggNOG" id="COG1316">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016455_1_0_9"/>
    <dbReference type="OMA" id="TGVRMDH"/>
    <dbReference type="OrthoDB" id="491753at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004474">
        <property type="entry name" value="LytR_CpsA_psr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03816">
        <property type="entry name" value="LytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00350">
        <property type="entry name" value="lytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="LytR_cpsA_psr" evidence="3">
        <location>
            <begin position="87"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="337" mass="37413" checksum="29A7E9F9C51629AB" modified="2011-01-11" version="1">MRKFLKWLGISVTATVLLVGGYYAYSIYHFTNQISVASGQDSKFKPQTQTSTNVQPVEVSLPPEWDGTERVNILLLGGDSRGEDSGRSDSVMVASVDPVTKKATLMSILRDTYVKIPGHGQSRLNAAFSYGGPDLTRQTVSDLLGIPIQYYVYTDFNGFIALVDSVGGIDLDVEKDMHYTSKADKHQFDIDLKKGMQHMDGKTALQYVRFRHDATSDFTRTERQRKFITELGSKIQSTSSLIKLPSILNSISPYIETNLSTTEMLQLASLGFNIDAKTVAKQQIPPNELVRGETIKGAQVLGVDERKLKRFIQNLFEQENKPVTTTVEAATTTNDTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7P9</accession>
    <name>E3E7P9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Pyruvate dehydrogenase E1 component subunit alpha</fullName>
            <ecNumber evidence="3 8">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">pdhA</name>
        <name evidence="11" type="ORF">PPSC2_13545</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 8">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + H(+) + pyruvate = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10480"/>
            <dbReference type="Rhea" id="RHEA-COMP:10481"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2 8">Heterodimer of an alpha and a beta chain.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="3 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371457.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01230"/>
    <dbReference type="EnsemblBacteria" id="ADO56854">
        <property type="protein sequence ID" value="ADO56854"/>
        <property type="gene ID" value="PPSC2_13545"/>
    </dbReference>
    <dbReference type="GeneID" id="66577271"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2883"/>
    <dbReference type="eggNOG" id="COG1071">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029393_1_0_9"/>
    <dbReference type="OMA" id="GMFRGVN"/>
    <dbReference type="OrthoDB" id="1248201at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017596">
        <property type="entry name" value="PdhA/BkdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516:SF41">
        <property type="entry name" value="PTHR11516:SF41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03181">
        <property type="entry name" value="PDH_E1_alph_x"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8 11" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="E1_dh" evidence="10">
        <location>
            <begin position="45"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="335"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU366007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="355" mass="39635" checksum="3F07DE92B480B385" modified="2011-01-11" version="1">MSKVPYEVYTEEVEALSVLSPDGEIINKDKLPKLTDDQLKEIMYRMVFTRTWDDRAVNLGRQGRLGFYAPVSGQEATMVGSEFALQKEDFIAPGYRDIPQLVWHGLPLYQAFLYSRGHQHGGQIPDGVNVLMPQIIIGAQILHAMGIAMGYKLKKQKQVVITYTGDGGSSEGDFYEGLNYAGVYKLPVIFFVQNNGYAITTPFSKQTAALSIAHKAVAAGIKGVKIDGMDVLAVIKAVQEAAERGRNGEGATLIEAVTYRFRPHSLSDDATKYRSKEEEGEWNAKDPIARFAKYLEKKGLWTEEDTARVKEEAKAKVNEEIKKAEKTEKMTIPGLIDSMFETTPKHLEEQKADFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T0</accession>
    <name>E3E7T0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YxcD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yxcD</name>
        <name evidence="1" type="ORF">PPSC2_14045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371563.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01700"/>
    <dbReference type="EnsemblBacteria" id="ADO56963">
        <property type="protein sequence ID" value="ADO56963"/>
        <property type="gene ID" value="PPSC2_14045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2999"/>
    <dbReference type="eggNOG" id="ENOG5033MCD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_179078_0_0_9"/>
    <dbReference type="OMA" id="NMIEAIL"/>
    <dbReference type="OrthoDB" id="2017667at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020516">
        <property type="entry name" value="Uncharacterised_YxcD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10850">
        <property type="entry name" value="DUF2653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10682" checksum="5A62F8A5246216A7" modified="2011-01-11" version="1">MILSMDEIVNAICLHMAERKGVRPTDVVVELSWEEDTGYTAEVHVQGRSQYLVEANMIEAILRYLHSEYNIRAYREQVRLDLDEEITAIVQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T7</accession>
    <name>E3E7T7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Major facilitator transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yhcA1</name>
        <name evidence="10" type="ORF">PPSC2_14080</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. EmrB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371570.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01735"/>
    <dbReference type="EnsemblBacteria" id="ADO56970">
        <property type="protein sequence ID" value="ADO56970"/>
        <property type="gene ID" value="PPSC2_14080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3006"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_28_0_9"/>
    <dbReference type="OMA" id="MFGGTVF"/>
    <dbReference type="OrthoDB" id="1108236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004638">
        <property type="entry name" value="EmrB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00711">
        <property type="entry name" value="efflux_EmrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="19"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="87"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="146"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="174"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="206"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="232"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="276"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="311"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="335"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="375"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="406"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="476"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="21"/>
            <end position="498"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="505" mass="54178" checksum="448BC4FF57CB7C45" modified="2011-01-11" version="1">MAANETAAAPSTDSSKERWLAFFAIVLGAFVAILNNSLINVAIPRLTTDLGSTTTRIQWVITGYTLASGVIVPITGYMEQRIGYKKFLILALSVFSLGTGICIFAWSDSSLIAARVLAGLGGGVIMPLSMTIIYKIMPREQIGMSLGIWGIAAMAAPAIGPTLSGYLIEWFNWRFLFIVSLPVALFAILMVILLIKEPPKVTPKPFDLPGFLLAATCAGTLLYALTNGQRDGWTSFGIVSLLFISFWALVFLIYVESGKDNAVIEISLFKNSKYTISVIASSLVMMGMYGGTFLTPLFLQNIQRVSPIDTGIILIPQAIAMAAMMPIAGKLFDKFGIVPLGLVGLTLTSFMTYHLHQLTPDTSHAWLETVMALRGLGIGICMMPLSTVGMNAVHPSKVANASTASNLVRTVAASMAIAVLTAIMQSRSAAHAQQISESITQDSAHTLQATLGSSWMSSISSLITLDATSRGIGDTFLISSIPLFCTIPLIFLFIQRKKAKTQPEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y8</accession>
    <name>E3E7Y8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">2,3-diketo-5-methylthiopentyl-1-phosphate enolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ykrW</name>
        <name evidence="7" type="ORF">PPSC2_14325</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the RuBisCO large chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371620.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01980"/>
    <dbReference type="EnsemblBacteria" id="ADO57021">
        <property type="protein sequence ID" value="ADO57021"/>
        <property type="gene ID" value="PPSC2_14325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3058"/>
    <dbReference type="eggNOG" id="COG1850">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031450_3_1_9"/>
    <dbReference type="OMA" id="IHGHPDG"/>
    <dbReference type="OrthoDB" id="848380at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043715">
        <property type="term" value="F:2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016984">
        <property type="term" value="F:ribulose-bisphosphate carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015977">
        <property type="term" value="P:carbon fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08209">
        <property type="entry name" value="RLP_DK-MTP-1-P-enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017717">
        <property type="entry name" value="Diketo-Methiopentyl-P_enolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033966">
        <property type="entry name" value="RuBisCO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000685">
        <property type="entry name" value="RuBisCO_lsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036376">
        <property type="entry name" value="RuBisCO_lsu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017443">
        <property type="entry name" value="RuBisCO_lsu_fd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036422">
        <property type="entry name" value="RuBisCO_lsu_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42704">
        <property type="entry name" value="PTHR42704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00016">
        <property type="entry name" value="RuBisCO_large"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02788">
        <property type="entry name" value="RuBisCO_large_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00157">
        <property type="entry name" value="2_3-diketo-5-methylthiopentyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00014">
        <property type="entry name" value="RuBisCO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51649">
        <property type="entry name" value="SSF51649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54966">
        <property type="entry name" value="SSF54966"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03332">
        <property type="entry name" value="salvage_mtnW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RuBisCO_large_N" evidence="6">
        <location>
            <begin position="5"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="RuBisCO_large" evidence="5">
        <location>
            <begin position="119"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="403" mass="43358" checksum="CF37D9F237760149" modified="2011-01-11" version="1">MSYCLATYRIYDDKADFNQKAQSIAIGMTVGSWTELPQAKRDAMQKHLGSVQSVDIHDGGPGERYADLTIAYPDVNFSRDIPALLVTVFGKISMDGRIKLMKLGFSEAFLSAFSGPKFGISGLREQLGVYDRPLLMSIFKSVIGLNLEELREQFTRQALGGVDLIKDDEILFENALTPIEKRVEACIRAAEEAERETGKKLLYAANLTGPTSQLRAQALKAIDAGANALLFNVLAYGYDVLHELSSDPAVSVPIAAHPSLAGAAYPSPHYGISASVLLGQLMRLAGADLVLFPSPYGSVTMPREENMAIRDELITPDSPLKACMPVPSAGIHPGLVPLIVRDFGTDVVVNAGGGIHGHPLGTEAGGRAFVQAIEAVQQNVPLAQYARTHPELQSALDTWGGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E815</accession>
    <name>E3E815_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">6,7-dimethyl-8-ribityllumazine synthase</fullName>
            <shortName evidence="7">DMRL synthase</shortName>
            <shortName evidence="7">LS</shortName>
            <shortName evidence="7">Lumazine synthase</shortName>
            <ecNumber evidence="4 7">2.5.1.78</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">ribH</name>
        <name evidence="8" type="ORF">PPSC2_14830</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(2S)-2-hydroxy-3-oxobutyl phosphate + 5-amino-6-(D-ribitylamino)uracil = 6,7-dimethyl-8-(1-D-ribityl)lumazine + H(+) + 2 H2O + phosphate</text>
            <dbReference type="Rhea" id="RHEA:26152"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58201"/>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
            <dbReference type="EC" id="2.5.1.78"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Cofactor biosynthesis; riboflavin biosynthesis; riboflavin from 2-hydroxy-3-oxobutyl phosphate and 5-amino-6-(D-ribitylamino)uracil: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Forms an icosahedral capsid composed of 60 subunits, arranged as a dodecamer of pentamers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the DMRL synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.78" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371724.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02465"/>
    <dbReference type="EnsemblBacteria" id="ADO57128">
        <property type="protein sequence ID" value="ADO57128"/>
        <property type="gene ID" value="PPSC2_14830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3165"/>
    <dbReference type="eggNOG" id="COG0054">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089358_1_1_9"/>
    <dbReference type="OMA" id="CQGVTQG"/>
    <dbReference type="OrthoDB" id="1680292at2"/>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009349">
        <property type="term" value="C:riboflavin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000906">
        <property type="term" value="F:6,7-dimethyl-8-ribityllumazine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd09209">
        <property type="entry name" value="Lumazine_synthase-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.960">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00178">
        <property type="entry name" value="Lumazine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034964">
        <property type="entry name" value="LS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002180">
        <property type="entry name" value="LS/RS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036467">
        <property type="entry name" value="LS/RS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21058">
        <property type="entry name" value="PTHR21058"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00885">
        <property type="entry name" value="DMRL_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52121">
        <property type="entry name" value="SSF52121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00114">
        <property type="entry name" value="lumazine-synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0686">Riboflavin biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="5-amino-6-(D-ribitylamino)uracil binding" evidence="7">
        <location>
            <begin position="57"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-amino-6-(D-ribitylamino)uracil binding" evidence="7">
        <location>
            <begin position="81"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="1-deoxy-L-glycero-tetrulose 4-phosphate binding" evidence="7">
        <location>
            <begin position="86"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="23"/>
        </location>
        <ligand>
            <name>5-amino-6-(D-ribitylamino)uracil</name>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>5-amino-6-(D-ribitylamino)uracil</name>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>(2S)-2-hydroxy-3-oxobutyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="16246" checksum="B7147EBA73FC0972" modified="2011-01-11" version="1">MARFLEGNLVSSGLKYGIVVGRFNEFITSKLLSGALDALQRHGAQEDEIDVAWVPGAFEISLIAQKMAASGKYDAVITLGTVIRGSTSHYDIVCNEVAKGVAASSLKTGVPIIFGVVTTENIEQAIERAGTKAGNKGWDSALAAIEMANLGKQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8B9</accession>
    <name>E3E8B9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_15700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371897.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03350"/>
    <dbReference type="EnsemblBacteria" id="ADO57311">
        <property type="protein sequence ID" value="ADO57311"/>
        <property type="gene ID" value="PPSC2_15700"/>
    </dbReference>
    <dbReference type="GeneID" id="66576841"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3352"/>
    <dbReference type="eggNOG" id="ENOG5032TSA">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_124424_0_0_9"/>
    <dbReference type="OMA" id="YDFKTAG"/>
    <dbReference type="OrthoDB" id="1410214at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168646" evidence="1">
        <location>
            <begin position="24"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="20457" checksum="9AF54D55CC95D9EF" modified="2011-01-11" version="1">MKWRKVMALVMAFSIMGGTVISAESAKDQVQLIINGEVSKDGAVVIDGKTYVPIRDFNGLVNFDPSGGKVVFDQPNVHMFLFKGDTVFGNVNKGNKVKFNVFSQIDTLKTDISGVKVAITDPSGNVKDIQSQDIKGAQKDNFWFRTNDFTYDFKTAGNYRVGFYIKESKDGSYTLVSEKVITAIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L7</accession>
    <name>E3E8L7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Flotillin-like protein FloA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yqfA3</name>
        <name evidence="5" type="synonym">floA</name>
        <name evidence="7" type="ORF">PPSC2_16885</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Found in functional membrane microdomains (FMM) that may be equivalent to eukaryotic membrane rafts FMMs are highly dynamic and increase in number as cells age. Flotillins are thought to be important factors in membrane fluidity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homooligomerizes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Membrane raft</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the flotillin-like FloA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372149.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04220"/>
    <dbReference type="EnsemblBacteria" id="ADO57566">
        <property type="protein sequence ID" value="ADO57566"/>
        <property type="gene ID" value="PPSC2_16885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3605"/>
    <dbReference type="eggNOG" id="COG4864">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_836378_0_0_9"/>
    <dbReference type="OMA" id="GIMDYYR"/>
    <dbReference type="OrthoDB" id="827327at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045121">
        <property type="term" value="C:membrane raft"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01562">
        <property type="entry name" value="FloA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022853">
        <property type="entry name" value="FloA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12127">
        <property type="entry name" value="YdfA_immunity"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="314"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="36003" checksum="F8F1779F523C9B3E" modified="2011-01-11" version="1">MRVFESGIVSILLIAVVAIIVLSVFFSFFPVMLWISALASGVRIGIITLVAMRLRRVTPSRIVNPLIKATKAGLGLNINQLESHFLAGGNVDRVINALIAAQRANIPLEFERAAAIDLAGRDVLQAVQMSVNPRVIETPIVAAVAKDGIEVKVKARVTVRANIDRLVGGAGEETIIARVGEGIVTTVGSSNSHKDVLENPDSISRTVLSKGLDAGTAFEILSIDIADVDVGKNIGAFLQTEQAEADKRIAQAKAEERRAMAVAQEQEMKARVVEMRARVVESESEVPLAMAEALRSGKLGVMDYMNLKNIEADTQMRSSLGKPNENSGNDNKSRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8P7</accession>
    <name>E3E8P7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372336.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57756">
        <property type="protein sequence ID" value="ADO57756"/>
        <property type="gene ID" value="PPSC2_17775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3799"/>
    <dbReference type="eggNOG" id="ENOG502ZUZX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071030_0_0_9"/>
    <dbReference type="OrthoDB" id="700052at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="306" mass="34949" checksum="A0166055FDE6F174" modified="2011-01-11" version="1">MSHLNKQLHSFVDISNYTKGFEIVSTQFGPDGRVYILLIDKVPERVRGMFPPASLKERRTYKILILDDHIEEVYMEGQQFNYHYVQPLHHHLLLVGARCHCYGSGQYDLNGKIIDYEGRTVNELLLGDGIQSVQVTGEGTIWTSYFDEGIFGNYGWNEPVGSSGLVAWNKEGHKIYENQAADIHDCYALNVVSEQEIWFYYYSDFSLGCISGSDRTKITFMNPSISGCSGVATDGYHFLFDGGYRKNGQYVLKKNVKPGSLSKGQHIRFLNDEQEFLQPHEQDFRKDRLLLREGSLLYQVTIGELA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8W8</accession>
    <name>E3E8W8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein translocase subunit SecD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">secD</name>
        <name evidence="10" type="ORF">PPSC2_19175</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the SecD/SecF family. SecD subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372641.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06375"/>
    <dbReference type="EnsemblBacteria" id="ADO58066">
        <property type="protein sequence ID" value="ADO58066"/>
        <property type="gene ID" value="PPSC2_19175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4108"/>
    <dbReference type="eggNOG" id="COG0342">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007894_4_2_9"/>
    <dbReference type="OMA" id="SAHLQMM"/>
    <dbReference type="OrthoDB" id="121331at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015450">
        <property type="term" value="F:protein-transporting ATPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01463_B">
        <property type="entry name" value="SecD_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005791">
        <property type="entry name" value="SecD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022813">
        <property type="entry name" value="SecD/SecF_arch_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022645">
        <property type="entry name" value="SecD/SecF_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30081">
        <property type="entry name" value="PTHR30081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02355">
        <property type="entry name" value="SecD_SecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00916">
        <property type="entry name" value="2A0604s01"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01129">
        <property type="entry name" value="secD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="247"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="270"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="340"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="369"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="418" mass="45057" checksum="C7E35471F4CCD80C" modified="2011-01-11" version="1">MKRILSFIVVVLITTGVMVGTSPGLLKSLKLGLDLKGGFEILYEAQPLEAGQRVTSQSLIQTAQSLERRINALGTTEPEVTTEGTNRIRVRLAGVSNEAEVRSMLKKPAELTFRSATAADAKKPGQYSKIELRGNDFVENGAVVGYDQLNQPEISIKVKDKAKFAEITKRLMNKELAIFLDDELLSAPTVRSELTDGSASITGSYTRDEANKLADTINLGALPLKLTEKYSQSVGATLGQLSLDQTIRAGLIGSVIILIFMIAMFRVPGLIASFCLIVHTWLVLAIFYLGGFVLTLPGIAAFVLGIGMAVDANIITYERIKEEIKSGKTIRSSVIAGSKASFRTVMDANITTIIAAAVMFGLGTGSVRGFALVLIVDIVVSILTNIFFSRFLLNLLVKADAVKKAKYFGVKESDISAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8X1</accession>
    <name>E3E8X1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yrbG3</name>
        <name evidence="9" type="ORF">PPSC2_19190</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UPF0702 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372644.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06390"/>
    <dbReference type="EnsemblBacteria" id="ADO58069">
        <property type="protein sequence ID" value="ADO58069"/>
        <property type="gene ID" value="PPSC2_19190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4111"/>
    <dbReference type="eggNOG" id="COG2323">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077149_0_1_9"/>
    <dbReference type="OMA" id="EMRSSRY"/>
    <dbReference type="OrthoDB" id="1884218at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.240.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007353">
        <property type="entry name" value="DUF421"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023090">
        <property type="entry name" value="UPF0702_alpha/beta_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04239">
        <property type="entry name" value="DUF421"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="65"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="30012" checksum="345EE4B119BBFE29" modified="2011-01-11" version="1">MSHDIFAHIFRTLLMYFIVYLVMRLMGKREIGKLSVFDLVISIMIAEIAVFSLEDIKRPLYEGLIPLGVLLILQIGISYFSLKSRRLRLLFDGRPSVLYSNGQLNKDEMAKQRYNLDDLLLQLREQNIESLDEVEYVILETTGKLTVIDKDFYDGAKHEKIKQEQNKNDLISKEQQENKVHPSPQIGGKFRYEGLPIPLIMDGKVLDRNLERMDMNRFWLKNQIQAKGHKDFKDVFLCSVNHRGDVYITPPAYGESLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E961</accession>
    <name>E3E961_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Bacitracin ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">bceB</name>
        <name evidence="8" type="ORF">PPSC2_24945</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-4 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373801.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12440"/>
    <dbReference type="EnsemblBacteria" id="ADO59268">
        <property type="protein sequence ID" value="ADO59268"/>
        <property type="gene ID" value="PPSC2_24945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5286"/>
    <dbReference type="eggNOG" id="COG0577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022800_2_2_9"/>
    <dbReference type="OMA" id="SFMPVII"/>
    <dbReference type="OrthoDB" id="366413at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027022">
        <property type="entry name" value="ABC_permease_BceB-typ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF018968">
        <property type="entry name" value="ABC_permease_BceB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="18"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="55"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="109"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="155"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="196"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="233"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="290"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="526"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="583"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="613"/>
            <end position="638"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="7">
        <location>
            <begin position="85"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR018968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="646" mass="72488" checksum="DE33D412992CA1EA" modified="2011-01-11" version="1">MNINLLILKNLKKNLSNYYLYVFALIFSVALYFSFVTLQYDPSMDEVKGSVKGAASIRAASVLLVAIVCIFLMYANNIFIKRRSKEIGLFQLIGMTKNKIFRILSAENLILYFGSLFVGIGVGFSFSKLVIMILFKTTGVEAIATLYFSNQALTQTLIVFVVIYLLIMVMNYSFIKRQSILSLFRVTSTTEGKIKKITIFEMIIGIIGISLIALGYYVSSRLFGGDFTSLNELFMAMVFILGSVIIGTFLFYKGSIRFISNIIRKSKGGYLNIHEVLSLSSIMFRMKSNALLLTIITTVSALAIGLLSLSYIAYYSADQAAEDKVPSHFAMTNVPDAEKFKALLHQHDIKYREKKIEVIQVSVKTAQIMETPMEPLNDGTDSMTLPVISDQSVEGTDVSPGQTVLTGYNDMLQKFMSLKDFGPLDLKGKTEVIPQQYVGLKKDYVIPYYFAAGGLPTAIVDETIFERLKKDVNPEIQKKSSLYIGIDILNAAQIEEADRLFAASNFNDQQSSRLEMSNNQKRNMGVIMFVVGFLGLTFLITSGCILYFKQMDESEDEKANYTVLRKLGFTQSDLLRGIKIKQLFNFGIPLVIGLSHSYFAVQSGWFLFGTEVWMPMIIVMVLYTALYSIFGVLSILYYKKVIKAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E979</accession>
    <name>E3E979_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">3-hydroxy-3-methylglutaryl-ACP synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pksG</name>
        <name evidence="4" type="ORF">PPSC2_15895</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thiolase-like superfamily. HMG-CoA synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371938.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03590"/>
    <dbReference type="EnsemblBacteria" id="ADO57352">
        <property type="protein sequence ID" value="ADO57352"/>
        <property type="gene ID" value="PPSC2_15895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3393"/>
    <dbReference type="eggNOG" id="COG3425">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008065_3_2_9"/>
    <dbReference type="OMA" id="DDAYNWI"/>
    <dbReference type="OrthoDB" id="872193at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004421">
        <property type="term" value="F:hydroxymethylglutaryl-CoA synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006084">
        <property type="term" value="P:acetyl-CoA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010142">
        <property type="term" value="P:farnesyl diphosphate biosynthetic process, mevalonate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013746">
        <property type="entry name" value="HMG_CoA_synt_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013528">
        <property type="entry name" value="HMG_CoA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08540">
        <property type="entry name" value="HMG_CoA_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01154">
        <property type="entry name" value="HMG_CoA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMG_CoA_synt_N" evidence="2">
        <location>
            <begin position="4"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="HMG_CoA_synt_C" evidence="3">
        <location>
            <begin position="275"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="420" mass="46937" checksum="1377493EF45FC527" modified="2011-01-11" version="1">MVLVGIEAMNVFGGSAYLDVMQLAQHRQLDPARFENLLMKEKAVALPYEDPVTFGVNAAKPLVDALSEAEKNRIEMLITCTESGIDFGKSISTYIHHYLGLNRNCRLFELKQACYSGTAGFQMAVNFILSQVSPGAKALVIASDISRFIAAEGGDVLSEDWSYAEPSGGAGAVAMLISENPHIFQVDAGANGYYGYEVMDTCRPIPDSEAGDADLSLMSYLDCCEQAFLEYQKRVKGVDYKDTFQYLSFHTPFGGMVKGAHRTMMRRMTQAKPNEIEADYLQRVKPGLEYCQRVGNIMGATLYLSLAGTIDKGTFDSPKRIGCFSYGSGCCSEFYSGVVMPQGQEYLRRFEIERNLDDRYQLSMDEYESLLKGSGAVRFGTRNTKLDFQLVSGVIDSGKGRQRLYLEEIYEFHRKYRWES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9C2</accession>
    <name>E3E9C2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ytcP3</name>
        <name evidence="7" type="ORF">PPSC2_16085</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371981.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03775"/>
    <dbReference type="EnsemblBacteria" id="ADO57395">
        <property type="protein sequence ID" value="ADO57395"/>
        <property type="gene ID" value="PPSC2_16085"/>
    </dbReference>
    <dbReference type="GeneID" id="66576758"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3437"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="MMWGNFF"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="80"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="119"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="153"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="192"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="265"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="84"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="33030" checksum="9B786C16C8A211FD" modified="2011-01-11" version="1">MEQPLLKPKLRKKESLGSRIFNIVNSTLLILIALTCLLPFLNIIASSFASTEEVVAKKFILFPVTFSLDAYRYILSTPTIFRGLGVSVGVTIVGTVVSMIFTAFMAYGLSRKYLLGRNTINFIVVFSMLFSGGMIPTFLVVKSMGLINSYWSLILPVAINAFNLIIMRNFFQALPDDLEESAKMDGCNDFGIFFKIMLPLALPSIATISLFYAVAYWNTYMHAILYINDSAKWPIQVLLRQIVIVSSGMQAEGTAVDVIPPAQTIKMAVIVIATVPMLIVYPFVQKHFVKGALLGAVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9G7</accession>
    <name>E3E9G7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetyltransferase</fullName>
            <ecNumber evidence="3">2.3.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">argH1</name>
        <name evidence="3" type="ORF">PPSC2_17030</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57598.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025674283.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04365"/>
    <dbReference type="EnsemblBacteria" id="ADO57598">
        <property type="protein sequence ID" value="ADO57598"/>
        <property type="gene ID" value="PPSC2_17030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3637"/>
    <dbReference type="eggNOG" id="COG1246">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_119519_0_0_9"/>
    <dbReference type="OrthoDB" id="1823496at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004042">
        <property type="term" value="F:acetyl-CoA:L-glutamate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103045">
        <property type="term" value="F:methione N-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010167">
        <property type="entry name" value="NH2A_AcTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30602">
        <property type="entry name" value="PTHR30602"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="2">
        <location>
            <begin position="8"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57598.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17528" checksum="E9A91FD5905FC560" modified="2015-05-27" version="2">MASVCKDVLCRSAVPEDVEPLYQMISGYAERGIMLPRSREVLTRQLELFIVAEVDGEVVGCGSLCKLGADLVEIRSLGISEGHKGMGIGSKLVEGLIREARRQHIPKIMALTYEVSFFIKNGFDVVSKEIFPEKVWTDCIHCSKQNNCDEIAVLKVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9I5</accession>
    <name>E3E9I5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase type 12</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372197.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04445"/>
    <dbReference type="EnsemblBacteria" id="ADO57616">
        <property type="protein sequence ID" value="ADO57616"/>
        <property type="gene ID" value="PPSC2_17110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3655"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069129_5_2_9"/>
    <dbReference type="OMA" id="ICCDSLN"/>
    <dbReference type="OrthoDB" id="1515497at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="40"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="257" mass="30172" checksum="DA33D86ED84A18E6" modified="2011-01-11" version="1">MASYRKFAYVYDELMQDMPYPDWLRFARQAWDRYGMPHTVAELGCGTGSITIPLVNSGFEVAGIDLSSDMLAVARRKMETTPQGQRLFREGSVRWIQQDMREWILPEPVDSVISFCDCLNYLLEEEDIISTFRRTYTGLKPGGTFLFDVHHPQTFLRYDEEQPFVLDERSISYIWTCALDTPRCEIEHHLSIFARAEHEGRDLYQRFEEIHVQRAYDPDWMKAELSKAGFRDVKVYADFEWVEAEDDAARLFYVAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9V0</accession>
    <name>E3E9V0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 16">Homoserine dehydrogenase</fullName>
            <ecNumber evidence="6 16">1.1.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="primary">hom</name>
        <name evidence="19" type="ORF">PPSC2_19330</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>L-homoserine + NAD(+) = H(+) + L-aspartate 4-semialdehyde + NADH</text>
            <dbReference type="Rhea" id="RHEA:15757"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57476"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="1.1.1.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 16">
            <text>L-homoserine + NADP(+) = H(+) + L-aspartate 4-semialdehyde + NADPH</text>
            <dbReference type="Rhea" id="RHEA:15761"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57476"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="1.1.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 16">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 3/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 16">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 3/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 17">Belongs to the homoserine dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.3" evidence="6 16"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372658.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06530"/>
    <dbReference type="EnsemblBacteria" id="ADO58083">
        <property type="protein sequence ID" value="ADO58083"/>
        <property type="gene ID" value="PPSC2_19330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4125"/>
    <dbReference type="eggNOG" id="COG0460">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009116_1_0_9"/>
    <dbReference type="OMA" id="LMFYGPG"/>
    <dbReference type="OrthoDB" id="1464088at2"/>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00063"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004412">
        <property type="term" value="F:homoserine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005106">
        <property type="entry name" value="Asp/hSer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016204">
        <property type="entry name" value="HDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001342">
        <property type="entry name" value="HDH_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019811">
        <property type="entry name" value="HDH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00742">
        <property type="entry name" value="Homoserine_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03447">
        <property type="entry name" value="NAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000098">
        <property type="entry name" value="Homoser_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01042">
        <property type="entry name" value="HOMOSER_DHGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 16" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="16" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="9 16" id="KW-0412">Isoleucine biosynthesis</keyword>
    <keyword evidence="13 16" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="11 15 16" id="KW-0521">NADP</keyword>
    <keyword evidence="12 16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 16" id="KW-0791">Threonine biosynthesis</keyword>
    <feature type="domain" description="ACT" evidence="18">
        <location>
            <begin position="350"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="14">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <begin position="9"/>
            <end position="16"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR000098-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR000098-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU000579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ADO58083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="428" mass="46693" checksum="BED4EA0ACDA2A6AE" modified="2011-01-11" version="1">MKPVKVGLLGLGTVGTGVVRIVEGNQEDLSRQVGSPIIIEKIAVKNIDKYRSIEVDTAKLTEDPWEVIRDPEIDVIIEVMGGIDQTKEYILEALERGKHIVTANKDLMALHGSEVLAKAQEKQCDIFYEASVAGGIPIIRTLIEGFSSDRITRIMGIVNGTTNFILTKMSQEGASYEEVLREAQELGYAESDPTSDVEGLDAARKMAILGTLGFRSNVELKDVSVSGISKVTSEDIAFAKKLGYQMKLLGIAERQGDEFTINVQPTMVRKQHPLASVNGVFNAVYVHGEAVGETMFYGAGAGEMPTATSVVADLVAVVKNLKLGVNGLKAIVPYNPKKICNDEDVYFKNFVLLHVDDKAGVLAQITQVFAEFNVSLASVVQQPNETNPDAEIIIVTHLASKASMKKVLEHFETLDVIRRIKSVYRVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA10</accession>
    <name>E3EA10_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372715.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06830"/>
    <dbReference type="EnsemblBacteria" id="ADO58143">
        <property type="protein sequence ID" value="ADO58143"/>
        <property type="gene ID" value="PPSC2_19610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4182"/>
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020211_9_2_9"/>
    <dbReference type="OMA" id="RVDAHTH"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032834">
        <property type="entry name" value="NatK_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14501">
        <property type="entry name" value="HATPase_c_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HATPase_c_5" evidence="1">
        <location>
            <begin position="135"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="241" mass="27536" checksum="FC1C2E8860EE84E4" modified="2011-01-11" version="1">MSIIGIIGMNVIIVFLMDKLIEKSNLSRFFQKQMLMQEKHYKETTRSLSDIKRSIHDFKKQLIFVRACLQEQRTEEGVNHINQTLENIESPRLHITTGHLVIDALVNHTFSIADKSGIAFFHQIHINPANISIGSHDLCIVLGNVFDNAIEAVRQLPRKKEHSIHLEILTDNSALWIYVRNSKSNCLNTAFSTKTYTPPLKKHGYGLLNIHQVIKKYGGYLNTTITDSNFQITIMIPCNNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA25</accession>
    <name>E3EA25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58158.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324666.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4208"/>
    <dbReference type="EnsemblBacteria" id="ADO58158">
        <property type="protein sequence ID" value="ADO58158"/>
        <property type="gene ID" value="PPSC2_19685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4197"/>
    <dbReference type="eggNOG" id="COG2244">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_684590_0_0_9"/>
    <dbReference type="OrthoDB" id="845696at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="218"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="259"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="289"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="335"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="358"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="388"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58158.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="421" mass="46561" checksum="46C85173709954CB" modified="2015-05-27" version="2">MNNRLRSLMFPLFNVLLNGFNFFFHIAASWYLTGQAYGQANALLALFALLSVLGLSIQLLTAKLVSKGDKKLPLRSLPLGSLLLKAPLVLTVLAMIILLSVHPLLHSLLGVESGPLFMLYALIGLHILVSSCRGDLHGRERMLALNVNYYIEVLGKLSLFFVLAALGLKLEALLLANCGGMLLSLLHGWIVSARGVSLSTHSGERIPSGLWKSLGQDFTDSLMTNLFILFCISIDMLYVQHYFPEQASSYAIALKYSQLVYYVSYSLIAAFIPKIGAQGHDHQALGKLIAIYAGLMAVAALCVYVGTTFVFPTSIPILFGASYQSAEVYIPWGGWVYWLFSIVMFFVHVHVLVGRRKFIFSLVAGAAVLVAAFHMSHTDPVDFLLSEFIVYGAMSLYFVIDAYIYLFKIKIRGDSPHEYHT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAH0</accession>
    <name>E3EAH0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yokL3</name>
        <name evidence="2" type="ORF">PPSC2_21750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373155.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4641"/>
    <dbReference type="EnsemblBacteria" id="ADO58588">
        <property type="protein sequence ID" value="ADO58588"/>
        <property type="gene ID" value="PPSC2_21750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4628"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_3_2_9"/>
    <dbReference type="OMA" id="PYFPFSM"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="7"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="21224" checksum="944588F074A0B24D" modified="2011-01-11" version="1">MYTEKDLTIRPATEEDLYALWTLTYKEEAPEWKQWDAPYYEHKTLTFEEYLKEKNKRVEQDDFWLIEVEGKVIGSVSYYWEHKPSLWLEMGIGIYDSGYWSGGYGTRALRLWIDHLFNTLPLVRVGFTTWSGNHRMMKVGEKLGMTLEARLRKCRYYNGKYYDSIRMGLLREEWEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAM5</accession>
    <name>E3EAM5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="12 13 14">UvrABC system protein B</fullName>
            <shortName evidence="13">Protein UvrB</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Excinuclease ABC subunit B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">uvrB</name>
        <name evidence="19" type="synonym">uvrB1</name>
        <name evidence="19" type="ORF">PPSC2_22750</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10 13">The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11 13 14">Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13 14">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="13">The beta-hairpin motif is involved in DNA binding.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 13 14">Belongs to the UvrB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373322.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10265"/>
    <dbReference type="EnsemblBacteria" id="ADO58783">
        <property type="protein sequence ID" value="ADO58783"/>
        <property type="gene ID" value="PPSC2_22750"/>
    </dbReference>
    <dbReference type="GeneID" id="66575510"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4817"/>
    <dbReference type="eggNOG" id="COG0556">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009621_2_1_9"/>
    <dbReference type="OMA" id="EYVDRMV"/>
    <dbReference type="OrthoDB" id="95696at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009381">
        <property type="term" value="F:excinuclease ABC activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00204">
        <property type="entry name" value="UvrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001943">
        <property type="entry name" value="UVR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036876">
        <property type="entry name" value="UVR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004807">
        <property type="entry name" value="UvrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041471">
        <property type="entry name" value="UvrB_inter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024759">
        <property type="entry name" value="UvrB_YAD/RRR_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24029">
        <property type="entry name" value="PTHR24029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12344">
        <property type="entry name" value="UvrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17757">
        <property type="entry name" value="UvrB_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46600">
        <property type="entry name" value="SSF46600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00631">
        <property type="entry name" value="uvrb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="15" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 13 14" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 13 14" id="KW-0228">DNA excision</keyword>
    <keyword evidence="9 13 14" id="KW-0234">DNA repair</keyword>
    <keyword evidence="8 13 14" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="4 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13 14" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="17">
        <location>
            <begin position="32"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="18">
        <location>
            <begin position="436"/>
            <end position="602"/>
        </location>
    </feature>
    <feature type="domain" description="UVR" evidence="16">
        <location>
            <begin position="628"/>
            <end position="663"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="15">
        <location>
            <begin position="263"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="15">
        <location>
            <begin position="624"/>
            <end position="651"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Beta-hairpin" evidence="13">
        <location>
            <begin position="98"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00026033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00029504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ADO58783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="663" mass="75894" checksum="09D5D5F3DFE721B3" modified="2011-01-11" version="1">MSDIVVSDKTFEIQSEFQPQGDQPQAIFELVEGIAEGKKHQTLLGATGTGKTYTIAQTIAKLNRPTLVIAHNKTLAAQLASEFKEFFPNNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSSINEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPKEYSSLLLSLRVGMEKPRNQILSRLVDIQYQRNDINFVRGTFRVRGDVVEIFPASHGENAIRVELFGDEIERITEINVLTGELIGEREHIAIFPASHFVTHEDTMRVALVNIERELEERLAELKEQGKLLEAQRLEQRTRYDIEMMREVGFCSGVENYSGPLTFRERGATPYTLLDYFPDDMLIVIDESHVTLPQIRAMYNGDQARKNVLVEHGFRLPSALDNRPLKFEEFEDKVNQIIYVSATPGPYEMEKCDTMVQQIIRPTGLLDPIIEVRPSKGQIDDLINEIRQRIEREERVLVTTLTKKMAEDLTDYLKEVGIKVRYMHSEIKTLERMAILRDLRLGTFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGRAARNSDGRVIMYGDKITDSMDKAIKETERRRAIQIQYNEEHGITPQTIRKKIRDVIEATKTAESKNDYLPNETGKLSKKERQSLIQRLEAEMKDAAKNLQFERAAELRDALLELRAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB91</accession>
    <name>E3EB91_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glucose-6-phosphate 1-dehydrogenase</fullName>
            <shortName evidence="5">G6PD</shortName>
            <ecNumber evidence="5">1.1.1.49</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">zwf</name>
        <name evidence="9" type="synonym">zwf3</name>
        <name evidence="9" type="ORF">PPSC2_20895</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>D-glucose 6-phosphate + NADP(+) = 6-phospho-D-glucono-1,5-lactone + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:15841"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57955"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:61548"/>
            <dbReference type="EC" id="1.1.1.49"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Carbohydrate degradation; pentose phosphate pathway; D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage): step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the glucose-6-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.49" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372992.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08125"/>
    <dbReference type="EnsemblBacteria" id="ADO58423">
        <property type="protein sequence ID" value="ADO58423"/>
        <property type="gene ID" value="PPSC2_20895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4457"/>
    <dbReference type="eggNOG" id="COG0364">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013524_5_0_9"/>
    <dbReference type="OMA" id="VEICVYE"/>
    <dbReference type="OrthoDB" id="1153269at2"/>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004345">
        <property type="term" value="F:glucose-6-phosphate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00966">
        <property type="entry name" value="G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001282">
        <property type="entry name" value="G6P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019796">
        <property type="entry name" value="G6P_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022675">
        <property type="entry name" value="G6P_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022674">
        <property type="entry name" value="G6P_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23429">
        <property type="entry name" value="PTHR23429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02781">
        <property type="entry name" value="G6PD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00479">
        <property type="entry name" value="G6PD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000110">
        <property type="entry name" value="G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00079">
        <property type="entry name" value="G6PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00871">
        <property type="entry name" value="zwf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00069">
        <property type="entry name" value="G6P_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1 5" id="KW-0313">Glucose metabolism</keyword>
    <keyword evidence="2 5" id="KW-0521">NADP</keyword>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G6PD_N" evidence="7">
        <location>
            <begin position="19"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="G6PD_C" evidence="8">
        <location>
            <begin position="203"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="253"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="21"/>
            <end position="28"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="98"/>
            <end position="99"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="161"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="354"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="359"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="518" mass="59308" checksum="35882DE78D2C9D34" modified="2011-01-11" version="1">MADIPVKESLVTQGAVLFIFGATGDLARRKLFPAIYSLYREGKLAEDFAVIGVARRPRTEAEFRNDLYASIQEFSRYKAENDQEWQAFAEHFEYKSLDINNVDGFHELRQQTEAIEGKFNIPGNRLFYLALAPELFGSVSKSLKEGGMLDGKGWNRLVIEKPFGYNLESAQELNIEIREVFAEEEIYRIDHYLGKEMVQNIEVIRFANAFFEPLWNNKHIANVQITLSETVGVEERGGYYDHSGALRDMGQNHMLQMLTMIAMEPPSRLLPEDIRDEKVKVLRSLRPFESSEDVKTNVVRGQYTEGSYRGQQLPGYRQEDKVDPQSNTETYFASRVFVDNFRWAGVPFYIRTGKRLPVKTTEIVVEFKSMPTNVYLGQKHKLEPNLLVIRVNPMEGIYIKINAKKPGSESDIEPLAMDFCQSCMVGINSPEAYERLLMDAIEGDSTYFTRWDEVATAWGFVDRIAKAWQQTPDTLETYAAGSWGPDGAHKLLEQDGYKWWPVSGQDEDNVIWRVGGTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBC2</accession>
    <name>E3EBC2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_21125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58454.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324719.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08355"/>
    <dbReference type="EnsemblBacteria" id="ADO58454">
        <property type="protein sequence ID" value="ADO58454"/>
        <property type="gene ID" value="PPSC2_21125"/>
    </dbReference>
    <dbReference type="GeneID" id="66575838"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4491"/>
    <dbReference type="eggNOG" id="ENOG503238Z">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1957414_0_0_9"/>
    <dbReference type="OrthoDB" id="1770836at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58454.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="128" mass="14664" checksum="F270ACBB0F2E87F0" modified="2015-05-27" version="2">MHHLGARIMIVADAFEQNLPVGEHGYIIAYDRNADNAFDYVIRVPKVNRNFFVPSGDIELEESILKLEAERIEREALIDYALATHNEKLFRHVMNGGHDSVETEEEETAAELLSQADFIKQVNLRAWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBL2</accession>
    <name>E3EBL2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11 12">Protein translocase subunit SecA</fullName>
            <ecNumber evidence="11">7.4.2.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">secA</name>
        <name evidence="17" type="synonym">secA3</name>
        <name evidence="17" type="ORF">PPSC2_22950</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell membrane</location>
            <topology evidence="11">Peripheral membrane protein</topology>
            <orientation evidence="11">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="11">Distribution is 50-50.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 11 12">Belongs to the SecA family.</text>
    </comment>
    <dbReference type="EC" id="7.4.2.8" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373368.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10425"/>
    <dbReference type="EnsemblBacteria" id="ADO58830">
        <property type="protein sequence ID" value="ADO58830"/>
        <property type="gene ID" value="PPSC2_22950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4860"/>
    <dbReference type="eggNOG" id="COG0653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005314_3_0_9"/>
    <dbReference type="OMA" id="MVHYDVQ"/>
    <dbReference type="OrthoDB" id="212453at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017038">
        <property type="term" value="P:protein import"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd18803">
        <property type="entry name" value="SF2_C_secA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01382">
        <property type="entry name" value="SecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000185">
        <property type="entry name" value="SecA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020937">
        <property type="entry name" value="SecA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011115">
        <property type="entry name" value="SecA_DEAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014018">
        <property type="entry name" value="SecA_motor_DEAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011130">
        <property type="entry name" value="SecA_preprotein_X-link_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044722">
        <property type="entry name" value="SecA_SF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011116">
        <property type="entry name" value="SecA_Wing/Scaffold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036266">
        <property type="entry name" value="SecA_Wing/Scaffold_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036670">
        <property type="entry name" value="SecA_X-link_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30612">
        <property type="entry name" value="PTHR30612"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07517">
        <property type="entry name" value="SecA_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01043">
        <property type="entry name" value="SecA_PP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07516">
        <property type="entry name" value="SecA_SW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00906">
        <property type="entry name" value="SECA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00957">
        <property type="entry name" value="SecA_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00958">
        <property type="entry name" value="SecA_PP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81767">
        <property type="entry name" value="SSF81767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81886">
        <property type="entry name" value="SSF81886"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00963">
        <property type="entry name" value="secA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01312">
        <property type="entry name" value="SECA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51196">
        <property type="entry name" value="SECA_MOTOR_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 11 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 11 12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-1278">Translocase</keyword>
    <keyword evidence="9 11 12" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 11 12" id="KW-0813">Transport</keyword>
    <feature type="domain" description="SECA_MOTOR_DEAD" evidence="16">
        <location>
            <begin position="2"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="14">
        <location>
            <begin position="88"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="15">
        <location>
            <begin position="411"/>
            <end position="587"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="784"/>
            <end position="816"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="104"/>
            <end position="108"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="493"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO58830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="816" mass="92748" checksum="EECBF6E3E33F61EF" modified="2011-01-11" version="1">MLGIVKKIFGDTNERDVKRLMKTVELINKIEPDFEKLSDEELKAKTAEFRERIEQGATAEEVLPEAFATVREASKRVLGKRHYDVQMLGGIALHEGKIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSGEMGQIYNFLGMTVGLNLANMDHAAKQEAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQRPLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKSLNVEEDYTLDIKVKSVALTENGVSKAENFFGLENLYDQESVTINHHIVQALKANAIMRLDVDYVVADGEVLIVDEFTGRLMAGRRYSDGLHQAIEAKENIIVQNESMTLATITFQNYFRMYRKLAGMTGTAKTEEEEFKKIYGLEVLQIPTNKPNQRVDMPDVVYKSVKGKFHAVVDEILERNKKNQPILVGTVSIENSELLSEMLKRKGVRHKVLNAKYHAEEAEIISRAGEAGAVTIATNMAGRGTDIVLGEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGADNVLNMMERLGFEEDQPIESRMISRAIESAQKRVEGNNFDQRKVVLQYDDVMNQQRAIIYKQRREVLESENIKEIVFDMIKPVIERVVEAHCGDDIPENWELDEVAEYVNNNLLEENTLSRDDLWGKEKEEMVDMIFEKVTNRYHSREEMIGEEMVREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFHAMIASIQEEVATYIMKAQIESNQERQAVVDEDKISTSGEPAAPKKKSAPSRPRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBP5</accession>
    <name>E3EBP5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">degU</name>
        <name evidence="7" type="ORF">PPSC2_23095</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373401.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EBP5"/>
    <dbReference type="STRING" id="1406.LK13_10580"/>
    <dbReference type="EnsemblBacteria" id="ADO58863">
        <property type="protein sequence ID" value="ADO58863"/>
        <property type="gene ID" value="PPSC2_23095"/>
    </dbReference>
    <dbReference type="GeneID" id="66575454"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4892"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_90_10_9"/>
    <dbReference type="OMA" id="HPMWRDG"/>
    <dbReference type="OrthoDB" id="930905at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="12"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="5">
        <location>
            <begin position="171"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="240" mass="27199" checksum="96F59F8EDBD08A07" modified="2011-01-11" version="1">MENQEMSNAPIKVLLADDHQLFREGLKRILNMEDDIEVIGECGDGIQVLEFCNVEKPDIVLMDINMPIENGVEATEKLREMFPDVKVIILSIHDDESYVFETLRKGANGYLLKDMEAESLINAIRSVHEGYAFIHPKVTGKLIQQLRRMTYLNETGAMAEGHTKEAGVKFVAGENNPLTRREAEVLRLMAEGKSNKMIGEYLFISEKTVKNHVSSILQKMEVDDRTQAVINSIKYGWVTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBV5</accession>
    <name>E3EBV5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ketohydroxyglutarate aldolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">kdgA</name>
        <name evidence="2" type="ORF">PPSC2_24100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the KHG/KDPG aldolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373614.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11605"/>
    <dbReference type="EnsemblBacteria" id="ADO59079">
        <property type="protein sequence ID" value="ADO59079"/>
        <property type="gene ID" value="PPSC2_24100"/>
    </dbReference>
    <dbReference type="GeneID" id="66575250"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5102"/>
    <dbReference type="eggNOG" id="COG0800">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077795_2_0_9"/>
    <dbReference type="OMA" id="FFPAEYC"/>
    <dbReference type="OrthoDB" id="1497385at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00452">
        <property type="entry name" value="KDPG_aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000887">
        <property type="entry name" value="Aldlse_KDPG_KHG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30246">
        <property type="entry name" value="PTHR30246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01081">
        <property type="entry name" value="Aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01182">
        <property type="entry name" value="eda"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="214" mass="23156" checksum="6235D0B664533672" modified="2011-01-11" version="1">MTKKKVLEHITSVGVVAVIRGNTAEEAYQMSKACIEGGLDNIELTFTTPDADQVIRRLRDEFKDRAVIGAGTVLESLTARIAILAGAEFVVSPSFEEETAKLCNLYAIPYMPGCMTLNEIKEAMKLGSDVVKLFPGNTMGADFVKAVRGPMPHVQIMPTGGVDLDNMETWLRNGCVAVGIGGNLTAPAKEGRYDLITENAARYVAKYKEVRAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC17</accession>
    <name>E3EC17_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fbf1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fbf1</name>
        <name evidence="3" type="ORF">PPSC2_25350</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373890.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12845"/>
    <dbReference type="EnsemblBacteria" id="ADO59357">
        <property type="protein sequence ID" value="ADO59357"/>
        <property type="gene ID" value="PPSC2_25350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5373"/>
    <dbReference type="eggNOG" id="ENOG5032XC5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100573_0_0_9"/>
    <dbReference type="OMA" id="QFNIQLD"/>
    <dbReference type="OrthoDB" id="1824436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169060" evidence="2">
        <location>
            <begin position="32"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="99"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="23290" checksum="DE2376AA5A010176" modified="2011-01-11" version="1">MRWLGWLLKKGMTVVLVSALTLAVTGVVVNAYVQSLLRQFNIQLDHQPTWGWSWLKGSAGTDQSTGTGKSKTTGSDSGGVTPPDNALPVMGQGLEESGREAGGSSNGTVSQEGATSAGTSGSESRQQAEGTATPETSIEGHDLVITPDHLTEKKNNLPAAQKQEIFTILMSKLPPEEMQKISAAMEGGLTEQELQDIQQVLAKYLTKEEYNKLMGMLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECA1</accession>
    <name>E3ECA1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-393</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-393</name>
        <name evidence="1" type="ORF">PPSC2_01280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368886.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14005"/>
    <dbReference type="EnsemblBacteria" id="ADO54244">
        <property type="protein sequence ID" value="ADO54244"/>
        <property type="gene ID" value="PPSC2_01280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.252"/>
    <dbReference type="eggNOG" id="ENOG50324GI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_126447_1_0_9"/>
    <dbReference type="OMA" id="IENESMF"/>
    <dbReference type="OrthoDB" id="2001365at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="20077" checksum="4AB0AFC3F7836C9F" modified="2011-01-11" version="1">MIDERVKHRVEPAALSPLQVEEILTEAEGEQQQDDPLFLAVHTDPRTVYPDFLEFPLPLVSDRLKVLLEKYMPGLKWKAAILTDFQQARQEVYWVLRPPLVDCLSAQTEWYPSGTLKHLILRQGEIEPPVFRIEGLIEPHIYIHLAVAESLLRRSFTGIRVQRVEMEALRRMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECB3</accession>
    <name>E3ECB3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YdjI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydjI</name>
        <name evidence="3" type="ORF">PPSC2_01345</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368898.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14065"/>
    <dbReference type="EnsemblBacteria" id="ADO54256">
        <property type="protein sequence ID" value="ADO54256"/>
        <property type="gene ID" value="PPSC2_01345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.266"/>
    <dbReference type="eggNOG" id="COG4260">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037108_1_0_9"/>
    <dbReference type="OMA" id="AEVYFVN"/>
    <dbReference type="OrthoDB" id="886332at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd03408">
        <property type="entry name" value="SPFH_like_u1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033880">
        <property type="entry name" value="SPFH_YdjI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13421">
        <property type="entry name" value="Band_7_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Band_7_1" evidence="2">
        <location>
            <begin position="27"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="279"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="279"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="36723" checksum="9CB09EFAA32430D2" modified="2011-01-11" version="1">MGFFRNQFGNVVEWEEFRDDMIFWKWSNREIKKGSKLIIRSGQDAIFVNNGKIEGIFENEGSYNMDSDIIPFLSTLKGFKFGFNSGMRVEVLFVNTKEFTVKWGTQNPVLIPTPQLPGGMPIRANGTFNFKVNDYVTLIDKIAGVKDSYLVEDVKIRITSVLDQLLMKWISREGKDMFNLQANASDISKGIQEDLDMQVMDKGMTITGFHVMSFNYPQEIQDMITKTASHEMIGNLQKYQQVTMTDGIASGNVKGGGAASDMASMMMGMNIANEMMKNLNPSQKSPAETQPASDAPTPSGEGKRPNFCPNCGTKNEGANFCPNCGQKLNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECF4</accession>
    <name>E3ECF4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YwlC1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywlC1</name>
        <name evidence="2" type="ORF">PPSC2_01545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368939.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0313"/>
    <dbReference type="EnsemblBacteria" id="ADO54297">
        <property type="protein sequence ID" value="ADO54297"/>
        <property type="gene ID" value="PPSC2_01545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.307"/>
    <dbReference type="eggNOG" id="COG2318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107587_0_0_9"/>
    <dbReference type="OMA" id="ADHNAYH"/>
    <dbReference type="OrthoDB" id="1717097at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024775">
        <property type="entry name" value="DinB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12867">
        <property type="entry name" value="DinB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DinB_2" evidence="1">
        <location>
            <begin position="27"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18499" checksum="893C16E3EB459DCD" modified="2011-01-11" version="1">MSDANQLFAQALVKSLVGERGHIRMARALPDIDVELAGKKNAEMPYSIYQLLKHMIYWQQFMLEHLEGRKPQLPGNVMESWPEETGPQSEEAWQAVINEFLQGVDRAVQIAETAQLDELLAHFPGETKAGLLRNIASHNSYHLGEIVLLRRIYGAWPPPGGGFPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECG5</accession>
    <name>E3ECG5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fhuB1</name>
        <name evidence="8" type="ORF">PPSC2_01590</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368950.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0324"/>
    <dbReference type="EnsemblBacteria" id="ADO54308">
        <property type="protein sequence ID" value="ADO54308"/>
        <property type="gene ID" value="PPSC2_01590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.318"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_0_3_9"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="85"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="115"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="140"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="172"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="217"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="242"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="282"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="309"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="342" mass="36979" checksum="4E3F618E11B99849" modified="2011-01-11" version="1">MSEQEIHRSECGGGTIVAEPNAVSPRPQRIVLTLVAGLALLIFSFFLSLITGIFPISYAELWEVLFSSNPDPILKEVVYQTRMPFALDMLLLGGCLAVSGTLLQLRTANGFASPTLTGLMPGAMTGLCVVLLLGLDIDSFGSMALCIAGAVFGGFIVFKLNRIRFIRGRSAGIHLFMIGFIMDVALRSISGFIVLLGENQQEWAISVGGWGIREGSFTFWLALVTLLVAGSVSAFPKQLRPLYIPFAMVLTAATVWACGAIGYIGLIVPYFMRCMIGNRPRLLILGSILWGGGLLMLAKVISARINEPVGLPLTPVLACVGIPFLVFMVRGEWKRSSLLEKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECI4</accession>
    <name>E3ECI4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhaH</name>
        <name evidence="2" type="ORF">PPSC2_01680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368969.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0343"/>
    <dbReference type="EnsemblBacteria" id="ADO54327">
        <property type="protein sequence ID" value="ADO54327"/>
        <property type="gene ID" value="PPSC2_01680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.336"/>
    <dbReference type="eggNOG" id="COG3152">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_093674_4_1_9"/>
    <dbReference type="OMA" id="WMFTLFN"/>
    <dbReference type="OrthoDB" id="1961299at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008523">
        <property type="entry name" value="DUF805"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34980">
        <property type="entry name" value="PTHR34980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05656">
        <property type="entry name" value="DUF805"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12946" checksum="F78BCB7C7BB0C816" modified="2011-01-11" version="1">MQWYLKVLQNYVGFQGRARRTEYWMFTLFNAIAGLVLYLLDFLLGLPFVLSFIYGLAVLLPSLAVLFRRLHDTGKTGWWILIALVPFGSIVLLVFTCLDSQPGDNKYGQNPKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECJ4</accession>
    <name>E3ECJ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Multidrug ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">potA1</name>
        <name evidence="5" type="ORF">PPSC2_01725</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368977.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14515"/>
    <dbReference type="EnsemblBacteria" id="ADO54337">
        <property type="protein sequence ID" value="ADO54337"/>
        <property type="gene ID" value="PPSC2_01725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.346"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="DRARWYP"/>
    <dbReference type="OrthoDB" id="1926714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="26746" checksum="3E5930D927304C4F" modified="2011-01-11" version="1">MTESVVTAKKLIKQYGNKKALDQLDVVIPTGRIVGVLGPNGCGKSSFFRAITGLIQPDGGELQVLGQQPGWETNRNISYLPDRARWYPNHTVQQTLEWGKSFLPGFNIEDAYKLADHMDVELELKMAGLSRGQEARVLLILCLAREVPLMILDEPFVGIDVLSREAIVAGIIDYLEDRQQSILISTHDIQEVEGLFDYTVMMDRGRVIWSGESDDLRAEHGSLNQVFRNLYKREWKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS0</accession>
    <name>E3ECS0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">phoP1</name>
        <name evidence="9" type="ORF">PPSC2_01855</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54364.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599406.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14620"/>
    <dbReference type="EnsemblBacteria" id="ADO54364">
        <property type="protein sequence ID" value="ADO54364"/>
        <property type="gene ID" value="PPSC2_01855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.373"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_1_9"/>
    <dbReference type="OrthoDB" id="1020672at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="8"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="130"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="130"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54364.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="228" mass="26248" checksum="783297887FC5C633" modified="2015-05-27" version="2">MNPIHGVKIMLADDEPHILQFLELGLINEGYEVRTAENGSDALDLAREFRPHVAVLDVMMPEMNGFEVCQSLKETEDNIAVIMLTAKDDVDDRVKGLKLGADDYIVKPFSFNELLARIEARLRNQFPDLLGEVVHGPFQVDDRRKEIRYQSQVLELSPTEYELLKFLVLNHGIVLSKSRILDRVWGYDFGGEDNIVEVYIRSLREKLKDKEHRVIRTLRGVGYRVDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECW1</accession>
    <name>E3ECW1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Universal stress protein UspA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">uspA3</name>
        <name evidence="3" type="ORF">PPSC2_04200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal stress protein A family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369465.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17020"/>
    <dbReference type="EnsemblBacteria" id="ADO54830">
        <property type="protein sequence ID" value="ADO54830"/>
        <property type="gene ID" value="PPSC2_04200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.836"/>
    <dbReference type="eggNOG" id="COG0589">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049301_16_2_9"/>
    <dbReference type="OMA" id="MIYEDRT"/>
    <dbReference type="OrthoDB" id="2040681at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="4"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="15502" checksum="CBA0C903DA129AEF" modified="2011-01-11" version="1">MLFSKVLLAYDGSDASNKALLKAAELVKASPSSKLEVVTAFDFPRIFMGEGLAPIPASVNKEYYDLAEQTTDEVKKRLAEQGVDAKVELIQGSPAEVILDYANENGFDVIVIGSRGLGGIREFVLGSVSHNVVQHARIPVLVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECY3</accession>
    <name>E3ECY3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peroxiredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhfA</name>
        <name evidence="2" type="ORF">PPSC2_04295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the OsmC/Ohr family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369486.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0869"/>
    <dbReference type="EnsemblBacteria" id="ADO54852">
        <property type="protein sequence ID" value="ADO54852"/>
        <property type="gene ID" value="PPSC2_04295"/>
    </dbReference>
    <dbReference type="GeneID" id="66574119"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.856"/>
    <dbReference type="eggNOG" id="COG1765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114057_1_0_9"/>
    <dbReference type="OMA" id="GPRPMEM"/>
    <dbReference type="OrthoDB" id="1430018at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="15363" checksum="D9333058FA6D3692" modified="2011-01-11" version="1">MKVSTTWHGKRAFTSEGPSGYSVGMDATAAYGGDGKGMTPMELLLAGLAGCIGIDITMILDRFLSDIQRIDIDAEGTRKEQMPTGFTAIDLTFHVDGDIPDYRVWKAIQMGKEKYCAVSDSLKAEIRMHLILNGTEVPYPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED65</accession>
    <name>E3ED65_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Response regulator receiver protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">M1-574</name>
        <name evidence="7" type="ORF">PPSC2_02265</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369062.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0438"/>
    <dbReference type="EnsemblBacteria" id="ADO54422">
        <property type="protein sequence ID" value="ADO54422"/>
        <property type="gene ID" value="PPSC2_02265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.430"/>
    <dbReference type="eggNOG" id="COG3947">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_14_3_9"/>
    <dbReference type="OMA" id="ICIPETD"/>
    <dbReference type="OrthoDB" id="1958442at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005158">
        <property type="entry name" value="BTAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03704">
        <property type="entry name" value="BTAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01043">
        <property type="entry name" value="BTAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="9"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="45443" checksum="414C0D31DC364E16" modified="2011-01-11" version="1">MERSEILTRIVIVDDEELALDYMKRLLGELQGIHIAGAFTNPFVAKDYILLDDIDIAFLDVRLPGISGIELAHQILEHKPHIQIVFVTAYDKYAIQAFELNALDYLLKPVTTERLIKTMNRILKRDDQAASMPENQPSVLQLQVFQYVVFTLPDQQPTVIQWRTKKTQELFLYLLQNHDQWVRKSALIELLWPEYEEDKAYSLLYTAAYYIRKTIAPYHSFLEISNTNGGYILHTQNVLLDTERWESLLASAPQMNKESIPYYVKMMELYKGDYLQEYDFWWVESERQRLHKMWLSVSLKMAEWYRGNSQPEEAISIYEGICSRHPQEEEAYWGLMKTYAEMYKNSLVIKWYDLLSSVLWEELHEKPNEQITNWFKEWQMAHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDX3</accession>
    <name>E3EDX3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spore cortex biosynthesis protein YabQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yabQ</name>
        <name evidence="2" type="ORF">PPSC2_00250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368686.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13265"/>
    <dbReference type="EnsemblBacteria" id="ADO54039">
        <property type="protein sequence ID" value="ADO54039"/>
        <property type="gene ID" value="PPSC2_00250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.49"/>
    <dbReference type="eggNOG" id="ENOG5032RAH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113225_0_0_9"/>
    <dbReference type="OMA" id="LFWIVQG"/>
    <dbReference type="OrthoDB" id="2074180at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014242">
        <property type="entry name" value="Spore_cortex_biosyn_YabQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019074">
        <property type="entry name" value="YabQ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09578">
        <property type="entry name" value="Spore_YabQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02893">
        <property type="entry name" value="spore_yabQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="134"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="192" mass="22800" checksum="32B8F9BE36DC7F34" modified="2011-01-11" version="1">MNPYTQWLTLTWMLLSGITMGVVFDSYRVLSIRFHFARWSVHLLDVLYWVASALFIFRVLYASNRGELRFYVFLGLLLGVWLYFWAFSVTTQRFVVMLIEIVRRLTLIVNSILRILIVLPVLALYRLLRKLVGWTWALIVLLGRMLIYILMPVWKPILWSIRPLIARWKTPDPLVKLGIRLKNTAKRWFGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE00</accession>
    <name>E3EE00_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Disulfide oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dsbB</name>
        <name evidence="7" type="ORF">PPSC2_02625</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DsbB family. BdbC subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369120.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15390"/>
    <dbReference type="EnsemblBacteria" id="ADO54480">
        <property type="protein sequence ID" value="ADO54480"/>
        <property type="gene ID" value="PPSC2_02625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.489"/>
    <dbReference type="eggNOG" id="COG1495">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_128688_0_0_9"/>
    <dbReference type="OMA" id="INWFGFI"/>
    <dbReference type="OrthoDB" id="1859420at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00287">
        <property type="entry name" value="BdbC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003752">
        <property type="entry name" value="DiS_bond_form_DsbB/BdbC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012187">
        <property type="entry name" value="Disulphide_bond_form_BdbC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023380">
        <property type="entry name" value="DsbB-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43469">
        <property type="entry name" value="PTHR43469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02600">
        <property type="entry name" value="DsbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036659">
        <property type="entry name" value="BdbC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158442">
        <property type="entry name" value="SSF158442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="120"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17521" checksum="80F0841EBC9A4C58" modified="2011-01-11" version="1">MIGSFKKTDIALFAAWVVACVATLGSLYLSEILGYEPCKLCWFQRILMYPLTLLLGIAYFRGDTKIRIYVMPLAVIGGAISAYHFIIQRIHAAAKAATQTSTACGRVSCEQDYLNWLDFITIPFLALIAFILIIAAMVYIMRQEKKSAAGEVQAQELA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE11</accession>
    <name>E3EE11_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Bifunctional NAD(P)H-hydrate repair enzyme</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">Nicotinamide nucleotide repair protein</fullName>
        </alternativeName>
        <domain>
            <recommendedName>
                <fullName evidence="16">ADP-dependent (S)-NAD(P)H-hydrate dehydratase</fullName>
                <ecNumber evidence="16">4.2.1.136</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="16">ADP-dependent NAD(P)HX dehydratase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="16">NAD(P)H-hydrate epimerase</fullName>
                <ecNumber evidence="16">5.1.99.6</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="19" type="primary">yjeF</name>
        <name evidence="14" type="synonym">nnrD</name>
        <name evidence="15" type="synonym">nnrE</name>
        <name evidence="19" type="ORF">PPSC2_02680</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13 16">Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.</text>
    </comment>
    <comment type="function">
        <text evidence="14">Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.</text>
    </comment>
    <comment type="function">
        <text evidence="15">Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15 16">
            <text>(6R)-NADHX = (6S)-NADHX</text>
            <dbReference type="Rhea" id="RHEA:32215"/>
            <dbReference type="ChEBI" id="CHEBI:64074"/>
            <dbReference type="ChEBI" id="CHEBI:64075"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 15 16">
            <text>(6R)-NADPHX = (6S)-NADPHX</text>
            <dbReference type="Rhea" id="RHEA:32227"/>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
            <dbReference type="ChEBI" id="CHEBI:64077"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 14 16">
            <text>(6S)-NADHX + ADP = AMP + H(+) + NADH + phosphate</text>
            <dbReference type="Rhea" id="RHEA:32223"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:64074"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="4.2.1.136"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 14 16">
            <text>(6S)-NADPHX + ADP = AMP + H(+) + NADPH + phosphate</text>
            <dbReference type="Rhea" id="RHEA:32235"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="4.2.1.136"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 16">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="15 16">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="14">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="14">Belongs to the NnrD/CARKD family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="15">Belongs to the NnrE/AIBP family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 16">In the C-terminal section; belongs to the NnrD/CARKD family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 16">In the N-terminal section; belongs to the NnrE/AIBP family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.136" evidence="16"/>
    <dbReference type="EC" id="5.1.99.6" evidence="16"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369131.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15445"/>
    <dbReference type="EnsemblBacteria" id="ADO54491">
        <property type="protein sequence ID" value="ADO54491"/>
        <property type="gene ID" value="PPSC2_02680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.500"/>
    <dbReference type="eggNOG" id="COG0062">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0063">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024853_4_1_9"/>
    <dbReference type="OMA" id="HNGGDAL"/>
    <dbReference type="OrthoDB" id="1748633at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052855">
        <property type="term" value="F:ADP-dependent NAD(P)H-hydrate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052856">
        <property type="term" value="F:NADHX epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052857">
        <property type="term" value="F:NADPHX epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046496">
        <property type="term" value="P:nicotinamide nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01171">
        <property type="entry name" value="YXKO-related"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <sequence length="546" mass="56829" checksum="81652D7CF53996CE" modified="2011-01-11" version="1">MYMVTAEQMRQLDRYTIDKLGIPALTLMENAGRAVADEVLKLCAERRGKSGGINEVTHTGAGDVPEHGSVIRTDSSSRGRYDVCERAHWYILVGKGNNGGDGLVAARHLTDAGLRVTVVYAEPPETLRGEVAAQRDIIAALDIPVILYGWDNLELHGASGIVDALLGTGTQGPPREPYASLIREANASGAPIVSVDVPSGLDADTGALHEPCIHARVTVCLAYLKCGLAQYPGAGNAGDVVVRYIGIPPSLAREHGVQLQLLTSATLRDALDVDVSRSRVPDGHKGTYGHVLVAAGSLRMSGAGLLAARAALRIGSGLVTWAVPEALLPRVIGAAPELMLAAAATGGDGEWNADSAAELLQLAQARDVLAVGPGLGRFAGDTGWLRRLWEEYSGPLVLDADALNILASAELDAWKSRDAAVVLTPHPGEMARLLGIPTAEVQRDRISHAREYARTRGVTLVLKGARTVIACPDGNAYVNTTGHAGMATGGAGDVLTGIIAGLLAQGLNASQAAAFGVYLHGAAGETAARQRQHPASVVAGDIIEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE85</accession>
    <name>E3EE85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">tRNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">metRS</name>
        <name evidence="5" type="ORF">PPSC2_05020</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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        <property type="gene ID" value="PPSC2_05020"/>
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    <dbReference type="KEGG" id="ppm:PPSC2_05020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1013"/>
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        <property type="taxonomic scope" value="Bacteria"/>
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    <dbReference type="HOGENOM" id="CLU_065946_2_1_9"/>
    <dbReference type="OMA" id="FPEARNP"/>
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        <property type="component" value="Chromosome"/>
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    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="entry name" value="CsaA"/>
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    <proteinExistence type="predicted"/>
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    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
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        <location>
            <begin position="6"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
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        <source>
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    <sequence length="110" mass="11918" checksum="5735328C025AE33C" modified="2011-01-11" version="1">MATIDDFLKLDIRVGTIIKAEFFAEAKVPAIKLEIDFGQDIGIKTSSAQITKRYVAEEIIGEQIIAVVNFPPRRIAGFNSEVLVLGGIPEKGDVVLLKPDIKLPDGTPIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE88</accession>
    <name>E3EE88_PAEPS</name>
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        <submittedName>
            <fullName evidence="5">Alcohol dehydrogenase</fullName>
        </submittedName>
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        <name evidence="5" type="primary">adhC1</name>
        <name evidence="5" type="ORF">PPSC2_05035</name>
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        <lineage>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
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        <property type="protein sequence ID" value="ADO55011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="ADO55011"/>
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    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1016"/>
    <dbReference type="eggNOG" id="COG1064">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026673_20_2_9"/>
    <dbReference type="OMA" id="LPWIQKR"/>
    <dbReference type="OrthoDB" id="969875at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="4">
        <location>
            <begin position="14"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="349" mass="37648" checksum="D8EB7F91B1099BB2" modified="2011-01-11" version="1">MITTNARATFSPEGPFKLTTIERRDLQPHDVLIEIKYAGICHSDIHTARGEWGPVNYPLVPGHEIAGIVTQVGSEVRKFAIGDRVGVGCMVDSCGECVNCHQGEEQYCLNGNTGTYGAYDRYGQYTQGGYSSHIVVTEDFVVSIPDGIELDVAAPLLCAGITTYSPLRHWGAAPGKKIAVVGLGGLGHMAVKLAHAMGAEVTVLSQTLNKKEDGLRLGADHYYATNDPETFKKLAGSFDLIVNTVSAKIDINAYLSLLALDGTLVNVGAPAEPLPVQVLSLIGHRRSFAGSMIGGIRGTQEMLNFCAEHSITPEIEVISANQIDEAWERVLASDIRYRFVIDISTMENE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEG9</accession>
    <name>E3EEG9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Methyltransferase type 11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370051.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19885"/>
    <dbReference type="EnsemblBacteria" id="ADO55420">
        <property type="protein sequence ID" value="ADO55420"/>
        <property type="gene ID" value="PPSC2_06915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1426"/>
    <dbReference type="eggNOG" id="COG0500">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_885195_0_0_9"/>
    <dbReference type="OMA" id="DGNIHEY"/>
    <dbReference type="OrthoDB" id="1558128at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="36563" checksum="55D6A6C8E07DDFE2" modified="2011-01-11" version="1">MTVAQLHNLINGQLLHNQHRSLFYMREGSVLLGPSTEMTYWLTQRSSELILMLQSLKRQHTYHVFVKDVAAKILSQFVNTNQYLHFHTDHARELTELYDRFFTRIEKLFQKKSIAGATLDLLLQQHYGHLRDFLTRTNGREVFAKYAENEYTFWVPCEEYTPELQANLLGLDIARLQEPVLDVGCGSEARLVTYLRAYGIEAYGTDRLAETDGCITQGDWLATTYEESRWGTIVSHMAFSNHFMHHHLKADGNIHEYARKYMELLKAIRPGGSFIYSPCLPFMEELLDAQMGYQVEYIQSYEGYRATKITRIHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN4</accession>
    <name>E3EEN4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Phosphate-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">pstS</name>
        <name evidence="13" type="ORF">PPSC2_08260</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Involved in the system for phosphate transport across the cytoplasmic membrane.</text>
    </comment>
    <comment type="function">
        <text evidence="1">Part of the ABC transporter complex PstSACB involved in phosphate import.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 11">The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cell membrane</location>
            <topology evidence="2 11">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the PstS family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370342.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20865"/>
    <dbReference type="EnsemblBacteria" id="ADO55721">
        <property type="protein sequence ID" value="ADO55721"/>
        <property type="gene ID" value="PPSC2_08260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1736"/>
    <dbReference type="eggNOG" id="COG0226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026228_5_0_9"/>
    <dbReference type="OMA" id="KMGYIPM"/>
    <dbReference type="OrthoDB" id="1222928at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042301">
        <property type="term" value="F:phosphate ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024370">
        <property type="entry name" value="PBP_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011862">
        <property type="entry name" value="Phos-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12849">
        <property type="entry name" value="PBP_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02136">
        <property type="entry name" value="ptsS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 11" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 11" id="KW-0564">Palmitate</keyword>
    <keyword evidence="7 11" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0732">Signal</keyword>
    <keyword evidence="6 11" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5027150190" description="Phosphate-binding protein" evidence="11">
        <location>
            <begin position="28"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_domain" evidence="12">
        <location>
            <begin position="40"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU367119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF12849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO55721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="32491" checksum="520EDC3C697A4141" modified="2011-01-11" version="1">MLKKWPFILMTLTMVFALAACGSGNNAAPQGDAAAGTDNKAAAELTGNILAVGSTALQPLVEQAGQKFMAVDKYKGIAVQVQGGGSGTGLTQVSGGQADIGNSDVFAKEKLESGAEELVDHQVAVVAMSAVANPKVGVTDLKKDQLVQIFTGKITNWKEVGGADQKIVIVNRPSSSGTRATFEKYALGQKTEDLPGSIQEDSSGTVKKLIAETPGAIGYLALSYIDNTVTALKYDGVEANVENVEQGKYPVWAYEHMYTKGEPKEHVKAFLDYILSDEIQKTDVVDLGYIPVSGMQVKRDADGNITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF91</accession>
    <name>E3EF91_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369687.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18155"/>
    <dbReference type="EnsemblBacteria" id="ADO55054">
        <property type="protein sequence ID" value="ADO55054"/>
        <property type="gene ID" value="PPSC2_05240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1062"/>
    <dbReference type="eggNOG" id="COG1277">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017352_1_0_9"/>
    <dbReference type="OMA" id="SAWYAIA"/>
    <dbReference type="OrthoDB" id="1099610at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="251"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="281"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="314"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="348"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="698" mass="79762" checksum="4728F5C46EB0A380" modified="2011-01-11" version="1">MTSNRFFCSGGVIRQCLRQHGWIGLLYLAGLLFTVPLSLFMSIGDEQPRVVLKSLFDSTSSGNELQKLILVTVPVLAGVMLLRFVQRQGPSDLYHSLPLRREHLLTAHLISGLILLLVPVWLTAGVTAWVNTSVELPYIFQINDVGSWALVVSVLTIFLFTFTVFVGICVGQSLLQTVVVYVLLLLPQFLFMMIGRFLERNLYGYVRVRETVVQYINGSEFRSNNNVWENLSPFVRIMDNLPQRAFSYMELLAYLGISLLFVALSYGLYRKRLVEKATQAIAFPFLQPLFKAGVILCAMLILGDYFNNAGTRGANWSIFGYALGAILGYIVVEMVIRKTWQIMRVRALVEMVVYGVIMGLVLYIPVSGWLGYEGRIPTAHSVEKVYVGREEPLGGDAEKEAYYSQDRAYITSVLNLHRELVRAHAAGEKMLSKNLAVESAFIVYRLDDGSTMTRRYTFPEKPFRTELTKVMEAEPYKTVRYELDKLQGKAETINIQSVDDSERRVVLTNPKETREFEDILREEVLNMSYSEMQSHRYPLGSVSITNKESSSTNNEPSWHREFSFEWPASYHKLTGWLEQKGYADKVIIDSKDIFSIRAVPIIAEELEPYQSNQYIEDYKLFKSIQQKHKAITIEDPKLWSTVLEKRRPYSYTPNMAKDTYLVQFKIKPLFSSDPHTRYCYLTPSDMTPELAKALPAVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFG8</accession>
    <name>E3EFG8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369764.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1151"/>
    <dbReference type="EnsemblBacteria" id="ADO55131">
        <property type="protein sequence ID" value="ADO55131"/>
        <property type="gene ID" value="PPSC2_05590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1137"/>
    <dbReference type="eggNOG" id="ENOG5030I1E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1089242_0_0_9"/>
    <dbReference type="OMA" id="GRHTIGM"/>
    <dbReference type="OrthoDB" id="857946at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="29302" checksum="1C11043CE29ACB30" modified="2011-01-11" version="1">MVKSMLNVTYTWDRESISANGSKQVNLLIEWGYGAIRKRKGNLIPKAAGCDLQLQFNPENGVNLLKVEGVRLGFKESENGDCMFVHCGDVWRGKYRQAILTFSIPAHASGRHTIGMIEWSWRKPSQEKRTLIRTDQLYIHYTHHLGLLSMPSNPKVEKYIKLNETSPIVKKALRMYEKGEPERGAFILTRQADELLICAARSEDMDYLEEAELLLSLRNKWSGPFVSFKAYSSKVFFNKEISIGDVHFTENDRLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG29</accession>
    <name>E3EG29_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Flagellar biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fliH</name>
        <name evidence="4" type="ORF">PPSC2_09865</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370675.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22335"/>
    <dbReference type="EnsemblBacteria" id="ADO56062">
        <property type="protein sequence ID" value="ADO56062"/>
        <property type="gene ID" value="PPSC2_09865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2079"/>
    <dbReference type="eggNOG" id="COG1317">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062625_1_0_9"/>
    <dbReference type="OMA" id="CIIETDF"/>
    <dbReference type="OrthoDB" id="1285795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018035">
        <property type="entry name" value="Flagellar_FliH/T3SS_HrpE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02108">
        <property type="entry name" value="FliH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="FliH" evidence="3">
        <location>
            <begin position="132"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="54"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="32223" checksum="4220D3272C04F785" modified="2011-01-11" version="1">MSNLIKSFQYVPVEALKTIDVAHTYVPETTDEEITTEYTEPEPQRDYEAERLRDEMLNDAKDFAERQVREAAEEAERMLQEAQQQIEDWWQERREHDDQLIQSIKADGFQQGYEEGQKLAEAELQTKSEQMMEEAQDILRQAYEIKEQLIQEAEPFLVELSSAIAEKVIEKQLSLEPEYTIELIRKNLARKREKGIITLCVSPQHFAFVQGAREELSLTVDSQAELQIIPDGTVKDRGCVIRSSFGSVDARIDTQLAEIKKELLRLAHENEERRHEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG46</accession>
    <name>E3EG46_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">Flagellar biosynthetic protein FlhB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 13" type="primary">flhB</name>
        <name evidence="13" type="ORF">PPSC2_09950</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the type III secretion exporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370690.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22420"/>
    <dbReference type="MEROPS" id="N06.A01"/>
    <dbReference type="EnsemblBacteria" id="ADO56079">
        <property type="protein sequence ID" value="ADO56079"/>
        <property type="gene ID" value="PPSC2_09950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2096"/>
    <dbReference type="eggNOG" id="COG1377">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041013_1_2_9"/>
    <dbReference type="OMA" id="DEYKQQE"/>
    <dbReference type="OrthoDB" id="1424100at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1690.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006136">
        <property type="entry name" value="FlhB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006135">
        <property type="entry name" value="T3SS_substrate_exporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029025">
        <property type="entry name" value="T3SS_substrate_exporter_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30531">
        <property type="entry name" value="PTHR30531"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01312">
        <property type="entry name" value="Bac_export_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00950">
        <property type="entry name" value="TYPE3IMSPROT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160544">
        <property type="entry name" value="SSF160544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00328">
        <property type="entry name" value="flhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 12" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="11 12" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="5 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13" id="KW-0966">Cell projection</keyword>
    <keyword evidence="13" id="KW-0969">Cilium</keyword>
    <keyword evidence="13" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="200"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU364091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO56079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="370" mass="41738" checksum="433298F8F96BFE94" modified="2011-01-11" version="1">MSGLEERSLSFKYAMNLQLFSGEKTEKATPKKKQDARQKGQVAKSMELPAAGVLLVTFFCLMIFGGYFKDHAVRLFRDIFVNRLSMEVTPNTTLLMMGEYGVQILIMLAPIFVGAIVIGIAANYMQIGFLLTGEGITPKFSKIDPIKGFKNIFSMRSLVEFLKSVLKMTVIGYLVYSVLWKTKADLPKLAEMSGDQMLSFTASLTMELGLKIGVVLFILAILDYMYQRYEHEKNLKMSKQDIKDEYKKMEGDPLIKGKIRERQRRMAMQRMMQEVPNADVIITNPTHFAVALKYDGSEMEAPQIIAKGQDYVALRIKEIAKQSGVITMENKPLARALFQRAEIGDAIPADLFQAVAEVLAYVYKLKGKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG59</accession>
    <name>E3EG59_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tetratricopeptide repeat protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370858.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2280"/>
    <dbReference type="EnsemblBacteria" id="ADO56252">
        <property type="protein sequence ID" value="ADO56252"/>
        <property type="gene ID" value="PPSC2_10710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2268"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116756_1_0_9"/>
    <dbReference type="OMA" id="FRAMTLY"/>
    <dbReference type="OrthoDB" id="1486598at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041656">
        <property type="entry name" value="TPR_5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12688">
        <property type="entry name" value="TPR_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TPR_5" evidence="1">
        <location>
            <begin position="39"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="161" mass="18540" checksum="5E2F0D0C441EE0D8" modified="2011-01-11" version="1">MDHMIEKASQLRHTGQAKEARKLLLEALEQEPKDAELWYQTAWTHDSLGLEREAVPFYEKSLGMALSAESRRGAILGLSSTYRVLGEYHKAKAWLETGINEFSDYRPFRVFYAMVLYNLGEYGKAMEGLLMELAETTADISIQEYSRAIQYYADKLDQIEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG79</accession>
    <name>E3EG79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glucose-1-phosphate adenylyltransferase subunit GlgD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">glgD</name>
        <name evidence="3" type="ORF">PPSC2_10805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370878.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23200"/>
    <dbReference type="EnsemblBacteria" id="ADO56272">
        <property type="protein sequence ID" value="ADO56272"/>
        <property type="gene ID" value="PPSC2_10805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2289"/>
    <dbReference type="eggNOG" id="COG0448">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029499_14_0_9"/>
    <dbReference type="OMA" id="PRSLMDH"/>
    <dbReference type="OrthoDB" id="1557977at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008878">
        <property type="term" value="F:glucose-1-phosphate adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005978">
        <property type="term" value="P:glycogen biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011831">
        <property type="entry name" value="ADP-Glc_PPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011832">
        <property type="entry name" value="GlgDAde_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43523">
        <property type="entry name" value="PTHR43523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43523:SF6">
        <property type="entry name" value="PTHR43523:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02092">
        <property type="entry name" value="glgD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="2">
        <location>
            <begin position="16"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="42325" checksum="3866CC2232523184" modified="2011-01-11" version="1">MSRLIGVINLDHELDQLKELTYFRCGAAVPFASRYRLIDFTLSNMMHAGVHDIALFIRRKYRSLLDHLGEGRPWDLDRRRGGLFILPPDWNDPTDTSRGDLQHVHNNLDFFHRSSGQTIVHAGTQHINKVDIEDVYRYHLEKNADVTLVYKPIHQLETEHAPCVRLEIDESGRVTGIHQEQDHHNIYLEMFVMDKSLYLDQVKHCIAHQDSHFFRDAIQKNPSGLRIYAYRYDGYHAVINSIESYYKNSMKLLDQEQYQALFQNQPVHTKIKYEAPTRYTYSAEVDHSLVANGCTIGGKVENSILFRGVRVEEGARVSNSIIMQKCVIRKGAVVQNVVLDKDVQLSPDRTLIGDIRVPYVIAKNSVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG97</accession>
    <name>E3EG97_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">msbA1</name>
        <name evidence="10" type="ORF">PPSC2_12290</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371191.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2618"/>
    <dbReference type="EnsemblBacteria" id="ADO56587">
        <property type="protein sequence ID" value="ADO56587"/>
        <property type="gene ID" value="PPSC2_12290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2606"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="DMVVFMS"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="127"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="159"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="237"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="279"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="19"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="339"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="373"/>
            <end position="380"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="589" mass="65085" checksum="D9C4057ADDAA5C31" modified="2011-01-11" version="1">MLKIFKYLKKNEWMFVLCSLAFIVVQVWLDLKLPDYMAEITTKLQTAGTPMSELLIPGIYMLLCAVGSMIASIIVGYFAAKVAAGLAMRLRAMVFDKALSFSMEEMNSFSTASLITRSTNDVTQIQTVVALGLQVIIKAPILAVWAIAKIADKNWQWTASTGVAVAVLILMLSVIVIFALPSFQKIQRLTDNLNRVTREHLTGLRVVRAYNADQYQEEKFGQANAELTNTNLFANRLMAMVGPGMTFIMSGLSVSIYWIGTYLINGAAVPDRVTLFSNMVVFSSYAVQVVMAFMMVSMIFFLMPRASISAKRIMEVLNTESRIIDGHETAGEEGVMGQVEFRNVSFKYPDAEEPVLRNISFTAKQGETVAFIGATGSGKTSVINLISRFYDVTEGEVLVDGVNVRNYKQQTLHNKIGYVPQRAVLFSGTVASNVSYGDNGRAEVSEKLVKAAVEIAQGTEFVEKMDGQYQGRISQGGANVSGGQKQRLSIARAIYRQPEIYIFDDSFSALDYRTDRVLRSALKQETGHATTLIVAQRIGTIKDTDRIIVLDQGEIVGNGTHEELMANCSTYQEIAYSQLSKEELVHGQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGC7</accession>
    <name>E3EGC7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Imidazoleglycerol-phosphate dehydratase</fullName>
            <shortName evidence="5">IGPD</shortName>
            <ecNumber evidence="5 6">4.2.1.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">hisB</name>
        <name evidence="7" type="ORF">PPSC2_00860</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O</text>
            <dbReference type="Rhea" id="RHEA:11040"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57766"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="EC" id="4.2.1.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 5 6">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 6/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the imidazoleglycerol-phosphate dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.19" evidence="5 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368799.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13850"/>
    <dbReference type="EnsemblBacteria" id="ADO54155">
        <property type="protein sequence ID" value="ADO54155"/>
        <property type="gene ID" value="PPSC2_00860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.160"/>
    <dbReference type="eggNOG" id="COG0131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044308_3_0_9"/>
    <dbReference type="OMA" id="ARHGLFD"/>
    <dbReference type="OrthoDB" id="1278103at2"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004424">
        <property type="term" value="F:imidazoleglycerol-phosphate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07914">
        <property type="entry name" value="IGPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00076">
        <property type="entry name" value="HisB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038494">
        <property type="entry name" value="IGPD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000807">
        <property type="entry name" value="ImidazoleglycerolP_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020565">
        <property type="entry name" value="ImidazoleglycerP_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23133">
        <property type="entry name" value="PTHR23133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00475">
        <property type="entry name" value="IGPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00954">
        <property type="entry name" value="IGP_DEHYDRATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00955">
        <property type="entry name" value="IGP_DEHYDRATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="4 5 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="202" mass="22491" checksum="9766CE2B3475CEF8" modified="2011-01-11" version="1">MGNENNKAERTGSVSRKTNETDIQLSFAVDGTGQAEIETDVPFLNHMLDLFTKHGQFDLNVQARGDVDIDDHHTVEDIGICLGQTLLEALGDKKGIKRYASVFVPMDEALAQVVIDLSNRPHFEYRAEYPSQQVGSFSTELVHEFLWKFALEARMTLHVIVHYGQNTHHMIEAVFKALGRALDEATSIDPRVTGVPSTKGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGH4</accession>
    <name>E3EGH4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-763</name>
        <name evidence="2" type="ORF">PPSC2_03230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369250.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16040"/>
    <dbReference type="EnsemblBacteria" id="ADO54613">
        <property type="protein sequence ID" value="ADO54613"/>
        <property type="gene ID" value="PPSC2_03230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.619"/>
    <dbReference type="eggNOG" id="COG0491">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056342_1_0_9"/>
    <dbReference type="OMA" id="GWGLANC"/>
    <dbReference type="OrthoDB" id="775108at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="33"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="38898" checksum="4809A8083398CCA4" modified="2011-01-11" version="1">MKYGRIIQKPRVKFFEVANGVFAGISPYRGISWANAGFVNKGGGLVYDTFFDLFHAREMREAFKEVSNGGSPAYVVNSHYNSDHAWGNKVFEDACIIMHKEASRERLTENIAWMDSVIRRGKNSPESTSGERFFAAEFEGFDLEGVEWVLPNIEIKDDINIRLGDMEVMIYNVAPAHSDSDLLLWMPKEKVLFAGDVVFNGCTAYSEEGTLNWVKVLDRIIDEIKPEIVVPGHGAICGLDFVKEQRHYLLNLISEFNKHYNDEIDTLSLTKQIDISRFLHWIQPERLYVTVDILLKSKRGLPPLPIWNEVPAKLEDMKAFLAGKYGDQIKPWDPMCVWQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK4</accession>
    <name>E3EGK4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Endoglucanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">manA3</name>
        <name evidence="5" type="ORF">PPSC2_03345</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369280.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16140"/>
    <dbReference type="CAZy" id="GH5">
        <property type="family name" value="Glycoside Hydrolase Family 5"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54643">
        <property type="protein sequence ID" value="ADO54643"/>
        <property type="gene ID" value="PPSC2_03345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.653"/>
    <dbReference type="eggNOG" id="COG2730">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018488_2_0_9"/>
    <dbReference type="OMA" id="GTAPNGY"/>
    <dbReference type="OrthoDB" id="1395441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168906" evidence="3">
        <location>
            <begin position="32"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="Cellulase" evidence="4">
        <location>
            <begin position="44"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="35641" checksum="A85AC198241DB040" modified="2011-01-11" version="1">MNALLRKALLSGLAGLLIMIGLGGFFSKAQAASGFYVSGTNLYDSTGKPFVMRGVNHAHTWYKNDLYTAIPAIAKTGANTVRIVLSNGNQYTKDDINSVKNIISLVSNHKMIAVLEVHDATGKDDYASLDAAVNYWISIKDALIGKEDRVIVNIANEWYGSWNGGGWADGYKQAIPKLRNAGIKNTLIVDCAGWGQYPQSINDFGKSVFAADSLKNTVFSIHMYEFAGKDVQTVRTNIDNVLYQGLPLIIGEFGGYHQGADVDETEIMRYGQSKSVGWLAWSWYGNSSNLNYLDLVTGPNGNLTDWGRTVVEGANGIKETSKKAGIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGT4</accession>
    <name>E3EGT4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MerR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bltR</name>
        <name evidence="2" type="ORF">PPSC2_05740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369800.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1188"/>
    <dbReference type="EnsemblBacteria" id="ADO55168">
        <property type="protein sequence ID" value="ADO55168"/>
        <property type="gene ID" value="PPSC2_05740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1174"/>
    <dbReference type="eggNOG" id="COG0789">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4978">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065103_0_2_9"/>
    <dbReference type="OMA" id="ICGDAYE"/>
    <dbReference type="OrthoDB" id="1748122at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029442">
        <property type="entry name" value="GyrI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06445">
        <property type="entry name" value="GyrI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="32478" checksum="CC132C1164C0D317" modified="2011-01-11" version="1">MKNTFEKTYLTGEFAKLLEINKDTLLYYDKIDLFKPAGTFDNGYRYYTFEQFDQFVAIQSLRAVEVPIKELKTYFDAPNVQALQQLAMEQQEKVAMEIQKLQDIQFFLERTVALTKEMEEVSFGEVLMKQLPAEPVVYSDEKIDWSSLSMEELYEQTTPFLKKHGIKSTAAYGTVYTKEDFLNKKFEGVSYLCRLDDPSARMKPAGHYAVIYHQGPYDEISQTETYNTLLAYLEQEQLALDGDIYEEYLLHSIAAKEEKDYITKISVKVKTREASYQPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH76</accession>
    <name>E3EH76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tetraprenyl-beta-curcumene synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ytpB</name>
        <name evidence="1" type="ORF">PPSC2_08945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55867.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599633.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21410"/>
    <dbReference type="EnsemblBacteria" id="ADO55867">
        <property type="protein sequence ID" value="ADO55867"/>
        <property type="gene ID" value="PPSC2_08945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1885"/>
    <dbReference type="eggNOG" id="ENOG502Z812">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042799_0_0_9"/>
    <dbReference type="OrthoDB" id="649505at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019712">
        <property type="entry name" value="YtpB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10776">
        <property type="entry name" value="DUF2600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55867.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="359" mass="41069" checksum="199AC14C14694BDF" modified="2015-05-27" version="2">MSYVEQGRYQVPRGPIGLMSRMYKHILPETKQELSNWKSKAEQIPDPELRSQALASIAEKTFHCVGGAVYAAANMSDRQTLIPLIVAYQTISDYLDNLCDRSTSMDPDDFRLLHQSMLDAVNPAARPVNYYELRREQEDGGYLTGLVTTCQSCVSRLPGYEAAMPYVQDLARLYTDLQVYKHIKPELREQALLDWWSIHKDRTPELRWNEFAAATGSTLGVFMLFLAASDRHLTDAGAASIHASYFPHVCSLHILLDYLIDQDEDRKGGDLNFCNYYEDADMMLDRIAYVVNRARADIADVPASSFHRMIIEGLLALYLSDPKVSEQQDVRAVSRRLMKNSPLMRLFFLLNSRWIRRLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC7</accession>
    <name>E3EHC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_09185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370535.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1946"/>
    <dbReference type="EnsemblBacteria" id="ADO55918">
        <property type="protein sequence ID" value="ADO55918"/>
        <property type="gene ID" value="PPSC2_09185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1936"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_19_4_9"/>
    <dbReference type="OMA" id="RFYDEHH"/>
    <dbReference type="OrthoDB" id="1809950at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="19305" checksum="9482A88E78C9D547" modified="2011-01-11" version="1">MIIIRNIEPADAEAYWNLRLEALKMNPEAFGTSYEEAVQVSLFDIVKQIQNKRDHYILGAFTKDHQLAGMTGFRREHKIKTRHKGTIWGVYVPPIYRGQGIAKKLLLEVISRGRKVEGLKQINLSVVAANQAAVELYRKLGFKTYGIEKNALEYHGQGYDEELLAYFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH9</accession>
    <name>E3EHH9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Spore cortex-lytic enzyme</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sleB1</name>
        <name evidence="9" type="ORF">PPSC2_10195</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SleB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370741.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22665"/>
    <dbReference type="EnsemblBacteria" id="ADO56132">
        <property type="protein sequence ID" value="ADO56132"/>
        <property type="gene ID" value="PPSC2_10195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2148"/>
    <dbReference type="eggNOG" id="COG3409">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3773">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053345_0_0_9"/>
    <dbReference type="OMA" id="KTYMAVR"/>
    <dbReference type="OrthoDB" id="682655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011105">
        <property type="entry name" value="Cell_wall_hydrolase_SleB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042047">
        <property type="entry name" value="SleB_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014224">
        <property type="entry name" value="Spore_cortex_SleB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07486">
        <property type="entry name" value="Hydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02869">
        <property type="entry name" value="spore_SleB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3" id="KW-0309">Germination</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0749">Sporulation</keyword>
    <feature type="domain" description="PG_binding_1" evidence="7">
        <location>
            <begin position="63"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Hydrolase_2" evidence="8">
        <location>
            <begin position="184"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="124"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="129"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="30735" checksum="5CFBE3590592C1F6" modified="2011-01-11" version="1">MKKTMVWICTGILAASAITYTGLFKNDSAQERAESLSTQQKVTAAQPVQPTFSSEAVDFGSYGQDVYELQSRLKLLGFFGGKVDSHFGSSTLKAVKGFQKEFGIRPDGVVGAKTKLKLVNATPHWKPTETPMHRNNQGSDQGQAANNNNKSDQNEETMGSANTMGLSENDLKIMANAVYGESRGEPFEGQVAVAAVILNRVKSPSFPNTPSGVIFQPGAFTAVADGQIWLTPNETAQKAVRQALNGWDPSGGCLYYFNPKTATSKWIWSRPQVKTIGEHIFCM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHK3</accession>
    <name>E3EHK3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ADP-ribose pyrophosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rppH1</name>
        <name evidence="3" type="ORF">PPSC2_10300</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56156.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22770"/>
    <dbReference type="EnsemblBacteria" id="ADO56156">
        <property type="protein sequence ID" value="ADO56156"/>
        <property type="gene ID" value="PPSC2_10300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2170"/>
    <dbReference type="eggNOG" id="COG1051">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037162_3_1_9"/>
    <dbReference type="OrthoDB" id="1846332at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="2">
        <location>
            <begin position="43"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56156.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="30689" checksum="76AE618D4B3DB832" modified="2015-05-27" version="2">MVMPMDSNRINEEAQKASYNIKKYRTPDGAPADIVMFTLTKRERKTVTKTLPIRELKVMLIKRRSWPFAGRWALPGGFCQEDESIYGAAKRELLEETGVDGGHLEYLGVYSGPGRDPRGWIISHAFFALVEEWMLEQRQAADDASEVGLFTIREALEELELAFDHRDIIVDAYRKIQLQMLQTTIAKQFLPPHFTLGELYQVIQSVVPDFEEPNFIRKITSTRSRQGILEEVRDENGKPLSSNQYSQRPAQLYRFSDRVPRLSIYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHN1</accession>
    <name>E3EHN1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">L-cystine-binding protein TcyJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ytmJ</name>
        <name evidence="8" type="ORF">PPSC2_10910</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370899.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23300"/>
    <dbReference type="EnsemblBacteria" id="ADO56293">
        <property type="protein sequence ID" value="ADO56293"/>
        <property type="gene ID" value="PPSC2_10910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2310"/>
    <dbReference type="eggNOG" id="COG0834">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_18_5_9"/>
    <dbReference type="OMA" id="IKYQPVT"/>
    <dbReference type="OrthoDB" id="1632224at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-0564">Palmitate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168218" evidence="6">
        <location>
            <begin position="30"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="7">
        <location>
            <begin position="38"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="31157" checksum="6F76A6E17AE7AB9B" modified="2011-01-11" version="1">MKKWFAILSVMAIILVLAGCGSSDDTSSASGSSGDVKKIIVGTGTQFKNVCFIDENGNLTGFDVELIKELDKRLPQYEFEFKTMDFGNLLLSLDAGKIDLVSHQMEKNPEREAKYLFNKNPYSIFLNRVAVAKDNNSIHSIDDLKGKKVLTSPTSNAAYVLKEYNKTHGDALNIVYTSGAANDMVQQITSGRIDATVTTDFANRFNTDEKGEVALKTVGDPLTQSDVLYVLNKNEQGLADDLDKAIQEVKDDGTLSKLSIKWLGEDFTKSLEDVKKESTSSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHU8</accession>
    <name>E3EHU8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371045.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2468"/>
    <dbReference type="EnsemblBacteria" id="ADO56440">
        <property type="protein sequence ID" value="ADO56440"/>
        <property type="gene ID" value="PPSC2_11610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2455"/>
    <dbReference type="HOGENOM" id="CLU_1523702_0_0_9"/>
    <dbReference type="OrthoDB" id="1844170at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="20800" checksum="AE330D33DA9B69FE" modified="2011-01-11" version="1">MRHKGIDQTFTHLQTSAEEDQEWEYSRARDMAILGLWDEYTLSAQRLCERMATVTRQIRPSEYETFPTQFEWLEQKETDLIIDGIWSADLHGDHCLFVNIGEHHPEWHTSIEAYIYDTQVIDEGFFLQYLNTSPKATAYATSFRNNGYATMCELLDRYVREGKLERRPFGFKRTNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI29</accession>
    <name>E3EI29_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">msmF1</name>
        <name evidence="7" type="ORF">PPSC2_03610</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369333.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16425"/>
    <dbReference type="EnsemblBacteria" id="ADO54697">
        <property type="protein sequence ID" value="ADO54697"/>
        <property type="gene ID" value="PPSC2_03610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.707"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_0_9"/>
    <dbReference type="OMA" id="TLSVIWD"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="157"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="205"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="262"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="71"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="33117" checksum="9FCEF804631E68F0" modified="2011-01-11" version="1">MPFKIYKKYVMLLAFTAPALIFYAIFLLIPTISGMYYSFTDWNGLNSNYNFIGLGNFVESLKEDPDFLNSLWFTLKYVLVMIVLQNVLALVLAVLIESRTRSKGFFRTLFFMPNMISTIISAFMWTFVFSSVLPQIAEKTAIAFLGQSWLGDPKVSFFSIIIVSLWNGVGYMMIIYLAALQGVPQSLKEAAIIDGANAFQTLRSVTLPMITHAITICFFLTLNGAFKVYEVVYGLTGGGPGRSTQVITMNIYEEAFSNNFRYGYASAKSVILFAIVLIFTLIQLRVMKKREVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI45</accession>
    <name>E3EI45_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aldehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gabD</name>
        <name evidence="3" type="ORF">PPSC2_03675</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369349.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16500"/>
    <dbReference type="EnsemblBacteria" id="ADO54713">
        <property type="protein sequence ID" value="ADO54713"/>
        <property type="gene ID" value="PPSC2_03675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.723"/>
    <dbReference type="eggNOG" id="COG1012">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005391_1_0_9"/>
    <dbReference type="OMA" id="SAYFIAE"/>
    <dbReference type="OrthoDB" id="384611at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="2">
        <location>
            <begin position="19"/>
            <end position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="50572" checksum="704FD95E161F3F24" modified="2011-01-11" version="1">MQQHLFIGGEWQVASSYTTLKSPYSGEVIAEVAEATAEDAKTAIQAASDARAVMRAMPAHQRSAILEKLADLLEERREDAARIIAREASKPWKAALAEVDRTVQTYKFAAEEAKRIHGETIPLDAAPGGEGRMAYTLKEPVGVVGAITPFNFPMNLVAHKVGPALAAGNTVVLKPAEQTPLSAYLIAELLEQAGLPAGALNVISGDGKTIGDVLVTDPRVSYITFTGSPAVGTEIRSKAGLKRVTLELGSNAAVIIDRDTDVDAVIDRCVSGAFANQGQVCISVQRIYVVDELYDTFVSRFVEATQRLKIGDPLDPDTDVSALISAKDVERVREWLEEAVQAGARIALGGHTEGGILEPTVLLDVDPTSKVSCREVFAPLVLIHSVSSVDEAVNHVNNSIYGLQAGIYTRNITTALDAADKLEVGGVMINDIPSFRVDHMPYGGVKQSGTGREGVKYAMEEMLETKLIVIKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG1</accession>
    <name>E3EIG1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycine/betaine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">proV</name>
        <name evidence="8" type="ORF">PPSC2_06220</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55274.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599546.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19175"/>
    <dbReference type="EnsemblBacteria" id="ADO55274">
        <property type="protein sequence ID" value="ADO55274"/>
        <property type="gene ID" value="PPSC2_06220"/>
    </dbReference>
    <dbReference type="GeneID" id="66573697"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1282"/>
    <dbReference type="eggNOG" id="COG4175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_2_2_9"/>
    <dbReference type="OrthoDB" id="1713578at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031460">
        <property type="term" value="P:glycine betaine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005892">
        <property type="entry name" value="Gly-betaine_transp_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01186">
        <property type="entry name" value="proV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0129">CBS domain</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="4"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="7">
        <location>
            <begin position="278"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="60"/>
            <end position="67"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55274.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="45384" checksum="F356C924B1FA6121" modified="2015-05-27" version="2">MTILEVKNVSKLFGPHAEQGVPLLEQGWGKEKLAKEKQITVGVNKANMEIKQGEIFVIMGLSGSGKSTLVRMLNRLIEPTSGEILVHGKDLRKMNKEQLREVRRKTISMVFQKFALFPHRTVLENVEYGLEIQKVDKAQRQEKAQQALELVGLKNWGDKMPDELSGGMQQRVGLARALANDPEVLLMDEAFSALDPLIRRDMQDELLELQDKMKKTIVFITHDLDEALRIGDRIALMRDGVVVQIGTPEEIMIQPANSYVARFVEDVDLSKVLTAAHVMLRPETITMDRGPRVALELMRERGISNLFVIDRTKKLLGVINAEDAVHALRNNLKIEDILITDGPQVTAETVINDLFEITSSSKVPLAVVDDKQKLLGVIVRGALLGALSGDVPTTKEVNAHDTETANR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIJ2</accession>
    <name>E3EIJ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370257.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55630">
        <property type="protein sequence ID" value="ADO55630"/>
        <property type="gene ID" value="PPSC2_07850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1635"/>
    <dbReference type="eggNOG" id="ENOG5030488">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1757031_0_0_9"/>
    <dbReference type="OMA" id="PYHSDLT"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="17390" checksum="F1BBF158EE5EE431" modified="2011-01-11" version="1">MTITLNNKGIVNLTTTQTPYHSDLTIEKLCWFLEVSPKAEILVTKMKFMLRTVERMNEFLQRKLPTMTGLSLLTVMRKEDIDAHGYTFKADFVYDYYRNKKGALEKLFQEEMPTWKVNRLKKDDPERTYDGYVERGKYSSSLEVALSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIK5</accession>
    <name>E3EIK5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55643.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905717.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1667"/>
    <dbReference type="EnsemblBacteria" id="ADO55643">
        <property type="protein sequence ID" value="ADO55643"/>
        <property type="gene ID" value="PPSC2_07895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1651"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OrthoDB" id="495395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55643.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="54763" checksum="B4D27E7D6C1C6731" modified="2015-05-27" version="2">MKITPTIRAELEQFLQQEGLTLSKFGQIAGMNRGIISSIVKGNKSMSINQLDRITEAMGLPEGRFYDLFIENYIIDHPPNMRRIEPFLFRCAELDKLDAIRRVVGAIMDNLLYSPKLFEIAEELLSQGRHAAALLLYEGVAEAERYQHSERLAVCQYRIFKIQISDDQSQNVGAAAVFEAFVERLDEIDQLDALKDLANVYRSLRKWDKVEEMAIKMRAKAEIQYTMKHQQNSREQTESSDKLSRPLFVYIAYADLLCANACEEQGNYEQALHYTYAYSNLDWVRETDEDTQHWIGLFKHWSQANILAYRLLSGDVSALHEYLNFIDDSSDTIQEDRVTQLLNIMTAANRYELDLNDILKRFETEIGSLSQRPSSDDMYTQQVIPEYSALCGYELAYYYLNHGMHYDGFNHLFCAMVKAHILNNETYFINCMGLFVRFKAHVVSETKTEFYNLIEKVWLNNVEKNGNVDRCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIP5</accession>
    <name>E3EIP5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Catalase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydhU</name>
        <name evidence="3" type="ORF">PPSC2_08080</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the manganese catalase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370306.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20710"/>
    <dbReference type="EnsemblBacteria" id="ADO55683">
        <property type="protein sequence ID" value="ADO55683"/>
        <property type="gene ID" value="PPSC2_08080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1700"/>
    <dbReference type="eggNOG" id="COG3546">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057467_1_0_9"/>
    <dbReference type="OMA" id="PHHYIIG"/>
    <dbReference type="OrthoDB" id="1420351at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd01051">
        <property type="entry name" value="Mn_catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007760">
        <property type="entry name" value="Mn_catalase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039377">
        <property type="entry name" value="Mn_catalase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05067">
        <property type="entry name" value="Mn_catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="265"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="31859" checksum="774D331D66D40E21" modified="2011-01-11" version="1">MYFYKEDLINLIVPDKPDPAAAKVIQEVLGGRFGEMRTMMQFFFQSNNFRGNAVQYRDLIRGVFLEELSHVELVQHTINQLLTGSGEDQAGDAGIDHAPLDEAIKHANPHHFIMGAQSSLPVDASGNPWLGSYVYSHGNLISDLLDNLVLESTGVLQKSRIYEMSSNKTFRETLAFLIVRDNAHQNAFAKALETLGVDWGKLFPVPNYDINKYPECRKYVEMGFHNAQFNFRLDSTRIGEIFNGQTPSRNGGDLSVIDPPEGFPLPYMPELPNEHSPGLQDLNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ11</accession>
    <name>E3EJ11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56192.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599682.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56192">
        <property type="protein sequence ID" value="ADO56192"/>
        <property type="gene ID" value="PPSC2_10465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2207"/>
    <dbReference type="eggNOG" id="ENOG5032S1V">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_146617_1_0_9"/>
    <dbReference type="OrthoDB" id="1847882at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168474" evidence="1">
        <location>
            <begin position="27"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56192.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="174" mass="20100" checksum="644A3C7E1280F4E4" modified="2015-05-27" version="2">MKNTVILLFVMALTLICVVGCMGLQPKNTDLEGGKPPKVQIQIDKRIYKTKLGTYCWTTSCVDSAGPVELLKGKEPIPVKPGDVVKFLMKYEPQPNKFHVEQFYEGRLTEVLLKENSFQVPTEKGTYFYSYGVWWMDEDIENQSRGDAFYHFALKVIEIKITNATRWYHKNRLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ51</accession>
    <name>E3EJ51_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YneQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yneQ</name>
        <name evidence="1" type="ORF">PPSC2_10635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370838.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23030"/>
    <dbReference type="EnsemblBacteria" id="ADO56232">
        <property type="protein sequence ID" value="ADO56232"/>
        <property type="gene ID" value="PPSC2_10635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2247"/>
    <dbReference type="eggNOG" id="ENOG5032S7S">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_153135_0_0_9"/>
    <dbReference type="OMA" id="PHFDLIG"/>
    <dbReference type="OrthoDB" id="1736266at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12990" checksum="0D20B4C96AF1D615" modified="2011-01-11" version="1">MAFGITRQELMSWKREVSRGQIAFLTHYWLDDRFPGITTVTKVGCSDLDKLRLWCKHNGLDPQYIHQRQPYPHFDLIGIKQTEILRKYGMSDQLRRFEPHLQPSTRPTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJB1</accession>
    <name>E3EJB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371003.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2427"/>
    <dbReference type="EnsemblBacteria" id="ADO56399">
        <property type="protein sequence ID" value="ADO56399"/>
        <property type="gene ID" value="PPSC2_11410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2414"/>
    <dbReference type="eggNOG" id="ENOG50334UZ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_180011_0_0_9"/>
    <dbReference type="OMA" id="LNDNGNM"/>
    <dbReference type="OrthoDB" id="1877408at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="12241" checksum="C9A0D856A6A8EF73" modified="2011-01-11" version="1">MASLGKNGNGNGNRKSKSPPNGQKKNGLNSNSAIFSALQGKNVEVLVAALLLTGKLNVDSVTLYRQATLFLGLTGKYKTLASAPTNVDNMVKFLNDNGNMTLDQVIQAFSQKINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJP3</accession>
    <name>E3EJP3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59641.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886182.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0249"/>
    <dbReference type="EnsemblBacteria" id="ADO59641">
        <property type="protein sequence ID" value="ADO59641"/>
        <property type="gene ID" value="PPSC2_26930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5694"/>
    <dbReference type="HOGENOM" id="CLU_2370207_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59641.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="11230" checksum="B00B9A2440A23C6F" modified="2015-05-27" version="2">MKNAIIYRPHKGSLEESMKQAKEFLSMREMKEYIVKDWNNLFDIEDIVIKEDAHLDDRIGWNDVRLVTIKRLGEQDNMELYGCPQAIGYCATDYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK19</accession>
    <name>E3EK19_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386142.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0337"/>
    <dbReference type="EnsemblBacteria" id="ADO59728">
        <property type="protein sequence ID" value="ADO59728"/>
        <property type="gene ID" value="PPSC2_26535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5596"/>
    <dbReference type="HOGENOM" id="CLU_2827137_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="66" mass="8051" checksum="546B5742DCF70352" modified="2011-01-11" version="1">MDKKKSNREAEVNQERKLERYLKAELRKYRLWSFLEQHGSERSKYQTGYYHALQSVLSKMKKINIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK62</accession>
    <name>E3EK62_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386185.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0381"/>
    <dbReference type="EnsemblBacteria" id="ADO59771">
        <property type="protein sequence ID" value="ADO59771"/>
        <property type="gene ID" value="PPSC2_26305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5541"/>
    <dbReference type="HOGENOM" id="CLU_2466134_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="88" mass="10387" checksum="4B5A4934110B70BF" modified="2011-01-11" version="1">MENEQPFFITWFESDKAELIEDIMDARNIPMDMVPTPANIREQEDYVMVCKDAFQVRMGIDRVLLLGSIDFPKETRCFNERGVLLWVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK89</accession>
    <name>E3EK89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385830.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0022"/>
    <dbReference type="EnsemblBacteria" id="ADO59416">
        <property type="protein sequence ID" value="ADO59416"/>
        <property type="gene ID" value="PPSC2_27970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5928"/>
    <dbReference type="HOGENOM" id="CLU_1775634_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="8"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="17545" checksum="2793ED346808BA9C" modified="2011-01-11" version="1">MFGRLFAKRDLLDEYEKQRLNAKKQEEQAQPMNSRSRWFEQMLTTENSVDEYEKQRLNEKKEEEQIRPLYSVMIHFTPQAPYVYILENDTFVIYDGVAIVGDFLEPEMRVGGSFVYQNELGDLQEVELFLKDYQLQNPIRIEYLEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKD2</accession>
    <name>E3EKD2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385873.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0065"/>
    <dbReference type="EnsemblBacteria" id="ADO59459">
        <property type="protein sequence ID" value="ADO59459"/>
        <property type="gene ID" value="PPSC2_27770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5884"/>
    <dbReference type="HOGENOM" id="CLU_1609215_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18666" checksum="013EDEAF2AA3ACE3" modified="2011-01-11" version="1">MQVDVNFLSLVVIAIIAVVVISFLVRSFMKFIIIGVVIYFLFMMGFVWGVDDLNHKLHLNQIFNASANDKVQSTYGSFVKKREEHSVVNTKELQNVIDQTIQKAIVDAGNRIKAVDKDALLKELQLKLEGYDEEDIQKALKQSGSNLHQVMTPEQVKTLAKKSKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKN0</accession>
    <name>E3EKN0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386276.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0473"/>
    <dbReference type="EnsemblBacteria" id="ADO59862">
        <property type="protein sequence ID" value="ADO59862"/>
        <property type="gene ID" value="PPSC2_25880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5437"/>
    <dbReference type="HOGENOM" id="CLU_2438062_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10070" checksum="1ED6ED64221C1F29" modified="2011-01-11" version="1">MDNEIIILNAWATTDGESGFGEVFTDETEAMREANLRGSELIRGYTISGGVNIRDQVEDLFEDFYRNKEDMNAILVEEGLVGFVTDLSTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKU4</accession>
    <name>E3EKU4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidase_A24 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_27365</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase A24 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385959.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0152"/>
    <dbReference type="MEROPS" id="A24.019"/>
    <dbReference type="EnsemblBacteria" id="ADO59545">
        <property type="protein sequence ID" value="ADO59545"/>
        <property type="gene ID" value="PPSC2_27365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5792"/>
    <dbReference type="HOGENOM" id="CLU_134967_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000045">
        <property type="entry name" value="Prepilin_IV_endopep_pep"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01478">
        <property type="entry name" value="Peptidase_A24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="70"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="134"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_A24" evidence="3">
        <location>
            <begin position="25"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="17542" checksum="EBCE89D244B4B0D9" modified="2011-01-11" version="1">MFIDNYLEHVQMSMGHVYHNGYVAMLFTLYLFIATIIDVKLRKIPNKLNLAFVLVRLILIPWFPLSILDLLGAIIAFIALLIPAMVKNHKMGGDIKMAGVVGLYMGLYLVPIFILLACIYFMVYVGTNKRMLPFAPFFLASHLTLMLAYYVFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL04</accession>
    <name>E3EL04_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385980.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59566">
        <property type="protein sequence ID" value="ADO59566"/>
        <property type="gene ID" value="PPSC2_27265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5770"/>
    <dbReference type="HOGENOM" id="CLU_2207446_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="12156" checksum="CB37B5344EE99C93" modified="2011-01-11" version="1">MFYHVYTDRSELSVDEAVAVAETNHGYRYGDMKKVHVLVSGLVKYPGLIKDVLDLLLHGEKENKLVVLQNDVDQQSIKHSLEGKVPAMYRTIVKYLNQVVKKKTVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL97</accession>
    <name>E3EL97_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59929.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0540"/>
    <dbReference type="EnsemblBacteria" id="ADO59929">
        <property type="protein sequence ID" value="ADO59929"/>
        <property type="gene ID" value="PPSC2_28525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6053"/>
    <dbReference type="HOGENOM" id="CLU_2956323_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59929.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="7245" checksum="779915B325A625E8" modified="2015-05-27" version="2">MYFGFDVYYVVDHSNRWILFFDFSDSCFDYSYLLVGYFDVWVRTIYAQAIFILEKLVEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCF1</accession>
    <name>A0A0D5ZCF1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599620.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44217">
        <property type="protein sequence ID" value="AKA44217"/>
        <property type="gene ID" value="PPSC2_08635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1818"/>
    <dbReference type="HOGENOM" id="CLU_2684399_0_0_9"/>
    <dbReference type="OrthoDB" id="2033689at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8690" checksum="1D3774A50F87D2CD" modified="2015-05-27" version="1">MYDYKSIHSDKYMSKIISEVVEQLLASVLGFTKVSHLTFHKEVNGRFKITAVTALMMPKFLEPFRYVSRMYHSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCM5</accession>
    <name>A0A0D5ZCM5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44331">
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        <property type="gene ID" value="PPSC2_25555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5418"/>
    <dbReference type="HOGENOM" id="CLU_2524438_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9765" checksum="34CA32850B42347F" modified="2015-05-27" version="1">MLNTMMGKEQFSQSVSAINGICPIRATWLTPEANYDSKPELRSFYVYEQFLGWYNSKRLGRFIEGISISLLHPKFFSTFRSVMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCP2</accession>
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            <fullName evidence="1">Uncharacterized protein</fullName>
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    </protein>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44388">
        <property type="protein sequence ID" value="AKA44388"/>
        <property type="gene ID" value="PPSC2_28000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5935"/>
    <dbReference type="HOGENOM" id="CLU_2937336_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="7172" checksum="8C695201AA7879AA" modified="2015-05-27" version="1">MNDRCQSYGIGDYVFVQYDKDQECPGVIRKINNNSFRVEIRAEHDVDWVDCKRGQLRPMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCV5</accession>
    <name>A0A0D5ZCV5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
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    </organism>
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    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
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    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44386.1"/>
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    </dbReference>
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    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44386">
        <property type="protein sequence ID" value="AKA44386"/>
        <property type="gene ID" value="PPSC2_27800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5892"/>
    <dbReference type="HOGENOM" id="CLU_2317606_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11574" checksum="8AD4A8F3DCA5985B" modified="2015-05-27" version="1">MKSEACVYLCSIIILNEYQQLLFDETFLVKVENVSESVAIAWMMQKLNEIETSINAEMNYPVLLSCHCQFPMPGEICYDALSEDELRIMFPQINEWKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4I2</accession>
    <name>E3E4I2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Endonuclease IV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nfo3</name>
        <name evidence="9" type="ORF">PPSC2_13680</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AP endonuclease 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371484.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01370"/>
    <dbReference type="EnsemblBacteria" id="ADO56881">
        <property type="protein sequence ID" value="ADO56881"/>
        <property type="gene ID" value="PPSC2_13680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2910"/>
    <dbReference type="eggNOG" id="COG0648">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025885_0_4_9"/>
    <dbReference type="OMA" id="NPRGWAT"/>
    <dbReference type="OrthoDB" id="1088517at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00019">
        <property type="entry name" value="AP2Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001719">
        <property type="entry name" value="AP_endonuc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018246">
        <property type="entry name" value="AP_endonuc_F2_Zn_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21445">
        <property type="entry name" value="PTHR21445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00518">
        <property type="entry name" value="AP2Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00587">
        <property type="entry name" value="nfo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00730">
        <property type="entry name" value="AP_NUCLEASE_F2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00731">
        <property type="entry name" value="AP_NUCLEASE_F2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51432">
        <property type="entry name" value="AP_NUCLEASE_F2_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
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    <keyword evidence="7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
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        <location>
            <begin position="23"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="31078" checksum="DECE146763A253EE" modified="2011-01-11" version="1">MPKLLIGSHVSTRGGFSKAAIRAREQGGRSFQYFPKNPRSLKLKEWSSIDAAACKTYCSEHQLQSIAHSPYPVNPAHGRERGQELYELMVASLRNDLDIAEACGSKGIVVHFGHMHSSDPLEGYRNIINCLNDVLEGWQGNAKILIENQAGDHGPMGTTLEEMVQIRQLCRDPGSIGFCLDTCHAYAAGLWNGGMDEALLEKGDRLGYWPALCGVHLNDSKYPYGSKKDRHARVGQGYIGTEGMRWITEQEAVRGIPVVLESEAGPDGTHQEDIQMIQSWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E521</accession>
    <name>E3E521_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">YxiS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yxiS</name>
        <name evidence="1" type="ORF">PPSC2_15300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02925"/>
    <dbReference type="EnsemblBacteria" id="ADO57229">
        <property type="protein sequence ID" value="ADO57229"/>
        <property type="gene ID" value="PPSC2_15300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3269"/>
    <dbReference type="eggNOG" id="ENOG5032S7D">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_161830_0_0_9"/>
    <dbReference type="OMA" id="FAQWCVN"/>
    <dbReference type="OrthoDB" id="1796762at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12189" checksum="B7ABEDF71646D217" modified="2011-01-11" version="1">MEENNRGKQVEEAIIENYKQEEDMMILVFAQWCINNDLEPEELYRAAYPQQDSNERLLRIRKLTVSREEAGDIPLDTVLGVLSMFGNEDLAMVVSEAAAQLPSERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E540</accession>
    <name>E3E540_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DhaK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dhaK</name>
        <name evidence="2" type="ORF">PPSC2_15390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371838.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03040"/>
    <dbReference type="EnsemblBacteria" id="ADO57248">
        <property type="protein sequence ID" value="ADO57248"/>
        <property type="gene ID" value="PPSC2_15390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3288"/>
    <dbReference type="eggNOG" id="COG1461">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017496_1_0_9"/>
    <dbReference type="OMA" id="TRTIPQG"/>
    <dbReference type="OrthoDB" id="1554133at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004371">
        <property type="term" value="F:glycerone kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019986">
        <property type="entry name" value="DAK2_dom-cont_prot_YloV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004007">
        <property type="entry name" value="DhaL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036117">
        <property type="entry name" value="DhaL_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033470">
        <property type="entry name" value="UPF_DhaK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13684">
        <property type="entry name" value="Dak1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02734">
        <property type="entry name" value="Dak2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01121">
        <property type="entry name" value="Dak1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01120">
        <property type="entry name" value="Dak2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101473">
        <property type="entry name" value="SSF101473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03599">
        <property type="entry name" value="YloV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51480">
        <property type="entry name" value="DHAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DhaL" evidence="1">
        <location>
            <begin position="9"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="594" mass="64430" checksum="391A4532A89DCFC7" modified="2011-01-11" version="1">MSNRSLNGTDFTAMVLAGAEQLQQHAEHVNSLNVFPVPDGDTGTNMNLTMSAGVTELKRGDSSSIGVMSGILSKGLLMGARGNSGVILSQLFRGFSRYAAPYEELNTLQFASALQSGVDAAYKAVVKPVEGTILTVAKEAARHAVFFSRRTNDITELMEEVLAKAKETLAMTQDMLPVLKQVGVVDSGGQGLVYIYEGFMQHLGSGLVTSPTSKGDNVHPVFAPYVSERPTSAPVAPSPDAPISAQAKLETENIEFLYDMEFFINRQLGEAQGTNFDEEAFRKALSVDGDSIIVISDDDVIKVHVHSKAPGEVLNLALRYGEITQIRILNMREQHRDLLSAGMDGAPEPEWFAEIPTEPAREEEPSEPPAHELAPFGFIAVASGEGIADIFRSLGVDVVLSGGQTMNPSTEDFVNAARSIAAQHIFILPNNSNIILAAEQARELLEVERLVSVIPSKTIPQGIAAAFAYQEEEAFEVNQDNMRDAVTRVKSGQVTYAVRDTTLDDLHITAGHYIGIQDSKIVATEEQLMATSRLLLAKMLVNGDEIVTILTGSDAKQEETDQLVAWLEENYSDVEVEVHEGGQPIYPYLFSVET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E547</accession>
    <name>E3E547_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">16S rRNA (cytosine(967)-C(5))-methyltransferase</fullName>
            <ecNumber evidence="5">2.1.1.176</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">16S rRNA m5C967 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">rRNA (cytosine-C(5)-)-methyltransferase RsmB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">sun</name>
        <name evidence="15" type="ORF">PPSC2_15430</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>cytidine(967) in 16S rRNA + S-adenosyl-L-methionine = 5-methylcytidine(967) in 16S rRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42748"/>
            <dbReference type="Rhea" id="RHEA-COMP:10219"/>
            <dbReference type="Rhea" id="RHEA-COMP:10220"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74483"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.176"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.176" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371845.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03080"/>
    <dbReference type="EnsemblBacteria" id="ADO57255">
        <property type="protein sequence ID" value="ADO57255"/>
        <property type="gene ID" value="PPSC2_15430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3297"/>
    <dbReference type="eggNOG" id="COG0144">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0781">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005316_0_1_9"/>
    <dbReference type="OMA" id="RVNRQHH"/>
    <dbReference type="OrthoDB" id="1064993at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008649">
        <property type="term" value="F:rRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018314">
        <property type="entry name" value="Fmu/NOL1/Nop2p_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031341">
        <property type="entry name" value="Methyltr_RsmF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001678">
        <property type="entry name" value="MeTrfase_RsmB/NOP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035926">
        <property type="entry name" value="NusB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006027">
        <property type="entry name" value="NusB_RsmB_TIM44"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023267">
        <property type="entry name" value="RCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004573">
        <property type="entry name" value="rRNA_ssu_MeTfrase_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22807">
        <property type="entry name" value="PTHR22807"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01189">
        <property type="entry name" value="Methyltr_RsmB-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17125">
        <property type="entry name" value="Methyltr_RsmF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01029">
        <property type="entry name" value="NusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR02008">
        <property type="entry name" value="RCMTFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48013">
        <property type="entry name" value="SSF48013"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00563">
        <property type="entry name" value="rsmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01153">
        <property type="entry name" value="NOL1_NOP2_SUN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51686">
        <property type="entry name" value="SAM_MT_RSMB_NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12 15" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 12" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="8 12" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="7 12 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM_MT_RSMB_NOP" evidence="14">
        <location>
            <begin position="193"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="12">
        <location>
            <begin position="283"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="12">
        <location>
            <position position="406"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="307"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="334"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="353"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00030399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00031088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO57255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="471" mass="52085" checksum="36F671BB7EF934D3" modified="2011-01-11" version="1">MSGGHSRQGDQRKGVGIRPGKTRKQTAREVALDVLTGVEQEGAYSNFELNRRLQQAGLSASDVGLTTELVYGTVARRNTLDYFLNKFVQKGTAKLQPWVRSLLRMSVYQLVYLDRVPDHAVVSEAVTIAKRRGHQGISGMVNGVLRSMLREPDKLRIPDGLSAEERISLEHSHPQWLVKRWIKQYGVDTAEAICKANNEPPAVSVRVNTTMTSRDQLLDEMVAKGIDAVPSPVSPYGIVVRSGGNMALTSWYTDGLLSVQDESSMLVAEAVAPEPGMTVLDCCAAPGGKTAHMAELMKDRGRIVANDLHAHKHQLIREQASRLGLDAVETVTGDALDLKERYAPASFDRILLDAPCSGFGVIRRKPDLRWSKTAEDVRDITQLQHELLDSVAGLLKPGGILVYSTCTIEPDENEGQLARFLSEHPEYELAKDHSFPDVNHEMDGIQKGSVQLLPQHFHSDGFYIARLRRVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E568</accession>
    <name>E3E568_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Rho_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_16255</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3472"/>
    <dbReference type="EnsemblBacteria" id="ADO57428">
        <property type="protein sequence ID" value="ADO57428"/>
        <property type="gene ID" value="PPSC2_16255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16255"/>
    <dbReference type="eggNOG" id="ENOG5030PJM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2047377_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011112">
        <property type="entry name" value="Rho_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07498">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00959">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho_N" evidence="2">
        <location>
            <begin position="40"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00959"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="11579" checksum="953C898D6C127C8B" modified="2011-01-11" version="1">MMLYGIRFPAKVPVQVEQGEVVKKLRERSDFDIKEEKVIPLEDLTLVQLKDKAKAANIEGFGSMNKSDLIAALRGGGKPSDNTPPADDPSKTEGADGKSADANNPPTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N7</accession>
    <name>E3E5N7_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">kdgF</name>
        <name evidence="2" type="ORF">PPSC2_18485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05700"/>
    <dbReference type="EnsemblBacteria" id="ADO57914">
        <property type="protein sequence ID" value="ADO57914"/>
        <property type="gene ID" value="PPSC2_18485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3962"/>
    <dbReference type="eggNOG" id="COG1917">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
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    <dbReference type="OMA" id="THSHPNE"/>
    <dbReference type="OrthoDB" id="1928636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025499">
        <property type="entry name" value="KdgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029883">
        <property type="entry name" value="KdgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="42"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12830" checksum="040BA1CAEFF202F7" modified="2011-01-11" version="1">MFFNDQDIQMDTVDSNTTRKVLAHSDQLMYIKVMFAKAQTGEILLHKHVHEQVTYVLKGSFKFMIDNGQTKEVQTVKEGDSIHFPSDTLHGCIPLEDDGILLDAFTPARADFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5U6</accession>
    <name>E3E5U6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydzF</name>
        <name evidence="2" type="ORF">PPSC2_19720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372737.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4215"/>
    <dbReference type="EnsemblBacteria" id="ADO58165">
        <property type="protein sequence ID" value="ADO58165"/>
        <property type="gene ID" value="PPSC2_19720"/>
    </dbReference>
    <dbReference type="GeneID" id="66576120"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4204"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_2_9"/>
    <dbReference type="OMA" id="KRKEYPQ"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="16"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12874" checksum="293EA77710C3839E" modified="2011-01-11" version="1">MSMAEFKGKVKNIEDTPFGYTVSVIGGKWKMVIIYLLAENQVVRFNDLKRQIGAITYKTLSSQLKELEADGLVNRKEYPQVPPKVEYSLTEKAETLLPVLEGLCEWGTKNQYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5X3</accession>
    <name>E3E5X3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">GDSL family lipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">celE3</name>
        <name evidence="4" type="ORF">PPSC2_19845</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372764.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07065"/>
    <dbReference type="EnsemblBacteria" id="ADO58192">
        <property type="protein sequence ID" value="ADO58192"/>
        <property type="gene ID" value="PPSC2_19845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4229"/>
    <dbReference type="eggNOG" id="COG2755">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042506_0_0_9"/>
    <dbReference type="OMA" id="MLGTPMM"/>
    <dbReference type="OrthoDB" id="1247435at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052689">
        <property type="term" value="F:carboxylic ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01831">
        <property type="entry name" value="Endoglucanase_E_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040794">
        <property type="entry name" value="CE2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037461">
        <property type="entry name" value="CtCE2-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17996">
        <property type="entry name" value="CE2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="303"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="CE2_N" evidence="3">
        <location>
            <begin position="21"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="SGNH_hydro" evidence="2">
        <location>
            <begin position="139"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="375" mass="41843" checksum="C3ABAFBF93445F5D" modified="2011-01-11" version="1">MSHNKRLKTYPLAKAKYVKVHGRTTPTLTPLTLFWTGSGIELNMKGSELWIEIEADYQIYESWISIVVNGVPMSRLMVTAGRHWICLLRGLNSDTVKNVRIVKDVQPMSSDSRCLLQIHALKVDGELLPVPDKPLKIEFIGDSITSGEGTIGAKEETDWVPMLFTALRNYTAITAEALNADYRVFSQSGWGVLTSWDNNPHGNIPAYYEQICGVLTGERNEALGAFADHDFTSWQPDVVVVNLATNDGGAFYSPAWTDPVSGKVYKQRLNEDGTFNEEDLQAFENATEHFLVKLRSCNPTAHIVWAYGMLGTPMMPAIYRAVDAYKKRTKDRKVSVFQLPNTTEETIGSRSHPGLSAHTKAAEELAGYLQEILKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y7</accession>
    <name>E3E5Y7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gfo1</name>
        <name evidence="2" type="ORF">PPSC2_19910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372778.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07130"/>
    <dbReference type="EnsemblBacteria" id="ADO58206">
        <property type="protein sequence ID" value="ADO58206"/>
        <property type="gene ID" value="PPSC2_19910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4243"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_5_0_9"/>
    <dbReference type="OMA" id="VQHHPWQ"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="15"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="362" mass="40214" checksum="3E4B1DC4F9AE5EE0" modified="2011-01-11" version="1">MNAAAAAQEPAMQDIRFGIIGCSAIAPRALLEPIRHVAGARVTALANRTVTKAQEMAERYEVNVVYGHAEDMLKDPDIDAVYIALSNDLHAEWIGRALQAHKHVLVEKPLCLNTADLAPLAAIVEQSNAYLLEGVMVQHHPWQRELRRIIESGRYGRLCSIETSLCIPAKEGHADNYRSRPEQGGGCFWDLGVYWLQFLQAVVGLEQAEFHSQSDFAGPHGCDWTFHAQARYPSGLEASALFSFERPYRCAHVLTFDSAVVTLKDCFRANLGFYKMTLKTEIKKDIAVNISDVEARSALSQSSLPTKTVFEPMNYYVNQLDAFCSIIRGETEPIPFHEAAERVRLLAAIHKAARSGEAIYAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E606</accession>
    <name>E3E606_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372797.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58225">
        <property type="protein sequence ID" value="ADO58225"/>
        <property type="gene ID" value="PPSC2_20000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4262"/>
    <dbReference type="eggNOG" id="ENOG502ZTYS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_198854_0_0_9"/>
    <dbReference type="OMA" id="ILHTMEE"/>
    <dbReference type="OrthoDB" id="2029180at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7520" checksum="E35E32F3E6F1267F" modified="2011-01-11" version="1">MQMDDALSLVTNVGFPAGLCFILLRHILHTMEEKLDKLDLSLHELIQVIQDLNDNNSPSSKSSKPDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E636</accession>
    <name>E3E636_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ThuA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371325.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00570"/>
    <dbReference type="EnsemblBacteria" id="ADO56721">
        <property type="protein sequence ID" value="ADO56721"/>
        <property type="gene ID" value="PPSC2_12885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2746"/>
    <dbReference type="eggNOG" id="COG3828">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100195_0_0_9"/>
    <dbReference type="OMA" id="AGWHGGI"/>
    <dbReference type="OrthoDB" id="1452706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029010">
        <property type="entry name" value="ThuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06283">
        <property type="entry name" value="ThuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ThuA" evidence="1">
        <location>
            <begin position="3"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="26672" checksum="7CE8D266B0E839C1" modified="2011-01-11" version="1">MRKALIVWGGWNGHEPEQVAAIFERILKEEGFEVEVSSTLEAYQDAEKLLGLDLIVPMWTMGQIEQELINNVSAAVQSGVGLAGCHGGMCDAFRNNVDWQFMTGGQWVAHPGNDGVEYMVNIKRGSSPLLDHIEDFQVISEQYYLHVDPAVEVLATTRFPVVPGPHSANGPVDMPVVWTKRWGNGRVFYNSLGHHADIIEIPQVTEMMRSGFLWTAAGKQAATSRGSSLAEAYTGMADNQQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E650</accession>
    <name>E3E650_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bacteriocin ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spaG</name>
        <name evidence="2" type="ORF">PPSC2_12970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371339.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00645"/>
    <dbReference type="EnsemblBacteria" id="ADO56735">
        <property type="protein sequence ID" value="ADO56735"/>
        <property type="gene ID" value="PPSC2_12970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2763"/>
    <dbReference type="eggNOG" id="COG4200">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077103_0_0_9"/>
    <dbReference type="OMA" id="PWAWPVR"/>
    <dbReference type="OrthoDB" id="1902621at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022294">
        <property type="entry name" value="ABC-transptr_permeasesu"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03733">
        <property type="entry name" value="lanti_perm_MutG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="189"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="220"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="27721" checksum="65FFD8C558395930" modified="2011-01-11" version="1">MISFFRNLKSDVLKLRRQPLLLVQLLVPLLGIAIFLAYYSFTPYSSISKIDGYLQVLAVTLPTMIGIVCSIAVEQESVAGNFQHLLTSPVKLLPFLSKLSLLLCLGFGSVLLASGGFGAGYIYLLKESPYGLKFYVLGACILFMSSLFLYILHFFVSLRFGKGASIGLGIMESLLSALLLTGLGDHNWIFIPSAWAARFITIWVQYGVSSADSIPETIQLDLGIRYCVVGTLVIMVLLGLWICRWEGQNSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G1</accession>
    <name>E3E6G1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative pre-16S rRNA nuclease</fullName>
            <ecNumber evidence="2">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">res</name>
        <name evidence="4" type="ORF">PPSC2_19005</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YqgF HJR family.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372607.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06215"/>
    <dbReference type="EnsemblBacteria" id="ADO58030">
        <property type="protein sequence ID" value="ADO58030"/>
        <property type="gene ID" value="PPSC2_19005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4073"/>
    <dbReference type="eggNOG" id="COG0816">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_098240_2_0_9"/>
    <dbReference type="OMA" id="PMGWTAQ"/>
    <dbReference type="OrthoDB" id="2075502at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004518">
        <property type="term" value="F:nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000967">
        <property type="term" value="P:rRNA 5'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16964">
        <property type="entry name" value="YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00651">
        <property type="entry name" value="Nuclease_YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005227">
        <property type="entry name" value="YqgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006641">
        <property type="entry name" value="YqgF/RNaseH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037027">
        <property type="entry name" value="YqgF/RNaseH-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33317">
        <property type="entry name" value="PTHR33317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03652">
        <property type="entry name" value="RuvX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00732">
        <property type="entry name" value="YqgFc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00250">
        <property type="entry name" value="RNAse_H_YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="YqgFc" evidence="3">
        <location>
            <begin position="1"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="15367" checksum="E2D241581FA9B1AF" modified="2011-01-11" version="1">MKVMGLDYGDRRIGVAVSDAFGWTAQGLVVIERRGDDSEFGKIANLVREHEIGEVVVGLPKNMNGTVGPRGEICIEFANRLKELLGLPVHLWDERLTTRSAERALLEADVSRKKRKQVVDKLAASLILQNYLDAHSTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G3</accession>
    <name>E3E6G3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Alanine--tRNA ligase</fullName>
            <ecNumber evidence="11">6.1.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Alanyl-tRNA synthetase</fullName>
            <shortName evidence="11">AlaRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">alaS</name>
        <name evidence="14" type="synonym">alaS1</name>
        <name evidence="14" type="ORF">PPSC2_19015</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10 11">Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala)</text>
            <dbReference type="Rhea" id="RHEA:12540"/>
            <dbReference type="Rhea" id="RHEA-COMP:9657"/>
            <dbReference type="Rhea" id="RHEA-COMP:9923"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78497"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="11">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="11">Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.7" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372608.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06225"/>
    <dbReference type="EnsemblBacteria" id="ADO58032">
        <property type="protein sequence ID" value="ADO58032"/>
        <property type="gene ID" value="PPSC2_19015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4075"/>
    <dbReference type="eggNOG" id="COG0013">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004485_1_1_9"/>
    <dbReference type="OMA" id="YHHTMFE"/>
    <dbReference type="OrthoDB" id="91428at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004813">
        <property type="term" value="F:alanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006419">
        <property type="term" value="P:alanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00036_B">
        <property type="entry name" value="Ala_tRNA_synth_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002318">
        <property type="entry name" value="Ala-tRNA-lgiase_IIc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018162">
        <property type="entry name" value="Ala-tRNA-ligase_IIc_anticod-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018165">
        <property type="entry name" value="Ala-tRNA-synth_IIc_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018164">
        <property type="entry name" value="Ala-tRNA-synth_IIc_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023033">
        <property type="entry name" value="Ala_tRNA_ligase_euk/bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003156">
        <property type="entry name" value="DHHA1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02272">
        <property type="entry name" value="DHHA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01411">
        <property type="entry name" value="tRNA-synt_2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00980">
        <property type="entry name" value="TRNASYNTHALA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101353">
        <property type="entry name" value="SSF101353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="SSF55186"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00344">
        <property type="entry name" value="alaS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50860">
        <property type="entry name" value="AA_TRNA_LIGASE_II_ALA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 11 14" id="KW-0436">Ligase</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 11" id="KW-0820">tRNA-binding</keyword>
    <keyword evidence="11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II_ALA" evidence="13">
        <location>
            <begin position="1"/>
            <end position="708"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="724"/>
            <end position="758"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="563"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="567"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="665"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="669"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00024779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO58032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="877" mass="96468" checksum="87CCB7243C3A0C8D" modified="2011-01-11" version="1">MKASEIRSKWLEFFESKGHVIEPSAPLVPHKDPSLLWINAGMAPLKPYFDGRVKPENPRIANSQKCIRTNDIENVGKTRRHHTFFEMLGNFSIGDYFKEEVITWAWEFLTDPKWIGFDPERLAVTVYPEDEEAYKLWNEKVGLPAERIIKLEDNFWDIGEGPCGPCTEIFYDRGEAYGSDMTDPEMYPGGENERYLEVWNLVFSQFNHNKDGSYTPLPNKNIDTGAGLERFASILQNVDSNFDTDIFQPLIQKTAAMAGVKYNDNVDSDVALKVIADHVRTVTFAIGDGVLPSNEGRGYVIRRLLRRAVRYGKMLGMNRPFMFELVETVGDIMGVYYPEVVDKRDFIIKVIKTEEERFHETLTDGLAILADISAQAKAEGRNVISGADAFKLYDTYGFPFDLTEDYADEQGLKVDREGFDEAMQEQRQRARDAHQDNASMKIQGGALSDLAVKSDFVGYNDLVTESKIVAIVYDDMLVESVSEGQSCQVVLDVTPFYAESGGQVSDHGLLRGGTVTAKVEGLFKAPQGQHVHQVVVEAGELNVGDTVKAEVDQASRGEIEKNHTATHLLHKALKEVLGDHVNQAGSLVEPGRLRFDFSHFGSITPEELADIELRVNRAIWSQLNVTIELKPIDEAKALGAMALFGEKYGDIVRVVKVGDYSIELCGGCHVSNTSQIGLFKLVSESGIGSGVRRIEAVTGRFGFEYMEGQLELLKVSAGLVKSKLSEVPKRIESLQQQIKDLSRENESLQSKLSAIEAGQLTDQVVQAGGVQLLAARVQASSMDALRAIADELKSKLPAAVLALGAAMDDKVNFVVVVPAEHTKTGLHAGKLVKEIAAVCGGGGGGRPDMAQAGGKDASKLDEALQRAHELVSAASQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6K3</accession>
    <name>E3E6K3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_20170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372835.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07420"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58263">
        <property type="protein sequence ID" value="ADO58263"/>
        <property type="gene ID" value="PPSC2_20170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4297"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_610901_0_0_9"/>
    <dbReference type="OMA" id="QGLMMAK"/>
    <dbReference type="OrthoDB" id="957193at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="46"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="487" mass="53895" checksum="9CDBC8C4508CC997" modified="2011-01-11" version="1">MKRLSTQRKHSKRLGKKGYWSGYNRGQEQGRKLGQASFGKIFEGVSIIIPSCNQLQQLRACIHHIEENTSHPHEIIVVDCGSTDGTPTYLLRKSIAVRYALLTKDVQMIGSLNQGLMMAKGTTIVVLDPNSMVTPGWLDRLMSCLYSDSRMGVVGPVTNGPFGEQQVEVPDMNKNEVRPFAMAHNIPNPDAWRETESLAAFCLLLRRETLVKTGYWDEGCHSIEEAHADWLLRVRLLGIRMTIAGDAFIHFVESDRDTVYGFPQTTERIGSTEEGSRNRSFFVQKWGDADKLFHHPEFGTAEPDGQGLSSKEAHLSAASFYPVGALVQGPSGAVFRIEPGSRRLLHEASAAGGKYVHPVRVSQLDLLALPLADEPEAMVSGAADAPPVAVAHEEPLPVLAAPELGNMSMLPTLHIPAQRKRWIELLYAEGGQLYQIGNGWKRPFLTLYAVMSWRAEDYPIQFLSSEELSALTEKQPIIAPPVLQGHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L6</accession>
    <name>E3E6L6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphatidylserine decarboxylase</fullName>
            <ecNumber evidence="3">4.1.1.65</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">psd</name>
        <name evidence="9" type="ORF">PPSC2_20225</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8">Phospholipid metabolism; phosphatidylethanolamine biosynthesis.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.65" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372848.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07480"/>
    <dbReference type="EnsemblBacteria" id="ADO58276">
        <property type="protein sequence ID" value="ADO58276"/>
        <property type="gene ID" value="PPSC2_20225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4310"/>
    <dbReference type="eggNOG" id="COG0688">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029061_4_0_9"/>
    <dbReference type="OMA" id="KDYHHYH"/>
    <dbReference type="OrthoDB" id="891720at2"/>
    <dbReference type="UniPathway" id="UPA00558"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004609">
        <property type="term" value="F:phosphatidylserine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006646">
        <property type="term" value="P:phosphatidylethanolamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003817">
        <property type="entry name" value="PS_Dcarbxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033177">
        <property type="entry name" value="PSD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10067">
        <property type="entry name" value="PTHR10067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02666">
        <property type="entry name" value="PS_Dcarbxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00163">
        <property type="entry name" value="PS_decarb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0865">Zymogen</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="265" mass="30140" checksum="B8DDB15502227D6A" modified="2011-01-11" version="1">MAKQWLRLMTELSSRKWVCRIVGSFAQSGASRLFIPTFIRTYQIQTHEAEQDWKEYRSLNAYFTRKLKAGMRPIDTNAEVMTSPVDARITFTGPITSGTLLNVKGQDYTLEELLNRSPRLEKYTHGYAFVLYLSPTDYHRIHAPVSGTLVEKEHLRGKVYPVNDFGLQHMRGVLSRNERQITYMAHEYGEVAVVKVGAMNVSSIKYTDEKAVSWTKGDDLAYFEFGSTVVLLTENGTFEPDPALKLGDVVKMGQRLGSFRHDSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6U4</accession>
    <name>E3E6U4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cell surface protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">surfB</name>
        <name evidence="5" type="ORF">PPSC2_21320</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
            <topology evidence="1">Peptidoglycan-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373064.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08550"/>
    <dbReference type="EnsemblBacteria" id="ADO58496">
        <property type="protein sequence ID" value="ADO58496"/>
        <property type="gene ID" value="PPSC2_21320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4532"/>
    <dbReference type="eggNOG" id="COG5386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092243_2_0_9"/>
    <dbReference type="OMA" id="LNHSEWT"/>
    <dbReference type="OrthoDB" id="1779914at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009274">
        <property type="term" value="C:peptidoglycan-based cell wall"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030492">
        <property type="term" value="F:hemoglobin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015886">
        <property type="term" value="P:heme transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06920">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019909">
        <property type="entry name" value="Haem_uptake_protein_IsdC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006635">
        <property type="entry name" value="NEAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037250">
        <property type="entry name" value="NEAT_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05031">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00725">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158911">
        <property type="entry name" value="SSF158911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03656">
        <property type="entry name" value="IsdC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50978">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168585" evidence="3">
        <location>
            <begin position="32"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="36"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="18928" checksum="143A7C05D2876F5A" modified="2011-01-11" version="1">MKKGYSAIIAVFLLVSVLSFWPTSSSVGAAAASPKLADGTYTLKYNILKAENDSVSMANDYFEKPAKLYVKKGQMTMQIKLNHSEWTTGFKVDYKGKIIDTKVIQKDAKTDTRTVQFPIASINSPLISKIHVTVPAYNYDHDYTIRFAFDSKSIKKVAAVQSAKSAKSSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6V8</accession>
    <name>E3E6V8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">KY</name>
        <name evidence="3" type="ORF">PPSC2_21390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373078.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08615"/>
    <dbReference type="EnsemblBacteria" id="ADO58510">
        <property type="protein sequence ID" value="ADO58510"/>
        <property type="gene ID" value="PPSC2_21390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4547"/>
    <dbReference type="eggNOG" id="COG5279">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052009_1_0_9"/>
    <dbReference type="OMA" id="NGQAHAW"/>
    <dbReference type="OrthoDB" id="1574236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168660" evidence="1">
        <location>
            <begin position="36"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="domain" description="TGc" evidence="2">
        <location>
            <begin position="176"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="375" mass="41989" checksum="7B16F22BE48C8498" modified="2011-01-11" version="1">MNRKIGVRLVKCLVAGAALAVLLPQAVEWGNNVYAASVKPTPSVSSQQLQNKLLQAMATRSETLTFTYQGRVNGLKQQLQTAIQQAMESDPYVNYTIKSYAFSYTGTTTSAQVTIRLSYRETKEQTAYVDSTVQAVLGDIITKGMTDHEKVKAIHDWIVVRLKYDEAQQKYTAYDGLKTGSTVCQGYSLLAYKMLERAGITNRIVEGRAGGQLHAWNLVLLDGRWYHMDTTWDDPTPDRANEVSTSYYLLTDSEMRRDHSWVKQYPQANTSYRETLSALIAAGGAKAAVYQKLYNNLEYPLQDGKGLVKSSADIKEQVRKMITKGETSITFGYQGTERSLKEDLQSLYQLGLKSISYQITDLGSTGNLRVTLKWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W0</accession>
    <name>E3E6W0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Ferrous iron transport protein B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">feoB</name>
        <name evidence="13" type="ORF">PPSC2_21395</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Probable transporter of a GTP-driven Fe(2+) uptake system.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373080.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08625"/>
    <dbReference type="EnsemblBacteria" id="ADO58512">
        <property type="protein sequence ID" value="ADO58512"/>
        <property type="gene ID" value="PPSC2_21395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4549"/>
    <dbReference type="eggNOG" id="COG0370">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013350_3_0_9"/>
    <dbReference type="OMA" id="PLGYDWK"/>
    <dbReference type="OrthoDB" id="304844at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015093">
        <property type="term" value="F:ferrous iron transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055072">
        <property type="term" value="P:iron ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01879">
        <property type="entry name" value="FeoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003373">
        <property type="entry name" value="Fe2_transport_prot-B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011640">
        <property type="entry name" value="Fe2_transport_prot_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041069">
        <property type="entry name" value="FeoB_Cyto"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030389">
        <property type="entry name" value="G_FEOB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011642">
        <property type="entry name" value="Gate_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07664">
        <property type="entry name" value="FeoB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17910">
        <property type="entry name" value="FeoB_Cyto"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02421">
        <property type="entry name" value="FeoB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07670">
        <property type="entry name" value="Gate"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00437">
        <property type="entry name" value="feoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51711">
        <property type="entry name" value="G_FEOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 11" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="11" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 11" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0410">Iron transport</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="273"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="343"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="387"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="421"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="451"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="512"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="610"/>
            <end position="631"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="638"/>
            <end position="660"/>
        </location>
    </feature>
    <feature type="domain" description="FeoB-type G" evidence="12">
        <location>
            <begin position="1"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU362098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="669" mass="73610" checksum="EB956B489EA6E6C8" modified="2011-01-11" version="1">MDMIALFGNPNTGKTSLFNKLTRTYAEVGNWSGVTVEKKTGILRDKSAVLVDLPGAYSLLPLSLDEGVATRYLLEEPPAALINIVDASQLQRNLYLTVQLLEYGRPLVLGLNMTDVADATGLRVNKELLADQLNVPIIPMVARTGSGSKQMLASLREVRHTSNAFQLDYGPAVEAAIADICSLLPHTSVPQLRWAALQCLENNPVVMEWMTNETLREQVTARIQRCEEELLREGYASTPAQHIRFVRTAWIAELCTKAVDTSKLRPHSLTDKLDALLTHRYLGIPIFLLLMYATFKFTFDWAGTILSDMLDEFFSGTLSSWITELLVQLNASAFTQSLVVDGIVAGVGGVLVFLPQIAILFLIISVIEDSGYMARVTILMDRLMQAVGLNGKSFIPFIIGFGCNVPAIMAARTIEQPRERLITTLLVPFMSCSARLPVYALFAGVFFPSHAASIIMLMYVLGIIVSLILAKIFSKVSILSGEPSLFIVELPPYRVPQALTLFRSTWEKVKGFVRKAGTIILAGSVGIWLLSNFGPQGFGVEMDDSLLATVGGWFAPLLAPLGFGTWQAGASLLTGFMAKEVVVSTMNIIYHVPDMQGLELQVRQAFTPLASFSFMVFILLYVPCLATVAVIRKETLSWRWTAFSVIYPLTVAYIIAVLIYQCGRLLGWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E735</accession>
    <name>E3E735_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Transcription termination/antitermination protein NusG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nusG</name>
        <name evidence="8" type="synonym">nusG3</name>
        <name evidence="8" type="ORF">PPSC2_22505</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Participates in transcription elongation, termination and antitermination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the NusG family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432596.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09970"/>
    <dbReference type="EnsemblBacteria" id="ADO58737">
        <property type="protein sequence ID" value="ADO58737"/>
        <property type="gene ID" value="PPSC2_22505"/>
    </dbReference>
    <dbReference type="GeneID" id="66575566"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4771"/>
    <dbReference type="eggNOG" id="COG0250">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067287_1_1_9"/>
    <dbReference type="OMA" id="DGPFNGF"/>
    <dbReference type="OrthoDB" id="2027986at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006354">
        <property type="term" value="P:DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00948">
        <property type="entry name" value="NusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006645">
        <property type="entry name" value="NGN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036735">
        <property type="entry name" value="NGN_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043425">
        <property type="entry name" value="NusG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001062">
        <property type="entry name" value="Transcrpt_antiterm_NusG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265">
        <property type="entry name" value="PTHR30265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265:SF2">
        <property type="entry name" value="PTHR30265:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02357">
        <property type="entry name" value="NusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00338">
        <property type="entry name" value="NUSGTNSCPFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00738">
        <property type="entry name" value="NGN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82679">
        <property type="entry name" value="SSF82679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00922">
        <property type="entry name" value="nusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 5 6" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="3 5 6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1 5 6" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="NGN" evidence="7">
        <location>
            <begin position="2"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="177" mass="20272" checksum="4C315428FC3677CA" modified="2011-01-11" version="1">MEKRWYVVHTYSGYENKVKANLEKRVESMGMEDKIFRVLVPMEEELVTKDGKKKTVMRKVYPGYVLVEMVQTDDSWYVVRNTPGVTGFVGSTGSGSKPTPLLPEEVEQILKHMGMVEPKPKIEFDVKESVRIKVGPFANFVGSVEEILVEKSKLKVHVNMFGRETPLELDYTQVEKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E758</accession>
    <name>E3E758_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Putative manganese efflux pump MntP</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mntP</name>
        <name evidence="9" type="synonym">ywlD</name>
        <name evidence="9" type="ORF">PPSC2_23330</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Probably functions as a manganese efflux pump.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the MntP (TC 9.B.29) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373449.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10820"/>
    <dbReference type="EnsemblBacteria" id="ADO58913">
        <property type="protein sequence ID" value="ADO58913"/>
        <property type="gene ID" value="PPSC2_23330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4940"/>
    <dbReference type="eggNOG" id="COG1971">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096410_1_0_9"/>
    <dbReference type="OMA" id="WHFGLFQ"/>
    <dbReference type="OrthoDB" id="1857762at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005384">
        <property type="term" value="F:manganese ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01521">
        <property type="entry name" value="MntP_pump"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003810">
        <property type="entry name" value="Mntp/YtaF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022929">
        <property type="entry name" value="Put_MntP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35529">
        <property type="entry name" value="PTHR35529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02659">
        <property type="entry name" value="Mntp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 8" id="KW-0464">Manganese</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="109"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="136"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="168"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="19480" checksum="0469C5669B8F6FA1" modified="2011-01-11" version="1">MLAASADAGQVVTILIMAVALGMDALSLGVGIGMKGIRLRDVLRISTVIGFFHILMPLLGMFTGHYMSSLLGHVTTYFAGGLLILLGGHMVYNSFKGDGVHVLDHRSPLGLLLFALGVSIDSFSVGVSLGMFQSDLVLTVLAFGFCGGAMAMLGLLLGRKVSRNLGDYGEAVGGAILLAFGFMFMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E772</accession>
    <name>E3E772_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">betI10</name>
        <name evidence="3" type="ORF">PPSC2_23400</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373463.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4988"/>
    <dbReference type="EnsemblBacteria" id="ADO58927">
        <property type="protein sequence ID" value="ADO58927"/>
        <property type="gene ID" value="PPSC2_23400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4954"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_12_3_9"/>
    <dbReference type="OMA" id="WPIFWRG"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="23"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="23136" checksum="5913D95F613AE8A2" modified="2011-01-11" version="1">MGMEEIRKAALFQFAANGYEGASLSSIAAEVGIRKPSIYAHFQGKEDLFLQVASYAFQEQNLRIFEYFTERKEQSLEHTLHNFLFWMEQEYEGNNSAKFMLRFSFFPPVSLYNEVLNIVNPFLEQMERKLTRRLRNVRDREPFGHMKPADVALAYMTLVDGIMVELLYSGSTNYHRRLNAAWPIFWRGITLTSPRER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7K7</accession>
    <name>E3E7K7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_13340</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the auxin efflux carrier (TC 2.A.69) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371415.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01030"/>
    <dbReference type="EnsemblBacteria" id="ADO56812">
        <property type="protein sequence ID" value="ADO56812"/>
        <property type="gene ID" value="PPSC2_13340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2842"/>
    <dbReference type="eggNOG" id="COG0679">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056175_4_0_9"/>
    <dbReference type="OMA" id="PHMFRNS"/>
    <dbReference type="OrthoDB" id="2033473at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="66"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="192"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="226"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="278"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="33633" checksum="467415FD94157B60" modified="2011-01-11" version="1">MFGTILLDVVLPIFVLIGFGCIMQYYFRLDLYTLAKINFYYITPAVVFTGLYNSEISLILMGEVSLFYALYIAILYVISTTVARSLKYSPGMRGAFTNSVMLDNSGNYGLPINQLVFKGDPLAISVQALIMTFQSFVTFTYGTFVVQNGKANTRKILINFLKMPVPYALVLGLLLNLLHSPLPNLLAEPLNYISHSMVAVALLTLGAQIVQYPFHLRRTAVYISMVLRLIAGPIVGFMLVFFLGLKGIPAQALLIASGMPTGVNTSILAEEYKNEPDFAAQTVLLSTIVNVITMTLLISISRHLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7K8</accession>
    <name>E3E7K8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Xyloglucanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">celZ</name>
        <name evidence="5" type="ORF">PPSC2_13345</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371416.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01035"/>
    <dbReference type="CAZy" id="CBM3">
        <property type="family name" value="Carbohydrate-Binding Module Family 3"/>
    </dbReference>
    <dbReference type="CAZy" id="GH74">
        <property type="family name" value="Glycoside Hydrolase Family 74"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56813">
        <property type="protein sequence ID" value="ADO56813"/>
        <property type="gene ID" value="PPSC2_13345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2843"/>
    <dbReference type="eggNOG" id="COG4447">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004180_1_0_9"/>
    <dbReference type="OMA" id="YSSWWPD"/>
    <dbReference type="OrthoDB" id="1293876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030248">
        <property type="term" value="F:cellulose binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005102">
        <property type="entry name" value="Carbo-bd_X2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008965">
        <property type="entry name" value="CBM2/CBM3_carb-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001956">
        <property type="entry name" value="CBM3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036966">
        <property type="entry name" value="CBM3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00942">
        <property type="entry name" value="CBM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03442">
        <property type="entry name" value="CBM_X2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01067">
        <property type="entry name" value="CBM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49384">
        <property type="entry name" value="SSF49384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51172">
        <property type="entry name" value="CBM3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168682" evidence="3">
        <location>
            <begin position="32"/>
            <end position="1023"/>
        </location>
    </feature>
    <feature type="domain" description="CBM3" evidence="4">
        <location>
            <begin position="872"/>
            <end position="1023"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1023" mass="108952" checksum="B8011AC53A15A6F1" modified="2011-01-11" version="1">MTKAKSRLRIVCLALIVAGASWTGMIAPTHAAPSDDYTWKSVVTGGGGGFVPGIIFNETEKDLIYARTDIGGAYRWNPASESWIPLTDSVGWEDWNKNGVDALATDPVDPNRVYIATGTYTNSWDKHNGQIMRSTDKGNTWQTTKLPFKVGGNMPGRSMGERLTIDPNKNNILFFGARSGNGLWKSSDFGATWSKVSGFPNPGTYVQDPSNEYTSDIVGLAWITFDKKTGSSSKATQTIYVGVADKKQSVYRSTDGGTTWSAVAGQPTGYLPHHGVLSPDGNLYISYSDGAGPYDGTKGELWKLNTASGQWTNISPVASSSADNHFGYGGLTVDAQKPGTLMVATLNAWWPDETIYRSTDSGATWSPIWEFDGYPSRKLKYNLDISGAPWLTFNANPAPPEVSPKLGWMIGDLEIDPFNSDHMLYGTGATIYGSKNLTNWDKGDKLDISVAAKGIEETAILDLVSPPTGAPLVSAVGDVSGFRHDDLFKAPAKMLDNPTFTSSESIDYAELNPSFMARVGKADYKKDPNAKSIGFSNDGGANWYKANSEPSGTAGGGSIAVAANGNGLLWSTSDKGVFYSKTGGNSWTASTGIPTNAKIASDRVNSNKYYAFAAGKIYVSVDGGASFTASTVTGLPSVGNADIGAVRGAEGDVWFAGGSEDGGPYGLWHSKDSGVTFTKLDHVQEADFVGFGKAAPNRTNAAVFIVGKIDGTRGFYRSDDTGANWVRINDDKHQYARVTTIIGDPRVYGRAYLGTNGRGILVADRVGGDQPSTGQASITPTAATYGVANGNSDITVKLTLNGNTLDAIKQGSVTLSKGEDYTVSGETVILTNKYLSKLPKGETTLNFHFSTGNDALFTITVKGDTPSEPGTGEGALKVQSFNGNISATSNTISSKFKITNTGSSPVSLADVTLRYYYTINGEKSQNFFTDWSSSGTENVIANFKALTNAKPSADSYAEIGFKSAAGSLEPGQSVELQTRISKADWSNYTQTDDYSFNPTANSLQDSTKITAYLSGIKQWGIEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Q3</accession>
    <name>E3E7Q3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spr5</name>
        <name evidence="4" type="ORF">PPSC2_13565</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371461.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2893"/>
    <dbReference type="EnsemblBacteria" id="ADO56858">
        <property type="protein sequence ID" value="ADO56858"/>
        <property type="gene ID" value="PPSC2_13565"/>
    </dbReference>
    <dbReference type="GeneID" id="66577267"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2887"/>
    <dbReference type="eggNOG" id="COG0791">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016043_8_1_9"/>
    <dbReference type="OMA" id="WKRAYWQ"/>
    <dbReference type="OrthoDB" id="682655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000064">
        <property type="entry name" value="NLP_P60_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00877">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51935">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168246" evidence="2">
        <location>
            <begin position="35"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="NlpC/P60" evidence="3">
        <location>
            <begin position="39"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="17874" checksum="F7326E65C10B0EF7" modified="2011-01-11" version="1">MNMHKIIKKVIIAGVAATIGFGTFAIEGTNTAQAATATTTVGQKVINYGKKYMGTPYKFGASTSTTRNFDCSSFMKHIFKKYGVDLPRTSVQQSKVGHAVSKANLKKGDLVFFSSGSRATGRNITHVAVYMGGGKILHTYGGPGVTISDLNSGNWKRTYIKARRVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T5</accession>
    <name>E3E7T5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371568.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01725"/>
    <dbReference type="EnsemblBacteria" id="ADO56968">
        <property type="protein sequence ID" value="ADO56968"/>
        <property type="gene ID" value="PPSC2_14070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3004"/>
    <dbReference type="eggNOG" id="COG4886">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054192_0_0_9"/>
    <dbReference type="OMA" id="ISWIQQS"/>
    <dbReference type="OrthoDB" id="1499307at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13516">
        <property type="entry name" value="LRR_6"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="259"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="31457" checksum="D3258F06F75FCC62" modified="2011-01-11" version="1">MEVKLVVDYEAYENGQTMAKSIEELAAKPESAQVTDLIIGDWGGAYENSPDDFIPVLVKLKDQFPKVRKLFIGDMEYDECEVSWINQTNLSPLLEAFPKLESLHIKGSQDLSLEPLRHNHLQELVIICGGLPVSVLQQIRNAELPELRKLELYLGVEDYGFDGKLEDILPFLDSNPFPKLTYLGLKDSEIQDEIAIAAANAPVIGQLEVLDLSQGTLSDQGAEALLASESIKGLKHLDLSYHYMSSEMMERWKNSGLSVNVEDQQEADEEDDWRYPSLTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7V2</accession>
    <name>E3E7V2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Serine protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ykwD</name>
        <name evidence="4" type="ORF">PPSC2_14155</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371585.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01810"/>
    <dbReference type="EnsemblBacteria" id="ADO56985">
        <property type="protein sequence ID" value="ADO56985"/>
        <property type="gene ID" value="PPSC2_14155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3021"/>
    <dbReference type="eggNOG" id="COG2340">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048111_0_0_9"/>
    <dbReference type="OMA" id="VNNERSQ"/>
    <dbReference type="OrthoDB" id="1705869at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014044">
        <property type="entry name" value="CAP_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014258">
        <property type="entry name" value="CAP_domain_YkwD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00188">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55797">
        <property type="entry name" value="SSF55797"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02909">
        <property type="entry name" value="spore_YkwD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168248" evidence="2">
        <location>
            <begin position="29"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="SCP" evidence="3">
        <location>
            <begin position="132"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="73"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="26794" checksum="E0099C101CE363CF" modified="2011-01-11" version="1">MKNMLKKTLVMGSLSAVLSAGFIVPASASPADDLSAQLQQWFQNNGYTVNMSNGTTTITKTVIKDYSEKDKAKTNTANPSSGKQTTNQASQKASKTVTKQQTQTQNANSGAGQSTDSNAQLSKSQFAAEVVKLVNNERSQKGLKPLTSNAKLTEVALAKAKDMSTNNYFSHTSPTYGSPFDMMKKFGVTYTYAGENIAMGQKTPQEVMKAWMNSQGHRENILKAEYTQIGVAYYNGYWVQEFTRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7V9</accession>
    <name>E3E7V9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutathione peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">bsaA3</name>
        <name evidence="7" type="ORF">PPSC2_14185</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glutathione peroxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371592.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01840"/>
    <dbReference type="EnsemblBacteria" id="ADO56992">
        <property type="protein sequence ID" value="ADO56992"/>
        <property type="gene ID" value="PPSC2_14185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3028"/>
    <dbReference type="eggNOG" id="COG0386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029507_2_2_9"/>
    <dbReference type="OMA" id="LAPFKGQ"/>
    <dbReference type="OrthoDB" id="1635499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004602">
        <property type="term" value="F:glutathione peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00340">
        <property type="entry name" value="GSH_Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000889">
        <property type="entry name" value="Glutathione_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029759">
        <property type="entry name" value="GPX_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029760">
        <property type="entry name" value="GPX_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592">
        <property type="entry name" value="PTHR11592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00255">
        <property type="entry name" value="GSHPx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000303">
        <property type="entry name" value="Glutathion_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01011">
        <property type="entry name" value="GLUTPROXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00460">
        <property type="entry name" value="GLUTATHIONE_PEROXID_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00763">
        <property type="entry name" value="GLUTATHIONE_PEROXID_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51355">
        <property type="entry name" value="GLUTATHIONE_PEROXID_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 5 7" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="6">
        <location>
            <begin position="1"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000303-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="181" mass="20902" checksum="953E55127C548242" modified="2011-01-11" version="1">MSIYDYSAIAMNGKEITLSDYKDKVVLIVNTASQCGFTFQYQDLQRLYDQYKDRGLVILGFPCNQFADQEPDSNESVQTFCTLNYGVAFPMFQKVNVRDEQAHPLFTYLASSLPFEGFDETHSVAKILIPLIHERHPEYLPGDSIKWNFTKFLIDRNGKVIKRFEATTDPLDMEEYIEALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E857</accession>
    <name>E3E857_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Stage 0 sporulation protein A homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">spo0A</name>
        <name evidence="13" type="ORF">PPSC2_15030</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with Spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. Repressor of abrB, activator of the spoIIa operon. Binds the DNA sequence 5'-TGNCGAA-3' (0A box).</text>
    </comment>
    <comment type="function">
        <text evidence="9">May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9 10">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="9 10">Binds 1 Ca(2+) ion per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371763.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E857"/>
    <dbReference type="STRING" id="1406.LK13_02650"/>
    <dbReference type="EnsemblBacteria" id="ADO57170">
        <property type="protein sequence ID" value="ADO57170"/>
        <property type="gene ID" value="PPSC2_15030"/>
    </dbReference>
    <dbReference type="GeneID" id="66576978"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3207"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072509_0_0_9"/>
    <dbReference type="OMA" id="TKELYPM"/>
    <dbReference type="OrthoDB" id="930905at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051606">
        <property type="term" value="P:detection of stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042173">
        <property type="term" value="P:regulation of sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014879">
        <property type="entry name" value="Spo0A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012052">
        <property type="entry name" value="Spore_0_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08769">
        <property type="entry name" value="Spo0A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002937">
        <property type="entry name" value="Res_reg_Spo0A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02875">
        <property type="entry name" value="spore_0_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0010">Activator</keyword>
    <keyword evidence="2 9 10" id="KW-0106">Calcium</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 9" id="KW-0678">Repressor</keyword>
    <keyword evidence="3 9" id="KW-0749">Sporulation</keyword>
    <keyword evidence="7 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 9" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4 9" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="12">
        <location>
            <begin position="5"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="58"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="11">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR002937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR002937-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="267" mass="29923" checksum="0914A7212DE1E9AD" modified="2011-01-11" version="1">MQKIEVLLADDNREFTNLLAEYISDQEDMEVTGIAFNGEEVLQRIAESRNIPDVLILDIIMPHLDGLGVLERLREMNLTPQPKIIMLTAFGQENITQRAVQLGASYYILKPFDMEVLANRIRQLVGPQLVSNSPVTVSSMRSNVVPMGKTKNLDASITAIIHEIGVPAHIKGYQYLREAITMVYNNIEILGAITKTLYPAIAEKFKTTASRVERAIRHAIEVAWTRGNIDSISHLFGYTINISKSKPTNSEFIAMVADKLRIENKVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E879</accession>
    <name>E3E879_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03160"/>
    <dbReference type="EnsemblBacteria" id="ADO57271">
        <property type="protein sequence ID" value="ADO57271"/>
        <property type="gene ID" value="PPSC2_15510"/>
    </dbReference>
    <dbReference type="GeneID" id="66576878"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3313"/>
    <dbReference type="eggNOG" id="ENOG5032QTV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1784988_0_0_9"/>
    <dbReference type="OMA" id="LKSYYSW"/>
    <dbReference type="OrthoDB" id="1662378at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="17339" checksum="CAF20759B5034F5A" modified="2011-01-11" version="1">MRDKAMQRWSTYEPFYVEMGDKKVADIVITNHAKTRYLDRVEQKQSETNHIAAWLWECLKQNRMESYYHNEEDVYLIDGDLVVVAEFGELPGEMDIAGNPLHKMIIITFLGRMSETIELRDLKSYYSWLRHSRRMTLMKSTRKQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E881</accession>
    <name>E3E881_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylbF</name>
        <name evidence="2" type="ORF">PPSC2_15520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371862.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03170"/>
    <dbReference type="EnsemblBacteria" id="ADO57273">
        <property type="protein sequence ID" value="ADO57273"/>
        <property type="gene ID" value="PPSC2_15520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3315"/>
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        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114090_0_0_9"/>
    <dbReference type="OMA" id="MSETIAY"/>
    <dbReference type="OrthoDB" id="1876289at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1500.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010368">
        <property type="entry name" value="Com_YlbF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023378">
        <property type="entry name" value="YheA/YmcA-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06133">
        <property type="entry name" value="Com_YlbF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158622">
        <property type="entry name" value="SSF158622"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="16367" checksum="787AC69DD9C0FB6F" modified="2011-01-11" version="1">MSVAELNTVNMAEVLINAYELGDMVNRSFEVSDYLYWKQRVELNPSIQACVRKLDAKKELFAETERFGHFHPNYHEAKDAVQAVELELEQFEAVKEFKRAEKALDDMLHAMSETIAYSVSETIKVPSNDPNVKKGGCGSGGKCSCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G4</accession>
    <name>E3E8G4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal RNA small subunit methyltransferase H</fullName>
            <ecNumber evidence="6">2.1.1.199</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">16S rRNA m(4)C1402 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">rRNA (cytosine-N(4)-)-methyltransferase RsmH</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rsmH</name>
        <name evidence="7" type="synonym">mraW3</name>
        <name evidence="7" type="ORF">PPSC2_16650</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>cytidine(1402) in 16S rRNA + S-adenosyl-L-methionine = H(+) + N(4)-methylcytidine(1402) in 16S rRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42928"/>
            <dbReference type="Rhea" id="RHEA-COMP:10286"/>
            <dbReference type="Rhea" id="RHEA-COMP:10287"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74506"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.199"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the methyltransferase superfamily. RsmH family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.199" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372098.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03985"/>
    <dbReference type="EnsemblBacteria" id="ADO57513">
        <property type="protein sequence ID" value="ADO57513"/>
        <property type="gene ID" value="PPSC2_16650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3553"/>
    <dbReference type="eggNOG" id="COG0275">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038422_2_0_9"/>
    <dbReference type="OMA" id="NPAKRTF"/>
    <dbReference type="OrthoDB" id="1272633at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071424">
        <property type="term" value="F:rRNA (cytosine-N4-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01007">
        <property type="entry name" value="16SrRNA_methyltr_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002903">
        <property type="entry name" value="RsmH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023397">
        <property type="entry name" value="SAM-dep_MeTrfase_MraW_recog"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11265">
        <property type="entry name" value="PTHR11265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01795">
        <property type="entry name" value="Methyltransf_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004486">
        <property type="entry name" value="MraW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81799">
        <property type="entry name" value="SSF81799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00006">
        <property type="entry name" value="TIGR00006"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 6 7" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="6">
        <location>
            <begin position="32"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="316" mass="35364" checksum="66DD90AAFB6B8340" modified="2011-01-11" version="1">MFHHITVLKEEATQALNIRQDGIYVDCTLGGAGHSSVIASQLGPEGRLIAFDQDDWALNNAREKLSAYEGKISLVKSNFRHLQDKLAELGLPEKDGVPQVQGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMDQSSSLTAYEIVNEWPEAEIARILFQYGEEKFSRRIAKIMVERRMNKPIHTTGELVDIIKEGIPAAARRTGGHPAKRSFQALRIAVNDELGALEDTLHQAVRCLAPGGRISVITFHSLEDRICKHIFKEYLAKSIYPSDLPILDDKMVGDLKLVNRKPIVASEQELELNPRSRSAKLRVAEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8W9</accession>
    <name>E3E8W9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YrzD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yrzD</name>
        <name evidence="1" type="ORF">PPSC2_19180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372642.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06380"/>
    <dbReference type="EnsemblBacteria" id="ADO58067">
        <property type="protein sequence ID" value="ADO58067"/>
        <property type="gene ID" value="PPSC2_19180"/>
    </dbReference>
    <dbReference type="GeneID" id="66576232"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4109"/>
    <dbReference type="eggNOG" id="ENOG503317Q">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_161841_1_1_9"/>
    <dbReference type="OMA" id="IWECVSE"/>
    <dbReference type="OrthoDB" id="2009930at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025716">
        <property type="entry name" value="Post-transcriptional_regulator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13797">
        <property type="entry name" value="Post_transc_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="9722" checksum="39F1BC71854991FB" modified="2011-01-11" version="1">MGMEELDEQDWDDAIEILCQSKADELILVGYEHVTSKDVWNCVSHKYEKEGIPPLHKLVNDILSLKATSFMNYLTMSALRGSTFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9A5</accession>
    <name>E3E9A5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371964.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03700"/>
    <dbReference type="EnsemblBacteria" id="ADO57378">
        <property type="protein sequence ID" value="ADO57378"/>
        <property type="gene ID" value="PPSC2_16010"/>
    </dbReference>
    <dbReference type="GeneID" id="66576773"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3420"/>
    <dbReference type="eggNOG" id="ENOG5032ZGE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_162633_0_0_9"/>
    <dbReference type="OMA" id="CTQMALL"/>
    <dbReference type="OrthoDB" id="1808561at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="12974" checksum="D14D50AAB22FBF90" modified="2011-01-11" version="1">MSQHPYTIEVDQVIKTVHMAVNGVFSQEEYDSFVKDYIAKTSSIQASNFTLRVDCTQMALLGPGEVEKLKGSFARYKETGFAKIIFVISLQQTIIKMQLGRVAREAGLNNVDIVVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9F9</accession>
    <name>E3E9F9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Transcriptional regulatory protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">dcuR</name>
        <name evidence="5" type="ORF">PPSC2_16995</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372172.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04330"/>
    <dbReference type="EnsemblBacteria" id="ADO57590">
        <property type="protein sequence ID" value="ADO57590"/>
        <property type="gene ID" value="PPSC2_16995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3629"/>
    <dbReference type="eggNOG" id="COG4565">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_39_0_9"/>
    <dbReference type="OMA" id="DVHGLQL"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024187">
        <property type="entry name" value="Sig_transdc_resp-reg_cit/mal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45526">
        <property type="entry name" value="PTHR45526"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006171">
        <property type="entry name" value="RR_citrat_malat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="3"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="3">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR006171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="26747" checksum="B329F34303AEAA0F" modified="2011-01-11" version="1">MINVLIVEDDPMVAEFNRKYMEQVEGFQCGGWASSVEEAKKYLAEQAIDLILLDVYMQESNGLDLLSFIRESGVNVDVIVISAASDMSSVKKAMNFGAVDYLIKPFHFNRFLEALTGYREHISIVRERSLLSQEELDRLIYHKSLTKDLARLPKGITKSTLAMIWNCIQQHHKVLFSTEDIAESAGISRVSMRKYLAFMTEIEVLSMETIYGTIGRPVYQYQVLPQAEGIINSYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9K5</accession>
    <name>E3E9K5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ypcH</name>
        <name evidence="7" type="ORF">PPSC2_17210</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372217.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04545"/>
    <dbReference type="EnsemblBacteria" id="ADO57636">
        <property type="protein sequence ID" value="ADO57636"/>
        <property type="gene ID" value="PPSC2_17210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3675"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="PTESTKM"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="MetI-like"/>
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        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
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    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
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        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="143"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="186"/>
            <end position="211"/>
        </location>
    </feature>
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        <location>
            <begin position="265"/>
            <end position="282"/>
        </location>
    </feature>
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            <begin position="76"/>
            <end position="282"/>
        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO57636.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="33540" checksum="85945E92954F0F3F" modified="2011-01-11" version="1">MAIKEDVYTRIFKVISYVVIIVASIACLLPFLLIISASLTSNESIIRDGYHFIPQQFSLEGYRTVFTFPEEVLRAYGVTIFTTVVGTTLGLFLMTMAGYVLARKDFKYRNAFSFYIYFTTLFGGGLVPWYIMLTKYLGLLDTYTVLIFPGLMTPFLIILMKNFIRSSMPEELFESAKIDGAGDFKIYYRIVLPLSTPGIATVGLFLALAYWNDWFSSSLFINDPHKYQLQYYLYNVINSMQFIAQMGAGTGVSLSNDMPTESTKMAMAIVVTGPILLLYPFIQRYFVKGLTIGAVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9T1</accession>
    <name>E3E9T1_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Peptidase M23</fullName>
        </submittedName>
    </protein>
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    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57871.1"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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        <property type="protein sequence ID" value="ADO57871"/>
        <property type="gene ID" value="PPSC2_18305"/>
    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="SSF55383"/>
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    </dbReference>
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    <keyword evidence="1" id="KW-0732">Signal</keyword>
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        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168274" evidence="1">
        <location>
            <begin position="32"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
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            <begin position="66"/>
            <end position="151"/>
        </location>
    </feature>
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            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="32661" checksum="6A6064B0FECDFC98" modified="2011-01-11" version="1">MKRKYFYSTAVVSFAVLVSAIFGTSSYNANATPINHSIHVNGTSLLKVNDYDVLYCTPIGPYVNEEKRLMVPLRSVVELLGVKVDYNGKLQEAKIKWNSNEIVFQKGAKTYKLNDTLAQMDTQPEVIQDAFVIPLGVLLRSMNIPFEYMNNKVILKNPAFDQSKIFQKVIELDQGRSIVDTPSALDIQNFKLVEEKNSASETRGIITVSGLNRTGSAIKEGKEDLHIIGFFNQTVEMDADFASVDIPDRKRPKVNQEDRVSQSLSYLKINDPLQYMLAAGRTLKTKNERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9W3</accession>
    <name>E3E9W3_PAEPS</name>
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        <submittedName>
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        </submittedName>
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        <name evidence="9" type="ORF">PPSC2_19390</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MreD family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06590"/>
    <dbReference type="EnsemblBacteria" id="ADO58096">
        <property type="protein sequence ID" value="ADO58096"/>
        <property type="gene ID" value="PPSC2_19390"/>
    </dbReference>
    <dbReference type="GeneID" id="66576190"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4137"/>
    <dbReference type="eggNOG" id="COG2891">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_121959_1_0_9"/>
    <dbReference type="OMA" id="WALAQYM"/>
    <dbReference type="OrthoDB" id="1613006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007227">
        <property type="entry name" value="Cell_shape_determining_MreD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04093">
        <property type="entry name" value="MreD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03426">
        <property type="entry name" value="shape_MreD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0133">Cell shape</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="69"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="103"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="137"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="20237" checksum="5FFE4F430E4CCE98" modified="2011-01-11" version="1">MKMRGQVLILLLFVLFIAEGTILPWLLPDSWHSRMVPNFVYVVILFVSVYYSRHTALVLGIVFGLIHDVVYYGFIIGPYSFAMGLSAYLLGLVFTARRAPMPIMMAAVLIGSFLLDSMLFAIDQLFQLNHQTFNWALAQYMIPDLFIHFLFALIIYVPVRKQLQRLGTRVKKEETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA58</accession>
    <name>E3EA58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqgC</name>
        <name evidence="2" type="ORF">PPSC2_20550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372920.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07805"/>
    <dbReference type="EnsemblBacteria" id="ADO58350">
        <property type="protein sequence ID" value="ADO58350"/>
        <property type="gene ID" value="PPSC2_20550"/>
    </dbReference>
    <dbReference type="GeneID" id="66575947"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4383"/>
    <dbReference type="eggNOG" id="COG2839">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_109297_0_1_9"/>
    <dbReference type="OMA" id="KWGQIGA"/>
    <dbReference type="OrthoDB" id="2021661at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007403">
        <property type="entry name" value="DUF456"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04306">
        <property type="entry name" value="DUF456"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="17168" checksum="0FB4423053218DB3" modified="2011-01-11" version="1">MDVVGWIVVIVLFIVGMAGAVYPVLPGALAIYFAFFVYGWFFSFAPYNALFWIIQTLIVVALFIADYAVNAWGVKRFGGSRLSAILSTVGIIIGPFVIPAFGLILGPFIGAVLGELIGKAPLDRAIKVGFGSVLGLFTSTVMKVILQLAMIIVFLIWVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA79</accession>
    <name>E3EA79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Globin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">trhbO</name>
        <name evidence="2" type="ORF">PPSC2_20645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372940.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07895"/>
    <dbReference type="EnsemblBacteria" id="ADO58371">
        <property type="protein sequence ID" value="ADO58371"/>
        <property type="gene ID" value="PPSC2_20645"/>
    </dbReference>
    <dbReference type="GeneID" id="66575928"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4404"/>
    <dbReference type="eggNOG" id="COG2346">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_103526_3_1_9"/>
    <dbReference type="OMA" id="QYWGGPT"/>
    <dbReference type="OrthoDB" id="1697277at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001486">
        <property type="entry name" value="Hemoglobin_trunc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01152">
        <property type="entry name" value="Bac_globin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="125" mass="14073" checksum="D3CEC5A31765CB37" modified="2011-01-11" version="1">MNPSLSIYDNLGGAEGIRAIIEAFYPRVYKDPLLSPLFPKDMEPVKEKQFMFLSQFFGGPSLFSDAYGHPMLRARHMKFPVTEERAEAWLSCMADALTDTGIEEPLRSIILSRLSGPAHHFVNTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAU6</accession>
    <name>E3EAU6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore germination protein KC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gerAC5</name>
        <name evidence="4" type="ORF">PPSC2_23795</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59010.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886065.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5071"/>
    <dbReference type="EnsemblBacteria" id="ADO59010">
        <property type="protein sequence ID" value="ADO59010"/>
        <property type="gene ID" value="PPSC2_23795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5035"/>
    <dbReference type="eggNOG" id="ENOG502Z9N7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051140_0_0_9"/>
    <dbReference type="OrthoDB" id="1421701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02887">
        <property type="entry name" value="spore_ger_x_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59010.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="413" mass="45650" checksum="512A2FE6F948B1DB" modified="2015-05-27" version="2">MYQGKRNEQSAVTFKGRIGRLCLVLLLFAPLLSGCWDSVELNQRAVVAGIGIDMVGESEYEVSLQVIVADEIAGAKARGDTPVVLYREKGKNLFQALRRASQRVPRVISMAHTKLVVIGEKLARAGIGETMDFLERSTEIRLPVKMLVVRGNTGKDVLAIMTAIGRIPANDISGKLETSERLYAGDYAVTIDDVIRSLSHKGGGPVLTGIGVNGNLEQAPSKSNVDNILPKAIVHINGMGVFKKDRLVRWLDDDRAIGLSMINNKVKSAQTTLSCGKNRETIGIETLFSATNIHTRMEQGEPIFVINLKQTGAIQEAECSINLQSPEAMKRLQEQWTEETKKMITSTVREVQHTRSDVIGFGLALERSYPKQWKRLSSDWSHYFAESTVRVQVTSVLKHTQSRTNPYSKGESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAX7</accession>
    <name>E3EAX7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373576.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5103"/>
    <dbReference type="EnsemblBacteria" id="ADO59041">
        <property type="protein sequence ID" value="ADO59041"/>
        <property type="gene ID" value="PPSC2_23935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5064"/>
    <dbReference type="eggNOG" id="ENOG5030R13">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_167557_0_0_9"/>
    <dbReference type="OMA" id="WFIDSEV"/>
    <dbReference type="OrthoDB" id="1765062at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="12918" checksum="3CC3F08DF232C8E7" modified="2011-01-11" version="1">MNIPFKLCLILFMGPLILAGCGSSVSQEKELITVATPIGVEFIKEHYNADFILKDYTVDDPAVHSRIYLYGYIKGHEDSKITIYYSYKTKEVIDVSGPDWFIDSEVPKYKTPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAX9</accession>
    <name>E3EAX9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373578.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11440"/>
    <dbReference type="EnsemblBacteria" id="ADO59043">
        <property type="protein sequence ID" value="ADO59043"/>
        <property type="gene ID" value="PPSC2_23940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5066"/>
    <dbReference type="eggNOG" id="COG3501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030496_2_0_9"/>
    <dbReference type="OMA" id="HSALWHE"/>
    <dbReference type="OrthoDB" id="1880900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="464" mass="52804" checksum="2107021F38FC78E4" modified="2011-01-11" version="1">MGYPIIKYNGTVLSLKNPKIKVVQKMNEHVKVFLTGVLTGAQMEEYTDHMEAGAKLVVSYMNDDHNQSVLFRGPVTQFRIKMVSNVAHLVVEALSYTSQMDEIPHRQSFQNVKMKLQALLEHVLKSYPKANCTSRLKDQLLQEFTMQFDETDWSFLKRIASRLGWGLIPDPIGEKPQFYFGLPDGVNQGDLRQYNYSMTRKTKPGASKDDNLLYYKVQTTGARDALLQIGAEVKFKGKALYVLQSVAFIRHSALWHEYVLTTLDGMKQDLIVNESIRGISLKSKVIGIEQDHVKVFFYEMDKVKPNVKETYAFPTATFYTSEGNTGWYCMPELFDFVDIYFPTAKEKDAIVTHSIRKRSKGGDFIQDPSTKIFMTKYRKAIIFEKNEILITGNDDEVVIRLLDDHGIELRSKKDIRVKADGNLVLNAGNTIQVTAKDAIGLKCKTSLVEMDGNIKMTGEKIKTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBA1</accession>
    <name>E3EBA1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">blt9</name>
        <name evidence="10" type="ORF">PPSC2_20945</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. TCR/Tet family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373002.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4484"/>
    <dbReference type="EnsemblBacteria" id="ADO58433">
        <property type="protein sequence ID" value="ADO58433"/>
        <property type="gene ID" value="PPSC2_20945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4467"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_11_9"/>
    <dbReference type="OMA" id="LYADSFH"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="44"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="135"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="217"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="253"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="284"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="308"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="347"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="370"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="10"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="408" mass="43777" checksum="01705C00122B0D82" modified="2011-01-11" version="1">MSILTRNRGAMLLLMLNIFLAFMGIGLVVPVLPKFISELGMNGSSMGLMVAAFALTQLLLSPLSGKLSDRYGRKKLIVSGMFIFMLSELVFGLASSVPTLFVARIMGGVGAALLTPSIMAYVADVTSFEERGKGMGMINAAINTGFIIGPGIGGLLAAYGIRIPFFAAAGAAGIAAILSLLVLPESLSKEKQQYNRELPREKENLLQQFAKSYQSPYFMGLLIVFVVAFGLANFETVFGLFVDHKYGFTPMDIAIIITTGSILGAVVQATIFGWIINRFGEKKVIHLCLAIGGLFIFLTLFAEQYVMIMLTTFIIFLAMDILRPAVSTSLSRQAGDEQGFVAGMNSSYTSLGNVIGPLIAGLLFDVHINMPYMVAAVALFACLVLSLRAKHAGKRHSTSLAAEQHRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBD4</accession>
    <name>E3EBD4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Nucleoside permease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">nupC</name>
        <name evidence="10" type="ORF">PPSC2_21850</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373175.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08995"/>
    <dbReference type="EnsemblBacteria" id="ADO58608">
        <property type="protein sequence ID" value="ADO58608"/>
        <property type="gene ID" value="PPSC2_21850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4648"/>
    <dbReference type="eggNOG" id="COG1972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016813_0_0_9"/>
    <dbReference type="OMA" id="WFFLNSN"/>
    <dbReference type="OrthoDB" id="437016at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005337">
        <property type="term" value="F:nucleoside transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008276">
        <property type="entry name" value="C_nuclsd_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018270">
        <property type="entry name" value="C_nuclsd_transpt_met_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011657">
        <property type="entry name" value="CNT_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002668">
        <property type="entry name" value="CNT_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011642">
        <property type="entry name" value="Gate_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10590">
        <property type="entry name" value="PTHR10590"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07670">
        <property type="entry name" value="Gate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07662">
        <property type="entry name" value="Nucleos_tra2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01773">
        <property type="entry name" value="Nucleos_tra2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00804">
        <property type="entry name" value="nupC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="165"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="192"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="275"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="332"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="373"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="domain" description="Nucleos_tra2_N" evidence="7">
        <location>
            <begin position="8"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="Gate" evidence="9">
        <location>
            <begin position="91"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="Nucleos_tra2_C" evidence="8">
        <location>
            <begin position="192"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF07670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="392" mass="42366" checksum="72DE4972E03E7031" modified="2011-01-11" version="1">MKYVIALVGLLVVFALTYVASSDKRKIRYRPLIVMVVLQAALAFVLLNTEIGEILVKGFAKGFNSLIGYAMEGINFVFGGIANEGAAPFFIGVLLPIVFISALIGILQYVKVLPFIIKYIGLVLSKVNGMGKLESYNAVASAILGQSEVFISVKKQIGLLPKHRLYTLCASAMSTVSMSIVGAYMQMLNPKYVVTALVLNLFGGFIIASIINPYKIEKEDDLLEVQEEEKQSFFEMLGEYIMDGFKVAITVAAMLIGFVALIAMVNGIFSWLFGISFQALLGYVFAPFAFVMGIPWNEAVQAGSIMATKLVSNEFVAMLDLTKQTGLSERTIGIVSVFLVSFANFSSIGIISGAVKGLHEKQGNVVARFGLKLLYGATLVSVLSATIAGLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBK7</accession>
    <name>E3EBK7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">N-acetyl-gamma-glutamyl-phosphate reductase</fullName>
            <shortName evidence="5">AGPR</shortName>
            <ecNumber evidence="5">1.2.1.38</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">N-acetyl-glutamate semialdehyde dehydrogenase</fullName>
            <shortName evidence="5">NAGSA dehydrogenase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">argC</name>
        <name evidence="8" type="ORF">PPSC2_22930</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>N-acetyl-L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + N-acetyl-L-glutamyl 5-phosphate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:21588"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29123"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57936"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.38"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 3/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.38" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373363.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10405"/>
    <dbReference type="EnsemblBacteria" id="ADO58825">
        <property type="protein sequence ID" value="ADO58825"/>
        <property type="gene ID" value="PPSC2_22930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4855"/>
    <dbReference type="eggNOG" id="COG0002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006384_0_1_9"/>
    <dbReference type="OMA" id="PHLTPMI"/>
    <dbReference type="OrthoDB" id="951261at2"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00108"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003942">
        <property type="term" value="F:N-acetyl-gamma-glutamyl-phosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00150">
        <property type="entry name" value="ArgC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023013">
        <property type="entry name" value="AGPR_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000706">
        <property type="entry name" value="AGPR_type-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000534">
        <property type="entry name" value="Semialdehyde_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012280">
        <property type="entry name" value="Semialdhyde_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01118">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02774">
        <property type="entry name" value="Semialdhyde_dhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00859">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01850">
        <property type="entry name" value="argC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01224">
        <property type="entry name" value="ARGC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1 5" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0521">NADP</keyword>
    <keyword evidence="4 5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Semialdhyde_dh" evidence="7">
        <location>
            <begin position="6"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="active site" evidence="5 6">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="349" mass="37818" checksum="82730A3117F52292" modified="2011-01-11" version="1">MSSKLKVAIVGSTGYGGVELIRFLVHHPQVEIVSVISSSSAGVPISDGFPHLTDIVMQDLDGVDIHEIAAKADLVFTATPSGVSTQLVPQLLDAELKVIDLSGDFRLRSGEVYEAWYKKPAASPEYLKQAVYGLSEVYAEKLAGVSFISNPGCYPTATLLGIIPALEAGWIDHRSLIVDAKSGVSGSGRGTSLVSHYAEMNENFKAYKVNKHQHIPEIEQVLGDVADEDVTITFTTQLVPMTRGIMSTIYVTLKGDHTDQDLIGLYRNYYKGHPFVRVRGEGIWPATKEVFGSNYCDIGFAADARTGRLTIISVIDNVVKGAAGQAIQNLNLMMGWEENLGLGFIPVYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBP8</accession>
    <name>E3EBP8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RND_mfp</name>
        <name evidence="6" type="ORF">PPSC2_23110</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373404.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10595"/>
    <dbReference type="EnsemblBacteria" id="ADO58866">
        <property type="protein sequence ID" value="ADO58866"/>
        <property type="gene ID" value="PPSC2_23110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4895"/>
    <dbReference type="eggNOG" id="COG0845">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_14_4_9"/>
    <dbReference type="OMA" id="NRQYRIR"/>
    <dbReference type="OrthoDB" id="1432684at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169041" evidence="4">
        <location>
            <begin position="32"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="5">
        <location>
            <begin position="66"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="152"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="104"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="469" mass="49611" checksum="AA702634C0446D0C" modified="2011-01-11" version="1">MNKQRAIIILTLSLSLAITGCSTGKKDAASGSSAQPTVVRTTVVKNTPLHTAYDLSGTLQAYEERTLAFQNGGTVASAEITTGTLVQKGTTIARLDDADYRLQVAQATASIQEALAGIDNAQANLQAATSAIQSADAGIANARANVSKVNKGARAQEKQQAQTTVDKAQSAYNKAKTDSERTQKLFEAGAATASDNENARLNTTTALQNLEQAKASLSLLLEGATAEEHQSVQASFQNAIAGKTKALAASEQAEASQKQARANYEKALVAKDQAELALSRTRLASPVNGVILDKIVNTGDLVASGQAVYRIGSIDRLKVLLPVPDSEIKDWKKGQQVKVALYEETRQGTVSNVYPSTSTDTGRVNVEIVIANPQRDWLPGQVIKAAHQVTDKNGILVPAEAVINTGSKPFIFKDVQGKAVRTPVELGNQVVDNQLQIVSGLREGERIVIKGAESLFDGNAIQSEEGGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECE1</accession>
    <name>E3ECE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_01480</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0299"/>
    <dbReference type="EnsemblBacteria" id="ADO54284">
        <property type="protein sequence ID" value="ADO54284"/>
        <property type="gene ID" value="PPSC2_01480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.293"/>
    <dbReference type="HOGENOM" id="CLU_2317604_0_0_9"/>
    <dbReference type="OrthoDB" id="1582456at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="10588" checksum="1B676C7B56AA4656" modified="2011-01-11" version="1">MTVNDVMKISSIDRSSLASDPVSFKAGIGLADRGLGKHLALELLKRGAKVYTGAINPDSVVAATKVAKNVRSLRNNLLSKDRFSSFYLSVNNGLTYSDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECH8</accession>
    <name>E3ECH8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">scrR</name>
        <name evidence="6" type="ORF">PPSC2_01650</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368963.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14420"/>
    <dbReference type="EnsemblBacteria" id="ADO54321">
        <property type="protein sequence ID" value="ADO54321"/>
        <property type="gene ID" value="PPSC2_01650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.330"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_0_9"/>
    <dbReference type="OMA" id="SHCVWSD"/>
    <dbReference type="OrthoDB" id="664909at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="3"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="37562" checksum="8BF3E61149BF2E64" modified="2011-01-11" version="1">MNKTIADIAQMAGVSKSTVSRFLNGGSVSLDTRRKIEKVVKATGYVPNTFAQSLKAKRTNIIGTVVPRLDSFATSHTLMGIDEELRSQHYQMLISNTSQDVKREIEAIYEFARQKISGIILLAAQITDDHLTAIRDISIPVLLVGQQHEQIHSLIHDDYRAGYDIGAYVLSQGHREIAYVGVTERDVAVGVQRKEGFRQAVHDALPAACYTDEAMRAAGYDIRYYETGFKMSDARIAASAILDKFKPSLMVCATDNIALGVINAAYSRGITIPSDLSVTGFGGYDITEVIHPALTTVQYPYMEAGRVAAQNIVRLVEHKTVEQVTVMDYSLIERESVDKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECJ0</accession>
    <name>E3ECJ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhfO</name>
        <name evidence="2" type="ORF">PPSC2_01710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368973.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54333">
        <property type="protein sequence ID" value="ADO54333"/>
        <property type="gene ID" value="PPSC2_01710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.342"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_19_1_9"/>
    <dbReference type="OMA" id="TVVMGRF"/>
    <dbReference type="OrthoDB" id="1809950at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="29"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="181" mass="20498" checksum="AB0609158217537F" modified="2011-01-11" version="1">MKINKQEFNVEGVSYTIRSAMIQDAMNLSEIRVLIDGETENLDREKGEAFISTSGFEQLIKADTEHAKNLFLVAVVHDKVVGFSRCEGHLLRRFAHKVEFGVCVLKDFWGYGIGTNLLKKSISWADSNGIQKMTLQVLETNNKAIALYKKHGFEIEGVLKNDKILSDGQYYNTILMGRIHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECJ2</accession>
    <name>E3ECJ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">M1-488</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-488</name>
        <name evidence="3" type="ORF">PPSC2_01715</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368975.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0351"/>
    <dbReference type="EnsemblBacteria" id="ADO54335">
        <property type="protein sequence ID" value="ADO54335"/>
        <property type="gene ID" value="PPSC2_01715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.344"/>
    <dbReference type="eggNOG" id="ENOG50338GV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1413957_0_0_9"/>
    <dbReference type="OMA" id="NGPKIAG"/>
    <dbReference type="OrthoDB" id="1771713at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168136" evidence="2">
        <location>
            <begin position="32"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="147"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="190" mass="19224" checksum="91CF8B894DD0672C" modified="2011-01-11" version="1">MKSTKKAILAGTLALAFLGGGALYSTSAAHAASTTPDASTANKAQAPKGNPGDANGPQIAGGNYAENKALLKLLKLSSSQLDTQLKAGKSLATIATAQGVSVNSVIDVMVSDMKSKLATEKQNGKITASEYNQRVSNLKQMITDMVNGVKPSKPPVDGAKGETGKAPAKTDAAAKAPAKTNTAKASAKQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED52</accession>
    <name>E3ED52_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutamine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glnP1</name>
        <name evidence="8" type="ORF">PPSC2_02205</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369049.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14970"/>
    <dbReference type="EnsemblBacteria" id="ADO54409">
        <property type="protein sequence ID" value="ADO54409"/>
        <property type="gene ID" value="PPSC2_02205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.418"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_1_0_9"/>
    <dbReference type="OMA" id="WQSMKLV"/>
    <dbReference type="OrthoDB" id="1523519at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="19"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="23952" checksum="6055598576398E31" modified="2011-01-11" version="1">MDFGGLFAWPNVRFILEGFLLTLEVAIYSIIFSFALGIVFGILRYTRIPVLSQVAAFIIDLIRNLPLLLIIFFIGMVLPSIGLSISLKWAAITGLSIFEGAMIAEIVRSGLNSVHKGQLEAARSSGLSYSQTLWHIILPQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHNIQIVGGQNQSFVIPALLFAAFLYFAVNYSMSLIARRLEVRTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDH9</accession>
    <name>E3EDH9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glycoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">bglB</name>
        <name evidence="6" type="ORF">PPSC2_04780</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the glycosyl hydrolase 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369591.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17675"/>
    <dbReference type="CAZy" id="GH3">
        <property type="family name" value="Glycoside Hydrolase Family 3"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54958">
        <property type="protein sequence ID" value="ADO54958"/>
        <property type="gene ID" value="PPSC2_04780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.961"/>
    <dbReference type="eggNOG" id="COG1472">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004542_4_2_9"/>
    <dbReference type="OMA" id="VEPAYEF"/>
    <dbReference type="OrthoDB" id="949956at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102483">
        <property type="term" value="F:scopolin beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1700">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026891">
        <property type="entry name" value="Fn3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019800">
        <property type="entry name" value="Glyco_hydro_3_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002772">
        <property type="entry name" value="Glyco_hydro_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036881">
        <property type="entry name" value="Glyco_hydro_3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001764">
        <property type="entry name" value="Glyco_hydro_3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036962">
        <property type="entry name" value="Glyco_hydro_3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037524">
        <property type="entry name" value="PA14/GLEYA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011658">
        <property type="entry name" value="PA14_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14310">
        <property type="entry name" value="Fn3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00933">
        <property type="entry name" value="Glyco_hydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01915">
        <property type="entry name" value="Glyco_hydro_3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07691">
        <property type="entry name" value="PA14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00133">
        <property type="entry name" value="GLHYDRLASE3"/>
    </dbReference>
    <dbReference type="SMART" id="SM01217">
        <property type="entry name" value="Fn3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00758">
        <property type="entry name" value="PA14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52279">
        <property type="entry name" value="SSF52279"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00775">
        <property type="entry name" value="GLYCOSYL_HYDROL_F3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51820">
        <property type="entry name" value="PA14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168154" evidence="4">
        <location>
            <begin position="31"/>
            <end position="909"/>
        </location>
    </feature>
    <feature type="domain" description="PA14" evidence="5">
        <location>
            <begin position="468"/>
            <end position="624"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="909" mass="98676" checksum="09F64EFB67041EC7" modified="2011-01-11" version="1">MKVKSTWLFRMVMMTVIAAVVIGPMHIAGAAGSRTDRPWMNTSLSAEKRTALLLQEMTLEEKIDLVTGKVNNYYGFYNNSMERLGIPALKMADGPAGVRIANPDVQDKQSTALPAPIALAATWDTQAAKQYGDLIGDEAFNTTHNVVLGPGMDIARIPWGSRNFESMGEDPLLQSQMATAYVKGVQSHPVLATAKHYLMNNQETERFTTNVKVSDRALHEIYIRPFQEAIAKADLGGAMCSFNKVNGESACENKTILTDLLKKEMQFKGFVMSDYGANLSTVESANSGLDLETPGTPYDKWGDQLLDAVKNGKVSEQTIDDKAKRILVQMFSKGLFDHPAQNNQIDARDHGKTARQLAEESMVLLQNKNNVLPLSQDKLKSIAVIGPDADSGTVAGGGSSLVNPTYTVSPLEGIRNRVGKGVTVKYAPGTDPISAGDIMPGPSAVPSSLLTTSDQKENVSVGYATYGDAEQGLRGEYWTNNKMEGNPILVRNDDQVNMNLGFYNYQGFNAKSPKVPNTPTTLNGLISARWTGAIAAPKDGDYALSLTSLGSSKLYLDDKLFVDNQGTKLGTTKKNISLKAGEKHKIRIEYRADYPTNGRDSGGMVRLGWEPPADMTDKLIDNAVKLAKKSDVAIVVTRTYESEGYVERSDMELPNNQDRLIRAVAAANPKTIVVQMSGRAVQMDTWQDKVPAIVQAWFAGQEQGNAIARVLFGDVNPSGKLPVTFPVNEQSTPVSSPEKFPGVNGVGDYSDGIFVGYRGYEKSGIQPAFSFGHGLSYTTFGYSDLKVKQHASGKKSDRTSSVEISLKLKNTGKTAGAEVVQVYSGKLPTNVETPSRQLAGWAKVELKPGQEKKVRIELDPKALSYWDEKSKAWVMPSGEVPIYVGSSSQDTRLTGSVTIPATSTEKAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDI0</accession>
    <name>E3EDI0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Beta-1,6-glucanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">srfJ3</name>
        <name evidence="8" type="ORF">PPSC2_04785</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369592.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17680"/>
    <dbReference type="CAZy" id="GH30">
        <property type="family name" value="Glycoside Hydrolase Family 30"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54959">
        <property type="protein sequence ID" value="ADO54959"/>
        <property type="gene ID" value="PPSC2_04785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.962"/>
    <dbReference type="eggNOG" id="COG5520">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014379_3_1_9"/>
    <dbReference type="OMA" id="WIDWNII"/>
    <dbReference type="OrthoDB" id="447059at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004348">
        <property type="term" value="F:glucosylceramidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006665">
        <property type="term" value="P:sphingolipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033452">
        <property type="entry name" value="GH30_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001139">
        <property type="entry name" value="Glyco_hydro_30"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033453">
        <property type="entry name" value="Glyco_hydro_30_TIM-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11069">
        <property type="entry name" value="PTHR11069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02055">
        <property type="entry name" value="Glyco_hydro_30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17189">
        <property type="entry name" value="Glyco_hydro_30C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00843">
        <property type="entry name" value="GLHYDRLASE30"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_30" evidence="6">
        <location>
            <begin position="94"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_30C" evidence="7">
        <location>
            <begin position="438"/>
            <end position="498"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF17189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="505" mass="56060" checksum="C24D7E7B5C6C5100" modified="2011-01-11" version="1">MKKLPKQRRSDFFLLIVAAIILIGAILISLAMQNGVNTAGERNVSMWLTTPDPANRLTQQAPIPWRKDNSNEVAANADTLTVEIRPDIRYQTMEGFGAAVSGSSAYLMNHGMSANQRDQLLNDLFTAGGIQLSYIRHTIGASDYSVDEQGQPSNYTYDDVATGKDYELNHFSIAKDRDVIDVLKQILRRNQDLWIMGTPWTAPPWMKYGEQIYNGWYLDYTDPRVYQAYADYFVRYIQAYANEGIPIQAISIQNEPEFTTSKYPSMSMGAVEQAKFIKQYLGPALSRNDLSTHIIAFDHNWDTGSEYAKTVLGDEQARSYTHGTAFHCYKGEPTAMSDVHNAFPDKPVYMTECSGGAWSPGFGDDLSWDMSKLIIGAPRNWSQNVLFWNIALDPSGGPTNGGCTNCRGVVTIDPLSGAVTKNVEYYAIGHASKFVRPGAVRINSSHYSGSIETVAYRNPDGTLILIAANTGENTKTFKVRQGNQVFKSTLPSKSAATFQWKPTTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDI3</accession>
    <name>E3EDI3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tetR3</name>
        <name evidence="7" type="ORF">PPSC2_04800</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">TetR is the repressor of the tetracycline resistance element; its N-terminal region forms a helix-turn-helix structure and binds DNA. Binding of tetracycline to TetR reduces the repressor affinity for the tetracycline resistance gene (tetA) promoter operator sites.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369595.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0980"/>
    <dbReference type="EnsemblBacteria" id="ADO54962">
        <property type="protein sequence ID" value="ADO54962"/>
        <property type="gene ID" value="PPSC2_04800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.965"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069543_2_0_9"/>
    <dbReference type="OMA" id="HEPDIIR"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004111">
        <property type="entry name" value="Repressor_TetR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003012">
        <property type="entry name" value="Tet_transcr_reg_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02909">
        <property type="entry name" value="TetR_C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00400">
        <property type="entry name" value="TETREPRESSOR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="6">
        <location>
            <begin position="7"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="5">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="226" mass="26531" checksum="A2D1DC13564C9C5E" modified="2011-01-11" version="1">MKKQQPQISEDKILEASWELLGEDGIEKFSLRRLADRLGIQAPSLYWYFKSKQNLYQRLANQVSRLILEEFHSEGDWKEQLKELAITVRSVLIRYPCSTQLMMLTLPHEPDIIRFTNRMLLCVESTPLEEEQKMQVVTTLVNYVFYFVMDDYQHQRNVSAILKDQETPPGEELIRLLDSMSDTDVGLFRRTFTNGMFKLMGTDRAFEFGLKVILLGIEQVIKEQQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDT0</accession>
    <name>E3EDT0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">DNA gyrase subunit A</fullName>
            <ecNumber evidence="8">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gyrA</name>
        <name evidence="12" type="synonym">gyrA1</name>
        <name evidence="12" type="ORF">PPSC2_00040</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="8">Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the topoisomerase GyrA/ParC subunit family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the type II topoisomerase GyrA/ParC subunit family.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368650.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13055"/>
    <dbReference type="EnsemblBacteria" id="ADO53996">
        <property type="protein sequence ID" value="ADO53996"/>
        <property type="gene ID" value="PPSC2_00040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.8"/>
    <dbReference type="eggNOG" id="COG0188">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002977_6_1_9"/>
    <dbReference type="OMA" id="THHWLLF"/>
    <dbReference type="OrthoDB" id="217468at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034335">
        <property type="term" value="F:DNA negative supercoiling activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00187">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.268.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.199.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01897">
        <property type="entry name" value="GyrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005743">
        <property type="entry name" value="GyrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013758">
        <property type="entry name" value="Topo_IIA_A/C_ab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013757">
        <property type="entry name" value="Topo_IIA_A_a_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002205">
        <property type="entry name" value="Topo_IIA_dom_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00521">
        <property type="entry name" value="DNA_topoisoIV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00434">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="TOP4c" evidence="11">
        <location>
            <begin position="12"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="816"/>
            <end position="854"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="417"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GyrA-box" evidence="8">
        <location>
            <begin position="525"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="840"/>
            <end position="854"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-tyrosine intermediate" evidence="8">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO53996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="854" mass="95760" checksum="C928C8ECA111C3EB" modified="2011-01-11" version="1">MADQNNSQIINRDIGVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMSPDKPYKKSARIVGEVIGKYHPHGDTAVYDTMVRMAQDFSLRYMLVDGHGNFGSVDGDMAAAMRYTEARLSKIAMEMLRDLNKETVDFMPNYDGEENEPVVLPARYPNLLVNGVGGIAVGMATNIPPHNLGEVIDGVQALIENPDITPMELMDYIQGPDFPTAGYILGRSGIRQAYQTGRGSVTMRAKTTIEEIGNKARIIVHELPYQVNKARLVEKIAELVRDKRIEGITDLRDESDRTGMRIVIELRRDVNPNVVLNNLFKHTAMQSNFGINMLAIVNNEPKILNLKDVLYYYLKHQIEVIRRRTEFDLKKAEARAHILEGLRIALDHLDEVISLIRSSQTAEAAREGLIERFSLTLEQAQAILDMRLQRLTGLEREKIENEYNELIQKIMEYREILANEHLVLNIISEELNELKGRFADDRRTEITVGEESILDEDLIPREDVIITVTHTGYIKRLPVTTYRSQKRGGRGVVGMDTKDEDFVEHLFITNSHHHLLFFTDKGKVYRIKAYEIPDLSRTARGTPIINLIQIEQGESINAVIPIEEFVEDSYLFFATQHGIIKKTPLDDYANIRKGGLIAINLREDDALIEVKLTDGQQEMIIGTAQGMSIRFPESDVRSMGRSATGVKGISLDESDAVIGMDIVNTDLDILIVTAKGYGKRTPAVDYRIQSRGGKGIKTINVTDKNGPVVGLKVVKAEEDLMIITASGTLIRTSMGEISTMGRNTQGVRLINIRDDDSVATVCRANKNEEQDELLEDLLEDGGTGEEPTLSSAEPTLEVNTEDTEGNDSESSEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDT7</accession>
    <name>E3EDT7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Amino acid decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yaaO</name>
        <name evidence="4" type="ORF">PPSC2_00080</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Orn/Lys/Arg decarboxylase class-I family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368657.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13095"/>
    <dbReference type="EnsemblBacteria" id="ADO54003">
        <property type="protein sequence ID" value="ADO54003"/>
        <property type="gene ID" value="PPSC2_00080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.15"/>
    <dbReference type="eggNOG" id="COG1982">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025925_2_0_9"/>
    <dbReference type="OMA" id="NCHKSVF"/>
    <dbReference type="OrthoDB" id="485164at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00615">
        <property type="entry name" value="Orn_deC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000310">
        <property type="entry name" value="Orn/Lys/Arg_deCO2ase_major_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008286">
        <property type="entry name" value="Prn/Lys/Arg_de-COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01276">
        <property type="entry name" value="OKR_DC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03711">
        <property type="entry name" value="OKR_DC_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OKR_DC_1" evidence="2">
        <location>
            <begin position="10"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="domain" description="OKR_DC_1_C" evidence="3">
        <location>
            <begin position="457"/>
            <end position="495"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="527" mass="57871" checksum="ABB852C2081867BF" modified="2011-01-11" version="1">MMGKKTVHAPLVEALIRYSSQGNASFHVPGHKNGQVYRHEEMASLLQEVMSIDATEITGLDDLHHPEDVIREGQELAAKCFGAEESFWLIGGSTVGNLAMILTVCTKPGDVLLVQRNVHKSVLNGLMLSGAEAVFLDPEIDTLSGLAVAPSTDTIKAALKDYPSAKGVLLTLPNYYGMGRDLTATAKACHAADVPLMVDEAHGAHYGLHPRLPFSALSCGADVVVQSTHKMLPAMTMGAMLHVQGRRIHRELLRQRLAMVQSSSPSYPLMASLDLARWYIDAYGTDAFTEGLAAADAFRKGLAQLPRFRLVEPTQQASEKCDAQKGISEALERAEERTNGYSTQDPFKMVLYDTWGVLDGFGLKRELETYGCIPEMSDEKHVVLLFTLGSIARDVSHLLQALVHINNDIRFKGTAEEPELAGKEQQRLELDFSTWNNDGMKAYSSPVQFGLQPIDPDQMEIVPVEESAGRTAAEMIIPYPPGIPLLYAGEMITEAIALRMVRLRELGAKWQGVADESMLTIRVFRLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDV2</accession>
    <name>E3EDV2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal RNA small subunit methyltransferase A</fullName>
            <ecNumber evidence="6">2.1.1.182</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">16S rRNA dimethyladenosine transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">16S rRNA dimethylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rsmA</name>
        <name evidence="6 9" type="synonym">ksgA</name>
        <name evidence="9" type="ORF">PPSC2_00150</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>adenosine(1518)/adenosine(1519) in 16S rRNA + 4 S-adenosyl-L-methionine = 4 H(+) + N(6)-dimethyladenosine(1518)/N(6)-dimethyladenosine(1519) in 16S rRNA + 4 S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:19609"/>
            <dbReference type="Rhea" id="RHEA-COMP:10232"/>
            <dbReference type="Rhea" id="RHEA-COMP:10233"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74493"/>
            <dbReference type="EC" id="2.1.1.182"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.182" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368670.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13165"/>
    <dbReference type="EnsemblBacteria" id="ADO54018">
        <property type="protein sequence ID" value="ADO54018"/>
        <property type="gene ID" value="PPSC2_00150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.29"/>
    <dbReference type="eggNOG" id="COG0030">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041220_0_0_9"/>
    <dbReference type="OMA" id="KEEEPYF"/>
    <dbReference type="OrthoDB" id="2030110at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052908">
        <property type="term" value="F:16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00607">
        <property type="entry name" value="16SrRNA_methyltr_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001737">
        <property type="entry name" value="KsgA/Erm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023165">
        <property type="entry name" value="rRNA_Ade_diMease-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020596">
        <property type="entry name" value="rRNA_Ade_Mease_Trfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020598">
        <property type="entry name" value="rRNA_Ade_methylase_Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011530">
        <property type="entry name" value="rRNA_adenine_dimethylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11727">
        <property type="entry name" value="PTHR11727"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00398">
        <property type="entry name" value="RrnaAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00650">
        <property type="entry name" value="rADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00755">
        <property type="entry name" value="ksgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01131">
        <property type="entry name" value="RRNA_A_DIMETH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51689">
        <property type="entry name" value="SAM_RNA_A_N6_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 6 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 6" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="4 6 7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="rADc" evidence="8">
        <location>
            <begin position="38"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="33"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="58"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="32699" checksum="5DE994B511DFDF58" modified="2011-01-11" version="1">MTGIQDIATPRRTKEIIQRHGFSFKKSLGQNFLIDQNILSKIVNAAGLDDTKGALEIGPGIGALTEKLAQSAKAVTAVEIDQRLLPILEEVLAPYEHVKVRHGDVLKLDLREVFAADFADVSKVSVVANLPYYVTTPILMRLLEDKLPLENIVVMIQKEVAERMAASPGTKDYGSLSIAVQYYSEPELVCTVPNTVFIPQPNVDSAVIRLRVREVPPVEVVDEKHFFEVVHAAFAQRRKTISNNLKSRFFTKENRDTLEPLLQQADIEPSRRGETLSIEEFARLSAVLLEAGIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEC8</accession>
    <name>E3EEC8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">phyB</name>
        <name evidence="11" type="ORF">PPSC2_05225</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369684.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18140"/>
    <dbReference type="EnsemblBacteria" id="ADO55051">
        <property type="protein sequence ID" value="ADO55051"/>
        <property type="gene ID" value="PPSC2_05225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1059"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_114_18_9"/>
    <dbReference type="OMA" id="YRISPLM"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="PAS" evidence="9">
        <location>
            <begin position="7"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="10">
        <location>
            <begin position="83"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="9">
        <location>
            <begin position="136"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="10">
        <location>
            <begin position="205"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="9">
        <location>
            <begin position="251"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="10">
        <location>
            <begin position="326"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="9">
        <location>
            <begin position="380"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="648"/>
            <end position="871"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="891" mass="101636" checksum="DE5F8884AA0E8BF2" modified="2011-01-11" version="1">MFSAAQRLPLLEHMYNHAPTGIVILSREGKCLYVNPAFCKMVGYEQEELLDIRYYHLLYNEAQDQQGLREAYAGWLKATDQVYKTELRLKHKRGTTVWLSLELTIFDDEATEQSYLIAYAMDVTEKKDMEQVLSDNEDLYMLITENTPDVISYSTADGILQYISPSVEKLLGYTKQEMLGKKRLQFYHIEDADYMRVHGMFKETGIMKRRVRHKDGHYLWLEVSYRIIRDEQGKIKRVLSIGRNITERQKSEENLAKAQQLAMFGSWDWDLVNNVMHFSKEFRSIFGYRVKPVETSIDAFMKAVHPEDTERMKQIINNVILKGIHEETFYRIVLPNGEQKVLRSIWEAEMDEHAGKPVQVVGMIQDVTEHREIEQRLRESENRYKSLFQHNPLGICAMNMEGHILSVNPSLEKLTGYTRDELLGTEILVMASSEEQDKIKRHIEMAKQGETQTYESEFIHKEGERLFIKMTNIPIFVQEEIVGCYGIIENVTPLKNYIAQIEKLSNEHSLILNAVSEGIVGLNTEGHVRFMNPAAVEMFGIGSANPLNGSCIDVIRHADEIGSHFPDEQASILQAIRSGASYQAEEAVFWKKDGSSFLASYRISPLMDNGERKGAVMVFVDRTNEKEIIRAKESAERADRAKSEFLSVMSHELRTPMNGIIGMAGLLADTELDEEQRSYIDIITSSSNALMQILNEILDLSKIEAGKMSLLHESFVLEDVVGSVADLFMTQAMEKGIQLEWHVDQEMPGMLVGDHVRIRQILVNLVSNAIKFTERGHVNIFVERKAYSRRKKKCLIEFSVTDTGIGIPADRQHLLFQPFSQLHPALNRKYGGTGLGLSICKNLVKLMGGSIGVDSDEARGATFRFQLDLKLPEGQTLANISRDQPYDSKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EED5</accession>
    <name>E3EED5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Fe-S oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bchE</name>
        <name evidence="5" type="ORF">PPSC2_06765</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370017.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19730"/>
    <dbReference type="EnsemblBacteria" id="ADO55386">
        <property type="protein sequence ID" value="ADO55386"/>
        <property type="gene ID" value="PPSC2_06765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1393"/>
    <dbReference type="eggNOG" id="COG1032">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021572_1_0_9"/>
    <dbReference type="OMA" id="DRTFNIK"/>
    <dbReference type="OrthoDB" id="973846at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025288">
        <property type="entry name" value="DUF4080"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034466">
        <property type="entry name" value="Methyltransferase_Class_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13311">
        <property type="entry name" value="DUF4080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01123">
        <property type="entry name" value="methyltransferase_(Class_B)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="3">
        <location>
            <begin position="1"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Radical SAM core" evidence="4">
        <location>
            <begin position="172"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="618" mass="71529" checksum="DA562BB013D43522" modified="2011-01-11" version="1">MKVILSTLNAKYIHTSLAIRCLKAYSEKDFDIELAEYTIKDPVMNIVSDLFQRGADVIGFSCYIWNIEETIKVIDVLKKIMPEVKIVLGGPEVSYDTEHWMKRLANVDFIVVGEGEETFHQLLQELEGDRKFHFVYGLAYRKGEEVIIMPGRPKADLNELPSPYRFAEDIPELGKRVVYFETSRGCPFSCQFCLSSIEVGVRYYDIERTKSDILYLIDNGAKLIKFVDRTFNIKRDYALEMFKFLIENHRGCVFQFEITADIMRPEVLDYLAENAPPGVFRFEIGVQSTNDPTNELVKRRQNFTKLSRTVTKVKQSGKIDQHLDLIAGLPLEDYNTFRKTFNDVFALGPEELQLGFLKMLRGTGLRIDADKYNYTYMDVAPYEMLSNDVLSFADIVRLKRLEDVLEKYWNSHRMDHTVNYLIEREFSSAFDFFQEFGDYWEGQGWQKIGHQLEDLFTRLQSFLESRGTKQMDMVLGLMKLDYFLNHKYKPRKIWWEHTLEKDDWSSYMKMALQHPDALLSPAAADVSKENTGETDVASQQTQPYREMIPAFASLNLGEKELQKHAVLDVLPFSLDHILSGGSPLTAEGRTLLLVVYQQNGQQKPLYYTMPIGKNIAAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEH9</accession>
    <name>E3EEH9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Putative metal-dependent hydrolase PPSC2_06975</fullName>
            <ecNumber evidence="5">3.-.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yfiT</name>
        <name evidence="7" type="ORF">PPSC2_06975</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Possible metal-dependent hydrolase.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="5">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the metal hydrolase YfiT family.</text>
    </comment>
    <dbReference type="EC" id="3.-.-.-" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370061.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19955"/>
    <dbReference type="EnsemblBacteria" id="ADO55430">
        <property type="protein sequence ID" value="ADO55430"/>
        <property type="gene ID" value="PPSC2_06975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1437"/>
    <dbReference type="eggNOG" id="COG2318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105789_1_0_9"/>
    <dbReference type="OMA" id="GWTIRQV"/>
    <dbReference type="OrthoDB" id="1812981at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01256">
        <property type="entry name" value="YfiT_hydrol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024775">
        <property type="entry name" value="DinB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023774">
        <property type="entry name" value="Put_metal_dep_hydrolase_YfiT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12867">
        <property type="entry name" value="DinB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="DinB_2" evidence="6">
        <location>
            <begin position="36"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF12867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="20501" checksum="A7DC9D2307B88785" modified="2011-01-11" version="1">MDKDLRYPIGPFVVPDTITEEQLTTWIDDIAELPGQLRQAVEGLNEQQLNTPYREGGWTIRQVVHHLADSHMNSYIRFKLALTEDTPTIKPYDEGRWAEIPDARELPLEPSLQLLEGLHERWVTMLRSLGEDQLHRTFIHPESGQTIRLERNIGIYAWHGKHHTAHITSLKERNAW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEK9</accession>
    <name>E3EEK9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">C4-dicarboxylate ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dcuB</name>
        <name evidence="9" type="ORF">PPSC2_08140</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370319.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1722"/>
    <dbReference type="EnsemblBacteria" id="ADO55696">
        <property type="protein sequence ID" value="ADO55696"/>
        <property type="gene ID" value="PPSC2_08140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1712"/>
    <dbReference type="eggNOG" id="COG2704">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036056_1_1_9"/>
    <dbReference type="OMA" id="PKQINYL"/>
    <dbReference type="OrthoDB" id="591678at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015556">
        <property type="term" value="F:C4-dicarboxylate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004668">
        <property type="entry name" value="Anaer_Dcu_memb_transpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36106">
        <property type="entry name" value="PTHR36106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03605">
        <property type="entry name" value="DcuA_DcuB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004539">
        <property type="entry name" value="C4-dicrbxl_trns"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00770">
        <property type="entry name" value="Dcu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="90"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="163"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="224"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="265"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="294"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="336"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="416"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="438" mass="46717" checksum="4AAC38F39E60FDC1" modified="2011-01-11" version="1">MFWFELLIIFLLIFFGARVGDVFMGLLGGVGVAIFVFIFHVQPAAPPIDVMLIILAVVLAASALQSSGGLNLLVQIAEKMLSKSPKNITIIAPIISWLFTFLSGTGHVVYSLLPIINKLAIDNDIRPERPISNSIIASQQAVTCSPVSAATAAMIGFMSPLGVSLGTILAISIPATLLGVITSAVCTLRKGKELSEDSEYLHRLAEGLIEKSEKKAEKKETSKGAKAAVVLFLMGVLAIVIMGMFTQLRPSWVLNGEVTSLSMPHTIEMIMLVCATMIIIVCRPAIETILNGPIFRAGALAMVCAFGLAWMSSTFITGQSAFIQDHVATIVNSHPWMLAVIMFIVAALTTSQGVTTLIMIPIAIALDLPTYIIIGAWMAVNANFFLPVSAQCLAAISFDTAGTTKIGKYVLNHSFMIPGMINIILSVILATLLGSVLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEM4</accession>
    <name>E3EEM4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YtoI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ytoI</name>
        <name evidence="3" type="ORF">PPSC2_08210</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370334.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20815"/>
    <dbReference type="EnsemblBacteria" id="ADO55711">
        <property type="protein sequence ID" value="ADO55711"/>
        <property type="gene ID" value="PPSC2_08210"/>
    </dbReference>
    <dbReference type="GeneID" id="66573363"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1726"/>
    <dbReference type="eggNOG" id="COG4109">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054913_0_0_9"/>
    <dbReference type="OMA" id="IEQMMIY"/>
    <dbReference type="OrthoDB" id="346340at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1390.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010766">
        <property type="entry name" value="DRTGG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028979">
        <property type="entry name" value="Ser_kin/Pase_Hpr-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07085">
        <property type="entry name" value="DRTGG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75138">
        <property type="entry name" value="SSF75138"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="202"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="262"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="444" mass="49613" checksum="A2F8C726868D6EE7" modified="2011-01-11" version="1">MDGLDETVTKHEQLLRHIEQLKIGSKISVRRLAKEMSVSEGTAYRAVKEAENLGIVITKERIGTVRVEKRPRGLSEQLTFADVVNIVEGHVLGGSEGLEKPLHKYVIGAMREEAMARYIDAGSLLIVGNREDAHSLALEQGAGVLITGGFGTSREVKQLADQISLPIISSRHDTFTVASMINRAIFDRLIKKKIMLIEDIAASKPKTLTLKINSTLTEFEELSATTGYHHFAIVDEWNRLIGIVSRKDVEGLQPEHTMDKCMIRNPITVTYQTSLASAAQMMAWEGVDYLPVVDRNRKLLGSVTRREVLEALRNAQKQPQLGETFDQLIWNGFAEERNEDGSLFFRGFIIPQMATNLGTISEGVLVNVMTQAGYRAARDMSGKDYVLDNLTTYFIRPVQIEDAVVLRPLLLEMSRRTCKLEIAISRENHLVCKAVMTLQSIEHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP3</accession>
    <name>E3EEP3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">Isocitrate dehydrogenase [NADP]</fullName>
            <ecNumber evidence="1 6">1.1.1.42</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">citC</name>
        <name evidence="8" type="ORF">PPSC2_08305</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>D-threo-isocitrate + NADP(+) = 2-oxoglutarate + CO2 + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19629"/>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.42"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="1.1.1.42" evidence="1 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20910"/>
    <dbReference type="EnsemblBacteria" id="ADO55730">
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        <property type="gene ID" value="PPSC2_08305"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.1745"/>
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    </dbReference>
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    <dbReference type="OMA" id="CVRPCRY"/>
    <dbReference type="OrthoDB" id="1551125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:isocitrate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
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        <property type="entry name" value="Isocitrate_DH_NADP_dimer_prok"/>
    </dbReference>
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        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
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        <property type="entry name" value="PTHR43504"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="prok_nadp_idh"/>
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    </dbReference>
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        <property type="entry name" value="IDH_IMDH"/>
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    </dbReference>
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    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Iso_dh" evidence="7">
        <location>
            <begin position="30"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019562"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="431" mass="47452" checksum="61A97E37A2EA9E1C" modified="2011-01-11" version="1">MAKFEKFELPTEGEKITIDNGQLQVPNHPVIPFIEGDGTGRDIWKASKRVLDAAVEKAYNGTKKIAWYEVFAGEKAFNTYGEWLPNDTLEAIREYIVAIKGPLTTPIGGGIRSLNVALRQELDLYVCLRPVRYFNGVPSPVKRPELVDMVIFRENTEDIYAGIEYAEGSEDVKKVIQFLQQELDVNKIRFPETSGIGIKPVSSEGSKRLVRAAIQYAVDHGRKSVTLVHKGNIMKFTEGAFKNWGYEVAEQEFADKVFTWAQYDVIKEKEGEDAANAAQKAAEDAGKIIIKDAIADIALQQVLTRPSEFDVIATLNLNGDYLSDALAAQVGGIGIAPGANINYVTGHAIFEATHGTAPKYADKDVVNPGSVILSGVMLLEHLGWKEAADLIYKGLETSINKKIVTYDFARLMDGATQVKCSEFADTIISNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EES1</accession>
    <name>E3EES1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mdmC1</name>
        <name evidence="4" type="ORF">PPSC2_08445</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21050"/>
    <dbReference type="EnsemblBacteria" id="ADO55758">
        <property type="protein sequence ID" value="ADO55758"/>
        <property type="gene ID" value="PPSC2_08445"/>
    </dbReference>
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    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
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        <property type="entry name" value="SAM_O-MeTrfase"/>
    </dbReference>
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        <property type="entry name" value="Methyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SAM_OMT_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="223" mass="24618" checksum="8E08F3182467A337" modified="2011-01-11" version="1">MHSTNTWEQVDQYISERLIPHDAVLEKVLATNQQAGLPPHDVSPNQGKLLNILAQMQGARRVLEIGTLGGYSTIWLGRALPTDGKIVTLEAHPVHAKIARSNISLAQLDGMVELREGDALEQLTQMKDESVAPFDLIFIDADKPNNPLYLEWALRFSRSGTVIIGDNVVREGEIIQAYSTDPRVQGVRKFYDLLAEESRITATAIQTVGSKGYDGFVIGIVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEV9</accession>
    <name>E3EEV9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">M1-243</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-243</name>
        <name evidence="3" type="ORF">PPSC2_00480</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0095"/>
    <dbReference type="EnsemblBacteria" id="ADO54082">
        <property type="protein sequence ID" value="ADO54082"/>
        <property type="gene ID" value="PPSC2_00480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.93"/>
    <dbReference type="eggNOG" id="ENOG5032SP4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064246_0_0_9"/>
    <dbReference type="OMA" id="QFDINTA"/>
    <dbReference type="OrthoDB" id="1244638at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168412" evidence="2">
        <location>
            <begin position="26"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="242"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="353" mass="39498" checksum="0BA66AA0FC53FAD3" modified="2011-01-11" version="1">MSKKLSVLMLTMVLLLTVALVGCSKKDELKEAITKGTANVTKLSSYELKSQFKIKDLSISSNSLPAIQNAFITDTLKDADITLDGVYQKEPLQSEMTLGIHLKGNYSTPYTIPMVVTKDKLYVKLPDLPSYRIPKKAIGKFLEIDPKQLAEQSGSKFNPEIMDPTQVQKLVSEVVSALLSEYDQATYFFDINPKDAKLPQGVEAKQVVQFKVTNDNLKQAAGVFITKALPKAIDVISKDEYANMFQVNKEKLAEAKKKLQSNTSEVSKKFNNLTVKQFDINTALDKNDIPMYQDLNANVEWNDPTSKDNVKLFVTGYMQYSKINEKTTFKLSVPTGDQVLTIEQLQKMKTVAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEZ8</accession>
    <name>E3EEZ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ftpB</name>
        <name evidence="3" type="ORF">PPSC2_00660</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368766.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13650"/>
    <dbReference type="EnsemblBacteria" id="ADO54121">
        <property type="protein sequence ID" value="ADO54121"/>
        <property type="gene ID" value="PPSC2_00660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.130"/>
    <dbReference type="eggNOG" id="COG1840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026974_0_0_9"/>
    <dbReference type="OMA" id="EWADWAS"/>
    <dbReference type="OrthoDB" id="1567509at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026045">
        <property type="entry name" value="Ferric-bd"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002825">
        <property type="entry name" value="CfbpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168891" evidence="2">
        <location>
            <begin position="43"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="357" mass="38049" checksum="77AC66EB46FFF934" modified="2011-01-11" version="1">MMNRRVFRTGWKKGAMLALTLTFGLAVAGCGTATTSKDGAQADGTAKPAGAAASTDQRLVVYSAGPDGLAKKLVAGYEAQSGVKVELFQGTTGKILARMEAEKTNPVADVVVLASLPSVQGLKKEGLTLPYPDAKNADKLNPDWSDKEGNYFSTSASALGIAYNTKLVKTRPTSWADLAKPEYKDQVNIPDPSLSGSALDFMTGYLSAKGDGGWTLFEQYKANGVAMAGANQEALDPVITGAKGVVVAAVDYMTYKAKAKGEPIDIVYPTEGTVISPRPAAILKSTQHEQNAKAFIDYLLSDEAQKLVADASLLPGRTDIKADKRANLDEIPLLKTNWEWMGEHGSDVTEKFTQMFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF35</accession>
    <name>E3EF35_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_02965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369194.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15780"/>
    <dbReference type="EnsemblBacteria" id="ADO54555">
        <property type="protein sequence ID" value="ADO54555"/>
        <property type="gene ID" value="PPSC2_02965"/>
    </dbReference>
    <dbReference type="GeneID" id="66574376"/>
    <dbReference type="KEGG" id="ppm:PPSC2_02965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.564"/>
    <dbReference type="eggNOG" id="ENOG50305X0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2082500_0_0_9"/>
    <dbReference type="OMA" id="SEQTACR"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="72"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="11736" checksum="8E15F990258C7FD5" modified="2011-01-11" version="1">MEHSWETMKSKPGSRARMAAFALMLAVPAALTGCGDDEYYDCDELPVSEQTACRDSGSSGYYYGGSTYYSGGSSYHSSRSSSSSYRKSSSSSSSSHSGFGSSGSRSGFFSGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFF4</accession>
    <name>E3EFF4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Fosmidomycin resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fsR</name>
        <name evidence="9" type="ORF">PPSC2_05515</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369750.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1136"/>
    <dbReference type="EnsemblBacteria" id="ADO55117">
        <property type="protein sequence ID" value="ADO55117"/>
        <property type="gene ID" value="PPSC2_05515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1121"/>
    <dbReference type="eggNOG" id="COG2223">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040537_2_0_9"/>
    <dbReference type="OMA" id="YFYMASF"/>
    <dbReference type="OrthoDB" id="1217595at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022324">
        <property type="entry name" value="Bacilysin_exporter_BacE_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01988">
        <property type="entry name" value="EXPORTERBACE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="65"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="118"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="182"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="231"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="268"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="301"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="325"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="357"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="385"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="26"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="422" mass="45606" checksum="58A80C1F0D58F795" modified="2011-01-11" version="1">MTTKSATKKETGQSLPLQGPQAKGTVFAILIAISFVHLFNDSIQSVIPAIFPILKESMSLSYTQIGWISFAINFTASIMQPVIGLFSDKRPTPAILPIGMGFTLTGMLLLAYAADYKAVLIAVIFVGLGSAAFHPEGSRVSHMAAGSRRGLAQSIFQVGGNAGQSLAPMLTSWIFIPLGQFGAIWFTGIAAAGIVVQSFIARWYGNVLRTEGIARKKTATRRMKPEVRSRIMFAMIVLILLVFVRSWYSTSIGSYYSFYLMEVFKMPLADAQLYIFLFLGAGALGTFFGGPLADRFGKRNMIFLSMVLAAPLALLLPYANQFWTAILLAIIGFIMLSSFSVTVVYAQMLVPGKIGTVSGLITGLAFGLGGVGALVLGNWIDKVGITNIMFLCGFLPLLGILTFLLPTDKTLNRWAEENGVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFI1</accession>
    <name>E3EFI1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yshE3</name>
        <name evidence="8" type="ORF">PPSC2_07155</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0719 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55472.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599569.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20135"/>
    <dbReference type="EnsemblBacteria" id="ADO55472">
        <property type="protein sequence ID" value="ADO55472"/>
        <property type="gene ID" value="PPSC2_07155"/>
    </dbReference>
    <dbReference type="GeneID" id="66573505"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1478"/>
    <dbReference type="eggNOG" id="COG3766">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_122820_1_1_9"/>
    <dbReference type="OrthoDB" id="1807657at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007140">
        <property type="entry name" value="DUF350"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03994">
        <property type="entry name" value="DUF350"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="47"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="81"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55472.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15340" checksum="3BAD39DEA25C52F2" modified="2015-05-27" version="2">MAIDELLSHPLGMMLGYFSVAVLELIVFLSCFELVTRYKCWEEIKRGNVSVAMATGGKMFGICNVLRFAMEAKSSVYDTMIWSFVGFLLLLAAYFLFEFLTPVFSIDQEIKEDNRAVGLFSMIISISLSYVIGASVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFP6</accession>
    <name>E3EFP6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370164.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20435"/>
    <dbReference type="EnsemblBacteria" id="ADO55537">
        <property type="protein sequence ID" value="ADO55537"/>
        <property type="gene ID" value="PPSC2_07460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1542"/>
    <dbReference type="eggNOG" id="COG4200">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086622_5_1_9"/>
    <dbReference type="OMA" id="MEYSENT"/>
    <dbReference type="OrthoDB" id="1179482at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="209"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="26439" checksum="2498E12B71DD0416" modified="2011-01-11" version="1">MILQVIKAEGYKLKKICWWLPLIQGCVLTGMTAVEWYLYFRQGPGGVYAGFAVMFMFISFVMLLGCTLLASIMAGTEHDTQTWKQLMAMPVPRSYIYVSKIVWIVILQLGTALITIAGMSLIWVLYTNEPIPWRVMLLQPINASLATLPVLAIQLWLSTLFTNQAFPLAFGIFGSIASLFLARTSILWIKLLPWSYPALSSPLIKEYVMWVVIALCAGIIFTGLGTLQFTKHEFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFW8</accession>
    <name>E3EFW8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Glutamate racemase</fullName>
            <ecNumber evidence="2 7">5.1.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">murI</name>
        <name evidence="8" type="synonym">murI1</name>
        <name evidence="8" type="ORF">PPSC2_08815</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Provides the (R)-glutamate required for cell wall biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>L-glutamate = D-glutamate</text>
            <dbReference type="Rhea" id="RHEA:12813"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:29986"/>
            <dbReference type="EC" id="5.1.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the aspartate/glutamate racemases family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.3" evidence="2 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370458.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21275"/>
    <dbReference type="EnsemblBacteria" id="ADO55840">
        <property type="protein sequence ID" value="ADO55840"/>
        <property type="gene ID" value="PPSC2_08815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1858"/>
    <dbReference type="eggNOG" id="COG0796">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052344_0_1_9"/>
    <dbReference type="OMA" id="MPWGPRT"/>
    <dbReference type="OrthoDB" id="1718671at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008881">
        <property type="term" value="F:glutamate racemase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00258">
        <property type="entry name" value="Glu_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001920">
        <property type="entry name" value="Asp/Glu_race"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018187">
        <property type="entry name" value="Asp/Glu_racemase_AS_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033134">
        <property type="entry name" value="Asp/Glu_racemase_AS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004391">
        <property type="entry name" value="Glu_race"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21198:SF2">
        <property type="entry name" value="PTHR21198:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53681">
        <property type="entry name" value="SSF53681"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00067">
        <property type="entry name" value="glut_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00923">
        <property type="entry name" value="ASP_GLU_RACEMASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00924">
        <property type="entry name" value="ASP_GLU_RACEMASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="9"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="41"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="73"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="184"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="269" mass="29356" checksum="B2F7AFEF0052F6E0" modified="2011-01-11" version="1">MQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKKFTEQMVDFLIQFNPKVIIIACNTATAAALEYISQKVSIPVIGVIHPGARAAISATATGYVGVIGTVGTIRSGAYTTALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTSQVVEESLRPIQTYPIDCLILGCTHYPFLRETIQEVMGPAVKLISSADETARETSTILYNKGKLEAGDETPVHQLFCSGDPELFQRIAAQWLGEQIRQTPVVWQVTHLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG75</accession>
    <name>E3EG75_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rr09</name>
        <name evidence="5" type="ORF">PPSC2_10790</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370874.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23185"/>
    <dbReference type="EnsemblBacteria" id="ADO56268">
        <property type="protein sequence ID" value="ADO56268"/>
        <property type="gene ID" value="PPSC2_10790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2285"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_1_9"/>
    <dbReference type="OMA" id="DPSYFNR"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="4"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="163"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="30479" checksum="62F78744BE43C59F" modified="2011-01-11" version="1">MTTKLLIADDEKNIRMGLQAMIEREYSGLYECVLVKDGKEAWQHVMEFSPELVITDIRMPVMDGIMLMQHIRKLEPRDRPLVIILSGYDEFQYAREAIRCGAREYLLKPIVREELFGALAVLNEELQQRNSLLNDRVDSGEIDRQPSRTDVASAIADRSGSMTRAIQYIHAHFSEDLNMAVVSNSVSLNYTYFSQAFKAYTGLSFVQYLKRLRIAEAKKLLGRQEGKIYEIAATVGFDNAKHFNKVFRELEGMSPQQFRLKNLGGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGM8</accession>
    <name>E3EGM8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-820</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-820</name>
        <name evidence="2" type="ORF">PPSC2_03465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54667.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599455.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54667">
        <property type="protein sequence ID" value="ADO54667"/>
        <property type="gene ID" value="PPSC2_03465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.676"/>
    <dbReference type="eggNOG" id="COG2931">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033898_0_0_9"/>
    <dbReference type="OrthoDB" id="1489417at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021210">
        <property type="entry name" value="Exosporium_BclB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03721">
        <property type="entry name" value="exospore_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="145"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="153"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54667.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="578" mass="53244" checksum="4E47CF524A1D5659" modified="2015-05-27" version="2">MKHKRPFRFSGASKKDEDCKPPRDNRSIEALLKLIHELTSIVPLVFANPSAANVSLLQQILRQLLSLAKSLRLRSGAKADLLAALELAIVALEATPFSPISVGTTLQQLLDALLSIVLQESLNSTLKDSLIRAIRTAGTTVSNALSEPYLSGEPGPQGPPGPVGPGGAPGPAGVPGPPGPPGPVGPGGAPGPAGVPGPPGPPGPVGAAGPIGAEGPAGPVGAAGPIGAVGPAGPAGPAGGVTGATGATGADGLVGPAGATGPTGADGLPGAVGAVGPAGATGPTGADGLPGAVGAAGPAGATGPTGADGLPGAVGAAGPAGATGPTGADGLPGAVGAVGPAGATGPTGADGLPGAVGAAGPAGATGPTGADGLPGAVGAVGPAGATGATGVGGATGATGVTGATGSGAIIPFASGGPAILTTVLGGLVGTTSLIGFGSSATGIGLVNGVIDLTGTLVGPLINFAFSVPRGGVITSITGYFSTTAALTLLGSSVSITAQLFSSPTPNNTFIAVPGATVTLTPPLTDIVALGTTSSGIATGLAIPVTAQTRLLMVFSATATGVSLVNTVVGYASAGVTIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGZ4</accession>
    <name>E3EGZ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ydhD3</name>
        <name evidence="4" type="ORF">PPSC2_07545</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370181.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20515"/>
    <dbReference type="CAZy" id="GH18">
        <property type="family name" value="Glycoside Hydrolase Family 18"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55554">
        <property type="protein sequence ID" value="ADO55554"/>
        <property type="gene ID" value="PPSC2_07545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1559"/>
    <dbReference type="eggNOG" id="COG3858">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_520583_0_0_9"/>
    <dbReference type="OMA" id="WAMVGNR"/>
    <dbReference type="OrthoDB" id="1081028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008061">
        <property type="term" value="F:chitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011583">
        <property type="entry name" value="Chitinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029070">
        <property type="entry name" value="Chitinase_insertion_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001223">
        <property type="entry name" value="Glyco_hydro18_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00704">
        <property type="entry name" value="Glyco_hydro_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00636">
        <property type="entry name" value="Glyco_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51910">
        <property type="entry name" value="GH18_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168206" evidence="1">
        <location>
            <begin position="32"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="36"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="97"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="161"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="GH18" evidence="3">
        <location>
            <begin position="219"/>
            <end position="537"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="541" mass="60264" checksum="C8DBF7F0CB6D8FDB" modified="2011-01-11" version="1">MSSKRSRWLTRFTLSATTAITIFTTFTSYLAAPAAASGVAFRDIAHSYAYQSIISLHAKGILNGTQPGYFSPKKAVTRAEWVTALDRTLGLEPVQAVVSSYRDVPKQAWYYGWIEAASQLDIVQGGSSATFQPNSPITRQEAALMIARLIRSSGGSGGTTSSFTDRDEIADWALEGVTTVNRYGFMKGENNYFRPASSLTREETAVLLERLLTYSAQHARQAASTTSSIRLGWQYDQTVQQFENTVLQSNINTLSPRWFFLNETGSISDYTNSSLLTWSKQHQKKIWAMVGNRSNLALTHQILSSEVLRATTITQLANAVSVHGLDGLVIDFENVDGQDRAYLTLFVQQLKAKLKSQNAVLALCVSPDYGTDWTAAFDYRKLGAAADYLILMGYDEHWGGSSIPGSVSSLPWLRESVRRFVQTTDPEKAILALPLFTRNWTLNTSGQSIASSDISLDQQNQLISRISSKPIWNEDIQQYTVSYKDTQLHKLWLEEGRSFTRKYRLGQDEGFAGFAYWYSGGASSDLWSSVKNADRFIQRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGZ9</accession>
    <name>E3EGZ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370186.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20535"/>
    <dbReference type="EnsemblBacteria" id="ADO55559">
        <property type="protein sequence ID" value="ADO55559"/>
        <property type="gene ID" value="PPSC2_07565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1563"/>
    <dbReference type="eggNOG" id="ENOG50332AG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1584875_0_0_9"/>
    <dbReference type="OMA" id="YHVDEKQ"/>
    <dbReference type="OrthoDB" id="1811595at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="20671" checksum="43C3A609FE5FD4F8" modified="2011-01-11" version="1">MKKESNQDETSYLFNVDVLVKGRSNVEALQFLLNLLSQNEQIADSRIQSGIELGNLIEAALYLKKQSAVNSPSDAAATLAERFSKKKAAAIPNKTPVVQEIKQSHVQPKPAIQQDLSTYEWIKRYIHDNTLVRLIVNRYGGQRSIPCRILNLDHDNNLLSVYHVDEKQVYSFKMNEIDEITS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH2</accession>
    <name>E3EHH2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 12">Aspartate-semialdehyde dehydrogenase</fullName>
            <shortName evidence="12">ASA dehydrogenase</shortName>
            <shortName evidence="12">ASADH</shortName>
            <ecNumber evidence="7 12">1.2.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Aspartate-beta-semialdehyde dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 14" type="primary">asd</name>
        <name evidence="14" type="ORF">PPSC2_10160</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>L-aspartate 4-semialdehyde + NADP(+) + phosphate = 4-phospho-L-aspartate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:24284"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57535"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="1.2.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 12">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 2/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 2/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 12">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6 12">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 12">Belongs to the aspartate-semialdehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.11" evidence="7 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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        <property type="protein sequence ID" value="ADO56125"/>
        <property type="gene ID" value="PPSC2_10160"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.2141"/>
    <dbReference type="eggNOG" id="COG0136">
        <property type="taxonomic scope" value="Bacteria"/>
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    <dbReference type="HOGENOM" id="CLU_049966_0_1_9"/>
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        <property type="reaction ID" value="UER00016"/>
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        <property type="reaction ID" value="UER00463"/>
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        <property type="reaction ID" value="UER00464"/>
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        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="term" value="F:protein dimerization activity"/>
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        <property type="term" value="P:'de novo' L-methionine biosynthetic process"/>
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        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
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        <property type="entry name" value="Asp_semialdehyde_DH"/>
    </dbReference>
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        <property type="entry name" value="Asp_semialdehyde_DH_beta"/>
    </dbReference>
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        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="Semialdehyde_DH_NAD-bd"/>
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        <property type="entry name" value="Semialdhyde_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01118">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02774">
        <property type="entry name" value="Semialdhyde_dhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00859">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01296">
        <property type="entry name" value="asd_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 12" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="10 12" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="11 12" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="12" id="KW-0521">NADP</keyword>
    <keyword evidence="12 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-0791">Threonine biosynthesis</keyword>
    <feature type="domain" description="Semialdhyde_dh" evidence="13">
        <location>
            <begin position="7"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="12">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="12">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="14"/>
            <end position="17"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="42"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="158"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="161"/>
            <end position="162"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
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        <location>
            <position position="324"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005097"/>
        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00010584"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
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    </evidence>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022697"/>
        </source>
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        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO56125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="345" mass="37143" checksum="FD0476D56E570863" modified="2011-01-11" version="1">MSNRKFNVAVVGATGAVGEQIVNLLEKRDFPVEKIKFLSSPRSAGTLISFKGQQIPVEIATPDSFEGIDIALFSAGGDVSKELAPHAVRHGAVCIDNTNAFRMEPTAPLVVPEVNSDKIAEHQGIIANPNCSTIQMVAALKPLYDQYGISRIIVSTYQAVSGAGSRAIDELNRQSAAILNGDEVQPDLLPVGSLPVKHQIAFNAIPQIDKFQDNGYTLEEMKMVRETKKILGDDSVDVTATCVRIPVVYGHSESVYVELKKDYDLEEVRNLLASAPGVTLVDDPAAQLYPLASEAAGKPDVFVGRVRRDLGNSRGLNLWVVSDNLLKGAAWNAVQIAEIIAAKAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHM3</accession>
    <name>E3EHM3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Heme transporter CcmC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mprA3</name>
        <name evidence="8" type="ORF">PPSC2_10870</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2313"/>
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        <property type="protein sequence ID" value="ADO56285"/>
        <property type="gene ID" value="PPSC2_10870"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.2302"/>
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    </dbReference>
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        <property type="component" value="Chromosome"/>
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        <property type="term" value="F:DNA binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
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    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="3"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="124"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="124"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="25775" checksum="4342485EE70938C9" modified="2011-01-11" version="1">MTRVLVVDDDPHIRELVGHFLRLEGLEVVEAVDGLDAMRLFDETKVDLLVLDIMMPGMDGWELCRKLREQTDLPLLMLTAKGETSQIVKGFALGTDDYLVKPFDPMVLVARVKALLKRYRIMASKSVTIGDLVLRSDTFECQAGEQGITLPRKEFELLFKLASYPGKTFTRDHLIEQIWGYDYEGDERTVDVHIKRLRERFPEATQSFAIRTIRGLGYRLEIRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIH2</accession>
    <name>E3EIH2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369916.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19220"/>
    <dbReference type="EnsemblBacteria" id="ADO55285">
        <property type="protein sequence ID" value="ADO55285"/>
        <property type="gene ID" value="PPSC2_06275"/>
    </dbReference>
    <dbReference type="GeneID" id="66573685"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1294"/>
    <dbReference type="eggNOG" id="ENOG50339NT">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_129692_0_0_9"/>
    <dbReference type="OMA" id="QWNNRIV"/>
    <dbReference type="OrthoDB" id="1487974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="167" mass="19915" checksum="1EB629D3B0A82C9C" modified="2011-01-11" version="1">MFVIRGTEKLLKEWETEPLQVDIYPPLNSWHARLFLLNRRKNIVFMHDISRLSVTLFGIKKSQYKNLPALFVQTLKELMISEGFDEQIVKAYIQEGEQMLATTTNRHSVMVTLDEIIFIMKELDMEHGCELEKNQWNNRIVFKTDQYKYPIDVFKELLEKHYKVESS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EII3</accession>
    <name>E3EII3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370248.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1645"/>
    <dbReference type="EnsemblBacteria" id="ADO55621">
        <property type="protein sequence ID" value="ADO55621"/>
        <property type="gene ID" value="PPSC2_07815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1626"/>
    <dbReference type="eggNOG" id="ENOG50307G1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2260983_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="12141" checksum="028B27940A5E98B1" modified="2011-01-11" version="1">MKEGLTLEFHKNKLIFFEFKKKAVTLIPDIIREEFKDAQVINEHNSKEKVIYQVYLYENDIEFTIRIIASYFYDSIIIIADEVNITIRAYQVLHKILANGSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIZ8</accession>
    <name>E3EIZ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370786.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EIZ8"/>
    <dbReference type="STRING" id="1406.LK13_22870"/>
    <dbReference type="EnsemblBacteria" id="ADO56179">
        <property type="protein sequence ID" value="ADO56179"/>
        <property type="gene ID" value="PPSC2_10405"/>
    </dbReference>
    <dbReference type="GeneID" id="66577834"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2193"/>
    <dbReference type="eggNOG" id="COG3266">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1568514_0_0_9"/>
    <dbReference type="OMA" id="SEQIHAY"/>
    <dbReference type="OrthoDB" id="1311820at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036689">
        <property type="entry name" value="ESAT-6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010310">
        <property type="entry name" value="T7SS_ESAT-6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06013">
        <property type="entry name" value="WXG100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140453">
        <property type="entry name" value="SSF140453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="157"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="19678" checksum="CE00C9837392FDD7" modified="2011-01-11" version="1">MRIRVEPDVLRGLSGQLQHAAEQIQQLTAGLEQALQSLDWDVSAREAILNQWMQAKRMSEQIHAYLHTSGTQLNRKAEQFQSVDHNYQTILPFASQPLGRPVTMLDWSNQQSPSILPGQASEGSSLISNPQSVVHAIAGVQPSDVGTLHQDILKQASSSSPQDWYFTDPSIARDQPVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ37</accession>
    <name>E3EJ37_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATP-dependent helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hrpB</name>
        <name evidence="3" type="ORF">PPSC2_10570</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370824.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22965"/>
    <dbReference type="EnsemblBacteria" id="ADO56218">
        <property type="protein sequence ID" value="ADO56218"/>
        <property type="gene ID" value="PPSC2_10570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2234"/>
    <dbReference type="eggNOG" id="COG1643">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001832_5_6_9"/>
    <dbReference type="OMA" id="DLRILVM"/>
    <dbReference type="OrthoDB" id="604268at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007502">
        <property type="entry name" value="Helicase-assoc_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010225">
        <property type="entry name" value="HrpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013689">
        <property type="entry name" value="RNA_helicase_ATP-dep_HrpB_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04408">
        <property type="entry name" value="HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08482">
        <property type="entry name" value="HrpB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005496">
        <property type="entry name" value="ATP_hel_hrpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00847">
        <property type="entry name" value="HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01970">
        <property type="entry name" value="DEAH_box_HrpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="16"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="198"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="842" mass="91932" checksum="BBBEA50A21649E2F" modified="2011-01-11" version="1">MTDKQLPIMQVIPELKHALLSHSAAVLIAQPGAGKTTVTPLELLHEPWLAGQKIIMLEPRRLAARAAAAQMAKALGESTGKTVGYRVRMDTKIGPSTRIEVVTEGVLTRMLQHDQALEGVGLIIFDEYHERSLHADLGLALALQSQALLRPDLKILIMSATLEAEPVCRLLGDAPLLECPGTVFSVETLHMPKPSSTSLESFAAEIVEKALHAHEGDLLVFLPGTREIHRTERELTSRNLPAYVKIIPLYGSMKLEQQDEALRPSVPGSRKVVLATSIAESSLTIAGITVVIDSGLSRESVFSPRTGMSRLTTVTVSKASADQRRGRAGRLQPGVCYRLWSAQEHTALPDASRPEITVADLAPLALELATWGVHEPAELAWLDAPPEAAYRQATGLLRQLGCLEAAADGTAGGITAHGREVSALGTHPRLGHMLLRAAALGLAPTASRLAALLQERDPFRAHGGTDLRPRLDALREAAHARSTHSLLGAADDTVIRRIVQESRQLLATLPDAAATQDEPDGSAACGLLLAFAYPDRIAQGRGDGRFLLSSGRGARLRQVEWMSRSPYLVAAEVDDEGADGAIQLAAPIELQELIQHCSDLLLEQANVYWDSSASAVRARKVIRLGSLILKETSYERPPAEEIAAALMQGVRERGLKLLSWNRPTLQLQARLIFMHFSAPEEWPDSSESALLDSLESWLLPFALGAKNLADLQRLDSSELLLGRLNWEQRQQLEQEAPTHIRVPSGSRIPVDYSQPEAPSLAVRLQELFGMKDTPRIGRGRVPIVLHLLSPAQRPVQVTSDLSSFWSETYFEVKKDLKGRYPKHYWPDDPLEAVATNRAKPKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJF8</accession>
    <name>E3EJF8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Peptidase M29</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ampS1</name>
        <name evidence="10" type="ORF">PPSC2_11915</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peptidase M29 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371113.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24235"/>
    <dbReference type="MEROPS" id="M29.002"/>
    <dbReference type="EnsemblBacteria" id="ADO56508">
        <property type="protein sequence ID" value="ADO56508"/>
        <property type="gene ID" value="PPSC2_11915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2524"/>
    <dbReference type="eggNOG" id="COG2309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054346_1_0_9"/>
    <dbReference type="OMA" id="HIALGRC"/>
    <dbReference type="OrthoDB" id="689314at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1830.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035097">
        <property type="entry name" value="M29_N-terminal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000787">
        <property type="entry name" value="Peptidase_M29"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02073">
        <property type="entry name" value="Peptidase_M29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00919">
        <property type="entry name" value="THERMOPTASE"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="45977" checksum="8712E74C5545783A" modified="2011-01-11" version="1">MNPFESLLEQYAELVVRVGVNIQPGQAMLVTAPLETVEFTRLIVSKAYEAGAKYVQVEFEDDSITRSRFEHGDEASFDYYPAWKAEMMEKFAEEGGATLTIKVPNPDLYQGIDPQKVSRATKAAATAREGFSKYTRNHKISWCLIKAPTKAWADKVFADVAEEDRIRVMWDTIFQMNRVDGSDPIQNWQNHLKNLEQVQDKLNHKKYKSLHYRAPGTDLRIELADGHIWRSGGGENGRGDYFVANMPTEEVFTMPKRTGVDGHITSTMPLNLNGQLVDRITFTFKDGKVTEYTAESGEQHLTHLLATDEGASYLGEVALVPHDSPISNLNRIFYNTGIDENASCHLALGSAYPFNIENGTQMNREELLQNGANVSLTHVDFMIGSAELDIDGELQDGSKEAVFRKGNWAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJH1</accession>
    <name>E3EJH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methionine gamma-lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mgl</name>
        <name evidence="4" type="ORF">PPSC2_11975</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the trans-sulfuration enzymes family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371125.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24295"/>
    <dbReference type="EnsemblBacteria" id="ADO56521">
        <property type="protein sequence ID" value="ADO56521"/>
        <property type="gene ID" value="PPSC2_11975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2536"/>
    <dbReference type="eggNOG" id="COG0626">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018986_2_0_9"/>
    <dbReference type="OMA" id="GPYTYGR"/>
    <dbReference type="OrthoDB" id="637281at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11808">
        <property type="entry name" value="PTHR11808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="385" mass="42633" checksum="2B45BABA46D75408" modified="2011-01-11" version="1">MSFSDELICFGFEDRLGYFAKAAVPPIYETAPFFFDTYEDYAEAANHEKEHYVYSRGTNPTVRIAEQMIAALEGGEDCKCFASGMAAISAALMCSLSAGDHLILVGHIYETSVSLAKYLTKFDINYTIVHSTSTKAVANAIQPQTRAILMESPTSFTFDMVNIQEVASLSKAKGIRTIIDNSWATPLFQKPLEWGVDIVVHSASKYLGGHNDLIAGAVIASKEIINRMYAEEYELIGGSLAPFEAWLLIRGLRTLPLRMEAHQRNALLVARFLSDHPAISKVNHPGLPSHPQHELACRQLKGYAGLFSFELKDSGYEDICRVINKLRLIRIGVSWGSMESQVISPNYGFNKQSLKKQHMPKSLIRLAVGHEPAELLIEDLATALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJI3</accession>
    <name>E3EJI3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvaA</name>
        <name evidence="3" type="ORF">PPSC2_12050</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371137.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24380"/>
    <dbReference type="EnsemblBacteria" id="ADO56533">
        <property type="protein sequence ID" value="ADO56533"/>
        <property type="gene ID" value="PPSC2_12050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2549"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_19_1_9"/>
    <dbReference type="OMA" id="AAPWSWE"/>
    <dbReference type="OrthoDB" id="1840839at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="9"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="156"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="354" mass="39174" checksum="22A16DA8B7E7160A" modified="2011-01-11" version="1">MKMDNRKYNVVIIGYGGMGSYHVQLIEPIEQLAIGGVYDIVDYRMELAAAAGYKTYASLEAVLGDQDVDIVLIATPNDVHKEIAIQALQAGKHVICEKPVTITSADFLDIVEVAKQENRLFTVHQNRRWDEDFRIVKDIISKKTVGDLFHLESRVQGANGIPGDWRQLKAYGGGMLLDWGVHLLDQLLQITDSQIESVTATLSYILGTEVDDGFTSLIEFKDGLTAVIEVGTTNYVKLPRWYIKGTEGTAVIKDWDLSGEIVTRNPDVAHVEPKPIQAGQGLTKTMAPPSEESTLKFPIEKIPAAAESFYENFVSTIEGKAELAIKSEEVHRVLVLIETIFEAAATKSVIRRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJJ2</accession>
    <name>E3EJJ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Tetracycline resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">tetL</name>
        <name evidence="9" type="ORF">PPSC2_12095</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371146.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24425"/>
    <dbReference type="EnsemblBacteria" id="ADO56542">
        <property type="protein sequence ID" value="ADO56542"/>
        <property type="gene ID" value="PPSC2_12095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2558"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_3_0_9"/>
    <dbReference type="OMA" id="GLMVIMF"/>
    <dbReference type="OrthoDB" id="1108236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="137"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="195"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="220"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="290"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="321"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="347"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="384"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="425"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="12"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="457" mass="49402" checksum="9DCE97BBBBFCCC9B" modified="2011-01-11" version="1">MEKSIEKRIPKSLIWLCVLAFFSVLNETVFNVSLPDIAAQFGIKPSAANYVNTSFILSFAVGTAVYGKISDIYGVKKLVLISMMIYSGGSLFGLLFHAWFPILLVARFIQGAGASAVPGLIMVIVTKSIEKQHQGKAFGMIGSTVALGEGFGPIVGGWIADYVHWSYLFFLPMMTLVTLPFFLRTLPDEPMKKGGLDVLGGLLFVLGIVSFTLFTTHYEWWYLTNSVILFIGFVLRIRRAKEPFVEPALFKMRRFIVGVFVGGILLGTVAGFMSMIPYMMREVHQMPTSLIGGGVLFPGTLSVILFGIVGGSLVDRQGARFVMVAGLLLLVMGLFIVSLFADRSLWIISGALVLIFGGLSFVKTVISTIVAGSLSADESGSGMGFLNFSCFLAEGIGIAIVGGLLTQLRCNFPILPIVTDVAAYLYSNLTLLLLAVVITGGAIFMIVFKGEKASLDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJJ6</accession>
    <name>E3EJJ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">L-glyceraldehyde 3-phosphate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the shaker potassium channel beta subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371150.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56546">
        <property type="protein sequence ID" value="ADO56546"/>
        <property type="gene ID" value="PPSC2_12110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2561"/>
    <dbReference type="eggNOG" id="COG0667">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_0_9"/>
    <dbReference type="OrthoDB" id="1351747at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005399">
        <property type="entry name" value="K_chnl_volt-dep_bsu_KCNAB-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43150">
        <property type="entry name" value="PTHR43150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01577">
        <property type="entry name" value="KCNABCHANNEL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="2">
        <location>
            <begin position="28"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="37176" checksum="9CDE24A98BB33A70" modified="2011-01-11" version="1">MTYIAQENRYEQMKYRRIGRSGVRLPAISLGLWQNFGGDKPFEDSRAMILRAFDLGVSHFDLANNYGPPPGSAEETFGHVLKKDLAPYRDELFISTKAGYYMWPGPYGEWGSRKNLLASLDRSLQRMGLDYVDVFYHHRPDGDTPLEESMGALAHAVKTGKALYVGLSNYGPEETKQAAAILKNLGTPLLVHQPMYSMLNRWIENGLQDVLTEVGAGTVAFCPLGRGQLTGKYIDKLEAEFKTGLRTLKLEAISQERINKFRALEAIAKRRGQTLPQIALTWALREGGVDSVLIGASRVGQIEENVQAVHADPLSAADLQEIDQVMHNIGDVPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJR4</accession>
    <name>E3EJR4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59662.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886190.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59662">
        <property type="protein sequence ID" value="ADO59662"/>
        <property type="gene ID" value="PPSC2_26810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5667"/>
    <dbReference type="HOGENOM" id="CLU_168850_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035287">
        <property type="entry name" value="DUF5362"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17319">
        <property type="entry name" value="DUF5362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59662.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="12825" checksum="22D3294C47DE5167" modified="2015-05-27" version="2">MNQFNVTKHIRSLVFWCRFLGFVTIASGIISIFAGLVPFILPALLGVIPIVLGVFLLKAAKMASEFLQNSSEQSMESMLEYLAKYFKIQGIYTIVALSVCVFMFIVFGVFSILAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK15</accession>
    <name>E3EK15_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">AAA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PPSC2_26550</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="10 11">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
            <plasmid evidence="10 11">pSC2</plasmid>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the peptidase M41 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59724.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0333"/>
    <dbReference type="EnsemblBacteria" id="ADO59724">
        <property type="protein sequence ID" value="ADO59724"/>
        <property type="gene ID" value="PPSC2_26550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5600"/>
    <dbReference type="eggNOG" id="COG0465">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000688_16_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005936">
        <property type="entry name" value="FtsH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="SSF140990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01241">
        <property type="entry name" value="FtsH_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="9">
        <location>
            <begin position="193"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="137"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="137"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO59724.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="595" mass="65916" checksum="1F725780C331D2F9" modified="2015-05-27" version="2">MIKHRKKLIVLGILCAILIPLIMFLSNTPEPKKIQYTGFTKMLNEGKIKSVNIDFSLPSFNFKDKKNQLYSTDNPRRESFKDELLKKGVEVNESKKEGGLLQNILLALVNTLIWVAVFIGLMTYLQKSMNGNSHIKEFDSAENENRGGKHSPKGSKRTTFKQIAGHEEAKEDMQYLVDFLKNPLNYTIMGAKLPKGVIFYGPPGTGKTLFAKALAGEAGVPFFSVSGSDFVEKYVGTGASRVRDMFNLARKKAPCIIFIDEIDAIGRSRDSGSHSEQLQTLNAILKEMDGFDSNEGIIVIGATNRLDDLDSAFIRPGRFDKHIAIHLPDQKSRLDILKIHAQNKPLATDVDLESLSKLTVGLSGASLESILNESSILATSRRQKEITAKEIDDAYFKIVMQGHKKKGGDKRHKDEIRLVSWHEAGHALASKLLTDNDVPKVTIIPSTSGAGGVAFIIPKKMGLNSKRDLINDIKISYAGRAAEYLLLGNHMEITTGASSDIKNATKKIKMMITEVGMSDAFGMLNLDEFKPDYQSILDEASTLAKQLYDETVELLTKHLVTLKAIAEALEQKESLNEDELNTIIEKTQNEVVEAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK22</accession>
    <name>E3EK22_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386145.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0340"/>
    <dbReference type="EnsemblBacteria" id="ADO59731">
        <property type="protein sequence ID" value="ADO59731"/>
        <property type="gene ID" value="PPSC2_26520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5593"/>
    <dbReference type="HOGENOM" id="CLU_2555126_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="82" mass="9617" checksum="931E52E5A72E43CD" modified="2011-01-11" version="1">MGIHGWEHYELGKEMAEANVAKLLEMYKREDQKYINKCCEHLDMSSLLSEEGKKKVKEQCQHHEEAKIKIALEIADRLTKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK34</accession>
    <name>E3EK34_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Macro domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386157.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0352"/>
    <dbReference type="EnsemblBacteria" id="ADO59743">
        <property type="protein sequence ID" value="ADO59743"/>
        <property type="gene ID" value="PPSC2_26465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5579"/>
    <dbReference type="eggNOG" id="COG2110">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046550_7_2_9"/>
    <dbReference type="OMA" id="GHRSGEC"/>
    <dbReference type="OrthoDB" id="1812319at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002589">
        <property type="entry name" value="Macro_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01661">
        <property type="entry name" value="Macro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00506">
        <property type="entry name" value="A1pp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52949">
        <property type="entry name" value="SSF52949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51154">
        <property type="entry name" value="MACRO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Macro" evidence="1">
        <location>
            <begin position="1"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="18442" checksum="7CF29641E8118DDD" modified="2011-01-11" version="1">MDIIYRDITKANVDVIVNAANGIGYMGGMLGRFIKLPGVAESIHYATKGDVEKEAKEKSRKHKSIPSFFYGHRSGECYVTSAESLSCKWIIHAVTMPYPGMRTSIRKVRLLIPEIIKTAQLLKARSIAIPLLGTGTGGLKEEEVLALFDEEFSRVQGIDIIIFRKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK97</accession>
    <name>E3EK97_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">UDP-N-acetylmuramate--L-alanine ligase</fullName>
            <ecNumber evidence="4 12">6.3.2.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">UDP-N-acetylmuramoyl-L-alanine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">murC</name>
        <name evidence="16" type="ORF">PPSC2_27940</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="16 17">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
            <plasmid evidence="16 17">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Cell wall formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>ATP + L-alanine + UDP-N-acetyl-alpha-D-muramate = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanine</text>
            <dbReference type="Rhea" id="RHEA:23372"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:70757"/>
            <dbReference type="ChEBI" id="CHEBI:83898"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 12">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the MurCDEF family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.8" evidence="4 12"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0030"/>
    <dbReference type="EnsemblBacteria" id="ADO59424">
        <property type="protein sequence ID" value="ADO59424"/>
        <property type="gene ID" value="PPSC2_27940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5920"/>
    <dbReference type="eggNOG" id="COG0773">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028104_2_2_9"/>
    <dbReference type="OMA" id="HLEHYNN"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008763">
        <property type="term" value="F:UDP-N-acetylmuramate-L-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00046">
        <property type="entry name" value="MurC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000713">
        <property type="entry name" value="Mur_ligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005758">
        <property type="entry name" value="UDP-N-AcMur_Ala_ligase_MurC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01225">
        <property type="entry name" value="Mur_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01082">
        <property type="entry name" value="murC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 12" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6 12" id="KW-0132">Cell division</keyword>
    <keyword evidence="8 12" id="KW-0133">Cell shape</keyword>
    <keyword evidence="11 12" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 12" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12 16" id="KW-0436">Ligase</keyword>
    <keyword evidence="12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 12" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="16" id="KW-0614">Plasmid</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase" evidence="13">
        <location>
            <begin position="6"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_M" evidence="15">
        <location>
            <begin position="109"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="14">
        <location>
            <begin position="310"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="111"/>
            <end position="117"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO59424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="459" mass="50076" checksum="594ADBD448C1A829" modified="2011-01-11" version="1">MIISEHVHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQSLTEKLAAKGAKIYIGHTPEHIAGADIVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERKGIAVAGAHGKTTTSSMIALVMERCNVDPTYIIGGEITNLGTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVTNIEADHLENYDGDFNRLKSAYVQFLGQIQPDGAAIVCADDQNIQEMLPQLQTRVITYGIEHEADYMATDIQLGDRRLSFTMNRKGTALGTIELSVPGKHNVYNAMATVISCLEAGIPFEQIAATIVEFHGAKRRFQVIGDLHDVLVVDDYAHHPTEIIATLQAAKSTGKRIVAVFQPQRYTRTYFLLDQFSRAFSDADEVIIPDIYSPAGEKRIEGIDSQKLVELIKTNSNKNAKYLPSKDEISSYLLDAVKPGDIVITMGAGDVWKIATALVAALKESSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKE6</accession>
    <name>E3EKE6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF87 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385887.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0079"/>
    <dbReference type="EnsemblBacteria" id="ADO59473">
        <property type="protein sequence ID" value="ADO59473"/>
        <property type="gene ID" value="PPSC2_27705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5870"/>
    <dbReference type="eggNOG" id="COG0433">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_449668_0_0_9"/>
    <dbReference type="OMA" id="TDEAHNF"/>
    <dbReference type="OrthoDB" id="600220at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008571">
        <property type="entry name" value="HerA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002789">
        <property type="entry name" value="HerA_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42957">
        <property type="entry name" value="PTHR42957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01935">
        <property type="entry name" value="DUF87"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF87" evidence="1">
        <location>
            <begin position="177"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="615" mass="69671" checksum="1D6626BEAFB169D9" modified="2011-01-11" version="1">MNPEMYVVGRTTPKEVMVASVKRRLVQDEYLLIKDPFYGDLIAEIIETKLYPQVLTGTFTAESCVFQSLQELEMIQAGVSICIAKVKLLDEITMPVTTHSVVTTPEFEDVEELLVPTHPNKGFSLGVIRGTERIQKLLPDYLRNLIPLFERGKGVIPQNGVPFIMSYYNLREYPGVGFFGGTGSGKTNALRVYCEEIMRHSIPGVAFDPHNELEFKEPTPGLSDEHICDFSAKHEIFHIGENVGINFSELMTEDLLYLLEFVGDLTMPMRGAIESLHQKNDSFTTLSNRIADLKRAFEFQELPKHERNHESLPAESVALYERFRDKVSGLPTLQAVTWRLDQLNKTKIFNHDISKIEACMLKRKLAVIRGKVSQLKMLASYVTRKLYGKRRAYQDWKANHQGIDMPAKFPPFFIITDESHIFAPEGERSNPTKTILREVSQEARKYGVFLVLGTQRPALLDKTIASMLNVKFIFRTGIESDMKMIQTETNLNAEQFARLPDLPTGNAFVSSATLKKTFYIRVRTTKTVSPHSGHPFDELDDFGGVGEKLRSVLISSLPLSVDTIPKKNVEVSKAMGRMMSVHEILDALEELYLSNEIAKEESPFGTRFKALNTKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKE8</accession>
    <name>E3EKE8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385889.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0081"/>
    <dbReference type="EnsemblBacteria" id="ADO59475">
        <property type="protein sequence ID" value="ADO59475"/>
        <property type="gene ID" value="PPSC2_27695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5868"/>
    <dbReference type="HOGENOM" id="CLU_2357111_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="10"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="11215" checksum="08360D223556A2F3" modified="2011-01-11" version="1">MTEHHHAVNNEELVAKLQRVEKALKASEQLKMKAIAKKGAYEQQLKDNESELKLLGTTPEKAEQEVREIEIEIQRTLEKIEGMIPFELLERYKMLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKL8</accession>
    <name>E3EKL8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386264.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0461"/>
    <dbReference type="EnsemblBacteria" id="ADO59850">
        <property type="protein sequence ID" value="ADO59850"/>
        <property type="gene ID" value="PPSC2_25940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5452"/>
    <dbReference type="HOGENOM" id="CLU_2035713_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="14674" checksum="DC93C93ECFCC709F" modified="2011-01-11" version="1">MNNRWRQIKRLPIPVSKFFDLYYNEQPDPPCPVCGGKVLHRHYYDEHVGIAETVDECTECNYYETESYGDTRLEVGKWSAVYHYTTSDKEISQIRGEFVRQQILEKERRKTERRKYYRKRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC81</accession>
    <name>A0A0D5ZC81_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-366</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-366</name>
        <name evidence="1" type="ORF">PPSC2_01155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0228"/>
    <dbReference type="EnsemblBacteria" id="AKA44176">
        <property type="protein sequence ID" value="AKA44176"/>
        <property type="gene ID" value="PPSC2_01155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.219"/>
    <dbReference type="HOGENOM" id="CLU_1946674_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="15348" checksum="33B79C78BE23D63C" modified="2015-05-27" version="1">MRELKQQTKARAFMYFGYHICYNWEECSSMNREVIQMKQVGDQSLFLPEFQRLIGSQKFDFMAINEDENEMVIRLRKQDGSERIQKRERLLKALEQPGGVLKRYPGASEELHAIARRDEEDDRDGSHFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCC3</accession>
    <name>A0A0D5ZCC3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">VanZ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21960"/>
    <dbReference type="EnsemblBacteria" id="AKA44224">
        <property type="protein sequence ID" value="AKA44224"/>
        <property type="gene ID" value="PPSC2_09490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09490"/>
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    </dbReference>
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    <dbReference type="OrthoDB" id="1262421at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006976">
        <property type="entry name" value="VanZ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04892">
        <property type="entry name" value="VanZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="VanZ" evidence="2">
        <location>
            <begin position="16"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="16849" checksum="63C49A44CA403399" modified="2015-05-27" version="1">MSGNRLFYNVAFVLLILYTGLLLYWMFLGFGRTLRPGPPYSYNMVPLDTIGRYWRAMYSSPFRVWGVNLLGNIGVFIPFGVLLPIIWVSMRKVGRLLLVVVAALVILEVNQMLLGAGTMDVDDIILNVLGVLCGRVAYVFLRKKLRTES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCH0</accession>
    <name>A0A0D5ZCH0_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="3" type="ORF">PPSC2_11930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44237.1"/>
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    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2542"/>
    <dbReference type="EnsemblBacteria" id="AKA44237">
        <property type="protein sequence ID" value="AKA44237"/>
        <property type="gene ID" value="PPSC2_11930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2527"/>
    <dbReference type="eggNOG" id="ENOG503057Y">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1061073_0_0_9"/>
    <dbReference type="OrthoDB" id="1430668at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025453">
        <property type="entry name" value="DUF4309"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14172">
        <property type="entry name" value="DUF4309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5002300477" evidence="2">
        <location>
            <begin position="40"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="28281" checksum="AC789B323ACB0E6D" modified="2015-05-27" version="1">MKPTHQSRNRKKLACKLVTTSALLAIGFAVMTGCGNSGEANSTAPSTTKSATPSASNSTDQNTDIHTNEQDTHTNKTSTDLSKPSVDAGSSKGSSKNTGKEFDQGSTSTQHKPASSTASPDSKYSSAAAILSAAKQGTLPNLPKGLGLGTSSDLLFELWGKSDSGSTGPMRSYAKYHTDLVLDGNDKVTEITSSDSKYKKLLIKQVIDELGQPTETVDTSRDISGTAEANYKINNTSGLSYYLVFSYQTKTQKVSYVRLYFNSMTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCK1</accession>
    <name>A0A0D5ZCK1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44306">
        <property type="protein sequence ID" value="AKA44306"/>
        <property type="gene ID" value="PPSC2_20860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4448"/>
    <dbReference type="HOGENOM" id="CLU_2881682_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7464" checksum="6100DF967DE98BF8" modified="2015-05-27" version="1">MRAFNIPQLRLQEDIFRNNFADVRWYGGNLAPLRIAEFKSELIEGRTFVDTKQTTRELDCINM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCN0</accession>
    <name>A0A0D5ZCN0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_20905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675777.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44307">
        <property type="protein sequence ID" value="AKA44307"/>
        <property type="gene ID" value="PPSC2_20905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4459"/>
    <dbReference type="eggNOG" id="ENOG502ZFNP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117608_0_0_9"/>
    <dbReference type="OrthoDB" id="2094298at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="131"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="16363" checksum="8848726C2342D3C4" modified="2015-05-27" version="1">MFPIYPVNEANVAPHGGRMVCAVMRDGTRHIGILSGCSKGKLMLNGYPSSFPGSLYAGSYSNKGKQKAKKNSSKKQKKNSKNKARSSAKLNSFNRPPDELLNPYFPYNVGAFDSNGNRGYGNGRAGYRGRYGYGAGLALDLALIAFLFLLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-09-29" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCR7</accession>
    <name>A0A0D5ZCR7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SpoVT-AbrB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886189.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44364">
        <property type="protein sequence ID" value="AKA44364"/>
        <property type="gene ID" value="PPSC2_26830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5671"/>
    <dbReference type="HOGENOM" id="CLU_117609_0_0_9"/>
    <dbReference type="OrthoDB" id="1942483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="1">
        <location>
            <begin position="14"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="17475" checksum="88FFBF78689B4362" modified="2015-05-27" version="1">MKNTGMTRPLDHLGRIVIPKEMRISMNMKRGDPLELFIDTEKKMLGFKKYTGVSCRMCNSIEQLTYFKENLLCHECILELKEGKNLQEYPSDLKTQSKKIRTYKSDLLMNRLRDLMMKHPAYPQREYAKLLGISQCRVSQLKRRLEGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4C8</accession>
    <name>E3E4C8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidase M28</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_12660</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371272.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2701"/>
    <dbReference type="EnsemblBacteria" id="ADO56668">
        <property type="protein sequence ID" value="ADO56668"/>
        <property type="gene ID" value="PPSC2_12660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2690"/>
    <dbReference type="eggNOG" id="COG2041">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3391">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4447">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_346769_0_0_9"/>
    <dbReference type="OrthoDB" id="6942at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032109">
        <property type="entry name" value="Big_3_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16640">
        <property type="entry name" value="Big_3_5"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168536" evidence="2">
        <location>
            <begin position="32"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="619"/>
            <end position="682"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="685"/>
            <end position="748"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="749"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="529"/>
            <end position="587"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="529"/>
            <end position="573"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="814" mass="86064" checksum="2E512E726B4A3AF2" modified="2011-01-11" version="1">MMLRTRTRRFAALIAAAVTFTTLVPGLPASADASPNPMEGIVLTKHERLGPEGFGTISYEDGIFYLTGKNNRAYSDDGGSSWKKLYGNNAQMDTAGDGNGNFLTVVGSGGYIRWDTTTRALESFEKTIYYPGFKPSMPSVAYFKGSFYAAGYETATMPQLGRIFKLNDDGESWEHIAVQGPALENKRFNKIRTNGTTMVAVGEYGLIATSTDGVTWTQRESGSSQHLVDVTVPADGSPIMAVGMYNTITISEDGGETWQAYGFKYDDPDIYSVTYARGYYVISNEYGKILYSTDARNWSEFNHGFGRIGINAINIDLPGQMVLVSGGGLVYSVSKATTSTALASSANPASVEQEVVFTATVSKPSNSPVTAAPTGTVTFKNGESVLGSAPLTVGQATYSVSDLSIGTHQITAVYSGDGAFGTSASAPLGQVVTDAVPKKSTTTTVTSTRNPSTVGQSVTIHATVTGPSGTPTGTLTFKDGDTVLDAVPMTVGAATYSTTQFMVGVHPITVTYSGDVQFEGSTSATLHQTVNADDSGNSDNGSGGSGGGSGGGSDPTTGTTPTAQPTTPEQPDAQKPEGNGEIPQDPNDIFRSQVVRADSNVIAGVQARTAEILENGGQFASIQYNDLGDHWSIPNVEKLTKLGVIHGYPTGGFEPDAVITRAEFAAMIDRGFVDMASRKVEINEEDFAAFSDIEGHWSSDNLKQLVAVGVMTGYEDGTIRPEKLITRQEMALMITRVLNAYILNRDTSDVAFSDLDGAYGAEAIKKAAALGIFTGKTKQRFDPFAGATRAESLQTIINTYTLSPAIKEALDSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4E2</accession>
    <name>E3E4E2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">scrB2</name>
        <name evidence="7" type="ORF">PPSC2_12720</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371286.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00160"/>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56682">
        <property type="protein sequence ID" value="ADO56682"/>
        <property type="gene ID" value="PPSC2_12720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2705"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001528_7_0_9"/>
    <dbReference type="OMA" id="TPKMNAP"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006558">
        <property type="entry name" value="LamG-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00560">
        <property type="entry name" value="LamGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="LamGL" evidence="6">
        <location>
            <begin position="87"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="757" mass="85111" checksum="CF83C09892B6BD10" modified="2011-01-11" version="1">MSHATDNRGLIMYWAFNEGTGTSALESVSQVQDNIQYVFNQAEFTQPCPPRWRQGVIGNGLLFDGYSTYIAHSFDEGNQNTEPEYRSALSIGVWVAPRSYEWGDDGKLSAIVNRYNLDRKQGYLLGMFRHGSWSFQVGLEGGDWKELWSPDGHELPKNAWSYVNAVFDGNQGEIKLYLNGSEIASAAVPRGSRLAEAAETDLLIGKNNHSSLLAEVFSLHMFSGIIDELKIYNRALSAEEVAASYRHVLDTFHEGIRPQLNYDEIKLDRTPLLLDRHRPQYHVSPPAHWMNEPHAPIYFDGQYHLFYQHNPQGPFFHQIHWGHWVSQDLVHWRDLPVALAPEKDQLAPDGIWSGSATYDADGLPVLFFTAGNDSASPNQSVALARSTYTLDGNPDLVQWVKHPEPLIVQKKGMGAFGDFRDPFVWKDDDGWYALVGSGIEGGAALAFASQDMLNWTYKGPFFKADIQKFPYLGPIWELPVLLPLGRDKLGVNKHLLLVSPVGKGADVEVFYWIGQLDKQNLSFIPDQEKPQLIDVGDFHFTGPSGMVDPKTGRNIVFTIAQGDRTSEMEYKSGWAHNGGLPLSVYLRDDGRLGIEPIQELQSLRGPKRLSLRDQSLAETNVQLRNVHGDMLEIQLELEPGSAKKFGVKVRCTPDGEEETLLYYDWNQTMLLVDRSKTTLHPGEKCGGVQGGKLELLGENLKLHIYLDRSMVEAYANGLKSLTTRVYPSRMDALGLEIWGDGEPFVKSLDIWDMQSIW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4L5</accession>
    <name>E3E4L5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tnpIS3C</name>
        <name evidence="1" type="ORF">PPSC2_00485</name>
        <name evidence="2" type="ORF">PPSC2_07955</name>
        <name evidence="3" type="ORF">PPSC2_08005</name>
        <name evidence="4" type="ORF">PPSC2_13825</name>
        <name evidence="5" type="ORF">PPSC2_14690</name>
    </gene>
    <organism evidence="4 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0096"/>
    <dbReference type="EnsemblBacteria" id="ADO54083">
        <property type="protein sequence ID" value="ADO54083"/>
        <property type="gene ID" value="PPSC2_00485"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55660">
        <property type="protein sequence ID" value="ADO55660"/>
        <property type="gene ID" value="PPSC2_07955"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55670">
        <property type="protein sequence ID" value="ADO55670"/>
        <property type="gene ID" value="PPSC2_08005"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56914">
        <property type="protein sequence ID" value="ADO56914"/>
        <property type="gene ID" value="PPSC2_13825"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57098">
        <property type="protein sequence ID" value="ADO57098"/>
        <property type="gene ID" value="PPSC2_14690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00485"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07955"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08005"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13825"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1673"/>
    <dbReference type="eggNOG" id="COG2963">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027402_19_2_9"/>
    <dbReference type="OMA" id="IRNKIQV"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11820" checksum="C30D1F813B359FDD" modified="2011-01-11" version="1">MAKKGQSFRQYSLDVKMEAIRLVNEEHMSIREVTKHLDIRNKSQVQSWVTKYRAGENLQPTTTRQGRPKTKFSSMEEEMAYLRAEIEYLKKQYPNLHKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S0</accession>
    <name>E3E4S0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ypjG</name>
        <name evidence="1" type="ORF">PPSC2_14460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371647.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02110"/>
    <dbReference type="EnsemblBacteria" id="ADO57048">
        <property type="protein sequence ID" value="ADO57048"/>
        <property type="gene ID" value="PPSC2_14460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3086"/>
    <dbReference type="eggNOG" id="COG2120">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049311_3_1_9"/>
    <dbReference type="OMA" id="EIVLCNA"/>
    <dbReference type="OrthoDB" id="1282433at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019213">
        <property type="term" value="F:deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071793">
        <property type="term" value="P:bacillithiol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10320">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023842">
        <property type="entry name" value="Bacillithiol_biosynth_BshB1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003737">
        <property type="entry name" value="GlcNAc_PI_deacetylase-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024078">
        <property type="entry name" value="LmbE-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12993">
        <property type="entry name" value="PTHR12993"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02585">
        <property type="entry name" value="PIG-L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102588">
        <property type="entry name" value="SSF102588"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04001">
        <property type="entry name" value="thiol_BshB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="25397" checksum="234D387C88884F8A" modified="2011-01-11" version="1">MTLDILIFGAHADDAEIGMGGTIAKHTAAGLKVGVCDLTRAEMSSNGDVDTRMAEAEHASKVLGLAVRTNLGLPDRGLYVTPEHVAAVTAEIRRHAPKVVFAPYWEDRHPDHVMCSKLVEEAVFNAKLRRLMPESPAVQVEQLYFYFINDIGRTDLIVDITEHYEAKEQSLLSYASQFQAAPGKDMVSTPLNQGYVERVKARDSLLGQRKLISYAEGFASKTPHLVKLFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U2</accession>
    <name>E3E4U2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Indole-3-glycerol phosphate synthase</fullName>
            <shortName evidence="11">IGPS</shortName>
            <ecNumber evidence="4 11">4.1.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">trpC</name>
        <name evidence="13" type="ORF">PPSC2_14565</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate + H(+) = (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + CO2 + H2O</text>
            <dbReference type="Rhea" id="RHEA:23476"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58613"/>
            <dbReference type="ChEBI" id="CHEBI:58866"/>
            <dbReference type="EC" id="4.1.1.48"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 4/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the TrpC family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.48" evidence="4 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371667.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02215"/>
    <dbReference type="EnsemblBacteria" id="ADO57070">
        <property type="protein sequence ID" value="ADO57070"/>
        <property type="gene ID" value="PPSC2_14565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3108"/>
    <dbReference type="eggNOG" id="COG0134">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034247_2_0_9"/>
    <dbReference type="OMA" id="RGPHDLI"/>
    <dbReference type="OrthoDB" id="1789381at2"/>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00043"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004425">
        <property type="term" value="F:indole-3-glycerol-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00331">
        <property type="entry name" value="IGPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00134_B">
        <property type="entry name" value="IGPS_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045186">
        <property type="entry name" value="Indole-3-glycerol_P_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013798">
        <property type="entry name" value="Indole-3-glycerol_P_synth_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001468">
        <property type="entry name" value="Indole-3-GlycerolPSynthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22854">
        <property type="entry name" value="PTHR22854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00218">
        <property type="entry name" value="IGPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00614">
        <property type="entry name" value="IGPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 11" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7 11" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="10 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="IGPS" evidence="12">
        <location>
            <begin position="3"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00018080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="29164" checksum="46A6411AEDFD2DC6" modified="2011-01-11" version="1">MYLDKIVVTKRQEVEQLKQHFQINKAERLIADLPVTRGFENALASGRNRPLGLIAEVKKASPSKGLIRPDFYPVDIARAYEGAGADCISVLTDVTYFQGSPEYLQQIRDQVKIPLLRKDFIIDERQIYEARLLGADAVLLIAAILEPHVLGSFLQIAKDLGLDALVEVHDSEELKTVLDLGTATLIGVNNRNLRTFETRLQTTEELISLIPKGVTFISESGIAGPEDVKYLHSVGAHGILVGEHLMRKEDVGQAVAELMDGVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4V1</accession>
    <name>E3E4V1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Chorismate dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.151</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Menaquinone biosynthetic enzyme MqnA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mqnA</name>
        <name evidence="4" type="ORF">PPSC2_14610</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the dehydration of chorismate into 3-[(1-carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>chorismate = 3-[(1-carboxyvinyl)-oxy]benzoate + H2O</text>
            <dbReference type="Rhea" id="RHEA:40051"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29748"/>
            <dbReference type="ChEBI" id="CHEBI:76981"/>
            <dbReference type="EC" id="4.2.1.151"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Quinol/quinone metabolism; menaquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the MqnA/MqnD family. MqnA subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.151" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371676.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02260"/>
    <dbReference type="EnsemblBacteria" id="ADO57079">
        <property type="protein sequence ID" value="ADO57079"/>
        <property type="gene ID" value="PPSC2_14610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3117"/>
    <dbReference type="eggNOG" id="COG1427">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059898_0_0_9"/>
    <dbReference type="OMA" id="WGLARTG"/>
    <dbReference type="OrthoDB" id="1062841at2"/>
    <dbReference type="UniPathway" id="UPA00079"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016836">
        <property type="term" value="F:hydro-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009234">
        <property type="term" value="P:menaquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00995">
        <property type="entry name" value="MqnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003773">
        <property type="entry name" value="Menaquinone_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030868">
        <property type="entry name" value="MqnA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37690">
        <property type="entry name" value="PTHR37690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02621">
        <property type="entry name" value="VitK2_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0474">Menaquinone biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="32272" checksum="66B3BB5E5F6DCCF3" modified="2011-01-11" version="1">MPIPDTKTITIGKIKYTNAWPIFHYFNPSELLHSAEMVSKVPAELNRGMLNGSLDMSAMSSFAYASGAEEMLLLPDLSVSADGPVQSILLFSRKPLNEIINGTIALTNTSATSVNLLKILMQKAWEGQPTYFDCEPDLDLMLEQADAGLLIGDHAIKASWRSEGLYVTDLGEEWKRWTGYSMTFAVWAVRRAVAAQNPAVVAEIASAFRVSKQRSLSDLAPVISEACKEIGGSEDYWERYFTNLCYDFGEKQQQGLELYFQYAYELGLLDRRVKPLLWSDNTLTRVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y6</accession>
    <name>E3E4Y6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stage III sporulation protein AC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoIIIAC</name>
        <name evidence="2" type="ORF">PPSC2_15140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_010345636.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02760"/>
    <dbReference type="EnsemblBacteria" id="ADO57194">
        <property type="protein sequence ID" value="ADO57194"/>
        <property type="gene ID" value="PPSC2_15140"/>
    </dbReference>
    <dbReference type="GeneID" id="66576956"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3231"/>
    <dbReference type="eggNOG" id="ENOG5032ZY3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_194471_2_0_9"/>
    <dbReference type="OMA" id="HWVTLIG"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009570">
        <property type="entry name" value="Spore_III_AC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025664">
        <property type="entry name" value="Spore_III_AC/AD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06686">
        <property type="entry name" value="SpoIIIAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02848">
        <property type="entry name" value="spore_III_AC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7632" checksum="12DE8D885C62ECC8" modified="2011-01-11" version="1">MNLEVNAIFQIAGIGIIIAMIHTVLKQMGKEDMAHWVTVIGFVVVLFMVVRMLDNLLQEIKSIFLFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5E5</accession>
    <name>E3E5E5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YrhF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yrhF</name>
        <name evidence="2" type="ORF">PPSC2_17340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372245.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04680"/>
    <dbReference type="EnsemblBacteria" id="ADO57664">
        <property type="protein sequence ID" value="ADO57664"/>
        <property type="gene ID" value="PPSC2_17340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3705"/>
    <dbReference type="eggNOG" id="COG5609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_153655_0_0_9"/>
    <dbReference type="OMA" id="IHTVFVE"/>
    <dbReference type="OrthoDB" id="1905326at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018745">
        <property type="entry name" value="MpsC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10057">
        <property type="entry name" value="MpsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MpsC" evidence="1">
        <location>
            <begin position="3"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="13412" checksum="29737600F4668689" modified="2011-01-11" version="1">MRKETGFNEIIRKVRKELFGKGPERIHTTFVDNMAITMLYGNLTPSEKFLAQEVAGREMVHAARTKMVQKIYPVQFNKELEEYMDSRLLHLFSDIKVEEDIAISVFVFEDNIAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5G7</accession>
    <name>E3E5G7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Aminotransferase</fullName>
            <ecNumber evidence="2">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">patA</name>
        <name evidence="4" type="ORF">PPSC2_17445</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372267.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04785"/>
    <dbReference type="EnsemblBacteria" id="ADO57686">
        <property type="protein sequence ID" value="ADO57686"/>
        <property type="gene ID" value="PPSC2_17445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3727"/>
    <dbReference type="eggNOG" id="COG0436">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_4_3_9"/>
    <dbReference type="OMA" id="SQGANQY"/>
    <dbReference type="OrthoDB" id="554560at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="3">
        <location>
            <begin position="31"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="387" mass="42820" checksum="B720EDEC3BB485C4" modified="2011-01-11" version="1">MEHLLNDQVKNIQISGIRKIANKVAALPGTLSLTIGQPDFPTPAHIMEAAHRAIDEGRTTYTPNPGLPELREAAAAFVARKYGLNYRGLDEVIVTNGASEALDITLRTILSPGDEVILPVPIYPGYEPLIRLSGGIPVLADTRNSGFKLTAEVLEPYLTERTKAVILGYPSNPTGRVMSRKELEAVADLLKERDLFIITDEIYSELIYDTPHVSIATLPSMRERTIVINGLSKSHSMTGWRIGFTLAPAEITQHMVKVHQYNVTCASSISQYAALEALTVGVDDALPMREEYRKRRDYVHKRLTDMGIPLEKPEGAFYLFPSIAHFGLSSMDFTLKLLEEQGVAVVPGDAFSSYGEGYIRLSYAYGQDVLEQGLDKIERFVRGIVRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5M1</accession>
    <name>E3E5M1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372477.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3947"/>
    <dbReference type="EnsemblBacteria" id="ADO57898">
        <property type="protein sequence ID" value="ADO57898"/>
        <property type="gene ID" value="PPSC2_18420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3946"/>
    <dbReference type="HOGENOM" id="CLU_2956307_0_0_9"/>
    <dbReference type="OrthoDB" id="1768985at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6977" checksum="0211AD60E5668E89" modified="2011-01-11" version="1">MLKNKDPRYASFQSKLKKLKKKYPGLQFDFIRVETDVKITKTGFGVDELKVKDWNKVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5V5</accession>
    <name>E3E5V5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">dITP/XTP pyrophosphatase</fullName>
            <ecNumber evidence="6">3.6.1.66</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Non-canonical purine NTP pyrophosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Non-standard purine NTP pyrophosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Nucleoside-triphosphate diphosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Nucleoside-triphosphate pyrophosphatase</fullName>
            <shortName evidence="6">NTPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">asnO</name>
        <name evidence="8" type="ORF">PPSC2_19760</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>H2O + ITP = diphosphate + H(+) + IMP</text>
            <dbReference type="Rhea" id="RHEA:29399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="ChEBI" id="CHEBI:61402"/>
            <dbReference type="EC" id="3.6.1.66"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>H2O + XTP = diphosphate + H(+) + XMP</text>
            <dbReference type="Rhea" id="RHEA:28610"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:61314"/>
            <dbReference type="EC" id="3.6.1.66"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>dITP + H2O = dIMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:28342"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61194"/>
            <dbReference type="ChEBI" id="CHEBI:61382"/>
            <dbReference type="EC" id="3.6.1.66"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the HAM1 NTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.66" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372746.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06980"/>
    <dbReference type="EnsemblBacteria" id="ADO58174">
        <property type="protein sequence ID" value="ADO58174"/>
        <property type="gene ID" value="PPSC2_19760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4212"/>
    <dbReference type="eggNOG" id="COG0127">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082080_0_2_9"/>
    <dbReference type="OMA" id="DCFADDT"/>
    <dbReference type="OrthoDB" id="1824064at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035870">
        <property type="term" value="F:dITP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036220">
        <property type="term" value="F:ITP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017111">
        <property type="term" value="F:nucleoside-triphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036222">
        <property type="term" value="F:XTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009117">
        <property type="term" value="P:nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009146">
        <property type="term" value="P:purine nucleoside triphosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00515">
        <property type="entry name" value="HAM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01405">
        <property type="entry name" value="Non_canon_purine_NTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020922">
        <property type="entry name" value="dITP/XTP_pyrophosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002637">
        <property type="entry name" value="Ham1p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11067">
        <property type="entry name" value="PTHR11067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01725">
        <property type="entry name" value="Ham1p_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00042">
        <property type="entry name" value="TIGR00042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="12"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="165"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="193"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="22492" checksum="7F50274C2C3AFE81" modified="2011-01-11" version="1">MRLDGPVVIVATKNKGKVREFAHAFAPFGKEVRSMYDYPDIPDVVEDGTTFAENALKKAKAVGDVLGLPVLADDSGLCVDLLDGAPGVYSARYAGEGASDHENNIKLLDVLESKQLGDDTGQPLLSPAQFVCTLILYNPQTGETLESTGSVEGWITTETAGSGGFGYDPLFYLPEFEKTMAELTLEQKQAISHRGIALRNLATKLGNPQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5V6</accession>
    <name>E3E5V6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribonuclease PH</fullName>
            <shortName evidence="4">RNase PH</shortName>
            <ecNumber evidence="4">2.7.7.56</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">tRNA nucleotidyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rph</name>
        <name evidence="7" type="ORF">PPSC2_19765</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>phosphate + tRNA(n+1) = a ribonucleoside 5'-diphosphate + tRNA(n)</text>
            <dbReference type="Rhea" id="RHEA:10628"/>
            <dbReference type="Rhea" id="RHEA-COMP:17343"/>
            <dbReference type="Rhea" id="RHEA-COMP:17344"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:173114"/>
            <dbReference type="EC" id="2.7.7.56"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homohexameric ring arranged as a trimer of dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the RNase PH family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.56" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372747.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06985"/>
    <dbReference type="EnsemblBacteria" id="ADO58175">
        <property type="protein sequence ID" value="ADO58175"/>
        <property type="gene ID" value="PPSC2_19765"/>
    </dbReference>
    <dbReference type="GeneID" id="66576111"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4213"/>
    <dbReference type="eggNOG" id="COG0689">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050858_0_0_9"/>
    <dbReference type="OMA" id="KGKGQGW"/>
    <dbReference type="OrthoDB" id="1824064at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000175">
        <property type="term" value="F:3'-5'-exoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009022">
        <property type="term" value="F:tRNA nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016075">
        <property type="term" value="P:rRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11362">
        <property type="entry name" value="RNase_PH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00564">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015847">
        <property type="entry name" value="ExoRNase_PH_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036345">
        <property type="entry name" value="ExoRNase_PH_dom2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002381">
        <property type="entry name" value="RNase_PH_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018336">
        <property type="entry name" value="RNase_PH_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03725">
        <property type="entry name" value="RNase_PH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55666">
        <property type="entry name" value="SSF55666"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01966">
        <property type="entry name" value="RNasePH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01277">
        <property type="entry name" value="RIBONUCLEASE_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 4" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 4" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2 4" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="RNase_PH" evidence="5">
        <location>
            <begin position="11"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="RNase_PH_C" evidence="6">
        <location>
            <begin position="161"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate (substrate) binding" evidence="4">
        <location>
            <begin position="125"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <note>substrate</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="27292" checksum="DF7DD0148AF96366" modified="2011-01-11" version="1">MSRSNGRNGDELRPMKLTAGVNKYAEGSVFIEVGETKVICTATVEERVPPFMKGQGKGWVTAEYSMLPRATHSRNQREAARGKLTGRTMEIQRLIGRALRSVVNLQALGERTITLDCDVIQADGGTRTTSITGSFVALAIAVNKIAIQHKLPVFPITDFLASVSVGVVGDKALLDLNYEEDSKAKVDMNLVMTGSGKYVELQGTGEESPFDRQELDQLLSLGEQGILQMIERQKEVLGPIADKIGAGRTGAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5X0</accession>
    <name>E3E5X0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372761.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4239"/>
    <dbReference type="EnsemblBacteria" id="ADO58189">
        <property type="protein sequence ID" value="ADO58189"/>
        <property type="gene ID" value="PPSC2_19835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4227"/>
    <dbReference type="eggNOG" id="ENOG5033QTR">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1179299_0_0_9"/>
    <dbReference type="OMA" id="YLWDAVE"/>
    <dbReference type="OrthoDB" id="942099at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021466">
        <property type="entry name" value="Put_rhamnosyl_transferase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11316">
        <property type="entry name" value="Rhamno_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="26994" checksum="2EA91DF40FA82DA2" modified="2011-01-11" version="1">MNRKIVIEINFNNYGMNPNRLTREWISERLDIFRTFTLRSLLNQTNADFLSVVKLAGGCSDIVEEELAQREPIPEHIRFGTSIESKRRINAYIEGADELLIARIDSDDLYHQSFVQQLHDYKFQPDTVALVNQMGYLWDAVEGQMAPVFHRSPSFYVFRYQVEEFLNDYRVVIPGKGTHGYVTELPHEVIPLRNYVNVIHAANTSVKKVPAKDRLSENEMNAVLAEFLGTGIANS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E611</accession>
    <name>E3E611_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372802.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4280"/>
    <dbReference type="EnsemblBacteria" id="ADO58230">
        <property type="protein sequence ID" value="ADO58230"/>
        <property type="gene ID" value="PPSC2_20025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4267"/>
    <dbReference type="HOGENOM" id="CLU_2424184_0_0_9"/>
    <dbReference type="OrthoDB" id="1379602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="10510" checksum="9BD15DB548A14771" modified="2011-01-11" version="1">MEGEEHSIRLDQLRLYHARWDECIATLQQHLAMPQARWADKRSALYGLGALACYELGLMHKACEFAKEATERSPEDSRLSHNYALIRARLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E699</accession>
    <name>E3E699_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">VPS10 domain-containing receptor SorCS3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sorCs3</name>
        <name evidence="4" type="ORF">PPSC2_13210</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371388.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00885"/>
    <dbReference type="EnsemblBacteria" id="ADO56784">
        <property type="protein sequence ID" value="ADO56784"/>
        <property type="gene ID" value="PPSC2_13210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2812"/>
    <dbReference type="eggNOG" id="COG4447">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_660301_0_0_9"/>
    <dbReference type="OMA" id="GGANWRI"/>
    <dbReference type="OrthoDB" id="1293876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028203">
        <property type="entry name" value="PSII_CF48-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14870">
        <property type="entry name" value="PSII_BNR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168190" evidence="2">
        <location>
            <begin position="25"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="domain" description="PSII_BNR" evidence="3">
        <location>
            <begin position="121"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="416" mass="45574" checksum="2F45AB014AAF2903" modified="2011-01-11" version="1">MKLRWRALLGGVMLLTGILLTACSAETPKTVTKPSIEEPDDQGQTITINPPVTPKAGDPNAKYVVQTRIADFHLIDNNKGLVWGVTHNELRLYDTHDGGKTWNNISPSENVQFQDKLEYGKDISFTDSRHGWVVRQNLDQTATVILRTSDGGQSWDVSALPSGDHVSSIQYVNPTTGWIMAYIKLNEQDQQKMLYHTTDGGATWNKVAQSSGTTSNKSGSGLPDQGSVAGMSFSSNNQGFVAINVDSRVKLYKTSNLGKTWTPVANSMQGCPQAKAEAQQSLEGNSSSYWIPVLCYGDNGTKYNGLFTNNTGTQWNDVPLGLSSNNTSITPGRTFLSDKEGWVITVNGMSRTMDGGKTWTSLRGNKVLPSKLKDYPRSVKLRFASSSVGWLLLERLDDKKSLLLKTTDGGANWRIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6J3</accession>
    <name>E3E6J3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-N-acetylglucosamine 4,6-dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">capD</name>
        <name evidence="3" type="ORF">PPSC2_20125</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the polysaccharide synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372825.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07375"/>
    <dbReference type="EnsemblBacteria" id="ADO58253">
        <property type="protein sequence ID" value="ADO58253"/>
        <property type="gene ID" value="PPSC2_20125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4289"/>
    <dbReference type="eggNOG" id="COG1086">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013560_4_1_9"/>
    <dbReference type="OMA" id="HEVMIPK"/>
    <dbReference type="OrthoDB" id="662797at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd05237">
        <property type="entry name" value="UDP_invert_4-6DH_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003869">
        <property type="entry name" value="Polysac_CapD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02719">
        <property type="entry name" value="Polysacc_synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Polysacc_synt_2" evidence="2">
        <location>
            <begin position="7"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="36642" checksum="16100538A00E8086" modified="2011-01-11" version="1">MFENQRILVTGGTGSWGHELVTQLLPRNPKEVIIYSRGESSQVAMNRQFEDERLSFCIGDIRDKDALVTACQGVDYVFHLAALKHVPVCEDQPYEALKTNVVGTQNVIEAAVANQVKKVIYISTDKAANPSNFYGMTKAIGEKLIVYANLLNSDTRFVTVRGGNVLGTNGSVVHLFQNQIRQKGKVSITDMKMTRFFLTLRDAISLLFKASVESVGGEIFIMTMPTCRILDLAEVLIEDSGVENVEIVEQGVRPGEKIHEILMSNFESLTTVVYDEQYLVILPTLNIPQLRDRYSQCPPVSFSSFSSEFNLMSKEEIRTILRSGGFIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6U6</accession>
    <name>E3E6U6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Iron ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fhuG7</name>
        <name evidence="8" type="ORF">PPSC2_21335</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373066.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08560"/>
    <dbReference type="EnsemblBacteria" id="ADO58498">
        <property type="protein sequence ID" value="ADO58498"/>
        <property type="gene ID" value="PPSC2_21335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4535"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_0_9"/>
    <dbReference type="OMA" id="GAPCFVW"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="120"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="193"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="240"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="278"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="307"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="35460" checksum="6DB4E79CDACAACA2" modified="2011-01-11" version="1">MAMNKLQRARRRTIAWIILPILLLAVSVYGLAYGSVSIPLQEINQVLLHNDESTYRTILMDLRLPRVLVGLLVGACLAASGALLQGVMKNPLADPGIIGVSAGGGLAAVITMVMLPQLSYLLPVTAFLGAFLSAIVIYLLAWDRGASPVKIVLAGVAINALLGALTNGVMVMYSDRVQAVLPWLSGGLNGRSWHHLEFMAPYAIIGLIASLFAIKPANLLLLGDDSAQLLGQRVELQRMLIILLSALLAGTAVSVAGLIGFVGLVVPHVIRLLIGEDYRFLLPLSIVGGGTLVVLADTVARSWFDPIELPVGILLAVIGAPFFLILLKKRGNFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7E5</accession>
    <name>E3E7E5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Beta-xylosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xylA5</name>
        <name evidence="1" type="ORF">PPSC2_24460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373690.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11950"/>
    <dbReference type="CAZy" id="GH52">
        <property type="family name" value="Glycoside Hydrolase Family 52"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59156">
        <property type="protein sequence ID" value="ADO59156"/>
        <property type="gene ID" value="PPSC2_24460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5180"/>
    <dbReference type="eggNOG" id="COG3170">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_390212_0_0_9"/>
    <dbReference type="OMA" id="WLSKIYL"/>
    <dbReference type="OrthoDB" id="370490at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009044">
        <property type="term" value="F:xylan 1,4-beta-xylosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000852">
        <property type="entry name" value="Glyco_hydro_52"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03512">
        <property type="entry name" value="Glyco_hydro_52"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00845">
        <property type="entry name" value="GLHYDRLASE52"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="732" mass="81536" checksum="7713393184F7860E" modified="2011-01-11" version="1">MSKNIFYNTQHAPIGSFSSFTLGFKGNRGGLGLELGKPADENVYIGLQSRDGGSYEALPFFASTQDESTRYDVEKKDKKTEPLLVAFADQDITRELKAGTDTWQAGDLTFRLYSPVRPVPEPGIAGIDELRAALVPAVFAELTIDNTEGAAARRAFFGYQGSDPYSGIRIIGEDPRRDATESTQLEERLTGIGQGRSTAIVTNSSEAIPASGFAMEKLLGETMAENLSFGLGTTGALLMDVPAGEKRTYSFAICFYRGGIVTTGIEASYYYTRLFKDIEDVGTYALKHFTDLTAACIQGNDWIESANLSPDQEFMLAQAIHSYYGSTQLLSQQEDGEPIWIVNEGEYRMMNTLDLTADQLYYELILNPWTVRNELEWFVQRYSYRDEVRFPGEEQSYPGGITFTHDMGVANVFSRQGYSCYELAGIDDCFSYMSHEELVNWLCCATVYIEQTQDQSFTTRMLPVLCDCFESMLRRDHPDPAQRNGLMGLDSSRTQGGAEITTYDSLDVSLGQSRNNIYLGSKCWAVYVALEKIFASKGLNSLSQEAGSQADKCAASITAHMTDKGYIPAVIKEGNDSQIIPAIEGLIFPYFTGCEDALEPDGRFGEYIQALRRHLQTVLVPGVCLFEDGGWKLSSTSNNSWLSKIYLSQFIARELLELPWQETGQAADAAHVSWLLHPEESYWCWSDQMLSGIAHGSKYYPRGVTAILWLYEGKGNRLTLPQHMSQDEKQHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7F9</accession>
    <name>E3E7F9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pectate lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pelL</name>
        <name evidence="3" type="ORF">PPSC2_24525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373703.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12005"/>
    <dbReference type="CAZy" id="PL9">
        <property type="family name" value="Polysaccharide Lyase Family 9"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59170">
        <property type="protein sequence ID" value="ADO59170"/>
        <property type="gene ID" value="PPSC2_24525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5195"/>
    <dbReference type="eggNOG" id="COG3266">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030634_0_0_9"/>
    <dbReference type="OMA" id="DSHHNYD"/>
    <dbReference type="OrthoDB" id="1177619at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168610" evidence="1">
        <location>
            <begin position="35"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="domain" description="Beta_helix" evidence="2">
        <location>
            <begin position="153"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="449" mass="46988" checksum="9E2480780B7A2028" modified="2011-01-11" version="1">MFKRNDRSKNGFNALRLGVSFVLASSCLIGTAYADVPSNNLPSTTLTEEAVSATDSAAASTTLAAGDLYVAPNGNVSNPGTISSPTTLEAALTQIAPGKTIYLRGGNYAYSSTITIQRGNNGSNGSLKGLVAYGSEKPVLDFSAQAFGSANRGLQLNGDFWLVKGLEVKGAGDNGIYIGGSNNRIENVETHHNRDTGLQLGRYSPNASTSEWPANNLILNSYSHDNADPDNGEDADGFAAKLTVGSGNVFDNCLAAYNVDDGWDLYSKTETGPIGAVTILNSVAHHNGQTSDGTSTANSDGNGFKLGGDKIKVNHIVKNSIAFQNKKHGFTYNSNPGTITLTNNTSWDNGQSNFAFDKGEHVFINNLSFEGTASDKTSGTDQDNSNVWWKNKKTTNAKGLAASADDFVSLVPSITRGADGSIQLGDFLKLAKGSDLIGSGTPSGNIGAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E806</accession>
    <name>E3E806_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spore maturation protein B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spmB</name>
        <name evidence="2" type="ORF">PPSC2_14790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02425"/>
    <dbReference type="EnsemblBacteria" id="ADO57119">
        <property type="protein sequence ID" value="ADO57119"/>
        <property type="gene ID" value="PPSC2_14790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3156"/>
    <dbReference type="eggNOG" id="COG0700">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127717_0_0_9"/>
    <dbReference type="OMA" id="EPIMAWI"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="12948" checksum="854D97701324ADE4" modified="2011-01-11" version="1">MMVAISIFRASGALDYVISWVTPWIKNWGVPGEVLPLGLLRPLTGTGSLAFTTDLIRTYGPDSMIGRIASTIQGSTDTTLYVLTVYFGAVGIRNGRYALKVGLFSDVVGFVAAIAICLLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E855</accession>
    <name>E3E855_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE4</name>
        <name evidence="2" type="ORF">PPSC2_15020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371761.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3209"/>
    <dbReference type="EnsemblBacteria" id="ADO57168">
        <property type="protein sequence ID" value="ADO57168"/>
        <property type="gene ID" value="PPSC2_15020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3205"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097065_0_0_9"/>
    <dbReference type="OMA" id="LNGWDFS"/>
    <dbReference type="OrthoDB" id="1664438at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="50"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27941" checksum="882D55A8696D2BAC" modified="2011-01-11" version="1">MNSIEYKEFYDKVGKINGWDFSNVKCISEGVKWDFYNEVSKTCKKSDILLDIGTGGGEAILSITASALLLVGIDQSAGMIDTARKNSTEADIANVRFLQMDAENLNFPKEFFNVISSRHSCFSAKEIAKVLVKGGIFLTQQVSENDKLNIKEAFGRGQALGTKKDSLKTQCITDLNEAGFNDIQSFEFNATEYYQTPADLVFLLKHTPIIPDFGQKQMDFEILQQFILDNQTPKGIRTNAERFMIIARK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E886</accession>
    <name>E3E886_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Stage V sporulation protein E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ftsW1</name>
        <name evidence="8" type="ORF">PPSC2_15545</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371867.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03195"/>
    <dbReference type="EnsemblBacteria" id="ADO57278">
        <property type="protein sequence ID" value="ADO57278"/>
        <property type="gene ID" value="PPSC2_15545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3320"/>
    <dbReference type="eggNOG" id="COG0772">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029243_0_1_9"/>
    <dbReference type="OMA" id="KLWWSNL"/>
    <dbReference type="OrthoDB" id="1133883at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013437">
        <property type="entry name" value="FtsW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001182">
        <property type="entry name" value="FtsW/RodA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30474">
        <property type="entry name" value="PTHR30474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01098">
        <property type="entry name" value="FTSW_RODA_SPOVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02614">
        <property type="entry name" value="ftsW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="16"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="84"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="116"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="149"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="174"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="198"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="289"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="327"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="360"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="420" mass="46006" checksum="EAAD422893A920C2" modified="2011-01-11" version="1">MRNTKPETRRRGTPDFQLLILTLLLVGFGVIMVFSSSSSVALLNKEYNFDSLYFVKRQSAFAVLGLFIMLVAMNIKMEKYKKLFVPLFFITILLLIIVLFTGSLNGAKSWLRFGSIGFQPTELAKISIILYLSALIVKKGDRFRDLRTGYIPVTVIVGSVAGLIMLQPDLGSCFILVATSGLIIYAGGASVKHITASIILLVLGASIVFGIGSLFGGDSESANGQATAAKQDYKIGRFQAFLDPEKYRQGTGYNLVQSLQAIGEGGLNGSGFGKGIIKLHYLPNSFNDFIFSVIGEEFGFIGTAIFLMLYLYFIWRGMLIALRCHDPFGTLVGTGIMGLIAIQAFINIGGVTQTIPITGVTLPFISFGGSSLLVMMFSMGIMLSISRENTKQAVQERTTGVTVRNEVPTRFQTRRTNRYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8B5</accession>
    <name>E3E8B5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0637 protein PPSC2_15680</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yktB</name>
        <name evidence="2" type="ORF">PPSC2_15680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0637 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371894.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03330"/>
    <dbReference type="EnsemblBacteria" id="ADO57307">
        <property type="protein sequence ID" value="ADO57307"/>
        <property type="gene ID" value="PPSC2_15680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3348"/>
    <dbReference type="eggNOG" id="COG4493">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096059_0_0_9"/>
    <dbReference type="OMA" id="YKKLPHF"/>
    <dbReference type="OrthoDB" id="1333214at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01851">
        <property type="entry name" value="UPF0637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009403">
        <property type="entry name" value="UPF0637"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06335">
        <property type="entry name" value="DUF1054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021332">
        <property type="entry name" value="DUF1054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="23976" checksum="63F0C9849BB4FD20" modified="2011-01-11" version="1">MTFSGFTAKDFDVFEIPGLEPRMEVLIQQVRPKLEAIGEELAPFLTDLCGEPMHVHVAKHARRKVNPPIDTWVAWAANKRGYKALPHFEVGMFASHIFVIFAVIYESPNKITFAQALEANLSDVRSNIPGHFYWSMDHMDPKGTEQQQMDMEEFQTIINKLQQVKKAEVMCGLRIDRNDPLASDGAALLQTVRSTFEHLLPLYRMSFPKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8D5</accession>
    <name>E3E8D5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Beta-galactosidase</fullName>
            <shortName evidence="6">Beta-gal</shortName>
            <ecNumber evidence="3 6">3.2.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">lacA</name>
        <name evidence="13" type="ORF">PPSC2_15780</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.</text>
            <dbReference type="EC" id="3.2.1.23"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the glycosyl hydrolase 42 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371913.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03475"/>
    <dbReference type="CAZy" id="GH42">
        <property type="family name" value="Glycoside Hydrolase Family 42"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57327">
        <property type="protein sequence ID" value="ADO57327"/>
        <property type="gene ID" value="PPSC2_15780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3368"/>
    <dbReference type="eggNOG" id="COG1874">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012430_1_1_9"/>
    <dbReference type="OMA" id="HINNEYC"/>
    <dbReference type="OrthoDB" id="831762at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009341">
        <property type="term" value="C:beta-galactosidase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004565">
        <property type="term" value="F:beta-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013739">
        <property type="entry name" value="Beta_galactosidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013738">
        <property type="entry name" value="Beta_galactosidase_Trimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003476">
        <property type="entry name" value="Glyco_hydro_42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013529">
        <property type="entry name" value="Glyco_hydro_42_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36447">
        <property type="entry name" value="PTHR36447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02449">
        <property type="entry name" value="Glyco_hydro_42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08533">
        <property type="entry name" value="Glyco_hydro_42C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08532">
        <property type="entry name" value="Glyco_hydro_42M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001084">
        <property type="entry name" value="B-galactosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Glyco_hydro_42" evidence="10">
        <location>
            <begin position="24"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_42M" evidence="11">
        <location>
            <begin position="409"/>
            <end position="621"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_42C" evidence="12">
        <location>
            <begin position="632"/>
            <end position="690"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="320"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="161"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="328"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR001084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="695" mass="79193" checksum="A36DCD2C1365B997" modified="2011-01-11" version="1">MTYSNITKYPPISKRVPRMLHGADYNPEQWQQYPEVLAEDIRLMKLAKCNVMSVGIFSWVSLEPEEGVFTFEWLDRILDSFAENGIYAFLATPSGARPAWMSQKYPEVLRVEANRVRNLHGFRHNHCYTSPVYREKVRIMNTKLAERYANHPAVIGWHISNEFGGDCHCDHCQEAFRAWVQDKYGALDKLNHAWWTTFWSHTVTDWSQVESPAPHGETQVHAMNLDWRRFVTEQTADFIKHEIVPLKAENPDIPVTTNLMEFFEGLNYWKFADLLDVISWDSYPTWHDREGDDSRQAARVAMMHDIIRSIKGGKPWMLMESTPSLTNWQDVSKLKRPGMHLLSSLQAVAHGSDTVQYFQWRKSRGSSEKLHGAVVDHVGHEHTRVFGDVTDVGHALEKLEEVIGTSVPAEAAVIFDWENRWGINDSQGPRNKGVKYEETAEAHYLALWEQGVPVDVIHMDADFSKYKLLVAPMLYMVRSGVGERIQKFVENGGIFVATYWSGIVDEHDLCFLGGFPGPLRKTLGIWSEEIDGLHDHDRNYIIPVEGNELDLQGEYEAVELCDLIHTEGAEVLAEYGADFYAGRPALTVNRLGQGKAYYIASRNTGLFHSHFYKSLIDDAGLSKALDVQLPHGVNTAIRTDGVHDYIFVMNFTHEPQKLTLDGRTYSDLLENHVIADSSVQLGAYAVKVLKAERNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8H3</accession>
    <name>E3E8H3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">2-dehydropantoate 2-reductase</fullName>
            <ecNumber evidence="2">1.1.1.169</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Ketopantoate reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">panE</name>
        <name evidence="5" type="ORF">PPSC2_16695</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(R)-pantoate + NADP(+) = 2-dehydropantoate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:16233"/>
            <dbReference type="ChEBI" id="CHEBI:11561"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15980"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.169"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; (R)-pantothenate biosynthesis; (R)-pantoate from 3-methyl-2-oxobutanoate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the ketopantoate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.169" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372106.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04030"/>
    <dbReference type="EnsemblBacteria" id="ADO57522">
        <property type="protein sequence ID" value="ADO57522"/>
        <property type="gene ID" value="PPSC2_16695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3562"/>
    <dbReference type="eggNOG" id="COG1893">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031468_0_1_9"/>
    <dbReference type="OMA" id="NYSSMYQ"/>
    <dbReference type="OrthoDB" id="427052at2"/>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008677">
        <property type="term" value="F:2-dehydropantoate 2-reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003710">
        <property type="entry name" value="ApbA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013752">
        <property type="entry name" value="KPA_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013332">
        <property type="entry name" value="KPR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02558">
        <property type="entry name" value="ApbA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08546">
        <property type="entry name" value="ApbA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00745">
        <property type="entry name" value="apbA_panE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ApbA" evidence="3">
        <location>
            <begin position="10"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="ApbA_C" evidence="4">
        <location>
            <begin position="200"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="36008" checksum="DBA113BFB77FE3EE" modified="2011-01-11" version="1">MEARRYKVIDIIGAGSLGLLFAGRLSATGATVRLWTRTLEQAHIIAREGITVLDNEGQVVVHVTGDQLKVAPMADWQRLNSQAPARWIMFLTKQGAIGEVLEQIQPVAQTETDPGIICLQNGIGHIERIRQAWPKAVVYSAVTTEGAKKQGAASIVHAGSGVTEIGFSEEGEGEHNNQFKQCVLNRLLAAGFDVCLSKEIEKGIYRKLLINAVINPLTAVWRVRNGELLSEPVRIHMMRKLYDEGIQVYEAHGIRWESSWWDQIMDVCRATAENHSSMLADVLAQSMTEVASINGQLVQMAKRAGISAPTHEVLWQLIEGMRLKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8I7</accession>
    <name>E3E8I7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1540 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372120.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04095"/>
    <dbReference type="EnsemblBacteria" id="ADO57537">
        <property type="protein sequence ID" value="ADO57537"/>
        <property type="gene ID" value="PPSC2_16760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3576"/>
    <dbReference type="eggNOG" id="ENOG50334U7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_175500_1_0_9"/>
    <dbReference type="OMA" id="ATCCHTF"/>
    <dbReference type="OrthoDB" id="2076861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011437">
        <property type="entry name" value="DUF1540"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07561">
        <property type="entry name" value="DUF1540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1540" evidence="1">
        <location>
            <begin position="9"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8291" checksum="7BCB46948E50463C" modified="2011-01-11" version="1">MSQEAKPIVKCSVANCHYWGENNFCKADLIMIEVDGHAGKKFKEEYAGESFSSDERDKAATSAATCCHTFKPKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E900</accession>
    <name>E3E900_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Nickel ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nikA</name>
        <name evidence="9" type="ORF">PPSC2_24690</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59207.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324897.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12185"/>
    <dbReference type="EnsemblBacteria" id="ADO59207">
        <property type="protein sequence ID" value="ADO59207"/>
        <property type="gene ID" value="PPSC2_24690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5230"/>
    <dbReference type="eggNOG" id="COG0747">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017028_7_5_9"/>
    <dbReference type="OrthoDB" id="162819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015675">
        <property type="term" value="P:nickel cation transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08489">
        <property type="entry name" value="PBP2_NikA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011980">
        <property type="entry name" value="NikA_ABC_Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023765">
        <property type="entry name" value="SBP_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02294">
        <property type="entry name" value="nickel_nikA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01040">
        <property type="entry name" value="SBP_BACTERIAL_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0564">Palmitate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168261" evidence="7">
        <location>
            <begin position="29"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="8">
        <location>
            <begin position="85"/>
            <end position="452"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59207.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="545" mass="61110" checksum="9663466EF3E42200" modified="2015-05-27" version="2">MSVRHRKTATLMLVTLLLLSVILGCAKQENTPASTSTNGAANEKSITLSWPRDIGTMNPHVYNPSQLFAQSMIYEPLVSYKQGGKLEPALAESWTISKDGKTYTFKLRKGVKFSDGTLFNAAIVKKNFDAIMKNEKTHSWLGIVGVLDKTEAVDDSTFRMTLKEPYYPVLQDLSVVRPFRFLGEAGFPDDGDTSKGIKKPVGTGPWMLDEYKQDEYATFKRNPNYWGTAPKVDKITVKIIPDGETRVMAFEKGDLDLIYGEGVISLDAFKQLRDTNQYVTTLSEPVGTRSLLLNSSNPKLADLRVRLALQHGFNKQAMVEGVTSGLEETADTVLSKNYPYTNVDLQPIGYDVEKSKALLDEAGWKLPAGGTVREKDGQQMDFELIFDKTDPIQKAMAETIQAEWGELGVKVNLTGLELTVQIKRLRSNQFDLYFWYNYGAPYDPHSFINVIAKKSFGISEVLSALPMKKDLDQQVHEALSSTDETKRQELYASILKTLQEQSAIVPISYIKKTAVYQKKITNFVFPANRDENPFEGIEIGKQLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E931</accession>
    <name>E3E931_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-ketoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fabG15</name>
        <name evidence="2" type="ORF">PPSC2_24810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373771.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12305"/>
    <dbReference type="EnsemblBacteria" id="ADO59238">
        <property type="protein sequence ID" value="ADO59238"/>
        <property type="gene ID" value="PPSC2_24810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5259"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_3_9"/>
    <dbReference type="OMA" id="EAQVMAM"/>
    <dbReference type="OrthoDB" id="1601931at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="26509" checksum="CB8F865E06F8EE1A" modified="2011-01-11" version="1">MDLHQKAALVTGGGTGIGRAICMELADRKATVVVNYSRSKDDAEETVRMILEQGGSAIALQADVSQDREVRDMVEQIVQQYGTVDVLVNNASITHHIPMDDLEAVTEEVWNDLLAVNVKGMFYCARAVAPYMKHRQQGAIVNLGSIAGQTGLGSSLPYAVSKAAVHGLTKSLARSLAPDIRVNCIVPGAVATRWWAGREEQMKQLAPHLLLQRISTPEDIASMVCSALEQEAMTGQIITVDSGQTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E966</accession>
    <name>E3E966_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371925.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3382"/>
    <dbReference type="EnsemblBacteria" id="ADO57339">
        <property type="protein sequence ID" value="ADO57339"/>
        <property type="gene ID" value="PPSC2_15830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3380"/>
    <dbReference type="eggNOG" id="ENOG5034C37">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1833234_0_0_9"/>
    <dbReference type="OMA" id="QVILYHG"/>
    <dbReference type="OrthoDB" id="1902178at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="16223" checksum="9ECFA293724DC5BD" modified="2011-01-11" version="1">MRQWKGRQVILYHGNNGHTQKVRGTLEKWDDIRKCVILGPKMLAIPFENITHITMLPPGRERKSRHPARLNTFGYVMNVPLQFDNAIHFQSAVTIWRDDQLIAYNVKLVSHSADHVTLEDGQTLSKEEHLFVVRSLRGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E980</accession>
    <name>E3E980_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Polyketide beta-ketoacyl:ACP synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fabF5</name>
        <name evidence="4" type="ORF">PPSC2_15900</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371939.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03595"/>
    <dbReference type="EnsemblBacteria" id="ADO57353">
        <property type="protein sequence ID" value="ADO57353"/>
        <property type="gene ID" value="PPSC2_15900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3394"/>
    <dbReference type="eggNOG" id="COG0304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_69_2_9"/>
    <dbReference type="OMA" id="GLCTEQF"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00834">
        <property type="entry name" value="KAS_I_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="PTHR11712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_KS" evidence="3">
        <location>
            <begin position="12"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="415" mass="45169" checksum="615D200A0E74AE52" modified="2011-01-11" version="1">MRSMPNYKQPELVITGIGVTSAIGQGKTAFASALFKGQHAFGVMQRPGREGEASFIGAELPSLSYPESISKRMLRTASFSGQVAMVTLQEAWDDAKLDHVDPSRIGLVIGGSNFQQRELFQTYEAYREKMHFVPPTYGLSFMDTDLCGLCTEQFGIQGLAYTVGGASASGQVAIIQAIEAIQANRVDVCIAMGALMDISYLECQALRSLGAMGSDRYANEPAKACRPFDQMRDGFIYGESCGVIVIERSDFAMKRQGKSYAKLTGWDMGMDRNRNPNPSYEGEVQVIKRALKKAKLQPEKIDYINPHGTGSVVGDEIEIKAIQDCNLSHAYINATKSIIGHGLSAAGTVEIIATLLQMKESKLHPTRNLEKPIGVDCNWVKNEPIPAAIHNTMNLSMGFGGINTAICMQKCESGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E981</accession>
    <name>E3E981_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Poly(3-hydroxyalkanoate) depolymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">acpK</name>
        <name evidence="3" type="ORF">PPSC2_15905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371940.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03600"/>
    <dbReference type="EnsemblBacteria" id="ADO57354">
        <property type="protein sequence ID" value="ADO57354"/>
        <property type="gene ID" value="PPSC2_15905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3395"/>
    <dbReference type="eggNOG" id="COG0236">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108696_21_1_9"/>
    <dbReference type="OMA" id="MSKERIF"/>
    <dbReference type="OrthoDB" id="1943389at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="2">
        <location>
            <begin position="4"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="1">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="8909" checksum="621AF8ED7688923F" modified="2011-01-11" version="1">MRKEEVFELVKGCICEVLPELNDHQFQYDDRLVDLGADSVDRAEIVMKTMEALSLNIPRVELSGVKNIGELADALYAKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Y8</accession>
    <name>E3E9Y8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)</fullName>
            <ecNumber evidence="4">1.17.7.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ispG</name>
        <name evidence="5" type="synonym">gcpE</name>
        <name evidence="5" type="ORF">PPSC2_19510</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H(+) + H2O + oxidized [flavodoxin] = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + reduced [flavodoxin]</text>
            <dbReference type="Rhea" id="RHEA:43604"/>
            <dbReference type="Rhea" id="RHEA-COMP:10622"/>
            <dbReference type="Rhea" id="RHEA-COMP:10623"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:58483"/>
            <dbReference type="ChEBI" id="CHEBI:128753"/>
            <dbReference type="EC" id="1.17.7.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="4">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 5/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the IspG family.</text>
    </comment>
    <dbReference type="EC" id="1.17.7.3" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372694.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06710"/>
    <dbReference type="EnsemblBacteria" id="ADO58121">
        <property type="protein sequence ID" value="ADO58121"/>
        <property type="gene ID" value="PPSC2_19510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4161"/>
    <dbReference type="eggNOG" id="COG0821">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042258_0_0_9"/>
    <dbReference type="OMA" id="PTCGRTQ"/>
    <dbReference type="OrthoDB" id="665306at2"/>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00096"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046429">
        <property type="term" value="F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
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        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
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    </dbReference>
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        <property type="entry name" value="SSF56014"/>
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    </dbReference>
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    <keyword evidence="1 4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 4" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 4" id="KW-0560">Oxidoreductase</keyword>
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    <feature type="binding site" evidence="4">
        <location>
            <position position="265"/>
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        <ligand>
            <name>[4Fe-4S] cluster</name>
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        <source>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO58121.1"/>
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    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
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    </evidence>
    <sequence length="372" mass="40137" checksum="F2983AA6EAABA6DF" modified="2011-01-11" version="1">MFLRQDTRPVQVGNLTIGGSNEVIIQSMCTTKTADVEATVAEILRLEEAGCQIVRVTVNNEEAAAAIKEIKKRIHIPLVADIHFNHKLALLAIENGIDKVRINPGNIGRREKVEAVVKACKEKGIPIRIGVNAGSLEQHLLDKYGYPTPEAMVESALYHIGILEELDFHDIIVSLKASDVPMAIAAYTKAAEIIKYPLHLGITEAGTLFTGTVKSAAGMGALLAAGIGSTMRISLSADPVEEVKVARELLKTFGLITNAATLISCPTCGRLDIDLFSIANEVEDYIAKLKVPIKVSVLGCAVNGPGEAKEADIGIAGARGEGLLFRYGKMIRKVPEAEMVDELKKEIDIIVKAYEETGKIPGREERHTAEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA46</accession>
    <name>E3EA46_PAEPS</name>
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        <submittedName>
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        <name evidence="1" type="ORF">PPSC2_20490</name>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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    <keyword evidence="1" id="KW-0436">Ligase</keyword>
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        <source>
            <dbReference type="EMBL" id="ADO58338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="9580" checksum="24336D7BEFABF802" modified="2011-01-11" version="1">MLRPIIEFCTSNMHFGTDEIMAKLEQNPDYDVIEYGCLSNCGQCNAEPYAMVNGEIVSADSAELLYEVILNKIKEAEAWDNLDLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA56</accession>
    <name>E3EA56_PAEPS</name>
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    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="entry name" value="DUF2515"/>
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    </dbReference>
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            <dbReference type="EMBL" id="ADO58348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="429" mass="49531" checksum="35D875E297B8A8DC" modified="2011-01-11" version="1">MSLTEWLHVASRQLQGGLKLLGSVPRVAEEAWEGKRAAWTESRKLRYPLRDLPWDYHSAQAAMNEAEALMLVNGPATRPSSLNMPLCETDCELLERIKNDTAQENRSNITRTAAYLECYRGYPELHWALLAHLVSRNGGYNMTDLKGELIGNLFGEQEKEWLYRLLERCNALIFQDAYPQLQLYMHSRHLGRSCFHLLPHFHVSPFMKPFWERFWAWRDSSLLTVALIINEQNYIEGRVVKNPYFQKFVTHKPGFYLHDWLQLNQVIFPLGLNGGLAGLVMERFGHLDERIGFGKSLYAMLFGHQQVLDQVSAFAASVPHTGSRSDYWPGLFTPNVQKALRSPEESATLLAHEWLPPSQRLYSPELNAVWSDTAYDPIPRYDWFQDGSTLGHISEPRRPLLFAMRHEHRHGIQKTAMAHDAHNSLRSFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA64</accession>
    <name>E3EA64_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
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    </protein>
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        <name evidence="9" type="primary">yuxJ</name>
        <name evidence="9" type="ORF">PPSC2_20580</name>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07835"/>
    <dbReference type="EnsemblBacteria" id="ADO58356">
        <property type="protein sequence ID" value="ADO58356"/>
        <property type="gene ID" value="PPSC2_20580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4389"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_14_9"/>
    <dbReference type="OMA" id="FDLHAQY"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="210"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="240"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="270"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="293"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="328"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="352"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="3"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="389" mass="41796" checksum="6711216335C9A436" modified="2011-01-11" version="1">MKTALWLYLFLFIAFFDLHAQYPILTPFAISLGAAPTFIGWMMGIYSLTHLPGNLMAGPKVDKHGSRRYIMFSLTAAGLILIIQSYIHTPWELLFLRAISGYVLAFLSPACLAMLAQLSDHPVTQGKYMSGHGVVHTLASVLSPAAGAFIVASFGFSETFSSLGIILVITGLMAYFTLPKKAPAPQAQLSDGHTTPAPLSAAQTRLPFNWRYLLLPFVLACAQGILFYEIPLRNNGSASMMSTGLLFSIISLGALCTLSLLFLNKYSPMVRLLCGIILMSLSFYALATTPEAIIGIILFILGTAKGIIFPALASLFIRIGGARLGKTFALQSIATSIGSFAGPVLAGQLPDHISPFFIAFLILMTGLLFVPIQRLSPTPPLSASGPYHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA92</accession>
    <name>E3EA92_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cheR1</name>
        <name evidence="5" type="ORF">PPSC2_20710</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372953.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07955"/>
    <dbReference type="EnsemblBacteria" id="ADO58384">
        <property type="protein sequence ID" value="ADO58384"/>
        <property type="gene ID" value="PPSC2_20710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4417"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_0_9"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="7"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="431"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="531" mass="61440" checksum="44D738916B560129" modified="2011-01-11" version="1">MNSIPLGVLVVDDETRQRRGLAAMVRDLRPEYEVWEAKNGKDALNISLSQPIQIVFTDIQMPIMNGIEYLQQLRTSGQHETKVILVTVYQEFSYAQQAVRYGANDYLVKPVQSQKLIEVIQHMEKIILEEQEVLGENRTALNQIEQSMPAFVEHLFSRCVTDKLQSNEKSLLKSHFGWQGVGEVLALGASASRPEDIYMWDSKLQNTVVEILRPWASSVVFPLEVHKDHMIAVVNWRDRTEGKEAKGALQAGLKKLEQQQAISIWFAWGQPFDFDEMQISPSHERAVRLISMRFYTPHIRCLNLVASDDDQPVQELSTHEQIAFLKFVESAISNGKPDQLLEWVQHFIGRMTQGYPPPDALKAKLIHLLLVSLPRLNIGWSEEAYSRYSEQLNRAVEEATCLQNLEDRIAAWLKELILELDGSSKGEPIMKKCKEFLDTHLHEDLSLEIVARRFHYNASYFSILFKNYFGLSFTEYMVKLRMQKAQHLLLHTDAKVAEISRQVGYKDIKYFFKVFKKNVKHTPEEFRRKFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAA5</accession>
    <name>E3EAA5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Carbohydrate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glpK3</name>
        <name evidence="8" type="ORF">PPSC2_20775</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the FGGY kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372966.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08020"/>
    <dbReference type="EnsemblBacteria" id="ADO58397">
        <property type="protein sequence ID" value="ADO58397"/>
        <property type="gene ID" value="PPSC2_20775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4430"/>
    <dbReference type="eggNOG" id="COG0554">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009281_2_3_9"/>
    <dbReference type="OMA" id="TTIVWNS"/>
    <dbReference type="OrthoDB" id="233605at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004370">
        <property type="term" value="F:glycerol kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006072">
        <property type="term" value="P:glycerol-3-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000577">
        <property type="entry name" value="Carb_kinase_FGGY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018483">
        <property type="entry name" value="Carb_kinase_FGGY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005999">
        <property type="entry name" value="Glycerol_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000538">
        <property type="entry name" value="GlpK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01311">
        <property type="entry name" value="glycerol_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00933">
        <property type="entry name" value="FGGY_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00445">
        <property type="entry name" value="FGGY_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0319">Glycerol metabolism</keyword>
    <keyword evidence="5 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FGGY_N" evidence="6">
        <location>
            <begin position="6"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="7">
        <location>
            <begin position="262"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="513" mass="56091" checksum="38D9D47182236215" modified="2011-01-11" version="1">MNIETYILAIDQSTSGTKTLLVNQQGDVITRYSLEHKQYYPQPGWVEHDPLEIYHNVLIAAKGVLEKAGLSPSSLAAVTITNQRETALIWDRSTGLPIYNAIVWQCQRTAEVYTRLKNTGYEDVIRSKTGLMLDPYFSAAKFNWILEHVPHASQLLAEGKLLAGTIDSWLLWKLTGGQIHATDYSNASRTSLFNIHTLAWDMDLCSIFGVPSSILPEVKASDALYGYTQEAELWAEQVAISGIIGDSQGALYGHRCFETGDAKATYGTGTSVLMNIGSQPVQGGDGLVTTIAWGASGKITYALEAVIRTTGDSIKWTRDNLGLFSSFEEMQSMITELQDNEGVYLIPAFVGLGAPYWNPSARAAIVGMTRGNGKAHIVRAALESIGYQVRDAVEFIREQSGVPLTSLRTDGGASSNSWLMQFQADILGTHVTRSTCAELSAMGSVYLGGLGVGYWSDSKSIVTGNTSDQNLYEHYTPSMDEVRRQRLYTGWQNAVQMVIRSDQPLTSSSSANC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAH4</accession>
    <name>E3EAH4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_21770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373159.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08905"/>
    <dbReference type="EnsemblBacteria" id="ADO58592">
        <property type="protein sequence ID" value="ADO58592"/>
        <property type="gene ID" value="PPSC2_21770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4632"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OMA" id="SEMEMYA"/>
    <dbReference type="OrthoDB" id="170593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="468" mass="55062" checksum="3A255881F8F9AFFC" modified="2011-01-11" version="1">MEKNTTIRAQIEKYIQSEGISMQCFADASKVNPGTLSGILNRNPPRPISVNQLDLITEAMGLEEGSLFEMYVDECFIHSLPHWRRLRPFLLRCSELNKLDCIRSVLGYLMDDLSNIPAIFETAEAMFEDGRHEASMLLYDCVIESEKYTHSERLAISYFRIFQIQIKDNQRNLKAAVQFHLYRSRLPEIYALEGLHMLSQVFALKMQWSEMEMYADELRELAQALYRNRNRFGDEHLELLKPLVYYYAQGHLLKASCYEFQGRYEESKQWIEGYADLSWFEGLDEEGWKVVNLHRVYAQGNRLCIEIKMGNTSAIYEYITYLREHPDETLEGLNTLLESANRFGYFVDAELELFSQQLKSFWELAPEQWDTHYRKHFNAFRFASFCKVYAEYYFRKGDYPEGLEQTLHCLQLSVDNSYTEHIIGCMALFEQHRNFATPRQQQLYQSFCLGVRANEKNHAYDHSTGGYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAI7</accession>
    <name>E3EAI7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 9">Serine acetyltransferase</fullName>
            <ecNumber evidence="4 9">2.3.1.30</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cysE</name>
        <name evidence="11" type="ORF">PPSC2_22540</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>acetyl-CoA + L-serine = CoA + O-acetyl-L-serine</text>
            <dbReference type="Rhea" id="RHEA:24560"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:58340"/>
            <dbReference type="EC" id="2.3.1.30"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-cysteine biosynthesis; L-cysteine from L-serine: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.30" evidence="4 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373284.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10005"/>
    <dbReference type="EnsemblBacteria" id="ADO58745">
        <property type="protein sequence ID" value="ADO58745"/>
        <property type="gene ID" value="PPSC2_22540"/>
    </dbReference>
    <dbReference type="GeneID" id="66575558"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4778"/>
    <dbReference type="eggNOG" id="COG1045">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051638_10_0_9"/>
    <dbReference type="OMA" id="GDDVMLY"/>
    <dbReference type="OrthoDB" id="1639008at2"/>
    <dbReference type="UniPathway" id="UPA00136">
        <property type="reaction ID" value="UER00199"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009001">
        <property type="term" value="F:serine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03354">
        <property type="entry name" value="LbH_SAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045304">
        <property type="entry name" value="LbH_SAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042122">
        <property type="entry name" value="Ser_AcTrfase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005881">
        <property type="entry name" value="Ser_O-AcTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000441">
        <property type="entry name" value="CysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01172">
        <property type="entry name" value="cysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0198">Cysteine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9 11" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="207"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00018522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR000441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="226" mass="25009" checksum="9885EC8E0726DED1" modified="2011-01-11" version="1">MFRHFKSDIQTVLDNDPAARSKLEVIFTYSGVHALWAHRIAHWFYLRKWCTLARVISQVSRFMTGIEIHPGARIGDRLFIDHGMGVVIGETCEIGDDVVLYQGVTLGGTGKEKGKRHPTIGNNVVIGSGAKILGSFTIGAQSNIGSNSVVLKEVPPNSTVVGIPGRVVRQDGRRPDRLSHQLPDPVVDSIRSLQMEIERLRAELSDLKEEQSAQKHQVTQENKLQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAP8</accession>
    <name>E3EAP8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_22840</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373345.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10315"/>
    <dbReference type="EnsemblBacteria" id="ADO58806">
        <property type="protein sequence ID" value="ADO58806"/>
        <property type="gene ID" value="PPSC2_22840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4837"/>
    <dbReference type="eggNOG" id="COG4942">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029425_4_3_9"/>
    <dbReference type="OMA" id="VHAGWFK"/>
    <dbReference type="OrthoDB" id="1891666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169002" evidence="3">
        <location>
            <begin position="26"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M23" evidence="4">
        <location>
            <begin position="327"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="400"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="28"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="189"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="46760" checksum="1189A22423A15F99" modified="2011-01-11" version="1">MKKIGSVLAATLVAALLIQPSDGYAKSVSEINSQLNQLEKQAKSAKQQQQKAAQDKQYAQHYKNKTVQNLKTVLAQINSVSDQLTRVAVQIDQTEDNLRATKKDLAEAIDRINSREKMLETRVRLMYTDGTVSYMDVLMSSTSFSDFLSRVDSLKTIVEQDQILLDEHKKDKALVVSKKKQLDTEYKNAKKLYALKQDAKAQLNSKEKEKQRLIANYDHDIAESDEISEEQNDMLVALANKRVALVQEKNKLRAEQAAKAARARAAARAAAAKRYASSSSGAASNSSHTAASTYTGGSGTLATPVAHYRLSSTFGMRVHPITGKLKGHTGIDLAAPQGTDIHAAEDGVVIVAEWWSGYGNTVVIDHGDGLWTLYGHIRNGGTVVHTGQTVKRGQKIAEVGSTGNSTGPHCHFEVRENNKPVNPMNYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAV4</accession>
    <name>E3EAV4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase</fullName>
            <ecNumber evidence="10">2.1.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Cobalamin-independent methionine synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Methionine synthase, vitamin-B12 independent isozyme</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">metE</name>
        <name evidence="13" type="ORF">PPSC2_23835</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:21196"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58140"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
            <dbReference type="ChEBI" id="CHEBI:58207"/>
            <dbReference type="EC" id="2.1.1.14"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-methionine from L-homocysteine (MetE route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the vitamin-B12 independent methionine synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.14" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373554.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11340"/>
    <dbReference type="EnsemblBacteria" id="ADO59018">
        <property type="protein sequence ID" value="ADO59018"/>
        <property type="gene ID" value="PPSC2_23835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5043"/>
    <dbReference type="eggNOG" id="COG0620">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013175_0_0_9"/>
    <dbReference type="OMA" id="KVMKGML"/>
    <dbReference type="OrthoDB" id="577156at2"/>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00082"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003871">
        <property type="term" value="F:5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03311">
        <property type="entry name" value="CIMS_C_terminal_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.210">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00172">
        <property type="entry name" value="Meth_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013215">
        <property type="entry name" value="Cbl-indep_Met_Synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006276">
        <property type="entry name" value="Cobalamin-indep_Met_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002629">
        <property type="entry name" value="Met_Synth_C/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038071">
        <property type="entry name" value="UROD/MetE-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08267">
        <property type="entry name" value="Meth_synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01717">
        <property type="entry name" value="Meth_synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000382">
        <property type="entry name" value="MeTrfase_B12_ind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51726">
        <property type="entry name" value="SSF51726"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01371">
        <property type="entry name" value="met_syn_B12ind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 10" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="4 10 13" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 10 13" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Meth_synt_1" evidence="12">
        <location>
            <begin position="14"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="Meth_synt_2" evidence="11">
        <location>
            <begin position="440"/>
            <end position="762"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-methyltetrahydropteroyltri-L-glutamate binding" evidence="10">
        <location>
            <begin position="26"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="L-homocysteine binding" evidence="10">
        <location>
            <begin position="445"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="region of interest" description="L-methionine binding" evidence="10">
        <location>
            <begin position="445"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-methyltetrahydropteroyltri-L-glutamate binding" evidence="10">
        <location>
            <begin position="529"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10">
        <location>
            <position position="708"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>5-methyltetrahydropteroyltri-L-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:58207"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="498"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="575"/>
        </location>
        <ligand>
            <name>5-methyltetrahydropteroyltri-L-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:58207"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="613"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="619"/>
        </location>
        <ligand>
            <name>5-methyltetrahydropteroyltri-L-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:58207"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="655"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="657"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="679"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="740"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO59018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="772" mass="86431" checksum="578DA7F4BA56ECA1" modified="2011-01-11" version="1">MSINERSALSGLISSNLGYPRIGGNREWKKALERFWQGSIDESELHSEMKRLRLEHLSKQRDKGIDRIPVGDFSYYDHVLDTSVMFGLVPERFNYRFTGPVPLSVYFGIARGQKGATASEMTKWMNTNYHYIVPELANAAPVLTENKPLLAYREAKQELGIEGKPVLIGPYSFVVLSKGYDRKDLASIIRTFQPLYARVLSELAAEGVQWVQIDEPVLTTSFPAEDLEIIQEVYEALTQAAPSLNIMLQTYFGSLDHYERLTELPVQGLGLDFVYDDGENLQHICQHGFPKGKTLGAGVIDGRNIWRSDLNAVAALLVQLAEQTTAPQLVVQPSCSLLHVPVSLEAEHKLDRELVHALAFADEKLDEIAVLTAALGKHDPSALAKLEQSSDAVARFNRSTARVQTAADLADLLTKEPLSRSVPFAERRVIQQNRLKLPPLPTTTIGSFPQTAEVRKARLHYRKGEWSAEQYRTFIQQQIKEWIDIQEDIGIDVLVHGEFERTDMVEFFGEKLKGFAFTQNGWVQSYGSRCVKPPIIYGDVSFDQPMTVEETAFAQSLTSKPVKGMLTGPVTILNWSFERNDIPRRQVALQLALALRAEVEALEQAGISMIQVDEPAIREGLPLKKEQQQAYLDWAVQAFLVTTATAQPATQIHTHMCYSEFQDMIQSISDMDADVISIETSRSHGELIVSFEDQVYDKGIGLGVYDIHSPRIPDVSEMLSMIQRALRVLPSDLFWVNPDCGLKTRTKEESVAALRQMVQAAQAARAVLSVSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAV9</accession>
    <name>E3EAV9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-ketoacyl-ACP reductase</fullName>
            <ecNumber evidence="2">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fabG13</name>
        <name evidence="2" type="ORF">PPSC2_23860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.100" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373559.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11365"/>
    <dbReference type="EnsemblBacteria" id="ADO59023">
        <property type="protein sequence ID" value="ADO59023"/>
        <property type="gene ID" value="PPSC2_23860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5048"/>
    <dbReference type="eggNOG" id="COG4221">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_2_10_9"/>
    <dbReference type="OMA" id="HEHQPRV"/>
    <dbReference type="OrthoDB" id="1261526at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="25241" checksum="73816C796519B899" modified="2011-01-11" version="1">MELKNKTAIITGASKGIGKAIAETLAKEGVNLGLISRTLTDLQKLQDSLGSTYGVKVVSAVADISDRTQAAAAVASLEHELGAVDILINNAGIATFGTVADMDPEEWERIIRVNLMGTYYVTHAALPSMLAQQSGNIINISSTAGERGFATGSAYCASKFALMGFTEALMQEVRKSNIRVTALTPSTVNTELAVNAGLPIGDEDRMLQPQDLADLTLAALKLPPRVQLKVAGIWTTNPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAW6</accession>
    <name>E3EAW6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Adenine deaminase</fullName>
            <shortName evidence="5">Adenase</shortName>
            <shortName evidence="5">Adenine aminase</shortName>
            <ecNumber evidence="3 5">3.5.4.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ade</name>
        <name evidence="8" type="synonym">adeC3</name>
        <name evidence="8" type="ORF">PPSC2_23885</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>adenine + H(+) + H2O = hypoxanthine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:23688"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.2" evidence="3 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373566.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11390"/>
    <dbReference type="EnsemblBacteria" id="ADO59030">
        <property type="protein sequence ID" value="ADO59030"/>
        <property type="gene ID" value="PPSC2_23885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5054"/>
    <dbReference type="eggNOG" id="COG1001">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027935_0_0_9"/>
    <dbReference type="OMA" id="MVTACAY"/>
    <dbReference type="OrthoDB" id="751534at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000034">
        <property type="term" value="F:adenine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006146">
        <property type="term" value="P:adenine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01518">
        <property type="entry name" value="Adenine_deamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006679">
        <property type="entry name" value="Adenine_deam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026912">
        <property type="entry name" value="Adenine_deam_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11113:SF2">
        <property type="entry name" value="PTHR11113:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13382">
        <property type="entry name" value="Adenine_deam_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="6">
        <location>
            <begin position="55"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="domain" description="Adenine_deam_C" evidence="7">
        <location>
            <begin position="396"/>
            <end position="559"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="575" mass="63909" checksum="75F5242F3F50F714" modified="2011-01-11" version="1">MRADKMILQVKVYNSYYKTFEVGNVAILEGKFMYIGQRGLESFEAAEIVEGHGKYMIPGLIDIHLHIESTMVTPATFSYGLIRNGVTTIVPEPHEMANVFGLEGIQEMMEASKDCVADMFYGIPSSVPATPLETSGGEIDIPEIDTLLQTGEMICLGEIMNYVDVIRDPESKTNRILRHVREHYPELIIEGHTPQLLDLDLHQLIYAGIGSDHTHQSIEGMKARMAAGMFIEIQEKSMTPEVMDYLIQEDVAQHFCFVTDDVMPDSFVERGHLNHIVSKAIGMGMKPEDAIYAATFTPAARMRMHDRGTIAPGKIADFVLLSDLEQFDVEQVYKDGHKVFDKFEEYHQTQVKCQFPAHFYQSVKLNPLTEQDFTVKLDVADGTHQCRIMMVKDGSTFTSERIAPAQVEQGELVWEHGEHGLIATFERYGKNGKRAYGLIGGDTIKRGAVATTYSHDNHNLLVVGHNKQDMILAANTVLSSQGGFCVVENGKVLSHLPLTVGGILTEGPLEMVAAHVKELRSALLSLGYRHYNPIMSLSTHSLPVSPALKITDHGLIDVNVGKVVPLIINPSEMQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB87</accession>
    <name>E3EB87_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">rRNA methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoU</name>
        <name evidence="2" type="ORF">PPSC2_20875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372988.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08105"/>
    <dbReference type="EnsemblBacteria" id="ADO58419">
        <property type="protein sequence ID" value="ADO58419"/>
        <property type="gene ID" value="PPSC2_20875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4453"/>
    <dbReference type="eggNOG" id="COG0566">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021322_3_2_9"/>
    <dbReference type="OMA" id="FLAEGPQ"/>
    <dbReference type="OrthoDB" id="1697536at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001537">
        <property type="entry name" value="SpoU_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013123">
        <property type="entry name" value="SpoU_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00588">
        <property type="entry name" value="SpoU_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08032">
        <property type="entry name" value="SpoU_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00967">
        <property type="entry name" value="SpoU_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SpoU_sub_bind" evidence="1">
        <location>
            <begin position="30"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="28179" checksum="68CACDC6F870E848" modified="2011-01-11" version="1">MEIISPNNARVKEWSQLLEKKHRTRQHKYIVEGIHLVQEALRSNAAVESVAYDLDKGIPAELNGLDSADQPVEWIPVSAAVIAKCTDTKTPQSVFAIVRKEERSAFAALLEQPDALVMVLDGVQDPGNVGTIIRSADAAGAAGVILGHGCADLYNPKTIRSTMGSLFHLPVIEGSLEELLPQAKSKGARLLSTSLDASLSCYTIDLRVSTWLVIGNEGQGISAATASMVDESVFIPMQGQAESLNAAMASTVLLFEAMRQRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBI2</accession>
    <name>E3EBI2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pmxD</name>
        <name evidence="10" type="ORF">PPSC2_22065</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373222.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EBI2"/>
    <dbReference type="STRING" id="886882.PPSC2_c4711"/>
    <dbReference type="EnsemblBacteria" id="ADO58656">
        <property type="protein sequence ID" value="ADO58656"/>
        <property type="gene ID" value="PPSC2_22065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4696"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="EYERTDA"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="28"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="30"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="344"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="377"/>
            <end position="384"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="577" mass="64453" checksum="CA9C57F298A49098" modified="2011-01-11" version="1">MKKGGWLSQVKELGYLLMFMNRKRKTQYAIGLAVTALTQTLFLIAFSLVVHNLVDFAVSRDTSLMVEAFIILGAALFLENVISPWFIYLYQRSVELTVLNIRERLYDKLCRVRPRFLEQTHHGDLLSRVNNDVTTVEFTFSQVYFVLLLQVVFCIGSIVSMVLIDWRFAGVSCVILLLSSVVSLKFARDIRALSEQGLQTLGKMTEKFKDFMGGIQIVKLFRIRTIYGQYEALNEQMTQTLRQTAQKNGMQAAVNHFISYVTFCGIIVIGSLLYAYGLMGMGSVAALAVLQVNLTHALLNLGMVLSMTQNSLAGAHRIQEVLREEEEPDRLGSPHSELVSEAAVEFRDVEFSYQADKKVLVDISMQVFPGQVAAIVGASGSGKSTLIKLLLGFYPVDSGEILLQGKPFGHYTLDEIRRQIAYVPQEPFLFTGTIEENIRYGNPDATDEEVIEAAKAAYAHHFIQELPEQYKTPVGERGASLSGGQRQRIAIARAILKNAPILLLDEATSALDNESQHWVQQALNVLMKGRTTILIAHRLSTVEHADLITVMNQGTVVERGRHQDLLALGGYYARLYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC84</accession>
    <name>E3EC84_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yxaM</name>
        <name evidence="9" type="ORF">PPSC2_01210</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368870.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0240"/>
    <dbReference type="EnsemblBacteria" id="ADO54227">
        <property type="protein sequence ID" value="ADO54227"/>
        <property type="gene ID" value="PPSC2_01210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.232"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_684563_0_0_9"/>
    <dbReference type="OMA" id="VELFWGF"/>
    <dbReference type="OrthoDB" id="1345431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="129"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="153"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="209"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="243"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="283"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="329"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="359"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="1"/>
            <end position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="401" mass="44897" checksum="F5474AC98783A355" modified="2011-01-11" version="1">MNIFSILSALRGLAIGFFSPIWIIHLNDQGFDLLAIGILGTVFEVARLLFEIPTGTFADNNGVRRSIMLSYIFSMATWLIFPFIGITWVCVIAMIIWALAEALISGAFETWMSQVTPKEEFSKRLMRNAQVLIASIILTSLLSGHIYKFNSMLPFIFVALIYAIMLAIILIYLKSDQQIIKNQKKNTPKESFIEITGKSFQIVFKHRRILNVVLAGFFAALSYDVIMRYWQPYLIQIGNSKEFLGYVMAIAGVLAFILLHFTAKAHKIIEKNTLLSLIMVESISILMIFSTAFGLKAIGLVAISFLLSVEDIRNPIVNGYLNKFFPDSYKATLFSVNSVTGAAGEILSGIIFGLIAVKFGIIATFIVAAIFLIPSILLYYNTAQNTDINYSEKRDNMTFKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECD7</accession>
    <name>E3ECD7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lysR7</name>
        <name evidence="3" type="ORF">PPSC2_01465</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368922.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0295"/>
    <dbReference type="EnsemblBacteria" id="ADO54280">
        <property type="protein sequence ID" value="ADO54280"/>
        <property type="gene ID" value="PPSC2_01465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.290"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="HPRHEHA"/>
    <dbReference type="OrthoDB" id="1439189at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="33710" checksum="DB49DAEADC189C6A" modified="2011-01-11" version="1">MNIQQLKCFVSLAETLNFSTTANKLNLTQPAVSHNIKSLENELGIVLVVRNKRTVNLTVAGNSFYEDIEGLLFRLDQSIKKAKRLSEKYDSTLIIGYTETVFEKKVLPDIIKRFKEKYPQIQIQLKKSNLTREKDDLLNQKFDIIFTTEDNLGKDIDFCFYPVLKGSYVCVLPQNHPLANERELTFEQLNHKSIILFNEHQSPPTLKSMHRKIIENCPESSFTYGDTINTIHTMIKSDLGVSVLPNFVVVEDNEISFVPLSYTEEVIYGVACLRGEERLEVKRWISTLKELLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECI1</accession>
    <name>E3ECI1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yisR3</name>
        <name evidence="3" type="ORF">PPSC2_01665</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368966.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14435"/>
    <dbReference type="EnsemblBacteria" id="ADO54324">
        <property type="protein sequence ID" value="ADO54324"/>
        <property type="gene ID" value="PPSC2_01665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.333"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="GKCVYWV"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="159"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="30716" checksum="C96E6C409F507B16" modified="2011-01-11" version="1">MITLMDIRQDNGVDWYEKAGTNSSHDDLLFILVTFGKCVYWVNDCKFILGKGEALLLPAHLNYYGKSIPTLFHTKYVIHCRKTCTNSTLPILNTNKPLLIKPGCYDMLHERIKSMYYQWTEHPSYYTLMADCLLTEAMIYVNQEWDKGAISCDKERHVEHMKQYIQNHYREKVTKEELGDAIRKTPNYAATLLREVTRQTISEHVHTQRIKTAIYMLTESRLTIREISEYVGYSDVSYFHRIFKRLTGCSPSEFLDERSSIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECJ7</accession>
    <name>E3ECJ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="15">PTS sugar transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">scrA3</name>
        <name evidence="15" type="ORF">PPSC2_03915</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369405.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0786"/>
    <dbReference type="EnsemblBacteria" id="ADO54769">
        <property type="protein sequence ID" value="ADO54769"/>
        <property type="gene ID" value="PPSC2_03915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.777"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_2_0_9"/>
    <dbReference type="OMA" id="TTGFNYI"/>
    <dbReference type="OrthoDB" id="196185at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036878">
        <property type="entry name" value="Glu_permease_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018113">
        <property type="entry name" value="PTrfase_EIIB_Cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001996">
        <property type="entry name" value="PTS_IIB_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00367">
        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55604">
        <property type="entry name" value="SSF55604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00826">
        <property type="entry name" value="EIIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51098">
        <property type="entry name" value="PTS_EIIB_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01035">
        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 15" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="159"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="191"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="221"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="264"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="344"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="378"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="402"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="447"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="13">
        <location>
            <begin position="9"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="14">
        <location>
            <begin position="112"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO54769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="479" mass="51408" checksum="88CACC623434A5E9" modified="2011-01-11" version="1">MEAKEKQYKHISQEILKYIGGEENIIGVAHCATRLRIVLEDNEKAELKKIEEVDLVKGVFIAGDQLQIIFGAGLVNNIYAVFSKLTGTEDMSLSDVKSKSAQKQNPFQKAIKSLSDVFIEIMPGILAAALLMGITGLLGQKGLFGPKSIVEMYPIFQGINRFVQIVSTGIFTILPLLVVYSATKRYGGRPILGLVLGAIMLHPALADAFEVAKGSQNPESISLFGLPVQLVGFQGGIIIALMMGYVVAKLDQFFNKKVPDMIKLFLAPLLTVFVSSLLLFTIIGPLGRELASLVTVSLLWMTQNLGIFGFMFFAGIQQIIVITGLHHVMGAVEAQLLTDTGRNFINPLASVALMAQGGAVLGYILLNRKDTKVKELGYSAFGSVLFGISEPAIFGVTLKYKFPLVAGCLGGMVAGAYVYLSKLTAIGFGTTALPGFAIAASDNHGHINYLGAHLIALICGALFTLAYGVIKSKRSKAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECN4</accession>
    <name>E3ECN4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lytR1</name>
        <name evidence="5" type="ORF">PPSC2_04080</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LytR/CpsA/Psr (LCP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369441.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16880"/>
    <dbReference type="EnsemblBacteria" id="ADO54806">
        <property type="protein sequence ID" value="ADO54806"/>
        <property type="gene ID" value="PPSC2_04080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.813"/>
    <dbReference type="eggNOG" id="COG1316">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016455_1_0_9"/>
    <dbReference type="OMA" id="THGPNTA"/>
    <dbReference type="OrthoDB" id="491753at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004474">
        <property type="entry name" value="LytR_CpsA_psr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03816">
        <property type="entry name" value="LytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00350">
        <property type="entry name" value="lytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="LytR_cpsA_psr" evidence="4">
        <location>
            <begin position="89"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="317"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="373" mass="41454" checksum="F38BF0F1D398A118" modified="2011-01-11" version="1">MTSRTKRTIWSVLAVVIVAIVGFAVYYFTSIYNQLDNLHKEGANSPFKNVKQVDQVRTPEPPKWEGTDMVNILLMGVDGRGIQKGEVPRSDSMMVVSLDPVKKKIHLFSILRDTYVDIPGYGKNRINTAITHGPNTAMKTAGDLLGIPVQYYVYTDFQGFIKLVDAVGGIDFEVEKDMHYTSNADKHEYDIDLKKGMQHLDGNTALQYVRFRHDAMSDFSRSGRQRAFLEAVAQKMQTTTSIANLPSILEQVNPYIDTNLSVNDMWKLANVGYQSSFAGSEQVPPMKLLGEENVGGAAVLTVRDPEELKSYVQDIFNNPPTQTQEQNKDQNETKQPDSASSSKTDKASFTGGSKTSNEDASTQSTTKTGQKEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECZ7</accession>
    <name>E3ECZ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Arabinose transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araQ3</name>
        <name evidence="7" type="ORF">PPSC2_04365</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369500.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17175"/>
    <dbReference type="EnsemblBacteria" id="ADO54866">
        <property type="protein sequence ID" value="ADO54866"/>
        <property type="gene ID" value="PPSC2_04365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.870"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_1_9"/>
    <dbReference type="OMA" id="NGMWFAV"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="143"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="245"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="75"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="31557" checksum="B8CCE9EC8D2FFFF8" modified="2011-01-11" version="1">MAQKQKGPLSAFLVVLFILFAGFALFPLFAVTLASFKPSTELLRYGLNLKLEWAIMSLKNYAFIFQGTTDYFQWYWNSLVITVLFTVLCLILSAMVGYGLEMYRFRLKNVIFTLVLVVMMIPVEIIMLPLYKLMIGMKLINTVWGVILPFVVAPIPIFFFRQYLSGVPKDFMDAARVDGCSEYGIFVRIMMPLMAPAFAAMAILQAMNSWNNFLWPMIVLRTNDMLTLPIGLSSLLTPYGNNYDVLIAGSVLAILPILVVFLFFQRYFIEGMTAGGVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED13</accession>
    <name>E3ED13_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inorganic phosphate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pit</name>
        <name evidence="7" type="ORF">PPSC2_04435</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369516.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17265"/>
    <dbReference type="EnsemblBacteria" id="ADO54882">
        <property type="protein sequence ID" value="ADO54882"/>
        <property type="gene ID" value="PPSC2_04435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.886"/>
    <dbReference type="eggNOG" id="COG0306">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015355_1_1_9"/>
    <dbReference type="OMA" id="GYDITRT"/>
    <dbReference type="OrthoDB" id="1329125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001204">
        <property type="entry name" value="Phos_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11101">
        <property type="entry name" value="PTHR11101"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01384">
        <property type="entry name" value="PHO4"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="107"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="135"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="302"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="34907" checksum="B2A5D24DD946734B" modified="2011-01-11" version="1">MDTSLLVLGIVIFLALAFDFINGFHDTANAIATSVSTRALTPRRAIIMAAVMNFLGAILFTGVAKTIGGSVADPTKLTNGIDIVIATLIAAIIWNLLTWWFGIPSSSSHALIGALAGAVYVGAGQDKLNWSGFIGIVEGLIFSPLIAFVVGYIVMMILKYIFAYRSPHTVNKGFRTMQVITAAIQSFTHGTNDAQKAMGIITFALVSAGYQDHLEVPMWVKISAATAMALGTSIGGWKIIKTMGTKIFKIEPINGFAADVSGASVIFTATMLHLPVSTTHAITSAILGVGSAKRFSAVRWSLAGRIVITWVITIPISALLSGLIFKILF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED62</accession>
    <name>E3ED62_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">araC1</name>
        <name evidence="3" type="ORF">PPSC2_02250</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369059.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0435"/>
    <dbReference type="EnsemblBacteria" id="ADO54419">
        <property type="protein sequence ID" value="ADO54419"/>
        <property type="gene ID" value="PPSC2_02250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.427"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="GKTQFQF"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="187"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="33748" checksum="103DD8A188670C8E" modified="2011-01-11" version="1">MTTNQKNAQYVWSEDPVAIICTPSAFAKKSLFYIQEIGYFKTDAYVMERQKLTSFLLLFTLSGRGELQYRGKDYILKPHDMLFINCEEYVQYKTSCQKTWEFISVNLYGNLIDHFYEQFDKHNKPVISLQDSSAVLDKLRTLLHVQPERSLSSELLSSRIIVDLLTIILQHPYTNPNANSDGTAEVRKVKQYLDQSYCERITLDSLAEMFGLNKFNLAKNFKKQIGFSPIEYLINVRITAAQSWLKTSDVAIVDIAQYVGIPNTSHFINLFKEHIGETPHSYRKKWGNRIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE7</accession>
    <name>E3EDE7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Phosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ppe1</name>
        <name evidence="5" type="ORF">PPSC2_04625</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369559.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17520"/>
    <dbReference type="EnsemblBacteria" id="ADO54926">
        <property type="protein sequence ID" value="ADO54926"/>
        <property type="gene ID" value="PPSC2_04625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.929"/>
    <dbReference type="eggNOG" id="COG1409">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_465333_0_0_9"/>
    <dbReference type="OMA" id="HQSAYSE"/>
    <dbReference type="OrthoDB" id="1242748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003993">
        <property type="term" value="F:acid phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008963">
        <property type="entry name" value="Purple_acid_Pase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015914">
        <property type="entry name" value="Purple_acid_Pase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16656">
        <property type="entry name" value="Pur_ac_phosph_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49363">
        <property type="entry name" value="SSF49363"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169118" evidence="2">
        <location>
            <begin position="33"/>
            <end position="478"/>
        </location>
    </feature>
    <feature type="domain" description="Pur_ac_phosph_N" evidence="4">
        <location>
            <begin position="44"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Metallophos" evidence="3">
        <location>
            <begin position="165"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="478" mass="52879" checksum="3A0EF4FFF85038F6" modified="2011-01-11" version="1">MFKKFQKWSATSMSVALALGLITGLSALPVHAESPVNTDQGISKVTATFYGDTKASKGFTWYTSKLFTKSTVQVTKKTASEADFTNALTFEGTSSPSTNSPEELVHKAVATGLQADTAYYYRVGDAARGIWSETGTFQTAPKNGEFTFIDLADTQAKSEDEAILSSQTLEKALQTVNNAQFVVHNGDIVDTGTKEEQWNWLLGHSQKSLLNTTIVPSAGNHEDENYAFYDHFNINQPAGSATKTGAYYSFDYSNAHFIVLNSNEDSEKYANFSEDQVEWLKKDAAAAKKAGAKWIIVNIHKGPYTTSNHATDADIMDNNGVRNQIAPLMDKLDIDFVVQGHDHIYARTKPINQEGKATTPTKLKDRLNEKTIEYSVNPDGSIYVIPATAGPKVYYKNPSEKLGDKYYNLFELAEENHAAVYGPDPSDNRRPVRGQVQNFVGITVDENKLTAVTYEIDQNKNDAKPFIVDQFGIIKKYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDM4</accession>
    <name>E3EDM4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Flp1_like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_06510</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369963.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19475"/>
    <dbReference type="EnsemblBacteria" id="ADO55332">
        <property type="protein sequence ID" value="ADO55332"/>
        <property type="gene ID" value="PPSC2_06510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1341"/>
    <dbReference type="eggNOG" id="ENOG5033HC5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_189990_4_1_9"/>
    <dbReference type="OMA" id="VVEMIMI"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031564">
        <property type="entry name" value="Flp1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16982">
        <property type="entry name" value="Flp1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="Flp1_like" evidence="2">
        <location>
            <begin position="13"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7117" checksum="7B2B1D5A0EF857B2" modified="2011-01-11" version="1">MMMTIVAGSIRKLHKDEDGLGTLEMILIIAILIAVAIIFKDQIKKIVEGLLKKADKKSNDFMDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDR2</accession>
    <name>E3EDR2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Probable queuosine precursor transporter</fullName>
            <shortName evidence="1">Q precursor transporter</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypdP</name>
        <name evidence="2" type="ORF">PPSC2_06695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the import of queuosine (Q) precursors, required for Q precursor salvage.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370001.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19660"/>
    <dbReference type="EnsemblBacteria" id="ADO55370">
        <property type="protein sequence ID" value="ADO55370"/>
        <property type="gene ID" value="PPSC2_06695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1378"/>
    <dbReference type="eggNOG" id="COG1738">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075503_2_1_9"/>
    <dbReference type="OMA" id="IFQKFFY"/>
    <dbReference type="OrthoDB" id="1462872at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990397">
        <property type="term" value="P:queuosine salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02088">
        <property type="entry name" value="Q_prec_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003744">
        <property type="entry name" value="YhhQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34300">
        <property type="entry name" value="PTHR34300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02592">
        <property type="entry name" value="Vut_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00697">
        <property type="entry name" value="TIGR00697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="195"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="26478" checksum="98ACAF0A3A3F552E" modified="2011-01-11" version="1">MFNLLWGAAFVLVNFMFFLLCYRLFGKKGLYAWIGVATVLANIQVTKTIDLLGITTTLGNTMYVSMYMASDLLNEKYGPKEAQKAVWFGFFTLIMTTITMQMVLLFEPTATDFAQTPMQQLFGLLPRLALASLTAYAVSQLLDVRLYAWIRKFFPERHQLWIRGNGSTMISSFIDTLIFCSIAFYGYAWGIWIELLFTTYILKFVLTAAGTPILYIARNFCLIEEEGQTLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS0</accession>
    <name>E3EDS0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HAD family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370009.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19695"/>
    <dbReference type="EnsemblBacteria" id="ADO55378">
        <property type="protein sequence ID" value="ADO55378"/>
        <property type="gene ID" value="PPSC2_06730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1385"/>
    <dbReference type="eggNOG" id="COG1011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_8_1_9"/>
    <dbReference type="OMA" id="FEAILCA"/>
    <dbReference type="OrthoDB" id="1204073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="27518" checksum="3AFF5469BF29840A" modified="2011-01-11" version="1">MNLQKKAVFFDVDDTMYDHLHPTRDALRTVLGLSERFPYEEVYHRIRYYSDLLSAKGGLLEGKAGQDELDDMREGRFILALQEFGVDITREQAVHVQQEYLDRQYRIESFEGATSLIDELSSAGYLVGLITNGLEEHQMSKIKAMTLENHVAAEHIFVSGTVGYAKPDPRIFEIVNERTGTLAEHCCYIGDSWRNDVAGAIAANWRVIWFNHRNAIPESDVSGAYETAASYAGLRKLLLPDAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDU3</accession>
    <name>E3EDU3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stage 0 sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yaaT</name>
        <name evidence="2" type="ORF">PPSC2_00105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368662.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13120"/>
    <dbReference type="EnsemblBacteria" id="ADO54009">
        <property type="protein sequence ID" value="ADO54009"/>
        <property type="gene ID" value="PPSC2_00105"/>
    </dbReference>
    <dbReference type="GeneID" id="66574943"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.20"/>
    <dbReference type="eggNOG" id="COG1774">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033149_2_0_9"/>
    <dbReference type="OMA" id="YGGLGPC"/>
    <dbReference type="OrthoDB" id="1523756at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007557">
        <property type="entry name" value="PSP1_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04468">
        <property type="entry name" value="PSP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51411">
        <property type="entry name" value="PSP1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PSP1 C-terminal" evidence="1">
        <location>
            <begin position="61"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="29796" checksum="8406BBA40A1CA264" modified="2011-01-11" version="1">MYSVVGVRFKKAGKTYYFDPLDLPVEKENCVIVETARGIEYGKVVVGKKEVNDSDVVLPLKKVIRIAGDDDALVVEENKLAAKDAFGTCLNKIKDHNLKMKLVDVEFTFDRNKIIFYFTAEGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMLGGIGPCGRILCCSSWLGDFDPVSIKMAKDQSLSLNPTKISGLCGRLMCCLKFEHDNYESMREELPQVGKMVITSLGEGKVVGVNAGHRTVHVQLFEISKVKELPMDDVVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE17</accession>
    <name>E3EE17_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DglA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dglA</name>
        <name evidence="4" type="ORF">PPSC2_02710</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0045 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369137.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15475"/>
    <dbReference type="EnsemblBacteria" id="ADO54497">
        <property type="protein sequence ID" value="ADO54497"/>
        <property type="gene ID" value="PPSC2_02710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.506"/>
    <dbReference type="eggNOG" id="COG0011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137479_3_1_9"/>
    <dbReference type="OMA" id="AYGTNIE"/>
    <dbReference type="OrthoDB" id="2054097at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.930">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029756">
        <property type="entry name" value="MTH1187/YkoF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002767">
        <property type="entry name" value="Thiamine_BP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01910">
        <property type="entry name" value="Thiamine_BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89957">
        <property type="entry name" value="SSF89957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00106">
        <property type="entry name" value="TIGR00106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thiamine_BP" evidence="3">
        <location>
            <begin position="4"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="76"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="76"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="12167" checksum="BB0147DC5F970C0E" modified="2011-01-11" version="1">MAIAEVTVIPIGTGSTSLSDYVAQMQKVLKTQKGITYELTSMSTIIEGSLDDVFTAIAALHEAPFLAGAKRVSTSVKIDDRRDKPSSSRQKLRSVADKLSGATAGNVTELNPNPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE53</accession>
    <name>E3EE53_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Peptide synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nrsB</name>
        <name evidence="8" type="ORF">PPSC2_04865</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369609.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0994"/>
    <dbReference type="EnsemblBacteria" id="ADO54976">
        <property type="protein sequence ID" value="ADO54976"/>
        <property type="gene ID" value="PPSC2_04865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.980"/>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_0_0_9"/>
    <dbReference type="OMA" id="AEACNFQ"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010071">
        <property type="entry name" value="AA_adenyl_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020459">
        <property type="entry name" value="AMP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010060">
        <property type="entry name" value="NRPS_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00154">
        <property type="entry name" value="AMPBINDING"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01720">
        <property type="entry name" value="NRPS-para261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0045">Antibiotic biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="974"/>
            <end position="1049"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="2036"/>
            <end position="2110"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="1009"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="2071"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="2588" mass="293296" checksum="40B13825D3E28349" modified="2011-01-11" version="1">MRNALIQNIYPLTPMQEGLLYHSILDEHSEAYFDQTVITLNERLNAETLKESFQTLIDRYDVLRTVFVYKETDQPLQVVLANKEATIDYRDITELSEAEQRLYVGNFTINDRKMRFDLEKDLLIRISVLALSDTSCKMVLSFHHIIMDGWCIGTIAKDLFQIYRAYSLGKKPELDAVFPYSRYISWLGQQNKKIALAYWEQQLSGVEEQSGLPLSSKSTEDGSYKLNNHIFTLDEQLTRGLEMIAQQNQVTLSSVFHGIWGLLLQRYNNTKDVVFGSVVSGRPAELEGSENMVGLFINTIPVRICHKEAQTFSQIIKQFQQNMMESGKYHFLSLADIQMLTPLGKSLIHHIIAFENYPITEELAGGEGEQLVSIVETEGFEQTNYDFNIGVIPGKELKVKFGYNSIAYQASDIERIELHLKQIAEQVVSNPHMNVDDIDLLSGEEKHRILRDFNDTDALYPQSQTIQQLFEEQVTLTPNRLAAAFADERLTYLELNERANRLARVLRMKGMQTGQIVGIAAYRSPEMLVGIMAILKAGGAYLPINPEDPLERIQYIAGNSGASILLVQQEIQTTLKDISANISVLAIGADWPTEKTNLEPYSGPEDLAYVIYTSGSTGKPKGVMIRHTSIVNRLHWMQKKYPIGVDDIILQKTPYTFDVSVWELFWWAIAGASVYFLPPDGEKDPKLLVDTVAEQKITTLHFVPSMLSVFLEYVEQHQAEGKLSSIKRVFASGEALTVKQARRFNTLLRKPNGTTLHNLYGPTEATVDATWFDCPDGDDLQSIPIGKPIDNTRLYILDQERRLLPVGIPGELHIAGTGVALGYINQPDLTDERFTDSPFVFGERMYKTGDLAKWLPDGNVEYLGRTDHQVKIRGYRIETGEIEKVLLSHHDIREAVVLSRKDQEDETYLCAYIVSDRELLTQEIRSFLKASLPLYMVPAHLIQIATIPLTPNGKVNRGALPEPHHVIREQGVVAPRTDTETRLVRLWEDILHVSPIGVHSHFFELGGHSLKATILIGKIIREFQVELPMREIFEYPTVESMSKLIERTIGRGAGTFTEIALLSDQTYYPVSSSQRRQMILHQLEGAELVYNMPSVMLVQGHLDQERLKMAFNTLIHRHEALRTSFSWINGEPVQSVHDEVEFELKIHSLTSKEDSEEQHIETVLSEFVQPFDLSRAPLLRGELIPLAENKNMLLVDLHHIISDGVSMSIIMDEFVKAYDGQALPPLSVQYKDYANWHNEQINHGFIKEQESYWLDLFKHEPPVLELPTDFPRPSIQSYEGNTVSRILGDDITEPLHKLAAETQSTLFMILLAVYNVVLSKHARQDDIVIGTPVAGRRHPDTEKIVGMFVNTLALRTNPSAEKSLSAFLDEVKETVLSAFEHQEYPFEQLVEKLALRRDVSRSPIFDTMFVMQNTKGQPLQSSGLEFKPFPFNPGVSRFDLTLSAEETGSYLHLNLEYNSALFQKDTVERFLDHMVVVLRSFVANSTQTIGDTDLLTAVEKELILNKFNGTAAPYPREKTIHQLFEEQVERTPEHPAARYKDRQLTYRELNAQANRVAHVLRKKGIGPDQMVGIAVHRSLEMIVGLLGILKAGGAYLPLHPEDPEERLGFMLEDSEASILLTQRDQLDRLRPHGANRELIAIEDLLMEGMELTGEECEKNPESVNRSTDLVYVIYTSGSTGKPKGVMIEHASLINRLHWMEKRIPFGAEDVILQKTPYTFDVSLWELFSWAIQGSTVCFLEPGGEKDPATIAETVEANGVTAIHFVPSMLGAFLEYIEHSGAAGKMRSVRRVFASGEALMTEHVRRFTRLLGAEGATLHNLYGPTEATVEVAYYDCPAEQEPESIPIGKPIDNVKLYILDHKDRLQPIGVPGELHIGGDCVARGYVNRKELTEEKFVADPYAAGGRMYRTGDLARWLPDGNIEYMGRIDHQVKIRGYRIELGEIEAAILAYEGVQTAVVLARDDRSGGSYLCAYVEHAQEFNVQALKARIKEVLPEYMVPAYIVSMEAMPYLSSGKIDRKALPEPDHSLSIEVDYIPPSNKVETLVAEIWQEVLGYAPIGTNHNFFELGGDSIKAIQISTRLSKHGYRMEIKDLFRHQTIGSLTADLRAVSVQAEQGIIEGEAELSPIQRWFFEQKFTESNYWNQAVMLYSQNGWKEELVDQVLCKLTEHHDALRMTYTANQDKIIPIIHGTNRKAYALTALDVSHESSIEEAIQTLSEAIQRRMNLENGPLVQAGLFHTAQGDHLLLAIHHLVVDGVSWRILLEDLEQGYMQALNNEEILFQAKTHSWKDWTHRLGDDAKGGRPARYKRYWENVIRHASKPLHKDYPAADRRGKDLEICNVRLSKQQTDRLQKDVHKAYSTNVNDLLLTAFGLALRDWTDDDEFTILLEGHGREQIFDDIDITRTVGWFTTMYPIHLDMKHNTDLAYQIKLTKEALRRVPNKGIDFGILEYMTLHDLKSTSQGHFAPEIRFNYHGQIDSGSVAPLFVESKYSAGRTVSEETETPFVLDINGSIEQGILTLGIEYSSREYAESSIQKLGNFLQSRLLEIIEHCSEKKEKEWTPADVSDENLSINDLDEIMAYYKNNTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EED3</accession>
    <name>E3EED3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rluA</name>
        <name evidence="6" type="ORF">PPSC2_06755</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for synthesis of pseudouridine from uracil.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a uridine in RNA = a pseudouridine in RNA</text>
            <dbReference type="Rhea" id="RHEA:48348"/>
            <dbReference type="Rhea" id="RHEA-COMP:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:12069"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RluA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55384.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599559.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19720"/>
    <dbReference type="EnsemblBacteria" id="ADO55384">
        <property type="protein sequence ID" value="ADO55384"/>
        <property type="gene ID" value="PPSC2_06755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1391"/>
    <dbReference type="eggNOG" id="COG0564">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016902_8_5_9"/>
    <dbReference type="OrthoDB" id="1714699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140098">
        <property type="term" value="F:catalytic activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009982">
        <property type="term" value="F:pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034470">
        <property type="term" value="P:ncRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001522">
        <property type="term" value="P:pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02869">
        <property type="entry name" value="PseudoU_synth_RluA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006225">
        <property type="entry name" value="PsdUridine_synth_RluC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006224">
        <property type="entry name" value="PsdUridine_synth_RluC/D_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00005">
        <property type="entry name" value="rluA_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01129">
        <property type="entry name" value="PSI_RLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PseudoU_synth_2" evidence="5">
        <location>
            <begin position="131"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606225-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55384.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="337" mass="38183" checksum="C5724724BDCF0456" modified="2015-05-27" version="2">MNNRKPQRKNHTKSTSNSSHSRRNHKPAGKSGSYRPEAQRKTHTLDKAPAKTYIVQEPAELLSFLVEHVTGMGRNSIKSALARGQVSVNGIPRTVHNFPLEQGQTVALSKEKVAPVVPLTGLRILHEDEAIIVIHKDAGLLSVASAQEQEVTAYRQLTAHVRREHPYNRIFVLHRLDRDTSGVMMFAKSEAIQQEMQQAWKEVVYERTYIALVEGQVKKETGTITSWLKESKTLKMYSSPYPNDGQHAVTHYKRLQANRHFSLLEVRLETGRKNQIRVHMEDIGHPIVGDKKYGSKSKSIGRLGLHAKVLSFIHPLTGVLLRFESDTPKTFLNPFRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EET1</accession>
    <name>E3EET1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cpsY</name>
        <name evidence="3" type="ORF">PPSC2_08495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370387.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21100"/>
    <dbReference type="EnsemblBacteria" id="ADO55768">
        <property type="protein sequence ID" value="ADO55768"/>
        <property type="gene ID" value="PPSC2_08495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1785"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_32_2_9"/>
    <dbReference type="OMA" id="FHFSEEI"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33832" checksum="BF75C00366908CCF" modified="2011-01-11" version="1">MTLQQLKYVIEVANRGSMNEAAKRLFISQPSLSNAIRDLEEEIHITIFERTNKGISLSKEGVEFLGYARQVVEQAELLESRYLDAKPSPQHFAVSTQHYAFAVNAFVNLVNQYGQDEYELALRETKTHEIIQDVKSLRSEIGILYLNEFNAKVINKLLKDANLQFNSLFTAKPHIFISANNPLSRQSIVTIDQLHPYPYLSFEQGEYNSFHFSEEILSTLSHPKSIRVNDRATLFNLLIGLNGYTISTGVISADLNGNEIISVPLECDESINVGWICHKNVALSKLATVYVEALHEAIGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF11</accession>
    <name>E3EF11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(Fe-S)-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-685</name>
        <name evidence="2" type="ORF">PPSC2_02850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369171.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15665"/>
    <dbReference type="EnsemblBacteria" id="ADO54531">
        <property type="protein sequence ID" value="ADO54531"/>
        <property type="gene ID" value="PPSC2_02850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.542"/>
    <dbReference type="eggNOG" id="COG1600">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061526_0_0_9"/>
    <dbReference type="OMA" id="CATGPCA"/>
    <dbReference type="OrthoDB" id="1478472at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="210"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="31751" checksum="C2DAB4049A14293E" modified="2011-01-11" version="1">MVTPVPDMKELIAAEMKAYVSEDKGNFCEELQSPYYEEPIIQFAEANDPLFEQYKTVVGSDHATPQEAFERTFGTGSFGGGTVVSVVLPISETIRKANRAQKARASREWALLRTFGDEYFVRSARQHLAGYLIGLGYRAVAPLDTDWYSIHGAVGGPVSNWSERHIAYAAGLGTFSINDGFITEKGIAIRLLSVVTDLQVPPDVRVSSNLSHTGNCLLCSKGICGVCITRCPVQAISKEGGHDKIACMKFVYGEESRKWAVLNGGEAKSGAGCGLCQTKVPCESRNPMRTAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFB7</accession>
    <name>E3EFB7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369713.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18255"/>
    <dbReference type="EnsemblBacteria" id="ADO55080">
        <property type="protein sequence ID" value="ADO55080"/>
        <property type="gene ID" value="PPSC2_05340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1083"/>
    <dbReference type="eggNOG" id="ENOG5033AKY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_177522_0_1_9"/>
    <dbReference type="OMA" id="NSNLDWH"/>
    <dbReference type="OrthoDB" id="2026601at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024980">
        <property type="entry name" value="DUF3886"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13025">
        <property type="entry name" value="DUF3886"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="9805" checksum="A371BE7CCADDD443" modified="2011-01-11" version="1">MAKKRNSSFAAPAAQDKPATLKDLLSQDVLNKLKAQANEAQAEQDKRKEDERQRALEAKKAEQKKLDNNFEHLLNNSDLDWHKYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFL5</accession>
    <name>E3EFL5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-deoxy-7-phosphoheptulonate synthase</fullName>
            <ecNumber evidence="3">2.5.1.54</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ccmA1</name>
        <name evidence="3" type="ORF">PPSC2_07320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.54" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370133.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20300"/>
    <dbReference type="EnsemblBacteria" id="ADO55506">
        <property type="protein sequence ID" value="ADO55506"/>
        <property type="gene ID" value="PPSC2_07320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1512"/>
    <dbReference type="eggNOG" id="COG2876">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062599_0_0_9"/>
    <dbReference type="OMA" id="YRNIPEW"/>
    <dbReference type="OrthoDB" id="687380at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003849">
        <property type="term" value="F:3-deoxy-7-phosphoheptulonate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016832">
        <property type="term" value="F:aldehyde-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006218">
        <property type="entry name" value="DAHP1/KDSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041071">
        <property type="entry name" value="DAHP_snth_FXD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006268">
        <property type="entry name" value="DAHP_syn_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18152">
        <property type="entry name" value="DAHP_snth_FXD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00793">
        <property type="entry name" value="DAHP_synth_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01361">
        <property type="entry name" value="DAHP_synth_Bsub"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAHP_snth_FXD" evidence="2">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="DAHP_synth_1" evidence="1">
        <location>
            <begin position="82"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="345" mass="36977" checksum="8F7E14D1BEC32270" modified="2011-01-11" version="1">MIVIAGVQTPEEHIQAIVEVIEKEGLQAHVSRGSDRTIIGLIGSVEPKLAEHLRQMKGVENVVKISKSYKLASRDFHPENTVISIKGVNIGGGELVVMGGPCAVESAAQIDEIAGLVKAAGAQVLRGGAFKPRTGPYSFQGTGVEGLIMMAEAGQKHDLLTITEVMTPEYVDICAEYADILQVGTRNMQNFDLLRKLGTCGKPVLLKRGFSSTYDEFLNAAEYILAGGNPNVMLCERGIRTFETYTRNTLDLSAIPVLQQLSHLPVISDPSHGTGRRELVVPMTKASVAAGADGLIIEMHTDPDNSMTGDGVQSLFPDQFADLLKDLELLAPAIGKTFHTPSSVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFV0</accession>
    <name>E3EFV0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Trans-2-enoyl-CoA reductase [NADH]</fullName>
            <shortName evidence="9">TER</shortName>
            <ecNumber evidence="9">1.3.1.44</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fabV</name>
        <name evidence="12" type="ORF">PPSC2_08735</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>a 2,3-saturated acyl-CoA + NAD(+) = a (2E)-enoyl-CoA + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:18177"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58856"/>
            <dbReference type="ChEBI" id="CHEBI:65111"/>
            <dbReference type="EC" id="1.3.1.44"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 9">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the TER reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.44" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370441.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21210"/>
    <dbReference type="EnsemblBacteria" id="ADO55822">
        <property type="protein sequence ID" value="ADO55822"/>
        <property type="gene ID" value="PPSC2_08735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1840"/>
    <dbReference type="eggNOG" id="COG3007">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057698_1_0_9"/>
    <dbReference type="OMA" id="LDNWEMR"/>
    <dbReference type="OrthoDB" id="678530at2"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050343">
        <property type="term" value="F:trans-2-enoyl-CoA reductase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01838">
        <property type="entry name" value="FabV_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024906">
        <property type="entry name" value="Eno_Rdtase_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024910">
        <property type="entry name" value="Enoyl-CoA_Rdtase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010758">
        <property type="entry name" value="Trans-2-enoyl-CoA_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37480">
        <property type="entry name" value="PTHR37480"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07055">
        <property type="entry name" value="Eno-Rase_FAD_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12242">
        <property type="entry name" value="Eno-Rase_NADH_b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12241">
        <property type="entry name" value="Enoyl_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 9" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="3 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6 9" id="KW-0520">NAD</keyword>
    <keyword evidence="5 9 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Enoyl_reductase" evidence="11">
        <location>
            <begin position="81"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="Eno-Rase_FAD_bd" evidence="10">
        <location>
            <begin position="322"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="9">
        <location>
            <position position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="47"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="73"/>
            <end position="74"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="110"/>
            <end position="111"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="138"/>
            <end position="139"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="272"/>
            <end position="274"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="site" description="Plays an important role in discriminating NADH against NADPH" evidence="9">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001615"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF12241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="392" mass="43113" checksum="01C0A9D9E53129F1" modified="2011-01-11" version="1">MIIKPKIRGFICTTAHPAGCTAHVNRQIDYIKDSTSLQGAKKVLVIGASTGYGLASRIAVSFGMGADTIGVSFERPASEGRTASAGWYNTVAFEKAARAAGYIAESINGDAFSHEIKQETLKLVKEKLGKVDLIVYSVASPRRTHPDTGETFNSVLKPIGQPFTNKTVNTNTGVVSEITLEPATQEEIENTITVMGGEDWSLWLKALEEADLLAEGVTTLAYSYIGPEITEAIYRKGTIGQAKNDLEATAHTLTKQLEPYHGKAYVSVNKALVTQSSSAIPVVPLYISLLFKVMKEKGLHEGCIEQAQRLFEMLYNGSTVETDEEGRIRLDNWEMREDVQQAVKAAWSEITTENVSELGDLEQYRLDFLQLFGFGFDEIDYELDVDPEVHTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGE6</accession>
    <name>E3EGE6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8 11">Phosphoglycerate kinase</fullName>
            <ecNumber evidence="2 8 11">2.7.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 13" type="primary">pgk</name>
        <name evidence="13" type="ORF">PPSC2_00955</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8 11">
            <text>(2R)-3-phosphoglycerate + ATP = (2R)-3-phospho-glyceroyl phosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:14801"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57604"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8 12">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8 12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 11">Belongs to the phosphoglycerate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.3" evidence="2 8 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54174.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599369.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13945"/>
    <dbReference type="EnsemblBacteria" id="ADO54174">
        <property type="protein sequence ID" value="ADO54174"/>
        <property type="gene ID" value="PPSC2_00955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.178"/>
    <dbReference type="eggNOG" id="COG0126">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025427_0_2_9"/>
    <dbReference type="OrthoDB" id="462069at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00185"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004618">
        <property type="term" value="F:phosphoglycerate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00318">
        <property type="entry name" value="Phosphoglycerate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1260">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00145">
        <property type="entry name" value="Phosphoglyc_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001576">
        <property type="entry name" value="Phosphoglycerate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015911">
        <property type="entry name" value="Phosphoglycerate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015824">
        <property type="entry name" value="Phosphoglycerate_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036043">
        <property type="entry name" value="Phosphoglycerate_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11406">
        <property type="entry name" value="PTHR11406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00162">
        <property type="entry name" value="PGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000724">
        <property type="entry name" value="Pgk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00477">
        <property type="entry name" value="PHGLYCKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53748">
        <property type="entry name" value="SSF53748"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00111">
        <property type="entry name" value="PGLYCERATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8 12" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="5 8 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8 11" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="8 9">
        <location>
            <begin position="21"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 9">
        <location>
            <begin position="59"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="323"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <begin position="349"/>
            <end position="352"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000724-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000724-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54174.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="393" mass="42283" checksum="F9436A3B51B9B63A" modified="2015-05-27" version="2">MNKKSVRDIELNGKRVFVRVDFNVPVEDGKITDDKRIRETLPTINYLIEKGAKVILASHFGRPKGQVVESMRLTAAGVRLSELLKKPVVKVDEAVGEAVKAKVAELQNGDVLLLENVRFYPGEEKNDPELAKQFAELADIFVNDAFGAAHRAHASTEGIAHFLPAVSGLLMEKELSVIGKALSNPDRPFTAIIGGSKVKDKIDVIDNLLNIADNVIIGGGLTYTFFKAQGHEVGQSLLDESKLDVALGFIEKAKKLGKNFYLPVDIVISDDFSATANTNIVDIDGIPADWEGVDIGPKTRKIYADVIKNSKLVVWNGPMGVFEIEPFAGGTREVAEACATTDAYTIIGGGDSAAAAEKFHLADKMDHISTGGGASLEFMEGKALPGVVALNDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGR0</accession>
    <name>E3EGR0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">XkdN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xkdN</name>
        <name evidence="1" type="ORF">PPSC2_05650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429164.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18555"/>
    <dbReference type="EnsemblBacteria" id="ADO55144">
        <property type="protein sequence ID" value="ADO55144"/>
        <property type="gene ID" value="PPSC2_05650"/>
    </dbReference>
    <dbReference type="GeneID" id="66573824"/>
    <dbReference type="KEGG" id="ppm:PPSC2_05650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1150"/>
    <dbReference type="eggNOG" id="ENOG5032WC6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114419_1_0_9"/>
    <dbReference type="OMA" id="IREECTT"/>
    <dbReference type="OrthoDB" id="1768783at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2220.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014986">
        <property type="entry name" value="XkdN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038559">
        <property type="entry name" value="XkdN-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08890">
        <property type="entry name" value="Phage_TAC_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="15885" checksum="02C6CDCCC3D05099" modified="2011-01-11" version="1">MSLNENMTEEQILDSLFEAAEKLPEETVRIKRLDMKIVLHGLTSSKVDSIRERCTIRRTVKGAVDEKVDTETFNALLISEATGKLEVKGLSLNGWGDPRITSRLKLSGGEQSVRRMLLAGELDAVGDKVLELSGFGVEIADLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGU0</accession>
    <name>E3EGU0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ykvT</name>
        <name evidence="3" type="ORF">PPSC2_05770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369806.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18735"/>
    <dbReference type="EnsemblBacteria" id="ADO55174">
        <property type="protein sequence ID" value="ADO55174"/>
        <property type="gene ID" value="PPSC2_05770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1180"/>
    <dbReference type="eggNOG" id="COG3773">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_936410_0_0_9"/>
    <dbReference type="OMA" id="IVKEHRW"/>
    <dbReference type="OrthoDB" id="682655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011105">
        <property type="entry name" value="Cell_wall_hydrolase_SleB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042047">
        <property type="entry name" value="SleB_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07486">
        <property type="entry name" value="Hydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_2" evidence="2">
        <location>
            <begin position="168"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="39"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="29979" checksum="36EDB40931CE7831" modified="2011-01-11" version="1">MEIVKEHRWFAPLLSVLLVCILGIGLYAEVQQTQNNHKNAPMQSLSWSGNTSIPTYGDRMGTHNGSNRTSPIFVAAHGQPSWKEIMPTPLPASQMKQVEQARNNAVTGKKKPEVQHSKSAILTPPTTIYFTKTKMLTQDDKALSTWSYPVSAKELLLLQKIVMAEAEGEPYEGKVAVANVVLNRLRSASFPDTIQAVIYQKAQFSPVANGRLRRVHPNQDCIRAVTAALNGHKAVPDNTCFFLSLTLAQDLTVHHSRTKVKTIGHHTFYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGW6</accession>
    <name>E3EGW6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Lipopolysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yveK</name>
        <name evidence="9" type="ORF">PPSC2_05890</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369832.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18855"/>
    <dbReference type="EnsemblBacteria" id="ADO55200">
        <property type="protein sequence ID" value="ADO55200"/>
        <property type="gene ID" value="PPSC2_05890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1206"/>
    <dbReference type="eggNOG" id="COG3944">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082668_1_1_9"/>
    <dbReference type="OMA" id="KICEVFV"/>
    <dbReference type="OrthoDB" id="1184929at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009103">
        <property type="term" value="P:lipopolysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003856">
        <property type="entry name" value="LPS_length_determ_N_term"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02706">
        <property type="entry name" value="Wzz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="173"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Wzz" evidence="8">
        <location>
            <begin position="3"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="223"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="233"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27536" checksum="3E0504380EC3FA82" modified="2011-01-11" version="1">MQLKEYIRLIRKRMWLIGSIVLLVCTVVGIKNVYFTPQVYEATAKLIINQTPRPDRAGVVDYSVVQTNIALTNSYKQIMISSAIMDQVVASFPDLKVTPSALAQKLRVNTAGDSQVMDVTVRDLSYTKAVKTVNAVAKVFKRQIPSIMKMDNVTILSEASLNDPAVPVNNNPAIQIFIAFAISLLLGIGLAFLLEVLDDTFKNEEDIEKELGLPTLSLITKMKKEDRRSDSSTTTPKQVGEGQYAAINQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH01</accession>
    <name>E3EH01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">RNA polymerase sigma factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sigW5</name>
        <name evidence="5" type="ORF">PPSC2_07575</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1584"/>
    <dbReference type="EnsemblBacteria" id="ADO55561">
        <property type="protein sequence ID" value="ADO55561"/>
        <property type="gene ID" value="PPSC2_07575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1565"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_0_9"/>
    <dbReference type="OMA" id="ETASIMK"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="3">
        <location>
            <begin position="66"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="4">
        <location>
            <begin position="157"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="125"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="27289" checksum="F13403778366FB48" modified="2011-01-11" version="1">MTLRATKPQGLFYMDQVREKMQIRSLRNETNKSRTVRGGERVELTDDHSIIEVVLKGNKQAYADIVRRYQNKLYGLFRKMGSSEVDAQDLTQETLIKAYRKLAAHNPSQSFAGWMYTIAVNLQKDRGRRKDPKSPAQEDTYERETPESKLLQKELRFELDRLLETLPEHYRLVLILRYTNQLSHKEIASITGMSVRQVNNAVHRAKISLRKTVEARKGQRYEILGSYNNEKSQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH02</accession>
    <name>E3EH02_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4179 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_07580</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370189.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55562">
        <property type="protein sequence ID" value="ADO55562"/>
        <property type="gene ID" value="PPSC2_07580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1566"/>
    <dbReference type="eggNOG" id="COG5662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_514666_0_0_9"/>
    <dbReference type="OMA" id="EFFITER"/>
    <dbReference type="OrthoDB" id="909161at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025436">
        <property type="entry name" value="DUF4179"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13786">
        <property type="entry name" value="DUF4179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="123"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4179" evidence="3">
        <location>
            <begin position="122"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="66"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="564" mass="63028" checksum="3073E6836BF4E298" modified="2011-01-11" version="1">MRFWGRTTTKKANLEAVDGKSMIEDRNWENSLFHERLPDEFTDQVMLELEGVEIEPADRADASDQDLSRYSASGQPAETEAQIMTGSTGHGKRQQNAAAYDDTSIVAQVKHYRLTRCSSQLKVWSVVVVVSVFAVSTLLYTQPTLADTVRSLFAKDSYVDSGMKKARETGLVQISGASAKDQGYTLKVNELIADSTRMIIGIDVFDAKGNAIAGDFGLQDVDFSIFDNQRGDIGAVPFEVSTGSNETTSRIEFDFTRPVLTDKLQLSAHIRELRLYADKLNVEAPIKTVKGDWRLNLEADLTKAKEQTLLTPIDKTYETPSGLQIHMQGATRTPSGGSLEYTTELTPEAAGRALNGKSGFHELKYHLEDAQGKWLGDNREPEFERRSKLDRWSGKTQWFYQFNDFAYDKQQIRFVLDGYIIREKSEMSVVLDPAQTSAVHPVKFEDSGDAYLFKGLKLRPSSNSGKMYATIPVSGTFSSPNFTQDIWVAVDENGREYSMFFGGGYTTDRAGVIEPQEDAGYFVDGLNQMPKQLTLKRKIVNHLYKDADWSFVIPQTGTNGVILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHI5</accession>
    <name>E3EHI5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YmfK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ymfK</name>
        <name evidence="2" type="ORF">PPSC2_10220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56138.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_034095171.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22690"/>
    <dbReference type="EnsemblBacteria" id="ADO56138">
        <property type="protein sequence ID" value="ADO56138"/>
        <property type="gene ID" value="PPSC2_10220"/>
    </dbReference>
    <dbReference type="GeneID" id="66577871"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2153"/>
    <dbReference type="eggNOG" id="ENOG502Z7SI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1000798_0_0_9"/>
    <dbReference type="OrthoDB" id="1069145at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024514">
        <property type="entry name" value="DUF3388"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016784">
        <property type="entry name" value="UCP021288_ACT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11868">
        <property type="entry name" value="DUF3388"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021288">
        <property type="entry name" value="UCP021288_ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT" evidence="1">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56138.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="28203" checksum="F9F1CE0A0AF40D59" modified="2015-05-27" version="2">MEYKIHKNRPGLLGDIASMLGILGVNILTINGVEGERRGMLLETDDDEKIRILGDTLKKASNITVTALRAPRLVDILAVRHGRYIDRDSDDRKTFRFTRDELGLLVDFLGEVLKRDGNQVIGLRGMPRVGKTESIIASSVCAMKRWTFVSSTLLRQTVRSQLSEEEMNPNNVFIIDGIVSTIRSNERHYHLLQEIMSMPSTKVIEHPDVFVRESGYSFDDFNIIIELRNNPAEEIIYDTFTASYTEDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHJ6</accession>
    <name>E3EHJ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Dipeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">dp2</name>
        <name evidence="1" type="ORF">PPSC2_10270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370756.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22740"/>
    <dbReference type="EnsemblBacteria" id="ADO56149">
        <property type="protein sequence ID" value="ADO56149"/>
        <property type="gene ID" value="PPSC2_10270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2164"/>
    <dbReference type="eggNOG" id="COG2355">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031404_2_1_9"/>
    <dbReference type="OMA" id="IDMHCDL"/>
    <dbReference type="OrthoDB" id="1145595at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070573">
        <property type="term" value="F:metallodipeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008257">
        <property type="entry name" value="Pept_M19"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10443">
        <property type="entry name" value="PTHR10443"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01244">
        <property type="entry name" value="Peptidase_M19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51365">
        <property type="entry name" value="RENAL_DIPEPTIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="355" mass="39747" checksum="5E6DEC68F188BA2B" modified="2011-01-11" version="1">MNDKFEANWPVVDLHCDVLCKMQLDSQVDFSHSSLDVTKERLLEGNVRLQTFAIYISQVLGTPRFEHVVRQIELFRQHVTSSSGGLKPLLWREDLAALKNMSAVRQVEQVQHTGVEKQAGKMTNGYESGTNRTEPPWALLSLEGVDALEGNPFYADVCYAMGIRLIGLTWNYANWAADGIMELRGGGLTRKGRDLVDRCNSMGLLLDVSHLSVQGFWEVMEEAALPPIASHSNAFAKCAHPRNLRDEQIRALIARNGRIGLTFVTMFLKEQGTVHAEDLLPHIDHICSLGGERHLMFGSDFDGIEAHVRGLEHAGKYPAFAELLLKHYSEELVKGWLGEHALDYLRTNLPSKMSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHL0</accession>
    <name>E3EHL0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yheH</name>
        <name evidence="10" type="ORF">PPSC2_10335</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370770.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22805"/>
    <dbReference type="EnsemblBacteria" id="ADO56163">
        <property type="protein sequence ID" value="ADO56163"/>
        <property type="gene ID" value="PPSC2_10335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2177"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_7_9"/>
    <dbReference type="OMA" id="VMVPQDG"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="150"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="225"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="252"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="349"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="21"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="432"/>
            <end position="665"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="464"/>
            <end position="471"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="696" mass="77007" checksum="2548DE4DFF4298EA" modified="2011-01-11" version="1">MKPNIGKRLFQYALTSKAGFIAALIALAIGVAAELAGPFIAKTMIDDHMLAIEKPFYETTSVDGAVSYAGTHFKREDRFEAGEAKGREARILQVGKSFVFVDGSIQVADGNRSFTNGTLTVTRSSDTFHYKAKALTADELYSFYKPEMPGIFQLIGWYCFFLVVSIFAEFGKTYWLQSSANKVIQKLRLDLYAHIQRLPVYFFDNLPAGKVVSRVTNDTEAVKDLFVAVLSNFTSGIVTMTGVYVALFLLDFRLGLISLFIVPLLILWIILYRKVATRYNTIIRSRLSEINAIINESIQGMSIIRVFRHQKQTQQEFEELNDDYMKHQNKMLNLNAFTSHNLVNVLRNLAFAVVLWYFGSAALGTTGSAISLGVLYAFVDVLGRLFQPITGMVNQLAVLDTSIVSSGRVFELMDETGEPVTDGTMPRYKGQVEFNDVSFAYKKDDVLKHISFTAQPGQTVALVGHTGSGKSSIINLLFRFYDPQKGTITIDGTPVKNIPKQWLRHHMGIVLQDPYLFTGTVASNVSLGDSRITREQVNKALHDVGADKLLAHLPQGFDEPVIEKGSTLSAGQRQLISFARALAFDPAILILDEATANIDTETEALIQSALEVLKKGRTTFIIAHRLSTIRSADQILVLHRGEIVERGSHDELMAQGGRYFQMYQLQSGTVAAESASSSATSSAQNDLLTGKIAFKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHL3</accession>
    <name>E3EHL3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YneR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yneR</name>
        <name evidence="2" type="ORF">PPSC2_10345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HesB/IscA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370773.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22815"/>
    <dbReference type="EnsemblBacteria" id="ADO56166">
        <property type="protein sequence ID" value="ADO56166"/>
        <property type="gene ID" value="PPSC2_10345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2179"/>
    <dbReference type="eggNOG" id="COG4841">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_163967_2_1_9"/>
    <dbReference type="OMA" id="QWYIKEL"/>
    <dbReference type="OrthoDB" id="1891602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008326">
        <property type="entry name" value="UCP034852"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF034852">
        <property type="entry name" value="UCP034852"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="SSF89360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11544" checksum="5B6FBC687179AB67" modified="2011-01-11" version="1">MSIQVTEPAAQWYIKELGLNRGDSIRFFVRYSSGGGLHPGFSLGIAVEPPQHPALQHEAAGITFYMEDQDYWYLKGHHLEVKYLKEHDDIIYTYEKDEQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHQ4</accession>
    <name>E3EHQ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pullulanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370922.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23410"/>
    <dbReference type="EnsemblBacteria" id="ADO56316">
        <property type="protein sequence ID" value="ADO56316"/>
        <property type="gene ID" value="PPSC2_11020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2333"/>
    <dbReference type="eggNOG" id="ENOG5032Z6A">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2331137_0_0_9"/>
    <dbReference type="OMA" id="FCKEHVQ"/>
    <dbReference type="OrthoDB" id="2009873at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045424">
        <property type="entry name" value="DUF6509"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20119">
        <property type="entry name" value="DUF6509"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11626" checksum="ABE06B2D758B0A25" modified="2011-01-11" version="1">MLNFTAYTVDQIKDAFGILSGQRYEFIIEVEVEEDDELYTENGIYIRALYLVDEEKTGLLKYELFEKATDRYIELELEEDELQAVENFCKEHVQDGAVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHU7</accession>
    <name>E3EHU7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbon-nitrogen hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371044.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23975"/>
    <dbReference type="EnsemblBacteria" id="ADO56439">
        <property type="protein sequence ID" value="ADO56439"/>
        <property type="gene ID" value="PPSC2_11605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2454"/>
    <dbReference type="eggNOG" id="COG0388">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030130_4_0_9"/>
    <dbReference type="OMA" id="NAPYFCQ"/>
    <dbReference type="OrthoDB" id="1583074at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050126">
        <property type="term" value="F:N-carbamoylputrescine amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006596">
        <property type="term" value="P:polyamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017755">
        <property type="entry name" value="N-carbamoylputrescine_amidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03381">
        <property type="entry name" value="agmatine_aguB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="33000" checksum="AA94E9EB342C2588" modified="2011-01-11" version="1">MRKVKVAATQMSCSTNIEENISKAEKLVREAAAQGAQIILLQELFETPYFCQKEKSDYYVYATELEHNKAVNHFKKIAKELQVVLPISFYEKKNYARYNSLAVIDADGEVLGKYRKSHIPDGPGYEEKFYFNPGDTGFKVWNTRYAKIGVGVCWDQWYPEAARCMALMGAEILFYPTAIGSEPQDSSIDSKDHWQTCMLGHAASNLIPVIASNRIGMETDEESSINFYGSSFIAGPQGNKITEASRTDEEVLTAEFDLDELEVGRIEWGIFRDRRPELYKMIATYDGDLKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIZ9</accession>
    <name>E3EIZ9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ESAT-6-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">esxA</name>
        <name evidence="2" type="ORF">PPSC2_10410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the WXG100 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430133.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EIZ9"/>
    <dbReference type="STRING" id="1406.LK13_22875"/>
    <dbReference type="EnsemblBacteria" id="ADO56180">
        <property type="protein sequence ID" value="ADO56180"/>
        <property type="gene ID" value="PPSC2_10410"/>
    </dbReference>
    <dbReference type="GeneID" id="66577833"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2194"/>
    <dbReference type="eggNOG" id="COG4842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_158563_3_1_9"/>
    <dbReference type="OMA" id="MTEIKIR"/>
    <dbReference type="OrthoDB" id="1999616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036689">
        <property type="entry name" value="ESAT-6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010310">
        <property type="entry name" value="T7SS_ESAT-6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06013">
        <property type="entry name" value="WXG100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140453">
        <property type="entry name" value="SSF140453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03930">
        <property type="entry name" value="WXG100_ESAT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU362001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="10247" checksum="D14504EE3D55DB3D" modified="2011-01-11" version="1">MAGRILITPEQVDQVANQFKQSGEQSQQIVSSLTQSISGMEGQWEGMTKQRFFQEFQEASKQMQAFVTTLNSISQELTAIANKFRTVDQAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ34</accession>
    <name>E3EJ34_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rha family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370821.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2243"/>
    <dbReference type="EnsemblBacteria" id="ADO56215">
        <property type="protein sequence ID" value="ADO56215"/>
        <property type="gene ID" value="PPSC2_10555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2231"/>
    <dbReference type="eggNOG" id="ENOG50335Y4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_192101_0_0_9"/>
    <dbReference type="OMA" id="TRKAKKY"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7567" checksum="F6C389188217BB6E" modified="2011-01-11" version="1">MNKRNPVTPLGWKIKQKLVEIQMDQRTFCETYHIPASRLSNLIHGTRKAKKYRKQVCQLLGIEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJB7</accession>
    <name>E3EJB7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine protein kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">afsK</name>
        <name evidence="2" type="ORF">PPSC2_11435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371009.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2432"/>
    <dbReference type="EnsemblBacteria" id="ADO56404">
        <property type="protein sequence ID" value="ADO56404"/>
        <property type="gene ID" value="PPSC2_11435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2419"/>
    <dbReference type="eggNOG" id="COG1520">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_608128_0_0_9"/>
    <dbReference type="OMA" id="ANTFMID"/>
    <dbReference type="OrthoDB" id="1377603at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018391">
        <property type="entry name" value="PQQ_beta_propeller_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002372">
        <property type="entry name" value="PQQ_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01011">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13360">
        <property type="entry name" value="PQQ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00564">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168243" evidence="1">
        <location>
            <begin position="34"/>
            <end position="451"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="451" mass="49707" checksum="E503C804F04DA492" modified="2011-01-11" version="1">MRKTIHNALFTRLAIVSIGLPLICGGFAEKASAEHSAVSMSNGAYSTVIQAPVIKPTWSLPVIPINRDQYSEQAVAVAVKGKVFAVDPNYRLVALDASSGRKLWQYGDQLTPILIHSNGLIYGMTQSGSIYAVTASGKKVWTTSLGFTKADHIHRIGSTVYITQSEQTAAVDAASGKLKWKISEEKDLYHGLNKLMETDGVLIRNYDVQGSLTLEQINAYDAKTGKKLWDSFRTSFPLAVKDGIVYSVANTFMIDDDPVNHKVTIAQYDLKTGKSKGDRQYRWTEPENKDGVYRSGGVYGSAFLYGKDLYVFQGETLASYDFWNYKPDSKPARKWAQNGYDQLIPLLSIHEGRMFYQDFSTSRLTAMKLASGQFIHYDGDNPTVQVDVFGKGVYVGQSDGVFHGYDLTSLKPVFTVNTGSRSFGPTLKSGGMIFIQSGNRLLGVKLPASLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJE0</accession>
    <name>E3EJE0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable transcriptional regulatory protein PPSC2_11550</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yeeI</name>
        <name evidence="6" type="ORF">PPSC2_11550</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TACO1 family. YeeN subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56427.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599726.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23915"/>
    <dbReference type="EnsemblBacteria" id="ADO56427">
        <property type="protein sequence ID" value="ADO56427"/>
        <property type="gene ID" value="PPSC2_11550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2442"/>
    <dbReference type="eggNOG" id="COG0217">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062974_2_0_9"/>
    <dbReference type="OrthoDB" id="1304328at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.980">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00693">
        <property type="entry name" value="Transcrip_reg_TACO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00918">
        <property type="entry name" value="Transcrip_reg_TACO1_YeeN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017856">
        <property type="entry name" value="Integrase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002876">
        <property type="entry name" value="Transcrip_reg_TACO1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026564">
        <property type="entry name" value="Transcrip_reg_TACO1-like_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026562">
        <property type="entry name" value="Transcrip_reg_TACO1_YeeN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029072">
        <property type="entry name" value="YebC-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12532">
        <property type="entry name" value="PTHR12532"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01709">
        <property type="entry name" value="Transcrip_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75625">
        <property type="entry name" value="SSF75625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01033">
        <property type="entry name" value="TIGR01033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 5" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56427.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="26354" checksum="112852E0831F7266" modified="2015-05-27" version="2">MGRKWNNIKEKKASKDANTSRIYAKFGVEIYVAAKQGEPDPESNRVLRVVLERAKTYNVPKAIIDRAIEKAKGAGDENYVELRYEGFGPNGSMVIVDALTNNVNRTASDVRSAFTKNGGSLGVSGSVAYMFDSTAVIGLVGKTADEVLELLMEADVEVRDIIEEDEAVIVYAEPDQFHAVQEAFKQAGVTEFTVAELTMLAQNDITLPEDAQVQFDKLIDALEDLEDVQQVYHNVDSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJH8</accession>
    <name>E3EJH8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_12025</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371132.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24350"/>
    <dbReference type="EnsemblBacteria" id="ADO56528">
        <property type="protein sequence ID" value="ADO56528"/>
        <property type="gene ID" value="PPSC2_12025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2544"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_0_9"/>
    <dbReference type="OMA" id="IMTAFEM"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="3"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="266"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="42642" checksum="24C67ECBED06526A" modified="2011-01-11" version="1">MYKVMIVDDEPLFRDFLRIKIDWESHGFRVCCEARNGREALQEAERHQPHLALVDINMPFIDGIELAQRLKVKFERIVIVFISGHNEFEYLQKAVRTGVQDYLLKPFNAEEMLSMLERIKPKLPVLPQESESAELRGQGGEALHSRAGMPDLGHLRDAVVLDLRMKDSETLEEVRKAIRQLSKYNWGDEYADAMLMGIVSLALSFASERGIPYDQLWENGGDNSPYERLRELDSWEATEGWMLTLYRKLIQLMENMRPTKASNLFAAAINYIEEHYADSELSAEQVSCGVFVDPSYLRRVFRKESGFSIVDHITHIRMKKAKELLLKGNRKLSEIAESVGYSDPNYFSKCFKKRFGMTPTEYEQLKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK60</accession>
    <name>E3EK60_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386183.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59769">
        <property type="protein sequence ID" value="ADO59769"/>
        <property type="gene ID" value="PPSC2_26320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5544"/>
    <dbReference type="HOGENOM" id="CLU_631412_0_0_9"/>
    <dbReference type="OrthoDB" id="246216at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="434" mass="49972" checksum="B1C63F93D0473D8A" modified="2011-01-11" version="1">MATKNRLKIGIDTKTNEDIFLKEGNLLIVGKEGATKKDTIVYPILNQMISQKDVGITIFDHTGLVSKVAYAIAKKNRRKISYVDPMLRRVKFNPLRGNEDDVISNFVNFFCSYNMESPRFFIDTGSRLLTYSIKVLKTTMGQNATLLDLQKFLENIKGFGRHMVALFSRVSSSDPMTIQEQELITSWFLQDYFNDKSKVYEYTSGVRAFLMDLLSNKAIAKMFNTSEEGEFLELDFKKHIENKEVVIVNTNPADLGGAYSKIQTLIALHLQNVILHETKPVPHMLYFKELLHLRPLFSDLFQASSFDHTFSMIAEMQNGFHYEYLHYEYKNGSFISSFPNVVIMPGTVMKEEFRNTIFSRREVEIMEDADADMDQHEFYYRMIDSCAKGYTVSGAAKGALLPAEESEFLQKRIKRYTREFENQKRFSGGAVSTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKL2</accession>
    <name>E3EKL2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59844.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886228.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0455"/>
    <dbReference type="EnsemblBacteria" id="ADO59844">
        <property type="protein sequence ID" value="ADO59844"/>
        <property type="gene ID" value="PPSC2_25955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5458"/>
    <dbReference type="HOGENOM" id="CLU_2274609_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59844.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="11754" checksum="C7DFB4703638D1E3" modified="2015-05-27" version="2">MDKKRYLARHWKYLMRSGHTLETISRKSKKAICQHFDGIAKDYEQDESFRLSGLPDCEYCGGSRYDPFDIASYECGECEGTGKTGWIYKDGKRVPGKQVHHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKR2</accession>
    <name>E3EKR2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385927.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0119"/>
    <dbReference type="EnsemblBacteria" id="ADO59513">
        <property type="protein sequence ID" value="ADO59513"/>
        <property type="gene ID" value="PPSC2_27530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5827"/>
    <dbReference type="eggNOG" id="COG1988">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097802_3_1_9"/>
    <dbReference type="OMA" id="GHRGMTH"/>
    <dbReference type="OrthoDB" id="1667936at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007404">
        <property type="entry name" value="YdjM-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04307">
        <property type="entry name" value="YdjM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="20085" checksum="2CE69568BB874CD8" modified="2011-01-11" version="1">MKYPAHVVGGLTFGIAAHQYILQHLPIMKSGEFSTLMFPALFISGSLFGSLLPDIDHRGSYLGRRLPLLSRLANATMGHRGATHAPFVTVTLTTICALGIHYLLLGTIQWFALTLLAGITTGSLSHIFLDALTKSGIPLLYPLSNRHFRLASMKTGGIGEIIITFLMMFLIVCMCAGNIAQLFKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL05</accession>
    <name>E3EL05_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385981.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59567">
        <property type="protein sequence ID" value="ADO59567"/>
        <property type="gene ID" value="PPSC2_27260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5769"/>
    <dbReference type="eggNOG" id="ENOG50307NF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_193688_0_0_9"/>
    <dbReference type="OrthoDB" id="2078837at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="9437" checksum="4AD44491E05EC9D0" modified="2011-01-11" version="1">MKELELMLLNMWSECGIEEIYKYKNRIKAFKEPLLNIELFYDLTYRLFSDVEDIANHEDSCPKNYKLSVNALIQSRSRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL25</accession>
    <name>E3EL25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386001.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0194"/>
    <dbReference type="EnsemblBacteria" id="ADO59587">
        <property type="protein sequence ID" value="ADO59587"/>
        <property type="gene ID" value="PPSC2_27175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5748"/>
    <dbReference type="HOGENOM" id="CLU_1509182_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="62"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="21076" checksum="0D6043E3269E765A" modified="2011-01-11" version="1">MTRFIDMDKLLHWLKGKIASNSEPYNDFRYERAIAYEDLMSEVNSGSFAPDSPQQPDIQMEKRNWQKCLEREKERADSAEADFQTLSDSYDELKKEKDFWESKRTEHKKRADRAESLIQQRNSEIERLKHIISSMARTEHELWEEPASAAECMMTWLNKAYDVQPEYSTRLQDEGDAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL77</accession>
    <name>E3EL77_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386323.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0520"/>
    <dbReference type="EnsemblBacteria" id="ADO59909">
        <property type="protein sequence ID" value="ADO59909"/>
        <property type="gene ID" value="PPSC2_28620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6074"/>
    <dbReference type="eggNOG" id="ENOG5034962">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_182248_0_0_9"/>
    <dbReference type="OrthoDB" id="2045785at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="98" mass="11200" checksum="7D21DC86F24F9A9D" modified="2011-01-11" version="1">MKVVKTGNMKDGTAIQIEDWSEDYSFHNKADVLASYPKSKMTHEGTYAPKAGERYRFSFWLGSAGETESAFNVLTEGRKTLSDFKKYMHGKLEYQDCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELB2</accession>
    <name>E3ELB2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF2726 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0555"/>
    <dbReference type="EnsemblBacteria" id="ADO59944">
        <property type="protein sequence ID" value="ADO59944"/>
        <property type="gene ID" value="PPSC2_28460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6037"/>
    <dbReference type="eggNOG" id="COG0551">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_353320_0_0_9"/>
    <dbReference type="OrthoDB" id="412520at1239"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024402">
        <property type="entry name" value="DUF2726"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10881">
        <property type="entry name" value="DUF2726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2726" evidence="1">
        <location>
            <begin position="571"/>
            <end position="689"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="795" mass="94067" checksum="CD747BD84096C3A8" modified="2011-01-11" version="1">MNETILVANYPQDLILMLTPISRKQYDGDYDEYITHFYSEEHLFPIVDYIVDHLHELLIKPEVKEKGYSWGIDVVYALKKALVNGKHYLLATQKYDIFMSSYIEWKLKPENSALDRYDILFLMLESFAQQKAGGKIDEKLLEIWNNFPKEELINAVIYPVEQVYLFDDSDAHLYIKHEGKNPELYYESPGYLETIEVYFEVLKQLDKAQIGKREYIEHILTFLKIAYDTSQYFLFENKMQITSYIEDLREIVGDSIPTELIDIFQFFIELYMDQEQTLFTIKMNKTQVKAFIRRYNKCFDWCITNEFYMPLETFWNDIYYTTEEDKYYDLVKNVYQRLFKISPNKANKITDGHINLDLLFSNKEYEMIVDFYTQGYLSHDEGRHDFEIAYSLYEMSYYEAAKDMYLKLIEEGNASAAVYNNLGLLYDNIETNDKKAIEYYKLAIDHGSEKAKNNLNILEEKIHKRIERSRQIKDDYFKSTNKYHKKVLFTLYKWGNRPISIEELATATKQSVSYTEKNITDLVHLRMLEVHQDRYNMDPTIEKLIAEFIDPKLERQIIQVDRSNISRPIFFHESEINLYRVLLELFSQQFVFPNISLKTIMDVEKLRENLSSEQLNYLFMAHVDFAVVSTSSYMPILVIEKDSAYHDFDDFQIKDEMKNSIFKLSGIPLIRIRFNSGMTVEKLKQEIRNAIKEMLILTQKGSAKEQKIFDEIDLRNFGISLHSDIDLDVLQGLWDETVGEGVSKKSRIIDLNNGNQLHVSVASELETLIDFSRDQIETKLKSAIPQMKELFITYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELB9</accession>
    <name>E3ELB9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386365.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0562"/>
    <dbReference type="EnsemblBacteria" id="ADO59951">
        <property type="protein sequence ID" value="ADO59951"/>
        <property type="gene ID" value="PPSC2_28430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6030"/>
    <dbReference type="HOGENOM" id="CLU_1325284_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="31"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="24373" checksum="9D88A62D15932B4B" modified="2011-01-11" version="1">MLQDFQGTDEIVSYTKDLMERENGKYALARIFGMAKRYEEEQNKKNEIEKELTLSIGEHVIDTTIVNDDIAIVEVQRKQKEGIWVYFQPVIHGRRYHEVSDTFDYALILALGKKYDVSSFAPQAICNILQMDEYEKKNRQKTFIERVRSGEAKICQLDEAIEEWQESKSQIMELHEYLGLSIYEYQEAILYNKSDVLQKIIDLQKNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELF0</accession>
    <name>E3ELF0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386396.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59982">
        <property type="protein sequence ID" value="ADO59982"/>
        <property type="gene ID" value="PPSC2_28275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5995"/>
    <dbReference type="HOGENOM" id="CLU_2667682_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8741" checksum="1658C10886C41BFB" modified="2011-01-11" version="1">MIITMTRYKRCELEAAVKEKEAQGWVCIGEGIVEIGTEKKIWSFEDRGRSKYYGRTGQNKFVVKMKAPEERKRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC18</accession>
    <name>A0A0D5ZC18_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_03240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="AKA44183"/>
        <property type="gene ID" value="PPSC2_03240"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.625"/>
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    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="16214" checksum="363D72AC022CBEB0" modified="2015-05-27" version="1">MHYNNEDMLINYDFYGLHELDSDNFLTNYDTAQLHNKSKSFESFPVGEIRANALNQRLDRCNRLFRIMHLDGQVRFMVEQTVDDVYGIPSVRIDDFRVERGELVAHEPINRSSFSRPVMGIRIYVKRRNSNLDGNSII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCB5</accession>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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            <taxon>Paenibacillus</taxon>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44380">
        <property type="protein sequence ID" value="AKA44380"/>
        <property type="gene ID" value="PPSC2_27440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5808"/>
    <dbReference type="HOGENOM" id="CLU_2480464_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
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        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="87" mass="9839" checksum="BFAF5700486967F2" modified="2015-05-27" version="1">MWVNIACLFVYVISIFVMIKGLSILGKTGGLHLRKKGIHQTRIGIVGWLVSTIMLSVRISLWFLVPFIAALIICVILYMIDTRGRYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCG3</accession>
    <name>A0A0D5ZCG3_PAEPS</name>
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            <fullName evidence="2">Uncharacterized protein</fullName>
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    </protein>
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        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_10010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2108"/>
    <dbReference type="HOGENOM" id="CLU_169649_0_0_9"/>
    <dbReference type="OrthoDB" id="2075911at2"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="1"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="11905" checksum="09D932A4D05EE624" modified="2015-05-27" version="1">MSLKAVELQIAVPRTSEAGKYHSESQQRPMNDQALLGQKTALETENTRQRSGAIDQSAETFVGERQTGEQSRDSSQQSRSRSDETELPKEHPAEHPYKGHHIDFSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCK6</accession>
    <name>A0A0D5ZCK6_PAEPS</name>
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            <fullName evidence="2">Uncharacterized protein</fullName>
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    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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        <property type="gene ID" value="PPSC2_16100"/>
    </dbReference>
    <dbReference type="GeneID" id="66576755"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3440"/>
    <dbReference type="HOGENOM" id="CLU_2168476_0_0_9"/>
    <dbReference type="OrthoDB" id="1964178at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5002300484" evidence="1">
        <location>
            <begin position="28"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="11506" checksum="4D187A1D17BB35F1" modified="2015-05-27" version="1">MNTKKILLSTAMSLGLLGSIIVPSASASVGPSPVITPIVEVNGVYYRTATLPRNYSYALSNYPGDTYKVASGNVTVSASGVVTTTTATNARVEIYAGNGKLRMVYTVKVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCL7</accession>
    <name>A0A0D5ZCL7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_25205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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        <property type="protein sequence ID" value="AKA44329"/>
        <property type="gene ID" value="PPSC2_25205"/>
    </dbReference>
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    <dbReference type="eggNOG" id="ENOG503054S">
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    <dbReference type="OrthoDB" id="2023318at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="18395" checksum="5853E1A1300F786D" modified="2015-05-27" version="1">MAQSKEMRARAKKFQGRPVCVTLHNGETYVGYITDVNRGGLVLASAGAPPRASSGKQDSRSLKRRAGAHAPGIRLGNRRSGARKPSGRSRSRKPDAKVSAFLPMMGSLFGGLGGLGGATAGAGGLGGMLGGGLRLFGMIQKFVPVVKMGYGMIKSIRPFLGAVKGLMPSASPTTPNNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCY2</accession>
    <name>A0A0D5ZCY2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27520</name>
    </gene>
    <organism evidence="2 3">
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        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886163.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0121"/>
    <dbReference type="EnsemblBacteria" id="AKA44382">
        <property type="protein sequence ID" value="AKA44382"/>
        <property type="gene ID" value="PPSC2_27520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5825"/>
    <dbReference type="eggNOG" id="COG3815">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_154418_1_0_9"/>
    <dbReference type="OrthoDB" id="2013925at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019206">
        <property type="entry name" value="DUF2085_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09858">
        <property type="entry name" value="DUF2085"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="12224" checksum="C4CF1E583C407717" modified="2015-05-27" version="1">MRWIPCHRRPDRSLHIHGKPMMLCARCTSVLLGYAISPIMVGFHIKTSYFWIVVLLLPLLIDGYTQLWKWRKSNNVLRLLTGFSFGIGQALLISNIVWFLVEILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E473</accession>
    <name>E3E473_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Beta-lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12410</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371217.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2644"/>
    <dbReference type="EnsemblBacteria" id="ADO56613">
        <property type="protein sequence ID" value="ADO56613"/>
        <property type="gene ID" value="PPSC2_12410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2632"/>
    <dbReference type="eggNOG" id="COG1680">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012124_0_0_9"/>
    <dbReference type="OMA" id="TMADERY"/>
    <dbReference type="OrthoDB" id="537440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168148" evidence="1">
        <location>
            <begin position="24"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-lactamase" evidence="2">
        <location>
            <begin position="35"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="680" mass="74665" checksum="1A54D3E16328332E" modified="2011-01-11" version="1">MKKIIAVFISAMLFVLPMTNAFAQDNPKPIKEKARNLASELVSKYGVSGVQYAIMDHGNIVLSDSVGVKNKATNEPITNDTMFGIGSTSKMFVSAATMMLVDAHKVDIDQPLTTYIKDFTMADERYKKITPRMLLNHSSGLYGAHYKNSMLFNDNDTENHDELLLRLQSETLKSNPGEYSVYSNDSFQLLEILVERVSGLSYTEFLAKHVSAPLGLNSTKTPLDQFDRQKLSKTYFPAIEGALPVENANVIGTGGLYSTAEELTQFAEVLTGNRTDILSEQSAKSMQSHEYRKGIWVSEETNSFNYGLGWDAVRLAPFSDYGITALSKGGDTVLYHSVLITLPEHHISMAVLSSGGSSILDSIFASNVLLEHLKDKGIIKDILPDKRFEPPVKVEMPSDLLSYSGLYGTVGTTINVEIKNGEFELPAFLDGLVPAQKYVYSGNGAFKSSDGSVAISFEKQKNGKTYIKANFYLNFPGLGQMVMVNYEYQKLDANPLNTTVKKAWEHRNGKNYYALDEKISSIFYLAPSFITKKISVYHEGYANGTKIVDENKAVNAVEIPVMSGRDAFDLNFTTKDGSEYLTIDGQSYISEDAIKPILGGKSQYTIPSNGQAIWFKIDKNVAHKTMTVDVPTSGGFAVYDENGAVVDFSTASHNNSVVLPQGGLIVLGGQAGDGFKININ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E492</accession>
    <name>E3E492_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tautomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yodA</name>
        <name evidence="2" type="ORF">PPSC2_12510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 4-oxalocrotonate tautomerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371236.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2663"/>
    <dbReference type="EnsemblBacteria" id="ADO56632">
        <property type="protein sequence ID" value="ADO56632"/>
        <property type="gene ID" value="PPSC2_12510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2652"/>
    <dbReference type="eggNOG" id="COG1942">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_148073_0_0_9"/>
    <dbReference type="OMA" id="ARFVLFH"/>
    <dbReference type="OrthoDB" id="2013680at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.429.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037479">
        <property type="entry name" value="Tauto_MSAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014347">
        <property type="entry name" value="Tautomerase/MIF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38460">
        <property type="entry name" value="PTHR38460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14552">
        <property type="entry name" value="Tautomerase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55331">
        <property type="entry name" value="SSF55331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="14674" checksum="F3468DF403CE3011" modified="2011-01-11" version="1">MPLLRFDLIKGRDKASLKKLLDVAHQVVVEAFDVPERDRYQIVHEHPADHMIIEDTGLGFNRTDSLVILSIISKARPKEKKQKLYSLLAERLEAECGIAPTDLMVSIVENNDDDWSFGLGEAQFLTGKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4H0</accession>
    <name>E3E4H0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371472.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2904"/>
    <dbReference type="EnsemblBacteria" id="ADO56869">
        <property type="protein sequence ID" value="ADO56869"/>
        <property type="gene ID" value="PPSC2_13620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2898"/>
    <dbReference type="eggNOG" id="ENOG50305Y7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1925510_0_0_9"/>
    <dbReference type="OMA" id="MSDHASS"/>
    <dbReference type="OrthoDB" id="1781772at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="14427" checksum="D495B558C5CE71FA" modified="2011-01-11" version="1">MSDHASSMLWLGVSVILFITACAAAANLSSQLGSALELRSQREEQSEGRISRTIEVETPQRIKGTQVIQTIRMNLQEGISVQVDGLEYDVYSEPFEPDVSTLDASSIYAIYPQRNGNGDITSVRFEKLGED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4I9</accession>
    <name>E3E4I9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Haloacid dehalogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ysaA</name>
        <name evidence="1" type="ORF">PPSC2_13710</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56888.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599879.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01400"/>
    <dbReference type="EnsemblBacteria" id="ADO56888">
        <property type="protein sequence ID" value="ADO56888"/>
        <property type="gene ID" value="PPSC2_13710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2917"/>
    <dbReference type="eggNOG" id="COG1011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_8_1_9"/>
    <dbReference type="OrthoDB" id="1204073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036424">
        <property type="term" value="F:L-phosphoserine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016311">
        <property type="term" value="P:dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006564">
        <property type="term" value="P:L-serine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02240">
        <property type="entry name" value="PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044266">
        <property type="entry name" value="PSP_YsaA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56888.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="33144" checksum="2302E21920B53D82" modified="2015-05-27" version="2">MLNMGTHNDLIRDQTDNLTYTVEREWIIHMTIQAIMFDLDDTLLWDERSVEEAFDAACQTGSRETGADPKTLEEAVRKEARALYESYETFSFTQMIGINPFEGLWANFTAGEQPEFRQLEQLAPAYRKESWRRGLQQLGIDNEELAEKLAAQFASERRARPHVYEETFEILEQLKGQYKLLLLTNGSPDLQQEKLDGVPQLAPFFDHVVISGSFGRGKPDPSIFQHALGLLGIEPGQALMVGDKLTTDIQGALAAGVHSVWVNRNAKTNTTEIKPKFQIKHLSELHGIIQSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X6</accession>
    <name>E3E4X6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_15090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371777.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02710"/>
    <dbReference type="EnsemblBacteria" id="ADO57184">
        <property type="protein sequence ID" value="ADO57184"/>
        <property type="gene ID" value="PPSC2_15090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3221"/>
    <dbReference type="eggNOG" id="COG5547">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_192686_1_0_9"/>
    <dbReference type="OMA" id="MPWKEIW"/>
    <dbReference type="OrthoDB" id="2051990at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018730">
        <property type="entry name" value="DUF2273"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10031">
        <property type="entry name" value="DUF2273"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="9269" checksum="32EE6E741A3342C7" modified="2011-01-11" version="1">MPWKEIWGSYKGRIMGITAGIFFGFIYLWAGFWNMLFFALMVFIGYTLGRRSDSALGSFLPWKEWSEWLSQRWRPFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F0</accession>
    <name>E3E5F0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Molybdopterin biosynthesis protein MoaE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372250.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04705"/>
    <dbReference type="EnsemblBacteria" id="ADO57669">
        <property type="protein sequence ID" value="ADO57669"/>
        <property type="gene ID" value="PPSC2_17365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3710"/>
    <dbReference type="eggNOG" id="COG1977">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114601_4_1_9"/>
    <dbReference type="OMA" id="PTEQETM"/>
    <dbReference type="OrthoDB" id="1995573at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016155">
        <property type="entry name" value="Mopterin_synth/thiamin_S_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003749">
        <property type="entry name" value="ThiS/MoaD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02597">
        <property type="entry name" value="ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54285">
        <property type="entry name" value="SSF54285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="82" mass="8821" checksum="299A759808A465BC" modified="2011-01-11" version="1">MNYHIQVFAGLAELMGKPMITVSADQETMTVSELKDLLSKYFPEAAAQLQGAFVARNQAYAAPEDLVSIHDEIAIIPPVSGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5H0</accession>
    <name>E3E5H0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/putrescine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potB</name>
        <name evidence="7" type="ORF">PPSC2_17460</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372270.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04800"/>
    <dbReference type="EnsemblBacteria" id="ADO57689">
        <property type="protein sequence ID" value="ADO57689"/>
        <property type="gene ID" value="PPSC2_17460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3730"/>
    <dbReference type="eggNOG" id="COG1176">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_18_3_9"/>
    <dbReference type="OMA" id="YPIAYGM"/>
    <dbReference type="OrthoDB" id="1488093at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="61"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="90"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="198"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="238"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="57"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="30215" checksum="56F4E4085261A0BF" modified="2011-01-11" version="1">MSGNTRAAYLLPYYLWIVLFVAAPVVLVFYYSLFDVDGHLTFSNYAQFLTPVYLSMTLSSFWYAFLITVFSLLVAYPAAYLLTRTKHKQLWLLLIILPTWINLLLKTYAFIGIFGTYGPVNAVLGMVGLGGQQILFTSSSFVFVSVYIFVPFMILPIYNALEGLNPSLLDAARDLGASKWTAFRRVIFPLTLSGVRSGCMAVFIPALSLFMITRLIAGNRVITLGTAIEQHFLVTQDWGMGSTVAVFLILAMAIIMLLTSRTKRRVRHGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5I9</accession>
    <name>E3E5I9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Protein export chaperone secb</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372289.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3754"/>
    <dbReference type="EnsemblBacteria" id="ADO57708">
        <property type="protein sequence ID" value="ADO57708"/>
        <property type="gene ID" value="PPSC2_17550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3750"/>
    <dbReference type="eggNOG" id="ENOG50335TD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_139740_0_0_9"/>
    <dbReference type="OrthoDB" id="2007025at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16441" checksum="9DB47BFB0E114DE3" modified="2011-01-11" version="1">MNYDEVANEVFFKDGSLRDIYILDTDIQIWAIIFEYLESNEINYRVTIDGLITKIRDIAELLRIKREASIGVTIEYNEIDICGYLYEGSVIEFDISPIQIDSEKKIDVLMNLLKDLSRKLNKTIIITPEMTMEEVLVRVEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5P0</accession>
    <name>E3E5P0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cellulase</fullName>
            <ecNumber evidence="2">3.2.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">celA3</name>
        <name evidence="9" type="ORF">PPSC2_18500</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372496.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E5P0"/>
    <dbReference type="STRING" id="1406.LK13_05715"/>
    <dbReference type="CAZy" id="GH5">
        <property type="family name" value="Glycoside Hydrolase Family 5"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57917">
        <property type="protein sequence ID" value="ADO57917"/>
        <property type="gene ID" value="PPSC2_18500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3965"/>
    <dbReference type="eggNOG" id="COG2730">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020735_0_0_9"/>
    <dbReference type="OMA" id="GLWVRNW"/>
    <dbReference type="OrthoDB" id="1395441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018087">
        <property type="entry name" value="Glyco_hydro_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00659">
        <property type="entry name" value="GLYCOSYL_HYDROL_F5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="4 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168841" description="Cellulase" evidence="7">
        <location>
            <begin position="33"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="domain" description="Cellulase" evidence="8">
        <location>
            <begin position="47"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="397" mass="44468" checksum="59D114E04E13DFA0" modified="2011-01-11" version="1">MKKKGLKKTFFVIASLVMGFTLYGYTPPSADAASVKGYYHTQGNKIVDESGKEAAFNGLNWFGLETPNYTLHGLWSRSMDDMLDQVKKEGYNLIRLPYSNQLLDSSSRPDSIDYYKNPDLVGLTPIQIMDKLIEKAGQRGIQIILDRHRPGSGGQSELWYTSQYPESRWISDWKMLAERYKNNPTVIGADLHNEPHGQASWGTGDVSTDWRLAAQRAGNAILSVNPNWLILVEGVDHNVQGNNSQYWWGGNLTGVANYPVVLDVPNRVVYSPHDYGPGVSSQPWFNDSTFPSNLPAIWDQTWGYISKQNIAPVLVGEFGGRNVDSSSAEGKWQNALVDYIGANNLYFTYWSLNPNSGDTGGLLLDDWVTWNRPKQDMLSRIMKPVNFIAEQVKASAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5T1</accession>
    <name>E3E5T1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Endoglucanase</fullName>
            <ecNumber evidence="5">3.2.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">bglC5</name>
        <name evidence="9" type="ORF">PPSC2_18675</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372536.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05895"/>
    <dbReference type="CAZy" id="CBM3">
        <property type="family name" value="Carbohydrate-Binding Module Family 3"/>
    </dbReference>
    <dbReference type="CAZy" id="GH5">
        <property type="family name" value="Glycoside Hydrolase Family 5"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57958">
        <property type="protein sequence ID" value="ADO57958"/>
        <property type="gene ID" value="PPSC2_18675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4002"/>
    <dbReference type="eggNOG" id="COG2730">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012932_1_1_9"/>
    <dbReference type="OMA" id="NVMYALH"/>
    <dbReference type="OrthoDB" id="1395441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030248">
        <property type="term" value="F:cellulose binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008965">
        <property type="entry name" value="CBM2/CBM3_carb-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001956">
        <property type="entry name" value="CBM3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036966">
        <property type="entry name" value="CBM3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018087">
        <property type="entry name" value="Glyco_hydro_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00942">
        <property type="entry name" value="CBM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01067">
        <property type="entry name" value="CBM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49384">
        <property type="entry name" value="SSF49384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51172">
        <property type="entry name" value="CBM3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00659">
        <property type="entry name" value="GLYCOSYL_HYDROL_F5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2 5" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="3 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168179" description="Endoglucanase" evidence="7">
        <location>
            <begin position="41"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="domain" description="CBM3" evidence="8">
        <location>
            <begin position="382"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="341"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="343"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="534" mass="58449" checksum="02186AE1B353E71D" modified="2011-01-11" version="1">MMNGQWVLPRIVKRVAVMLTAVLLLTLTNGFNWNAPTAEAAGTTPVERYGQLSVKNGKLVDKNGQPVQLKGISSHGVQWFGDLVNQDTMKWLRDDWGISVFRVALYTEENGYIANPSLKNKVKEAIEAAQKLGLYVIIDWHILSDGDPNTHKNEAKAFFNEFSTKYGHLPNVIYELANEPNGNVNWNNQIRPYASEVSQVIRAKDPDNIIIVGTGTWSQDVHDAADHPLLDKNTMYTVHFYAGTHGQSLRDRIDYALNKGVGIFATEWGTSDASGNGGPFLNESKVWTDFMASRKISWANWSLSDKNETSAALLPGADRKGGWPDSQLTASGKFVKQAILEGSSNHGGGSNGGNSGGDGNNGSNNNGGNNGGDHSGSTPGGNNEGIVLQYRTDDTNAKDNAIRPQFNIKNTGKTAVKLSDLKIRYYYTDESKQAQQFFVDWAKIGNEKVKATFVTLPNPKSKADKYVEISFTDGAGTIQPGGETGEIQSRIHAANWSNFDETNDYSYGAAQTVFADWDHGTVYQQGKLVWGIEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5U4</accession>
    <name>E3E5U4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphomethylpyrimidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">thiD1</name>
        <name evidence="3" type="ORF">PPSC2_19710</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ThiD family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372735.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06930"/>
    <dbReference type="EnsemblBacteria" id="ADO58163">
        <property type="protein sequence ID" value="ADO58163"/>
        <property type="gene ID" value="PPSC2_19710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4202"/>
    <dbReference type="eggNOG" id="COG0351">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020520_0_0_9"/>
    <dbReference type="OMA" id="LWSAEMI"/>
    <dbReference type="OrthoDB" id="461201at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008972">
        <property type="term" value="F:phosphomethylpyrimidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01169">
        <property type="entry name" value="HMPP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045029">
        <property type="entry name" value="HMP/HMP-P_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004399">
        <property type="entry name" value="HMP/HMP-P_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013749">
        <property type="entry name" value="PM/HMP-P_kinase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20858">
        <property type="entry name" value="PTHR20858"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08543">
        <property type="entry name" value="Phos_pyr_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00097">
        <property type="entry name" value="HMP-P_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phos_pyr_kin" evidence="2">
        <location>
            <begin position="16"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="29316" checksum="2B1069BD9164A7EB" modified="2011-01-11" version="1">MRDVHVPRALTIAGSDSGGGAGIQADLKTFQELGVYGMSAITAITVQNTLGVHGVYPLPQEATAQQIEAVGSDLGVDALKTGMLFDAGIIRLVAEQIRKFGWEKVVVDPVMIAKGGAKLLQPEAVQALNDDLLPLALVVTPNIPEAEALTGISIRTIKDRREAARHISSLGPKFVVIKGGHDEESENSGQVVDLLFDGTAFTELGGKRVRTVHTHGTGCTFSAAITAELGKGVSVPEAILNGRAFIQAAIEDTLYLGQGHGPTNHWAYRRRQEILQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5U8</accession>
    <name>E3E5U8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR7</name>
        <name evidence="6" type="ORF">PPSC2_19730</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372739.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06950"/>
    <dbReference type="EnsemblBacteria" id="ADO58167">
        <property type="protein sequence ID" value="ADO58167"/>
        <property type="gene ID" value="PPSC2_19730"/>
    </dbReference>
    <dbReference type="GeneID" id="66576118"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4206"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_0_9"/>
    <dbReference type="OMA" id="YVLNGPA"/>
    <dbReference type="OrthoDB" id="664909at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="36733" checksum="58882AD7636B685C" modified="2011-01-11" version="1">MANIHEIAKLAGVSSATVSRVINNHPYVSEPTRQRVQEVIDRLDYVPNLNAVSLKKGMTKLIGIISISFNDSLGSFVRGFTTYAQEHGFNMALFITNGEKERELEALEMLRRKQLDALVCMIRVNEWSVIEHYTKYGPIVTWQRVNIDAIPSVFMDQYQGYMLALEHLYARGYRSIVNVYGNMRGLNTKERIRAYHDFCKKYDLNADAFPHFYDLNSMEAGEQIAHWWSEQPNKPDAFACSTDYLAAGLLTEARRLGVSVPSDVAVVGFDNIEISHLLDLTTIHYPIDKQAENAFIMIRNALEGLHEELHPLEFKLVERATT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L5</accession>
    <name>E3E6L5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endospore coat-associated protein yheD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yheD7</name>
        <name evidence="1" type="ORF">PPSC2_20220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372847.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07475"/>
    <dbReference type="EnsemblBacteria" id="ADO58275">
        <property type="protein sequence ID" value="ADO58275"/>
        <property type="gene ID" value="PPSC2_20220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4309"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_0_0_9"/>
    <dbReference type="OMA" id="DHIHAIL"/>
    <dbReference type="OrthoDB" id="1230237at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="375" mass="42523" checksum="EDD9A4922702B98A" modified="2011-01-11" version="1">MLHVGVMLNPATYRGIPVMRTRYESIANYEEAGLSYELIPCFLRLKDIHISTGTCRAFVKNGNEYRQMTLPLPPVIHNRTLYRQNENARDINRLVHKGFYIFNEQNRFGKDHIHAILQEDPLLHPHLPKTLQGNLSSIRTLMEQTGDVVIKPSSSSIGRGIMRLRHSSGSWTLQCAHPTISERWSTLRLKVGELPLFLHKRLMHVPHIVQETIPLALCDSRPFDIRVTVQRGYGGIWGVTGMFAKIAPSHTFVSNVAQGGTACSLPEVLSRTETVQNSNIARLMNELERLSLQIVHRLAQHLPRLADVGLDLGITHEGKIVFIECNGRDQRYGFSQAGMSNVWKETYAQPMAYARWLLERMSSSGTERSPGRPLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6P7</accession>
    <name>E3E6P7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">UvrABC system protein C</fullName>
            <shortName evidence="6">Protein UvrC</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Excinuclease ABC subunit C</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">uvrC</name>
        <name evidence="12" type="synonym">uvrC1</name>
        <name evidence="12" type="ORF">PPSC2_20350</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Interacts with UvrB in an incision complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the UvrC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372879.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07605"/>
    <dbReference type="EnsemblBacteria" id="ADO58307">
        <property type="protein sequence ID" value="ADO58307"/>
        <property type="gene ID" value="PPSC2_20350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4340"/>
    <dbReference type="eggNOG" id="COG0322">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014841_3_2_9"/>
    <dbReference type="OMA" id="HIECFDN"/>
    <dbReference type="OrthoDB" id="1036075at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009381">
        <property type="term" value="F:excinuclease ABC activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00203">
        <property type="entry name" value="UvrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001943">
        <property type="entry name" value="UVR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036876">
        <property type="entry name" value="UVR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004791">
        <property type="entry name" value="UvrC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001162">
        <property type="entry name" value="UvrC_RNase_H_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038476">
        <property type="entry name" value="UvrC_RNase_H_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01541">
        <property type="entry name" value="GIY-YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08459">
        <property type="entry name" value="UvrC_HhH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00465">
        <property type="entry name" value="GIYc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46600">
        <property type="entry name" value="SSF46600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00194">
        <property type="entry name" value="uvrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50164">
        <property type="entry name" value="GIY_YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50165">
        <property type="entry name" value="UVRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3 6" id="KW-0228">DNA excision</keyword>
    <keyword evidence="5 6" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4 6" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="GIY-YIG" evidence="10">
        <location>
            <begin position="27"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="UVR" evidence="9">
        <location>
            <begin position="209"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="UVRC" evidence="11">
        <location>
            <begin position="260"/>
            <end position="569"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="344"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="205"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="344"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="386"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="696" mass="79157" checksum="15C440E5FF98F7A3" modified="2011-01-11" version="1">MKSYAEDLQNQEKALENIRHKLALLPDASGCYLMKNSEGTIIYVGKAKVLKNRVRSYFTGSHNGKTQRLVADIRDFEYIVTGSNMEALILECNLIKKHQPRYNVLLKDDKTFPYLKITNEAHPKLEVTRRVLKDKAKYFGPYPNSYAAHQTKKLLDRMYPLRKCGVMPKEVCLYYHMHQCLGPCVKEVEKETYDQISQEIGSFLSGGHEEIKKDLQRKMQEAAEELYFERAKELRDQIISIDAMMEKQKITTSDAKDRDVFGFSVDKGWMCVQILYVRKGKMIERHMSTFPFYGEAYSDFMSYVTQYYSDNPAVPQEILLPDSPKLMKAKSADVDQPIATETELYSATTAETTGITDEEAVQTESDRSADPLRVAEARAAYAEGTNQAQVGDQETGETETETETQLSGGLEDPSTAALALAEWLDVKVLVPQRGLKKQMTGMATENARVALDEKFKLIERDEERTSKAASNLGRAIGLDSLHRVEAFDNSNIQGSDPVSAMIVFIDGKPAKKEYRKYKIRSVQGPDDYETMREVIRRRYERVLKENLERPDLIIVDGGRGQIKAATDVLENELGLFIPVCGLVKDAKHRTSQLLMGETFEAVTLARNSEEFYLLQRIQDEVHRFAITFHREQRGKSMVTSQLDSIPGIGEKRRKLLLKHFGSLKKIREASVEDFRPLSIGDKLARQIIAALREEES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-12-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Q9</accession>
    <name>E3E6Q9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sporulation inhibitor sda</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58319">
        <property type="protein sequence ID" value="ADO58319"/>
        <property type="gene ID" value="PPSC2_20400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4352"/>
    <dbReference type="HOGENOM" id="CLU_197451_2_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015064">
        <property type="entry name" value="Sda"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036916">
        <property type="entry name" value="Sda_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08970">
        <property type="entry name" value="Sda"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100985">
        <property type="entry name" value="SSF100985"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="45" mass="5233" checksum="71EBECB86C9C1854" modified="2011-01-11" version="1">MLTDEMLLDSYQMAIELKLECDFIALLLAEIHKRNLEMNTAVVLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R3</accession>
    <name>E3E6R3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_21180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373034.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08410"/>
    <dbReference type="EnsemblBacteria" id="ADO58465">
        <property type="protein sequence ID" value="ADO58465"/>
        <property type="gene ID" value="PPSC2_21180"/>
    </dbReference>
    <dbReference type="GeneID" id="66575827"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4502"/>
    <dbReference type="eggNOG" id="COG4840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_199533_1_0_9"/>
    <dbReference type="OMA" id="FSEEWYD"/>
    <dbReference type="OrthoDB" id="2004942at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009507">
        <property type="entry name" value="UPF0435"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06569">
        <property type="entry name" value="DUF1128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8303" checksum="28C9F69CAC239784" modified="2011-01-11" version="1">MDLSVPSHANIEYMIEGIKTKLRMASGAAMQASAFSLEQYEDIHDVYDMVISKPNLSISEVEAIVSELGRLRKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6V7</accession>
    <name>E3E6V7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yfmI3</name>
        <name evidence="3" type="ORF">PPSC2_21385</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373077.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08610"/>
    <dbReference type="EnsemblBacteria" id="ADO58509">
        <property type="protein sequence ID" value="ADO58509"/>
        <property type="gene ID" value="PPSC2_21385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4546"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034180_1_0_9"/>
    <dbReference type="OMA" id="CYQIRDI"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="168"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="274"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="301"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="331"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="357"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="395"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="421"/>
            <end position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="458" mass="49670" checksum="266DFC61075C3766" modified="2011-01-11" version="1">MHKRSFTYLLGTQTMSNAADILYIMALVSLVFHETDSIFSSVLVPLLRMGAQMISGFLAPLILARFQLPFILFVSQFGQLAYFAILLGHLWSAGTEPMWVIVFALVTAMSFLDGWTTPARNALIPRLASGEGLMRANSLVSVSDQTVQLAGWGLSGVLVAMLGSEKTLLVAGGLYLIALIFTSLIRDPLEGKAHYLLQPGTRVQNGDVLASEVVTEPGQGQHDLPPAQLEDKLYGPESESTAVPPKRKKEILREGWSLIGASHRLKALIFMDMIDLLGGSVWVGAFTLAFAQQVLHKSEAWWGYINAAYFAGAIGGGIIVLACVKHLQRRLLPAMLVGMAGYGLLTAWYALNTLPPLTLLIVLLMGLPAEMSVVSRRTMMQMSVSVHDLPKVLSAQATLTSLTFCISLLLMGWIADHLGIVNLYLFSAVLTMIAVIYGIFSRRALSMSLSAEVATSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W2</accession>
    <name>E3E6W2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pstB9</name>
        <name evidence="5" type="ORF">PPSC2_21405</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373082.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4565"/>
    <dbReference type="EnsemblBacteria" id="ADO58514">
        <property type="protein sequence ID" value="ADO58514"/>
        <property type="gene ID" value="PPSC2_21405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4551"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OrthoDB" id="1926714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="10"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="42"/>
            <end position="49"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="238" mass="27277" checksum="02EBB17A7D1672D1" modified="2011-01-11" version="1">MTQEHKSSFLQLDQVSFSYGSREIIHGLNWDVPDHQITVLLGPNGAGKSTLLSLIAGLHQVQKGTIRFNQTIIDFENQNYKSMVGYLQEFPFYYPALSVSEMMRLIGGLRQVPKDQLEMRIAKWLDRFKLEDYQNIKMEELSQGTKKRVALASMLLHEPRILILDEPTNGLDPDQVMIVRSILREYLTEGRVILLSTHIIGLAEKLADQVAILRNGRITYSGRSTIDLERLYIAHQHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Y1</accession>
    <name>E3E6Y1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Sulfate adenylyltransferase</fullName>
            <ecNumber evidence="7">2.7.7.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">ATP-sulfurylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Sulfate adenylate transferase</fullName>
            <shortName evidence="7">SAT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">sat</name>
        <name evidence="10" type="ORF">PPSC2_22265</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP + H(+) + sulfate = adenosine 5'-phosphosulfate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:18133"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16189"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58243"/>
            <dbReference type="EC" id="2.7.7.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the sulfate adenylyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.4" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373247.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09730"/>
    <dbReference type="EnsemblBacteria" id="ADO58683">
        <property type="protein sequence ID" value="ADO58683"/>
        <property type="gene ID" value="PPSC2_22265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4721"/>
    <dbReference type="eggNOG" id="COG2046">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022950_1_1_9"/>
    <dbReference type="OMA" id="LQHMIIR"/>
    <dbReference type="OrthoDB" id="1574819at2"/>
    <dbReference type="UniPathway" id="UPA00140">
        <property type="reaction ID" value="UER00204"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004781">
        <property type="term" value="F:sulfate adenylyltransferase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070814">
        <property type="term" value="P:hydrogen sulfide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000103">
        <property type="term" value="P:sulfate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00517">
        <property type="entry name" value="ATPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00066">
        <property type="entry name" value="Sulf_adenylyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025980">
        <property type="entry name" value="ATP-Sase_PUA-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020792">
        <property type="entry name" value="SO4_adenylyltransferase_pro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024951">
        <property type="entry name" value="Sulfurylase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002650">
        <property type="entry name" value="Sulphate_adenylyltransferase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01747">
        <property type="entry name" value="ATP-sulfurylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14306">
        <property type="entry name" value="PUA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00339">
        <property type="entry name" value="sopT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PUA_2" evidence="9">
        <location>
            <begin position="5"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-sulfurylase" evidence="8">
        <location>
            <begin position="171"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF14306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="389" mass="43177" checksum="B3864CF6E915F0CF" modified="2011-01-11" version="1">MTAILPHGGTLVDRNIRGPEQEALLQAAGELFPIPVNPWTISDLDLIGVGAFSPLTGFMNESDYRSVVTDMRLADGTVWSIPITLAVVETIASELKLGQQVALVGETDGIIYAVLDIESIYQVDQAEEARCVFKTDDPAHPGVNKLLDRPATYVGGTVQVLNRPEPTQFSEFYYTPAQTRSLFAEKGWKTVVGFQTRNPVHRAHEYIQKSAMEIVDALFLNPLVGETKSDDVPANVRMKSYLVLLDNYYPADRALLGVFPAAMRYAGPREAIFHAIVRKNFGCTHFIVGRDHAGVGDYYGTYEAQEIFKHFTPEELGITPLFFEHSFYCTQCGNMASSKTCPHPKEHHLTLSGTKVRELLRSGVCPPPEFTRPEVAQVLIEGMKEYVHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E773</accession>
    <name>E3E773_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Multidrug resistance protein SMR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ykkC3</name>
        <name evidence="6" type="ORF">PPSC2_23405</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373464.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4989"/>
    <dbReference type="EnsemblBacteria" id="ADO58928">
        <property type="protein sequence ID" value="ADO58928"/>
        <property type="gene ID" value="PPSC2_23405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4955"/>
    <dbReference type="eggNOG" id="COG2076">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133067_1_0_9"/>
    <dbReference type="OMA" id="MNRSWIY"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000390">
        <property type="entry name" value="Small_drug/metabolite_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045324">
        <property type="entry name" value="Small_multidrug_res"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30561">
        <property type="entry name" value="PTHR30561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00893">
        <property type="entry name" value="Multi_Drug_Res"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="5"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12058" checksum="83205F7617BC2121" modified="2011-01-11" version="1">MNRSWIYVFVGGLIEVVWVSGLKHADSVLTWAVTVLAVVASFYLIMKAAKRLPVGTVYAVFTGLGTGGTVVGEMLLFGEPFQWSKTLLIALLLAGVIGLKLVTDRDAQEGSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E780</accession>
    <name>E3E780_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable molybdenum cofactor guanylyltransferase</fullName>
            <shortName evidence="4">MoCo guanylyltransferase</shortName>
            <ecNumber evidence="4">2.7.7.77</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">GTP:molybdopterin guanylyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Mo-MPT guanylyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Molybdopterin guanylyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Molybdopterin-guanine dinucleotide synthase</fullName>
            <shortName evidence="4">MGD synthase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">mobA</name>
        <name evidence="6" type="ORF">PPSC2_23440</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>GTP + H(+) + Mo-molybdopterin = diphosphate + Mo-molybdopterin guanine dinucleotide</text>
            <dbReference type="Rhea" id="RHEA:34243"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
            <dbReference type="ChEBI" id="CHEBI:71310"/>
            <dbReference type="EC" id="2.7.7.77"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="4">The N-terminal domain determines nucleotide recognition and specific binding, while the C-terminal domain determines the specific binding to the target protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MobA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.77" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373471.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10930"/>
    <dbReference type="EnsemblBacteria" id="ADO58935">
        <property type="protein sequence ID" value="ADO58935"/>
        <property type="gene ID" value="PPSC2_23440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4962"/>
    <dbReference type="eggNOG" id="COG0746">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055597_2_1_9"/>
    <dbReference type="OMA" id="HENGYIE"/>
    <dbReference type="OrthoDB" id="2019898at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061603">
        <property type="term" value="F:molybdenum cofactor guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02503">
        <property type="entry name" value="MobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00316">
        <property type="entry name" value="MobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025877">
        <property type="entry name" value="MobA-like_NTP_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013482">
        <property type="entry name" value="Molybde_CF_guanTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12804">
        <property type="entry name" value="NTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 4" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="1 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transf_3" evidence="5">
        <location>
            <begin position="5"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="8"/>
            <end position="10"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="209" mass="23205" checksum="06AF5F1CB0C87252" modified="2011-01-11" version="1">MEVTGIIIAGGRSSRMGQDKALLEIEGATMLERTYITLQQATQRVIVVTRDDQGYEQDSMEAVSDIYPGMGPLSGIHAGLSASTTEWGIVVACDMPFVQLEVLQALLVLTEKWAASKGAAESPLQAVIASVAGRMHPLLGVYHRSVLPSAEERLRNKRLRLTEWLETLNVRYATIADMPGVTENIWHNAVFNMNNPQDYKFVLEQFRKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E790</accession>
    <name>E3E790_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Formate/nitrite transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yrhG</name>
        <name evidence="6" type="ORF">PPSC2_23480</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373481.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10970"/>
    <dbReference type="EnsemblBacteria" id="ADO58945">
        <property type="protein sequence ID" value="ADO58945"/>
        <property type="gene ID" value="PPSC2_23480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4971"/>
    <dbReference type="eggNOG" id="COG2116">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036896_1_1_9"/>
    <dbReference type="OMA" id="MIWFPIM"/>
    <dbReference type="OrthoDB" id="1834167at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023271">
        <property type="entry name" value="Aquaporin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000292">
        <property type="entry name" value="For/NO2_transpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30520">
        <property type="entry name" value="PTHR30520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01226">
        <property type="entry name" value="Form_Nir_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00790">
        <property type="entry name" value="fnt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="154"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="189"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="229"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="29972" checksum="CC9E27190C400FBF" modified="2011-01-11" version="1">MASYKPGQIAEKTVETGVAKANNPWTVAVVLGFLAGAFIALGFLLDIRVIASAPKEWGSIATFIGAAVFPVGLVLVLIAGGELLTGNMMAVPLARWAGRIKTGAMLRNLAIITLSNFAGALFVAFFFGHVLGLTETGPYLDKVVDMAGHKLHESFLQSFISGIGCNWLVALAVWMAYSTDSIGGKIMGIWFPTMAFVAIGFQHVVANMFLIPAAIFAGHFSWAEYVMNFIPVWLGNLVGGSLFVAGAYWLAYLKKTQTNTHSVNESQITPSVASNPLSDHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C0</accession>
    <name>E3E7C0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373511.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11130"/>
    <dbReference type="EnsemblBacteria" id="ADO58975">
        <property type="protein sequence ID" value="ADO58975"/>
        <property type="gene ID" value="PPSC2_23625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5001"/>
    <dbReference type="eggNOG" id="ENOG502ZQM0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1479391_0_0_9"/>
    <dbReference type="OMA" id="TTPYGRG"/>
    <dbReference type="OrthoDB" id="1457938at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="190" mass="22219" checksum="19EB2B5BF6C95D51" modified="2011-01-11" version="1">MDTHKMNTALMNTLEITDVPWHRLTTPYGRGTDLPHLIFNGEYAAIADLIEHQGTLWQVTPWALLFLLRNMHARRPEDITLSELELYHTVVQALDIENLQADSQESVESLTMLLDEKYLWPADSDPEEDELEWEEEEARGYDPVAFWSYYDWSCRLLKQALPDFESLLQRYADSEIAESLSELVQQLQKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7D6</accession>
    <name>E3E7D6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Phosphate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yjkB</name>
        <name evidence="5" type="ORF">PPSC2_24420</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373681.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11910"/>
    <dbReference type="EnsemblBacteria" id="ADO59147">
        <property type="protein sequence ID" value="ADO59147"/>
        <property type="gene ID" value="PPSC2_24420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5171"/>
    <dbReference type="eggNOG" id="COG1117">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="PALWVTH"/>
    <dbReference type="OrthoDB" id="1200451at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035435">
        <property type="term" value="P:phosphate ion transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03260">
        <property type="entry name" value="ABC_PstB_phosphate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005670">
        <property type="entry name" value="Phosp_transpt1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43423">
        <property type="entry name" value="PTHR43423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="9"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="27428" checksum="0E7FDB6207A60E0F" modified="2011-01-11" version="1">MEPNPLPAIEFNRVTKYFTGSGQQRAVLNGVTAKVPRGKITTLVGPSGSGKSTLLSLCNLLLASDEGEINVLGKPITEWEIPELRRKVALVFQDAPMLQGTVLYNLQTVERLHGTVLEDPVGLLERVGLTRDLLEQKAQELSGGQRQRLALARTLANRPDILLLDEITSALDPTSVKEVEELLLQMNKEEGTTMIWITHHMEQARRVGHETWLMINGSLVEQTDTQTFFNAPQHSETRRFVAGEWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7S3</accession>
    <name>E3E7S3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ytlD3</name>
        <name evidence="7" type="ORF">PPSC2_14010</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371556.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01665"/>
    <dbReference type="EnsemblBacteria" id="ADO56956">
        <property type="protein sequence ID" value="ADO56956"/>
        <property type="gene ID" value="PPSC2_14010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2992"/>
    <dbReference type="eggNOG" id="COG0600">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046113_2_2_9"/>
    <dbReference type="OMA" id="LRWHPGY"/>
    <dbReference type="OrthoDB" id="916788at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="213"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="242"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="83"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="30983" checksum="2302C7CB0397D5A7" modified="2011-01-11" version="1">MKNEADQPEQRWIQGLHQTYLRNRRMQQWLVTGVQIAILLLLFVLWEIAGRLKWIDVLLFSYPSKIFTQIGKDAVSGELWGHVGVTVGETMAGFLLGTLLGTLLAVLIWWSPFLSRVLDPYMVVFNSMPKVALGPIFIVMFGAGFTAILMTTLSITVIITTLVVYNSFQEVDPNLVKVVRTFGGTRRDTFQKVILPASFPAIVSTLKVNVGMAWVGVIVGEFLVAKNGLGYLIIYGFQVFNFTLVMSSLLIIAVVATLMYQAVVYVEHRLLSGRPHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="79" xmlns="http://uniprot.org/uniprot">
    <accession>E3E869</accession>
    <name>E3E869_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Bifunctional protein FolD</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="8">Methylenetetrahydrofolate dehydrogenase</fullName>
                <ecNumber evidence="8">1.5.1.5</ecNumber>
            </recommendedName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="8">Methenyltetrahydrofolate cyclohydrolase</fullName>
                <ecNumber evidence="8">3.5.4.9</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="8" type="primary">folD</name>
        <name evidence="11" type="synonym">folD3</name>
        <name evidence="11" type="ORF">PPSC2_15080</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADP(+) = 5,10-methenyltetrahydrofolate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:22812"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>5,10-methenyltetrahydrofolate + H2O = (6S)-10-formyltetrahydrofolate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="EC" id="3.5.4.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.5" evidence="8"/>
    <dbReference type="EC" id="3.5.4.9" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371775.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02700"/>
    <dbReference type="EnsemblBacteria" id="ADO57182">
        <property type="protein sequence ID" value="ADO57182"/>
        <property type="gene ID" value="PPSC2_15080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3218"/>
    <dbReference type="eggNOG" id="COG0190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034045_2_1_9"/>
    <dbReference type="OMA" id="HIVGRPM"/>
    <dbReference type="OrthoDB" id="1449514at2"/>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004477">
        <property type="term" value="F:methenyltetrahydrofolate cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004488">
        <property type="term" value="F:methylenetetrahydrofolate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006164">
        <property type="term" value="P:purine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01080">
        <property type="entry name" value="NAD_bind_m-THF_DH_Cyclohyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01576">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000672">
        <property type="entry name" value="THF_DH/CycHdrlase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020630">
        <property type="entry name" value="THF_DH/CycHdrlase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020867">
        <property type="entry name" value="THF_DH/CycHdrlase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020631">
        <property type="entry name" value="THF_DH/CycHdrlase_NAD-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00763">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02882">
        <property type="entry name" value="THF_DHG_CYH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00085">
        <property type="entry name" value="THFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00767">
        <property type="entry name" value="THF_DHG_CYH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="3 8 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 8" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="4 8" id="KW-0521">NADP</keyword>
    <keyword evidence="1 8" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5 8 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 8" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="THF_DHG_CYH" evidence="9">
        <location>
            <begin position="6"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="THF_DHG_CYH_C" evidence="10">
        <location>
            <begin position="123"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="165"/>
            <end position="167"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="30446" checksum="7352074F83875133" modified="2011-01-11" version="1">MSAPIIDGKQISQDIRASIQQEVIRLKEHSFQPGLAVVLVGEDPASQVYVKNKEKACHDLGYYSEVHRLAADTSQEALLKLVDKLNHQSNIHGILVQLPLPKHIQEKAVIDAIAVEKDVDGFHPVNVGNLVIGDDSLLPCTPAGVIELIKRAGVEIAGKHAVVIGRSNIVGKPVSLLLQRENATVTMCHSRTANMAELSRQADILVVAIGKANFIDASFVKPGAVVIDVGMNRLENGKLAGDVDFESVKQVSGPITPVPGGVGPMTITMLMQNTLVAAKRSYGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E880</accession>
    <name>E3E880_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YlbG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ylbG</name>
        <name evidence="1" type="ORF">PPSC2_15515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57272.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_017427798.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03165"/>
    <dbReference type="EnsemblBacteria" id="ADO57272">
        <property type="protein sequence ID" value="ADO57272"/>
        <property type="gene ID" value="PPSC2_15515"/>
    </dbReference>
    <dbReference type="GeneID" id="66576877"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3314"/>
    <dbReference type="eggNOG" id="COG4471">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_159890_2_0_9"/>
    <dbReference type="OrthoDB" id="1897800at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016979">
        <property type="entry name" value="DUF2129"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09902">
        <property type="entry name" value="DUF2129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031653">
        <property type="entry name" value="UCP031653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57272.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="10559" checksum="AB9E419FD7508475" modified="2015-05-27" version="2">MFAERTGYIIWVSDIKAARNLEKYGNVHYISKRMHYVVIYMNADRAEDTVKNIRRLSYVRKVERSFRNEIRTEYNDDKEKMKEYEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8D3</accession>
    <name>E3E8D3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cheW7</name>
        <name evidence="8" type="ORF">PPSC2_15770</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371911.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03465"/>
    <dbReference type="EnsemblBacteria" id="ADO57325">
        <property type="protein sequence ID" value="ADO57325"/>
        <property type="gene ID" value="PPSC2_15770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3366"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="AQAYIFG"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="227"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="297"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="441"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="587" mass="64203" checksum="1A01A088D9E14FD1" modified="2011-01-11" version="1">MKNLKWSTMSFFGKNLLISFLNIVLIGAILITSSYILQKNILTTQLQDQVKVLTKKWAEDVDKTKVQQALSEKDYNGSAQQEIRKFLDSIHTFYPNVAQAYIFGTELKEGNQTSIIGVPTNLVQAFQNSKMNIGDMYTLPDENADAVNKMLQSNESALSSFYTDEYGTWTTIVYPITDASGKVTSAIYFDVDASSVPTGLHKLLVYGVSLLILFLAIFLTIQYLLVKRTLSPIRSLMKGIEEVSEGNLNVKIKTGLDDLGIINQKFNSMIKRLNDTMVKVQDTTQEVTGSAQELLSISEKNSTNTNIINSNIREITQGLEAQDHAALESSRAMNEMSTVIQTIAESSSSVADQAYSMEKRSVEGNQVAQKLSTQMDSISTTMGSTVDSVNALQNRSNEISNIVSIITGIASQTNLLALNASIEAARVGEEGKGFAVVAGEVRNLAEQSQESAKQIAELIEEIQKEIEQTVKGISLGTQEVQVGLEVTKQTGEMFSEILEASNKVSSQIQEVSSATEQISASTQEMSATSDELSSTVSKTVNSSKQIEQTIGEQTESMASIVQASDKLTSMSGELEELISFFKVNREV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G2</accession>
    <name>E3E8G2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Stage V sporulation protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pbpB</name>
        <name evidence="5" type="ORF">PPSC2_16640</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transpeptidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372096.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3555"/>
    <dbReference type="EnsemblBacteria" id="ADO57511">
        <property type="protein sequence ID" value="ADO57511"/>
        <property type="gene ID" value="PPSC2_16640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3551"/>
    <dbReference type="eggNOG" id="COG0768">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009289_6_0_9"/>
    <dbReference type="OMA" id="EHYDPSM"/>
    <dbReference type="OrthoDB" id="213680at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005543">
        <property type="entry name" value="PASTA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005311">
        <property type="entry name" value="PBP_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036138">
        <property type="entry name" value="PBP_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03793">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03717">
        <property type="entry name" value="PBP_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00740">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56519">
        <property type="entry name" value="SSF56519"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51178">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PASTA" evidence="4">
        <location>
            <begin position="595"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="721"/>
            <end position="767"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="727"/>
            <end position="757"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="784" mass="84983" checksum="82FABA065CB40309" modified="2011-01-11" version="1">MVKRIKLRTLLIGGCITLFFLVLLLKVFWIQVVSGEYWHNLVVTQVEKDQVIQPKRGTIMDRKGNVLAADAPAYTVVVNPSIIQEYDLENEAVAKLHQLLKTPEDELRRHLSAKDKEGNYLKNREIRNGGWKVDPEVKAQVDTFKEYLKDKYGVIGAVDTVQESKRYYPENKLASHVLGYLSKDGKAGMGLEAYYDKELSGTAGKLLYQRDRKGVPLQGSESIYEPAQNGKNLKLTIDDTIQYYIEDAMQQAIATYNPKTMTVVAADPKTMDVLGMASYPNFNPNTYGSASLENFRNNATQSIYEPGSTFKIVTLAAAVQEKVFNPNDRYQSGIIRVGGWDIRDVSRNWGTLTYLEGVKRSSNVGFVHLGLDKLGGEKLKRYIDNFGFGVKTGIDLPSESTGAITFHTQYKSEVATASFGHGRVQVTPIQQVAAISAIANGGKLMKPHLVKEIVNPDTNEVQTIQPKEVRQVISKESADQTSNYLEQVVSDQEIGTGRLAYIDGYRVAGKTGTATKVVGKVYDHSKDVVSFIGFAPVNDPKIAVLVVMDEPNKSVGGGTAAAPVFKKIVSQSLQYMGVPKTGTKSSKSDGAAVKTVNLPTVPQLTGLVKKDAQNALLKQGIAYVTVGKGSKIVRQYPEAGVKMKPGQRIYLLTEDGATMTIPDFTGVSLRDTLQVLTLMKVGVQVTGEGYVASQKTQMVNGKRIVSVTLMPAKETVTGVKLEEAQDSPTGVATNQPGSSTGTATDSKTKTGATADAGTNTVAPKGGISAIADEKSAAAIKGEDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8W6</accession>
    <name>E3E8W6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cobalt transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">czcD</name>
        <name evidence="8" type="ORF">PPSC2_19165</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372639.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06365"/>
    <dbReference type="EnsemblBacteria" id="ADO58064">
        <property type="protein sequence ID" value="ADO58064"/>
        <property type="gene ID" value="PPSC2_19165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4106"/>
    <dbReference type="eggNOG" id="COG0053">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013430_3_6_9"/>
    <dbReference type="OMA" id="GYPYKSN"/>
    <dbReference type="OrthoDB" id="381612at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027470">
        <property type="entry name" value="Cation_efflux_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036837">
        <property type="entry name" value="Cation_efflux_CTD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16916">
        <property type="entry name" value="ZT_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160240">
        <property type="entry name" value="SSF160240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01297">
        <property type="entry name" value="CDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="180"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="ZT_dimer" evidence="7">
        <location>
            <begin position="219"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="34875" checksum="01B4A9B910FDA2A3" modified="2011-01-11" version="1">MNSERSRSLETAALSGIVGNLALAVLKGTVGYAANSKALMGDALHTAADSASRLQEMLFSKGGTDHGMLARLRNGEKVRTVISVVLAILVLMSGLQLGISAVRSLSSSEPQAPGLYALITVLIALVLREALFQFQYRYSIKHGHKAEADRYANHERYSLYASLIALIGMIGAMTGEAMEWPALLYLDPTAALLVACLVLRKGYLMVMNTAYQAPAQPLREEDSQRFMETIQRVYGIVTVEHLHAQETGHFITVDVTISVNPRITVQEAQEIADRAKNLLLARFPQVTHVQMQFISYQAGYPYKSNHELPDNDASSLLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E973</accession>
    <name>E3E973_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Polyketide synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pksJ</name>
        <name evidence="6" type="ORF">PPSC2_15865</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371932.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03560"/>
    <dbReference type="EnsemblBacteria" id="ADO57346">
        <property type="protein sequence ID" value="ADO57346"/>
        <property type="gene ID" value="PPSC2_15865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3387"/>
    <dbReference type="eggNOG" id="COG3321">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4221">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_224819_0_0_9"/>
    <dbReference type="OMA" id="PPTMVFD"/>
    <dbReference type="OrthoDB" id="1123553at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.129.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032821">
        <property type="entry name" value="PKS_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020807">
        <property type="entry name" value="PKS_dehydratase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042104">
        <property type="entry name" value="PKS_dehydratase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013968">
        <property type="entry name" value="PKS_KR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16197">
        <property type="entry name" value="KAsynt_C_assoc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08659">
        <property type="entry name" value="KR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14765">
        <property type="entry name" value="PS-DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Carrier" evidence="5">
        <location>
            <begin position="496"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="5">
        <location>
            <begin position="2007"/>
            <end position="2080"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="5">
        <location>
            <begin position="2117"/>
            <end position="2193"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="5">
        <location>
            <begin position="2230"/>
            <end position="2306"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="4">
        <location>
            <position position="533"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="4">
        <location>
            <position position="2041"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="4">
        <location>
            <position position="2154"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="4">
        <location>
            <position position="2267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="2962" mass="328768" checksum="E09FFE288AD7819A" modified="2011-01-11" version="1">MKDFFQNILGEVKSGRMQKEEAIFRIRQVQAQMASHGTLQSKAGAEAGALANTGILMLEPSWKEQAALQKATLPEFSQHLVVLCELDHISERSIEALLKGTRCIKLHAGQTGMDERFQGYALQLLAEVQMLLKENLRGSVLIQIAASSQSGQQLFAGLLGLLQTAEKENPKIVGQFVELEATGLEEIVEKLKENSQYPKDKRIQYENGKRLVLSWNEMKAPKTPGRVPWKDRGIYLITGGAGGLGLVFARDIARRVQEATLVLVGRSILDEGKQTILEELKVLGARVEYKRADVSRKEEVSQLILKIQEEHGGLDGILHSAGVIQDRFIIHKTQEEFKEVMAPKVAGLVNLDQATKELDLDFFIFFSSIAGIMGNPGQADYAAANAFMDAYALYRNSLVSSKERKGQTLSVNWPLWKDGGMHADAETEMVWQSIGMVAMQTANGVKALYDSLASGQKQVLVIEGDLPRLRKHLLEPQPQEKLYVEETASSPINPELLLEKTLHQLKVLFGEVTKLSIEKIDVSEPLESYGIDSIMITRLNQKLQGVFGEISMTLFFEYQTLEAVAEYFIADYYEECVWWTGLGRRLEPEENFVPASLHTDSELSLPTLPKEENHHASRTVIDTGSVKHEQIAIIGMSGRFPQAKNMEEYWSNLQQGKDCITEIPADRWKREGFYSPNIKEAVEKGKSYSKSGGFVEDFADFDPLFFNISPREAMSMDPQERIFLEECWKTFEDAGYSRDQLAAQYNGRIGVFAGITATGFNLYGPKLWEQGKPIFPRTSFSSVANRISYLLNLKGPSFSVDTMCSSSLTAIHEACEHIHNGECEIAIAGGVNLYLHPSNYVFLSTMRMLSPEGRCKSFGEGGNGFVPGEGAGVVLLKPLSRAIADKDHIYAVIRATSINHGGKTNGYTVPNPVAQVELIRETLDKAGVNARTVSYIEAHGTGTELGDPIEITGLTQAFKKDTQDTGFCAIGSVKSNIGHLEAAAGIAGVAKIILQMKNRKIVPSLHAKELNPNINFAKTPFTVQQGLAEWKRPILEKNGEQREYPRIAGISSFGAGGSNAHIVLEEYIPAEQAVSTPQKPVVIILSAKSDEALKEQAVQLTAAIDKNVFSDNDLVNAAYTLQMGREAMDERLAVVVQSVEELRNKLREFNGGRRDIAQLYRGQAKRDKESLDVAQLEEALDESFDVWNLAEKYGRISELWVKGVHVDWNRLYSDIQPFRISLPTYPFARERYWISVDEEKPAGVAPAYLHPLLHHNTSVLSEQRFSSTFNGQEFYLNSSVVDGRLVLSDGACLEMARAAVEQSLTVQEKGQAGITLTDMVWTHTPVIGDRPEIHIGLFPGDQGGIDFKIYSTRTEAGDPVIYSEGSAELEALSRTETLDIQALQMECIDRISHGGDDEALRTIEVNYGSEFQSAEQVYIGQDLVLAKLSLPSGIANTEGLFVVHPFITSAALQMPLYLLSNNENIMRFTGIDSRKKILPTAIDRLQIFRECPSDMWALVRHGRGNQIDHRAHKFDIDLCDEAGRICVRIKGVSYKEAETCEQPLGAMMLQPFWKEQAVGEETITTDYERHVVILCETDAIAALHVEASLTGAECITLQARMEEVDRRFETYAVQVFEKIQGILINKPKGKVLVQIVMMSGNEKLLFSGLCGLLKTAHKENPKFYGQLIEVGEMEKNERLIEILRSSSRRPEDSRIRFVEGKRWIPAWNKVEMPSIPQIPWKDHGVYLVTGGAKGLGLIFAKEIARQTKDATLILTGRSMLDEDKLAPLEELKALGAKVEYRQVDVTQKEAVVGLIEDIQTAYGGINGILHSAGIIKDNYIIKKTSAEFREVLAPKVAGLAHLDQASKDMPLDFFILFSSAAGVGGNAGQSDYATANAFMDAYAWYRNTLVSSWERMGKTLSINWPLWKEGGMRPDQETEKALQNVGMFAMRTETGISALYQSIACISNQAMVVEGDIELISRMMIMEGQLEESGEAARDQRLGSEDNMVLFSANKVVSVQDEHLLREKTAHYLKTLLSSSIELPAYRIEEDTPLENYGVDSIKSMELTDQLEKTFDQVSKTIFFEYPNIRSLTEYFLESHRDELIALFGLEQAATVGVKAATATAAMVTELRPGEEQLRDQVTSYLKGLLSSSTGLPEQRIEEDKNLENYGVDSIKSMEITDQLEETFGSLSRTLLFEYPNIRSLTEYFLESHRDELSTLFGLDQVATVSAIADTVSVANETKSLSREGRLRDQTTGYLKGLLSSSTGLPEQRIEEDKNLENYGVDSIKSMEITDQLEETFGSLSRTLLFEYPNIQSLTDYFLESHWDELNALFGAEQELVAGASTKSIGIVEHAKAPSPIFRHSPISSVRVEPKEAVTGTGAMDIAVIGVSGKYPGAENIQEFWRNLQEGKDCITEVPEDRWDHDLYFDKERNKPGKTYCKWGGFLNRINPLDSSYFHLTPHEVSLMDPMEQLFLEMIWSLLESAGYTREVLQKKHQSKVGVYVGATYHKYCDCDTNTDAPRITSFGSVAVANPMSHYFNFQGPSISIDTMSSSSAVAVHMACESLIRGECQIAVAGGGNLLTSPKKYIESSQNNLIGSHEDSRSFADGDGYLPAEGVGAVLLKPLHKAEQDGDCILAVIKSTATNHGGHSNGYTVPNPNVQAQLVEENFLKAGIHPRTVSYVEAAANGSTLGDPIELVALKKSFQKFTDEQHFCAMGSVKSNIGHAEAASGISQLTKTILQLWHRKLVPTIKAEKLNPNLTFSNTPFYLQRELQEWKRPVIELEGEAREFPLRATVSSFGAGGSNVHFILEEYIPSPKEAVQLKGADQTEVVVLSDVNWERLKALASQLLEYVEQQNELCLHDVAFTLQTGREAMKCRTAIVASSREELLTGLRELIESVGKGNEPEGASIPIFIGEGGEDSNTSALLLGKVGEKVSQILLEERNLENIAMYWTQGGRITWEALHEGQAVRRIPLPTSPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9B6</accession>
    <name>E3E9B6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pectinesterase</fullName>
            <ecNumber evidence="3">3.1.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">PME2</name>
        <name evidence="5" type="ORF">PPSC2_16055</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[(1-&gt;4)-alpha-D-galacturonosyl methyl ester](n) + n H2O = [(1-&gt;4)-alpha-D-galacturonosyl](n) + n H(+) + n methanol</text>
            <dbReference type="Rhea" id="RHEA:22380"/>
            <dbReference type="Rhea" id="RHEA-COMP:14570"/>
            <dbReference type="Rhea" id="RHEA-COMP:14573"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:140522"/>
            <dbReference type="ChEBI" id="CHEBI:140523"/>
            <dbReference type="EC" id="3.1.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.11" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371975.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03745"/>
    <dbReference type="EnsemblBacteria" id="ADO57389">
        <property type="protein sequence ID" value="ADO57389"/>
        <property type="gene ID" value="PPSC2_16055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3431"/>
    <dbReference type="eggNOG" id="COG4677">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012243_3_1_9"/>
    <dbReference type="OMA" id="NRVAWCR"/>
    <dbReference type="OrthoDB" id="1095798at2"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045330">
        <property type="term" value="F:aspartyl esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030599">
        <property type="term" value="F:pectinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042545">
        <property type="term" value="P:cell wall modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033131">
        <property type="entry name" value="Pectinesterase_Asp_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000070">
        <property type="entry name" value="Pectinesterase_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01095">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00503">
        <property type="entry name" value="PECTINESTERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0063">Aspartyl esterase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pectinesterase" evidence="4">
        <location>
            <begin position="2"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase" evidence="4">
        <location>
            <begin position="162"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="37112" checksum="59904A3D241BB952" modified="2011-01-11" version="1">MLVGKESFCDFHTIQEAINVLEQSPSNEMETLTILSGTYEEEVRIYRSNLHIIGIGQVEIRMNRYARERNESGEEIGTFATPTLFVGGSHLILENLIISNTAGQGEHIGQAVAVYAHCDQTIFRNCTFKGYQDTLFTGPLPPAPKERLKFGGIPLKEHHAYYRQLYQHCYIEGTIDFIFGGATAYFEDCEIRSLRHHKNHTSYVTAASTPQGQTYGYVFDHCYLTAEPDITPVFLGRPWREYAKTVFVNCKMGDHIDPRGWDNWDTVANEKTVCYQEYGGSDEIASLRQQRVPWADCFEARTEAWSKEQVFEGVAFWKARRSDVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9I4</accession>
    <name>E3E9I4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-oxalocrotonate tautomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 4-oxalocrotonate tautomerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372196.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04440"/>
    <dbReference type="EnsemblBacteria" id="ADO57615">
        <property type="protein sequence ID" value="ADO57615"/>
        <property type="gene ID" value="PPSC2_17105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3654"/>
    <dbReference type="eggNOG" id="COG1942">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_148073_0_1_9"/>
    <dbReference type="OMA" id="TVIEINM"/>
    <dbReference type="OrthoDB" id="2013680at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.429.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037479">
        <property type="entry name" value="Tauto_MSAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014347">
        <property type="entry name" value="Tautomerase/MIF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38460">
        <property type="entry name" value="PTHR38460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14552">
        <property type="entry name" value="Tautomerase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55331">
        <property type="entry name" value="SSF55331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14991" checksum="7655C41FA21182FC" modified="2011-01-11" version="1">MAQIKIFGIKEKLNPIKKQLSEVIHSAVVDAFNYPPNKRFHRFFPMNHEDFIYADGRSEAYTIIEISIFEGRTTEAKKQLINLLFQRINELLGISPQDLEITIFETPKQNWGIRGVPGDELQLNYKVNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9N8</accession>
    <name>E3E9N8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Adenosine deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">adaA1</name>
        <name evidence="6" type="ORF">PPSC2_18115</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372408.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3875"/>
    <dbReference type="EnsemblBacteria" id="ADO57828">
        <property type="protein sequence ID" value="ADO57828"/>
        <property type="gene ID" value="PPSC2_18115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3870"/>
    <dbReference type="eggNOG" id="COG2169">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_81_3_9"/>
    <dbReference type="OMA" id="SCKSKVP"/>
    <dbReference type="OrthoDB" id="1327994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035451">
        <property type="entry name" value="Ada-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004026">
        <property type="entry name" value="Ada_DNA_repair_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016220">
        <property type="entry name" value="Me-P-triester_DNA_alkyl-Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02805">
        <property type="entry name" value="Ada_Zn_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000408">
        <property type="entry name" value="Alkyltransferas_AdaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57884">
        <property type="entry name" value="SSF57884"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0234">DNA repair</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="5">
        <location>
            <begin position="85"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="21950" checksum="5E20C3B3103DD62F" modified="2011-01-11" version="1">MANLSLSFEEMWDKIIACDRKYDGVFFTAVKTTRIYCRPSCRSRKPKKINVEFYFDVDTVEKAGFRACKRCQPHIDHSPYIRLVQNVVAFLINHYKEKLVLQDIADHVGISPFYLDRIFKQETSETPRTYLEKIRVDKASYLLKNTDLTNLEICYETGFQSPSNFYKSFRSLNQCSPSDYRKLHKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA16</accession>
    <name>E3EA16_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thiol-disulfide isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372721.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06860"/>
    <dbReference type="EnsemblBacteria" id="ADO58149">
        <property type="protein sequence ID" value="ADO58149"/>
        <property type="gene ID" value="PPSC2_19640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4188"/>
    <dbReference type="eggNOG" id="COG0526">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_121850_0_0_9"/>
    <dbReference type="OMA" id="PTIAEFR"/>
    <dbReference type="OrthoDB" id="1630944at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="32"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="170" mass="19697" checksum="7B4C30F67228B2C0" modified="2011-01-11" version="1">MKKGYIAGLSVIVLLIIGIAISAVVKFQDLEQVVQQKDKEIQASKSNYPEIYDHLNAVTIDGFKQFIQQDQSVFVYVGRPSCGDCNRFEPNFNKMIEQYDLGSKITFLNVHKIHKDKAQWNKFKADYNVKYTPTIAEFRNGKLVDKIEWMPKRDLSTDAVKEWLTFKKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAB0</accession>
    <name>E3EAB0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">WrbA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">wrbA</name>
        <name evidence="2" type="ORF">PPSC2_21470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373096.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08665"/>
    <dbReference type="EnsemblBacteria" id="ADO58528">
        <property type="protein sequence ID" value="ADO58528"/>
        <property type="gene ID" value="PPSC2_21470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4565"/>
    <dbReference type="eggNOG" id="COG0655">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051402_0_2_9"/>
    <dbReference type="OMA" id="CTTATVH"/>
    <dbReference type="OrthoDB" id="796211at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001226">
        <property type="entry name" value="Flavodoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00201">
        <property type="entry name" value="FLAVODOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="1">
        <location>
            <begin position="5"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="19735" checksum="AC1F254576A0DA9D" modified="2011-01-11" version="1">MTTRIMIVYDSENGHTERLARSIAEGARLNHTEVALKHVNEADVNELVSADAIIWGCPGHFGTISSGLKSWIDKLGYLWAQGKLVDKIGAVFCTTATVHGGLESTLLNLITPMLHQGMIIVGLPASITENALYGSYYGVGVTCPVETDPDGPPNLPTGDDLALGRSLGKRVAEMAGRYRSAERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAR8</accession>
    <name>E3EAR8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cobalt-precorrin-4 C(11)-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cbiF</name>
        <name evidence="7" type="ORF">PPSC2_23660</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373518.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11165"/>
    <dbReference type="EnsemblBacteria" id="ADO58982">
        <property type="protein sequence ID" value="ADO58982"/>
        <property type="gene ID" value="PPSC2_23660"/>
    </dbReference>
    <dbReference type="GeneID" id="66575339"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5008"/>
    <dbReference type="eggNOG" id="COG2875">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011276_7_1_9"/>
    <dbReference type="OMA" id="WSAMGEQ"/>
    <dbReference type="OrthoDB" id="1185397at2"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046026">
        <property type="term" value="F:precorrin-4 C11-methyltransferase activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11641">
        <property type="entry name" value="Precorrin-4_C11-MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006362">
        <property type="entry name" value="Cbl_synth_CobM/CibF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003043">
        <property type="entry name" value="Uropor_MeTrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01465">
        <property type="entry name" value="cobM_cbiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00839">
        <property type="entry name" value="SUMT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="6">
        <location>
            <begin position="6"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="28385" checksum="F0F68D06DAFC363C" modified="2011-01-11" version="1">MTLEPKVYIVGAGPGDPELITVKGSRILRTADVVLYTDSLVNDELIATAKPEAQVLQSSGMDLERQVEIMSEAVQAGRSVARVHTGDPAVYGAILEQMVLLKQRGVAYEIVPGVSSVFASAAVLGAELTVPDLTQTVILTRAEGRTPVPDREKLRDLASHHCTVALFLSATLAKKVVVEFLAAGWSEDTPVAVVQRATWPDQKIVRTTLAQLPADLRAAGITMHAMILAGWALDPGLVDKDAHRSKLYDKSFTHGYRKGVKPGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAU1</accession>
    <name>E3EAU1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">htpX</name>
        <name evidence="3" type="ORF">PPSC2_23770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BlaI transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373541.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11275"/>
    <dbReference type="EnsemblBacteria" id="ADO59005">
        <property type="protein sequence ID" value="ADO59005"/>
        <property type="gene ID" value="PPSC2_23770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5030"/>
    <dbReference type="eggNOG" id="COG3682">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_119090_1_2_9"/>
    <dbReference type="OMA" id="NHMIDAL"/>
    <dbReference type="OrthoDB" id="2027769at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005650">
        <property type="entry name" value="BlaI_family"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34134">
        <property type="entry name" value="PTHR34134"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03965">
        <property type="entry name" value="Penicillinase_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019455">
        <property type="entry name" value="CopR_AtkY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15920" checksum="28B37D0EBE4E34E3" modified="2011-01-11" version="1">MKRLNFKAGETGLNRFFGPLEAKIMDILWSTSDRSIKEVQTALEGDRDFNFNTVMTVMNRLVEKGILSKSIRGRTSLYRPVLSREEFMDEQSKELSHELVDEFGPLAVNHMIDALEVADPMLIERLEQKIKQWKKDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB88</accession>
    <name>E3EB88_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Potassium uptake system protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">trkA5</name>
        <name evidence="3" type="ORF">PPSC2_20880</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372989.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08110"/>
    <dbReference type="EnsemblBacteria" id="ADO58420">
        <property type="protein sequence ID" value="ADO58420"/>
        <property type="gene ID" value="PPSC2_20880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4454"/>
    <dbReference type="eggNOG" id="COG0569">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046525_3_2_9"/>
    <dbReference type="OMA" id="PEYEAGC"/>
    <dbReference type="OrthoDB" id="1768241at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006037">
        <property type="entry name" value="RCK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003148">
        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02080">
        <property type="entry name" value="TrkA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02254">
        <property type="entry name" value="TrkA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51202">
        <property type="entry name" value="RCK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RCK N-terminal" evidence="1">
        <location>
            <begin position="5"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="2">
        <location>
            <begin position="136"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="24145" checksum="246A54C529458F41" modified="2011-01-11" version="1">MAKKQYAVIGMGRFGSSVASALSEMGFDVLAIDSDEQRTQEMSNIVTHAVSADSTDEEALRALGIRNFDVIVVAIGEDIQASILTTLILKDMGVPALVVKAQNELHGKVLQKIGADKVVYPERDMGLRVAHHLTSPNILDYIELSKDYSILEMRAADSMIGKNLKELDIRARFGCNVMAIRRNQEMNISPYAEDRLEAGDVLIIVGHKDDLTKLELAFAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBE5</accession>
    <name>E3EBE5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FAD-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_21905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373186.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09050"/>
    <dbReference type="EnsemblBacteria" id="ADO58619">
        <property type="protein sequence ID" value="ADO58619"/>
        <property type="gene ID" value="PPSC2_21905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4660"/>
    <dbReference type="eggNOG" id="COG0654">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033626_0_0_9"/>
    <dbReference type="OMA" id="PELGYMV"/>
    <dbReference type="OrthoDB" id="867226at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="1">
        <location>
            <begin position="4"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="365" mass="40650" checksum="A271A6874143D226" modified="2011-01-11" version="1">MKLECEVCVVGGGPAGTLLSCLLAEQGVSTILIERQSVPGKAFRGEILNDEGQEVIQKHKLLEQIHEDHILASTRIEYWQHQQQIKTVEPALIHGNVGVHIPQPRFLEALLKQASTYESFRYLAGTTVTALEGDSEQGYTGLTARDKNGHEITIHSSLIVGADGRYSTVRKLAEMPVTNIRHGYDLLWAKIAAPAGWEPVTRLALVNGGQLALFSQAEGYIQIGWNVEEGSFLTLFKQSFESFIQLFTEAFPDLKHSVHDHIRSWKDFVPLDIFSSRSDTWAQNGLVLIGDAAHTMTPTGAFGLNAALKDADVLASELLRLRQQVYTAEDLKAFVDGRRQAVTELQERQLTMESTFHEHFLHIVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBK5</accession>
    <name>E3EBK5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Acetylglutamate kinase</fullName>
            <ecNumber evidence="7">2.7.2.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">N-acetyl-L-glutamate 5-phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">NAG kinase</fullName>
            <shortName evidence="7">NAGK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">argB</name>
        <name evidence="9" type="ORF">PPSC2_22920</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamyl 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:14629"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:44337"/>
            <dbReference type="ChEBI" id="CHEBI:57936"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 2/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the acetylglutamate kinase family. ArgB subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.8" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373361.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10395"/>
    <dbReference type="EnsemblBacteria" id="ADO58823">
        <property type="protein sequence ID" value="ADO58823"/>
        <property type="gene ID" value="PPSC2_22920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4853"/>
    <dbReference type="eggNOG" id="COG0548">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053680_1_0_9"/>
    <dbReference type="OMA" id="EGLYEDW"/>
    <dbReference type="OrthoDB" id="901370at2"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00107"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003991">
        <property type="term" value="F:acetylglutamate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042450">
        <property type="term" value="P:arginine biosynthetic process via ornithine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00082">
        <property type="entry name" value="ArgB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004662">
        <property type="entry name" value="AcgluKinase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037528">
        <property type="entry name" value="ArgB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000728">
        <property type="entry name" value="NAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00761">
        <property type="entry name" value="argB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1 7" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="8">
        <location>
            <begin position="21"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="57"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="7">
        <location>
            <position position="24"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="7">
        <location>
            <position position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="29430" checksum="EAA1B8F88340CF16" modified="2011-01-11" version="1">MQSAVGHADQAKHAGVARRNFVMKCGGSTLAALPDSFFDDLARLQSEGLQPVIVHGGGPAISDNLAKLGIETEFIHGLRKTTEPVLDVVEMVLAGSINKQIVRRIGMHGGRALGLSGSDGYLIEAKPVTNAAEVGWVGEVTHVQASIITGVLDMDYMPVIAPIGIDRSGQRYNINADTAAGAVASHLGVSRMIVVTDVPGILKKNGVEKKVLESITIQEIEDMISTGEIYGGMIPKVRAAIACIHGKVKEVVIVDGSEPQVLSRVLGGESIGTRIVRMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBN2</accession>
    <name>E3EBN2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373388.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4910"/>
    <dbReference type="EnsemblBacteria" id="ADO58850">
        <property type="protein sequence ID" value="ADO58850"/>
        <property type="gene ID" value="PPSC2_23045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4881"/>
    <dbReference type="eggNOG" id="ENOG5031RPF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117584_1_0_9"/>
    <dbReference type="OMA" id="AVANIYM"/>
    <dbReference type="OrthoDB" id="1613643at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045527">
        <property type="entry name" value="DUF6470"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20074">
        <property type="entry name" value="DUF6470"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="21336" checksum="72E3DED0F1AA65D1" modified="2011-01-11" version="1">MPIIPMLQIRQTPAILHIDADPGQYSIRQPSADMELKTRRAQLEIHQYQPQLTIDQSAAFSAYNGGNYLEMNNRIYSGLPQIFLQAIAHKVEQGNQMAAIHIPGNTVANVYGEDTETHVLSEFRGPASMDNVDIHVETHAPDITYTPAVSEMHVTVNRPEIEYTRGKLEIYMQQYPSVAYIPPEIDVMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ4</accession>
    <name>E3EBQ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tolC</name>
        <name evidence="5" type="ORF">PPSC2_23140</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373410.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4932"/>
    <dbReference type="EnsemblBacteria" id="ADO58872">
        <property type="protein sequence ID" value="ADO58872"/>
        <property type="gene ID" value="PPSC2_23140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4901"/>
    <dbReference type="eggNOG" id="COG1538">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_538452_0_0_9"/>
    <dbReference type="OMA" id="WAKEPAT"/>
    <dbReference type="OrthoDB" id="230567at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003423">
        <property type="entry name" value="OMP_efflux"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02321">
        <property type="entry name" value="OEP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168740" evidence="3">
        <location>
            <begin position="25"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="4">
        <location>
            <begin position="48"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="263"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="404"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="511" mass="55922" checksum="3BB1FA1A1E229941" modified="2011-01-11" version="1">MKRFGVALLSTLVLSSAFANLAGAQSGDIKVIINGVTQQYTQSPIVSQNTTLVPLRGVFESLGAQVEWDSKAKKVTASKNDDTLTLNIGSKLAYKNSKPVQLDAATQIQKGQVLVPLRFVSQSLGAKVNWDQTTRTVTISNQGSGSATDTYSLSSKPLAAPVTKVTYDTYYKDSLTYDDAVKLAIADSTTIKTVETNIDQTRRIMQETGKNIDYVPLEAGVEASDKAFKGYAQTNLNYEAAKKNLGMTKEGIEYNVKDLYNKLLQKQNAVKLAALNIEDAQRKLKVAQIKRDNQMSSDYEVTQATNLVTQNQAALDKAKKDLDSAFLALNQLIGYKPERRYELKDKPVYSEFKSNVETTVSQVLTSSTAVWLSEQKVDLAELSLKLYNFSSPGNTPYEAEQLNVEKAQLATEGTKRQLEEAVRNAYNTIKGLESQYSQIQAGLVSARSAADMAKKQFDVGLATELQVYEANLKVTTAEQQAEDIVASIDTLKMAYEKPWVLQGAASGAGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBS0</accession>
    <name>E3EBS0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Stage III sporulation protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spoIIID</name>
        <name evidence="4" type="ORF">PPSC2_23215</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373425.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10700"/>
    <dbReference type="EnsemblBacteria" id="ADO58888">
        <property type="protein sequence ID" value="ADO58888"/>
        <property type="gene ID" value="PPSC2_23215"/>
    </dbReference>
    <dbReference type="GeneID" id="66575430"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4916"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_174628_0_0_9"/>
    <dbReference type="OMA" id="VHKDMTE"/>
    <dbReference type="OrthoDB" id="1848020at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014208">
        <property type="entry name" value="Spore_III_D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018356">
        <property type="entry name" value="Tscrpt_reg_HTH_DeoR_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12116">
        <property type="entry name" value="SpoIIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02844">
        <property type="entry name" value="spore_III_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00894">
        <property type="entry name" value="HTH_DEOR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="10911" checksum="87A5181D393B93CF" modified="2011-01-11" version="1">MHDYIKERTIKIGRCIVETRNTVRTIAKEFGVSKSTVHKDLTERLPEINPDLADQVKHILEYHKSIRHLRGGEATKIKYKKTSGKRRGILVSGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX3</accession>
    <name>E3EBX3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetyl esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cah5</name>
        <name evidence="3" type="ORF">PPSC2_24180</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373632.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11705"/>
    <dbReference type="ESTHER" id="paeps-e3ebx3">
        <property type="family name" value="Acetyl-esterase_deacetylase"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59097">
        <property type="protein sequence ID" value="ADO59097"/>
        <property type="gene ID" value="PPSC2_24180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5120"/>
    <dbReference type="eggNOG" id="COG3458">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054209_0_0_9"/>
    <dbReference type="OMA" id="SDYKRAW"/>
    <dbReference type="OrthoDB" id="721431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008391">
        <property type="entry name" value="AXE1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039069">
        <property type="entry name" value="CE7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40111">
        <property type="entry name" value="PTHR40111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05448">
        <property type="entry name" value="AXE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AXE1" evidence="2">
        <location>
            <begin position="4"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="36430" checksum="891897CA4CE401EA" modified="2011-01-11" version="1">MPEDMSLQQLQSYMGSNPKPQDFDKYWERALQELERQPLEYTLEPADFVSPLVECYHLYFTGVGGARVHGKLARPKHLTEQGPALAMFHGYSCDSGDWFDKVSYAAHGFTVLAMDCRGQGGLSEDNLQVQGTTVRGHIIRGIDDPDPDRLYYRNVFLDTVQTVRILMSMEQVDPERIGAFGCSQGGALTVACAALEPRVRVAVPVYPFLSDYKRAWALDATTSAYEELVYYFRWFDPNHVRESEVFHRLGYIDIQHLADRIRGRVLFVTGLSDVICPPSTQFAVYNKIVSDKELLVYHEYGHEYLPYLSDRAMSEFLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBY4</accession>
    <name>E3EBY4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_24230</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373643.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5170"/>
    <dbReference type="EnsemblBacteria" id="ADO59108">
        <property type="protein sequence ID" value="ADO59108"/>
        <property type="gene ID" value="PPSC2_24230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5131"/>
    <dbReference type="eggNOG" id="COG0825">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067290_0_0_9"/>
    <dbReference type="OMA" id="WDGTNKR"/>
    <dbReference type="OrthoDB" id="1867606at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168798" evidence="1">
        <location>
            <begin position="33"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="36"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="67"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="349" mass="38660" checksum="D56E4F68507DA47D" modified="2011-01-11" version="1">MKSLKSMKKPVIITAVSALAISGALFSQSTYAAQVTKPIQAVYNNIKIIYNGTEVPADAKTEPFLLDGVTYIPLKLAGTALDKKVTWDGTNKRVVIADNGVPIDQSTVTALNNQITTLTQELNTAKAANTTKDATIAQLQKDNQTLKDTASKSSTDTLKDLERQLNRDYRDTNNANADITLKGDKNDITVTIELTESRWNDISSSRQKSYLEDISEDILKTFKDADIEGTVKNSSNGNKLATFDSDSKGNVDIEKLSSKIDLSEIKRVLLNDFDRKYNNVSIDFSVKGDSSEVTVDAYVKTDDWNSLTYYQKNRIQEDIISDIRNKNVSRVKGVVHSNENNSTLATFNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBZ1</accession>
    <name>E3EBZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sulfurtransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373650.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11780"/>
    <dbReference type="EnsemblBacteria" id="ADO59115">
        <property type="protein sequence ID" value="ADO59115"/>
        <property type="gene ID" value="PPSC2_24260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5137"/>
    <dbReference type="eggNOG" id="COG0607">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089574_6_1_9"/>
    <dbReference type="OMA" id="LGMLPIR"/>
    <dbReference type="OrthoDB" id="2056793at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="30"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="14252" checksum="D9FE47807A6B7447" modified="2011-01-11" version="1">MAKTFADMVQEARQHVQGITSQEARQRIESNPDTFVIDVQDSHDAGACGLIRGSANISLGMLPIRADLGVPQDLRDERLRDRNRPIITTCGAGGQAALAAYILQQMGFTNVAFIEGGTTAWKEAGFEVELY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC20</accession>
    <name>E3EC20_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">50S ribosomal protein L9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">rplI</name>
        <name evidence="10" type="ORF">PPSC2_25365</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Binds to the 23S rRNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the bacterial ribosomal protein bL9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373893.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12860"/>
    <dbReference type="EnsemblBacteria" id="ADO59360">
        <property type="protein sequence ID" value="ADO59360"/>
        <property type="gene ID" value="PPSC2_25365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5376"/>
    <dbReference type="eggNOG" id="COG0359">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078938_3_0_9"/>
    <dbReference type="OMA" id="MKIILTH"/>
    <dbReference type="OrthoDB" id="1959318at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.430.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.5.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00503">
        <property type="entry name" value="Ribosomal_L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000244">
        <property type="entry name" value="Ribosomal_L9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009027">
        <property type="entry name" value="Ribosomal_L9/RNase_H1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020594">
        <property type="entry name" value="Ribosomal_L9_bac/chp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020069">
        <property type="entry name" value="Ribosomal_L9_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036791">
        <property type="entry name" value="Ribosomal_L9_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020070">
        <property type="entry name" value="Ribosomal_L9_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036935">
        <property type="entry name" value="Ribosomal_L9_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21368">
        <property type="entry name" value="PTHR21368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03948">
        <property type="entry name" value="Ribosomal_L9_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01281">
        <property type="entry name" value="Ribosomal_L9_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55653">
        <property type="entry name" value="SSF55653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55658">
        <property type="entry name" value="SSF55658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00158">
        <property type="entry name" value="L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00651">
        <property type="entry name" value="RIBOSOMAL_L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="RIBOSOMAL_L9" evidence="9">
        <location>
            <begin position="13"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="43"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS00651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO59360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="16243" checksum="398177519C6422BC" modified="2011-01-11" version="1">MKVIFIKDMKGQGKKGQIKEVSDGYAANFLLPRGIARPATEGNMKTLENQNAAEEKRKQEEKEEAQVLGKKLEETTIQLKAKAGEGGRLFGAITSKQIAEAVAKTGIKLDKRKIELEEPIRTLGVTQMTVKLHPEVKATLKVQVTEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC99</accession>
    <name>E3EC99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-391</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-391</name>
        <name evidence="1" type="ORF">PPSC2_01270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368884.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13995"/>
    <dbReference type="EnsemblBacteria" id="ADO54242">
        <property type="protein sequence ID" value="ADO54242"/>
        <property type="gene ID" value="PPSC2_01270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.250"/>
    <dbReference type="eggNOG" id="COG3501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030496_2_0_9"/>
    <dbReference type="OMA" id="NETDWAF"/>
    <dbReference type="OrthoDB" id="1880900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="471" mass="53229" checksum="8193ED2B0826D5D4" modified="2011-01-11" version="1">MSLGYDNIQIQPYELVELEHLTLAKKINEHTRLYFTGIIPEEMQDSYVETTEKNTVIEVSHRNESGESKPLFSGIALSVEVKVVRDVYYLEVEAISHTYRMDIQQRTRSFQYTKMTIPQMLEQIGKDYEGLDVIDGATGGEPIGRIAIQYQETDWAFLRRMASRYHTSLMPVSRFDSPKFYFGIEDSSAQAVLDHTRYTVRKQMLPFRYFQENEQAKVNENDFIFYEVETDEVLDLGAQLTFQGHSLYVMEAYTEMRQGLLRHQYVLASYKGLRQKGYYQEKLAGASLGGVVVDVRQDQVRIHLDCDEKQAVDQAHWFNYSTVYSGGGHTGWYVMPEKGDPVSLYFPGSREEDGVAGSAVRRTDRGSGHNKLSNPQMKIWRTPHGKEIRLGPDELVVTGKDGAIFIKLDDKEGIHIVSNKQVSISAGGNLSLSAGKTMSLSAGSELRMDCNGSHIQLSGSADMKGSEVKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECD0</accession>
    <name>E3ECD0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lactose ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lacF1</name>
        <name evidence="7" type="ORF">PPSC2_01430</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368915.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14145"/>
    <dbReference type="EnsemblBacteria" id="ADO54273">
        <property type="protein sequence ID" value="ADO54273"/>
        <property type="gene ID" value="PPSC2_01430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.283"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_2_9"/>
    <dbReference type="OMA" id="WITDPFW"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="216"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="269"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="75"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="298" mass="33430" checksum="41BEA466BE3C860D" modified="2011-01-11" version="1">MKTAAPKMTTTRLKAGMTGWLFISIAVIMIAAFYFYPMIQALILSFKTGTGSNLSFNGIDNYKRLFTDKMFITAVKNTFIYLIFQVPLMVILALFISVLLNDKNLKFKGFFRTAIFLPCITSLVAYSVVFKYLFSSDGLVNSLLLNLHVIGTPIQWITDPFWAKVTIIIAITWRWTGYNMIFYLSGLQNIDSSIYEAARIDGASPIRQFFSITVPLLKPIILFTSITSTIGTLQLFDEIMNITKGGPGNATSSISQYIYNLSFKYSSDFGYAATVSYSIVIMIIILSIIQFKVAGEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECG7</accession>
    <name>E3ECG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ugpB1</name>
        <name evidence="1" type="ORF">PPSC2_01600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368952.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14365"/>
    <dbReference type="EnsemblBacteria" id="ADO54310">
        <property type="protein sequence ID" value="ADO54310"/>
        <property type="gene ID" value="PPSC2_01600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.320"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_10_5_9"/>
    <dbReference type="OMA" id="DAMFMSN"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="432" mass="48166" checksum="FEEADDCCCE55B541" modified="2011-01-11" version="1">MDNYMSWIKIGFFLSVLFLLAAACSTSPKIENTAGQKVRLTMQVWGNPAEVKVYQRALDAFEKENPNIEVKLVPVPGDQYEQKLLTQLQGSRGPDVFYSYESTMARLIGAKQVQPLGEFLKSDASDVKAEHFPEGLWGPAKRDGEIYGVTPDSNPMVMYYNKKVFKEAGVKTPQEYYDEGKWNWDAFEEVTSKLKAAGKQGYIAENWWAHWYSWVWSNGGRIFDEQGKYVLDHNEKGKEAFAFMHDMVKKGNAVYLGSLPKGQGADAMFMSNQVGMLAAGRWLEPLFSQNKSLDFDYIYWPSNTGKNEPVAIPVAYVAVNKNSPHVQEAMKLAAFYVSVKGQEERLVEGGNAMGTLAAADESIMKKATIEHSGYLTEGRDKGHAYGSALAYDAQVPGLNSDITETIDLMFLGKQDAATTIEKLNQIISKAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECZ5</accession>
    <name>E3ECZ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arabinose-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">araN</name>
        <name evidence="2" type="ORF">PPSC2_04355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369498.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17165"/>
    <dbReference type="EnsemblBacteria" id="ADO54864">
        <property type="protein sequence ID" value="ADO54864"/>
        <property type="gene ID" value="PPSC2_04355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.868"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_2_4_9"/>
    <dbReference type="OMA" id="WVSAVWA"/>
    <dbReference type="OrthoDB" id="534010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168788" evidence="1">
        <location>
            <begin position="30"/>
            <end position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="430" mass="48333" checksum="0985DF3C467976AD" modified="2011-01-11" version="1">MLLRRKSMALMLMAVVLMAGLLQGCSFKSDEKDGPGTELVLWTFNELHEKFFLQMADQWNQQHPDELINLKANTFPYDNHHSKLSIALQSGVGAPDIADIEVNKIGNFLKGIPQLVPLNPVIDPEINNIVPSRVQIYGKDGKYYGIDFHVGAEVMYYNKEIMDQAGVDPDSIVTWADYAAAGKQVLAKTGKPMATLETNDLWSYWPMISQQNSDFLDDKGELTLDNETNIKTLEFLQQMIKDKIAIPAPGGGHHMEEYYGFMNKGGAASVWMPMWYMGRFTDYMPDLKGKIIIRPMPAWEKGGYRSAGMGGTGTVVTNQSKHQDLAMRFLAFAKLSKQGNVEIWKQLGFDPIRSEVWTMPEAKAKNKFTEYFGTNIFDTLIEVKDEINAVHIGPKTPDIASAVRNKILYRTLQSGEDPATVLHELADELR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED74</accession>
    <name>E3ED74_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">RNA polymerase sigma factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">M1-584</name>
        <name evidence="8" type="ORF">PPSC2_02310</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54431.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886081.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15075"/>
    <dbReference type="EnsemblBacteria" id="ADO54431">
        <property type="protein sequence ID" value="ADO54431"/>
        <property type="gene ID" value="PPSC2_02310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.440"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="6">
        <location>
            <begin position="20"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4" evidence="7">
        <location>
            <begin position="122"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54431.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="22146" checksum="0FBC2EC9AC04E8AD" modified="2015-05-27" version="2">MTMLVAETLAGSREAYKELYDYTIHTVYKSVHFLLEEKADVDDVVQEIYIQVYKSLETFDTNRSFQPWLMGIVMRQIRAYRRKRWMRMRITSKAESLEHHAAFDFSEEIVDKVANHVLLQAVQQLSFKLKQVIVLHYLHEYSQEEIANILDIPLGTVKSRIHAALQKLRSKERQGHFLIGKVEKIHEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDQ7</accession>
    <name>E3EDQ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mcpA5</name>
        <name evidence="8" type="ORF">PPSC2_06670</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369996.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19635"/>
    <dbReference type="EnsemblBacteria" id="ADO55365">
        <property type="protein sequence ID" value="ADO55365"/>
        <property type="gene ID" value="PPSC2_06670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1373"/>
    <dbReference type="eggNOG" id="COG0840">
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    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="MA"/>
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    </dbReference>
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        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="1 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="209"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="280"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="533"/>
            <end position="567"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="567" mass="61067" checksum="C5488521B76E3D2D" modified="2011-01-11" version="1">MKLFNRSLGAKLRIMFLLIQLFASLLFSISFYAVSMSIINSSVMPQVDQLLETGAKNVYQDLNISLAVQAGQGSGSDSGSAMQMEAYLQDKVDTLKLESAYIAVLKDDGKAEVVARNVKSAYKVKDTLVPVEDIKEAKQGEMNISGIYSDSHGVHKTAFFAISGSNLILGVNEDVGFVQEKSQQILWICIGITLTTLILGGVISTLVIRKVVQPIAELVRHSEKIAQGDLSQDTKVHGVNEIAQLARSFQSMSHNLKEMIGHVLTTSGAVVKGSDELLRRTEAMSVKVQDSTAAAEEVAKGSNSIASAAAENAQAMEEIAQGVQHIASSANDVSDQISEATKETVNGNTLAQKAVAQMSQVGHAADESLRYIHSMNERSEAIGSIVSAIFDITKQIQMLSLNASIEAARAGEHGRGFAVVAGEVRKLAEQSKEATQEISDYLVTIQEVSQQSVDSVTQVSREIHSGTEMVQQASFAFNQLSELMQKINATIQTVSAATEQVSASSEEVSASVEETALIAANAQHMIQEIGLNADEQLNEMESQSEVVRQLSQQATELQKAVQKFKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDQ9</accession>
    <name>E3EDQ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcription antiterminator LicT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arbG1</name>
        <name evidence="2" type="ORF">PPSC2_06680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1388"/>
    <dbReference type="EnsemblBacteria" id="ADO55367">
        <property type="protein sequence ID" value="ADO55367"/>
        <property type="gene ID" value="PPSC2_06680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1375"/>
    <dbReference type="eggNOG" id="COG3711">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078802_0_0_9"/>
    <dbReference type="OMA" id="MTIHIAR"/>
    <dbReference type="OrthoDB" id="1193348at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="CAT_RNA-bd_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="PRD"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="65"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="171"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="32255" checksum="D1746611AD585CF3" modified="2011-01-11" version="1">MKIAKVLNNNVVTVIDEQQKELVIMGRGIAFKKNTGDEIEEGKIEKIFKLESTEVSRKLMTLMSDIPIEYVEISDEIIQYAKTILGVELHDSIYISLTDHIHFAIERYRLGMDIKNALYWEIKRMYRKEFAIGTKALHMIQDKLGVTLPDDEGAFIALHLVNAQLNSEMRETITLTNIVKDIINIVSRFFVMELDEESLSYYRFITHLKFFAQRVMNGTPVQNTDNSLHDMVKVQYKDAYACAEKIRDYTTKIYGRSLSQDEMLYLTIHIERIIKNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDW9</accession>
    <name>E3EDW9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YabN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yabN</name>
        <name evidence="3" type="ORF">PPSC2_00230</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13245"/>
    <dbReference type="EnsemblBacteria" id="ADO54035">
        <property type="protein sequence ID" value="ADO54035"/>
        <property type="gene ID" value="PPSC2_00230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.45"/>
    <dbReference type="eggNOG" id="COG3956">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038356_1_0_9"/>
    <dbReference type="OMA" id="PGHPMVA"/>
    <dbReference type="OrthoDB" id="1099129at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11723">
        <property type="entry name" value="YabN_N_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004518">
        <property type="entry name" value="MazG_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011551">
        <property type="entry name" value="NTP_PyrPHydrolase_MazG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024180">
        <property type="entry name" value="Tetrapyrrole_Mease/MazG_pred"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035013">
        <property type="entry name" value="YabN_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30522">
        <property type="entry name" value="PTHR30522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03819">
        <property type="entry name" value="MazG"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002845">
        <property type="entry name" value="Ttrprl_mtas_MazG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00444">
        <property type="entry name" value="mazG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TP_methylase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="MazG" evidence="2">
        <location>
            <begin position="260"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="domain" description="MazG" evidence="2">
        <location>
            <begin position="405"/>
            <end position="462"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="499" mass="56502" checksum="BD13F737EAF38933" modified="2011-01-11" version="1">MSVTLTIVGLGSGDPDQLTIGILNKMRGASALYLRTKEHPAVRVLDEFEVAFESFDAVYETKDSFPEVYEEITSQLMEKVAKAADGSEIVYAVPGHPMVAEAAVQLLKERCPAQGIELNILGGESFLDEAFVRLGFDPIEGFQLLDAGTLDASWLQPQLHTLIGQVYDTFTASDVKLCLMERYPDDYEVYVGHALGVEGEEAVHKVPLYELDRVEGYGNLSLVYIPRSEDEALKRRSFDRLHEIVDILRSPEGCPWDREQTHQSIRKNLIEETYEVIETIDEDDPEHMKEELGDLLLQILLHAQMEEEVGTFNVYDVIQGLNDKLIFRHPHVFGDNQANDAEEALQNWEQMKAEEKRLKGTAAANPSVLDGVPRDLPALMKSYKLQKKAAKVGFNWDSIEGVFDKLDEEVAELKEAVREGHSMEAQLLELGDVLFVAVNAARFMDVDPEEALSATNRKFVSRFQYIEQKLREQGRRPEDSSVDEMETYWQEAKKLLDRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE97</accession>
    <name>E3EE97_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR2</name>
        <name evidence="6" type="ORF">PPSC2_05075</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369653.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1038"/>
    <dbReference type="EnsemblBacteria" id="ADO55020">
        <property type="protein sequence ID" value="ADO55020"/>
        <property type="gene ID" value="PPSC2_05075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1027"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_0_9"/>
    <dbReference type="OMA" id="ADPFYGP"/>
    <dbReference type="OrthoDB" id="664909at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="36888" checksum="0525AE145702050B" modified="2011-01-11" version="1">MPTIIDISRVSGLSKSTVSRVLNDHPHVSIESRQKVQKAITELGYVRNTQGVQLRLQASNHIGVLVPDVEHPYFSQLVSTLSRSLGSMGYQLVIYQTELSREYEREVYARLARREMDAVVIAHSHFSEREIKEYIGSHIGIICNEAMDGEFLDVFRLDEEDAVFQATAYLLSKGRRHLFFCMDHLTQLQEKRWNGFQMAHRQFGLACTKSQCYTGLMTMEDGYALGEQLFTSDQLPDGMITGSDFVATGLLKAAKQRGISVPQEMSVIGFDNHPVGLMTNPELTTLTNCIPDMVKDVTECLTRRLKGMRSAPITKIYKTSLIIRNST</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EET9</accession>
    <name>E3EET9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 8">Transcription elongation factor GreA</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Transcript cleavage factor GreA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">greA</name>
        <name evidence="11" type="synonym">greA1</name>
        <name evidence="11" type="ORF">PPSC2_00365</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7 8">Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the GreA/GreB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013308160.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13380"/>
    <dbReference type="EnsemblBacteria" id="ADO54062">
        <property type="protein sequence ID" value="ADO54062"/>
        <property type="gene ID" value="PPSC2_00365"/>
    </dbReference>
    <dbReference type="GeneID" id="66574892"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.72"/>
    <dbReference type="eggNOG" id="COG0782">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_101379_2_1_9"/>
    <dbReference type="OMA" id="TWLTQEA"/>
    <dbReference type="OrthoDB" id="1536415at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070063">
        <property type="term" value="F:RNA polymerase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00105">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018151">
        <property type="entry name" value="TF_GreA/GreB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006359">
        <property type="entry name" value="Tscrpt_elong_fac_GreA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028624">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023459">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022691">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036805">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30437">
        <property type="entry name" value="PTHR30437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03449">
        <property type="entry name" value="GreA_GreB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006092">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46557">
        <property type="entry name" value="SSF46557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01462">
        <property type="entry name" value="greA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00829">
        <property type="entry name" value="GREAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 7 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7 8" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="GreA_GreB_N" evidence="10">
        <location>
            <begin position="6"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="GreA_GreB" evidence="9">
        <location>
            <begin position="84"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17395" checksum="EBDBB562B2E7939B" modified="2011-01-11" version="1">MSDKEVILTQEGLRKLEDELENLKSVKRREVAERIKVAIGYGDISENSEYEDAKNEQAFIEGRVITLEKMLRNARIINSDEIDTDVVGVGATVTVEDLEFGDITEYAIVGSAESDPLQNKISNESPVGKAILGKKKGTVVDVTVPAGVIQYKIVDIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEU1</accession>
    <name>E3EEU1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ATP synthase subunit J</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ktrB1</name>
        <name evidence="10" type="ORF">PPSC2_00375</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368710.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13390"/>
    <dbReference type="EnsemblBacteria" id="ADO54064">
        <property type="protein sequence ID" value="ADO54064"/>
        <property type="gene ID" value="PPSC2_00375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.74"/>
    <dbReference type="eggNOG" id="COG0168">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026429_0_1_9"/>
    <dbReference type="OMA" id="WLAAFFQ"/>
    <dbReference type="OrthoDB" id="756220at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015379">
        <property type="term" value="F:potassium:chloride symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003445">
        <property type="entry name" value="Cat_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004772">
        <property type="entry name" value="TrkH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02386">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00933">
        <property type="entry name" value="2a38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0630">Potassium</keyword>
    <keyword evidence="4" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="77"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="191"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="229"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="296"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="350"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="406"/>
            <end position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="445" mass="48234" checksum="02380A33C5DA8924" modified="2011-01-11" version="1">MKRSVKLSRFASPPFILVIGYVLIIALGTLLLMLPIANHGGHAPHWIDSLFTSVSAACVTGLVVVDVDSTYTVFGETVILVLMQLGGLGFMTLATLFALLLGRRLSLKDRLLLKEAINADSMEGIVRIIRKVLIFSFTIEAIAAVVLALRWMREMPVGQAIYYGIFHSVSLFNNGGFDLFGTSFQQYAGDFVFNMIASVLVISGGLGFLVLSDLFDFRRARRLTLHSKMVLSVSGALIVIGALVIFIFEFTNARTLGELNWEGKVYAAVFQSVSTRSSGTSTVDISGLRQASQFFIMLLMIIGASPGSTGGGIKTTTFLLMVGALIAVMRGQKEIVFFRHRVPQDIMMRALTIIVMALFIFSIVVILLLMTEDAPFLSLAFEAASAIGTVGLSVGVTPGLSDAGKLIICVTMFIGRIGPLTIAYAIRPRSTKTLYRRPEGHIVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF02</accession>
    <name>E3EF02_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Probable DNA-directed RNA polymerase subunit delta</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">RNAP delta factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rpoE</name>
        <name evidence="9" type="synonym">rpoE1</name>
        <name evidence="9" type="ORF">PPSC2_00680</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">RNAP is composed of a core of 2 alpha, a beta and a beta' subunits. The core is associated with a delta subunit and one of several sigma factors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the RpoE family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368770.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13670"/>
    <dbReference type="EnsemblBacteria" id="ADO54125">
        <property type="protein sequence ID" value="ADO54125"/>
        <property type="gene ID" value="PPSC2_00680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.134"/>
    <dbReference type="eggNOG" id="COG3343">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116648_1_0_9"/>
    <dbReference type="OMA" id="TWGLRSW"/>
    <dbReference type="OrthoDB" id="2007175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00357">
        <property type="entry name" value="RNApol_bact_RpoE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007759">
        <property type="entry name" value="Asxl_HARE-HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038087">
        <property type="entry name" value="RNAP_delta_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029757">
        <property type="entry name" value="RpoE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05066">
        <property type="entry name" value="HARE-HTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04567">
        <property type="entry name" value="RNAP_delt_lowGC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51913">
        <property type="entry name" value="HTH_HARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6 9" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4 6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH HARE-type" evidence="8">
        <location>
            <begin position="17"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="95"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="106"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="21041" checksum="B686DAA311D8138E" modified="2011-01-11" version="1">MSTPLNLKIDPEKVHETPMVDLAFMVLKAANTPYYYRDLMNEVAKLRGLSDEEINDVIAQLYTEINIDGRFACVGTNLWGLKRWYPVDKSEDALTGAKRPRIINDEDDDDEDDYHEEEETYNSDDDFDADSEDEDGEDELFDGEDDDDSDDDVVIDDEDLSDEEDTDDENDDESIEDDDDSLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFD9</accession>
    <name>E3EFD9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_05450</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369735.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18360"/>
    <dbReference type="EnsemblBacteria" id="ADO55102">
        <property type="protein sequence ID" value="ADO55102"/>
        <property type="gene ID" value="PPSC2_05450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1106"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_0_9"/>
    <dbReference type="OMA" id="ERFCLEW"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="32"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="325"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="433" mass="48596" checksum="61A9625BF288987B" modified="2011-01-11" version="1">MTKSKGTDNATTASLIDQAIPEVSIATAKRYQVLIADDEPIIREGIRDCLDWTALGMEVVAEAEDGEEALKLVGQLSIDIVLVDMNMPFMDGIELIRQLREGRSECRCLIISGHDEFAYAQEAVRLGVEDYILKPVNADQLHAALSRLRQRLDEEHKRAAYVEQAAGQIERNIPLLRQRFCLEWLEGQHTGKDVMEQLAFLRLPSRPPVQIGVVRWPAAEARQTIMRENDRQLFLFAAENIIGELLEDRPHVLFRDANGLIGICLWQEAPETIGASMEQAIGRYLNIAVHTHVESNEGGLEGAINAYRVSRDRVYGEAQLSPIVRRARQLIQEGYADRELTLEALASRLQVSAVYLSRVLKKELNDSFVTLVTRARIRKAVQLLDSTTLSVLDIAERTGYDSQHYFSTAFKKAMGVSPVQYRKGGGIQENSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFJ3</accession>
    <name>E3EFJ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YusI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yusI</name>
        <name evidence="2" type="ORF">PPSC2_07215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ArsC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370111.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20195"/>
    <dbReference type="EnsemblBacteria" id="ADO55484">
        <property type="protein sequence ID" value="ADO55484"/>
        <property type="gene ID" value="PPSC2_07215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1490"/>
    <dbReference type="eggNOG" id="COG1393">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116644_2_0_9"/>
    <dbReference type="OMA" id="PMRNTSG"/>
    <dbReference type="OrthoDB" id="1606021at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006660">
        <property type="entry name" value="Arsenate_reductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006504">
        <property type="entry name" value="Tscrpt_reg_Spx/MgsR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30041">
        <property type="entry name" value="PTHR30041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03960">
        <property type="entry name" value="ArsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01617">
        <property type="entry name" value="arsC_related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51353">
        <property type="entry name" value="ARSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="13742" checksum="27036187DC06D3CF" modified="2011-01-11" version="1">MSQLKVYQYSKCSTCRNAVKWLQNKGHETELIPIFEQPPGPEELEDLINKSGLELKKFFNTSGEVYKELKLKDKLGSMSREEQISLLSSNGRLIKRPIVTDGSKVTVGFKEETFEGTWGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN7</accession>
    <name>E3EFN7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">XRE family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yycF</name>
        <name evidence="9" type="ORF">PPSC2_07420</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370155.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20395"/>
    <dbReference type="EnsemblBacteria" id="ADO55528">
        <property type="protein sequence ID" value="ADO55528"/>
        <property type="gene ID" value="PPSC2_07420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1534"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OMA" id="MCAHVLV"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="130"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="130"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="228" mass="25560" checksum="5FDE4E6BAAD9CD7E" modified="2011-01-11" version="1">MDKRILIADDEASIRNALAYALKREGFLVETAVDGEDALEKVRLFHPDVLILDVMMPKLGGYEVCRRLESRKGVGILLLTAKNDIVDKVLGLELGADDFMSKPFDLRELLARIKALVRRLEREGAPAPEGTEVILGPLRVRPSSRTAELGVKALDLTPKEFDVLALLVSHTGRVYTRDDLLEQVWGIDYVGGTRTVDIHIQRLRKKLEPHQSMLQTVYGIGYKAEKMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFV3</accession>
    <name>E3EFV3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">araR1</name>
        <name evidence="3" type="ORF">PPSC2_08750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370444.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21225"/>
    <dbReference type="EnsemblBacteria" id="ADO55825">
        <property type="protein sequence ID" value="ADO55825"/>
        <property type="gene ID" value="PPSC2_08750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1843"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_15_0_9"/>
    <dbReference type="OMA" id="DYIFPRI"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01541">
        <property type="entry name" value="PBP1_AraR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033532">
        <property type="entry name" value="AraR_ligand_bind_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="2">
        <location>
            <begin position="2"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="41734" checksum="A1046BBFFEFF1648" modified="2011-01-11" version="1">MAPKYIQVKQEILSWIHSSKLEPQSQLPSEHEMSEQFAVSRQTVRQALGELVQEGWLFRIQGKGTFVATREHKQPEDPRTIGVVTTYISDYIFPSIVQGIESKLSRQGYKLLLSSTGNDPEQERQCLEMLLSQPLSGIIIEPTKSGERNPNLNYYLTVENRQIPYLMINARYEEMDAPCLRLDDEKGGFLAAEHLIKLGHRRLAGFFKTDDMQGILRMKGFVAAHRKYGVTLHPNAVTTYRTEEKNELPLQRASQLLAMEAGERPTGWVTYNDELAVRLLDIVRSADLSIPQDLSLVGFDDSFLATATEIKLTTIRHPKEELGLRAADTMLSMIKEKGYREEDRQWIIPPELIVRESTGPAQAMSGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG17</accession>
    <name>E3EG17_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Succinate--CoA ligase [ADP-forming] subunit beta</fullName>
            <ecNumber evidence="6">6.2.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Succinyl-CoA synthetase subunit beta</fullName>
            <shortName evidence="6">SCS-beta</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">sucC</name>
        <name evidence="9" type="ORF">PPSC2_09805</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + CoA + succinate = ADP + phosphate + succinyl-CoA</text>
            <dbReference type="Rhea" id="RHEA:17661"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.2.1.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Carbohydrate metabolism; tricarboxylic acid cycle; succinate from succinyl-CoA (ligase route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heterotetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the succinate/malate CoA ligase beta subunit family.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.5" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370664.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22275"/>
    <dbReference type="EnsemblBacteria" id="ADO56050">
        <property type="protein sequence ID" value="ADO56050"/>
        <property type="gene ID" value="PPSC2_09805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2067"/>
    <dbReference type="eggNOG" id="COG0045">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037430_0_2_9"/>
    <dbReference type="OMA" id="ITACDEV"/>
    <dbReference type="OrthoDB" id="316012at2"/>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004775">
        <property type="term" value="F:succinate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00558">
        <property type="entry name" value="Succ_CoA_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013650">
        <property type="entry name" value="ATP-grasp_succ-CoA_synth-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005811">
        <property type="entry name" value="CoA_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017866">
        <property type="entry name" value="Succ-CoA_synthase_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005809">
        <property type="entry name" value="Succ_CoA_synthase_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11815">
        <property type="entry name" value="PTHR11815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08442">
        <property type="entry name" value="ATP-grasp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00549">
        <property type="entry name" value="Ligase_CoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001554">
        <property type="entry name" value="SucCS_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01016">
        <property type="entry name" value="sucCoAbeta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01217">
        <property type="entry name" value="SUCCINYL_COA_LIG_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 6 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="ATP-grasp" evidence="8">
        <location>
            <begin position="9"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding; shared with subunit alpha" evidence="6">
        <location>
            <begin position="321"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="53"/>
            <end position="55"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="213"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>substrate</name>
            <note>ligand shared with subunit alpha</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="41187" checksum="2043F52B0AD093E0" modified="2011-01-11" version="1">MNIHEYQGKEVLKQYGVAVPNGKVAYTVEEAVAAAESLGSAVTVVKAQIHAGGRGKAGGVKVAKGLDEVRTIASEILGKVLVTHQTGAEGKEVKRLLIEEGCDIRKEYYVGVVVDRATGRIVLMASEEGGTEIEEVAAATPEKIFKAVVDPAIGLQVHQARKLAYEINIPNELVNKAVKFMLALYEAFVDKDCSIAEINPLVVTGDGNVLALDAKLNFDSNALFRHKDILELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVGGGATTEKVTEAFKIILSDPKVEGIFVNIFGGIMQCDIIANGVVEAAKQLGLTRPLVVRLEGTNVELGKQILAESGLNIVAADSMADGAQKIVELVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG25</accession>
    <name>E3EG25_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Flagellar basal-body rod protein FlgC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flgC1</name>
        <name evidence="9" type="ORF">PPSC2_09845</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="4 5">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370672.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22315"/>
    <dbReference type="EnsemblBacteria" id="ADO56058">
        <property type="protein sequence ID" value="ADO56058"/>
        <property type="gene ID" value="PPSC2_09845"/>
    </dbReference>
    <dbReference type="GeneID" id="66577946"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2075"/>
    <dbReference type="eggNOG" id="COG1558">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_123272_0_0_9"/>
    <dbReference type="OMA" id="YVAYPNI"/>
    <dbReference type="OrthoDB" id="1870921at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030694">
        <property type="term" value="C:bacterial-type flagellum basal body, rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006299">
        <property type="entry name" value="FlgC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01395">
        <property type="entry name" value="FlgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="9" id="KW-0966">Cell projection</keyword>
    <keyword evidence="9" id="KW-0969">Cilium</keyword>
    <keyword evidence="9" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="7">
        <location>
            <begin position="7"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="8">
        <location>
            <begin position="100"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="75"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="75"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="16238" checksum="93030A218BC96C5C" modified="2011-01-11" version="1">MKINNGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAIPYRRKTVVLEPNQSGFADVLKAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEMVDMISATRSYEANVTALNASKAMVSKALEIGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG56</accession>
    <name>E3EG56_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Metallothiol transferase FosB</fullName>
            <ecNumber evidence="6">2.5.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Fosfomycin resistance protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">fosB</name>
        <name evidence="8" type="ORF">PPSC2_10695</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the fosfomycin resistance protein family. FosB subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370855.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23090"/>
    <dbReference type="EnsemblBacteria" id="ADO56249">
        <property type="protein sequence ID" value="ADO56249"/>
        <property type="gene ID" value="PPSC2_10695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2265"/>
    <dbReference type="eggNOG" id="COG0346">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_121356_0_0_9"/>
    <dbReference type="OMA" id="IPRNDIQ"/>
    <dbReference type="OrthoDB" id="1984437at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01512">
        <property type="entry name" value="FosB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022858">
        <property type="entry name" value="Metallothiol_Trafse_FosB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="VOC" evidence="7">
        <location>
            <begin position="5"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="16643" checksum="162A454A2DB66E62" modified="2011-01-11" version="1">MNIQGWNHICFSVSNLEKSIQFYQNVLDGKLLVKGRKLAYLDCLGMWLALNVEEDIPRNEIHHSYTHIAFSVAEADFESMLNKLRTLNVTILPRRERNEQDKRSVYFTDPDGHKFEFHTGQLQDRLEYYKNAKKHMTFYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="80" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGE8</accession>
    <name>E3EGE8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">2,3-bisphosphoglycerate-independent phosphoglycerate mutase</fullName>
            <shortName evidence="8">BPG-independent PGAM</shortName>
            <shortName evidence="8">Phosphoglyceromutase</shortName>
            <shortName evidence="8">iPGM</shortName>
            <ecNumber evidence="8">5.4.2.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gpmI</name>
        <name evidence="14" type="synonym">pgm1</name>
        <name evidence="14" type="ORF">PPSC2_00965</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>(2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate</text>
            <dbReference type="Rhea" id="RHEA:15901"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:58289"/>
            <dbReference type="EC" id="5.4.2.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="8">Binds 2 manganese ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 3/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the BPG-independent phosphoglycerate mutase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.12" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368820.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13955"/>
    <dbReference type="EnsemblBacteria" id="ADO54176">
        <property type="protein sequence ID" value="ADO54176"/>
        <property type="gene ID" value="PPSC2_00965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.180"/>
    <dbReference type="eggNOG" id="COG0696">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026099_2_0_9"/>
    <dbReference type="OMA" id="FMDGRDT"/>
    <dbReference type="OrthoDB" id="338375at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00186"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046537">
        <property type="term" value="F:2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006007">
        <property type="term" value="P:glucose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16010">
        <property type="entry name" value="iPGM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1450.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01038">
        <property type="entry name" value="GpmI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011258">
        <property type="entry name" value="BPG-indep_PGM_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006124">
        <property type="entry name" value="Metalloenzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036646">
        <property type="entry name" value="PGAM_B_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005995">
        <property type="entry name" value="Pgm_bpd_ind"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31637">
        <property type="entry name" value="PTHR31637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06415">
        <property type="entry name" value="iPGM_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01676">
        <property type="entry name" value="Metalloenzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001492">
        <property type="entry name" value="IPGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64158">
        <property type="entry name" value="SSF64158"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01307">
        <property type="entry name" value="pgm_bpd_ind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 8 11" id="KW-0464">Manganese</keyword>
    <keyword evidence="4 8 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metalloenzyme" evidence="12">
        <location>
            <begin position="5"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="domain" description="iPGM_N" evidence="13">
        <location>
            <begin position="83"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="154"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="262"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphoserine intermediate" evidence="8 9">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="337"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="404"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="408"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="445"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="446"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="463"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001492-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001492-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR001492-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF06415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO54176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="514" mass="56873" checksum="4A72D00F0E2B1207" modified="2011-01-11" version="1">MTAPKPVALIIMDGFGLRDTVEGNAVAQANKPNYDRYLKQYPHTTLTASGEAVGLPEGQMGNSEVGHLNIGAGRIVYQDLTRISKSIREGEFFDNETLVKAVQHAKKNNTKLHLYGLLSDGGVHSHISHLFAMLDLAKKEGLTEVYIHAFMDGRDVMPDSGVGFMQQLVAKIQEVGIGQIATVQGRYYAMDRDKRWERVEKSYRAIVYGEGPQYTDPLEALKESYEKSVFDEFVEPTVIVKADGSPVGLVESNDSVVFLNFRPDRAIQLSQVFTNEDFRGFDRGPKWPKDLHFVCLTLFSETVGGFVAYEPKNLDNTFGEVLVQNNKKQLRIAETEKYPHVTFFFSGGRDVELPGETRILINSPKVATYDLQPEMSAYEVADAAVKEIEADKHDAIILNFANPDMVGHSGMLEPTIKAVETTDECVGRVVDAVKAKGGVVIIIADHGNADMEIDEQGRPFTAHTTNPVPFILTDENIVLREHGILADVAPTLLDLMQLPQPAEMTGKSMIASRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGJ4</accession>
    <name>E3EGJ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_03305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369270.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54633">
        <property type="protein sequence ID" value="ADO54633"/>
        <property type="gene ID" value="PPSC2_03305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.643"/>
    <dbReference type="HOGENOM" id="CLU_2717568_0_0_9"/>
    <dbReference type="OrthoDB" id="2179596at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="72" mass="8203" checksum="619F4D6D3F7B5BEF" modified="2011-01-11" version="1">MKEFVTSIVNDSKNLANSKPFEWNTTESVDTFVKRDAVVLVNRQTNEILTFLNKKGDRLSSKLKSELDLIGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGL1</accession>
    <name>E3EGL1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peroxiredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">osmC</name>
        <name evidence="2" type="ORF">PPSC2_03395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the OsmC/Ohr family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369287.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0667"/>
    <dbReference type="EnsemblBacteria" id="ADO54650">
        <property type="protein sequence ID" value="ADO54650"/>
        <property type="gene ID" value="PPSC2_03395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.660"/>
    <dbReference type="eggNOG" id="COG1765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100275_2_1_9"/>
    <dbReference type="OMA" id="PVEYYLA"/>
    <dbReference type="OrthoDB" id="1430018at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="15894" checksum="9FB5200DEF31D516" modified="2011-01-11" version="1">MLTTFKATAKKLPEGLQVEAQSRGFKIVMDEPEDFGGTDKAMNPVEALLCALGACQSIVVAAFAESFGFSYEEFHIELEGDLDPDGFMGLADVRCGFQEIRFVMHFKTTESQEKAEAFAAFVEKTCPVGDCLANGVKLVQAGVVRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGN2</accession>
    <name>E3EGN2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yndE7</name>
        <name evidence="7" type="ORF">PPSC2_03485</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369308.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16280"/>
    <dbReference type="EnsemblBacteria" id="ADO54671">
        <property type="protein sequence ID" value="ADO54671"/>
        <property type="gene ID" value="PPSC2_03485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.681"/>
    <dbReference type="eggNOG" id="COG0531">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_0_2_9"/>
    <dbReference type="OMA" id="ISAPFMW"/>
    <dbReference type="OrthoDB" id="823978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="124"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="191"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="275"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="307"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="337"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="364" mass="40180" checksum="3F355D3AEE12DBA1" modified="2011-01-11" version="1">MARGKKTDKITTLQTTAIVVCFMLAAGLLTLPRVAVEAAKTPDAWISVILAGAATFLFGWVIVKLSSRFPESTFYQYVQRITGKFIGKGIGMLIVIYFVCIAAFEIRSVEEVTSFFLLEGTPAWAISAPFMWLSLYLCMGGVGSLGKICQLIFPVSAAIFLLICLLSLNIFELNNLRPVLSEGVMPVLRTLKTTILTLTGTESLLIILCRMEKPEKATKAIGLAIGIAVAFYTATLILCIGAFSLEGVLSRTWPFLDLARSFEVEYLLLERFESLLLTIWIMQIFATFSIAFYCASLGVSQILNSSYSKMLFILLPFIYLLSQIPKNLNELFSFGTVIGNVAFALFALLPLPLLLISYWRGARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGV9</accession>
    <name>E3EGV9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">UDP-glucose 6-dehydrogenase</fullName>
            <ecNumber evidence="4 7">1.1.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ugdH</name>
        <name evidence="12" type="ORF">PPSC2_05860</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H2O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate</text>
            <dbReference type="Rhea" id="RHEA:23596"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58052"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="1.1.1.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nucleotide-sugar biosynthesis; UDP-alpha-D-glucuronate biosynthesis; UDP-alpha-D-glucuronate from UDP-alpha-D-glucose: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.22" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369825.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18825"/>
    <dbReference type="EnsemblBacteria" id="ADO55193">
        <property type="protein sequence ID" value="ADO55193"/>
        <property type="gene ID" value="PPSC2_05860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1200"/>
    <dbReference type="eggNOG" id="COG1004">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023810_1_2_9"/>
    <dbReference type="OMA" id="YWRQVIR"/>
    <dbReference type="OrthoDB" id="647136at2"/>
    <dbReference type="UniPathway" id="UPA00038">
        <property type="reaction ID" value="UER00491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003979">
        <property type="term" value="F:UDP-glucose 6-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006065">
        <property type="term" value="P:UDP-glucuronate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028357">
        <property type="entry name" value="UDPglc_DH_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500134">
        <property type="entry name" value="UDPglc_DH_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 10" id="KW-0520">NAD</keyword>
    <keyword evidence="5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="11">
        <location>
            <begin position="311"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="150"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="247"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8">
        <location>
            <position position="258"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="153"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
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        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
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        <location>
            <position position="255"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
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        <location>
            <position position="261"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
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        <location>
            <position position="318"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
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        <location>
            <position position="325"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000874"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00004701"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00006601"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00012954"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR500134-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-3"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="442" mass="48438" checksum="1A354D84DEA5EDD5" modified="2011-01-11" version="1">MKLAVIGTGYVGLVSGVCFAQKGNEVICVDLEQYKIDMLNRAESPIYEPGIEELIALNLEAGRLEFTSDLADAVRRSDIVILAVGTPSLANGEANLSYIEQAAADVGKAMNGYKIIMTKSTVPVGTNEKIKDVVARHTSLSFDIVSAPEFLREGSAINDTLHPDRVIIGLDNTGLRETMVTLHQVFTDKIYVTDIRSAEMIKYASNAFLATKISFINEIANICEKVGADVTCVAEGMGMDKRIGSSFLQAGIGYGGSCFPKDTNALIQIAGNVDYEFKLLKSVVEVNTDQRFMIVSKLRESLGQLNGVSIGIWGLAFKPNTDDIREAPALEIVETLIQAGAIVKLYDPIAMDKFKERVDHPNIIWCSSPQQAAERSDAVCLLTDWEEFKEVDLVQLGSILHKPVLIDGRNVFTEEQIQGSGLEYYSVGRPRMSGWNRDKVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC5</accession>
    <name>E3EHC5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_09175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1944"/>
    <dbReference type="EnsemblBacteria" id="ADO55916">
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        <property type="gene ID" value="PPSC2_09175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1934"/>
    <dbReference type="eggNOG" id="COG1396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057862_2_0_9"/>
    <dbReference type="OMA" id="GVSTTWY"/>
    <dbReference type="OrthoDB" id="922937at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
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    </dbReference>
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        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
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    <dbReference type="InterPro" id="IPR041413">
        <property type="entry name" value="MLTR_LBD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17765">
        <property type="entry name" value="MLTR_LBD"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="13"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00530"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO55916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="31802" checksum="9857E078BB2CBF2B" modified="2011-01-11" version="1">MKTEARLEALSVFLKTKRARLHPHMVGLPPGSRRRTPGLRREEVAQLAGVSTTWYTWLEQGRDIKVSSSVLDAIAAALQLNTDERKYLYDLALEAGSHNLPAPAEQAIISPSLQKIVQELHYCPAIISDRRCHIVGWNEAAAHVFMDFAELPHEQRNMIELLFTKKEFKSLAVNWEHFVKGFLAIFRAYYGQYVTDPWYAQFIQNMSEAYPEFNELWNQSEVSSAPEVLIEFRHAKAGKMLFDLTSLQVQGSVDLRCSIYTPNAQTSTESKLQKLMEGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHG8</accession>
    <name>E3EHG8_PAEPS</name>
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        <submittedName>
            <fullName evidence="5">Zinc protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mlpA</name>
        <name evidence="5" type="ORF">PPSC2_10140</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the peptidase M16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22610"/>
    <dbReference type="MEROPS" id="M16.A15"/>
    <dbReference type="EnsemblBacteria" id="ADO56121">
        <property type="protein sequence ID" value="ADO56121"/>
        <property type="gene ID" value="PPSC2_10140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2137"/>
    <dbReference type="eggNOG" id="COG0612">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009902_3_3_9"/>
    <dbReference type="OMA" id="IDVVCDM"/>
    <dbReference type="OrthoDB" id="1188251at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001431">
        <property type="entry name" value="Pept_M16_Zn_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="SSF63411"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00143">
        <property type="entry name" value="INSULINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M16" evidence="3">
        <location>
            <begin position="11"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M16_C" evidence="4">
        <location>
            <begin position="170"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="419" mass="47121" checksum="005FE61A3BD6D398" modified="2011-01-11" version="1">MERIQLKNGLRVVIEKIPTVRSVSFGIWVKTGSRNETSDNSGISHFIEHMLFKGTERFSAKEIAEQFDAIGGNVNAFTSKEYTCYYAKVLDEHLPIAVDVLSDMFFNSKLDQEELAREKNVILEEISMYEDTPDDMVHDLVSRAAYGEHPLAYPILGTEDHLLAMDSSHLSHYMKEHYTIDNTVISVAGNVDDRLLELLEQHFGHFDNHGTVSPLTVPAFNGQLLYHEKATEQNHICLSLPGFAIGDDLQYAMVLLNNAIGGGMSSRLFQEIREKRGLAYSVYSYHSSHADSGMFTIYAGTAPKQTKDVLDLTLELLRDVAVNGLDANELRKGKEQLKGSLILSLESTGSRMNRLGKNELMLGQHYTLDQMIEHIEQVTADDVNKVLDRMFSEPFALSMVGASDSAVKDMRRDYFVNLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHI0</accession>
    <name>E3EHI0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370742.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22670"/>
    <dbReference type="EnsemblBacteria" id="ADO56133">
        <property type="protein sequence ID" value="ADO56133"/>
        <property type="gene ID" value="PPSC2_10200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2149"/>
    <dbReference type="eggNOG" id="COG0612">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052943_0_0_9"/>
    <dbReference type="OMA" id="VYDDKMR"/>
    <dbReference type="OrthoDB" id="1188251at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="SSF63411"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M16_C" evidence="1">
        <location>
            <begin position="184"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="426" mass="49134" checksum="AE0F6D57F362E69C" modified="2011-01-11" version="1">MNKTGFERGTRRQLRIHVLPTKRFKTFAISLYLGTPLREETVTRVGLVPFVLRRGTESYPQTTQFREQLEQLYGAGFGFDVYKRGDYQIVQFRMDTINDSFVSSPDSLLDRSFAFLGEVLTKPALENGAFQTGYVQQERENVRKKLESIVNDKIRYAGERCMEEMCKDEPYRLHPLGQRSDLDSISAQSLYEAYGEWLNNASMDLYVVGDTTLEEVEKFVDRYFQLNRSTETEYVLEQPKSVERDVQTIVERLDVNQGKLNMGLRTPITYGDERYASALMYNGILGGYPHSKLFVNVREKESLAYYASSRYDGHKGIGTIQSGIEIPNYEKAVTIIRKQLEDAQNGAITELEMTQTQAMIRNLLKEMQDSAFEMIAYDFNRQLSGKERTVEELLSQVEAVKVQDVQDAARTFRLDTIYFLRDQKGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHI1</accession>
    <name>E3EHI1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Zinc protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_10205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370743.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22675"/>
    <dbReference type="MEROPS" id="M16.A20"/>
    <dbReference type="EnsemblBacteria" id="ADO56134">
        <property type="protein sequence ID" value="ADO56134"/>
        <property type="gene ID" value="PPSC2_10205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2150"/>
    <dbReference type="eggNOG" id="COG0612">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052317_0_0_9"/>
    <dbReference type="OMA" id="FFEHLLF"/>
    <dbReference type="OrthoDB" id="1188251at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="SSF63411"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M16" evidence="1">
        <location>
            <begin position="62"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M16_C" evidence="2">
        <location>
            <begin position="181"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="426" mass="48938" checksum="6AA5CE3FB1789249" modified="2011-01-11" version="1">MEHISYEHLQETLYYEVMDNGLHVYVLPKPGFQKTYATFATKYGSVDNHFRVEGQQPVKVPDGIAHFLEHKMFEEPEGDIFATFSSNGASANAFTSFDQTVYLFSATERIQENLTTLVNFVQHPYFTDENVEKEKGIIGQEINMYEDNPDWRSYFGLIEALYKVHPVHIDIAGTIQSISTITKETLYSCYEAFYHPSNMILFVVGGVDPAEVIELVRNNQAKKDYKPQGEIERIFDDEPTTVAEPRREVKLAVSLPKLLLGFKETEVGLTGEALLRHDLETKLMLDLLFGSSTQLYQKLYDEDLISDSFGHEYNSTQQYAFSAIGGDTKDPDRLLARIREEVESIQKQGFAAEHFERARKKKIGGYLRTLNSPENIAHEFTRHRFRGSDFFQLLPVYESITLENVNRRLKDHIQWDQMAISLVVSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHQ8</accession>
    <name>E3EHQ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cystathionine gamma-synthase</fullName>
            <ecNumber evidence="4">2.5.1.48</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yrhB</name>
        <name evidence="4" type="ORF">PPSC2_11035</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the trans-sulfuration enzymes family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.48" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370926.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23425"/>
    <dbReference type="EnsemblBacteria" id="ADO56320">
        <property type="protein sequence ID" value="ADO56320"/>
        <property type="gene ID" value="PPSC2_11035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2336"/>
    <dbReference type="eggNOG" id="COG0626">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018986_2_0_9"/>
    <dbReference type="OMA" id="MQTKLIH"/>
    <dbReference type="OrthoDB" id="637281at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003962">
        <property type="term" value="F:cystathionine gamma-synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102028">
        <property type="term" value="F:cystathionine gamma-synthase activity (acts on O-phosphohomoserine)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11808">
        <property type="entry name" value="PTHR11808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00868">
        <property type="entry name" value="CYS_MET_METAB_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="376" mass="40938" checksum="06167858FCA535AB" modified="2011-01-11" version="1">MKRKTKLIHGGLPTDPHTGAVNVPIYQVSTYEQEEIGVHKGYEYSRTGNPTRFALEELIKELEEGTRGFAFGSGMAAIHAVFSLFKAGDHILLTDDVYGGTYRIVSKVLSRIGIESTFVDTTDLEAISKAIRPNTKALYVETPTNPLLKVTDIRAVSELVKKHELLLIVDNTFATPYWQTPITLGADIVVHSATKYLGGHSDVVAGLAVVNSEELGEQLHFLQNAIGGILGPQDSWLLIRGIKTLGLRMEAIEKNAKEIAAFLEKHPKVSKVYYPGLESHAQHELSKIQAEGFGGIISFDVGSDANAVALLKKVKYFTLAESLGAVESLISVPARMTHASIPAERRAELGITEGLVRISVGIEDLEDLIEDLQSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHW2</accession>
    <name>E3EHW2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gerA2</name>
        <name evidence="7" type="ORF">PPSC2_11670</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371059.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24055"/>
    <dbReference type="EnsemblBacteria" id="ADO56454">
        <property type="protein sequence ID" value="ADO56454"/>
        <property type="gene ID" value="PPSC2_11670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2469"/>
    <dbReference type="eggNOG" id="COG0531">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_1_2_9"/>
    <dbReference type="OMA" id="YQIGSAY"/>
    <dbReference type="OrthoDB" id="842200at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="71"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="119"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="145"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="181"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="268"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="302"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="333"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="366" mass="41748" checksum="7119BBC767F7DA2E" modified="2011-01-11" version="1">MNSNLTVRQAIMWFALYQIGSAYLVLPAAITAAAKQDAWLSIPISLGFYLLLIPLYTSIARQIQGKSFVEYLRCLFGPLGATISIVFIFFFPFLVFIMTLRNLGDFITIAIMPETPPDAIYFIMLIVIYFAVRSGPVVIGRCAEILFFFLLVLYLLVRITLLPESKIDNVLPIFEYGLNPIVLASFNLFAFPYLEAFLYLFFAQYIPDPKKWRKTVITSALISGGMYFLMVLQIIAVMSEGVVSNLTFPTFFINRTISSGEFLQRFEIFVAVFWFVTIFFRLALLLYVSAQGLADAFRLRNANSLLVPLILIAIAMVHSIWPNMQFINKFFSVWPFYAMIFGIVFPIVLWLVGKLGGSLKLRKKYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI15</accession>
    <name>E3EI15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RNA polymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sigW7</name>
        <name evidence="4" type="ORF">PPSC2_12365</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371208.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2635"/>
    <dbReference type="EnsemblBacteria" id="ADO56604">
        <property type="protein sequence ID" value="ADO56604"/>
        <property type="gene ID" value="PPSC2_12365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2623"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_1_9"/>
    <dbReference type="OMA" id="VRRFFLH"/>
    <dbReference type="OrthoDB" id="1914729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="2">
        <location>
            <begin position="22"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="3">
        <location>
            <begin position="110"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="20123" checksum="926960F0C4672CB3" modified="2011-01-11" version="1">MDLTEKAELATQGDKEAFVDVIRAVQQSLYVIARSIVKNEEDCADAIQETIAKAFSNVHRLKEPAYFKTWIIRILINECNRIIRKKKRVSPVPYDIRKSSYKSDYEQIELFEVIDGLDEQLQTTVTLFYIEDLSVKEISKVLNVSEGTVKSRLFRARQQLSELALGEGEAKYELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI58</accession>
    <name>E3EI58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-878</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-878</name>
        <name evidence="1" type="ORF">PPSC2_03740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369362.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0743"/>
    <dbReference type="EnsemblBacteria" id="ADO54726">
        <property type="protein sequence ID" value="ADO54726"/>
        <property type="gene ID" value="PPSC2_03740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.736"/>
    <dbReference type="eggNOG" id="ENOG503498Q">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2317567_0_0_9"/>
    <dbReference type="OMA" id="LFIRIQM"/>
    <dbReference type="OrthoDB" id="1706427at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11531" checksum="BE7AD542B9D9CE32" modified="2011-01-11" version="1">MHADVQNLFIRIQMLSYAHQDDLTVRDIQPVLEERGYRVGEREVKQELENLTQENFLTPHDDMFSLTGAGIEELQEIQSMLGVLYEDVVKNPAQVAARASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI93</accession>
    <name>E3EI93_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">YndE9</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yndE9</name>
        <name evidence="4" type="ORF">PPSC2_03885</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0778"/>
    <dbReference type="EnsemblBacteria" id="ADO54761">
        <property type="protein sequence ID" value="ADO54761"/>
        <property type="gene ID" value="PPSC2_03885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.769"/>
    <dbReference type="HOGENOM" id="CLU_2480462_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="87" mass="9994" checksum="D8DA5A575C20B501" modified="2011-01-11" version="1">MKELFIRTAKETVQDEIKKIVLQSLSKLQKEMKADVAGFGSKVKVNYPAYWDRVKDNWQDTFSEIPIDVRVEVQIERTGAYTKGEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI99</accession>
    <name>E3EI99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369844.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18915"/>
    <dbReference type="EnsemblBacteria" id="ADO55212">
        <property type="protein sequence ID" value="ADO55212"/>
        <property type="gene ID" value="PPSC2_05950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1218"/>
    <dbReference type="eggNOG" id="ENOG50315AK">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137932_0_0_9"/>
    <dbReference type="OMA" id="NHFGVDT"/>
    <dbReference type="OrthoDB" id="1487779at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="19440" checksum="9BF05CDF296FAA2C" modified="2011-01-11" version="1">MLLRRRAASAFVRKLLYFAILCGLLWLLWMGLRGVMSTGEGDQAVEALNEFYTMEQSGNFGGSWELFHSQMKKKFEKSTYVQQRAHVFMQDMGTDTFTFELGEPQAEYDIRTDPNGEDLGKVYRITVTQHYKTRFGNFDIVQPCYVTQEDEEWRVLWIYKEKEQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIV3</accession>
    <name>E3EIV3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yitG</name>
        <name evidence="10" type="ORF">PPSC2_09435</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370589.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21905"/>
    <dbReference type="EnsemblBacteria" id="ADO55972">
        <property type="protein sequence ID" value="ADO55972"/>
        <property type="gene ID" value="PPSC2_09435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1990"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_6_9"/>
    <dbReference type="OMA" id="TANTFGK"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="73"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="101"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="173"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="217"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="251"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="285"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="310"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="344"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="373"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="7"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="398"/>
            <end position="438"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="438" mass="47196" checksum="C436D2429B11E615" modified="2011-01-11" version="1">MQQNKGNLVALGSIPLMMTLGNSMLIPVLPEIGRKLHVSSFRISMLITVYAVVAILLIPIAGYLSDRFGRKAVIVPCLILTVIGGGISAVGAWLLHDLAAYWTIIAGRLLQGAGAAGAFPIVIPLVGDLYENEDEASKNLGVVETYNTFGKVLSPILGAALGAMLWFLPLAVIPGLCLISLILVIWLIHVPKRKNQPIMFREFVGNVKQVLVEKGRWLYAIFAMGGICMFVIFGVLFYLSDILESRYNLHGVWKGFVLAIPLISLCLCSYLGGKVIGKHKKRMKWIGFGGLAILTISFAILGFFQHIYAVISLFTLGGGGIGLALPCLDALITKGIEKEERGTITSLYSSMRFVGVSLGPPVVSLLIGRSGHGLLFGVMAAVGGVAALLMLFAVKPEQDEPAGDKSSDRSNKSEGMTYISREKPPSSKLRHKTPAKYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ66</accession>
    <name>E3EJ66_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Glutamate racemase</fullName>
            <ecNumber evidence="2 7">5.1.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">murI</name>
        <name evidence="8" type="synonym">murI3</name>
        <name evidence="8" type="ORF">PPSC2_10685</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Provides the (R)-glutamate required for cell wall biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>L-glutamate = D-glutamate</text>
            <dbReference type="Rhea" id="RHEA:12813"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:29986"/>
            <dbReference type="EC" id="5.1.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the aspartate/glutamate racemases family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.3" evidence="2 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370853.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23080"/>
    <dbReference type="EnsemblBacteria" id="ADO56247">
        <property type="protein sequence ID" value="ADO56247"/>
        <property type="gene ID" value="PPSC2_10685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2263"/>
    <dbReference type="eggNOG" id="COG0796">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052344_1_0_9"/>
    <dbReference type="OMA" id="THYPFYK"/>
    <dbReference type="OrthoDB" id="1718671at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008881">
        <property type="term" value="F:glutamate racemase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00258">
        <property type="entry name" value="Glu_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001920">
        <property type="entry name" value="Asp/Glu_race"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018187">
        <property type="entry name" value="Asp/Glu_racemase_AS_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004391">
        <property type="entry name" value="Glu_race"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53681">
        <property type="entry name" value="SSF53681"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00067">
        <property type="entry name" value="glut_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00923">
        <property type="entry name" value="ASP_GLU_RACEMASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="24"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="56"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="88"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="200"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="31948" checksum="F0F5EC0C09D73F16" modified="2011-01-11" version="1">MVPARYNTIVERKKVSSLKIGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVQTILKEDIKALVIACNTATSIAVAELRKEYKFPIIGMEPAVKPAVEMNRANGKRVLVLATPLTLKQSGYAALVSRVDDHGSVDSLPLPELVQYCEQLNFDRTELFNYFNHKLSSFNLDIYGTVVLGCTHYPFYKEILRELLPSHIQLIDGSHGTVKRLKQVLSERNLLASPVKVGQPQEGHVTFLCTSQDETYVHKMERALEIYAEHEKIYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJI1</accession>
    <name>E3EJI1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yurM5</name>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
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        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
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            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
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        <property type="protein sequence ID" value="ADO56531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    </dbReference>
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        <property type="protein sequence ID" value="ADO56531"/>
        <property type="gene ID" value="PPSC2_12040"/>
    </dbReference>
    <dbReference type="GeneID" id="66577533"/>
    <dbReference type="KEGG" id="ppm:PPSC2_12040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2547"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
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        <property type="component" value="Chromosome"/>
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    </dbReference>
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        <property type="entry name" value="MetI-like"/>
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        <location>
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            <end position="264"/>
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            <begin position="73"/>
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        </location>
    </feature>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO56531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="31876" checksum="355A43E0CC420575" modified="2011-01-11" version="1">MSKTALSKFRHAALQIPLWLYLIVSVYPLFWMVSYSLKNNDEIFVSNPFGLPTHFRYENYINAWTQFNIPRYFLNSLVVSTISTLFILLLALMFAFAVARMRWRFRSTVRTYMTIGMFMPLQVIMIPLAILVRDFNLTNTYGALILPYIAIGLPFSSMIFYGFLTGIPKEIEEAACMDGANIYRLFLKIIVPLALPAIATVAIFQFLNNWNEFTLAYILISDENMKTLPLGLLFFQGSYSTDWGAMGAVMTIASLPMVLVYLFLSEQVERAMTVGSAVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
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                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
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        </source>
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            <end position="30"/>
        </location>
    </feature>
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        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO59656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="15769" checksum="351D752C10C82B32" modified="2011-01-11" version="1">MVNSKLKKIGVISAIFVTLTIIFVCSYQVYQNVETVHNYISPKMTSVMAIEKETDEWNKVKFDDQDSIKFDSVFWDKTIINDANSTGNALMRVKDVKGVVIDEFQVSPGNSKQLSGLNKDQKYFFEIKASKGQFIINAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
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    <name>E3EJR1_PAEPS</name>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
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        <property type="gene ID" value="PPSC2_26825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5670"/>
    <dbReference type="HOGENOM" id="CLU_2438064_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10189" checksum="093BBD3C07143B42" modified="2011-01-11" version="1">MKMAFFRPNKLNEMMNEIFQTKNTSNYCEVEYSEKLETDAILTYSEDGRLVSEQPLTDALSAISNALNIPVTKYDVIEVGDFGDGFAFFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJS0</accession>
    <name>E3EJS0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">NfeD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_26775</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        </lineage>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
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            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0277"/>
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        <property type="protein sequence ID" value="ADO59668"/>
        <property type="gene ID" value="PPSC2_26775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5660"/>
    <dbReference type="eggNOG" id="COG1585">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116732_2_1_9"/>
    <dbReference type="OMA" id="AMPEFGM"/>
    <dbReference type="OrthoDB" id="1951939at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002810">
        <property type="entry name" value="NfeD-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01957">
        <property type="entry name" value="NfeD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="NfeD" evidence="3">
        <location>
            <begin position="52"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="15559" checksum="DD9EF871C4EC907E" modified="2011-01-11" version="1">MNALIWIMVFVLGVLVELFTTTFVALCFSVGSVFGFLTLLLHAPLVVQILSFLIATGLAIWLLKPLRDRYLSKDIVKTNVDALIGEWGIVMEPISNLDFRGAVKVKGITYSARSENGEEIPTGTQVIVNRVEGVKFYVSPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKD0</accession>
    <name>E3EKD0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385871.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59457">
        <property type="protein sequence ID" value="ADO59457"/>
        <property type="gene ID" value="PPSC2_27780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5886"/>
    <dbReference type="HOGENOM" id="CLU_1757035_0_0_9"/>
    <dbReference type="OrthoDB" id="2063919at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="16948" checksum="3F1DF8B74C1CADD6" modified="2011-01-11" version="1">MEKAIIYSFESGRRLDFGEKKEPEKKRVRILWNRIILALVLITLLIYGTCSLVADLIDVVPKWINTQLQYSISQDIQNYQQVKVIIQSGDTAWKIQSKLTPNERDIRHPLYLAQSLNPGVQMGDLKAGQIIIFLKEKEIKALTANASH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKF6</accession>
    <name>E3EKF6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59483">
        <property type="protein sequence ID" value="ADO59483"/>
        <property type="gene ID" value="PPSC2_27665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5860"/>
    <dbReference type="HOGENOM" id="CLU_1935978_0_0_9"/>
    <dbReference type="OMA" id="ADHEDNK"/>
    <dbReference type="OrthoDB" id="2131822at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="15040" checksum="B78217727AB8D7DC" modified="2011-01-11" version="1">MNDFIKSAKQMMETDLELIEILKEYKNELGITPISQTLLSKKLRISQSNVSYRLRRLIKYGAIEKIRPGQYRIISEDVKHTPYGLVFQLIAFLENHVDSYRDLTAQSEALGVKLSDIQQAWGFINNSFKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKR9</accession>
    <name>E3EKR9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27495</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385934.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0126"/>
    <dbReference type="EnsemblBacteria" id="ADO59520">
        <property type="protein sequence ID" value="ADO59520"/>
        <property type="gene ID" value="PPSC2_27495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5819"/>
    <dbReference type="HOGENOM" id="CLU_908647_0_0_9"/>
    <dbReference type="OMA" id="IFNEVAI"/>
    <dbReference type="OrthoDB" id="2118841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="306" mass="35908" checksum="D2D7BD4ACD0AD50E" modified="2011-01-11" version="1">MYLKQRDEELVIVPADLKQTFQNKFTLNIGKNEIIKMKDNNVITDRDLKIAKFLFRFKFATAEQIHKYLGEESSKVNIKNRLDKLVNYRVLNKFMLSEFEEERIAADAFEIYCLDLGGRYLLSHYSNEDTTDWYSTVNMKTSEIISKNLVVSEFYIRIMQTCGSKIVYFKPEPELRVGKKNVIPSFEMCMQSNGITKYFIGEIVREYDFPIFIREKAVKLESLLNTNAWKKYYYDSESEPVLFMFADSDLTALETGKLLTETTEIRNFRLSTDERIGRELYDTGAFLKYVEDKDSLQEIKAGTFKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKX4</accession>
    <name>E3EKX4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386293.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0490"/>
    <dbReference type="EnsemblBacteria" id="ADO59879">
        <property type="protein sequence ID" value="ADO59879"/>
        <property type="gene ID" value="PPSC2_25770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5421"/>
    <dbReference type="HOGENOM" id="CLU_2383431_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="11019" checksum="66ADD58A49C03B1D" modified="2011-01-11" version="1">MIEYEKAKFMLERWLKYDASHSFPKGVPDYPTNTAFIKAINEELTKDMDRIVLNTLDAKQSRIHGRLILLNVLRRYTHGTTYTAEEILSIMIDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELB4</accession>
    <name>E3ELB4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386360.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0557"/>
    <dbReference type="EnsemblBacteria" id="ADO59946">
        <property type="protein sequence ID" value="ADO59946"/>
        <property type="gene ID" value="PPSC2_28450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6035"/>
    <dbReference type="eggNOG" id="ENOG50307IH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1110558_0_0_9"/>
    <dbReference type="OrthoDB" id="2189633at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="71"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="250" mass="28948" checksum="735027AFFF355D2B" modified="2011-01-11" version="1">MSYVKMFEMVKNEMIEVLEDTTLDNFPEKIDVLSAHIDLMHSLTRLTFYKQNESVSNELLTDKMNADVSLNSSESKGDFESLQETQDTKFSTEEPIKDLPPSLKDDGGRSMYLFERKLEGGYVAKINGYVPEAIIRKQGLQHHDYVYAQEIESSGERKRFLYSLAKRAEESAPTDRVQISLCMLESRGKQLIVRESMDSTGEDFFKKHPNLEFVIQERDITRLFLEEGDLVDIAFYEGNIENQKVIWVHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELD0</accession>
    <name>E3ELD0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA_LIGASE_A3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386376.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0573"/>
    <dbReference type="EnsemblBacteria" id="ADO59962">
        <property type="protein sequence ID" value="ADO59962"/>
        <property type="gene ID" value="PPSC2_28365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6016"/>
    <dbReference type="eggNOG" id="COG1793">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008325_4_0_9"/>
    <dbReference type="OMA" id="RWAYETK"/>
    <dbReference type="OrthoDB" id="1073940at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003910">
        <property type="term" value="F:DNA ligase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012310">
        <property type="entry name" value="DNA_ligase_ATP-dep_cent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01068">
        <property type="entry name" value="DNA_ligase_A_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_LIGASE_A3" evidence="1">
        <location>
            <begin position="19"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="33505" checksum="A37D2E014C8D1759" modified="2011-01-11" version="1">MLNKPFRPMILQKSEKVPSDKRFLHQYKWDGHRLLFHYDRGKVRLFTREMNECTHQYPELQSIQLPVESCILDGECIVLDPLLSPPMPCFESVMTRFHASKEISIQKYMNSLPAHFVVWDMVFLNGKPIHQLALTKRLELLEDVVAPDSRISITPSYDDGEMLFENITKIGGEGVVSKPKESKYKFGSCSDHNAWYKTKNYQYEIVEIGGIRKAKFGWSLLHKGKYVGVLEFPPPKEISKAFFKVAKQIVIKETMEWITLEPILRCKVKFQCYSKSGKMRSPSFIEFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC14</accession>
    <name>A0A0D5ZC14_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_01240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885840.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44178">
        <property type="protein sequence ID" value="AKA44178"/>
        <property type="gene ID" value="PPSC2_01240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.241"/>
    <dbReference type="HOGENOM" id="CLU_2827133_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="66" mass="7586" checksum="1523B0A18351516B" modified="2015-05-27" version="1">MTESNKSDVKPKLRDLPSIKEAEHQANNLKMVKAAMPVLSPFLKMLGVDSELIKKHFKKQRIVWVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCW0</accession>
    <name>A0A0D5ZCW0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44391">
        <property type="protein sequence ID" value="AKA44391"/>
        <property type="gene ID" value="PPSC2_28130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5963"/>
    <dbReference type="HOGENOM" id="CLU_2524441_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9981" checksum="2A951FFA58CC8B09" modified="2015-05-27" version="1">MILMWIGGYLLVGLIFTFGVYLYYKLSGRETDSGLFPIPEWVVFTTAVILFPLNIMLQLREWRYRRECRRVKLQVDKECKSSVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCW5</accession>
    <name>A0A0D5ZCW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44367">
        <property type="protein sequence ID" value="AKA44367"/>
        <property type="gene ID" value="PPSC2_26860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5677"/>
    <dbReference type="HOGENOM" id="CLU_1561408_0_0_9"/>
    <dbReference type="OrthoDB" id="2139458at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="19980" checksum="5D2965BD8CEFD627" modified="2015-05-27" version="1">MDVIHVELYGGKGLFGGREQPLEASVIRCDKYKSCSYYENNQCLKVRSIGGSTCRFGEEDTVRGYTSKAKKYHQFKRSWKEHEQYRKLGKPSAKLGHIDNFVVFPYPYIHIKEQEDGEIKISDPLMFSDKTAFIPWERFTPELIHRICTFRPEAVMGGEIMEYRKKIVPML</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E489</accession>
    <name>E3E489_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371233.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2660"/>
    <dbReference type="EnsemblBacteria" id="ADO56629">
        <property type="protein sequence ID" value="ADO56629"/>
        <property type="gene ID" value="PPSC2_12495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2649"/>
    <dbReference type="eggNOG" id="COG0596">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_35_0_9"/>
    <dbReference type="OMA" id="GKHDPFF"/>
    <dbReference type="OrthoDB" id="1890883at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="25"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="282" mass="32532" checksum="5139DE037E4D8DB8" modified="2011-01-11" version="1">MRAYHSLEIEGLNVFYREAGNPNKPVILLLHGFPSASHMFRELIPILEKDYYLIAPDYPGFGNTSSPDREDFQYTFDHITEIIETFIDKLGLTKYALYVFDYGAPIGFRIAKHHPERVTAIISQNGNIYREGLGGKWAAREDYWRYPTQEKRESYRTAFAPNTIKGQYVDGTKESQVSPDGYTLDIAYMSRPGNDEKQLDLIFDYQNNVKMYPEFQQYLREYQPPLLAVWGENDVSFIPAGAEAFKKDLPKAEIHLLDTGHFALETHAYEIGELMLDFLGKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4I8</accession>
    <name>E3E4I8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Acireductone dioxygenase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase</fullName>
            <shortName evidence="8">DHK-MTPene dioxygenase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Acireductone dioxygenase (Fe(2+)-requiring)</fullName>
            <shortName evidence="8">ARD'</shortName>
            <shortName evidence="8">Fe-ARD</shortName>
            <ecNumber evidence="8">1.13.11.54</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Acireductone dioxygenase (Ni(2+)-requiring)</fullName>
            <shortName evidence="8">ARD</shortName>
            <shortName evidence="8">Ni-ARD</shortName>
            <ecNumber evidence="8">1.13.11.53</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mtnD</name>
        <name evidence="9" type="synonym">ykrZ</name>
        <name evidence="9" type="ORF">PPSC2_13705</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4-methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + O2 = 3-(methylsulfanyl)propanoate + CO + formate + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:14161"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:17245"/>
            <dbReference type="ChEBI" id="CHEBI:49016"/>
            <dbReference type="ChEBI" id="CHEBI:49252"/>
            <dbReference type="EC" id="1.13.11.53"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + O2 = 4-methylsulfanyl-2-oxobutanoate + formate + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:24504"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:16723"/>
            <dbReference type="ChEBI" id="CHEBI:49252"/>
            <dbReference type="EC" id="1.13.11.54"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="8">Binds 1 Fe(2+) cation per monomer.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </cofactor>
        <text evidence="8">Binds 1 nickel ion per monomer.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 5/6.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the acireductone dioxygenase (ARD) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.54" evidence="8"/>
    <dbReference type="EC" id="1.13.11.53" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371490.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01395"/>
    <dbReference type="EnsemblBacteria" id="ADO56887">
        <property type="protein sequence ID" value="ADO56887"/>
        <property type="gene ID" value="PPSC2_13705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2916"/>
    <dbReference type="eggNOG" id="COG1791">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_125400_0_0_9"/>
    <dbReference type="OMA" id="TTHWFDM"/>
    <dbReference type="OrthoDB" id="1964262at2"/>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00878"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010308">
        <property type="term" value="F:acireductone dioxygenase (Ni2+-requiring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010309">
        <property type="term" value="F:acireductone dioxygenase [iron(II)-requiring] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019284">
        <property type="term" value="P:L-methionine salvage from S-adenosylmethionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02232">
        <property type="entry name" value="cupin_ARD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01682">
        <property type="entry name" value="Salvage_MtnD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004313">
        <property type="entry name" value="ARD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023956">
        <property type="entry name" value="ARD_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23418">
        <property type="entry name" value="PTHR23418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03079">
        <property type="entry name" value="ARD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4 8 9" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6 8" id="KW-0408">Iron</keyword>
    <keyword evidence="3 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="1 8" id="KW-0533">Nickel</keyword>
    <keyword evidence="5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="8">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <feature type="site" description="May play a role in transmitting local conformational changes" evidence="8">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <feature type="site" description="Important to generate the dianion" evidence="8">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="20723" checksum="A7F13123F8C88D20" modified="2011-01-11" version="1">MAEIFIRNTNERISGEEQVREFLESHQVLYEHWDASKLPRELQENFTLTDDQKAAVLKTFEPEIKDLAARRGYKIWDVITLSEATPKLDELLAKFEQIHTHTEDEIRAIVAGKGIFIIKGSEEIGYFNVELSPGDVISVPENTPHFFTLMENQKIVAVRLFIEENGWIAEPFEDPTFTTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4J8</accession>
    <name>E3E4J8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371499.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01455"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56897">
        <property type="protein sequence ID" value="ADO56897"/>
        <property type="gene ID" value="PPSC2_13750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2927"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025996_0_4_9"/>
    <dbReference type="OMA" id="FNHMTVM"/>
    <dbReference type="OrthoDB" id="865276at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="5"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="33335" checksum="39E3598F48027BEB" modified="2011-01-11" version="1">MPRASVILPVYNNAAFVLEAIHSILTQTYSDFELIVIDDGSTDGSTFLISQISDPRVIKIFHSTNRGLIASLNEGLKKANGEYIVRMDSDDISTPDRLAVQIAFMDQNPLVDVCGAAFTSSSGGSIKVNPASHDEIKTWLLFHCCICHPAVIMRNSMIRRLGIQYDSNYPHAEDYELWNRLAFQVQMANLPINVLYYRQHNGQVSNQHKAIQDATARRIRQRQFSKLGLELSDEENQIMLDILEFKINPYDYGSYTRALGFANWVLDQNSKYLVYNQEMLNIAFSRCISHIPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S5</accession>
    <name>E3E4S5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ypjC</name>
        <name evidence="9" type="ORF">PPSC2_14485</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371651.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02135"/>
    <dbReference type="EnsemblBacteria" id="ADO57053">
        <property type="protein sequence ID" value="ADO57053"/>
        <property type="gene ID" value="PPSC2_14485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3091"/>
    <dbReference type="eggNOG" id="COG1284">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063199_1_1_9"/>
    <dbReference type="OMA" id="WHKPGRY"/>
    <dbReference type="OrthoDB" id="1747063at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019264">
        <property type="entry name" value="DUF2179"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003740">
        <property type="entry name" value="YitT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10035">
        <property type="entry name" value="DUF2179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02588">
        <property type="entry name" value="YitT_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006483">
        <property type="entry name" value="Membrane_protein_YitT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="44"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="117"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="158"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2179" evidence="8">
        <location>
            <begin position="229"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF10035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="32126" checksum="ACC9C7A37DE943F4" modified="2011-01-11" version="1">MKISKSMEQLKLILPIVFGTAIYAFGLLYFIIPSKLMEGGITGITLLLNYAFSISPSLSTLFLNIPLFLIGWKMLGGKQIIYTGVGIGSLTFFLWLFEKMIHFGWMGTFQTEHDFILSSLYAGVTLGAGLGIVFRFGGTTGGSDIIARILNRKFGWSMGRIMLVIDIVIIGASLLYIPKEKILYTLVAVFIASKIIDFIQEGAYSARAFMIISDHTMDIADIITRDMDRGVTIIPAVGAFSKQAKHVAYCVVSRQEIRRLHQIVKSVDPRAFIIIQDVHDVHGEGFKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U5</accession>
    <name>E3E4U5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Chorismate mutase AroH</fullName>
            <ecNumber evidence="1">5.4.99.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">aroH</name>
        <name evidence="4" type="ORF">PPSC2_14580</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>chorismate = prephenate</text>
            <dbReference type="Rhea" id="RHEA:13897"/>
            <dbReference type="ChEBI" id="CHEBI:29748"/>
            <dbReference type="ChEBI" id="CHEBI:29934"/>
            <dbReference type="EC" id="5.4.99.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Metabolic intermediate biosynthesis; prephenate biosynthesis; prephenate from chorismate: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="5.4.99.5" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371670.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02230"/>
    <dbReference type="EnsemblBacteria" id="ADO57073">
        <property type="protein sequence ID" value="ADO57073"/>
        <property type="gene ID" value="PPSC2_14580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3111"/>
    <dbReference type="eggNOG" id="COG4401">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133236_1_0_9"/>
    <dbReference type="OMA" id="CIRVMMT"/>
    <dbReference type="OrthoDB" id="2021052at2"/>
    <dbReference type="UniPathway" id="UPA00120">
        <property type="reaction ID" value="UER00203"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004106">
        <property type="term" value="F:chorismate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046417">
        <property type="term" value="P:chorismate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02185">
        <property type="entry name" value="AroH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008243">
        <property type="entry name" value="Chorismate_mutase_AroH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21164">
        <property type="entry name" value="PTHR21164"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07736">
        <property type="entry name" value="CM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005965">
        <property type="entry name" value="Chor_mut_AroH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01796">
        <property type="entry name" value="CM_mono_aroH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51167">
        <property type="entry name" value="CHORISMATE_MUT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2 3" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1 2 3" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <position position="7"/>
        </location>
        <ligand>
            <name>prephenate</name>
            <dbReference type="ChEBI" id="CHEBI:29934"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>prephenate</name>
            <dbReference type="ChEBI" id="CHEBI:29934"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>prephenate</name>
            <dbReference type="ChEBI" id="CHEBI:29934"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR005965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR005965-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="124" mass="13815" checksum="974AFAE301AC78CF" modified="2011-01-11" version="1">MYNRGIRGATTVANNEANEILEATSQLLEEIVSYNEIQPDDISNVWITVTHDLDAAFPAMAIRQLDGWDMVPLMCALEIPVAGSLPKCIRLMVQVNTDKSQREMKHVYLNGAQMLRPDLASQGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4W7</accession>
    <name>E3E4W7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371692.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02325"/>
    <dbReference type="EnsemblBacteria" id="ADO57096">
        <property type="protein sequence ID" value="ADO57096"/>
        <property type="gene ID" value="PPSC2_14680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3133"/>
    <dbReference type="eggNOG" id="ENOG503413D">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116697_0_0_9"/>
    <dbReference type="OMA" id="IYADIHA"/>
    <dbReference type="OrthoDB" id="1856725at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24362" checksum="3958AFF45C3B32EE" modified="2011-01-11" version="1">MLKEAISSVLVDRLPHDLAVALGSLTESWSAVSVPWMLGGSCALLVQEVELDRLPRDIDIYADIHAAKLLHAHSPGVSIDQQQVDRSGSYVSLLSHYELEGFPVELVGGFEVLCDGALYRLEVERLLWSAGIQLDLENTSLRLMPLSHELLFNLLRNRPDRYQAIANVMKRDPQRHIGILKQLLVSNIWNKEQLGKLGELLPWPELHSFIRMSNEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E551</accession>
    <name>E3E551_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Coenzyme A biosynthesis bifunctional protein CoaBC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">DNA/pantothenate metabolism flavoprotein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Phosphopantothenoylcysteine synthetase/decarboxylase</fullName>
            <shortName evidence="3">PPCS-PPCDC</shortName>
        </alternativeName>
        <domain>
            <recommendedName>
                <fullName evidence="3">Phosphopantothenoylcysteine decarboxylase</fullName>
                <shortName evidence="3">PPC decarboxylase</shortName>
                <shortName evidence="3">PPC-DC</shortName>
                <ecNumber evidence="3">4.1.1.36</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="3">CoaC</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="3">Phosphopantothenate--cysteine ligase</fullName>
                <ecNumber evidence="3">6.3.2.5</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="3">CoaB</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="3">Phosphopantothenoylcysteine synthetase</fullName>
                <shortName evidence="3">PPC synthetase</shortName>
                <shortName evidence="3">PPC-S</shortName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="7" type="primary">dfp</name>
        <name evidence="3" type="synonym">coaBC</name>
        <name evidence="7" type="ORF">PPSC2_15450</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes two sequential steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine. In the second step the latter compound is decarboxylated to form 4'-phosphopantotheine.</text>
    </comment>
    <comment type="function">
        <text evidence="4">Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>(R)-4'-phosphopantothenate + CTP + L-cysteine = CMP + diphosphate + H(+) + N-[(R)-4-phosphopantothenoyl]-L-cysteine</text>
            <dbReference type="Rhea" id="RHEA:19397"/>
            <dbReference type="ChEBI" id="CHEBI:10986"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:59458"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="6.3.2.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>H(+) + N-[(R)-4-phosphopantothenoyl]-L-cysteine = (R)-4'-phosphopantetheine + CO2</text>
            <dbReference type="Rhea" id="RHEA:16793"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:59458"/>
            <dbReference type="ChEBI" id="CHEBI:61723"/>
            <dbReference type="EC" id="4.1.1.36"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="3">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 2/5.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 3/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">In the C-terminal section; belongs to the PPC synthetase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">In the N-terminal section; belongs to the HFCD (homo-oligomeric flavin containing Cys decarboxylase) superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.36" evidence="3"/>
    <dbReference type="EC" id="6.3.2.5" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371849.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03100"/>
    <dbReference type="EnsemblBacteria" id="ADO57259">
        <property type="protein sequence ID" value="ADO57259"/>
        <property type="gene ID" value="PPSC2_15450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3301"/>
    <dbReference type="eggNOG" id="COG0452">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033319_0_1_9"/>
    <dbReference type="OMA" id="LDMIVAN"/>
    <dbReference type="OrthoDB" id="1346419at2"/>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00353"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004632">
        <property type="term" value="F:phosphopantothenate--cysteine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004633">
        <property type="term" value="F:phosphopantothenoylcysteine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015941">
        <property type="term" value="P:pantothenate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02225">
        <property type="entry name" value="CoaBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035929">
        <property type="entry name" value="CoaB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005252">
        <property type="entry name" value="CoaBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007085">
        <property type="entry name" value="DNA/pantothenate-metab_flavo_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036551">
        <property type="entry name" value="Flavin_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003382">
        <property type="entry name" value="Flavoprotein"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04127">
        <property type="entry name" value="DFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02441">
        <property type="entry name" value="Flavoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102645">
        <property type="entry name" value="SSF102645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52507">
        <property type="entry name" value="SSF52507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00521">
        <property type="entry name" value="coaBC_dfp"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 4" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="3 4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 4" id="KW-0288">FMN</keyword>
    <keyword evidence="3 4" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 3 4" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavoprotein" evidence="5">
        <location>
            <begin position="7"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="DFP" evidence="6">
        <location>
            <begin position="218"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphopantothenoylcysteine decarboxylase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphopantothenate--cysteine ligase" evidence="3">
        <location>
            <begin position="223"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="3">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="311"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="321"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="355"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="369"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="373"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="434" mass="46831" checksum="9E086BDD8BF0AF60" modified="2011-01-11" version="1">MLKGKVIILGITGGIAAYKGAALCSKLTQKGADVHVIMTASAKEFITELTLQSLSRNPVYSDTFDEREPSIVSHIHLADAADLVLVAPATANIIGKMAHGLADDMLSTTLLATTAPIMVAPAMNVHMYTHPAVMQNMETLVSRGVKMIEPGEGLLACGYVGKGRLEEPETIVQTIERFFDQQALEPEAAIKSESRWFGEESTENQVTEPLVNKNELALSGKKVIVTAGGTIERIDPVRYITNDSSGKMGFAIAKVAQEMGAEVHLIAANTSAEPPSGISLERVQSAEDMYQAVLKQWETSDMVVMAAAVADYRPREVAQTKIKKKDSVFTLELVKNVDILESLGRSKKHQFLIGFAAETGNLETYAIDKLERKNCDLLAANDVTTDGAGFGVDTNAVQIYDRSGMVEQIPVQSKEEVARKLLTLAAGRMGGVLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5C0</accession>
    <name>E3E5C0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Aspartate carbamoyltransferase</fullName>
            <ecNumber evidence="5">2.1.3.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Aspartate transcarbamylase</fullName>
            <shortName evidence="5">ATCase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">pyrB</name>
        <name evidence="9" type="ORF">PPSC2_16495</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>carbamoyl phosphate + L-aspartate = H(+) + N-carbamoyl-L-aspartate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20013"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:32814"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="EC" id="2.1.3.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.2" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372066.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03830"/>
    <dbReference type="EnsemblBacteria" id="ADO57480">
        <property type="protein sequence ID" value="ADO57480"/>
        <property type="gene ID" value="PPSC2_16495"/>
    </dbReference>
    <dbReference type="GeneID" id="66576747"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3521"/>
    <dbReference type="eggNOG" id="COG0540">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043846_2_1_9"/>
    <dbReference type="OMA" id="FPTEREY"/>
    <dbReference type="OrthoDB" id="1844275at2"/>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004070">
        <property type="term" value="F:aspartate carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1370">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00001">
        <property type="entry name" value="Asp_carb_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006132">
        <property type="entry name" value="Asp/Orn_carbamoyltranf_P-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006130">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036901">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002082">
        <property type="entry name" value="Asp_carbamoyltransf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006131">
        <property type="entry name" value="Asp_carbamoyltransf_Asp/Orn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11405:SF16">
        <property type="entry name" value="PTHR11405:SF16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00185">
        <property type="entry name" value="OTCace"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02729">
        <property type="entry name" value="OTCace_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00100">
        <property type="entry name" value="AOTCASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53671">
        <property type="entry name" value="SSF53671"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00670">
        <property type="entry name" value="asp_carb_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00097">
        <property type="entry name" value="CARBAMOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="OTCace_N" evidence="8">
        <location>
            <begin position="11"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="OTCace" evidence="7">
        <location>
            <begin position="157"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="304" mass="33973" checksum="25B9134343778382" modified="2011-01-11" version="1">MITTASQLRERSLLGLKELSRNEIESILDRAHYWETQPQKLIPVLQSRFAANMFFENSTRTRFSFEMAEKRLGAQVLNFSAAASSVEKGESIYDTVRTLESMGIDAGVIRLKPAGVLQELAEKVSVPLVNAGDGNNEHPTQALLDLYTMRKTFGELKGLRVSIIGDILHSRVARSNLWALQKFGAKVSFCAPDNMQAPELATYAPYVPMQEALQADVVMMLRVQLERHAEGMLRSADEYREQYGLTEERAASLKSGTIIMHPAPVNRNVEIDSAVVESEQSRIFPQMANGVPIRMAVMERAMKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5C9</accession>
    <name>E3E5C9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA-binding protein S4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylmH</name>
        <name evidence="2" type="ORF">PPSC2_16535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372074.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03870"/>
    <dbReference type="EnsemblBacteria" id="ADO57489">
        <property type="protein sequence ID" value="ADO57489"/>
        <property type="gene ID" value="PPSC2_16535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3530"/>
    <dbReference type="eggNOG" id="COG2302">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075687_2_0_9"/>
    <dbReference type="OMA" id="MSRSKMV"/>
    <dbReference type="OrthoDB" id="1477108at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040591">
        <property type="entry name" value="YlmH_RBD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17774">
        <property type="entry name" value="YlmH_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="1">
        <location>
            <begin position="184"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="29410" checksum="4E07FF412EDF0ED1" modified="2011-01-11" version="1">MRTEIYEHFHPDERDYVDRASEWISHAGAYHEQKLTDFLDPRQQYILETLASKEDKVTIRVDGGYTASERKRALIAPDYSYLDDEEMGIQVLSISSDDHKINTLEHGDYLGAILGLGIKRGKIGDIHVLDDGCHVLVASEIGDFITMHLQQVHRVHVWTELLPVASLRTKEVALEAMDLTVASLRLDGIASDVYKLSRSKILTPIRAGRCRVNWKVEENPSTSLKVGDVISMQGFGRFKVLETDGMTKKGRFRVKIGKFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5J6</accession>
    <name>E3E5J6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17585</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57715.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324593.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3761"/>
    <dbReference type="EnsemblBacteria" id="ADO57715">
        <property type="protein sequence ID" value="ADO57715"/>
        <property type="gene ID" value="PPSC2_17585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3757"/>
    <dbReference type="eggNOG" id="ENOG5030RKM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1509180_0_0_9"/>
    <dbReference type="OrthoDB" id="1573156at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57715.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="23434" checksum="4A6876153C2BA09B" modified="2015-05-27" version="2">MNIRNIRRNMVVIQQVQGETMKISLNKVDENRLDVLPVDMEIDIRKEYKNITRHSGRMVHVIDWRIALYINGNKLDEDEVFVEEEFLKSLICPGKYPMFTCTCGIFGCGGYYVEVNHKDDRLFWLTEQSPFKEQFVKTSNKFAFSWNQIIDFLEELIHKFDELKSIMITHDLNFQYDVEIYRELIKEMKGRANYNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Q9</accession>
    <name>E3E5Q9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4190 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_18585</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372515.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05805"/>
    <dbReference type="EnsemblBacteria" id="ADO57936">
        <property type="protein sequence ID" value="ADO57936"/>
        <property type="gene ID" value="PPSC2_18585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3982"/>
    <dbReference type="eggNOG" id="ENOG50335BX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_159967_0_0_9"/>
    <dbReference type="OMA" id="CSIIGTL"/>
    <dbReference type="OrthoDB" id="2061154at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025241">
        <property type="entry name" value="DUF4190"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13828">
        <property type="entry name" value="DUF4190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="84"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4190" evidence="3">
        <location>
            <begin position="37"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="13084" checksum="8D8FA52614B77FB2" modified="2011-01-11" version="1">MSDLYKEPRSSDPFQEPNDYNAPFNQPPVVPPTNSKAVASMVLGILSVVIPYLGLIIGIVGIILSSLSLKEINRHGEQGRGMAIAGLVCSIIGTLIYALIIIFLVIVFVVAASSGDPDIFSDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5T5</accession>
    <name>E3E5T5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pocR3</name>
        <name evidence="3" type="ORF">PPSC2_18695</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372540.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05915"/>
    <dbReference type="EnsemblBacteria" id="ADO57962">
        <property type="protein sequence ID" value="ADO57962"/>
        <property type="gene ID" value="PPSC2_18695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4006"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4936">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036605_0_1_9"/>
    <dbReference type="OMA" id="YEGVTPF"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018771">
        <property type="entry name" value="PocR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10114">
        <property type="entry name" value="PocR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="242"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="39138" checksum="C51B04EDE69CE84C" modified="2011-01-11" version="1">MIREHLSIQKIFDLEKWEQLQDSLASVTKLAILTVDYRGNPVTSHSQCQSFCKKVRQDENLLPYCQKCDSRGGLEAVRSNKPYIYLCHYDIVDIAVPIIIDDKYIGAVMAGQVRLADPSSALQLEQILTSKNEKLYSSKWEELKGYYADLPTMTYQEIQMISNMLSLLCNYIVEEAMNKNLLAEMFEKASAIESTPQLSEILPGYSLKHIESLKKEMNNILADAYLNSSGDEDIPCGNPVLKPAFEYIYEHKGETFSLKAMADLCHISPSYFSRLFAKETGENFSSYLSRLKMKWAKQLLEATDIPVSQISSELGFNEPGYFIKIFKKYEGTTPAVYRKYYKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y0</accession>
    <name>E3E5Y0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58199.1"/>
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    </dbReference>
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    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO58199">
        <property type="protein sequence ID" value="ADO58199"/>
        <property type="gene ID" value="PPSC2_19875"/>
    </dbReference>
    <dbReference type="GeneID" id="66576088"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4236"/>
    <dbReference type="eggNOG" id="ENOG50305Q4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1650467_0_0_9"/>
    <dbReference type="OrthoDB" id="1247249at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="18971" checksum="3EC1E9013A00DA76" modified="2011-01-11" version="1">MYGHRQDDTLYIMTYTLNSGIKGTVPLSNQQIQEWLECYRIGKKFVTEIGKEYFGLHAELVADFKVHNQYSSYQEVIIPIQQPDTGLRELSQAYKSTETLIKVDCKCGTSYVTESPFKRTKWYCTKCREIVFLDNKKGMVDTSRGKAHYMTNKYFVERETTGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E638</accession>
    <name>E3E638_PAEPS</name>
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        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
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        <name evidence="6" type="ORF">PPSC2_12895</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO56723">
        <property type="protein sequence ID" value="ADO56723"/>
        <property type="gene ID" value="PPSC2_12895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2748"/>
    <dbReference type="eggNOG" id="COG1609">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_1_9"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56723.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="346" mass="38156" checksum="DD0CF2F2631F1E66" modified="2015-05-27" version="2">MVSRKEVAELAGVSEATVSRVLNATGPIKEDTRKRVLDVANQLGYVPSALARNFARSKSGHLGVVMPYVPKAHLFSAYFFSEMLSGIGNKARDSGLDLLLLFRKPGERMDYSSLFRQQKVDSCIILGARDEHDEVEALKRLQQEGRPFCVMNHHFEGQSFCEVDADHVEGSRAAVSHLIEQGCKRIAFLNGPDIYSNSTERLKGYLIALQEAGIEYDHELILEGNYSRRSGLEASATIADKLDDIDAVFAANDRMALGVMQGLRERGLAVERFPAFVGYDDSDAAEMAVPPLSSVRVPFYEMGELAASKLIPDSQDLTPALELTGCDLIRELLSTELIIRASSIRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6A0</accession>
    <name>E3E6A0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yfnA</name>
        <name evidence="6" type="ORF">PPSC2_13215</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371389.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00890"/>
    <dbReference type="EnsemblBacteria" id="ADO56785">
        <property type="protein sequence ID" value="ADO56785"/>
        <property type="gene ID" value="PPSC2_13215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2813"/>
    <dbReference type="eggNOG" id="COG0531">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007946_15_7_9"/>
    <dbReference type="OMA" id="VIAKYWG"/>
    <dbReference type="OrthoDB" id="527053at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002293">
        <property type="entry name" value="AA/rel_permease1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13520">
        <property type="entry name" value="AA_permease_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="31"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="93"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="128"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="155"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="216"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="256"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="300"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="352"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="377"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="408"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="434"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="463" mass="49565" checksum="6CF92F1C3E912196" modified="2011-01-11" version="1">MDLFRKKTGLLSHEESGSTGHLKRTMGPFDLTMLGVGCIIGTGIFVITGKAAAENAGPGLMLSFVIAGIACVLAALCYAELSSTVPAAGSAYAYSYIVFGEVLAWVLGWDLILEYGVAAASVSSGWSAYFQGLLAGFDIHLPLAITAAFDSTKGTIIDLPAVCIIMLITLLLSLGAKETVRFNFIMVCVKVGVVLLFIAIGIFYVKPANWTPFLPYGFSGVLSAAAIVFFAYLGFDAISTAAEEVRNPQRNMPIGIISSLAICTILYIAVSVVLTGMVPYTQLGVSDPVAFALRFIHQDFVAGLISVGAIAGMTTVLLVLLYGQTRLIFSMSRDGLLPVFLSKINTKTQTPIRSTWLVGSIIALASGLFPLHALTNLTSIGTLFAFAVVSVGVIVLRKTRPDLKRGFTVPWVPLLPLLSALVCIGLMLQLHISTWIGFIVWLLLGLLIYFFYGYHKSLLNHKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6S0</accession>
    <name>E3E6S0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">RNA polymerase sigma70</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">sigB</name>
        <name evidence="8" type="ORF">PPSC2_21215</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08445"/>
    <dbReference type="EnsemblBacteria" id="ADO58472">
        <property type="protein sequence ID" value="ADO58472"/>
        <property type="gene ID" value="PPSC2_21215"/>
    </dbReference>
    <dbReference type="GeneID" id="66575820"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4509"/>
    <dbReference type="eggNOG" id="COG1191">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014793_8_5_9"/>
    <dbReference type="OMA" id="FIRDKTW"/>
    <dbReference type="OrthoDB" id="1857862at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007624">
        <property type="entry name" value="RNA_pol_sigma70_r3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04539">
        <property type="entry name" value="Sigma70_r3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="6">
        <location>
            <begin position="33"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r3" evidence="5">
        <location>
            <begin position="115"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4" evidence="7">
        <location>
            <begin position="200"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="257" mass="29352" checksum="1E2D3913E9F2AA84" modified="2011-01-11" version="1">MNEKVTPPESMDEAVGLIWEYQQTKDNEIATVLIRKYEPMVKMAAGKISRNRPDLYEDLYQTGQMALIRLLQQYDISLGIPFEPYAMKSMLGHMKNYLRDKSWYIQVPRRIKEKGALVQHAIDELTVKLERSPNVNEIAEYLDLTVEETIEVLAGRECYHYVSLDSPLSQEESAATLGELISSDANDFDTVEKRMDLQQALSQLKEQEQKVLLLAFQDGQSQRAIAQTLGVSQMSVSRIQKRATEKLKQIMSNSSIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W5</accession>
    <name>E3E6W5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">LuxR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfiK</name>
        <name evidence="5" type="ORF">PPSC2_21420</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373085.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4568"/>
    <dbReference type="EnsemblBacteria" id="ADO58517">
        <property type="protein sequence ID" value="ADO58517"/>
        <property type="gene ID" value="PPSC2_21420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4554"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_191208_0_0_9"/>
    <dbReference type="OMA" id="GEIVCTI"/>
    <dbReference type="OrthoDB" id="1844937at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="4">
        <location>
            <begin position="4"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9185" checksum="485C52FF3F501964" modified="2011-01-11" version="1">MRENHNLSPKEQKVAICIAQGYKDSEISQNLSISMRRTAEIVASIKEKWNIKTRVEIGIFAYHYGLVFLTEGIEVHSSEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Y9</accession>
    <name>E3E6Y9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">30S ribosomal protein S11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">rpsK</name>
        <name evidence="9" type="ORF">PPSC2_22300</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the universal ribosomal protein uS11 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432559.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09765"/>
    <dbReference type="EnsemblBacteria" id="ADO58691">
        <property type="protein sequence ID" value="ADO58691"/>
        <property type="gene ID" value="PPSC2_22300"/>
    </dbReference>
    <dbReference type="GeneID" id="66575607"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4729"/>
    <dbReference type="eggNOG" id="COG0100">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072439_5_0_9"/>
    <dbReference type="OMA" id="KWGVAHI"/>
    <dbReference type="OrthoDB" id="1713391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01310">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001971">
        <property type="entry name" value="Ribosomal_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019981">
        <property type="entry name" value="Ribosomal_S11_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018102">
        <property type="entry name" value="Ribosomal_S11_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036967">
        <property type="entry name" value="Ribosomal_S11_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11759">
        <property type="entry name" value="PTHR11759"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00411">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002131">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03632">
        <property type="entry name" value="uS11_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00054">
        <property type="entry name" value="RIBOSOMAL_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="14084" checksum="A9BA780C21FAA657" modified="2011-01-11" version="1">MAKPKKVVRTKRRDRKNIESGVAHIRSTFNNTIVTITDPHGNAISWASSGGMGFRGSRKSTPFAAQMAAETAAKAAMEHGMKTVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPVPHNGCRPPKRRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E724</accession>
    <name>E3E724_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5 7">30S ribosomal protein S12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">rpsL</name>
        <name evidence="9" type="ORF">PPSC2_22460</name>
        <name evidence="10" type="ORF">PPSC2_28055</name>
    </gene>
    <organism evidence="9 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="10 11">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="9 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 11">SC2</strain>
            <plasmid evidence="10 11">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 7">Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="1 5 7">With S4 and S5 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 7">Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5 6">Belongs to the universal ribosomal protein uS12 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PPSC2_22460"/>
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        <property type="protein sequence ID" value="ADO59399"/>
        <property type="gene ID" value="PPSC2_28055"/>
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    <dbReference type="KEGG" id="ppm:PPSC2_22460"/>
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        <property type="component" value="Plasmid pSC2"/>
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        <property type="project" value="InterPro"/>
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        <property type="term" value="F:rRNA binding"/>
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    </dbReference>
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        <property type="term" value="F:structural constituent of ribosome"/>
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        <property type="project" value="InterPro"/>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="entry name" value="Ribosomal_S12"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="NA-bd_OB-fold"/>
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        <property type="entry name" value="Ribosomal_S12/S23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005679">
        <property type="entry name" value="Ribosomal_S12_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11652">
        <property type="entry name" value="PTHR11652"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00164">
        <property type="entry name" value="Ribosom_S12_S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002133">
        <property type="entry name" value="Ribosomal_S12/S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01034">
        <property type="entry name" value="RIBOSOMALS12"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00981">
        <property type="entry name" value="rpsL_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00055">
        <property type="entry name" value="RIBOSOMAL_S12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0614">Plasmid</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 6 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 5 7" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0820">tRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO59399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="15509" checksum="0DF5975091CDBD8F" modified="2011-01-11" version="1">MPTINQLVRKGRQAKIEKSKSPALQKGFNALKREATDISAPQKRGVCTRVGTMTPKKPNSALRKYARVRLTNRVEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVNNRMQARSKYGAKRPKAKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7B9</accession>
    <name>E3E7B9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sulfate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ST3</name>
        <name evidence="3" type="ORF">PPSC2_23620</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373510.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11125"/>
    <dbReference type="EnsemblBacteria" id="ADO58974">
        <property type="protein sequence ID" value="ADO58974"/>
        <property type="gene ID" value="PPSC2_23620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5000"/>
    <dbReference type="eggNOG" id="COG0659">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003182_7_0_9"/>
    <dbReference type="OMA" id="GCALVGQ"/>
    <dbReference type="OrthoDB" id="967266at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018045">
        <property type="entry name" value="S04_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01130">
        <property type="entry name" value="SLC26A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="140"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="217"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="292"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="317"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="347"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="2">
        <location>
            <begin position="384"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="482" mass="52027" checksum="C113ABFC782FF79B" modified="2011-01-11" version="1">MNLKQQWFGNIRADILAGMTVALALIPEAIAFSIIAGVNPMVGLYASISMAIVISFAGGRPAMISAATGAVAVLVVGLVKDYGVEYLFAATILAGIIQVLLGVLKIGRFISFISQPVMTGFVNALAILVFMAQLTHFHGANWIMYAMVAGTLLIVYILPRFVKSVPAPLTAIIIMTIITYVFELNVKTVGDIGTLTSSLPSFHLPQIEWSWHTLRILLPYSFTMALVGLLESLLTASILDEMTETKSNKNREARGQGIANFVNGFFGGMGGCAMIGQSVINVSSGGRGRLSTFTAGVFLAFLLLVLGGVVKEVPMGALVGVMFMVCIGTVDWKSLRNIAKVPKADTFIMVITVIIVMATHDLSKGVIVGVLLSALHFGWKMAKIRISTTEDHEAKVYHVRGPMFFASTTHFVDHFEPSDDPERVVVDFSHSHVWDHSAVTAIGKVLQKYRNSGKSIILQGLNEESRLIVEKLGGPVVTEPIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7D3</accession>
    <name>E3E7D3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Lactamase_B domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373678.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11895"/>
    <dbReference type="EnsemblBacteria" id="ADO59144">
        <property type="protein sequence ID" value="ADO59144"/>
        <property type="gene ID" value="PPSC2_24405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5168"/>
    <dbReference type="eggNOG" id="COG0491">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030571_2_4_9"/>
    <dbReference type="OMA" id="ATWSKEI"/>
    <dbReference type="OrthoDB" id="733552at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="20"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="236" mass="25655" checksum="DE851DEADCBDE35F" modified="2011-01-11" version="1">MRIVQVQHVYQLTFMPRLFPVNCYLVEEKEGLTLIDAGLPYSAQRIEQAAARIGQPIIRIVLTHAHGDHVGALDKLKAKYPEAQVFISRRDARLLKGDVSLEAGEPDTPIRGSVPKNILTQPDVLLEDGDNVGSLLAISAPGHTPGSMGFLDTRTHALIAGDAFQTRGGVAVAGRLKPLFPFPALATWNKEISLQSAKKLASYNPSLLAAGHGNMLKHPQSQLERAIMELEQQCSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7I5</accession>
    <name>E3E7I5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nagK</name>
        <name evidence="1" type="ORF">PPSC2_13240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371394.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00930"/>
    <dbReference type="EnsemblBacteria" id="ADO56790">
        <property type="protein sequence ID" value="ADO56790"/>
        <property type="gene ID" value="PPSC2_13240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2818"/>
    <dbReference type="eggNOG" id="COG1940">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036604_0_2_9"/>
    <dbReference type="OMA" id="WTFQAGE"/>
    <dbReference type="OrthoDB" id="1130699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="301" mass="32735" checksum="48AC7F9605BBE258" modified="2011-01-11" version="1">MKNKILVFDIGGSFIKFSLYSQGEFMTKGKVATPLDSLENLLIALKQIHSQFIDECEGIAVSMPGIVDSITGHMVHGGSLRYINDINMIEVFKKAFHLPVAIENDGKCAALGEVWRGSLQGIADGVVLVVGTGMGGGIISQGKLLKGHHLSAGEFSFIRTNNEHADNVDYLLGMQGSSSVLAKTVAKAKGLPADSITGEKVFKLIEEGDHTVQKIFREYCRNIATQIINLQAILDPEKFVIGGGISANPLLVVTIKEELEKLYLHSILNFVRADIEQSKLGNEANLIGAIYNYMQSHHLEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7J5</accession>
    <name>E3E7J5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Ferrichrome ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fhuB9</name>
        <name evidence="9" type="ORF">PPSC2_13275</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371403.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00965"/>
    <dbReference type="EnsemblBacteria" id="ADO56800">
        <property type="protein sequence ID" value="ADO56800"/>
        <property type="gene ID" value="PPSC2_13275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2828"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_0_9"/>
    <dbReference type="OMA" id="HIVWLIR"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="31"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="85"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="141"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="172"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="213"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="259"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="298"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="331"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="354" mass="37367" checksum="98B9DC5A8CA163E8" modified="2011-01-11" version="1">MKLSESSDSSAQSNRNQPPTQFHSRPWAASLILTAGLALLAFGIALSLSFGAASIKLEEVWNAVFHFNPELQNHQIIWEIRLPRILGGVLIGVCFAVAGAIMQGMTRNPLADSGLLGLNSGASLTMAICFALFPGTSFLQLMLYSFVGAALAVMLVYGTSAISKSGITPVRLVLAGAAVTALLSALGDTISLYFNVGQDLAFWYAGGLSGTKWVQLGIVVPWVVAAFIGALMLSRSITLLSLGDEIALSLGQRTGMVKVAGMILVLILAGVAVSLVGSIGFVGLIIPHITRKLVGVDYRWIIPCSAIMGALLIVFADLAARMINAPEETPVGVLIALIGVPFFLYLARKERRAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7L2</accession>
    <name>E3E7L2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Molybdopterin-guanine dinucleotide biosynthesis protein MobB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mobB3</name>
        <name evidence="2" type="ORF">PPSC2_13365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371420.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01055"/>
    <dbReference type="EnsemblBacteria" id="ADO56817">
        <property type="protein sequence ID" value="ADO56817"/>
        <property type="gene ID" value="PPSC2_13365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2847"/>
    <dbReference type="eggNOG" id="COG1763">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068199_1_1_9"/>
    <dbReference type="OMA" id="YKHRQAG"/>
    <dbReference type="OrthoDB" id="950545at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004435">
        <property type="entry name" value="MobB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03205">
        <property type="entry name" value="MobB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00176">
        <property type="entry name" value="mobB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobB" evidence="1">
        <location>
            <begin position="8"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="20832" checksum="1AD559FE9D2C1012" modified="2011-01-11" version="1">MKTKHPFVCQIVGFKNTGKTTFLGGLIRYVQQSGLRVAVIKHDGHEFEMDHEGTDTYKHRQAGAEGVAIVSAGRTAILEEHSRPVTGLIRHFQAYDCVLLEGFKQEKYPKLVMVREQSDARLVQELTNVQGVVVWECHMDWAQDYYSDEQTVQIYPADASDPAGRWLLEQIQRHRAGFQTEQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7N6</accession>
    <name>E3E7N6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_13485</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371444.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01170"/>
    <dbReference type="EnsemblBacteria" id="ADO56841">
        <property type="protein sequence ID" value="ADO56841"/>
        <property type="gene ID" value="PPSC2_13485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2871"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048406_1_0_9"/>
    <dbReference type="OMA" id="YETPDES"/>
    <dbReference type="OrthoDB" id="1326355at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028994">
        <property type="entry name" value="Integrin_alpha_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69318">
        <property type="entry name" value="SSF69318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168697" evidence="2">
        <location>
            <begin position="37"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="444" mass="49400" checksum="8F15B7EDF0CC23DD" modified="2011-01-11" version="1">MKGTAREVKKMLLKMVACCCSLLLLAGFLSGCNVISDPISLMQTPTMSDEKQQLNGAVNTQLGAVQPLRPNDPDDPTPIRTGDLNNDGIDEAVLFYETPDESVKIHGALFEDQGGTWVKKLTFDGEGTVLESFKLVDLTNDGTLDIVAGFSSGDSGENGEQKGLIVYSYTGGTLEKIYATGYTDFVVDDFNHKKMDLNGDNLNDLTIILLRRNEFFTVKTFQFSGGTFKEIGSLDLDSQALGVYNVVAGKVAQGRQGIIIDTKIAQTTTVSNVIVMDHGKLRKLNLMDVTFKDATIASGDVDGDGILEFGNLEKPKGWSNRPLDEVPYFVSFYQWDGAKGTIFKQQQYRDSNEQVYFRLPKELHGKVTIDPKVSRKDSYLRFILDDTDKTIAEIKFFSLSQWERNNEGYSQLWRTNAQVVGIKRSSELEPRKAIKNKLGERQVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y9</accession>
    <name>E3E7Y9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase</fullName>
            <shortName evidence="1">HK-MTPenyl-1-P phosphatase</shortName>
            <ecNumber evidence="1">3.1.3.87</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">mtnX</name>
        <name evidence="2" type="synonym">ykrX</name>
        <name evidence="2" type="ORF">PPSC2_14330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-hydroxy-5-methylsulfanyl-3-oxopent-1-enyl phosphate + H2O = 1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14481"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:49252"/>
            <dbReference type="ChEBI" id="CHEBI:59505"/>
            <dbReference type="EC" id="3.1.3.87"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 4/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the HAD-like hydrolase superfamily. MtnX family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.87" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371621.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01985"/>
    <dbReference type="EnsemblBacteria" id="ADO57022">
        <property type="protein sequence ID" value="ADO57022"/>
        <property type="gene ID" value="PPSC2_14330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3059"/>
    <dbReference type="eggNOG" id="COG4359">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058495_2_1_9"/>
    <dbReference type="OMA" id="VPFHEFD"/>
    <dbReference type="OrthoDB" id="1755462at2"/>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00877"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043716">
        <property type="term" value="F:2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019284">
        <property type="term" value="P:L-methionine salvage from S-adenosylmethionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01680">
        <property type="entry name" value="Salvage_MtnX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017718">
        <property type="entry name" value="HAD-SF_hydro_IB_MtnX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006384">
        <property type="entry name" value="HAD_hydro_PyrdxlP_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01489">
        <property type="entry name" value="DKMTPPase-SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="25398" checksum="E52485C86680F708" modified="2011-01-11" version="1">MSTAKKPVIFCDFDGTITNSDNIVAIMKHFKPAGYEPIMHQIVSGHMSIREGVDAMFALMSSELKEDIISYVLGQAGIREGFARFLDFVREQQIEFFVTSGGIDFFIDPLLEPFDIPQDHIFCNGADFSGAHIQITWPHPCNEPCKNDCGMCKTTVIRQYPPEQYERILIGDSLTDFEGAKIADLVYSRSHLTLKCQELGVPHVPFETFDDIIEDLKQKQEQGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E831</accession>
    <name>E3E831_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gluconolaconase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371737.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3185"/>
    <dbReference type="EnsemblBacteria" id="ADO57144">
        <property type="protein sequence ID" value="ADO57144"/>
        <property type="gene ID" value="PPSC2_14905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3180"/>
    <dbReference type="eggNOG" id="ENOG5030IUN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_493351_0_0_9"/>
    <dbReference type="OMA" id="CTEINYN"/>
    <dbReference type="OrthoDB" id="120906at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024535">
        <property type="entry name" value="Pectate_lyase_SF_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12708">
        <property type="entry name" value="Pectate_lyase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="SSF49842"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pectate_lyase_3" evidence="1">
        <location>
            <begin position="40"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="546" mass="61048" checksum="783E35770E79B356" modified="2011-01-11" version="1">MADFTDRLKLNLSGTGKELTPQQLNDNFKAIEKEFMERSVNVSWFGAAGDGIQDDTAALQELINKTPDYSILHIPSGRYKITSTLQIRKQGMRIFGIHKGRYRQGKGVTSIEYYGTGPCFQIGDESLPSFSGFQNVQFHDLSIRYEGIDRATLNNPFSQSVKRGYYGKGTLGIRDWRGGGVVLDNVLIEHFETAFWGYESDVNLFKCTEINYNKIGIHLQNRSSQFTSIALFTLGNDTALDLNSSNGARFMASQHIKDGSSSDIPILINDFMNAEFIGCWFEGLSREHKVTVPSFIQIGATKETKNVALRDSILAIADKYDDTQSVCNYFVDVVIGKKVLVDEVGGYPRNLKQLICFSGSSSTQQVTLRSHLDFSYSNHRYDENNGTGQALLLVEKYSNNGIEHLNETFVKAYLGSRQNIPAGSWQKVRFNQINHDELTEFDGSNSRWRAKRAGKYRIQVYVSTDPQVDGNRTRLALHLNDEQLAGSSAYAYLDDRVIGGLNYGALSGAMELRLEANSFIDIRVFSQNAVDILPGGGITYLTVSRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E835</accession>
    <name>E3E835_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371741.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02560"/>
    <dbReference type="EnsemblBacteria" id="ADO57148">
        <property type="protein sequence ID" value="ADO57148"/>
        <property type="gene ID" value="PPSC2_14925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3184"/>
    <dbReference type="eggNOG" id="ENOG5033FXD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_185001_1_0_9"/>
    <dbReference type="OMA" id="DHYRIPE"/>
    <dbReference type="OrthoDB" id="2059141at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025321">
        <property type="entry name" value="DUF4227"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14004">
        <property type="entry name" value="DUF4227"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9513" checksum="0B0DF5ADA827B60E" modified="2011-01-11" version="1">MVLSLRRGLQWLRLLILFGVLACMFFYSLRLFTDWITPVDHYRIPEGHAVKVFGGQTVNEGSEQRIGVLERLRFFYWYGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E873</accession>
    <name>E3E873_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zip2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">zip2</name>
        <name evidence="2" type="ORF">PPSC2_15480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371854.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3308"/>
    <dbReference type="EnsemblBacteria" id="ADO57265">
        <property type="protein sequence ID" value="ADO57265"/>
        <property type="gene ID" value="PPSC2_15480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3307"/>
    <dbReference type="eggNOG" id="ENOG503056C">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_820948_0_0_9"/>
    <dbReference type="OMA" id="TWIVEGE"/>
    <dbReference type="OrthoDB" id="1550516at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168251" evidence="1">
        <location>
            <begin position="25"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="341" mass="37943" checksum="33F2046397B39F06" modified="2011-01-11" version="1">MRKFRWVSAVAILILIATALPVQAATISAATETTDKQVGSLTPTVVSRLEKAVQELIGSKTAFQFDDVTDMGKTWIVEGELEDGTATLQTEYNKEKNRVDSTTIRYKISSLGKAMNAPLKTKVLNSAKVFDSKRPLQFEAFWRVKSPYQSNKPSNYWVFWGAGEKASSLYVDVDQGNAITVNADYALKQVDPVLLNRAMNTFKRVSGQRITVQHVSRYKDEKKGLSYWSFEDASETNEVKIGAVTGKVLAVSTSGMDWNDDADFKKSFASPKYTAAEALKLVKPKVQLLFNINVSGYKVKVQGNQYTFSKQQKGTDSIVAKVNKKGTFYEFSLHSSDGEMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G9</accession>
    <name>E3E8G9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppC7</name>
        <name evidence="7" type="ORF">PPSC2_16675</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57518.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04010"/>
    <dbReference type="EnsemblBacteria" id="ADO57518">
        <property type="protein sequence ID" value="ADO57518"/>
        <property type="gene ID" value="PPSC2_16675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3558"/>
    <dbReference type="eggNOG" id="COG1173">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028518_1_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="172"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="224"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="107"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57518.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="34390" checksum="15D72F303EBFC3F0" modified="2015-05-27" version="2">MNLDKLQVKPEDFQKIGVDEKQSEVIQRESLSAWRDAWERLRKNKVAMTSLIVLVLIVLFSLIGPILSPYNYYSNDLLSTNLPPSAEHWFGTDDLGRDMFVRTWMGARISLTIGLAAALIDLLIGVIYGGIMGYFGGRVDEIMNKFSEILYSIPYLLVTILLLVVLEPSITTIIIALCVTGWINMSWIVRGEMLQLKNREFVLASRSMGAGAGRLLFRHLLPNAVGPIIVTLTLSVPTAIFSEAFLSFLGLGVPNPEASLGSMIESALTGWMYYPWRMLFPAGLISLIMLAFNLFGDGLRDALDPKLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8I9</accession>
    <name>E3E8I9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YpuI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ypuI</name>
        <name evidence="1" type="ORF">PPSC2_16765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372122.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04100"/>
    <dbReference type="EnsemblBacteria" id="ADO57538">
        <property type="protein sequence ID" value="ADO57538"/>
        <property type="gene ID" value="PPSC2_16765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3578"/>
    <dbReference type="eggNOG" id="ENOG5030A29">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_121785_0_0_9"/>
    <dbReference type="OMA" id="QCIEEFF"/>
    <dbReference type="OrthoDB" id="1703849at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025013">
        <property type="entry name" value="DUF3907"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13047">
        <property type="entry name" value="DUF3907"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="19643" checksum="0D1414AB2B8407EC" modified="2011-01-11" version="1">MSAVNVQKLCESAQERLKTAVKRVETFLNEHALPQLAVDANEESVLFYKGFLSDLRHVLVFSEVSYEKLGVALRRANFDVDFAEKALYNVYHDCVNSFFYPKNETYAEDGRYAYTGQDAIRFRKTPVPAAREVIMDITKNFEELRDDLTYYESDYLTQRRMQTRRTHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Q2</accession>
    <name>E3E8Q2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05085"/>
    <dbReference type="EnsemblBacteria" id="ADO57761">
        <property type="protein sequence ID" value="ADO57761"/>
        <property type="gene ID" value="PPSC2_17800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3804"/>
    <dbReference type="eggNOG" id="COG3797">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106303_3_0_9"/>
    <dbReference type="OMA" id="NLIFMFP"/>
    <dbReference type="OrthoDB" id="1382593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012545">
        <property type="entry name" value="DUF1697"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36439">
        <property type="entry name" value="PTHR36439"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08002">
        <property type="entry name" value="DUF1697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF008502">
        <property type="entry name" value="UCP008502"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="21380" checksum="6DEA5EF203DC7615" modified="2011-01-11" version="1">MIYIALLRGINVGGNNKIEMKKLKQTFEHAGMGHVTTYINSGNIIFSSQERPNQELSLVLEQAILEDFSLPIRVIVRNMKEIQSIMGALPNEWANDTQMKSDVMFLWDEINSISVLDKLPLKPGIGHVMYTTGAILFSVSKEQVTKSGLTKLVGTKLYQQMTVRNVNTARQIYKLMQMAEQEELQDMDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Y9</accession>
    <name>E3E8Y9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Integron gene cassette protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373729.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12110"/>
    <dbReference type="EnsemblBacteria" id="ADO59196">
        <property type="protein sequence ID" value="ADO59196"/>
        <property type="gene ID" value="PPSC2_24635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5219"/>
    <dbReference type="eggNOG" id="ENOG5033C3P">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_171057_1_0_9"/>
    <dbReference type="OMA" id="FISEHGH"/>
    <dbReference type="OrthoDB" id="2009118at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="81" mass="9523" checksum="058018FA1E1A6C0B" modified="2011-01-11" version="1">MDNTPTIEQQIAQWMVAQIREVGTLKQEDAIAYVRSEYGEQYVFISEHGHVSLEKEIKKAFRKLHGGRIAWDRDAFLWAWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E925</accession>
    <name>E3E925_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pyrK</name>
        <name evidence="7" type="ORF">PPSC2_24790</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="5">Binds 1 [2Fe-2S] cluster per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="4">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the PyrK family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373765.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12285"/>
    <dbReference type="EnsemblBacteria" id="ADO59232">
        <property type="protein sequence ID" value="ADO59232"/>
        <property type="gene ID" value="PPSC2_24790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5254"/>
    <dbReference type="eggNOG" id="COG0543">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003827_1_2_9"/>
    <dbReference type="OMA" id="TERHMAC"/>
    <dbReference type="OrthoDB" id="1885467at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006221">
        <property type="term" value="P:pyrimidine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012165">
        <property type="entry name" value="Cyt_c3_hydrogenase_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037117">
        <property type="entry name" value="Dihydroorotate_DH_ele_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019480">
        <property type="entry name" value="Dihydroorotate_DH_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10418">
        <property type="entry name" value="DHODB_Fe-S_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006816">
        <property type="entry name" value="Cyc3_hyd_g"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="6">
        <location>
            <begin position="1"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="44"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="59"/>
            <end position="61"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="66"/>
            <end position="67"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR006816-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR006816-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="24920" checksum="D15DE2E580F02F3A" modified="2011-01-11" version="1">MANVISNVALVPGIYVMKIEGKFKGKMGQFYMLRSGNGYPLLPRPISIYDIGEESISFLYRVVGEGTHLFSQLQPGQEIQLEGPFGNGFPQVEGSLALIGGGMGTAPLLLAAKYYPHADVYLGFAQQAFGVEAFEAAAASVEVKVGGSIVEQVEPARYANMFSCGPTPMLQALALKTAGTASRLYISTERHMACGIGACLGCTMRTRGGNRRVCKEGPVFPVEEVEFDDLHGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9C8</accession>
    <name>E3E9C8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PPSC2_16120</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; Fe-Mo cofactor biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the radical SAM superfamily. NifB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371987.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57401">
        <property type="protein sequence ID" value="ADO57401"/>
        <property type="gene ID" value="PPSC2_16120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3443"/>
    <dbReference type="eggNOG" id="COG0641">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_3_1_9"/>
    <dbReference type="OMA" id="PTEACNF"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="UniPathway" id="UPA00782"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005980">
        <property type="entry name" value="Nase_CF_NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43787:SF3">
        <property type="entry name" value="PTHR43787:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="9">
        <location>
            <begin position="12"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="36887" checksum="465096C2EB75C532" modified="2011-01-11" version="1">MLDKSGILSYLVSNEIQELIILPTEQCNFRCTYCYEDFKMKRMSPETIQAIKKFLTRRVPQLKHLTISWFGGEPLLAKDILLNISEHAQKLSTKNNLTSYLISITTNGYLLSPSIFNELVNVGITKYQITLDGPKEIHNQTRKKVNTEGSFDTVWNNLLAIKESNLNVFVTIRVHLFHENLPYIPDFLELLKKHFYSDQRFKILLKPIAQFGGKNEEHPKIIEKSKHNKVIQPLEEIIHGKTAPRKNSNELEICYAARPNSLVIRSDGSLGKCTVALNDEKNNIGYITNDGTLKISQERLAPWLKGLLTLNKSDLGCPKHSII</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9E1</accession>
    <name>E3E9E1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372154.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04250"/>
    <dbReference type="EnsemblBacteria" id="ADO57572">
        <property type="protein sequence ID" value="ADO57572"/>
        <property type="gene ID" value="PPSC2_16915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3611"/>
    <dbReference type="eggNOG" id="ENOG5032S6I">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_155869_0_0_9"/>
    <dbReference type="OMA" id="YGRRRFN"/>
    <dbReference type="OrthoDB" id="1865429at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15578" checksum="11265A1C5DA5BFCD" modified="2011-01-11" version="1">MEKSMTTENVTASQQMDAKTLCQQHMHRYVCVWVKDGTMYDGIVEHVDDEKIYLAVPMGGEEMENVNLPYPPNNCGCGSRAYGGYASYPPYPPYPYPYPYPVPVPAYAYGFPYGRRRFNRLILPLAALTAISLLPYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9N9</accession>
    <name>E3E9N9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxyphosphonoenolpyruvate phosphonomutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_18120</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372409.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3876"/>
    <dbReference type="EnsemblBacteria" id="ADO57829">
        <property type="protein sequence ID" value="ADO57829"/>
        <property type="gene ID" value="PPSC2_18120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3871"/>
    <dbReference type="eggNOG" id="COG2513">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027389_2_3_9"/>
    <dbReference type="OMA" id="FPFTLCA"/>
    <dbReference type="OrthoDB" id="1485205at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00377">
        <property type="entry name" value="ICL_PEPM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039556">
        <property type="entry name" value="ICL/PEPM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="267" mass="29622" checksum="63466B06C506785B" modified="2011-01-11" version="1">MNKIQEFNDLHTSEEILFLGNAWDLLSALALEKAGFKAIGTTSWGIANTLGFSDGELIDFEQHVSIIRTIAEHVQIPVSADIEAGYGKDVATIVEHVLRTADVGVAGINIEDSLKQQKGLREVRAHSNLLSKIRAALDVHGFKDFFINARTDTFLQIEAPLSETIERAKAYVESGANGIFVPGLKNDEEIRKVVYHIHAPLNVLSLPGLTNVRQLQQLGVKRFSFGNAFSDKIIVALQKNAEQLINLRDTSHLYDDFANPELDEYEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9U0</accession>
    <name>E3E9U0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutamine amidotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yoaZ</name>
        <name evidence="2" type="ORF">PPSC2_18345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372459.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05645"/>
    <dbReference type="EnsemblBacteria" id="ADO57880">
        <property type="protein sequence ID" value="ADO57880"/>
        <property type="gene ID" value="PPSC2_18345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3925"/>
    <dbReference type="eggNOG" id="COG0693">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_44_5_9"/>
    <dbReference type="OMA" id="DAWYRLF"/>
    <dbReference type="OrthoDB" id="1421548at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="1">
        <location>
            <begin position="5"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="23117" checksum="B6B4BC71258F3137" modified="2011-01-11" version="1">MNSTAYLYVFDTMADWEIGYLTAELNSGRYYKKGLFPSKIVTVGMEKTPVTTMGGLKILPDIKLDECSIKSTDLLILPGGNTWTETIHQPILKIVERCLEEGIWVAAICGATMGLAQAGLLNSRSHTSNDLEYLKMICPTYTGEKYYKMESAVTDGKLITASGMAPLEFSVHVLKALGVFSSKTLEAWYSLNKTRASKHYYELMNSIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9V7</accession>
    <name>E3E9V7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Ribonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cafA</name>
        <name evidence="8" type="ORF">PPSC2_19365</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58090.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324654.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06565"/>
    <dbReference type="EnsemblBacteria" id="ADO58090">
        <property type="protein sequence ID" value="ADO58090"/>
        <property type="gene ID" value="PPSC2_19365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4132"/>
    <dbReference type="eggNOG" id="COG1530">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003468_5_3_9"/>
    <dbReference type="OrthoDB" id="1209444at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019307">
        <property type="entry name" value="RNA-bd_AU-1/RNase_E/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004659">
        <property type="entry name" value="RNase_E/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30001">
        <property type="entry name" value="PTHR30001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10150">
        <property type="entry name" value="RNase_E_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00757">
        <property type="entry name" value="RNaseEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="S1 motif" evidence="7">
        <location>
            <begin position="38"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="166"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58090.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="44661" checksum="FF8343E3A872C8A9" modified="2015-05-27" version="2">MKQMIVQCQQQMTQMALLEEGRLVEYAAELPRKRGILGSFFKARVVNVLPGMQAAFVDIGQRKNAFLYVDDVLHAHLDKQPEVKPSISELLKVGQEIVVQVLKEAVGSKGARVTTHFSLPGRWIVYMPRADYVAVSKKIEREGERARLKAMGEQLRTGEEGVIIRTVSEEMSIEAIENDLNQLRKQWAAIQRKAGEHSAPCELHRDLSIVQRLIRDVFTPEQDELVIDSEEQAKDAEVMLQQIGSAKAHVSIFRSAEETIFKAYGIHEQLERDFARKVWLQGGGYIVIDHTEALTVVDVNTGKFTGGSNLEETVTQTNIEAAEEIARLVRVRDIGGIIIIDFIDMEQEENRREVSSVLEARLKKDRTKSYVVGWTRLGLLEMTRKKVREEKTLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA59</accession>
    <name>E3EA59_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YcsE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ycsE</name>
        <name evidence="1" type="ORF">PPSC2_20555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372921.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07810"/>
    <dbReference type="EnsemblBacteria" id="ADO58351">
        <property type="protein sequence ID" value="ADO58351"/>
        <property type="gene ID" value="PPSC2_20555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4384"/>
    <dbReference type="eggNOG" id="COG0561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044146_0_1_9"/>
    <dbReference type="OMA" id="WFWAYST"/>
    <dbReference type="OrthoDB" id="1374424at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27789" checksum="AF21BC58519F98E2" modified="2011-01-11" version="1">MGENQYKYKLLALDMDGTLLNDNHEISLETINWINKAIQEGIHVCLSTGRAAMHALPYGQQLGLETPMVTVNGSEVWKSPHELWRRYLLDKELIRKMHQIAVETGSWFWAYSTEELYNRDRWPDTLDTQEWLKFGFNTENDEIRHQILLKLQEMGGLEISNSSMTNLEINPAGISKASGIAEVCDLLGITMEQVVAVGDSLNDLAVIQAAGLGVAMGNAQDTVKEAANVVVASNNEDGIVEVIRDYVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAD8</accession>
    <name>E3EAD8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_21605</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373123.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08800"/>
    <dbReference type="EnsemblBacteria" id="ADO58556">
        <property type="protein sequence ID" value="ADO58556"/>
        <property type="gene ID" value="PPSC2_21605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4593"/>
    <dbReference type="eggNOG" id="COG2244">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050201_0_0_9"/>
    <dbReference type="OMA" id="RAFRISM"/>
    <dbReference type="OrthoDB" id="564091at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002797">
        <property type="entry name" value="Polysacc_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01943">
        <property type="entry name" value="Polysacc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="303"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="341"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="375"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="399"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="459" mass="50393" checksum="C6454E9A46528101" modified="2011-01-11" version="1">MSTWTAARKVFTGDSLAKTIMRTSFNNFFVLIVTTLTSILTARMLGVEGKGELAAVLFWPTLIGSVLSFGLPTSLIYNLKKKTGTTEELLALSLWIQLPASLLAGAVAWICMPLWLNGYGADIIQLSQIYCAAAVPLAVLTALTTALSQGLDRFSVYNGLLFYYPLLNFIGLVTLWLMGLLNVQLAGAVNFAASFLALMWAFLRLRKHMNLRAFRPLTSRQVLRPYYSYGARVYGMELMGTLSTQTDKIVIVALLSPKAFGLYSVVYALSRVFNVVQNAVTNVTFPKVTGMEHSKIVETVGRAFRISMAAMLIVIVPALFIGRYMLGLLYGPAFLEASLTFYLLSLECIIGGGSWILASAFNALGRPGLVLFRQIVAYAITVGLFFICTPIFGLDGIAIALLVGACVRLAFSLFSFPMFFNVPLSRIIFDKSDITFVLQTIQKKRRKGELKDAEFASHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAE0</accession>
    <name>E3EAE0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_21615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373125.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08810"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58558">
        <property type="protein sequence ID" value="ADO58558"/>
        <property type="gene ID" value="PPSC2_21615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4595"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_896716_0_0_9"/>
    <dbReference type="OMA" id="TRCIQSI"/>
    <dbReference type="OrthoDB" id="1445278at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="5"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="35666" checksum="D1F753963040AD39" modified="2011-01-11" version="1">MSDVSIIICTRNRIEDLTRCIQSIAAQQQLEHTAVELLIVDDGDISDQQIEQYRHMVSGLPQGVLRYYKKSRPGVWLSRYEALSLVRYDIVLYFDDDAELDDKLYIRRLLDTYEQDETIVGVGGIAKGLHSSRAGKLLGVLTFQMSSSLGKLSPSSLAGSLLRWSEATETFNTEFFHGCNMSFRRDALRDMKPYPWMTSYAVADDLYMCQLASRYGKLVINPDLKIIHHESPSSRDKAGKVAKATAINHYYFLALKKAGFIQYGALLWTLTYLMLKETLRRNFNAADGYKQGVLFILNPRKQKYNEYLGPAVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAH3</accession>
    <name>E3EAH3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pyridoxal kinase</fullName>
            <ecNumber evidence="3">2.7.4.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">thiD3</name>
        <name evidence="3" type="ORF">PPSC2_21765</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ThiD family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.7" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373158.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08900"/>
    <dbReference type="EnsemblBacteria" id="ADO58591">
        <property type="protein sequence ID" value="ADO58591"/>
        <property type="gene ID" value="PPSC2_21765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4631"/>
    <dbReference type="eggNOG" id="COG0351">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020520_0_0_9"/>
    <dbReference type="OMA" id="KDEVGYA"/>
    <dbReference type="OrthoDB" id="461201at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008972">
        <property type="term" value="F:phosphomethylpyrimidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01169">
        <property type="entry name" value="HMPP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045029">
        <property type="entry name" value="HMP/HMP-P_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004399">
        <property type="entry name" value="HMP/HMP-P_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013749">
        <property type="entry name" value="PM/HMP-P_kinase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20858">
        <property type="entry name" value="PTHR20858"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08543">
        <property type="entry name" value="Phos_pyr_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00097">
        <property type="entry name" value="HMP-P_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phos_pyr_kin" evidence="2">
        <location>
            <begin position="13"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="269" mass="29016" checksum="DF7D7EC7101B84CE" modified="2011-01-11" version="1">MTIPKTLTIAGSDTSGGAGIQADLKTFQELGVYGMTVLTTVVAMEPRTWNHLVYPVALDVVEAQLRTVLEGIGFDAMKTGMLGSVDIIELVASHLKKHDLKRIVIDPVMVCKGTDEVLQPENTEAMLELLIPGADLVTPNLFEASQLAKKGPITTLEQMQEAAAIIHERGAKHVLIKDRGKIRAGKAMDLLYDGITFDWFEADVVQTNFTHGAGCTTSAAVTAGLAQGLTVREAVDQAKKFITQAIEGGFKLNEFVGPTLHVAHRLQNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAI1</accession>
    <name>E3EAI1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Sulfate/thiosulfate transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">cysW</name>
        <name evidence="12" type="ORF">PPSC2_21805</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373166.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08940"/>
    <dbReference type="EnsemblBacteria" id="ADO58599">
        <property type="protein sequence ID" value="ADO58599"/>
        <property type="gene ID" value="PPSC2_21805"/>
    </dbReference>
    <dbReference type="GeneID" id="66575708"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4639"/>
    <dbReference type="eggNOG" id="COG4208">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_14_0_9"/>
    <dbReference type="OMA" id="NEYNFVA"/>
    <dbReference type="OrthoDB" id="1110665at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015419">
        <property type="term" value="F:ABC-type sulfate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011866">
        <property type="entry name" value="CysW_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005667">
        <property type="entry name" value="Sulph_transpt2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406">
        <property type="entry name" value="PTHR30406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406:SF1">
        <property type="entry name" value="PTHR30406:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00969">
        <property type="entry name" value="3a0106s02"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02140">
        <property type="entry name" value="permease_CysW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0764">Sulfate transport</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="30"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="81"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="124"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="156"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="259"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="79"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="31850" checksum="47F76831E353F78D" modified="2011-01-11" version="1">MSQAITGQELASAPVPSSAPPNRVTTEAPWVKWTLIGAAFLALLWVLVLPLIVVLTEALKQGWSVYVEALRDPDAMSALRLTLLVAAITVPLNTVFGVAAAWLITKFHFRGKGVLVTLIDLPFAISPVVGGLMYVLVFGAQGWLGPWLDEHDIKIIFALPGIILATLFITFPFVARELIPLMEDQGQQEEEAAVTLGARGWRIFWKVTLPNIKWGLLYGIILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQFSASFAVASLLLLLALATLVLKSWFGRKRVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAJ4</accession>
    <name>E3EAJ4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">DNA repair protein RadA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">radA</name>
        <name evidence="8" type="ORF">PPSC2_22575</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.</text>
    </comment>
    <comment type="function">
        <text evidence="5">Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.</text>
    </comment>
    <comment type="domain">
        <text evidence="5">The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the RecA family. RadA subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373291.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10040"/>
    <dbReference type="MEROPS" id="S16.A04"/>
    <dbReference type="EnsemblBacteria" id="ADO58752">
        <property type="protein sequence ID" value="ADO58752"/>
        <property type="gene ID" value="PPSC2_22575"/>
    </dbReference>
    <dbReference type="GeneID" id="66575551"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4786"/>
    <dbReference type="eggNOG" id="COG1066">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018264_0_1_9"/>
    <dbReference type="OMA" id="FELMRLA"/>
    <dbReference type="OrthoDB" id="505485at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000725">
        <property type="term" value="P:recombinational repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01121">
        <property type="entry name" value="Sms"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01498">
        <property type="entry name" value="RadA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004504">
        <property type="entry name" value="DNA_repair_RadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041166">
        <property type="entry name" value="Rubredoxin_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18073">
        <property type="entry name" value="Rubredoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00416">
        <property type="entry name" value="sms"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5 6" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0346">Stress response</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RECA_2" evidence="7">
        <location>
            <begin position="69"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Lon-protease-like" evidence="5">
        <location>
            <begin position="354"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="RadA KNRFG motif" evidence="5">
        <location>
            <begin position="255"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="98"/>
            <end position="105"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="457" mass="49243" checksum="9CF9E1FD1A8ADACB" modified="2011-01-11" version="1">MAKVKTKFSCTECGYESPKWYGKCPGCQAWNSMVEETESVVKTQGMGSSLLTHSTKDKPLPIIEVESGKETRILTGIGELNRVLGGGVVPGSLVLVGGDPGIGKSTLMLQTSNELALTGLKVLYVSGEESVRQTKLRADRLGALSPSLYVLCETNLETIEEAVDSLKPEFLVIDSIQTVYLPEVTSAPGSVAQVRECTSRFMRIAKGLGIATVLVGHVTKEGAIAGPRLLEHMVDCVLYFEGERHHTYRLLRAVKNRFGSTNEIGIFEMAESGLREVANPSELFLSERPLGVAGSTVVASMEGTRPVLVELQALIAATHFPSPRRMGTGIDHHRMGLIIAVLEKRMGMFLQNQDAYLNVAGGVKLDEPAVDLAIAVSIASSFRDAPTKPYDVIFGEVGLTGEVRAVSRAEQRVREAEKLGFKRVIMPEKSLKGWTHPKGIQIIGVGTVADALAAALD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAK6</accession>
    <name>E3EAK6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_22655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58764.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886146.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4822"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58764">
        <property type="protein sequence ID" value="ADO58764"/>
        <property type="gene ID" value="PPSC2_22655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4798"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025996_2_1_9"/>
    <dbReference type="OrthoDB" id="865276at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58764.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="35785" checksum="3042FF03877AF758" modified="2015-05-27" version="2">MSTYNGAAYLDEQIESLINQKDVEVQILIRDDGSTDDTVDKLSILEQRYPRHIRLCRESNVGVIASFFDLIERSSEAFDYYAFCDQDDVWMPSKLARAVARLREKDGSRPLMYCSATQMVSQNLEPLKVWPADIPRSLSFYNALIENVCVGCTMVINKETLQLVKTRMPDTLDNIIMHDWWIYLCTSSFGEVIFDHEPYIWYRQHQNNVLGGSTDGWLGKWRKRLSRFVKGKNRYILSKQARQFVQLYGQDMPSQMYRDVERFLHSYHKGVLSRIKYIWQSPFYRQSRLDNWIYKFVFILGKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAW9</accession>
    <name>E3EAW9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/putrescine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cysT7</name>
        <name evidence="7" type="ORF">PPSC2_23900</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373568.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11405"/>
    <dbReference type="EnsemblBacteria" id="ADO59033">
        <property type="protein sequence ID" value="ADO59033"/>
        <property type="gene ID" value="PPSC2_23900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5057"/>
    <dbReference type="eggNOG" id="COG1176">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_18_2_9"/>
    <dbReference type="OMA" id="YYMARYT"/>
    <dbReference type="OrthoDB" id="1488093at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="53"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="92"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="138"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="190"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="241"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="57"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="29917" checksum="98248D278D5B7EAF" modified="2011-01-11" version="1">MKKTYLYWLLLPGLLFLAVFMVIPIVLTIGSTFVQNSSFTLEGYLHFFKDPYFLKILLTTLEVSVVTTLVCVLLGFPTAYYISQKAPRRKGILLALAIFPLLTSPVVRSFSWMVILGRKGLLNNVLMSLGLVDEPLNILYTPAAMIIGLVHLFLPLMIISLIGVLENIDGDLVHAAQSLGASRFSAFRKIVFPLSVPGLIIGSILVFVGSLTAYTTPALLGGKQRVIATFLYQNAMTLNDWFLASVIATIMIAITFIVVGLLNKAAHKLNPKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAY3</accession>
    <name>E3EAY3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">von Willebrand factor A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373582.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5109"/>
    <dbReference type="EnsemblBacteria" id="ADO59047">
        <property type="protein sequence ID" value="ADO59047"/>
        <property type="gene ID" value="PPSC2_23960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5070"/>
    <dbReference type="eggNOG" id="ENOG5033X66">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_697992_0_0_9"/>
    <dbReference type="OMA" id="WYIAQAN"/>
    <dbReference type="OrthoDB" id="651846at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="371"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="395" mass="45127" checksum="C4BFB79E2C21BBF7" modified="2011-01-11" version="1">MKWKEPTFGATPMLRALTTANAHRKAKAFDLAAEQKKQKLNYPDWAQTWLRKYKEDWYIAQANGDEVGMRKAQKLAEGLRSKLHEMATFPKWAQEEMKKETVRWMTAEASGDIRGKLAAEKAGRAIREKLGLIDTTENTSSEVSVTNESKETAKPNVKTPAGKWIPAEFQYNGSSEAEKTFKRRSLNFTKMKWNQEKLHGLWEATKKIQETYDIQIDPRFLLAIIIQEGTGSFNTSSTNRAADGEHGAETNYARDLMKANSLVFGKILGYIYYGQEFRQAVVKNNKLRGITGKGDVFQYCNWFTPILRMKSKRVECGIYASDNRWGENVRKIYNTFSGNEASNYEQYLLSLDKSVTQKIAASEGIKLPDFKFKPTQNGNDSRKNDTNEWSIVGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBG5</accession>
    <name>E3EBG5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yerP1</name>
        <name evidence="2" type="ORF">PPSC2_22000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373205.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09150"/>
    <dbReference type="EnsemblBacteria" id="ADO58639">
        <property type="protein sequence ID" value="ADO58639"/>
        <property type="gene ID" value="PPSC2_22000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4679"/>
    <dbReference type="eggNOG" id="COG0841">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002755_1_2_9"/>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="334"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
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            <begin position="357"/>
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        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
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            <begin position="382"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="427"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="459"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="528"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="861"/>
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    </feature>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="912"/>
            <end position="934"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="962"/>
            <end position="984"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="990"/>
            <end position="1013"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1036" mass="112799" checksum="8895E5E9F2C2F405" modified="2011-01-11" version="1">MIKYIVKKQKITLIFFGMCILLGLFNFTSLPKQEQPDVIPMSASVTTIYPGASPERIEQTITKVMEQKIKAVQGVKTISSTSSKGQSSIIIEALNDADPTKVWADLRTKVQDAQSELPDDAMQPIINDSMTSSFIGSYAITSDKVEDLYSLNELMNKWKDQLKTVHGISQVNIQGIPEQEVRVSLDTQKMQQYNISWEQVVQAIKDENDRVPTGSMDFNERTYQLTVNASTDPSILNNVQISSNDDGFPISLKDIGTASLVFKKAASYTYVNTKPAISISVSGDIGTDVPTVSKATTAKINQLASSLPKNVHFELLFAQNDRVSEIFGNLTKEMIIAILSVIVICTLGLNLLTSAFVALAIPVSIAIGFIFLPMTGTTLNQISVIGLIIVLGILVDDAVVVNDNIERRRSEFGENATEAAIKGTKEVSLSIITATLATVAAFAPLLFLPGNIGDFIKPIPTVISLTMLASMIMSLTIIPIFRQWYDQRRKGKQSNQAVKPPGLLGHQIQSLSNVYSKNWMPRILQRPLLTALIGLMIGTAAYGLLAVVPIQLFPESDQADATISVTMPEGTSLQATNRVINEIGLWVKKQPETERLSATAGGGAPQMYSDVAGGHGSGGAVNGQLAVVGNEGLFDLQKTVDSWTHTLQAKYPSALISIRVPQLGIPVGSAVSIRMKGEDIDKLQNMTAKVKEMVAGTPGAVDVTDNMGMQSYNLNFQVNPQALDKYRVSYSNLTRTLLLMGDGVNVTDFDTGKELLDINIYMNKPNDDPEVLFQQLSVTNAAKEQIPLSQLVTMKPDFSIQQIHRYDLERTVTISANANGRTATELTNDIRSKLTHTQFEPGYTWEMGGETSAQSDIFTDLGKLAIIVVFLILLLITMQFYSVSTPLIIMTTVYLAAAGGILGSFISGMPIGFMSIMGIISLAGIVVRNGIVLIEFIEDARREGAELTDAILMACSARFRPILLTSLTAIVGMIPIATIGEILFKPLATTIIFGLIFSTILTLFVVPTLYMVVAHLKLKRKQKQEKTINTDSSLTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBH4</accession>
    <name>E3EBH4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Sucrose-6-phosphate hydrolase</fullName>
            <ecNumber evidence="3 8">3.2.1.26</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7 9">Invertase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">scrB5</name>
        <name evidence="12" type="ORF">PPSC2_22030</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Enables the bacterium to metabolize sucrose as a sole carbon source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.</text>
            <dbReference type="EC" id="3.2.1.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Glycan biosynthesis; sucrose metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.26" evidence="3 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58648.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09180"/>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58648">
        <property type="protein sequence ID" value="ADO58648"/>
        <property type="gene ID" value="PPSC2_22030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4688"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001528_7_0_9"/>
    <dbReference type="UniPathway" id="UPA00238"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004564">
        <property type="term" value="F:beta-fructofuranosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005985">
        <property type="term" value="P:sucrose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006232">
        <property type="entry name" value="Suc6P_hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01322">
        <property type="entry name" value="scrB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="10">
        <location>
            <begin position="3"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="11">
        <location>
            <begin position="310"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00033367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58648.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="459" mass="52340" checksum="D1025404E5678329" modified="2015-05-27" version="2">MAEFGWMNDPNGFIQYNGQYHLFYQHYPYKSVWGPMHWGHAVSRDLMKWDYLPVALAPDSEFDRDGCFSGSAVEQDGKLVLMYTGHVVTGPDKDQDYKQSQGIAVSEDGVTFEKWEGNPVIGYDAIPDRVSRKDFRDPKVFRHEDQYYVVLGSNDAQGNGLVLLYRSEDLRNWTYVNVLAVSDGRYGDNWECPDLFPLGGRHVFMLSPQRMPAQGEAYRNLHSTMYGIGDFNAEAGTFTAEQYAQVDHGFDFYAPQSTLDDKGRRIIIGWMDMWESEMPTQQGHHWAGAMSLPREAVIDHDRLLFRPLEEVENYRSNLFEQRDILLTGEQIMETFGDSYELKAVFEFEAGNTDEFGLKLRVGGEEETVLSYRPDDGLFRFNRERAGIGPGGERRVPLGLQEGRLELRIFVDKSSVEIFIGDGEYVLTGRVYPGMESTGIHAFASGKCTIVSFQKWDILA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBL5</accession>
    <name>E3EBL5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Autotransporter adhesin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_22960</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373371.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10435"/>
    <dbReference type="EnsemblBacteria" id="ADO58833">
        <property type="protein sequence ID" value="ADO58833"/>
        <property type="gene ID" value="PPSC2_22960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4862"/>
    <dbReference type="eggNOG" id="COG1361">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_224472_0_0_9"/>
    <dbReference type="OMA" id="NRGRFNV"/>
    <dbReference type="OrthoDB" id="480421at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008966">
        <property type="entry name" value="Adhesion_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001434">
        <property type="entry name" value="DUF11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01345">
        <property type="entry name" value="DUF11"/>
        <property type="match status" value="22"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49401">
        <property type="entry name" value="SSF49401"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01451">
        <property type="entry name" value="B_ant_repeat"/>
        <property type="match status" value="25"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0572">Peptidoglycan-anchor</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="346"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="477"/>
            <end position="580"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="607"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="863"/>
            <end position="970"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="989"/>
            <end position="1090"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="1119"/>
            <end position="1223"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="1246"/>
            <end position="1347"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="1376"/>
            <end position="1478"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="1503"/>
            <end position="1592"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="1631"/>
            <end position="1734"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="1758"/>
            <end position="1860"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="1888"/>
            <end position="1990"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="2015"/>
            <end position="2114"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="2143"/>
            <end position="2248"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="2400"/>
            <end position="2502"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="2527"/>
            <end position="2615"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="2655"/>
            <end position="2760"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="2785"/>
            <end position="2871"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="2911"/>
            <end position="3013"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="3178"/>
            <end position="3276"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="3300"/>
            <end position="3398"/>
        </location>
    </feature>
    <feature type="domain" description="DUF11" evidence="2">
        <location>
            <begin position="3427"/>
            <end position="3536"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="3691" mass="371473" checksum="D568D859B829AD7D" modified="2011-01-11" version="1">MAFIQRYATNQTGAITFIGNTLGLARSASAGVPGTVTSIGAFITTNTASRFGTYPFGTTSAFASNSSTAFLVLPTGSTVLYAELIWGGSYANGNTNVLSSASNPITFQTPALSTTVSPESATSINVTSLSTYVRTANVTNLVIQGGAGAYTVGNVTGTITVPDSTNTNHAGWTLAVVYNNPSLPFRNLSLRVGGEGVSSATGSVNVVISGFATPVQGTLRGRALISAQEGDVDITGDRALFGPTTSNLTALSGPNNFSTNFFASQINGDDGTLVTTGTFGTTNAVNGTPGTQVTGGRQGWDITNVDISSTLLNSQTSGVLQLTTNGDIYTVNANAIQIDINAPLVTLTKTASSTGLVIGDTVTYTVNISNTGLVSASNTVLTDTIPVGATFVPGSVIVAGIAQPTANPATGITVGSVAPSSTVTITFRATVTSLPANTQLGNQASAAFSFQTVPGGPVISGSVPSNTASTPIYQPVIGIVKSANTSAATVGDTITYTFQISNTGSIAANLNFIESIPAGSSFVPGSVTIGGSSVPAANPATGFSVGTINTGTTIPVTFQTLVNAVPASGNLTDQATYTYTFTPPDGRVLNGNGTSNTLTIPVSSPNVSVTKASSLAAAAVGEAVQFTITATNNGIANVTNVVVTDPLPSGVAFVPGSVTVNGTPATTASPVNGIPIGTLAPGASVTVVFRAAINSLPSPAQINNRATVSFTSGAFTGSSLSNLVAIPVVIAVSTITKSASSNRASVGGTITYSFLIANTGTAVLNMTLTETVPTGSTFIPGSVIVGGSSVPGANPNTGIPVGTVNPGAQITVSFRTTVDSLPSGGGLNDQGLLQYTYQLQDGRVLSGSLLSNIVSVSISLPNVAVTKSAGFTSVSVGETLTYSVSAVNNGIDPITNAVITDPLPGSVSFVPGSVTVGGSPVSTADPRSGIPVGSIGAGASVLVSYAVLVNAVPSVQPLQNTASVSFTSGTFTGTSQTNTVAVPVYQPRISVAKSANTTAATIGDTILYTLSVTNSGNYNASVTLTDAIPSGSSFIENSVVINGVSQPGASPAAGIFIGTVSPQSPITLTFQTVVTSLPTPSVLTDQANATISFTLPDGRVRTDSTSSIVVSIPVSAPNVSISKTADRSTAIPGDSVLYTLTVLNNGIQAVNNVVVSDPIPAGSQFTAGSVTLNGIAVAGGDPRLGIPVGSIASGGGATITFRVTVSSPLPSPPQLTNQARVSYTSGAFSGVSVSNPVTIAVNAPVLTVSKTANPIRATVGDIVTYSVAVTNNGNIAAAATLTDNIPAGSALVPNSVVVNGAPAPGASPATGLSIGSIAPGATTQTTFQVVITSVPLPPQLTDQANISFSFQPPDGRIVNGNVSSNIVTIPVSSPNVQVSKSTSATDAVPGDTITYTITATNSGIEIVTDVRVTDTIPTGSSFVPGSVIVNGTTLSSASPVTGIPVGSIAAGASATVTFSVSVNSLPDPPQLSDQATVSFTSGTLNFTSLSNTVVVPVYQPIINLVKTANTSQATVGDTVVYTLTAQNTGNLAATATFTDSIPSGSSFIPNSVTVNGLPVAGANPQTGVVVGNIAAGASVALTFQVVINAVPTGLGLLNQGSATFTFQPPDGRTLNGSVQSNPVFIPVSNPDVTVTKTVNQTSVAFGDTITYTITAANNGITPVTGTVFIDPIADGTTFVSNSVQVNGVTIPGANIATGVSVGTIPSASSATVTFQATVTSLPASGLSTDQATVSFNSGAFAGQSVSNQVSLPVFQPILNVTNTLSADRATVGSTLGFVITVTNTGNAPAETVVLDLLSSSLSLNQNSVLVNGAPIPGADPITGINIGSVAPGATVTVSFSAVVISIPPGSILTNQATVNYTFQLPDGRTLTGSGAALPVSIPISSPNVTVTKAADVAVAVVGDSVPYVITAFNNGLDPVTGVIVTDTIPFGTAFVPGSVTINGTPVVTANPQSGIPVGTLGAGGGATIRFLLNVQSLPSPASITNEATVSFTSGAFNGFSVSNPVTIPVYQPIVTVSKSAGTGRATVGDTITYTISITNSGNIGVDTILTDPIPAGAAFIPNSVVINGTAAPGSDPTVGIPLGIIGAATTVALTFQAVITSLPASGTLVNQATAAFSYQPPDGRVLTGSAVSPAVTVSVSSPDVDVIKTASATDAVVGDTITYTVIATNNGISPVVNAVVSDPLPPGTSFIPGSVTVNGTSVSAASPSSGIPVGTIAVGGLATVTFQVSVASLPQPPQITNQATVSFTSGALTSSSQSDPVTLPVYQPIIGLTKTANTLNTQIGSTLVYSLTLTNTGNIAVIPVLSDNIPVGSELLPNSVVVNGILVPGASPITGITLGSLAPSGSITVSFQTIVSSLPTPPILTDQGQVNFTYSPPDGRVLSGTVTSNTVNVAVSAPNIQVTKTSSLAAAVVGDTIRYTLSITNSGVDSVTDTVVTDTIPAGTSFVPGSVLIDGVPFPNASPIAGIAIGNVAPGNTFIVSFQTSVQSLPQPPLLTDIASVTFTSGTFTGTAFSDPLIIPVFQPLITLTKASSTLNASVGDTLTYTITAVNNGNIAAALTISDNIPAGSSFLANSVSIAGSPQPGVSIETGVPVGSVLPGGTVSVTFQTVINALPNPQVLVDQASGSFTFQPPDGRTVSGSAVSNTVSISVSSPDVSIVKGTAATDAIVGDIITYTLAVSNNGISTANNIVVSDIIAAGSSFVNGSVTINGTSFPDGNPGFGIAIGMLAPGAVTTVTFQVRVDFLPTPAQLTNQASVSFTSGAFTGSSTSNVVTVPVFQPILTAVKTSSTNNATIGDIITYTIVVSNTGNIAASTTVSDNIPDGSVFLPNTVSINGIATPGASPVSGIPTPAIAPGQSATVTFQVLVSSIPTAVLLVDQAEVGYRFSAPDGREVGGFHLSNIVEVAVSPLDITLSKSVSSPFATTGDTLTYELVILNEDTDTVQNARLLDTLPEDIEFITDSVQINGSTVAGIDPSDGIPLPSLEANTKTLISFEVRIVATEQPGPRTNQARLLLTNGEESSAILSNPVTVAILQPVVNLTKLTNTESAHPGQSVTYSIITENVGNTGTFGLLTDLLAPDLSFVPGSVSVNGVAQYGVSPEQGIALGVIAPGEKTTTVFSALIVRASESGSLVNQASLTYSYQLPDGRSLDQEITSPSVSVKVAAADQGALSAVLRTTVSTVALGDAVPYQLTLVNDGGSVVTDIVLADYVPSGTIISPDSLKINGSPSASSKPGELLFIGSLQAGQTINVSYTVNVQSLPVGGYLDNNVRLQYADNGGASEVTSNTVTVAVFDPQLAANISTENKEALAGETLTYTVLLNNFGNITSEVILQNFIPAGTLYISGSLQLNGQSFAEANPAVGVCLGSVEPGQSLTLNYQVTVSETPPSGYIVNQAAFTYSFTLPGGRIVPGTLTTNTVTIPVVFPLLELVKQVNTYDASVGDTLTFTIQITNKGGISAQYPLFTDPLPHGLVYVPNSLTIQDKTQPGANPSTGITLPDIAPGETLTLTLQGQIREAPADGTFSNQATIEYTSRRSDGETLKETIQTNTVDLTVIAAIPKLTLSSSALRVAQEDTLSFTLQVENIGNTPLEELLLTAPFSAEDFLVLRTVTVNSVPLPHPNLLQGIPLGQLDPDHKAVIVFSFDIESALRAYLIAQAILRYQFRYPDGRVEKQSASSNTIFVEMADFDGSPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBU9</accession>
    <name>E3EBU9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373608.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11580"/>
    <dbReference type="EnsemblBacteria" id="ADO59073">
        <property type="protein sequence ID" value="ADO59073"/>
        <property type="gene ID" value="PPSC2_24075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5096"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_3_2_9"/>
    <dbReference type="OMA" id="CEIAIMI"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="21"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="22693" checksum="D9D885C28CBFC232" modified="2011-01-11" version="1">MLTQNSSSTTPVARLLEGSRVYLRPINVEDTEQYYNTLFHQEVRRLTGTQRSFTKEQIARYIEGKGQDASSLLLLIALQEDDRVIGDIALQDMDSLNRSANIRIAINEQGDQGKGYGTEALVLMLDYGFGICNLHRIELNVFDFNEKAIRCYEKVGFKREGVQRDALFYNHQYHDSILMSMLQHEYRNRYVKQAEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX6</accession>
    <name>E3EBX6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yurN3</name>
        <name evidence="7" type="ORF">PPSC2_24195</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373635.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11720"/>
    <dbReference type="EnsemblBacteria" id="ADO59100">
        <property type="protein sequence ID" value="ADO59100"/>
        <property type="gene ID" value="PPSC2_24195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5123"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_0_9"/>
    <dbReference type="OMA" id="FPYLING"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="218"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="264"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="74"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="33206" checksum="4645392DD4E9D6A3" modified="2011-01-11" version="1">MFKFSNLSYSKQRLAIIVAFSFIPLALLVTFAYLPVINMFKYSFSDWNGYSKRLEYVGFENYIKIFTDPEYFSVFKVSLYYFVATFVQMGLALYFATILSFQTWFKNFFKGILFFPSLMNGVAIGFIFLFFFKPDGTLDTLLQAVGLGSYVKLWLGNPEIINISLAGTSIWRYMGFNFIVFLGAISSISSDLYEAADIDGANRWHQFRSIILPTIKRILQLNLILAISGAISAFDIPYIMTGGSNGSKTFVIQTIDVAFKYSKVGLASAMAVVLLLIVIAVTLLQRLLIRGEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC07</accession>
    <name>E3EC07_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373665.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5194"/>
    <dbReference type="EnsemblBacteria" id="ADO59131">
        <property type="protein sequence ID" value="ADO59131"/>
        <property type="gene ID" value="PPSC2_24345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5155"/>
    <dbReference type="eggNOG" id="COG0577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051663_0_0_9"/>
    <dbReference type="OMA" id="VECIDIT"/>
    <dbReference type="OrthoDB" id="1776863at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="313"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="359"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="391"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="429" mass="49474" checksum="95B97E110D7B80EF" modified="2011-01-11" version="1">MRMVYSEVLESVQKNKSTTIFILLQITILFFLVTVLFLNFNHLVTKSSKTAALGAQDSFQLSDTLTNSDELKELMNQPMFLTKIKNFYNYVEKHIGEKYIYIFTQPVDLIHFEGADKAKFSQDYEQGFEPNVFTINNKGPYVSIKALQINKQGLDQFSIETDEGENLTAHDFNHVGHTSIPVLLGAEYKQLYKVGDILKGKYLLKDFEFYVKGFVKKDSLVFNANNPEIYLDRYIIMPAQQFTSVPDTKEDFNFQQKHYLQMINGDIWSSETEYFVRSKVEEAQKKTGFYDTQVLGANSPPLNFIFSALHENIMVLSVITITIFVVCILSISILMVTKLEKNMKNLSIHLISGATIMNILFYFIAEIAFLVIVPGLISLFLYTYLINFKMGSYFITILLSMLIIFALSTLLLYYKTRKLQVSMFLKRME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC75</accession>
    <name>E3EC75_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-369</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-369</name>
        <name evidence="1" type="ORF">PPSC2_01170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368861.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0231"/>
    <dbReference type="EnsemblBacteria" id="ADO54218">
        <property type="protein sequence ID" value="ADO54218"/>
        <property type="gene ID" value="PPSC2_01170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.222"/>
    <dbReference type="HOGENOM" id="CLU_1823472_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16297" checksum="0940E4F7659DA3C5" modified="2011-01-11" version="1">MNIESITVCEDTTSDFKPINITNTFYPEQSGSVQVLVQLSEIHTTTDVNFQWYISDEPEVPLATYTFSLERKSKKTRYAVGALDLRALLQLKEFNIFQKWFTIIEVEDSKRRVDFFLKKMGYGPSTLSNNFVNVPRINLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECH4</accession>
    <name>E3ECH4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcD1</name>
        <name evidence="2" type="ORF">PPSC2_01635</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368959.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14405"/>
    <dbReference type="EnsemblBacteria" id="ADO54317">
        <property type="protein sequence ID" value="ADO54317"/>
        <property type="gene ID" value="PPSC2_01635"/>
    </dbReference>
    <dbReference type="GeneID" id="66574657"/>
    <dbReference type="KEGG" id="ppm:PPSC2_01635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.327"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_1_9"/>
    <dbReference type="OMA" id="DWGHRRL"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="13886" checksum="F7C7F2AC2AC1C624" modified="2011-01-11" version="1">MGKKKYNISVEATLEVIGGKWKCVILCHLTHGKMRTSELKRMMPSITQKMLTQQLRELEEDGIVNRISYNQVPPKVEYELSEYGCSLKSILDSLCAWGERHIIKEYGDKSAVLEDNILNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECW9</accession>
    <name>E3ECW9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit PurS</fullName>
            <shortName evidence="5">FGAM synthase</shortName>
            <ecNumber evidence="5">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Formylglycinamide ribonucleotide amidotransferase subunit III</fullName>
            <shortName evidence="5">FGAR amidotransferase III</shortName>
            <shortName evidence="5">FGAR-AT III</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit III</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">purS</name>
        <name evidence="6" type="ORF">PPSC2_04230</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PurS family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007428837.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17045"/>
    <dbReference type="EnsemblBacteria" id="ADO54838">
        <property type="protein sequence ID" value="ADO54838"/>
        <property type="gene ID" value="PPSC2_04230"/>
    </dbReference>
    <dbReference type="GeneID" id="66574131"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.842"/>
    <dbReference type="eggNOG" id="COG1828">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_164833_3_0_9"/>
    <dbReference type="OMA" id="IENYRFE"/>
    <dbReference type="OrthoDB" id="2012814at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01926">
        <property type="entry name" value="PurS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003850">
        <property type="entry name" value="PurS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036604">
        <property type="entry name" value="PurS-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34696">
        <property type="entry name" value="PTHR34696"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02700">
        <property type="entry name" value="PurS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82697">
        <property type="entry name" value="SSF82697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00302">
        <property type="entry name" value="TIGR00302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 5" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="81" mass="9115" checksum="8B7C6EAFBAC5A6F2" modified="2011-01-11" version="1">MMKATVYVTIKQSVLDPQGVAVQGALHSMGFGEVDSVRIGKYMELNLDTTDRESAEKRVIEMCEKLLANTVIEDYRYELEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED71</accession>
    <name>E3ED71_PAEPS</name>
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        <submittedName>
            <fullName evidence="4">HD family phosphohydrolase</fullName>
        </submittedName>
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        <name evidence="4" type="primary">M1-580</name>
        <name evidence="4" type="ORF">PPSC2_02295</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO54428">
        <property type="protein sequence ID" value="ADO54428"/>
        <property type="gene ID" value="PPSC2_02295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02295"/>
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_92_9_9"/>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="GGDEF"/>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
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        <property type="entry name" value="HD/PDEase_dom"/>
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        <property type="entry name" value="HD_domain"/>
    </dbReference>
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        <property type="entry name" value="HD_GYP_dom"/>
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    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
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        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="PROSITE" id="PS51832">
        <property type="entry name" value="HD_GYP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
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    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
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        <location>
            <begin position="79"/>
            <end position="105"/>
        </location>
    </feature>
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        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="184"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
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        <location>
            <begin position="273"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="HD-GYP" evidence="3">
        <location>
            <begin position="418"/>
            <end position="613"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="616" mass="70954" checksum="1EA7C427089E27DE" modified="2011-01-11" version="1">MMSILKKLQERVTTTGIYVFFMCMVGLIVLLYTNHWSFLHYSTTEWVTIYSLLGAVLILEHFTFQLPPASNKQSMDSSVYLACIFVHGTEIAILILLFNVIIAAFRHTELSWWKHAVNFSIYALSIFVSSTVFELSGGTQGALNEDHFTSYLLALICYFTVNTITLGIYFYIAYKGSFNELKQAFLAESLLVYLCTLILSLVLTTLIYYNGILGLLLFLGLSMLLSHAFKQMFTMYREIEEKANTDRRTGLYNHSYFENTLEAELNISRSQNTPLSLALIDIDDFKKYNDHFGHLKGDQLLGFLGEFLKRETFGTHITVSRYGGEEFTLLMPDHTAEQAYEKVNAIRKRLNDSRYEGVEIFPHGCLSFSAGIAQSRIDIYDKSQLVDLADKALYYAKKQGKNIVHTHGSLNEVEREVDLGQDIRDLEQQLNLFLYKDINTFKHSKRVFRYAADMSDVLQLGPKDKRRFLLGALIHDIGKLEIPWNILNKKEKLSSEEWRMVQAHVMWGKRIVEANERFIDLVPFVELHHERYDGGGYPFGFKGEQIPRLCRMLTIIDSFDAMTTERPYQPTKTFEEAIEELRTCSGSQFDPELTAIFIQYIQHKQPAFTQSIEVGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDA3</accession>
    <name>E3EDA3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">PTS friuctose transporter subunit IIB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">manX3</name>
        <name evidence="9" type="ORF">PPSC2_02440</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369100.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09560"/>
    <dbReference type="EnsemblBacteria" id="ADO54460">
        <property type="protein sequence ID" value="ADO54460"/>
        <property type="gene ID" value="PPSC2_02440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.470"/>
    <dbReference type="eggNOG" id="COG3444">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116175_1_0_9"/>
    <dbReference type="OMA" id="IYLDERF"/>
    <dbReference type="OrthoDB" id="1696140at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00001">
        <property type="entry name" value="PTS_IIB_man"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="PTS_IIB_sorbose-sp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036667">
        <property type="entry name" value="PTS_IIB_sorbose-sp_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018455">
        <property type="entry name" value="PTS_IIB_sorbose-sp_subgr"/>
    </dbReference>
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        <property type="entry name" value="PTSIIB_sorb"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52728"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00854">
        <property type="entry name" value="pts-sorbose"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="PTS_EIIB_TYPE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="PTS EIIB type-4" evidence="8">
        <location>
            <begin position="1"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18039" checksum="CF4371E4FA64AAC9" modified="2011-01-11" version="1">MEISFVRIDDRLIHGQVATVWVKETKCNKIIAVSNEVAADTLRKTLLLQVAPPGIKAYVVTIAKAIEAYNNPKYNDFKTLFLFTNPTDVLRVVEGGVPFTSVNVGGMCFKEGKTQITGAVSVDKQDVEAFYKLHEKGIELEIRKVASDPKINLINKLQNVQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDM7</accession>
    <name>E3EDM7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TadE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tadE</name>
        <name evidence="2" type="ORF">PPSC2_06525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369966.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19490"/>
    <dbReference type="EnsemblBacteria" id="ADO55335">
        <property type="protein sequence ID" value="ADO55335"/>
        <property type="gene ID" value="PPSC2_06525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1344"/>
    <dbReference type="eggNOG" id="COG4961">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_857494_0_0_9"/>
    <dbReference type="OMA" id="PIGDWVE"/>
    <dbReference type="OrthoDB" id="1240973at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="331" mass="36768" checksum="55279629BE309A77" modified="2011-01-11" version="1">MSRKQRIFPINQYLRQACGLKQREQGSIVLEASLVLPLFLFFIIFLIYMVQMTLVSTALQTTASETVKQVSAKIYPVSLAVETASAKIDAVRKPLDELPKLSVSEYASQFAAQLPPPIGDWVENAVQGGQKPLEELRGRLTEAALDPVLKPMLKPFMEKSILEYDRIHITSVHVPSLTETKDPYFRVELSYELPMKVPFLYRNIVLQAAAEERLWIGDTGEGAGTGDETGDKDAQHSIQLLVKPEPAVKGVYNLIKAKVEPGMNATLSVLYKSGESTAQHLGWTSANADGIVEWNWFVGTNTTPGQWSFVIETEDGRRIEVPFSVQKTTDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEE7</accession>
    <name>E3EEE7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ferredoxin--NADP reductase</fullName>
            <shortName evidence="2">FNR</shortName>
            <shortName evidence="2">Fd-NADP(+) reductase</shortName>
            <ecNumber evidence="2">1.18.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ycgT</name>
        <name evidence="4" type="ORF">PPSC2_06820</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H(+) + NADP(+) + 2 reduced [2Fe-2S]-[ferredoxin] = NADPH + 2 oxidized [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:20125"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.18.1.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="2">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ferredoxin--NADP reductase type 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.18.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370029.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19790"/>
    <dbReference type="EnsemblBacteria" id="ADO55398">
        <property type="protein sequence ID" value="ADO55398"/>
        <property type="gene ID" value="PPSC2_06820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1405"/>
    <dbReference type="eggNOG" id="COG0492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031864_5_5_9"/>
    <dbReference type="OMA" id="FYSGMRD"/>
    <dbReference type="OrthoDB" id="692968at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004324">
        <property type="term" value="F:ferredoxin-NADP+ reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01685">
        <property type="entry name" value="FENR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022890">
        <property type="entry name" value="Fd--NADP_Rdtase_type_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="1 2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="3">
        <location>
            <begin position="8"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="37"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="287"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="328"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="344" mass="38028" checksum="0EFB3DBCEE4C9D90" modified="2011-01-11" version="1">MTESLELYDVTIIGGGPAGMYTAFYSGMRDMKTKLIEAKHELGGRMRIYPEKMIWDVGGVTPILCEKLIDQLEQQAKTFEPTIVLGQQITGLDRQEDGTFLLTSATGEQHWTRTIVLAVGYGILKMAKLEIEGADRYEVTNLHYTVQELEPFRDKHVLISGGGNSAVDWANELESIAASVTVVHRRDHFGGHEKNVARMKSSSVRVLTPYAVGQLHSNNGETIEQVTINHVDTGETEILNVDAVIVNHGLKSDFGPLRDWGLDMGEWHARVSDKLETNLPGIFAAGDFVEYGSKLYLIAGTFTDAALALNSAKLYIDPTADKAAYVSSHNSRFKEKNRELGVLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEL7</accession>
    <name>E3EEL7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endospore coat-associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yheC5</name>
        <name evidence="1" type="ORF">PPSC2_08180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370327.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20785"/>
    <dbReference type="EnsemblBacteria" id="ADO55704">
        <property type="protein sequence ID" value="ADO55704"/>
        <property type="gene ID" value="PPSC2_08180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1720"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_0_0_9"/>
    <dbReference type="OMA" id="AKPMIFD"/>
    <dbReference type="OrthoDB" id="1230237at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="42229" checksum="A257172F06C2C780" modified="2011-01-11" version="1">MNTRAEQKPVVAVLTVHDDEQFFKGNQRNFRDILETGTRMGYQVYIVTVRDLKLTDETVKGYIYNKNSQIWEEQNFPSPQVIYNRIPNRNYELKTSVRTKLDEIAHASGVELYNPGFFNKWELFKWLRTSESTRQLVPITKRLSNLSSLGKMLSAYPYLYLKPENGKAGKGIMILRFNPEHLMAYRLTIQHDKKSITYRSVSLSRLWGRIRREAGNSPYIIQQGIDLATYQKKPFDLRILVQKNARGAWSITGVGARLAGKGSITTHVPRGGSVEDPFMLLSSLFGPEDSTDLLNKVKSTAIQIARQIERASGLSHGEMSMDLGVDTLGTLWFFEANAKPMKFDEPDIRQKSLRRIFQYSSFLAERMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEX2</accession>
    <name>E3EEX2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spr1</name>
        <name evidence="4" type="ORF">PPSC2_00540</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368740.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13545"/>
    <dbReference type="EnsemblBacteria" id="ADO54095">
        <property type="protein sequence ID" value="ADO54095"/>
        <property type="gene ID" value="PPSC2_00540"/>
    </dbReference>
    <dbReference type="GeneID" id="66574859"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.106"/>
    <dbReference type="eggNOG" id="COG0791">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016043_8_1_9"/>
    <dbReference type="OMA" id="MHAVNDK"/>
    <dbReference type="OrthoDB" id="682655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000064">
        <property type="entry name" value="NLP_P60_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00877">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51935">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168856" evidence="2">
        <location>
            <begin position="29"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="NlpC/P60" evidence="3">
        <location>
            <begin position="25"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="17870" checksum="36F53E5E64F0B18C" modified="2011-01-11" version="1">MKKKLTIAAMGLAIAFTSFTFGGSSAFADSKMDQVIQDAKGTNYRSGGTTLEGFDCSGFTMYVFNKLGIKLPHQSGSQFKMGASVSRDEMRPGDLVFFNTTGRGVSHVGIFVGEGKFAHSSTSRGVVVSSLNENYYANRYVGAKRIMSTDAYHSVASDIPDDDNVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEX7</accession>
    <name>E3EEX7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yybB</name>
        <name evidence="2" type="ORF">PPSC2_00565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368745.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0113"/>
    <dbReference type="EnsemblBacteria" id="ADO54100">
        <property type="protein sequence ID" value="ADO54100"/>
        <property type="gene ID" value="PPSC2_00565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.111"/>
    <dbReference type="eggNOG" id="COG0491">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030571_2_1_9"/>
    <dbReference type="OMA" id="TLMWDED"/>
    <dbReference type="OrthoDB" id="733552at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="22"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27353" checksum="B4C96EC51D410AF5" modified="2011-01-11" version="1">MQLDKGIHMLQVSANIMGSIESIHPTLMWDEDNMILVDTAYPGQLSLLNEAILDTGLAIHKLTSILITHQDLDHIGSLADIIRASSSLVQVLASSIEKPYIQGEKQLIKLTPEAIDQAVSSMPESVPVEWRYAFRRTLENPPKAIVNSTIVAGEELPFCGGILVIDTAGHTPGHLSFYHKFSQTLIAGDALRVVSGKLLAPDPQYCCDFNIAKESLKNLLPYDIKKVICFHGGLYEGNCNQRISEICES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF29</accession>
    <name>E3EF29_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywjB</name>
        <name evidence="2" type="ORF">PPSC2_02935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369188.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0565"/>
    <dbReference type="EnsemblBacteria" id="ADO54549">
        <property type="protein sequence ID" value="ADO54549"/>
        <property type="gene ID" value="PPSC2_02935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.558"/>
    <dbReference type="eggNOG" id="COG0262">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043966_4_2_9"/>
    <dbReference type="OMA" id="GYIAKPN"/>
    <dbReference type="OrthoDB" id="1306955at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008703">
        <property type="term" value="F:5-amino-6-(5-phosphoribosylamino)uracil reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024072">
        <property type="entry name" value="DHFR-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002734">
        <property type="entry name" value="RibDG_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01872">
        <property type="entry name" value="RibD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53597">
        <property type="entry name" value="SSF53597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RibD_C" evidence="1">
        <location>
            <begin position="9"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="19854" checksum="5FD208805BEC5C7A" modified="2011-01-11" version="1">MKDLKSNEVVLYIAMSLDGYIAMPDGAVDWLYDVKGDGGDNGYAEFYDTVSTVLMGRLTYEEVLKLSDDFPYAGKPCYVLTRSLTEQQQAPHVTFTDEALSELVPRLQKQSEGLVWLVGGGQLVQAFMQAGLLEKAIIAIIPKVLGQGIPLFPEGTLPSTFQLQEIERRGDIVLLHYHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFI4</accession>
    <name>E3EFI4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amino acid oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370102.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1498"/>
    <dbReference type="EnsemblBacteria" id="ADO55475">
        <property type="protein sequence ID" value="ADO55475"/>
        <property type="gene ID" value="PPSC2_07170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1481"/>
    <dbReference type="eggNOG" id="COG0665">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007884_3_1_9"/>
    <dbReference type="OMA" id="NQFHYFR"/>
    <dbReference type="OrthoDB" id="1087129at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="30"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="412" mass="46535" checksum="5D5A6B13AA8BBBCE" modified="2011-01-11" version="1">MELIIGKTYWPNTLEQTLDFPPLAEDLNCDVLIIGGGMSGSICSRLLGEQQVDTVVIDKRKLVHGSSLANTGLLQYSNDKTLTSCIHTFGETNGVLFYRMCKDALDQLEKLSTTLDTDPTFIRRSSLYYASTWEDVLMLQEEYEQLTRFGFPVEFWDEQQVAARFPFRKPAALYTHEDAEVNPFCFAQGLLQSANRLGVRLYEHTEAKHFDFNDNEVVCHTSGGMIRAKKVVFATGYETQEIKADRGAVLESSYAIVTNPIEDAPLWHEQCLIWETARPYLYMRSTPEGRIIIGGLDEPILDASQREIRLLHQQQKLLQSLKEFFPGVPFQIDYAWAAVFGSSHDGLPYIGPHPRFPNCYFLEGYGGNGAVTSMMAAQLLADELTGIHRPEMELYSLTRSTKPSPETTEPMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFJ9</accession>
    <name>E3EFJ9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Homoserine O-acetyltransferase</fullName>
            <shortName evidence="6">HAT</shortName>
            <ecNumber evidence="6">2.3.1.31</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Homoserine transacetylase</fullName>
            <shortName evidence="6">HTA</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">metA</name>
        <name evidence="6" type="synonym">metAA</name>
        <name evidence="8" type="ORF">PPSC2_07240</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>acetyl-CoA + L-homoserine = CoA + O-acetyl-L-homoserine</text>
            <dbReference type="Rhea" id="RHEA:13701"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57476"/>
            <dbReference type="ChEBI" id="CHEBI:57716"/>
            <dbReference type="EC" id="2.3.1.31"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; O-acetyl-L-homoserine from L-homoserine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the MetA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.31" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370117.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20220"/>
    <dbReference type="EnsemblBacteria" id="ADO55490">
        <property type="protein sequence ID" value="ADO55490"/>
        <property type="gene ID" value="PPSC2_07240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1495"/>
    <dbReference type="eggNOG" id="COG1897">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057851_0_1_9"/>
    <dbReference type="OMA" id="WLWFCYQ"/>
    <dbReference type="OrthoDB" id="1601420at2"/>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00074"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004414">
        <property type="term" value="F:homoserine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008899">
        <property type="term" value="F:homoserine O-succinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019281">
        <property type="term" value="P:L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03131">
        <property type="entry name" value="GATase1_HTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00295">
        <property type="entry name" value="MetA_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005697">
        <property type="entry name" value="HST_MetA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033752">
        <property type="entry name" value="MetA_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20919">
        <property type="entry name" value="PTHR20919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04204">
        <property type="entry name" value="HTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000450">
        <property type="entry name" value="H_ser_succinyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01001">
        <property type="entry name" value="metA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 8" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="6 7">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="235"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for acyl-CoA specificity" evidence="6">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="6">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000450-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="35469" checksum="B74C7570A2C03B4E" modified="2011-01-11" version="1">MPIKIPDTLPAKEVLEGENIFVMDESLAYHQDIRPLRIAILNLMPTKETTETQLLRLVGNTPLQVDVTLVHMKSHVSKNTSQEYLNMFYKTFDEIKNSRFDGMVITGAPVEQLEFEDVNYWEEIRQIFEWTKTNVTSTMHICWASQAGLYHHFDVPKYGLDTKCFGVFPHTVIKPKVKLLRGFDELFYAPHSRHTEVRREDIDHIAELEVLSESEEAGVYLVATLDGKQIFVTGHSEYDPLSLKWEYDRDVAKGLDIDVPKNYFPNDDPERIPPSIWRAHANLLFSNWLNYYVYQETPYDIGPQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFK3</accession>
    <name>E3EFK3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yitT1</name>
        <name evidence="8" type="ORF">PPSC2_07265</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370121.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20240"/>
    <dbReference type="EnsemblBacteria" id="ADO55494">
        <property type="protein sequence ID" value="ADO55494"/>
        <property type="gene ID" value="PPSC2_07265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1500"/>
    <dbReference type="eggNOG" id="COG1284">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063199_1_0_9"/>
    <dbReference type="OMA" id="VIQMADP"/>
    <dbReference type="OrthoDB" id="1747063at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003740">
        <property type="entry name" value="YitT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02588">
        <property type="entry name" value="YitT_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="157"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="286" mass="31109" checksum="1B6BF3874EC58473" modified="2011-01-11" version="1">MKPASGDASRFPVFYTVIGGITASVGLELFLHPHDMIAGGVTGISRLMSLYTQEHFGLLLFVLNLPLMLLYSLFTHKPMLLRALPGLFAFSGSAIILSPFPAVSGHPVVCALGGGICIGLGAALTARHGGLLDSLGLSESDDGRPSTLVLTHRKIPLIQIVMLCNGLLLITAGFVLGWEPALYSALSCLAAYETTRLMFTGLRRMVCVVSKKQQTVEDAIYRRLRLHGTPIEGSAQIKGKMKSESDKKEQMVIVYSVHLLDLQRFKAVIQMADPQAEIMHMKCWET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFU0</accession>
    <name>E3EFU0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Carboxynorspermidine/carboxyspermidine decarboxylase</fullName>
            <ecNumber evidence="5">4.1.1.96</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">nspC</name>
        <name evidence="11" type="ORF">PPSC2_08690</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>carboxynorspermidine + H(+) = CO2 + norspermidine</text>
            <dbReference type="Rhea" id="RHEA:34099"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57920"/>
            <dbReference type="ChEBI" id="CHEBI:65070"/>
            <dbReference type="EC" id="4.1.1.96"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>carboxyspermidine + H(+) = CO2 + spermidine</text>
            <dbReference type="Rhea" id="RHEA:34095"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57834"/>
            <dbReference type="ChEBI" id="CHEBI:65072"/>
            <dbReference type="EC" id="4.1.1.96"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.96" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370431.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21165"/>
    <dbReference type="EnsemblBacteria" id="ADO55812">
        <property type="protein sequence ID" value="ADO55812"/>
        <property type="gene ID" value="PPSC2_08690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1830"/>
    <dbReference type="eggNOG" id="COG0019">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038560_0_0_9"/>
    <dbReference type="OMA" id="YTMVKTT"/>
    <dbReference type="OrthoDB" id="861683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045312">
        <property type="term" value="P:nor-spermidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06829">
        <property type="entry name" value="PLPDE_III_CANSDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022643">
        <property type="entry name" value="De-COase2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005730">
        <property type="entry name" value="Nsp_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43727:SF1">
        <property type="entry name" value="PTHR43727:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00278">
        <property type="entry name" value="Orn_DAP_Arg_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038941">
        <property type="entry name" value="NspC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="SSF50621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01047">
        <property type="entry name" value="nspC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn_DAP_Arg_deC" evidence="10">
        <location>
            <begin position="108"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR038941-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="379" mass="42819" checksum="EF6DB10F70767EF2" modified="2011-01-11" version="1">MNIDITGLPSPCYLVDERLLVKNLEVLNSVQERTGCSILLALKGFSMFSTFPLVGKYLKGVTSSSLFEARLGREKMDKEVHVYAPAYVDSEFDELLEYVDHIVFNSFDQLNRFKSRVQGVTSKKIDIGIRVNPEYSEIETPLYDPCYNNSRMGVTLANFRPEDLDGVDGIHFHTMCEQNSDTLERTIKVVDEKFGPYIKQMKWLNFGGGHHITREDYDLDTLVRCIQYFQDKYGVQVYLEPGEAIALNTGYLVATVLDTMKNGMDIAILDTSAECHMPDVLAMPYRPNIIGAGKPGEYAHTYRLGGLTCLAGDVIGDYSFKEPLKPGDKLVFCDMAHYTMVKNHMFNGVNLPAIASYNDEEGIKVIRQFSYEDFSSRLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG41</accession>
    <name>E3EG41_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cheY1</name>
        <name evidence="3" type="ORF">PPSC2_09925</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22395"/>
    <dbReference type="EnsemblBacteria" id="ADO56074">
        <property type="protein sequence ID" value="ADO56074"/>
        <property type="gene ID" value="PPSC2_09925"/>
    </dbReference>
    <dbReference type="GeneID" id="66577930"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2091"/>
    <dbReference type="eggNOG" id="COG2204">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_69_15_9"/>
    <dbReference type="OMA" id="AAGAHEY"/>
    <dbReference type="OrthoDB" id="1630092at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RESPONSE_REGULATORY"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="4"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="13344" checksum="675B477EF6EC932A" modified="2011-01-11" version="1">MANRILIVDDAAFMRMMIRDILSKNGFEVVGEAQDGSQAIEKFKELRPDLITMDITMPEMDGIAALKEIKQIDPNAKVIMCSAMGQQAMVIDAIQAGAKDFIVKPFQSDRVIEAINKTLGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGR3</accession>
    <name>E3EGR3_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Terminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xkdP</name>
        <name evidence="2" type="ORF">PPSC2_05660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18565"/>
    <dbReference type="EnsemblBacteria" id="ADO55147">
        <property type="protein sequence ID" value="ADO55147"/>
        <property type="gene ID" value="PPSC2_05660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1153"/>
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        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077348_0_0_9"/>
    <dbReference type="OMA" id="FQFPVNP"/>
    <dbReference type="OrthoDB" id="1884225at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysM" evidence="1">
        <location>
            <begin position="162"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="23900" checksum="05669F45C6F08AD1" modified="2011-01-11" version="1">MEFSLTDGKGKKFQFPVNPEEVTISRQKGFDTTTILSYGEFDFPQGEKVKEISFSSFFPKEYNPAYCTYEDIPDPQEAMNTLNGFLLSKSPLRFIITETAVNVPVIVASHNSTFRGGEYGDVNFDLSLRTWSEMKVVKKAGTSLKSATVNKKPRTDMKEKKKTYTVKSGDSLSKIAKVELGDSSQWSRIYQLNKKIIGKNPNAIKPGQKLVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH00</accession>
    <name>E3EH00_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Kanamycin nucleotidyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aadD</name>
        <name evidence="2" type="ORF">PPSC2_07570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370187.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1583"/>
    <dbReference type="EnsemblBacteria" id="ADO55560">
        <property type="protein sequence ID" value="ADO55560"/>
        <property type="gene ID" value="PPSC2_07570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1564"/>
    <dbReference type="eggNOG" id="COG1708">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105081_0_0_9"/>
    <dbReference type="OMA" id="DIEMFCV"/>
    <dbReference type="OrthoDB" id="702172at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012481">
        <property type="entry name" value="KNTase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07827">
        <property type="entry name" value="KNTase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="KNTase_C" evidence="1">
        <location>
            <begin position="115"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="28465" checksum="571F522E3843A53F" modified="2011-01-11" version="1">MNMNGPIHVSRIERFQTCHEIAARLHEVYRDKILAIGVYGSVAKGTDGPFSDIEMFCVLSESNAPVDFSHEWSAGPWKAEVNVCSSDILLKTASTVEGDWPLTHGPFFSPLRLYDFFSILKEAAESPTREDFRHAINEVLVGEMYEFIGKLRNVSINGPRTFLPYLIMQFAQYGAMLVGLHNQKLFSTGSMVLPEALELPSRPQGFDHLVKMVMSGDLAESTKIISACENFWSGLVSWAVEHDYHMNSQRIPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH74</accession>
    <name>E3EH74_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cold-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cspB</name>
        <name evidence="4" type="ORF">PPSC2_08935</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370483.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21400"/>
    <dbReference type="EnsemblBacteria" id="ADO55865">
        <property type="protein sequence ID" value="ADO55865"/>
        <property type="gene ID" value="PPSC2_08935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1883"/>
    <dbReference type="eggNOG" id="COG1278">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117621_6_1_9"/>
    <dbReference type="OMA" id="FICKDQG"/>
    <dbReference type="OrthoDB" id="2034748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019844">
        <property type="entry name" value="CSD_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00352">
        <property type="entry name" value="CSD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="7179" checksum="2A6E2E72F3B87F1C" modified="2011-01-11" version="1">MKGTVKWFNAEKGYGFIQVEGGEDVFVHFSAIQGDGFKTLEEGQEVEFEITEGNRGPQAANVIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH81</accession>
    <name>E3EH81_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55872.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21435"/>
    <dbReference type="EnsemblBacteria" id="ADO55872">
        <property type="protein sequence ID" value="ADO55872"/>
        <property type="gene ID" value="PPSC2_08970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1890"/>
    <dbReference type="eggNOG" id="ENOG5033NK8">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_206940_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55872.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7525" checksum="E79D020985B4C5BD" modified="2015-05-27" version="2">MEMETVKLSDIVLRWYPEMLPSLKKNELNSMIVLRDGLSILKPTDALEIIQYSICEHQDNNYLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH82</accession>
    <name>E3EH82_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">YitT3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yitT3</name>
        <name evidence="9" type="ORF">PPSC2_08975</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370491.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21440"/>
    <dbReference type="EnsemblBacteria" id="ADO55873">
        <property type="protein sequence ID" value="ADO55873"/>
        <property type="gene ID" value="PPSC2_08975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1891"/>
    <dbReference type="eggNOG" id="COG1284">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063199_1_0_9"/>
    <dbReference type="OMA" id="CAMTHLE"/>
    <dbReference type="OrthoDB" id="1265821at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019264">
        <property type="entry name" value="DUF2179"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003740">
        <property type="entry name" value="YitT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10035">
        <property type="entry name" value="DUF2179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02588">
        <property type="entry name" value="YitT_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006483">
        <property type="entry name" value="Membrane_protein_YitT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="102"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="142"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="168"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2179" evidence="8">
        <location>
            <begin position="214"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF10035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="29680" checksum="F92C0975AA25557D" modified="2011-01-11" version="1">MLKKVLNCLTVILGAAAIACGFNLFLVPHHLLSGGVAGLSMLIGYFTKFDISTMYFIINIPMLIAGWFILGKRFISLSILSVIVTTWILAWVPVHSVVSDPLLASVFGGVMVGIGAGISFRVGGSTGGFDIIGSIVTTYRDFPVGTVLVGMNGLVILAAGYLNDDWNIALASMLSIFVTGKVLDQIYVSHTKITVYIITEHTDKLLSRMLTTPRGVSKIKIEGAFSHTEKDMLMTVTTRYELVELKRIIKEVDPSAFVNIVETVGVMGSFRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHK4</accession>
    <name>E3EHK4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Isochorismatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yueJ</name>
        <name evidence="2" type="ORF">PPSC2_10305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370764.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22775"/>
    <dbReference type="EnsemblBacteria" id="ADO56157">
        <property type="protein sequence ID" value="ADO56157"/>
        <property type="gene ID" value="PPSC2_10305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2171"/>
    <dbReference type="eggNOG" id="COG1335">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068979_12_1_9"/>
    <dbReference type="OMA" id="ICGTLAN"/>
    <dbReference type="OrthoDB" id="1442962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isochorismatase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="21100" checksum="D597A57A6A57C85A" modified="2011-01-11" version="1">MKALIVIDYTKDFVDGSLPVGQPAIELDERITAITQAYVDQGDFVVMAVDLHEENDLYHPESKLFSPHNIRGTNGRQLYGKLHSLYKQQSDRIYWLDKTRYSAFAGTDLELRLRERGILEVHLIGVCTDICVLHTAVDAYNKGFAITVYKDAVASFNQAGHDWALGHFEGSLGATVRSAEDTLLLQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHS1</accession>
    <name>E3EHS1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">tet1</name>
        <name evidence="9" type="ORF">PPSC2_11090</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370939.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23480"/>
    <dbReference type="EnsemblBacteria" id="ADO56333">
        <property type="protein sequence ID" value="ADO56333"/>
        <property type="gene ID" value="PPSC2_11090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2350"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_3_0_9"/>
    <dbReference type="OMA" id="LMYSPIV"/>
    <dbReference type="OrthoDB" id="1108236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="16"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="165"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="198"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="221"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="288"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="318"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="345"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="378"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="421"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="13"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="458" mass="49904" checksum="12141395C1909F9F" modified="2011-01-11" version="1">MIKEQTYPNADKLMRVLAFTLVFSVMNAFMFNVVMPVIREEFHISASDVSWLLTGYMIVYAVGSVTYGKLADKYRLKDLLTFGIIFFALGSLIGLLANQFWMLIVARLLQATGAAVIPATAMIVPVRYFSAEKRGRALGVTAIGLALGTALAPIISGLITGFASWRFLFVISMLPLIALPFFRKYLDDQRGKDQKFDFLGGLLLGGTVACLLLSISQANMMFFLIGVVLFGLFIWRIHTAHDPFIQPKLFRNKQYSYGLLIAFLGTGISFGLPYLAPQFLNSLNQLTPATIGLIMFPAAIASALLGKKGGRLADSKGNSVLVYTAVSLLFICFISLSTFVGASPYLILFLLIFGNVGQTFMQIAMSNTISRTLSKDQIGVGMGLLSLLNFIAGAMTTSILGKTLDSSSSFHLNPVVSNVQVFNFSNIFTVLALIALVTMGLYALQFRRGPRGNTPAVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI87</accession>
    <name>E3EI87_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lysophospholipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-904</name>
        <name evidence="2" type="ORF">PPSC2_03860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54755.1"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="EnsemblBacteria" id="ADO54755">
        <property type="protein sequence ID" value="ADO54755"/>
        <property type="gene ID" value="PPSC2_03860"/>
    </dbReference>
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    <dbReference type="eggNOG" id="COG1073">
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    <dbReference type="OMA" id="VIRASWF"/>
    <dbReference type="OrthoDB" id="721431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
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    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="31"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="30914" checksum="17FD425C1F1FA282" modified="2011-01-11" version="1">MSETIVVEAGTDAGTDAVIRASWFPAKNTAKSLLIIAHGYKGFKDWGMFPFIAEALSMDNHVVTFNFSHNGIGEDLENFTELEKFARNTYSREQEDLELLLSDLRARHEFRELPLFLLGHSRGAGSCFVYALDHPGEIAGVISWNGVTNLDLFTLPQKEEMRAKGRSYVQNARTGQQLPLDAIILDDLEHNRERFSIVDRLANSQLPAVLIQGTEDSKRLREGSAQLTSVRPDIEWVQIQGGNHTFNTVHPFQGGSLQLDQAITETRRFIDRITN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJA6</accession>
    <name>E3EJA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">BacA1</fullName>
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        <name evidence="2" type="primary">bacA1</name>
        <name evidence="2" type="ORF">PPSC2_11390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56393.2"/>
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    <dbReference type="EnsemblBacteria" id="ADO56393">
        <property type="protein sequence ID" value="ADO56393"/>
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    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Condensation" evidence="1">
        <location>
            <begin position="4"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56393.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="32983" checksum="A1B7CB8B9E5986C3" modified="2015-05-27" version="2">MEPLPIQYKDYAVWQQQEMQRESYQRREQFWLEHLAGELPVLDLPIAYPRPAVRSFEGATYEFTVDPNVSEQLRQVAAQTGSTLYMVLMSAYTVLLSKYSGQDDLIIGTPVAGRLLPELEPLIGMFVNTLAIRHQPQGNSTFHSYLLEARERTLQAFEHQDYPLEELVEKLDIVRDASRNPLFDTMFVLQNTESQEAKLETLSFSPYVQEHRISKFDLTLSMSDEDGQIKGSFEYCTKLFGADAIERLTGDLIAILSQVAANPDLQLSDIQVNLGEQAKGFSPDSIDFVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJF9</accession>
    <name>E3EJF9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">betI5</name>
        <name evidence="3" type="ORF">PPSC2_11920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371114.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24240"/>
    <dbReference type="EnsemblBacteria" id="ADO56509">
        <property type="protein sequence ID" value="ADO56509"/>
        <property type="gene ID" value="PPSC2_11920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2525"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_110628_0_0_9"/>
    <dbReference type="OMA" id="TIDIVGM"/>
    <dbReference type="OrthoDB" id="2089619at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="22618" checksum="8C2719C56E582E3B" modified="2011-01-11" version="1">MSHPDKKQQTKEKILQSTLEFIQKEGFEAVTIRKIADLSSTNISLVNYYFGSKENLLSEAIEVILNSFQHTFSVLDNTAMPPRDRLKQFLLNYLQVIRQYPELLSRIIVMGSTPFTSQQEYGRFLNMMGFPKVQNTIKELTGEQQPERLLAMMLQIFGAIFLPALMSPILESGAVVEMPTIEEQLNLLFERYFDQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJH9</accession>
    <name>E3EJH9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yurO3</name>
        <name evidence="2" type="ORF">PPSC2_12030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371133.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24355"/>
    <dbReference type="EnsemblBacteria" id="ADO56529">
        <property type="protein sequence ID" value="ADO56529"/>
        <property type="gene ID" value="PPSC2_12030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2545"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_12_0_9"/>
    <dbReference type="OMA" id="AKEKWIT"/>
    <dbReference type="OrthoDB" id="1746871at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168479" evidence="1">
        <location>
            <begin position="31"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="433" mass="48173" checksum="F2554C884FDB804F" modified="2011-01-11" version="1">MKKNLRIWSSALLVLTMSVGLVACGEDNSASSNNGSGDGTIKLKVYAQHFDDDTIKPFDYAVEELKKKMPDVEIELDPAVQDGGQKLKTYAATGNMPDIYLADWPVLQTFAKSKNVEVLDNYDTTAEFKKNLNPGVESRLVAPDNHVYAYPETGIEFQMIYYNKSIFEKVGIKTPLKTIDQMADAAKKLKAAGYVPMSIFAKEKWITTAFYNGLVTREQPRGFGALEEKGVKALPEAFVTAAQQMKQLQRAGLFDANATNTNYDQASSLFYQGKAAMFVNGQWEIYSSQEKLGDQVDWMYWPAKDEATYENSKYFIDGSGSPQGYAVSANSKNKETAVKVAAFLASKSAEYRYSQLGSPIVPVKVDKPMASNVPAMMQRVVKELLPNAQEYAQLLSNTKIQNTINDNTQNMMVDNFSENDFVSNLNNTLNKEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJK2</accession>
    <name>E3EJK2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371156.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24490"/>
    <dbReference type="EnsemblBacteria" id="ADO56552">
        <property type="protein sequence ID" value="ADO56552"/>
        <property type="gene ID" value="PPSC2_12140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2567"/>
    <dbReference type="eggNOG" id="COG3506">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082825_0_0_9"/>
    <dbReference type="OMA" id="NRYDQAG"/>
    <dbReference type="OrthoDB" id="1485526at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009784">
        <property type="entry name" value="DUF1349"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35332">
        <property type="entry name" value="PTHR35332"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07081">
        <property type="entry name" value="DUF1349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="23285" checksum="D12AE676187A2F34" modified="2011-01-11" version="1">MTKKRMEWEEGNWINSPLYARKEGDFLKVAPEKGRDFWKKTLYGFEFEDGSALLSDWNNNTAVEVSFQLASFTELYDQAGILLYHGPEQWIKAGIEINDGIPQLSTVVTAGYSDWSLAAVPEWVGEEVTLRASIIKDAVVIRARTENHGWRTIRVARFPYTTGNQAGPYTCSPTREGFEVTFTRWHFTERDQDLHSDPPVEHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJX5</accession>
    <name>E3EJX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0605"/>
    <dbReference type="EnsemblBacteria" id="ADO59994">
        <property type="protein sequence ID" value="ADO59994"/>
        <property type="gene ID" value="PPSC2_28215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5983"/>
    <dbReference type="HOGENOM" id="CLU_1080359_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009036">
        <property type="term" value="F:type II site-specific deoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019068">
        <property type="entry name" value="Restrct_endonuc_II_MjaI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09568">
        <property type="entry name" value="RE_MjaI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="27730" checksum="A0279D2B61D26BA7" modified="2011-01-11" version="1">MELFQNLIELRKFRSTNAMWNSLQLNSPMSVGYVTNLIESRTFSNKEEWRDFYYQSGHERIRLGSIRGMSKELNLNYGRTEEELKGYGQKMYAELQKSGNPLNITLAECVFMVKYRVMGETWNGVIMREKNTIENMTKIFPYCSFEKVEGEADYKYAIDYEMCLEGRLVCALQIKPMSYEKGFSPEIMKAKRANKAKNDLYVKENGVPVYYVYSKADGTIINHDVVSLLKHSLQMPSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK18</accession>
    <name>E3EK18_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386141.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59727">
        <property type="protein sequence ID" value="ADO59727"/>
        <property type="gene ID" value="PPSC2_26540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5597"/>
    <dbReference type="eggNOG" id="ENOG5032K8B">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2808419_0_0_9"/>
    <dbReference type="OrthoDB" id="2200700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7448" checksum="8B4E402442B052F0" modified="2011-01-11" version="1">MLIYNGETVAITVVAEGNPFTVIQPGEYAELAGFTAHEFYVQEPGEWYAKREHCHSGADIEIYNAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK56</accession>
    <name>E3EK56_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386179.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0375"/>
    <dbReference type="EnsemblBacteria" id="ADO59765">
        <property type="protein sequence ID" value="ADO59765"/>
        <property type="gene ID" value="PPSC2_26345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5552"/>
    <dbReference type="HOGENOM" id="CLU_2845731_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="7487" checksum="25C4AE23BD62BFD5" modified="2011-01-11" version="1">MIKDRQLTEGEHYTDNKTERLIKSISVEDDLLTYIENPDGGHVLGRSSIQSFVEWGEHQGRLQSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK66</accession>
    <name>E3EK66_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386189.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0385"/>
    <dbReference type="EnsemblBacteria" id="ADO59775">
        <property type="protein sequence ID" value="ADO59775"/>
        <property type="gene ID" value="PPSC2_26290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5537"/>
    <dbReference type="HOGENOM" id="CLU_1642080_0_0_9"/>
    <dbReference type="OrthoDB" id="2179497at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="161" mass="18372" checksum="FB7E5E5A251CF0C5" modified="2011-01-11" version="1">MKPMSEPQRNAIENIEKNTGIKFEGPKTAQAAFLFLNKHIEKARKPMSKKQRAAIGVIEEILGIKFAGEESAQGAFLFLSKHIETAQKKVQEMIEEERKKSSVVSQARFDPMEDFLLDQMALYRFDDAHNGWGDADDDDSYAVTPTVDSLRDDLIFWSRFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK80</accession>
    <name>E3EK80_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385821.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0012"/>
    <dbReference type="EnsemblBacteria" id="ADO59407">
        <property type="protein sequence ID" value="ADO59407"/>
        <property type="gene ID" value="PPSC2_28020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5939"/>
    <dbReference type="HOGENOM" id="CLU_2808422_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7430" checksum="09ED6B6460A45175" modified="2011-01-11" version="1">MDPAEFAKSLFKGETTFNNGGKQVRYIVGFDGFYVYYKTKLTSNRTRGESAASFMKWAKGVGAISCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK82</accession>
    <name>E3EK82_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lytic murein transglycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_28010</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0014"/>
    <dbReference type="EnsemblBacteria" id="ADO59409">
        <property type="protein sequence ID" value="ADO59409"/>
        <property type="gene ID" value="PPSC2_28010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5937"/>
    <dbReference type="eggNOG" id="ENOG5033WTH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1459966_0_0_9"/>
    <dbReference type="OrthoDB" id="1444566at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168490" evidence="1">
        <location>
            <begin position="36"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="SLT" evidence="2">
        <location>
            <begin position="64"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="21315" checksum="EB3CCAF6C0D2823A" modified="2011-01-11" version="1">MNKLQEKYSIQKCIVYLMLLAVTIGGVLFPQTIMAQTPKSFKYVKEIPMPKQEQKYLYQKVKVRGLDYEETLATILQESSFHSNVVDSGNYGYFQVNKVNHAYLAQTLKTANKPLDPFVNMDWGTFVLSNLYKKYAAKGLKNRDLKEAVLSTYNKGEGGYKRTGKATKYIKKHDQSLKYIQKLMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK94</accession>
    <name>E3EK94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_27955</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0027"/>
    <dbReference type="EnsemblBacteria" id="ADO59421">
        <property type="protein sequence ID" value="ADO59421"/>
        <property type="gene ID" value="PPSC2_27955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5923"/>
    <dbReference type="eggNOG" id="COG1404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_304799_0_0_9"/>
    <dbReference type="OrthoDB" id="1452706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1270">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041909">
        <property type="entry name" value="Sbi_C3_db_domIV"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169299" evidence="3">
        <location>
            <begin position="41"/>
            <end position="974"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="598"/>
            <end position="687"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="974" mass="108070" checksum="37CCF138E37341E0" modified="2011-01-11" version="1">MNILNKNMKKTLLIALSSSMIMGGAIQIGQSFVNPIVANAASSDVLKGSDGLNYQVYLRDDGSASISRDNGGALKRLSTPLDAGETPDKITSLRFVGNDVEVVFTTSKGNTKTLNFVDVIHMPDVIPDFKYESNPKWGTAVIYLPVFSENRAYKYQVKVGPYGQWIDEDRNIDVKENIEHYIRAVDFDGKIFAERTVGINDLLFMTNMSVTTPAGMYTVEFRSTNGGLSLKNEQNKTIASDFASKSEYTPTHMVGYAWDGNDLLVKVAYKKNTNGITTTDNVRFFNVIKADVAPVKPTIQANTTNPTNKNIQVTITYSADSATKEYKIGENGEWKTYASSFEVSQNTKIYARAKNARGTLSDEAVMNISNIDKTAPQATNIIVDQNKLTLTGGADAEGTSKLMYKLNGQDWVVYTETVVLPNGEYEIQSKAVDASGNESSVASQKVTVFVVDLAQATEAVVKAENAPSQTHVTNAQTLIDALPQVDGKDQLQVRLDKVKDDLAKYEAIQKEINTMNDTLNKGNVKKEVVLQYLKRIDELYDLVKALPNTMDKATLNKQLDDLKNKLILIGKILELNSDGDHQDVDLGGLEDTVNKLPNGDLKDDLQKQLDQAKDLQDAIKKVEKAEQSKSQEDIDRARDAVNKLPDGKVKDELNDRLDKIQKEVDEANKYEKAVKKAEQTKSQTDVNTARDVVNTLPDGAEKDAYHKRLDAVDTALKEATLKVRQAEMYLRDPYLTDAQKQVDALKDSPAKKALQDRLDAVKKAIRDKAYKDLLDKAIQKVEQAELYKRDPYIKNAYDAVNALPDGADKTGLLDRLDKINKGTTNPVDDKDGQYVPGDNIGDVAGTIKDPIAKKAYVDWAKAVERAEKYFSKGNIVFALEKMNEVPTSVRENSKYSALYNEMKQRSEVLKQTFNQMLTDKDLEQANKAATDAVEQYEKFKTGIFKEKAQSAVNKLENGTVKSGLQSRIDAVNKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKD9</accession>
    <name>E3EKD9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385880.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0072"/>
    <dbReference type="EnsemblBacteria" id="ADO59466">
        <property type="protein sequence ID" value="ADO59466"/>
        <property type="gene ID" value="PPSC2_27735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5877"/>
    <dbReference type="HOGENOM" id="CLU_2918390_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="6812" checksum="9B98725AA2BB71B4" modified="2011-01-11" version="1">MTKVLKKLKNRAGYVSVETVIVAGLIIALGAYAISQFYTTSQATTEWSMQNINKIYDVKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKX0</accession>
    <name>E3EKX0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNase H type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386289.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0486"/>
    <dbReference type="EnsemblBacteria" id="ADO59875">
        <property type="protein sequence ID" value="ADO59875"/>
        <property type="gene ID" value="PPSC2_25800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5425"/>
    <dbReference type="eggNOG" id="COG0328">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1775632_0_0_9"/>
    <dbReference type="OrthoDB" id="1122642at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002156">
        <property type="entry name" value="RNaseH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13456">
        <property type="entry name" value="RVT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase H type-1" evidence="1">
        <location>
            <begin position="32"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="16529" checksum="3E53ADEAFD9D4A72" modified="2011-01-11" version="1">MTTFKVYTDASSRYKAIVEDVGSERQLRKVYPSSIGAVIKDGEQVVGAISERIGFSDSNYAEFLAMYTACRYLIDHNISKVDFYADCLNLVMMVNQQIISGIPELRKLSYAILDCLNQIENYTITWIPRNSNKEAHHMAAQAFKVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKX9</accession>
    <name>E3EKX9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Hydrolase_4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386298.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0495"/>
    <dbReference type="EnsemblBacteria" id="ADO59884">
        <property type="protein sequence ID" value="ADO59884"/>
        <property type="gene ID" value="PPSC2_25545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5415"/>
    <dbReference type="eggNOG" id="COG2267">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1004159_0_0_9"/>
    <dbReference type="OrthoDB" id="1119700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="37"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="30649" checksum="4047AED0E6AAED0F" modified="2011-01-11" version="1">MKTNELFQEEDMAWVNEQRIAYTLTTAGKARHANATTFLMIHGAMMNSLATAELAKDLAVEYPTGIVCQVDLPGHGNSIGEPLQSISDIAIVVKLFITDMTSKGLFTENLVLVGHSMGGSICMQLMLDGVKAKQLILLSSAPEWKSLIPLSEIPYLQGVIQDTFEHMMMEDFKINITPEEQSKLNTQIPKMMASSQACIYDLQAMVKFALKEHIVGIKVPVLVVYGDNDSTATLENQNFMINTFTNVTNTKIAGATHTTVIRNVMDVVKAIRQFFEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKY7</accession>
    <name>E3EKY7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386306.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0503"/>
    <dbReference type="EnsemblBacteria" id="ADO59892">
        <property type="protein sequence ID" value="ADO59892"/>
        <property type="gene ID" value="PPSC2_28700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6090"/>
    <dbReference type="eggNOG" id="ENOG5033BSM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_969259_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043733">
        <property type="entry name" value="DUF5677"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18928">
        <property type="entry name" value="DUF5677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="287" mass="33497" checksum="0A47A2C8BAE8CA65" modified="2011-01-11" version="1">MNIERHRLDSKTENNLNQLGDMVLFIENLMEECLNQVDGKVPNEVLIPILIHRHLLQKADSIHANIDVGAEDASKAIMRTLIENYIYLAYILHSKTDEKSKAYYLAWYKSLKAELQKFQSDHKKSPIINSFLGGELDHLFPGESVQAEIDWIDKKIKAPWLKEINKKWNKVQRKANQSYINWHALFGHPKIRHVAVSVGMEAEYETLYSIYSQETHSTNAMRLLEHRDGISYFKPLRAYEDPDTIISMASTYLWRATDLTLRKLFPEKQSAFHLYSINKQGRLHDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELC2</accession>
    <name>E3ELC2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386368.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0565"/>
    <dbReference type="EnsemblBacteria" id="ADO59954">
        <property type="protein sequence ID" value="ADO59954"/>
        <property type="gene ID" value="PPSC2_28415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6027"/>
    <dbReference type="HOGENOM" id="CLU_163219_0_0_9"/>
    <dbReference type="OrthoDB" id="2217784at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12752" checksum="70E38E814991B5FD" modified="2011-01-11" version="1">MMITKEVMAFGMKVKIACDAQCDRAFGINGRPKEQLSDAPDDYAFLSDDEVGIAPESGKTKIMSEGGDMKPVRPDERLNRWCLRECERCERGAIGEEIWLKDWSKPVYNMMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELD4</accession>
    <name>E3ELD4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59966.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0577"/>
    <dbReference type="EnsemblBacteria" id="ADO59966">
        <property type="protein sequence ID" value="ADO59966"/>
        <property type="gene ID" value="PPSC2_28350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6013"/>
    <dbReference type="HOGENOM" id="CLU_1968399_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59966.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="14954" checksum="A1E42B0DF5E7E806" modified="2015-05-27" version="2">MNWYLNEQKKKKDRRNANDVAMINRKLKEVLQGISYKIDRSKYKQEVKQAERNLVSCSIWDIHYRNNMENANVALSQALLISCIINKENKSGNEHVQREVDILMRKLGNVDLGIYLEYNKLKGRSVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELE2</accession>
    <name>E3ELE2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386388.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59974">
        <property type="protein sequence ID" value="ADO59974"/>
        <property type="gene ID" value="PPSC2_28310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6005"/>
    <dbReference type="HOGENOM" id="CLU_2194369_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="56"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="12678" checksum="90AE16DAF36A3433" modified="2011-01-11" version="1">MNLFPDVEELIQTENLLSSTTYPHRKQTYCAYCGSQVIGDVTFRKKECFSINHCHCESAIEELKIKAQLIRKLEQLESMKQKMNLQRIGNALYEDGVERLRKKYHPNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBU1</accession>
    <name>A0A0D5ZBU1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cupin_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44245">
        <property type="protein sequence ID" value="AKA44245"/>
        <property type="gene ID" value="PPSC2_12555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2665"/>
    <dbReference type="HOGENOM" id="CLU_2899964_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="6772" checksum="C47C9DD36E47432E" modified="2015-05-27" version="1">MKVVVQIFKPGGHNKAHCHTNVALNLVFQGEGYSIVDGEKIELKKGDLFLAPPCSAHEHCNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCG5</accession>
    <name>A0A0D5ZCG5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886233.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44333">
        <property type="protein sequence ID" value="AKA44333"/>
        <property type="gene ID" value="PPSC2_25850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5430"/>
    <dbReference type="HOGENOM" id="CLU_186079_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10898" checksum="DD89420380395053" modified="2015-05-27" version="1">MLSLILSVIFTSILILDMRLHSREDKDERWDLIMQRPLTIAFLLLIIGYSAMNLLDIFLKFSFSAYRNGIDIIFTGVLVIYIIVLIIEKRKYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G8</accession>
    <name>E3E4G8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">F0F1-type ATP synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371470.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01300"/>
    <dbReference type="EnsemblBacteria" id="ADO56867">
        <property type="protein sequence ID" value="ADO56867"/>
        <property type="gene ID" value="PPSC2_13610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2896"/>
    <dbReference type="eggNOG" id="ENOG502Z9TN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073019_0_0_9"/>
    <dbReference type="OMA" id="KKPYAYV"/>
    <dbReference type="OrthoDB" id="642875at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="37489" checksum="2D5E687645F87179" modified="2011-01-11" version="1">MKITDFAVIFVLLFLPFGVVSDLRVQNQREVQQLEMKYTSALRTAVQDAGVVLSQNERQEREAGYGSDKFFRVDKEEALTTFLHTFFLNMGIDGDTAAQRALLDYIPVIVILDYDGYYTFASATYKDAYGQAVIGHKWSEKKPYAYVDAAGNSVGFTLDNYLHAYDARNQRWVEGFQKELESQTPISLLNNSLTFEQMRRSTIVRTVQEDLARMINVHNEKAARNGISYTFTLPLIPQEEWYNTIDDVGMIAFIQGIPVGDRYYNNYGFGGGRVVRKQSIIGGIEPGTGMKYFYRDSYPAPFQAVERFTDEKSAAAAGYFEYKYHNSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4K2</accession>
    <name>E3E4K2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Multidrug resistance protein SMR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ykkC1</name>
        <name evidence="6" type="ORF">PPSC2_13760</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371503.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2936"/>
    <dbReference type="EnsemblBacteria" id="ADO56901">
        <property type="protein sequence ID" value="ADO56901"/>
        <property type="gene ID" value="PPSC2_13760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2932"/>
    <dbReference type="eggNOG" id="COG2076">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133067_1_0_9"/>
    <dbReference type="OMA" id="EVFWVIG"/>
    <dbReference type="OrthoDB" id="1990300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000390">
        <property type="entry name" value="Small_drug/metabolite_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045324">
        <property type="entry name" value="Small_multidrug_res"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30561">
        <property type="entry name" value="PTHR30561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00893">
        <property type="entry name" value="Multi_Drug_Res"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="29"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="58"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12038" checksum="A891075DB6BCD949" modified="2011-01-11" version="1">MNKTWFSVIVAAIFEVAWVSGLKHADSFLEWSGTVIAMYISFYLMIKASRSLAVGTVYAVFVGLGTAGTVVVEILLFGADISVSKVALIRLLLIGVIGLKILSKKKEEVSGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U3</accession>
    <name>E3E4U3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Anthranilate phosphoribosyltransferase</fullName>
            <ecNumber evidence="5">2.4.2.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">trpD</name>
        <name evidence="8" type="ORF">PPSC2_14570</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>diphosphate + N-(5-phospho-beta-D-ribosyl)anthranilate = 5-phospho-alpha-D-ribose 1-diphosphate + anthranilate</text>
            <dbReference type="Rhea" id="RHEA:11768"/>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <dbReference type="ChEBI" id="CHEBI:18277"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5">Binds 2 magnesium ions per monomer.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1 5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the anthranilate phosphoribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.18" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371668.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02220"/>
    <dbReference type="EnsemblBacteria" id="ADO57071">
        <property type="protein sequence ID" value="ADO57071"/>
        <property type="gene ID" value="PPSC2_14570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3109"/>
    <dbReference type="eggNOG" id="COG0547">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034315_2_1_9"/>
    <dbReference type="OMA" id="GPMTNPA"/>
    <dbReference type="OrthoDB" id="1238435at2"/>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004048">
        <property type="term" value="F:anthranilate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00211">
        <property type="entry name" value="TrpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005940">
        <property type="entry name" value="Anthranilate_Pribosyl_Tfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000312">
        <property type="entry name" value="Glycosyl_Trfase_fam3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017459">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036320">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035902">
        <property type="entry name" value="Nuc_phospho_transferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43285">
        <property type="entry name" value="PTHR43285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02885">
        <property type="entry name" value="Glycos_trans_3N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00591">
        <property type="entry name" value="Glycos_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47648">
        <property type="entry name" value="SSF47648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52418">
        <property type="entry name" value="SSF52418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01245">
        <property type="entry name" value="trpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="3 5 8" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="Glycos_trans_3N" evidence="7">
        <location>
            <begin position="12"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_3" evidence="6">
        <location>
            <begin position="81"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="5">
        <location>
            <begin position="90"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="5">
        <location>
            <begin position="97"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="5">
        <location>
            <begin position="115"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>anthranilate</name>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>anthranilate</name>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="232"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="348" mass="36776" checksum="F123CBA652B74F41" modified="2011-01-11" version="1">MERHDMMQVGLSRIIEGQHLSRTEARSVMEQIMSGSATQAQIGGLLTALRLKGETVDEITGFAEAMRNYASPVQAGEGNSRLLDTCGTGGSGIHKFNISTISAIIAASVSVRVAKHGNRSASGRAGSADVLEALGVNIHLTSDQARACLDRIGICFLFAQLYHPSMKHAAAPRRELGVRTVFNMLGPLTNPAGADRQLLGIYDASKTEVIAEVLNKLGSKRAMVVSSLDGLDEISISAATRVSELKDGKVHTFELHPSDLGLQTHSLDQVLGGDAQVNADIIRRILNGEHGAYRDVVLANAGACIYVSGATATLTDGVARAAEAIDSGLALSKLDQLIQATGEYQYVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E530</accession>
    <name>E3E530_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371828.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57238">
        <property type="protein sequence ID" value="ADO57238"/>
        <property type="gene ID" value="PPSC2_15345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3278"/>
    <dbReference type="eggNOG" id="ENOG50305VV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133817_2_0_9"/>
    <dbReference type="OMA" id="VEVLYVC"/>
    <dbReference type="OrthoDB" id="1971664at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15991" checksum="18E05CA6B19136DF" modified="2011-01-11" version="1">MTNKKVLDNKHKAPLPSEEDAGLIKMCVLLTLVLDVLERDIRIMNISPLKMPDLYIRSLTEVQQRITVQLAETKARMKRQGVKIYSEIRNHEGVEVLYVCRGYQRRFFMLSSFARSEVRRKLGYYLGIDLTQDYAPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E555</accession>
    <name>E3E555_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">XkdT3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xkdT3</name>
        <name evidence="2" type="ORF">PPSC2_16185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372001.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3458"/>
    <dbReference type="EnsemblBacteria" id="ADO57415">
        <property type="protein sequence ID" value="ADO57415"/>
        <property type="gene ID" value="PPSC2_16185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3456"/>
    <dbReference type="eggNOG" id="COG3299">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1021745_0_0_9"/>
    <dbReference type="OMA" id="ERWARNT"/>
    <dbReference type="OrthoDB" id="1212909at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006949">
        <property type="entry name" value="Baseplate_J-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04865">
        <property type="entry name" value="Baseplate_J"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Baseplate_J" evidence="1">
        <location>
            <begin position="102"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="30857" checksum="CD488F67C0053047" modified="2011-01-11" version="1">MNVKLTDLPALPPMAILEETPEEVYRRWVNRAITLAQEKGLPPPPTDPGEYFYDLWYPIAMEYSEQQELLTYAFLQGFPIWADGEFLDGHGWSDGMPRKVGEDDDTYRLRILDRAFTEEGSGRRKDYEAWAKELEGVGGAVAVEKARNDVSIDLYLIDLQGKPVTEEFAAKVKTDLWESKRIAGHDLAVHPAPVFTLQVAAKLNTVLPLTELIEPIRKRIADYALGRTKLFFNYVGAALLVKGVEDYENLTLNGTTKDVEVPVTSVLQIEVNLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E577</accession>
    <name>E3E577_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372023.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3481"/>
    <dbReference type="EnsemblBacteria" id="ADO57437">
        <property type="protein sequence ID" value="ADO57437"/>
        <property type="gene ID" value="PPSC2_16295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3479"/>
    <dbReference type="eggNOG" id="ENOG502ZR49">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106688_0_0_9"/>
    <dbReference type="OMA" id="AYTWRST"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168004" evidence="1">
        <location>
            <begin position="29"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="17738" checksum="A7BEFEC3B434D8F6" modified="2011-01-11" version="1">MKKKHLIASALALGIIGGAVAVPNAIFADSDAVSTSANTSTYGNHDEVKTPGNHDVGLFKTKDLFNVVLDGKSPLTEFSISPGYGHVKLRVKNNTKATLTFTLRHVNSGDYLLTKYVGAGEPFTWYSTDSFSNGMRAGDYEIQWRAGGAYVDATAWGISATSSDEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5E6</accession>
    <name>E3E5E6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Molybdenum transport system permease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cysT1</name>
        <name evidence="10" type="ORF">PPSC2_17345</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372246.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04685"/>
    <dbReference type="EnsemblBacteria" id="ADO57665">
        <property type="protein sequence ID" value="ADO57665"/>
        <property type="gene ID" value="PPSC2_17345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3706"/>
    <dbReference type="eggNOG" id="COG4149">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_14_3_9"/>
    <dbReference type="OMA" id="HWLAGAM"/>
    <dbReference type="OrthoDB" id="1915735at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015098">
        <property type="term" value="F:molybdate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011867">
        <property type="entry name" value="ModB_ABC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02141">
        <property type="entry name" value="modB_ABC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 8" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="44"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="89"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="144"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="198"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="10"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="24127" checksum="97905A87BACB0C8E" modified="2011-01-11" version="1">MDWSAFLPPVIVSVKVAVVASIIVFLLATVVARMMANCKLRRGISVIETVLLLPLVLPPTVVGFILLILLGRKSWIGTAFESLFQQTIVFTWGAAVVAAVVVAFPLAYRTIKAGFEAVEPEVEQAARAQGANEWQVFRHITMPLAYRPLISGYILGFARGLGEFGATLMLAGNIPEQTQTLPTAIYTASEVGNMTLSWSWVAVIILFSFIMLMLSNRLVKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F2</accession>
    <name>E3E5F2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">GTP 3',8-cyclase</fullName>
            <ecNumber evidence="3 12">4.1.99.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Molybdenum cofactor biosynthesis protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">moaA1</name>
        <name evidence="12" type="synonym">moaA</name>
        <name evidence="14" type="ORF">PPSC2_17375</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>AH2 + GTP + S-adenosyl-L-methionine = (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate + 5'-deoxyadenosine + A + H(+) + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:49576"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:131766"/>
            <dbReference type="EC" id="4.1.99.22"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12">Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Monomer and homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the radical SAM superfamily. MoaA family.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.22" evidence="3 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57671.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324579.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04715"/>
    <dbReference type="EnsemblBacteria" id="ADO57671">
        <property type="protein sequence ID" value="ADO57671"/>
        <property type="gene ID" value="PPSC2_17375"/>
    </dbReference>
    <dbReference type="GeneID" id="66576579"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3712"/>
    <dbReference type="eggNOG" id="COG2896">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_0_1_9"/>
    <dbReference type="OrthoDB" id="1199289at2"/>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019008">
        <property type="term" value="C:molybdopterin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061798">
        <property type="term" value="F:GTP 3',8'-cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904047">
        <property type="term" value="F:S-adenosyl-L-methionine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01225_B">
        <property type="entry name" value="MoaA_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="moaA"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0004">4Fe-4S</keyword>
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    <keyword evidence="5 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 12" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
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    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 12" id="KW-0949">S-adenosyl-L-methionine</keyword>
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        <location>
            <begin position="8"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
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        <location>
            <position position="24"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
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        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
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    </feature>
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            <position position="30"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
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        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
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        <location>
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        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
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        <location>
            <position position="102"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
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        </location>
        <ligand>
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        </ligand>
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        </location>
        <ligand>
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        </ligand>
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        </location>
        <ligand>
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    </feature>
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        <location>
            <position position="261"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-substrate</note>
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        </ligand>
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        <location>
            <begin position="266"/>
            <end position="268"/>
        </location>
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        </ligand>
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        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-substrate</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO57671.2"/>
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    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="337" mass="38518" checksum="79797441AD90F638" modified="2015-05-27" version="2">MANRSDDQWNRPLRDLRISVIDRCNFRCRYCMPEEIFGHDYPFLPKEKILTFAEITRLSRIFVSLGVTKLRITGGEPLLRKDLSSLIHSLTQLDGVEDIAMTTNGVFLPKYAASLREAGLKRVTVSLDSLDDDRFRRMNGGRSSVKAVLEGIEAAAQAGMQVKINMVVQKGFNDQDIVPMADYFQKKKHILRFVEFMDVGNTNGWKLDQVVSKQQIIETIHEHMPLEPVPPQYKGEVATRYRYLDRDGEIGIISSVTDAFCSTCTRARISAEGSLYTCLFASKGYKLRTMLRSEQSDDEIRSYIERVWRGRTDRYSEERLTHTKQASSKIEMSHIGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5I7</accession>
    <name>E3E5I7_PAEPS</name>
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        </submittedName>
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    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
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    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <location>
            <begin position="39"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57706.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="87" mass="10559" checksum="A631CE58F225C690" modified="2015-05-27" version="2">MKIRIEYRTSHIGYYRMIFNLDGTVEDDFFISEWTGLRLYQTRALLEDIKEEIEAERKNGEITEKEAIKLKEIIDEKKDMIRKEFSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5S3</accession>
    <name>E3E5S3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fliY5</name>
        <name evidence="8" type="ORF">PPSC2_18645</name>
    </gene>
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            <taxon>Bacteria</taxon>
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    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
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        <subcellularLocation>
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        <subcellularLocation>
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        </subcellularLocation>
    </comment>
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    </dbReference>
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        <property type="protein sequence ID" value="ADO57950"/>
        <property type="gene ID" value="PPSC2_18645"/>
    </dbReference>
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    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
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    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168843" evidence="6">
        <location>
            <begin position="28"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="7">
        <location>
            <begin position="61"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="30333" checksum="E20DC74699A44035" modified="2011-01-11" version="1">MRKFSFLPIVFIVMALLVSACGNNDKGAGTNNASTGENGSNNGKADTTAAATLESVKASGKLRIGTEGTYAPFTYHDAAGKLTGFDVDIATEVSKRLGVQPEFIETQWDGIFAGLNSKRFDAVFNEVSITDERKQKYDFSDPYIVSKAVLIVSEDNTDIQKFSDLKGKKAGQSLTSNLTQIAKSNGAEIVATEGFNQAIDLLTSKRVDATVNDGLSYLDLKKQKPDAPIKKVDESADASHSAAVFNKGSEDLIKAVNKALADMKADGTYLKISEKYFGADVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6C5</accession>
    <name>E3E6C5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transcriptional antiterminator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mtlR</name>
        <name evidence="7" type="ORF">PPSC2_18840</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372571.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06050"/>
    <dbReference type="EnsemblBacteria" id="ADO57994">
        <property type="protein sequence ID" value="ADO57994"/>
        <property type="gene ID" value="PPSC2_18840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4038"/>
    <dbReference type="eggNOG" id="COG1762">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3711">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013442_2_0_9"/>
    <dbReference type="OMA" id="YMTAREQ"/>
    <dbReference type="OrthoDB" id="1382729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011608">
        <property type="entry name" value="PRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036634">
        <property type="entry name" value="PRD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016152">
        <property type="entry name" value="PTrfase/Anion_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002178">
        <property type="entry name" value="PTS_EIIA_type-2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013011">
        <property type="entry name" value="PTS_EIIB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00874">
        <property type="entry name" value="PRD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00359">
        <property type="entry name" value="PTS_EIIA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
        <property type="entry name" value="SSF52794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55804">
        <property type="entry name" value="SSF55804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63520">
        <property type="entry name" value="SSF63520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51094">
        <property type="entry name" value="PTS_EIIA_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51099">
        <property type="entry name" value="PTS_EIIB_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PRD" evidence="6">
        <location>
            <begin position="306"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-2" evidence="5">
        <location>
            <begin position="414"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-2" evidence="4">
        <location>
            <begin position="533"/>
            <end position="676"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="692" mass="78944" checksum="2047A3C93A4E2F41" modified="2011-01-11" version="1">MNITKRQSDIVEYLLEQPQEVTAGEIAEKINVSTRTVHRELGAVECWLAAHEVKLEKKSGIGIYVDAGPTQLASLREQLLHTKSDEYSAEERKIVVLCMLLDTQEPIKLLALASDLKVTVTTVSHDLDELLGWIEDRGLMLVRRRGYGVEITGREIDKRRAISELALEYLDESDLFSGREELRPVTRVTEKLLEMIGRENLLTVENVLWQPHDQWLKNMVESKYMELLIQICVSLARLRLGYVVDHRLSYSKTDSEENIMLRTAMVERICAELSAALDIEFPEPERCYFGLLFRDAEDHSTRLLPLDDLVLLESVHELIRRVEAETGTPLAEDRVLREGLIAHMAPVFKRLREGRAIRNPLLQQIRKDYGSLFDSVKKAAADMTEMEVPDEEIGFLVMHFGASLERLRQLQREVRAIVVCTSGIGSSRLLATRLAKELPQIKIVDRASWYEATRIPKEDYDLIISTVELPLEPDRYLKISPLLTQEESDRLRHFIQHITLNQLSDHRQEQAVLSGQGMEWLTGLRKSLEEIVHIVQQFQVYPLENQGMDMPATIEAICMLEAGRGNVTEPSVVAEQLMERERQGSQVITDTSVALIHTRSPYIRQPLLTLYRLAEPLLADVDEQVECVLLMLGPRELPKESLEVLSEISALLLQEDMITLLEHGSRDQIANYISTELAEFFHSKLGTGRNLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G5</accession>
    <name>E3E6G5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">mcpB3</name>
        <name evidence="12" type="ORF">PPSC2_19025</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372610.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06235"/>
    <dbReference type="EnsemblBacteria" id="ADO58034">
        <property type="protein sequence ID" value="ADO58034"/>
        <property type="gene ID" value="PPSC2_19025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4077"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="FLAHPNK"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168194" evidence="9">
        <location>
            <begin position="35"/>
            <end position="657"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="280"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="300"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="10">
        <location>
            <begin position="371"/>
            <end position="628"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="657" mass="70599" checksum="9D0A87B6C032B7EF" modified="2011-01-11" version="1">MNLKMKLILLFTCIVIVAAGPLSVISMTSVKNQANHDIQELMNSKASETVNQLNGWTGGKAEIIETLAASLESSDISSDAKIASLKAAFQNYKDQNISNIYAGYEDGSYWDGSGWFEANYDPRARPWYKDAKTKGEMYYSSPYTDAGSNDFTISIAKPLKDANGSITGVVSEDIMLNDMTRMIQSINLNGLGYAFLIDQKGVVIAHPDNKLAGKNLKETPELGSSTATLLSAASGKTDYSYNGSDRQLYFKKMPSTGWIVGLSISKDIAFQEYYSTRNQLIITVAIILVVAMLLATWAANNFIKPIRRLQANVKRIAEGDMTARVDIKGKDEIASLGTDFNLMSDNLTHLLRKVSDTASDVSSASHDMHQHAKDTGTIASQISSAVQELAQGASDQAEAVYSGSEKLTHMTGSINQIGESVKRTQTAVFETDSAVLAGYETAERQAKLAAESRQTTTAAGEAVDSLTLKTQDIERLAGAIHDIAAQTNLLALNASIEAARAGEHGRGFAVVAGEVRKLAEQAGNSSDNIMSKLEEIKIAGVQSAEEMKKALAVTVEQEHAAIATRQAFESIRGASQHMLAQIEDVSAAADHLRVNAGHISDVISSVVAVSEQSAASTEEVASSVQEQGHAMNNIADLSAKLDSHADLLLEEVKRFKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6N9</accession>
    <name>E3E6N9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Succinate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">sdhA3</name>
        <name evidence="12" type="ORF">PPSC2_20320</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372871.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07575"/>
    <dbReference type="EnsemblBacteria" id="ADO58299">
        <property type="protein sequence ID" value="ADO58299"/>
        <property type="gene ID" value="PPSC2_20320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4332"/>
    <dbReference type="eggNOG" id="COG1053">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014312_7_1_9"/>
    <dbReference type="OMA" id="DPIPIQP"/>
    <dbReference type="OrthoDB" id="153138at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003952">
        <property type="entry name" value="FRD_SDH_FAD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037099">
        <property type="entry name" value="Fum_R/Succ_DH_flav-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015939">
        <property type="entry name" value="Fum_Rdtase/Succ_DH_flav-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030664">
        <property type="entry name" value="SdhA/FrdA/AprA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011280">
        <property type="entry name" value="Succ_DH/Fum_Rdt_flav_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027477">
        <property type="entry name" value="Succ_DH/fumarate_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11632">
        <property type="entry name" value="PTHR11632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11632:SF53">
        <property type="entry name" value="PTHR11632:SF53"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02910">
        <property type="entry name" value="Succ_DH_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46977">
        <property type="entry name" value="SSF46977"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56425">
        <property type="entry name" value="SSF56425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01811">
        <property type="entry name" value="sdhA_Bsu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00504">
        <property type="entry name" value="FRD_SDH_FAD_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="FAD_binding_2" evidence="10">
        <location>
            <begin position="6"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="domain" description="Succ_DH_flav_C" evidence="11">
        <location>
            <begin position="452"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="465"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="581" mass="64233" checksum="58E94B63AAA94C32" modified="2011-01-11" version="1">MAASNIIVVGGGLAGLMATIKAAEAGVHVHLFSLVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDSVYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTQHHRTAFAGATTGQQLLYALDEQVRRWESAGLVTKYENWEFLQAVLDDEGICRGICGQDLRTMEVKTFAADAVILASGGPGIIFGKTTNSVINTGTAAGAVYQQGVRYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFSVCVDDGLGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFVGDDPRKIPMKIFPAVHYSMGGMWVDYNQMTNIPGLFAAGECEFQYHGANRLGANSLLSAIYGGMVAGPKAVEYIKGLKKSAQDVASSVFDAAVNQQTEKYERILHMDGKENAYVLHKELGEWMTNNMTVVRYNDKLEATIHKIKELKERYSNININDASRWNNAGAAFTRQLWNMMELAEAMTKGALLRNESRGAHYKPDFPDRNDEDYLKTTIADWTPEGPQISYEEVDVSLIKPRVRDYSKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R6</accession>
    <name>E3E6R6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YdaS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydaS</name>
        <name evidence="2" type="ORF">PPSC2_21195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373037.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4519"/>
    <dbReference type="EnsemblBacteria" id="ADO58468">
        <property type="protein sequence ID" value="ADO58468"/>
        <property type="gene ID" value="PPSC2_21195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4505"/>
    <dbReference type="eggNOG" id="COG2261">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_160040_4_0_9"/>
    <dbReference type="OMA" id="HEMPGGI"/>
    <dbReference type="OrthoDB" id="2084822at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="8646" checksum="343E1B8848929113" modified="2011-01-11" version="1">MWGIVLSIVMAIIIGLIGDALAGHEMPGGIAGSMIAGFVGAWLGATILGDWGPVIGDFAVIPAILGTALFVFLLGLVSKLLRRAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6T7</accession>
    <name>E3E6T7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ybiT</name>
        <name evidence="5" type="ORF">PPSC2_21285</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373057.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08515"/>
    <dbReference type="EnsemblBacteria" id="ADO58489">
        <property type="protein sequence ID" value="ADO58489"/>
        <property type="gene ID" value="PPSC2_21285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4525"/>
    <dbReference type="eggNOG" id="COG0488">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_36_0_9"/>
    <dbReference type="OMA" id="CTHIADI"/>
    <dbReference type="OrthoDB" id="1112046at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="320"/>
            <end position="536"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="542" mass="61180" checksum="43077797B89E0C0D" modified="2011-01-11" version="1">MISTSGVTLRYGKRPLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEANSGEVHMTPGERMAVLKQNHYEYDEFPVLETVIMGHTRLYEIMKEKDALYAKAEFSEADGLRAGELEGEFAELNGWDAEPDAAALLIGLGIPRDLHDKKMAEMSGNDKVRVLLAQALFGRPNNLLLDEPTNHLDLESIQWLENFLMDYEGTVIVVSHDRHFLNKVCTHIADIDFGKIQMYVGNYDFWYESSQLALTLARDANKKKEEKIKELQAFIQRFSANASKSKQATSRKKQLDKITLDDIRPSNRKYPFINFKPEREAGKQLLTVDSVSKTVEGEQVLNEFSLVVNKGDKIAFVGPNGLPKTTLFQILMNELEADKGEFSWGITTSQAYFPKDNSTYFEGVDLNLVDWLRQYSKDQDETFLRGFLGRMLFSGEEALKKASVLSGGEKVRCMLAKMMLNGANVLLLEEPTNHLDLESITALNNGLIDFDGTILFTSHDHQFIQTIANRIVEITPNGVIDRTMSYDEYLENEEIAKLRERMYPVEIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6U5</accession>
    <name>E3E6U5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Iron-hydroxamate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fhuD11</name>
        <name evidence="3" type="ORF">PPSC2_21330</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373065.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08555"/>
    <dbReference type="EnsemblBacteria" id="ADO58497">
        <property type="protein sequence ID" value="ADO58497"/>
        <property type="gene ID" value="PPSC2_21330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4534"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_2_3_9"/>
    <dbReference type="OMA" id="DMDIIHA"/>
    <dbReference type="OrthoDB" id="1473468at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168207" evidence="1">
        <location>
            <begin position="27"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="2">
        <location>
            <begin position="65"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="34708" checksum="696F032C03FACA09" modified="2011-01-11" version="1">MKSYVLWSSAALLLAVTGCSNGTSTADHKPVSASVSTTSSTTSGATIQVTDFSKRTLAFQKVPQHIVALSNGDLDIIYALGGTAVGRPNSNGPSVVPAAENVQQIGSTHEVDLEKITMLKPDVVLGNYPMNEKDIPAIEGVGSQLLLTGANSVQDIQSQITLYGQLLQKQDGAVKLNQQIDQQVAKLQKETASTSKPKVLLVYGAPATYMAALPNSLGGNILEVAGGSNIAADFPGLQNFPQYAQLNTERIVQADPDYIFIMTHGNTEEVKAAFIKEMQENAAWNGIRAVQNSQVEVLPSDLFGTNPGTRVTKALDLMHQKLYPAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E781</accession>
    <name>E3E781_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ywbF</name>
        <name evidence="8" type="ORF">PPSC2_23445</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373472.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4997"/>
    <dbReference type="EnsemblBacteria" id="ADO58936">
        <property type="protein sequence ID" value="ADO58936"/>
        <property type="gene ID" value="PPSC2_23445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4963"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013133_6_1_9"/>
    <dbReference type="OrthoDB" id="791272at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024989">
        <property type="entry name" value="MFS_assoc_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12832">
        <property type="entry name" value="MFS_1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="77"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="162"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="269"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="299"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="336"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="364"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="domain" description="MFS_1_like" evidence="7">
        <location>
            <begin position="12"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF12832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="45613" checksum="B614808CFB685228" modified="2011-01-11" version="1">MQKREIQETPLYSLKLYNFFLYGAMVIFSSFFPLYLQDIGMDKLEIGSLMAIGPFVSVFANPFWGYTSDRSRNLRRILLFMIIGTLLLLQALFHVHTYVMIYVSMIGFYFFQSPLFAQSNTLILSYIEGTDRKFGSFRIWGSFGWAVTAAVAGIVVDHTGVSSISTIFTILLLAALICTLAIPPLKSTVETATIHLRGFGSILLNGYFISFILLGILVSIPNSINGAFMSLYITELGGSKLMLGFAVFMSSVFEIIVFLMFDRFLKKKMTVMVGCLALVSLLFALRWELMALATDPIQIVFIQALHCVTFGGYFYVGTQLTVLFTPAAYRSSGQAVYTLTWSGISGIVAGFAGGWLFQNFGGEMMYHAGVFFALLGSAGFAIMWYMLYKNGYQPGHGGEHKPIDEAPQRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7A3</accession>
    <name>E3E7A3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373494.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5019"/>
    <dbReference type="EnsemblBacteria" id="ADO58958">
        <property type="protein sequence ID" value="ADO58958"/>
        <property type="gene ID" value="PPSC2_23545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4985"/>
    <dbReference type="eggNOG" id="ENOG5034A5V">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1314415_0_0_9"/>
    <dbReference type="OMA" id="LAYGQYE"/>
    <dbReference type="OrthoDB" id="1270157at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="209" mass="24267" checksum="D725B4B1FFB510C5" modified="2011-01-11" version="1">MRVRIFIFILIIGIICVPAYFIMSSFGLFQNEKVLVHYKLALEVKGKKYDAWPLISSYTAIDKNGDHRQLYYQAEGSGIEYLFQLAYGQYELKPSKENPFLDGGIHYTMDHPEYVREEKQYENANDYTELTHYYNQQEQVIYTYNPEASLDKTYVRSIITAGMTRTTGNSSRPVKDDYINISKLFKDKLGVNVKVDVDEDNKIVTLSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E878</accession>
    <name>E3E878_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lysR3</name>
        <name evidence="3" type="ORF">PPSC2_15505</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371859.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03155"/>
    <dbReference type="EnsemblBacteria" id="ADO57270">
        <property type="protein sequence ID" value="ADO57270"/>
        <property type="gene ID" value="PPSC2_15505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3312"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="ITYDNAF"/>
    <dbReference type="OrthoDB" id="750230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="33847" checksum="98EB4DE9F110A1ED" modified="2011-01-11" version="1">MNFHQLHIFYTVAERGSFSAAAQALHMTQPAVTMQIQSLEDYFGTKLLRRSTKKIELSEAGATLLPFAKRSMQLIREADEAMSAFTHMLEGRLHIGASLTIGEYIVPRMLGPFGQEYPHIRMAMNVMNTTQIMDDILKHQLNLGLIEAPVQHPDIVVESVMQDELKLIVPSGHVLAKAKKVVLEDVFKHPFVAREKGSGTRQVIEDGLKNRGADASRLDIVMEMGSTGAVKSAVEAGLGITMLSPSSVKHEVALGLLKIVNISDITFKREFYAIHLKSALLPIPVVTFLSYLRRHDQGMDVFEDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E894</accession>
    <name>E3E894_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">30S ribosomal protein S4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 11" type="primary">rpsD</name>
        <name evidence="11" type="ORF">PPSC2_15585</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="6">With S5 and S12 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the universal ribosomal protein uS4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371873.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03235"/>
    <dbReference type="EnsemblBacteria" id="ADO57286">
        <property type="protein sequence ID" value="ADO57286"/>
        <property type="gene ID" value="PPSC2_15585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3328"/>
    <dbReference type="eggNOG" id="COG0522">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092403_0_1_9"/>
    <dbReference type="OMA" id="NVVFRMG"/>
    <dbReference type="OrthoDB" id="1211060at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01306_B">
        <property type="entry name" value="Ribosomal_S4_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022801">
        <property type="entry name" value="Ribosomal_S4/S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001912">
        <property type="entry name" value="Ribosomal_S4/S9_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005709">
        <property type="entry name" value="Ribosomal_S4_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018079">
        <property type="entry name" value="Ribosomal_S4_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831">
        <property type="entry name" value="PTHR11831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831:SF4">
        <property type="entry name" value="PTHR11831:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00163">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01390">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01017">
        <property type="entry name" value="rpsD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00632">
        <property type="entry name" value="RIBOSOMAL_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_S4" evidence="10">
        <location>
            <begin position="3"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="S4" evidence="9">
        <location>
            <begin position="91"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="22"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="199" mass="22730" checksum="3AE1373F74CBB1A0" modified="2011-01-11" version="1">MARYTGPKFKLSRRLGISLSGTGKELKRPFPPGQHGANQRRKISNYGMQLQEKQKLRHMYGLGEKQFRTLFNKAQHMHGIAGENFMFLLESRLDNLVFRLGFANSRAGARQLVAHGHVTVNGKKVDIASYQVSPGDVIGLRERSRSLSSIKEALENRNHLVAYLEYNDAALEGKYIRLPERAELSQDIDEKQIVEFYNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8H7</accession>
    <name>E3E8H7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lytR5</name>
        <name evidence="4" type="ORF">PPSC2_16715</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LytR/CpsA/Psr (LCP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372110.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04050"/>
    <dbReference type="EnsemblBacteria" id="ADO57526">
        <property type="protein sequence ID" value="ADO57526"/>
        <property type="gene ID" value="PPSC2_16715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3566"/>
    <dbReference type="eggNOG" id="COG1316">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016455_5_0_9"/>
    <dbReference type="OMA" id="WRHNSNG"/>
    <dbReference type="OrthoDB" id="491753at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004474">
        <property type="entry name" value="LytR_CpsA_psr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03816">
        <property type="entry name" value="LytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00350">
        <property type="entry name" value="lytR_cpsA_psr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LytR_cpsA_psr" evidence="3">
        <location>
            <begin position="101"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="353" mass="40212" checksum="AD6B697325F58343" modified="2011-01-11" version="1">MSNLSNGLPPRTQSGKKSAKPKKTKKKKSFFRSFMKFVLFLLIIGILAAGGYTYYIYNQVEEVLDTGINKEVPKTQLAEAKPLTILLLGTDYRPDHPTYLSDVIMVATLNPNTKSSTIVSLPRDTRLEMDGYKPRKLNEYYPVFKAREKESGEVAEEQMKKMIGKYLNINIDYVTVINFQGFRDVVDNLGGVDVTVDKNMCYRDRADGTDINLTAGAKHLNGDQALDFVRYRKSNCRPRTAESDDFDRNRRQNQVLHSLIDQMQTFNALTKFSAIIKSVDKNMMTDIESQQMKNIVQTYWNISKQNVKYNPVAGTWRSPYVYIDEQQLDLAKQALQEELAKKASDSTEASSNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L9</accession>
    <name>E3E8L9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aspartyl-tRNA amidotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372151.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04230"/>
    <dbReference type="EnsemblBacteria" id="ADO57568">
        <property type="protein sequence ID" value="ADO57568"/>
        <property type="gene ID" value="PPSC2_16895"/>
    </dbReference>
    <dbReference type="GeneID" id="66576665"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3607"/>
    <dbReference type="eggNOG" id="COG1610">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079430_2_1_9"/>
    <dbReference type="OMA" id="AMGAVMK"/>
    <dbReference type="OrthoDB" id="1498741at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016884">
        <property type="term" value="F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023168">
        <property type="entry name" value="GatB_Yqey_C_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019004">
        <property type="entry name" value="YqeY/Aim41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042184">
        <property type="entry name" value="YqeY/Aim41_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28055">
        <property type="entry name" value="PTHR28055"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09424">
        <property type="entry name" value="YqeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="16790" checksum="9E23DB4E218E8785" modified="2011-01-11" version="1">MNLSERLNEDMKQAMKSKDKFKLSTIRMVRSTIKNLEIDLKRNLDDNEVLDILSREIKQRKDALHEFEKAGRDELATSTKAEIEIIAQYLPEQLSEEEIKVIVQQTIQETGASSKAEMGKVMTALMPKVKGRADGKLVNQAVQQFLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8N5</accession>
    <name>E3E8N5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372324.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3790"/>
    <dbReference type="EnsemblBacteria" id="ADO57744">
        <property type="protein sequence ID" value="ADO57744"/>
        <property type="gene ID" value="PPSC2_17720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3788"/>
    <dbReference type="eggNOG" id="ENOG503383Y">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087210_0_0_9"/>
    <dbReference type="OMA" id="YETIFEC"/>
    <dbReference type="OrthoDB" id="1755842at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="209" mass="25011" checksum="D0ED8FE74A737361" modified="2011-01-11" version="1">MPTYFSIQYSFPYDYFSANFTQEIYETIFECFSFKSGYWNSEDNNLEEIISWNSKLLSDKFKLEFDQHVRHNYKQVLLQSNQFSHLRLFWTYQSNEIILHLILPEDEVELDDDSWKFNGEQIAPLLNLSVKIWEKHRLNMVQTYRELGAPVSLREVLKGKLTSTDPFSIMGFELFEKHENLESDYKTIVIKNGLLIIEQEYVSLFNEVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8R2</accession>
    <name>E3E8R2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Alpha-L-rhamnosidase</fullName>
            <ecNumber evidence="2">3.2.1.40</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ramA</name>
        <name evidence="8" type="ORF">PPSC2_17850</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides.</text>
            <dbReference type="EC" id="3.2.1.40"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.2.1.40" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372351.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05195"/>
    <dbReference type="CAZy" id="GH78">
        <property type="family name" value="Glycoside Hydrolase Family 78"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57771">
        <property type="protein sequence ID" value="ADO57771"/>
        <property type="gene ID" value="PPSC2_17850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3814"/>
    <dbReference type="eggNOG" id="COG3408">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002926_1_1_9"/>
    <dbReference type="OMA" id="AIGDWMY"/>
    <dbReference type="OrthoDB" id="170130at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030596">
        <property type="term" value="F:alpha-L-rhamnosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016007">
        <property type="entry name" value="Alpha_rhamnosid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035396">
        <property type="entry name" value="Bac_rhamnosid6H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035398">
        <property type="entry name" value="Bac_rhamnosid_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013737">
        <property type="entry name" value="Bac_rhamnosid_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008902">
        <property type="entry name" value="Rhamnosid_concanavalin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05592">
        <property type="entry name" value="Bac_rhamnosid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17389">
        <property type="entry name" value="Bac_rhamnosid6H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17390">
        <property type="entry name" value="Bac_rhamnosid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08531">
        <property type="entry name" value="Bac_rhamnosid_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF010631">
        <property type="entry name" value="A-rhamnsds"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_rhamnosid_N" evidence="5">
        <location>
            <begin position="151"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_rhamnosid" evidence="4">
        <location>
            <begin position="327"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_rhamnosid6H" evidence="6">
        <location>
            <begin position="433"/>
            <end position="781"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_rhamnosid_C" evidence="7">
        <location>
            <begin position="783"/>
            <end position="852"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012652"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF17389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF17390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="916" mass="104330" checksum="2627AE68D5B48C9A" modified="2011-01-11" version="1">MLKVKALRCEHVNNPIGLGCLKPRLSWQIESDNIYVFQKRFQLQVSINPVFEPLLWNHFSYSEQSILFPYEGPPLESGQRYYYRVKVWAQGAGDTEPEESEWSEIGFWEMGLLHEQDWKAQWITVKERSIHEKFQTRAPFAASKCFLVEGKVKKAVIYATSLGLYELELNGQRVGDAYFTPGWTDYNDRVQVQAYDVTSTVREQHNRITATVGEGWYSGYLGWQKRKDTYGNTNALLFQMKISYEDGRSELICSDSSWEETSCAILMSDIYNGEIYDARLEQQAAEHRFLNERKMMQVVPFPLSHLVAQENEPVRVMNRLKPVELIRTPKGELVLNLGQNMVGWLEFKVEAPEGTVLNLVHGEVLDQQGNFYRDNMRDAAQQITYICSGKGTEIFRPHFTFQGFQYVKLEGFPAGVAIEDFTGVVLHSDMATIGLFETSDPKLNQLQHNIVWGQKGNFLDVPTDCPQRDERLGWTGDAQIFARTASFNMNSASFFRKWLKDLAYNQLENGAVPFVVPDVLKGTFADNMDQTTAAWGDAAVICPWTIYQCYGDKQILAQQYDSMKAWVDYIRAQGTEEHLWDTGLQLGDWLALDSEEGSYFGATDGTLVATAYFAYSTHILAQTAKLLNRYTDYNTYQSLHEGIRSAFANRYFDDAGKLTSNTQTAQVVALHFGLVPEKYKKQVVQELVRLIEKNDMHLDTGFVGTPYLCLVLSDNGYTDIAYKILFQKDYPSWLYQVERGATTMWEHWDSIKVDGSFWSTDMNSFNHYSYGSVGDFMYQNIAGIDVLEAGYKKSRLAPKPPVNLTSAHGKLETPYGEVAVHWEIVNEEMRMTVHVPHNTTAEITLPGVLEPEALQQTITTQYPSIQYPPGNVPQELAGKSGSPGEQAIFQLSGDHELTFTVGSGQYTFQYKYNQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E929</accession>
    <name>E3E929_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydeE7</name>
        <name evidence="3" type="ORF">PPSC2_24800</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373769.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5299"/>
    <dbReference type="EnsemblBacteria" id="ADO59236">
        <property type="protein sequence ID" value="ADO59236"/>
        <property type="gene ID" value="PPSC2_24800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5257"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3708">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_81_1_9"/>
    <dbReference type="OMA" id="YAVLRHK"/>
    <dbReference type="OrthoDB" id="1748122at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010499">
        <property type="entry name" value="AraC_E-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029442">
        <property type="entry name" value="GyrI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06445">
        <property type="entry name" value="GyrI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00871">
        <property type="entry name" value="AraC_E_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="10"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="32791" checksum="2C7D5DAE36E42314" modified="2011-01-11" version="1">MWLEWLLRIKNALDLMEERMQQPLDIDEIAKAAYSSPFHFQRMFYMLTGVTVAEYVRKRRLTLAAQELSLSTTKVLDVAFKYGYDSPESFSKAFRKVHGISPSEARNPGVNLKAFPRITFHLSLKGDQEMDYKIVEKAAFTVIGKSIQVTTKNGENLREIPKFWDQLNADGTSDRIHALGTGDDILGICLDMKHGEETFSYLIAAEGSEDVAASNGLEARTIPAATWAVFTSIGPMPHSIQKVWQRIYQEWFPASNYEHSGGPELEVYTMGDTHAEEYRSEVWIPITKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E992</accession>
    <name>E3E992_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_15945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371951.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57365">
        <property type="protein sequence ID" value="ADO57365"/>
        <property type="gene ID" value="PPSC2_15945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3406"/>
    <dbReference type="HOGENOM" id="CLU_2357107_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168082" evidence="1">
        <location>
            <begin position="31"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="11044" checksum="F9462DC7147CD108" modified="2011-01-11" version="1">MKRIAKYFSAILSVILLFNIFGLTATSASAEEITHQSEEVTEEYDRQLDKVYEEYKENQSGIQSEFSQNHITPFAAQPASIGHIIKFTIQQLFKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9B3</accession>
    <name>E3E9B3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_16040</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0324 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371972.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03730"/>
    <dbReference type="EnsemblBacteria" id="ADO57386">
        <property type="protein sequence ID" value="ADO57386"/>
        <property type="gene ID" value="PPSC2_16040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3428"/>
    <dbReference type="eggNOG" id="COG2855">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033541_0_1_9"/>
    <dbReference type="OMA" id="FGLWCAI"/>
    <dbReference type="OrthoDB" id="1856009at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018383">
        <property type="entry name" value="UPF0324_pro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30106">
        <property type="entry name" value="PTHR30106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03601">
        <property type="entry name" value="Cons_hypoth698"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="43"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="219"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="261"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="294"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="319"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="341" mass="37160" checksum="DB1EA8F1275E8982" modified="2011-01-11" version="1">MKSHIQHVKFLLNRGRLFQFLFGIVLTMIFALAGYVLNEVPGFHYVGPLACAMFLAILYRQLWGYPEAVRSGIEFSAKKILRGAIVLYGLKLNMDVVIHHGLGLLLRDVGTVVFAIFFTVWLAKRFKADASLSLLLGIGTGVCGAAAIAAVSPLLKSDDEDTAIGVGLIALVGTVFAILFTVLRPWLPLTDIQYGIWSGISLHEIAHVALAAAPAGQDALAMGLLAKLGRVFLLIPLSFILMYWMKRTGKIRTGTKVEFPWFLMGFIAASILGSYVFGKYIVVSPSLMNELSQLTTFMLTMAMVGMGLNVSFKTLREKAMLPLLVLSVTSIILVGLTFVTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9V5</accession>
    <name>E3E9V5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ribosomal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ysxB</name>
        <name evidence="1" type="ORF">PPSC2_19355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372662.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06555"/>
    <dbReference type="EnsemblBacteria" id="ADO58088">
        <property type="protein sequence ID" value="ADO58088"/>
        <property type="gene ID" value="PPSC2_19355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4130"/>
    <dbReference type="eggNOG" id="COG2868">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_140910_1_1_9"/>
    <dbReference type="OMA" id="SFEMTGH"/>
    <dbReference type="OrthoDB" id="2065603at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16332">
        <property type="entry name" value="Prp-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1490">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007422">
        <property type="entry name" value="Peptidase_Prp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036764">
        <property type="entry name" value="Peptidase_Prp_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39178">
        <property type="entry name" value="PTHR39178"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04327">
        <property type="entry name" value="Peptidase_Prp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118010">
        <property type="entry name" value="SSF118010"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12326" checksum="1D2A4ED77CC1B06C" modified="2011-01-11" version="1">MIIVRIIRLEDGSIQGFSVKGHANFAKSGEDIVCAGVSAVTVGTVNSIVALTDVEMETEMENGFLSAYLSPENYHDANAQVQLLLESMVIMLTSIAESYGKYIQIENKQRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA40</accession>
    <name>E3EA40_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvbU</name>
        <name evidence="3" type="ORF">PPSC2_20460</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372903.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07715"/>
    <dbReference type="EnsemblBacteria" id="ADO58332">
        <property type="protein sequence ID" value="ADO58332"/>
        <property type="gene ID" value="PPSC2_20460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4364"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="EQCIAGV"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="32743" checksum="0A077CF64C9C9ABF" modified="2011-01-11" version="1">MTITQIMIFVRVAETLNFTQTAHELHMTQPAVSHAIASIENELDVQLLLRDRKRGVLLTEIGQKVLLQFRMVLQSMEKVQQQVAAEKGLDVGTITIGAFPSASAYFLPPIIHHIRQHYPNLVFDLHEGSTNEVKEWVHTREIEAGIILLPDPEVDVIPLCQDDMIILLPDGHPFQSHDKIAIRDLNQQEMIFCKGGHEVAIMEGFEREQSQLQAQFITHNISTLVSMVRQGLGMGIVSSLALSTFPHDLTVKETTPLITRQIGIAIPSLHNASLAVQLFVRTAQELFTDLKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA50</accession>
    <name>E3EA50_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Metal ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yaeE</name>
        <name evidence="7" type="ORF">PPSC2_20510</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013311839.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07765"/>
    <dbReference type="EnsemblBacteria" id="ADO58342">
        <property type="protein sequence ID" value="ADO58342"/>
        <property type="gene ID" value="PPSC2_20510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4374"/>
    <dbReference type="eggNOG" id="COG2011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077375_0_1_9"/>
    <dbReference type="OMA" id="RYQTEVM"/>
    <dbReference type="OrthoDB" id="1464674at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="93"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="192"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="18"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="23818" checksum="2E2706F74F7EC7BE" modified="2011-01-11" version="1">MSELDFSQVSWEELGNSTLETLQMLGASALFTLVIGLPLGILLFLASRSSLTLMKVIYIVLSFIVNILRSVPFIILIVALIPFTRSLVGTSTGVLGTIPPLVIGAAPFFARLVETSLREVDKGVIEAAQAMGASTGQIIRRVLLREALPGLLAALTITVVTLVSYTAMSGMIGGGGLGTLAINYGYYRYETAVMIVAVVLMVVLVQLLQMAGDRLVRHYTRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAK1</accession>
    <name>E3EAK1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP-dependent DNA helicase</fullName>
            <ecNumber evidence="6">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pcrA3</name>
        <name evidence="10" type="ORF">PPSC2_22630</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the helicase family. UvrD subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373298.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10105"/>
    <dbReference type="EnsemblBacteria" id="ADO58759">
        <property type="protein sequence ID" value="ADO58759"/>
        <property type="gene ID" value="PPSC2_22630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4793"/>
    <dbReference type="eggNOG" id="COG0210">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004585_5_2_9"/>
    <dbReference type="OMA" id="YQDTNRT"/>
    <dbReference type="OrthoDB" id="137860at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006268">
        <property type="term" value="P:DNA unwinding involved in DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005751">
        <property type="entry name" value="ATP-dep_DNA_helicase_PcrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013986">
        <property type="entry name" value="DExx_box_DNA_helicase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014017">
        <property type="entry name" value="DNA_helicase_UvrD-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000212">
        <property type="entry name" value="DNA_helicase_UvrD/REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014016">
        <property type="entry name" value="UvrD-like_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11070">
        <property type="entry name" value="PTHR11070"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00580">
        <property type="entry name" value="UvrD-helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13361">
        <property type="entry name" value="UvrD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01073">
        <property type="entry name" value="pcrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51198">
        <property type="entry name" value="UVRD_HELICASE_ATP_BIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51217">
        <property type="entry name" value="UVRD_HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 6 10" id="KW-0347">Helicase</keyword>
    <keyword evidence="5 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD-like helicase ATP-binding" evidence="8">
        <location>
            <begin position="11"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="UvrD-like helicase C-terminal" evidence="9">
        <location>
            <begin position="291"/>
            <end position="568"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="660"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="676"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="32"/>
            <end position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="774" mass="86976" checksum="F435FFE4E02EDD3D" modified="2011-01-11" version="1">MQSIDIHEAVARLNQPQRQAVEAVDGPLLIMAGAGSGKTRVLTHRIAYLIATRKTAPWGILAITFTNKAAREMQDRVSKLIGPQGRDVWVSTFHSMCVRILRRDIERIGFTSNFSILDSTDQLSVIRSCMKDLNIDTKKFEPKAVQSMMSTAKNELVTPEMYERKIGDYFEGIVAKVYTKYQQRLKNNNSLDFDDLIMATIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLCKMLADKHHRLCVVGDSDQSIYRWRGADISNILNFEEDYPEARTILLEQNYRSTSNILNAANEVIGQNTGRKPKKLWTDKEGGAKIKVYRADSEHDEGYFIASEIHKNIKAGKTYSHHAILYRTNAQSRVVEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLIRIINVPKRSIGDTTVGKLQAAAAERGVSIFRVLQVVDDLGFAGRTRNALVEFYDMIEGLSRMVDYLSVTELTEKMLETTQYRLELQNENTLESRSRLENIDEFLSVTMEFEKGTEDKSLVSFLTDLALIADIDSMNDDEEEQSDAVVLMTMHSAKGLEFPIVFIVGMEEGVFPHSRAFLDNEELEEERRLAYVGITRAEEQLFLTCAQMRTLFGRTTANPPSRFLEEIPDELKEDTIIKRDRYRRSGNVGGSYGGRGLGKSSGSNFGGERSFDTMSRSGSSASASPRVTVTTSSPAKPTSTASTGGPSIFAAGDKVQHGKWGIGTIVAVKGTGNDMELQIAFPAPVGVKRLLAGFAPITKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAR0</accession>
    <name>E3EAR0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_22895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373356.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4877"/>
    <dbReference type="EnsemblBacteria" id="ADO58818">
        <property type="protein sequence ID" value="ADO58818"/>
        <property type="gene ID" value="PPSC2_22895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4848"/>
    <dbReference type="eggNOG" id="ENOG503060V">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2539433_0_0_9"/>
    <dbReference type="OMA" id="WIGYHAS"/>
    <dbReference type="OrthoDB" id="2033371at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="9796" checksum="684EE9F240B4ABB3" modified="2011-01-11" version="1">MRTKRTTRQLKSAWIGYRASDADGLVSSLHEERIQAERLLREERELFHAALERKKQRDTELKQLLADALAEERRWIERAGIHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAR6</accession>
    <name>E3EAR6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cobyrinate a,c-diamide synthase</fullName>
            <ecNumber evidence="3">6.3.5.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Cobyrinic acid a,c-diamide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">cbiA</name>
        <name evidence="6" type="ORF">PPSC2_23650</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>2 ATP + cob(II)yrinate + 2 H2O + 2 L-glutamine = 2 ADP + cob(II)yrinate a,c diamide + 2 H(+) + 2 L-glutamate + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:26289"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58537"/>
            <dbReference type="ChEBI" id="CHEBI:58894"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; adenosylcobalamin biosynthesis; cob(II)yrinate a,c-diamide from sirohydrochlorin (anaerobic route): step 10/10.</text>
    </comment>
    <comment type="domain">
        <text evidence="3">Comprises of two domains. The C-terminal domain contains the binding site for glutamine and catalyzes the hydrolysis of this substrate to glutamate and ammonia. The N-terminal domain is anticipated to bind ATP and cobyrinate and catalyzes the ultimate synthesis of the diamide product. The ammonia produced via the glutaminase domain is probably translocated to the adjacent domain via a molecular tunnel, where it reacts with an activated intermediate.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="3">The a and c carboxylates of cobyrinate are activated for nucleophilic attack via formation of a phosphorylated intermediate by ATP. CbiA catalyzes first the amidation of the c-carboxylate, and then that of the a-carboxylate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CobB/CbiA family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.11" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373516.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11155"/>
    <dbReference type="EnsemblBacteria" id="ADO58980">
        <property type="protein sequence ID" value="ADO58980"/>
        <property type="gene ID" value="PPSC2_23650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5006"/>
    <dbReference type="eggNOG" id="COG1797">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022752_2_0_9"/>
    <dbReference type="OMA" id="QPFKCGP"/>
    <dbReference type="OrthoDB" id="692368at2"/>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00231"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042242">
        <property type="term" value="F:cobyrinic acid a,c-diamide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00027">
        <property type="entry name" value="CobB_CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004484">
        <property type="entry name" value="CbiA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011698">
        <property type="entry name" value="GATase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43873">
        <property type="entry name" value="PTHR43873"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07685">
        <property type="entry name" value="GATase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00379">
        <property type="entry name" value="cobB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="2 3" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="4">
        <location>
            <begin position="22"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="GATase_3" evidence="5">
        <location>
            <begin position="277"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="359"/>
        </location>
    </feature>
    <feature type="site" description="Increases nucleophilicity of active site Cys" evidence="3">
        <location>
            <position position="463"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="484" mass="52369" checksum="295D72D75AD4FDEC" modified="2011-01-11" version="1">MADGMKQAVQPDLSAVARRSRIVVAGTGSGAGKTTVTLGLMKAFADSGLRVQGFKCGPDYIDPTYHTAATGTPSRNLDSWMTSPDMVRETFIRASEGADLCVIEGVMGLYDGKDPLSNIGSTAEIAMLTDSPVLLVVDVRSMARSAAAIVLGFQRLEPKLRIVGVIVNRCGSQGHYGIVKKAIEQECGIPVLGWLKRDDGLDIPERHLGLVPAVERGELEPLFQRAAELIRAGTDLDALRALADSAPPLRLPEHPLFPPDRLPTAGHEAETGERPVIAVARDAAFNFYYPENMDLLRHAGAEIVYFSPLAGERVPEHANGLYLGGGFPEEFAADIAANTGFLQDIRNAVSQDMPVFAECGGYMVLARTLTDRAGHAHHMAGVIPSDVRMQEKRAALGYREATALQDCLLLEAGETIRGHEFHYSVMSYDESAAPYPFAYQTKGMRGLQSEGYAKGNLLAAYTHIHLASLPKAAVRWVEKCRAYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT9</accession>
    <name>E3EAT9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yfiD3</name>
        <name evidence="6" type="ORF">PPSC2_23760</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373539.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5064"/>
    <dbReference type="EnsemblBacteria" id="ADO59003">
        <property type="protein sequence ID" value="ADO59003"/>
        <property type="gene ID" value="PPSC2_23760"/>
    </dbReference>
    <dbReference type="GeneID" id="66575320"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5028"/>
    <dbReference type="eggNOG" id="COG2259">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058421_3_2_9"/>
    <dbReference type="OMA" id="KKGQPFG"/>
    <dbReference type="OrthoDB" id="2025630at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032808">
        <property type="entry name" value="DoxX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07681">
        <property type="entry name" value="DoxX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="14183" checksum="7C01F7C47BA77A1E" modified="2011-01-11" version="1">MNQTLANIGLLLVRIFTGVIFIVHGAQKFQGLDGTSGFFQSLGLPGWMAPVVATVELVGGIALVLGIGTRLAGAALTIVMIGVLLTAKKGQPFGSIEFDLLILFTSLQQALVGGRFLAVDQLFGRKKAENSNVQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAU5</accession>
    <name>E3EAU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yndE13</name>
        <name evidence="7" type="ORF">PPSC2_23790</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59009.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886064.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11295"/>
    <dbReference type="EnsemblBacteria" id="ADO59009">
        <property type="protein sequence ID" value="ADO59009"/>
        <property type="gene ID" value="PPSC2_23790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5034"/>
    <dbReference type="eggNOG" id="COG1457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047547_1_1_9"/>
    <dbReference type="OrthoDB" id="842200at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="79"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="142"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="217"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="270"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="303"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="335"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59009.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="360" mass="40120" checksum="513A5D907024BD0A" modified="2015-05-27" version="2">MKKKVQIGAKEMISLMVLFEMGTSMMSIPGRNAGKDAWIAILISTVLGAMLFVCYGSLHRRFPNLLMTQYCRTLLGKKAGSTLAFLYIVFFLYGGARDLRDTGILIADRTLQHTPLTVICGLMVVLVMYVVYLGIEVAGRTAIIMLILLLLLGLATNILILLAGIVDMGNILPIAEHGWQPIWQVVYSQAVMLPYGEMVTFAMILPTLKKEYRANGIGISAILLGGLLLSIITLSNVLALGEDVFKRATYPLLTMISKVEISDFIDRVDVIGVMSVIIFDFFKILIFYYAAVKAAEDVLRIPYHKLILPFGLIMLVSCVLMALNYQDHLQTGELVLKWLFPIFAVFFPILLLIVSWLRKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAW7</accession>
    <name>E3EAW7_PAEPS</name>
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        <submittedName>
            <fullName evidence="6">Spermidine/putrescine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="6" type="primary">potA11</name>
        <name evidence="6" type="ORF">PPSC2_23890</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11395"/>
    <dbReference type="EnsemblBacteria" id="ADO59031">
        <property type="protein sequence ID" value="ADO59031"/>
        <property type="gene ID" value="PPSC2_23890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5055"/>
    <dbReference type="eggNOG" id="COG3842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_1_9"/>
    <dbReference type="OMA" id="VYVSHDQ"/>
    <dbReference type="OrthoDB" id="1200451at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_1"/>
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    </dbReference>
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    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="352" mass="39628" checksum="F04CD77B60A656C5" modified="2011-01-11" version="1">MALLTLDRVSVAYDNQLILQDFDLQLERGQLLSLLGPSGCGKTTTLRLIAGFLEAKQGTFLFGDKDYTRVPVNKRNFGFVFQSYALFPHLSVFDNVAFGLRLRKVKEDDVKRRVMTMLDTVSLGGFEKRFPGELSGGQRQRVAIARALVIEPDLLLFDEPLSNLDANLRVNMRVEIRRIQQELGIATVYVSHDQEECFSISDQVAIMNKGNIEQLDAPSTIFKYPTTEFVARFIGFNNFLSFDERTEEGERIRLNTSDLSFSVVRNQGTVQPGARQGAIRPDDLVIRTEGNETGENELSGVIKVSTYLGRSYQYVVETAKGNFTANQEMDTPYLSGQRVTLHFPADKMVLVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAZ1</accession>
    <name>E3EAZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Fe-S oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_24960</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12455"/>
    <dbReference type="EnsemblBacteria" id="ADO59271">
        <property type="protein sequence ID" value="ADO59271"/>
        <property type="gene ID" value="PPSC2_24960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5289"/>
    <dbReference type="eggNOG" id="COG0535">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_865566_0_0_9"/>
    <dbReference type="OMA" id="DILICEL"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="5">
        <location>
            <begin position="12"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="321" mass="36412" checksum="A955692E7B1D1C2E" modified="2011-01-11" version="1">MSIENKYKALELEKPGIYELEGLEVGVTSNCNFKCDYCCAYQRNDGQCISSKEVIGIIDDIPTLKRVRLSGGEVTLKYDDCLDIVAHCSSKGIATQLNTNASLLSPERIEKLRDAGLSNIHISFNFTDADKYAAYYHVHPRMYEKIIQNIRLCTEAKLETVLETLLFEETQNNMPAISEKVYELGVRIHEIQNSIVMDHTNWNAISTKEALVRSVHDLIAHKKDDTVLYFTCMDRFAEALGFKEQPRVYFSNCVDGKKQLHLHGNGDILICELCHPVVIGNIYNGTSLKDIYKNKPKQLQEFLDKLPCPAYDALFPEGSME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB34</accession>
    <name>E3EB34_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_25150</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373847.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5377"/>
    <dbReference type="EnsemblBacteria" id="ADO59314">
        <property type="protein sequence ID" value="ADO59314"/>
        <property type="gene ID" value="PPSC2_25150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5330"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_28_0_9"/>
    <dbReference type="OMA" id="MAVQATN"/>
    <dbReference type="OrthoDB" id="1204683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="192" mass="22182" checksum="AF6CCCBB81AB8A22" modified="2011-01-11" version="1">MARSKEFEENVVLEKAMKLFWEQGYEKTSMNDLVEHMGIHRRSIYDTFTDKHTLFLKVMDRFGERINGRWAAGIKQSRTAKQALQFIFDSIINGEEDVPPGCMFVNSAVELAIRDEDIDEIATKAFAKSEKMLAEIVTWGQQNGEFTQQYEVKELAEYLQNALAGLRVMVRTSVPKEKLQRIAELNLRILET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB38</accession>
    <name>E3EB38_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59318.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5382"/>
    <dbReference type="EnsemblBacteria" id="ADO59318">
        <property type="protein sequence ID" value="ADO59318"/>
        <property type="gene ID" value="PPSC2_25170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5335"/>
    <dbReference type="HOGENOM" id="CLU_2618741_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59318.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="9632" checksum="DDBE63255B687685" modified="2015-05-27" version="2">MRSPEWLDFVIWYHTEQDYGKNKGLHGYEGYIQFLEHRRELELRIIEQLPFQCFILDNSDYDWGNQQQIVSNIMMKYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB76</accession>
    <name>E3EB76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Macrolide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">metN7</name>
        <name evidence="5" type="ORF">PPSC2_20820</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372977.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08065"/>
    <dbReference type="EnsemblBacteria" id="ADO58408">
        <property type="protein sequence ID" value="ADO58408"/>
        <property type="gene ID" value="PPSC2_20820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4440"/>
    <dbReference type="eggNOG" id="COG1136">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="ALINCPK"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="11"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="47"/>
            <end position="54"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="27551" checksum="5ABF1E52018D36AE" modified="2011-01-11" version="1">MSETQFNNTVIEIKELKKRYEVGGQEIQALRSVNLSINEGEFVAIMGPSGSGKSTMMNVIGCLDHPDTGKYYLDGYSILDARENELSEIRNQKLGFVFQKFYLLPRTTALANVELPMMYAGVPAKERRERAIEALRMVGLAERMYNKPNELSGGQQQRVSIARALVNHPVILLADEPTGALDTKTSIEIMELFQGLNEQGKTIVLVTHELEIAEYAKRLISFRDGNIERDEPIANRRISSRMVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBE4</accession>
    <name>E3EBE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">GTP cyclohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ribA3</name>
        <name evidence="8" type="ORF">PPSC2_21900</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; riboflavin biosynthesis.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373185.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09045"/>
    <dbReference type="EnsemblBacteria" id="ADO58618">
        <property type="protein sequence ID" value="ADO58618"/>
        <property type="gene ID" value="PPSC2_21900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4659"/>
    <dbReference type="eggNOG" id="COG0807">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020273_2_1_9"/>
    <dbReference type="OMA" id="GQGFILY"/>
    <dbReference type="OrthoDB" id="900513at2"/>
    <dbReference type="UniPathway" id="UPA00275"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003935">
        <property type="term" value="F:GTP cyclohydrolase II activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00641">
        <property type="entry name" value="GTP_cyclohydro2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032677">
        <property type="entry name" value="GTP_cyclohydro_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000926">
        <property type="entry name" value="RibA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036144">
        <property type="entry name" value="RibA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00925">
        <property type="entry name" value="GTP_cyclohydro2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142695">
        <property type="entry name" value="SSF142695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0686">Riboflavin biosynthesis</keyword>
    <feature type="domain" description="GTP_cyclohydro2" evidence="7">
        <location>
            <begin position="78"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="28632" checksum="E35C1E5EF16C354D" modified="2011-01-11" version="1">MNQKDVATLLNDKIQTIRGKQSSTILVGPIKLPVNLEGETIVFQWYCWLPVRDEEDRQDLLNANAETIVKRLSTLNLAEGQQSSVLVYGDLEQSDNALVRMHSICHTGDIFGSKRCDCGFQLHQSMKMIVEHGTGALFYLANHEGRGIGLFSKAMAYILQEEGMDTVEANHQLGFEDDTRNYADAISVLQHLRQKPVTLITNNPKKLDALKKSGMNVAGRMPLWGDVSQYNERYLNTKVERSGHLRDSDLREVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM2</accession>
    <name>E3EBM2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD-dependent dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">galE7</name>
        <name evidence="2" type="ORF">PPSC2_22995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373378.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4900"/>
    <dbReference type="EnsemblBacteria" id="ADO58840">
        <property type="protein sequence ID" value="ADO58840"/>
        <property type="gene ID" value="PPSC2_22995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4869"/>
    <dbReference type="eggNOG" id="COG0451">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_1_7_9"/>
    <dbReference type="OMA" id="WIGKYVV"/>
    <dbReference type="OrthoDB" id="1180629at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="34101" checksum="501C5AB8B9813999" modified="2011-01-11" version="1">MKKKIIVTGANGFIGSHVIDELGITGDEVYAITSKVDLKINTSNVTWVKANLHDDNQIDEIFSIVTSPTHLLHLAWDTTPGHYQNSSSNFKWVSASLSLFDRFRVAGGKRIVGVGSCFEYDSSQEGCKESDTPLNYNTIYGSSKNSLYQMLMTYSQHFGISSAWARIFYLYGPREHRLRLVPSVILSLLDGEKAKCSHGLQIRDYLYVKDVARAVVKLLDSEVSGPVNIGSGTPIRLSEIIYKIADIIGHKELVHLGAIPTSVDEPKIVLADITKLKGSTDWNPLFTLEEGLHETVQWWQSNLNGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBY2</accession>
    <name>E3EBY2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UPF0316 protein PPSC2_24225</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PPSC2_24225</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 7">Cell membrane</location>
            <topology evidence="2 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the UPF0316 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373641.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5168"/>
    <dbReference type="EnsemblBacteria" id="ADO59106">
        <property type="protein sequence ID" value="ADO59106"/>
        <property type="gene ID" value="PPSC2_24225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5129"/>
    <dbReference type="eggNOG" id="COG4843">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106166_1_0_9"/>
    <dbReference type="OMA" id="KLALGYI"/>
    <dbReference type="OrthoDB" id="1480783at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01515">
        <property type="entry name" value="UPF0316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019264">
        <property type="entry name" value="DUF2179"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044035">
        <property type="entry name" value="DUF5698"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022930">
        <property type="entry name" value="UPF0316"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40060">
        <property type="entry name" value="PTHR40060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10035">
        <property type="entry name" value="DUF2179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18955">
        <property type="entry name" value="DUF5698"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="59"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="DUF5698" evidence="9">
        <location>
            <begin position="20"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2179" evidence="8">
        <location>
            <begin position="110"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF10035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF18955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO59106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="18991" checksum="A558F4747B3EDCA1" modified="2011-01-11" version="1">MLKILLFILVIQLIYVSAYTLRMILTLKGQKYIAALISTVEVTVYVLGLNVVLKYLDQVASLAVYAIGYAVGILIGAWIEEKIALGYVTVKVISNEINGGIANALRDKGYGVTAWLGSGRDGERLVMEILAKRKNQNKLYQSILELDPKAFVITVEPKQFHGGFWTKAIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC14</accession>
    <name>E3EC14_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">yycG3</name>
        <name evidence="16" type="ORF">PPSC2_25335</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373887.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12830"/>
    <dbReference type="EnsemblBacteria" id="ADO59354">
        <property type="protein sequence ID" value="ADO59354"/>
        <property type="gene ID" value="PPSC2_25335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5370"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_2_9"/>
    <dbReference type="OMA" id="LTFWAVN"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 16" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="182"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="15">
        <location>
            <begin position="203"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="14">
        <location>
            <begin position="260"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="13">
        <location>
            <begin position="384"/>
            <end position="603"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO59354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="609" mass="67642" checksum="9CD13184A4DA7E71" modified="2011-01-11" version="1">MRWLSFFRTIHAKLIIIYVLLILVAMQLIGVYFVSSMKNSLTSNFTQDLQARAEMLSVLAEQDLSGSDGKMEEDSVESLRARVNNLFDFSGAEIQVLDASGKVLITSQGSHADYVGRKNTQTVVSRALQGIRDNEEYMVDEDNVRKKVVAKPVISQGKIVGAVYIAASMAELYDTMKRINNVFLSGMLIALALTAVLGVVLAHTITHPIKVMTRHATEVAEGKFDQQMPVFGEDEIGRLSVAFNYMTGRLREALSQNEEEKEKLSSILTNMSDGVVATDDHGRVILVNRRASAMLGVNENEMTGRHIAVLLGIDPEETEALYSGSSASTLLQLEPAGQDEPIVIRVTFTPIHRREFGITGTIAVLQDVTEQEEMETTRREFVANVSHELRTPLTTIRSYAEALDDGAMAEPQLAERFVGVIRNETERMIRLVTDLLHLSRLDSNEAPLRMQPADVMEMLDEVADRFSFQMKENHIRSGMFVEQGIGKVVIDRDQIDQVLDNLMSNALKYTPEGGSIRIEARRNNEGMLAISVQDTGIGIPKKDLDRIFERFYRVDKARSRNMGGTGLGLSIAREIVKAHGGQIFLESEYGQGTCTTFTLPMSGEGREAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC71</accession>
    <name>E3EC71_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">xerC3</name>
        <name evidence="6" type="ORF">PPSC2_01150</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368857.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0227"/>
    <dbReference type="EnsemblBacteria" id="ADO54214">
        <property type="protein sequence ID" value="ADO54214"/>
        <property type="gene ID" value="PPSC2_01150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.218"/>
    <dbReference type="eggNOG" id="COG0582">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027562_17_1_9"/>
    <dbReference type="OMA" id="GSWYFHC"/>
    <dbReference type="OrthoDB" id="785253at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14659">
        <property type="entry name" value="Phage_int_SAM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="5">
        <location>
            <begin position="65"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="4">
        <location>
            <begin position="166"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="43581" checksum="8A6C537FF1F32DCE" modified="2011-01-11" version="1">MAGSIKKIGTKYRVTFELGKDLNGKRLRDYATVNSEAEAKKLLTEFEHNQNRNLLVQSNAMSLIEFLNHWMDNYVKYNCEETTTYGYKNILYKHISHFFGGIELQKLQSGHIQQYYKHLMDEKNLSPNTVHKHHSLIRKALDYGLKQQLVYRNVADAVELPKRKRYEGKSYTKEQLIELLKKVKNTKLEIPIYLAVYLGLRREEIIGLKWKYVDFESRTLHIFEVRTSAGKAIITKAPKTEKSRRSLHINDDLYSLLKMHKVKQEELKNMLGSAYDNAGYVYSHDNGKPYRVNSVTEQFKTFLEKQQLPKIRLHDLRHSFASVLYNQGTDLKAISEALGHSDIGTTNKIYTHRFDKTHKNTINAMSQALKGDFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC88</accession>
    <name>E3EC88_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-382</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-382</name>
        <name evidence="2" type="ORF">PPSC2_01225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368874.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54231">
        <property type="protein sequence ID" value="ADO54231"/>
        <property type="gene ID" value="PPSC2_01225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.238"/>
    <dbReference type="eggNOG" id="ENOG50306AG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_893840_0_0_9"/>
    <dbReference type="OrthoDB" id="2168624at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="36118" checksum="B039BCCF4159573D" modified="2011-01-11" version="1">MDKKELITKAQLKNLPITESKLNRYINLGLICSDTKGRGRAKGTLSHFTEESLDILKEIQSLKGINQKHIIFTLFWRGYNISWHKLKDAVYNFTLEIEDKFTEVNNKTKDPEFADYILNEMIEESVPKKKPGRPSNQDLKELKQQQEAEKESFRNILSVVQLLAAGSSMTCQGLKLFSRPNPNVTTQTIADADMFLDWLNLRTIKESIQRSEKNDYDNILEIIHCIQQYWNEIEAVSKSPTVNSAIKEIVQQINRFYPGGFTFRNVTLIRYLILAMLAFGKHQMILEFLKSDQTKTLFNQFVNLPFEKNKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECA0</accession>
    <name>E3ECA0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-392</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-392</name>
        <name evidence="1" type="ORF">PPSC2_01275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368885.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0257"/>
    <dbReference type="EnsemblBacteria" id="ADO54243">
        <property type="protein sequence ID" value="ADO54243"/>
        <property type="gene ID" value="PPSC2_01275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.251"/>
    <dbReference type="eggNOG" id="COG1357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052161_0_0_9"/>
    <dbReference type="OrthoDB" id="1018137at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="415" mass="47515" checksum="A8BFCCE29A4647EE" modified="2011-01-11" version="1">MKKSIDELEPQWRAILNQAWFLISRDWALKFKTTQEQRIQACVEEFRGYCRHIRQEQLQGKERIGYITYSMLRTTWLEERPAYLVEASDALWMLDPQPIRLEWDTSWAYSYWTDLQRQLRGEVEKQQVSLSELEWEQVMLEAAVHIHALVVNVVRSAMKQAVYLSEFQELEREETFEIRVGEYLDHSVSVYREDRRAMEANEIRSWLEEKEEHAYSYQALTQVHLSDGDFSLLDFRYTAFRQIRSEHSRLHGCVLVGTVWQESELNGIDLTYSLLHGANFSGCSMKGAILDVVIGNARYGSDASLDWEPLGFAGVDFTGASLQGARFHDAQLRGAIFQEALLQKASLDGADLTDACFVGANVTGASFKEACLIGANFTGANVQGVIFTDEQRRGAIGLEWSTQVRDVGSKGEWLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECG3</accession>
    <name>E3ECG3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-460</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-460</name>
        <name evidence="1" type="ORF">PPSC2_01585</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368948.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14305"/>
    <dbReference type="EnsemblBacteria" id="ADO54306">
        <property type="protein sequence ID" value="ADO54306"/>
        <property type="gene ID" value="PPSC2_01585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.316"/>
    <dbReference type="eggNOG" id="ENOG50332XW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133229_0_0_9"/>
    <dbReference type="OMA" id="VRISQWD"/>
    <dbReference type="OrthoDB" id="1996736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="16755" checksum="C1DFAC8BFF487405" modified="2011-01-11" version="1">MTESTKRVRISQWDALMLESLRSLGWSHEELIHRAQQNELPTDGQFDYTELATGLASKEPEVFVNAVTDGYQIKYNTIRGIRSWIAVALGREPELSLEEGSEAVTSELTQAEYDRLQQVLSLGWVIQEVRPATGDTAGMYRIVPAVQTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS3</accession>
    <name>E3ECS3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Probable manganese-dependent inorganic pyrophosphatase</fullName>
            <ecNumber evidence="8">3.6.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Pyrophosphate phospho-hydrolase</fullName>
            <shortName evidence="8">PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">ppaC</name>
        <name evidence="10" type="ORF">PPSC2_01870</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>diphosphate + H2O = H(+) + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:24576"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="3.6.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="8">Binds 2 manganese ions per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the PPase class C family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.1" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54367.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025674437.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14635"/>
    <dbReference type="EnsemblBacteria" id="ADO54367">
        <property type="protein sequence ID" value="ADO54367"/>
        <property type="gene ID" value="PPSC2_01870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.376"/>
    <dbReference type="eggNOG" id="COG1227">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025243_0_1_9"/>
    <dbReference type="OrthoDB" id="732679at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004427">
        <property type="term" value="F:inorganic diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.310.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00207">
        <property type="entry name" value="PPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001667">
        <property type="entry name" value="DDH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038763">
        <property type="entry name" value="DHH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004097">
        <property type="entry name" value="DHHA2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038222">
        <property type="entry name" value="DHHA2_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022934">
        <property type="entry name" value="Mn-dep_inorganic_PyrPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01368">
        <property type="entry name" value="DHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02833">
        <property type="entry name" value="DHHA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01131">
        <property type="entry name" value="DHHA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64182">
        <property type="entry name" value="SSF64182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 8" id="KW-0464">Manganese</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHHA2" evidence="9">
        <location>
            <begin position="181"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM01131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54367.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="33576" checksum="B5D68B0E30871DCA" modified="2015-05-27" version="2">MAKTLIFGHKNPDTDTICSAIAYADLKTKLGADVEPVRLGEVNGETQYALDYFKVSAPRLVEQVATETDSVILVDHNERQQSATDIDKVRVTEVIDHHRIANFETSQPLYFRAEPVGCTATILNKLYKENGVAIPKEIAGLMLSAIISDSLLFKSPTCTDQDVAAARELAEIAGVDADRYGFDLLKAGADLSGHTIEQLVSLDAKEFQMNGRKVEIAQVNAVDVNDVLSRQADLEAALAQTIAAKNLDLFLFVVTDIVNSDSIGIALGSQAQAVEKAYNVQLDDNKAVLKGVVSRKSQIVPVLTEAFNSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED30</accession>
    <name>E3ED30_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YdcK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydcK</name>
        <name evidence="2" type="ORF">PPSC2_06325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369929.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19270"/>
    <dbReference type="EnsemblBacteria" id="ADO55298">
        <property type="protein sequence ID" value="ADO55298"/>
        <property type="gene ID" value="PPSC2_06325"/>
    </dbReference>
    <dbReference type="GeneID" id="66573674"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1308"/>
    <dbReference type="eggNOG" id="COG3091">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_123820_0_0_9"/>
    <dbReference type="OMA" id="LVHYHLH"/>
    <dbReference type="OrthoDB" id="1262202at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051716">
        <property type="term" value="P:cellular response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006640">
        <property type="entry name" value="SprT-like_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035240">
        <property type="entry name" value="SprT_Zn_ribbon"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10263">
        <property type="entry name" value="SprT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17283">
        <property type="entry name" value="Zn_ribbon_SprT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00731">
        <property type="entry name" value="SprT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SprT-like" evidence="1">
        <location>
            <begin position="17"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="170" mass="19794" checksum="60385B99123C74E7" modified="2011-01-11" version="1">MESESLSNSMNPSMSNKELQEWVERISLESFGVPFQHQATFNSRLSSTGGRYFMKSHHIEINPHQLAAYGRSEVEKIIKHELCHYHLHLRGMGYQHRDADFKAWLARVGGSRHCQTLPGRVGRKPQPYRYKLVCVSCQQEYMRKRKMNPQRYRCGKCGGKLRLLTLDVTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDA9</accession>
    <name>E3EDA9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bacitracin ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bcrA1</name>
        <name evidence="5" type="ORF">PPSC2_02470</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369106.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15205"/>
    <dbReference type="EnsemblBacteria" id="ADO54466">
        <property type="protein sequence ID" value="ADO54466"/>
        <property type="gene ID" value="PPSC2_02470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.476"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="MALLSHD"/>
    <dbReference type="OrthoDB" id="1833499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="33840" checksum="A693E3816750890A" modified="2011-01-11" version="1">MNESIIETNSLSKIYKGRAAVNQLDLKIARGDIYGFLGPNGAGKTTTIRMLLGLIRPTRGTIRIFGKDIRRHRLDILRKVGSLVEYPSYYGHLNAVENLEAIRRILNVPKENIAEVLEVVRLTKHAKRPVKGYSLGMKQRLGIAAALLGNPEVLILDEPTNGLDPEGIQEMRELIQAMPKQRGITVLVSSHLLSEVEHMANTVGIIREGQLVFQNTIHNLRQESAGGIRIVVSEPEAAQLIAREQGYHSVKDGSALDFDNMNDAAVALLVRRLVENTHAVYRVEERRKSLEDMFMQVVGKGGGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDI6</accession>
    <name>E3EDI6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YpsA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ypsA</name>
        <name evidence="1" type="ORF">PPSC2_04815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54965.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17710"/>
    <dbReference type="EnsemblBacteria" id="ADO54965">
        <property type="protein sequence ID" value="ADO54965"/>
        <property type="gene ID" value="PPSC2_04815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.968"/>
    <dbReference type="eggNOG" id="COG4474">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105319_0_0_9"/>
    <dbReference type="OMA" id="LEWVITG"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010697">
        <property type="entry name" value="YspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38440">
        <property type="entry name" value="PTHR38440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06908">
        <property type="entry name" value="YpsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021290">
        <property type="entry name" value="DUF1273"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54965.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="21543" checksum="410479F28B70CC53" modified="2015-05-27" version="2">MKNLLVSGYRAHELNIFSQKHEGIPYIKKAITSRLIPLIEDGLEWVITLGQYGVDLWACEVVIALKQQYPDLKCSIMMAYQNMEEKWKEDKKEYFQQICAEVDYVGVVSRQPYQGIWQLKARDELLFRKTDGLLLVYDEDAGEGSPRFMKELALKKQQAEGYQYISISSEDIQSIADEERLFMDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDV0</accession>
    <name>E3EDV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">YabE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yabE</name>
        <name evidence="4" type="ORF">PPSC2_00140</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368668.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13155"/>
    <dbReference type="EnsemblBacteria" id="ADO54016">
        <property type="protein sequence ID" value="ADO54016"/>
        <property type="gene ID" value="PPSC2_00140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.27"/>
    <dbReference type="eggNOG" id="COG3583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3584">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036884_0_1_9"/>
    <dbReference type="OMA" id="ASPWPHC"/>
    <dbReference type="OrthoDB" id="2027419at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009254">
        <property type="term" value="P:peptidoglycan turnover"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010611">
        <property type="entry name" value="3D_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007137">
        <property type="entry name" value="DUF348"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011098">
        <property type="entry name" value="G5_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06725">
        <property type="entry name" value="3D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03990">
        <property type="entry name" value="DUF348"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07501">
        <property type="entry name" value="G5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01208">
        <property type="entry name" value="G5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="SSF50685"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51109">
        <property type="entry name" value="G5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="G5" evidence="3">
        <location>
            <begin position="165"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="382" mass="42046" checksum="9C2FEE45EDEE3CF1" modified="2011-01-11" version="1">MGIFRKEETHESRSSSMSYVLRWKQENVRQAALVAIFLIALTIMISILMYTQSKKQVFFVIDGKASAVETRESKLQDLLNEHSISLQPHDTISMPLNGAVQDGDRVVIKRANQVKVSSGNETKKLYTTENTVEGAIRTSGYKLSSTDKVYPALDASVSANMDIKIVRVKKQQVEQKKQVPYQVIKTADPSLYKGDNRVIQSGKSGVVVQHVQKVYHDGKLVSKQLVNKEVAQNRVDKVIAVGTKKKPVVLAASIGPKDAVKATKVSSGSAVRKAGINFNYKKVLQNVSMTAYSAQEPGIGTRTASGTRVTEGRTIAVDPNVIPIGWWVYIEGVGFRRAEDTGGAIKGHKIDVYYESLSRANQFGRKHGKTVYVIGPVKPEIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE30</accession>
    <name>E3EE30_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">frlC1</name>
        <name evidence="2" type="ORF">PPSC2_02760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369150.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15560"/>
    <dbReference type="EnsemblBacteria" id="ADO54510">
        <property type="protein sequence ID" value="ADO54510"/>
        <property type="gene ID" value="PPSC2_02760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.520"/>
    <dbReference type="eggNOG" id="COG1082">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050006_5_1_9"/>
    <dbReference type="OMA" id="WGIAPHL"/>
    <dbReference type="OrthoDB" id="1007505at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="19"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31656" checksum="F68031EC76BAA8FB" modified="2011-01-11" version="1">MKIAGMNITYRYFPFEHFLDQVAELGIEHIELWAGEPHLYVYRNVLGNLRHVRQQLKSRDMKVVCYTTEQCVYPFNIAASDLQLRQKSIDYFIDNLYAALELETDMMLVTSGIGDFAVPQLESWKYASDSIYQISRVAEKEGMTLALEPLTRFESNLIIDAKGIKRMLEEIRSPSLKGMIDTVAMQLANETPEDYFSLLPEMVHFHLIDGDGSSDAHLALDDGVLNWREYLTSLQSHNYEGACTLEIMGFNYYQNPQEALRESVRKIRGMQFLSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEK2</accession>
    <name>E3EEK2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ketol-acid reductoisomerase (NADP(+))</fullName>
            <shortName evidence="8">KARI</shortName>
            <ecNumber evidence="8">1.1.1.86</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Acetohydroxy-acid isomeroreductase</fullName>
            <shortName evidence="8">AHIR</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Alpha-keto-beta-hydroxylacyl reductoisomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">ilvC</name>
        <name evidence="12" type="ORF">PPSC2_07080</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(2R)-2,3-dihydroxy-3-methylbutanoate + NADP(+) = (2S)-2-acetolactate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:22068"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:49072"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="1.1.1.86"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(2R,3R)-2,3-dihydroxy-3-methylpentanoate + NADP(+) = (S)-2-ethyl-2-hydroxy-3-oxobutanoate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:13493"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:49256"/>
            <dbReference type="ChEBI" id="CHEBI:49258"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.86"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 8">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 2/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8 9">Belongs to the ketol-acid reductoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.86" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309387.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20060"/>
    <dbReference type="EnsemblBacteria" id="ADO55453">
        <property type="protein sequence ID" value="ADO55453"/>
        <property type="gene ID" value="PPSC2_07080"/>
    </dbReference>
    <dbReference type="GeneID" id="66573520"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1461"/>
    <dbReference type="eggNOG" id="COG0059">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033821_0_1_9"/>
    <dbReference type="OMA" id="KGMDWMY"/>
    <dbReference type="OrthoDB" id="188901at2"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00056"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00060"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004455">
        <property type="term" value="F:ketol-acid reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00435">
        <property type="entry name" value="IlvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013023">
        <property type="entry name" value="KARI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000506">
        <property type="entry name" value="KARI_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013116">
        <property type="entry name" value="KARI_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014359">
        <property type="entry name" value="KARI_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21371">
        <property type="entry name" value="PTHR21371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01450">
        <property type="entry name" value="IlvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07991">
        <property type="entry name" value="IlvN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000116">
        <property type="entry name" value="IlvC_gammaproteo"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00465">
        <property type="entry name" value="ilvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51851">
        <property type="entry name" value="KARI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51850">
        <property type="entry name" value="KARI_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8 9" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="12" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 8 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0521">NADP</keyword>
    <keyword evidence="8 9 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="KARI N-terminal Rossmann" evidence="10">
        <location>
            <begin position="1"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="KARI C-terminal knotted" evidence="11">
        <location>
            <begin position="183"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="26"/>
            <end position="29"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="53"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="227"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="231"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="35796" checksum="3765238DEDCA95B0" modified="2011-01-11" version="1">MAVTTYYEKDAELSVLKGKTVAVIGYGSQGHAQAQNLRDSGVNVVIGLREGKSADVARNDGFEVLNVADATSRADVVQILLPDETQASVYKNEIEPNLKKGAALLFSHGFNVHFGQIVAPKDSDVLLVAPKSPGHMVRRTYVEGFGVPGLIAIEQDATGQAKEIGLAYAKGIGCTRAGVIETSFREETETDLFGEQAVLCGGVSALVKAGFETLTEAGYAPEMAYFECLHELKLIVDLMYEGGLATMRDSISNTAEYGDYVTGPRVVTEDTKKAMKDVLTDIQQGKFARDFILENQSGRAFLTATRRNEANHPIEVVGGQLREMMHWIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN1</accession>
    <name>E3EEN1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha</fullName>
            <shortName evidence="10">ACCase subunit alpha</shortName>
            <shortName evidence="10">Acetyl-CoA carboxylase carboxyltransferase subunit alpha</shortName>
            <ecNumber evidence="10">2.1.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">accA</name>
        <name evidence="12" type="ORF">PPSC2_08245</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>acetyl-CoA + N(6)-carboxybiotinyl-L-lysyl-[protein] = malonyl-CoA + N(6)-biotinyl-L-lysyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:54728"/>
            <dbReference type="Rhea" id="RHEA-COMP:10505"/>
            <dbReference type="Rhea" id="RHEA-COMP:10506"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:83144"/>
            <dbReference type="ChEBI" id="CHEBI:83145"/>
            <dbReference type="EC" id="2.1.3.15"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Lipid metabolism; malonyl-CoA biosynthesis; malonyl-CoA from acetyl-CoA: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the AccA family.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.15" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370339.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20850"/>
    <dbReference type="EnsemblBacteria" id="ADO55718">
        <property type="protein sequence ID" value="ADO55718"/>
        <property type="gene ID" value="PPSC2_08245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1733"/>
    <dbReference type="eggNOG" id="COG0825">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015486_0_2_9"/>
    <dbReference type="OMA" id="TPWQRVQ"/>
    <dbReference type="OrthoDB" id="886663at2"/>
    <dbReference type="UniPathway" id="UPA00655">
        <property type="reaction ID" value="UER00711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016743">
        <property type="term" value="F:carboxyl- or carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001295">
        <property type="term" value="P:malonyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00823">
        <property type="entry name" value="AcetylCoA_CT_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001095">
        <property type="entry name" value="Acetyl_CoA_COase_a_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011763">
        <property type="entry name" value="COA_CT_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42853">
        <property type="entry name" value="PTHR42853"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03255">
        <property type="entry name" value="ACCA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01069">
        <property type="entry name" value="ACCCTRFRASEA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00513">
        <property type="entry name" value="accA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50989">
        <property type="entry name" value="COA_CT_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 10" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="3 10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CoA carboxyltransferase C-terminal" evidence="11">
        <location>
            <begin position="38"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="36673" checksum="E1AE8C5635531729" modified="2011-01-11" version="1">MAGELPYEKPLVEMRQKIEELKQFGQDKQIDFTDEINRLEERYLQMEEEIYSNITASQKMHLARHHQRPTSLDLIEQVFTDFIELHGDRLFGDDLAVVGGIAKLNGIPVTVIGQQRGKDTKDNIARFFGSAHPEGFRKGLRLMQQADKFKRPIITFIDTKGAYPGNTAEERGQSEAIARNLREMAKLSVPVICVVIGEGGSGGALAFAVGNRVLMLEHAIYSAISPNGAASILWKDASKADQAAEAMKITANDLLRMEIIEDIVPEPKGGAHRNYEVTAAAIKELLERHLADLTNMSCDELREDRYQKFRKIGQYTFLKPSESEPML</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EES6</accession>
    <name>E3EES6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tautomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yusQ</name>
        <name evidence="2" type="ORF">PPSC2_08470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 4-oxalocrotonate tautomerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370382.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21075"/>
    <dbReference type="EnsemblBacteria" id="ADO55763">
        <property type="protein sequence ID" value="ADO55763"/>
        <property type="gene ID" value="PPSC2_08470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1780"/>
    <dbReference type="eggNOG" id="COG1942">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_148073_0_0_9"/>
    <dbReference type="OMA" id="PEDDQFM"/>
    <dbReference type="OrthoDB" id="2013680at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.429.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037479">
        <property type="entry name" value="Tauto_MSAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014347">
        <property type="entry name" value="Tautomerase/MIF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38460">
        <property type="entry name" value="PTHR38460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14552">
        <property type="entry name" value="Tautomerase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55331">
        <property type="entry name" value="SSF55331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="128" mass="14973" checksum="AD63439553587CA3" modified="2011-01-11" version="1">MPFVRVGYTEQQYTEQELPGISRCIMTALIEHFQVPPNDYFQVFHAHKQSEFYYSPDYLNVPRTDKLLYIQITMGSGRTTEQKKSFYQTLAELLSIECKIRSEDVFVTLVETELEDWSFGNGLAQMIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEY8</accession>
    <name>E3EEY8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Polyamine aminopropyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Putrescine aminopropyltransferase</fullName>
            <shortName evidence="3">PAPT</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Spermidine synthase</fullName>
            <shortName evidence="3">SPDS</shortName>
            <shortName evidence="3">SPDSY</shortName>
            <ecNumber evidence="3">2.5.1.16</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 8" type="primary">speE</name>
        <name evidence="8" type="ORF">PPSC2_00610</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 6">
            <text>putrescine + S-adenosyl 3-(methylsulfanyl)propylamine = H(+) + S-methyl-5'-thioadenosine + spermidine</text>
            <dbReference type="Rhea" id="RHEA:12721"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:57443"/>
            <dbReference type="ChEBI" id="CHEBI:57834"/>
            <dbReference type="ChEBI" id="CHEBI:326268"/>
            <dbReference type="EC" id="2.5.1.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amine and polyamine biosynthesis; spermidine biosynthesis; spermidine from putrescine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer or homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the spermidine/spermine synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.16" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54111.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885838.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13600"/>
    <dbReference type="EnsemblBacteria" id="ADO54111">
        <property type="protein sequence ID" value="ADO54111"/>
        <property type="gene ID" value="PPSC2_00610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.120"/>
    <dbReference type="eggNOG" id="COG0421">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048199_0_0_9"/>
    <dbReference type="OrthoDB" id="1613081at2"/>
    <dbReference type="UniPathway" id="UPA00248">
        <property type="reaction ID" value="UER00314"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004766">
        <property type="term" value="F:spermidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008295">
        <property type="term" value="P:spermidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00198">
        <property type="entry name" value="Spermidine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030374">
        <property type="entry name" value="PABS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030373">
        <property type="entry name" value="PABS_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001045">
        <property type="entry name" value="Spermi_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035246">
        <property type="entry name" value="Spermidine_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037163">
        <property type="entry name" value="Spermidine_synt_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11558">
        <property type="entry name" value="PTHR11558"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17284">
        <property type="entry name" value="Spermine_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00417">
        <property type="entry name" value="speE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01330">
        <property type="entry name" value="PABS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51006">
        <property type="entry name" value="PABS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0620">Polyamine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0745">Spermidine biosynthesis</keyword>
    <keyword evidence="1 3 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PABS" evidence="7">
        <location>
            <begin position="2"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-methyl-5'-thioadenosine binding" evidence="3">
        <location>
            <begin position="137"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Spermidine binding" evidence="3">
        <location>
            <begin position="155"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3 4">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>S-methyl-5'-thioadenosine</name>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>spermidine</name>
            <dbReference type="ChEBI" id="CHEBI:57834"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>spermidine</name>
            <dbReference type="ChEBI" id="CHEBI:57834"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>S-methyl-5'-thioadenosine</name>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="162"/>
        </location>
        <ligand>
            <name>S-methyl-5'-thioadenosine</name>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54111.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31224" checksum="57ED459DBBA59583" modified="2015-05-27" version="2">MDLWFTEKQTPSFGITAKIKQTYVSEKTDFQDLAMIETEEFGNMLVLDGMVMTTVKDEFVYHEMVAHPALNTHPNPKKVLVVGGGDGGVIREVIKHPEVEKAVLVEIDGKVIEYSKKYLPEIAGKLDESNVEVLVNDGYMHIIEHKNEYDVIMVDSTEPVGPAAPLFERGFYQGIFEALKEDGIFVAQTDNPWFKADLIQKVNKDVKEIFPIVRVYGANIPTYPSGLWTFTLGSKKYDPLEVDENQIPEMDTRYYSPRLHKAAFVLPKFVEDLTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF53</accession>
    <name>E3EF53_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">msmR1</name>
        <name evidence="3" type="ORF">PPSC2_03040</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369212.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EF53"/>
    <dbReference type="STRING" id="1406.LK13_15855"/>
    <dbReference type="EnsemblBacteria" id="ADO54573">
        <property type="protein sequence ID" value="ADO54573"/>
        <property type="gene ID" value="PPSC2_03040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.581"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="WEYFWIS"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="172"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31851" checksum="211CDE4A13EC809B" modified="2011-01-11" version="1">MIEYLPRSKQHSELYLTQFGIEKCIPSHFFGPAIRDHYLLHYVLDGEGTFEVGGFSYRLRKGQWFLICPQVITYYQADAVNPWSYCWFGFNGTLAETLLKQAALTMTSPILYFEGDHLIYQYLQQMNESSGCLKARETRLTGLLYLMLSELIEFSPAASSDQKEGRAEIYVEKVKDFIEMNYAQKITIEHIAHFIGLNRSYLCSLFKQRVNTSIQDYLIRYRINKACEMMGNAELSIGDISRSVGYNDPLLFSKIFKKVKGFSPKHYRAETHAQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF57</accession>
    <name>E3EF57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Protein lplB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplB1</name>
        <name evidence="7" type="ORF">PPSC2_03060</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54577.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599436.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15875"/>
    <dbReference type="EnsemblBacteria" id="ADO54577">
        <property type="protein sequence ID" value="ADO54577"/>
        <property type="gene ID" value="PPSC2_03060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.585"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="231"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="284"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="88"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54577.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="36363" checksum="62FA1E977D78B34D" modified="2015-05-27" version="2">MKAVTANSENVYNKPKRNAWKVFKSQRYLYYMSIPFVIWVFIFQYLPLWGWTMAFQKYRPGLSFFEQKWVGLEHFRTLFQDDHFYQVLRNTLAMSLMGLVAGFIVPVVFALLLNEVRIQVVKRFVQTVSYLPHFVSWVVAAGIVTKMLSADGGVVNDMLMGLGIIDQPVQFMAQGKLFWWVVTFGDIWKETGWNAIIYLAAIAGIGPELYEAARVDGASRFQQMWHITLPGIRPTIIILLIMSIGHLLGTGFEKQFLLGNHLVIDYSEVLDLYALNYGLAMGRYSFGTAINIFNSVISLVLLFAANGIFKRYTNESIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF62</accession>
    <name>E3EF62_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yncA</name>
        <name evidence="2" type="ORF">PPSC2_03080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369221.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15895"/>
    <dbReference type="EnsemblBacteria" id="ADO54582">
        <property type="protein sequence ID" value="ADO54582"/>
        <property type="gene ID" value="PPSC2_03080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.589"/>
    <dbReference type="eggNOG" id="COG3393">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1060305_0_0_9"/>
    <dbReference type="OMA" id="MVSHELL"/>
    <dbReference type="OrthoDB" id="1780260at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="118"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="30027" checksum="0AD74794DDC723EC" modified="2011-01-11" version="1">MISHRLLSDETVYQLTNQIHRDQHLLFYSYLSQRKEQAKFVGQYVDDKLTGVLAYFCGLSFPAFSFHCINREKLNFSALIAFTEELIQLKKNTVCGTILCDRDLQLFQSHGLITGNPQRFLTMKHMDQSKLLDSNLAELVKENEVPEIVDLLRNGGMKFFTRSELEQYPFLGIKECGHFIAVGGFHFYDSKLVELGNIYTSPAHRGKGLAKHLTSQLTKLGRTLSSDVYLGVLEENQAAVQLYKGLGYEVTAEQTIVDFKLSID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF89</accession>
    <name>E3EF89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sodium ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yhaQ</name>
        <name evidence="6" type="ORF">PPSC2_03210</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369246.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16020"/>
    <dbReference type="EnsemblBacteria" id="ADO54609">
        <property type="protein sequence ID" value="ADO54609"/>
        <property type="gene ID" value="PPSC2_03210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.615"/>
    <dbReference type="eggNOG" id="COG4152">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="TQRFSYW"/>
    <dbReference type="OrthoDB" id="1179151at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025302">
        <property type="entry name" value="DUF4162"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13732">
        <property type="entry name" value="DUF4162"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33808" checksum="CAA7D68404C36573" modified="2011-01-11" version="1">MSMLQLEKVVKQYGNHTAVNGISLNVNGGEIYGLLGGNGAGKTTTMRMVLGLIYPDGGSIQYEGKPYSKELQRTMGYLPEERGLYPKVKVSEQINYLGRLRGMSAKEADKSLRYWLERFGVPEYYDKRIEELSKGNQQKMGFIAAVVHRPTLLILDEAFSGLDPVNVELLKDTVKELRDDGAAILFSTHRMEHVEELCRHITILHRSNTVVQGSVQEIKGRYPREKVRLITTGEVSGLEQLPGVRSIENMDRGWMLHIEQPAAAKLILQTALGQTDVEHFEIKEPTLNEIFIREVGDSHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF98</accession>
    <name>E3EF98_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Polyketide synthase regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pucR</name>
        <name evidence="5" type="ORF">PPSC2_05275</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CdaR family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369694.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18190"/>
    <dbReference type="EnsemblBacteria" id="ADO55061">
        <property type="protein sequence ID" value="ADO55061"/>
        <property type="gene ID" value="PPSC2_05275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1069"/>
    <dbReference type="eggNOG" id="COG2508">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017436_2_1_9"/>
    <dbReference type="OMA" id="QTLYHRI"/>
    <dbReference type="OrthoDB" id="1439158at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2840">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041522">
        <property type="entry name" value="CdaR_GGDEF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025736">
        <property type="entry name" value="PucR_C-HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042070">
        <property type="entry name" value="PucR_C-HTH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012914">
        <property type="entry name" value="PucR_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17853">
        <property type="entry name" value="GGDEF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13556">
        <property type="entry name" value="HTH_30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07905">
        <property type="entry name" value="PucR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PucR" evidence="2">
        <location>
            <begin position="11"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF_2" evidence="4">
        <location>
            <begin position="320"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="domain" description="HTH_30" evidence="3">
        <location>
            <begin position="488"/>
            <end position="546"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF17853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="554" mass="63796" checksum="56D715A436A649D6" modified="2011-01-11" version="1">MKGKKTFTIADVLERPVFRRAKLAAGEQGVNRRVGWVHVLEITNVSPFVSRHDLILTTGLWLIRKGEERAEYMEQLIRSEAAGLCVELGTSIYEIPPEILELAEQHHFPVIVFEQPVRFVEITQDIHSLLINRHHELLKDLERFSRQLQQETLRSTDMNALLRVLHDYAARQVIYMSSIDTNRFVPSVQPDVADHIADFYAHEVETSMTADREGHLLFHLNESTAVLFQPVVCFGQVFSAVGVVLHNEMPTEEMSLLIDYTAKAAATLVLRTQFLEDRLLRNQNELIQDVLNGQLPNEEQAQTRMGLRLLTKGRYLFWAGVIEVEHQDKDASQVRKESINQDVLVLLRSLLKKEALHNLLMMKGSQCYILCAKEELTLRSIAQMKKVLAHTVQYIQNYAAGQLDKVRIHAGFGKVRHRMTGTDRSFEEAYQVIEVARSVPVMKDRLFYDSIGIYQLLKAVPRIPFLQEFVQDHLGELIAHDREHHMQLLDTLDAYFQCHGSKRDTAGILYIHRQTLYNRLDKINEIVEGNLADSDKRRCLEMALLAYRMLQAEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFA2</accession>
    <name>E3EFA2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lysophospholipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypmR</name>
        <name evidence="2" type="ORF">PPSC2_05295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369698.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18210"/>
    <dbReference type="EnsemblBacteria" id="ADO55065">
        <property type="protein sequence ID" value="ADO55065"/>
        <property type="gene ID" value="PPSC2_05295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1073"/>
    <dbReference type="eggNOG" id="COG2755">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051989_5_2_9"/>
    <dbReference type="OMA" id="YARWNED"/>
    <dbReference type="OrthoDB" id="1247435at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH_hydro" evidence="1">
        <location>
            <begin position="13"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="25156" checksum="9BD1E307E85CF6FC" modified="2011-01-11" version="1">MSSTGHTRILFQGDSITDGGRGRNEDANHWLGQSYVYLIAGALGSRLADTQPEFVNRGVSGDRVSDLYARWNEDTFSLQPNLLSILIGVNDAWRIVEQEPSGVTDRFERAYCHLLEETREVMPDTGLVLCEPFILKTGATEARWDIWQEKITGYQRIVRQLADKYGAVFVPLQSMLNEAATKADASYWLHDGVHPTAVGHQLIADQWIDIVQKSPLAIRQPSRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFA5</accession>
    <name>E3EFA5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mcpA1</name>
        <name evidence="7" type="ORF">PPSC2_05305</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369701.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18220"/>
    <dbReference type="EnsemblBacteria" id="ADO55068">
        <property type="protein sequence ID" value="ADO55068"/>
        <property type="gene ID" value="PPSC2_05305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1075"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_18_9"/>
    <dbReference type="OMA" id="MDGMGEL"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="65"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="137"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="424" mass="46883" checksum="AE138A36EBFECAAE" modified="2011-01-11" version="1">MKMSLGTKMVTAFVSISAITYGTSAFFIFVLKDWLAHGTQEWVYTSIILLLGVLWSGILGWLISKLLTRPIVRLAKAAEEASSGNLSVVIPERRSDDEIKVLYDAFRHLMLNIKDMFNEISYSTRTTSQSAENLSLAIVQATAQIESMSTVVEDILDGVEQQKQASAQSIKTADRMLGDFKMMRSKSGHMLELSGHMEHSVDSTQTVFSSLMDGMGELTASHSRSQQVIARLEKEASQIEAITSTVKDIAEQTHLLALNASIEAARAGEEGNGFAVVAHQIRALAAQSTESVQQINAIVSRVQSQIVETVELMHQQTSLVSAEAERTSSVDQTLNRLNAIVREFVESIRTMEEAVTEQTNRVDQTFEQIHRIQQMSGAFSEGAHKIYTAAHEETAIMQEISSSSEDLKVLTNKLMMKTRGINYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFB4</accession>
    <name>E3EFB4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="2">PPIase</shortName>
            <ecNumber evidence="2">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ppiB1</name>
        <name evidence="4" type="ORF">PPSC2_05335</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 2">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369710.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18250"/>
    <dbReference type="EnsemblBacteria" id="ADO55077">
        <property type="protein sequence ID" value="ADO55077"/>
        <property type="gene ID" value="PPSC2_05335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1081"/>
    <dbReference type="eggNOG" id="COG0652">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012062_16_0_9"/>
    <dbReference type="OMA" id="VPFHRVM"/>
    <dbReference type="OrthoDB" id="1861282at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000413">
        <property type="term" value="P:protein peptidyl-prolyl isomerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020892">
        <property type="entry name" value="Cyclophilin-type_PPIase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044666">
        <property type="entry name" value="Cyclophilin_A-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45625">
        <property type="entry name" value="PTHR45625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="SSF50891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00170">
        <property type="entry name" value="CSA_PPIASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0697">Rotamase</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5006523893" description="Peptidyl-prolyl cis-trans isomerase" evidence="2">
        <location>
            <begin position="30"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="3">
        <location>
            <begin position="67"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="24062" checksum="22F2C53A44D82E6F" modified="2011-01-11" version="1">MNRKSIRPWYTLCLLAIMLVLVAGCGTKAADVEAASRTSTTTPAATKDKSKTVSHPVVTIVMNDGKKIKLELYPEVAPNTVNNFISLVQKGAYNGTIFHRVIPGFMIQGGDPQGNGTGGPGYSIKGEFKSNGVNNTLKHTRGVLSMARSADLDSAGSQFFIMVADADYLDGQYAAFGKVTSGMDVVDAIVNSKRDSNDKPTKPATMKKVTVDTLGKKYPEPVKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFC5</accession>
    <name>E3EFC5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05380</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369721.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1107"/>
    <dbReference type="EnsemblBacteria" id="ADO55088">
        <property type="protein sequence ID" value="ADO55088"/>
        <property type="gene ID" value="PPSC2_05380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1091"/>
    <dbReference type="eggNOG" id="ENOG502ZFAJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2344057_0_0_9"/>
    <dbReference type="OMA" id="DIWTIYE"/>
    <dbReference type="OrthoDB" id="1836626at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="11395" checksum="8AF9F6FD3C5E99F7" modified="2011-01-11" version="1">MEWYMFGPMISRIRVGQKASTPGYSRTVIRRPDGLYWTDGGQAGKIVEIRDYLFSDIWTIYEDEECEPWIGLREQMEQREQEMIINQYEDFTNND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFQ2</accession>
    <name>E3EFQ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370393.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1802"/>
    <dbReference type="EnsemblBacteria" id="ADO55774">
        <property type="protein sequence ID" value="ADO55774"/>
        <property type="gene ID" value="PPSC2_08525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1791"/>
    <dbReference type="HOGENOM" id="CLU_2480452_0_0_9"/>
    <dbReference type="OrthoDB" id="1865117at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="87" mass="10344" checksum="34C3B45FFAA622DB" modified="2011-01-11" version="1">MAVPFFRAGGEEKISKNNEKPKRNKPKILTKYDQFIVSRLKAIPVWVREGTTDVEIARRLSIHIWTLGDYRRKYPKFAEVLERPTKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGI0</accession>
    <name>E3EGI0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-770</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-770</name>
        <name evidence="2" type="ORF">PPSC2_03250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369256.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0636"/>
    <dbReference type="EnsemblBacteria" id="ADO54619">
        <property type="protein sequence ID" value="ADO54619"/>
        <property type="gene ID" value="PPSC2_03250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.627"/>
    <dbReference type="eggNOG" id="COG4319">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_128061_0_0_9"/>
    <dbReference type="OMA" id="DDISYFD"/>
    <dbReference type="OrthoDB" id="1644255at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13474">
        <property type="entry name" value="SnoaL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="24"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="16747" checksum="B0D92B3466403C34" modified="2011-01-11" version="1">MSVNIKEVAETVLNIERANNERWNQGDCFGYLDSYSDDISYFDPVTEKLIVGNSAVREHILSRYKNPNIIRSEYLNPDVAVTQAGDLAVLSYNLYNYVAGEDGQEKLQKSWNTTEVFRLINGEWRTVHSHWSFVRHPGIISGLDTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGI2</accession>
    <name>E3EGI2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATPase AAA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rarA</name>
        <name evidence="4" type="ORF">PPSC2_03260</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369258.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0638"/>
    <dbReference type="EnsemblBacteria" id="ADO54621">
        <property type="protein sequence ID" value="ADO54621"/>
        <property type="gene ID" value="PPSC2_03260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.629"/>
    <dbReference type="eggNOG" id="COG2256">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017985_0_3_9"/>
    <dbReference type="OMA" id="ACEFVGM"/>
    <dbReference type="OrthoDB" id="977094at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009378">
        <property type="term" value="F:four-way junction helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032423">
        <property type="entry name" value="AAA_assoc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021886">
        <property type="entry name" value="MgsA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008824">
        <property type="entry name" value="RuvB-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16193">
        <property type="entry name" value="AAA_assoc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12002">
        <property type="entry name" value="MgsA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05496">
        <property type="entry name" value="RuvB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="3">
        <location>
            <begin position="50"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="442" mass="49689" checksum="073CD2EC152AC163" modified="2011-01-11" version="1">MIQGSLFDDEYDQGRPLANRVRPQNLEEFVGQKHLLEPGKVLREMIENDQVSSMIFWGPPGVGKTTLAKIIANQTQSKFIDFSAVTSGIKDIRSVMKEAEGNRQLGEKTLLFIDEIHRFNKAQQDAFLPYVEKGSIILIGATTENPSFEVNSALLSRSKVFVLHPLNHADILELLQKALANPKGFNNQSIEIEDGVLSAIAEYCDGDARVALNTLEMAVLHGKKSDGSIVVNKNDLVQMLNRKSLLYDKNGEEHYNIISALHKAMRNSDVNAAIYWLSRMLESGEDPLFIARRLVRFASEDIGLADNRALEISVAVFQACQFIGMPECDVHLTQAVIYLTLAPKSNAAYLAYRAAKKDALHSVNEPVPLHLRNAPTKLMKELNYGKGYKYAHDTQEKLTMMQTMPDSLIGREYYHPTIQGSEMKFKQRMEEISAWYASHKET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGM6</accession>
    <name>E3EGM6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Nitrite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">nasB</name>
        <name evidence="14" type="ORF">PPSC2_03455</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nitrogen metabolism; nitrate reduction (assimilation).</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369302.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16250"/>
    <dbReference type="EnsemblBacteria" id="ADO54665">
        <property type="protein sequence ID" value="ADO54665"/>
        <property type="gene ID" value="PPSC2_03455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.674"/>
    <dbReference type="eggNOG" id="COG1251">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003291_0_0_9"/>
    <dbReference type="OMA" id="GGWYFRQ"/>
    <dbReference type="OrthoDB" id="1128731at2"/>
    <dbReference type="UniPathway" id="UPA00653"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007419">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005117">
        <property type="entry name" value="NiRdtase/SiRdtase_haem-b_fer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036136">
        <property type="entry name" value="Nit/Sulf_reduc_fer-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012744">
        <property type="entry name" value="Nitri_red_NirB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017121">
        <property type="entry name" value="Nitrite_Rdtase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006066">
        <property type="entry name" value="NO2/SO3_Rdtase_FeS/sirohaem_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041575">
        <property type="entry name" value="Rubredoxin_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04324">
        <property type="entry name" value="Fer2_BFD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03460">
        <property type="entry name" value="NIR_SIR_ferr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18267">
        <property type="entry name" value="Rubredoxin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037149">
        <property type="entry name" value="NirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00397">
        <property type="entry name" value="SIROHAEM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55124">
        <property type="entry name" value="SSF55124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02374">
        <property type="entry name" value="nitri_red_nirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00365">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8" id="KW-0274">FAD</keyword>
    <keyword evidence="4 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0349">Heme</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="12">
        <location>
            <begin position="7"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="Rubredoxin_C" evidence="13">
        <location>
            <begin position="318"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="11">
        <location>
            <begin position="419"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="11">
        <location>
            <begin position="483"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR_ferr" evidence="10">
        <location>
            <begin position="558"/>
            <end position="620"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="9">
        <location>
            <begin position="629"/>
            <end position="764"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR037149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF18267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO54665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="809" mass="88784" checksum="1934EBD098EB31B6" modified="2011-01-11" version="1">MINSKKKLVVIGNGMAGINTVEQILKLTDKYEITVLGSEPHPNYNRIMLSYVLEGSKTIDDIILNDLQWYADQGITLYTGKMVKSIDGEHKKILTEDGLEIDYDVALVATGSQSFILPIPGKELPGVIGFRDIADCSAMLEAAKTYKKAAVIGGGLLGLEAAKGLVNLGMDVTVVHLMEDLMERQLDREASAMLKAELERQGIKFAMQMQTAEVYGQDRVQGLRFSDGSELEADLVVMAVGIKPNIQVAKESDMETNRGIVVDDFMRTSMPDVYAVGECVEHRGICYGLVAPLFEQGSVIAKHLAGVDTEGYAGSVVSTKLKISGVDVFSAGEFITQPEHTAIVAKDEWKRTYKKVLLRDNKIVGTVLFGDVSESASLQKYVRQQTEMTDEIYGQIMGTGCGNHGAKTSSVETMADDEIVCGCNGVTKKAIVEAINENGLTTVDEIKACTGATRSCGGCKPVVEQILQYVLGDSFKTSAKQGICGCTTLSRDEIVEAIKTKGLTTTREVMNVLGWHNDEGCSKCRPALNYYLGMINPDTYENEGDSRFVNERLHANIQKDGTFTVVPRMYGGVTTPEDLKKIADVSLKYNVKVVKVTGGQRLDLIGVRKEDLPKVWEELDMPSGYAYAKSLRTVKTCVGSQFCRFGTQDSMGMGEVLERKFERLDFPAKFKLAVNGCPRNCAESCTKDIGIVGNDGGWEIFIGGNGGIKARLADSLCKVKTDAELIDIVGAVMQFYRETGQYLERTSEWVERIGLEEIQKAVVNDTANRQALVERVEFALQQVEDPWKKIIHDEDTRKNLFEAVTPSIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGY1</accession>
    <name>E3EGY1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Subtilin lantibiotic</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07480</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55541.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016820476.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1564"/>
    <dbReference type="EnsemblBacteria" id="ADO55541">
        <property type="protein sequence ID" value="ADO55541"/>
        <property type="gene ID" value="PPSC2_07480"/>
    </dbReference>
    <dbReference type="GeneID" id="66573442"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1546"/>
    <dbReference type="HOGENOM" id="CLU_3120694_0_0_9"/>
    <dbReference type="OrthoDB" id="2037393at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55541.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="50" mass="5333" checksum="FE22A28A5DEACC1C" modified="2015-05-27" version="2">MKNQFDLDLQVAKNEVAPKEVQPASGLICTPSCATGTLNCQVSLSFCKTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH09</accession>
    <name>E3EH09_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370196.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1592"/>
    <dbReference type="EnsemblBacteria" id="ADO55569">
        <property type="protein sequence ID" value="ADO55569"/>
        <property type="gene ID" value="PPSC2_07610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1574"/>
    <dbReference type="eggNOG" id="ENOG5032M3E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1546132_0_0_9"/>
    <dbReference type="OMA" id="WDLIPEP"/>
    <dbReference type="OrthoDB" id="1414132at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="174" mass="19933" checksum="99881C107779D40C" modified="2011-01-11" version="1">MDIRMYHDLEAQLEETIWALGEEAALTLPLDSSLAEEKAQKAWDLIPEPKHTWGITSVTLHQYVQILNYNSHMQRSVELLNEEIIDLESAGYRIIHAGPYIQMAETLLLQSKPVLAHEYLKKAYSIGNARAFRDQPKLYLEMAKSKVLDEQAILLRFKALDVNAKLLSELKDSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH47</accession>
    <name>E3EH47_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370234.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55607">
        <property type="protein sequence ID" value="ADO55607"/>
        <property type="gene ID" value="PPSC2_07765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1614"/>
    <dbReference type="eggNOG" id="ENOG50306YY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1650467_0_0_9"/>
    <dbReference type="OMA" id="YIEESAY"/>
    <dbReference type="OrthoDB" id="1247249at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="17119" checksum="C08C7D2572D9BC97" modified="2011-01-11" version="1">MTYTLNSVIKGSVNLSTKQIQDWIESYRVGSKYVTTVGKEYFGLNPELVADFKVHNEFSEQREYVAAIEQPVVASKSKEQLADAYSQHKVLIQVECKCGASYIEESAYKRNKWGCEECGDIVFLDNKKGMVETVKGKAWYMTNRYFVER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH75</accession>
    <name>E3EH75_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug transporter MatE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">matE</name>
        <name evidence="2" type="ORF">PPSC2_08940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370484.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21405"/>
    <dbReference type="EnsemblBacteria" id="ADO55866">
        <property type="protein sequence ID" value="ADO55866"/>
        <property type="gene ID" value="PPSC2_08940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1884"/>
    <dbReference type="eggNOG" id="COG0534">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012893_5_0_9"/>
    <dbReference type="OMA" id="RELWGMA"/>
    <dbReference type="OrthoDB" id="1415498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006603">
        <property type="entry name" value="DinF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="170"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="205"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="255"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="295"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="328"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="368"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="397"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="427"/>
            <end position="449"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="471" mass="50909" checksum="F83E1C6FDA09E7AE" modified="2011-01-11" version="1">MSAAEANRNPSLIEGPIAKTLFMFSLPMLFGNILQSLNGTINSIWVGKFLGEAALTAASNGNIIMFFLISSIFGVTMAATILIGQNIGAGDIAETKRVVGTSAVFFLVLAFAIGIIGFLGSPWILHVLNTPAESVDMAITYTRIIFAGMPFLYGYNYIMTVMRGAGDSKTPFYFLLVSVVLDVLLNPLLIFGWGPIPAMGIGGSAAATLIAQGISFVLILIYLYRVKYFLRITSSELHLLRFDWKIIWTLIRKGVPMGLQMIAVSTSAIALMNLINGYGTVAAAAYTAANNLSSYVQMPAMALGAAVSSFAAQNIGAGRWDRVRRTTWIGIVYNFVLTGGAVVLIYVFNRQALLMFLPSTGGALELGMQINLITLWSFVIFGITNVITGVVRSTGSVMVPLLITIISLWGIRIPLAYAFVDKYGLDAVWWSFPVGFTISAVAVIFYYLFGKWKQASMGEGNQGMKLAEDKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHD7</accession>
    <name>E3EHD7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Polymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370701.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22475"/>
    <dbReference type="EnsemblBacteria" id="ADO56090">
        <property type="protein sequence ID" value="ADO56090"/>
        <property type="gene ID" value="PPSC2_10005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2107"/>
    <dbReference type="eggNOG" id="COG1315">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026157_2_1_9"/>
    <dbReference type="OMA" id="TGHVKFK"/>
    <dbReference type="OrthoDB" id="379544at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005646">
        <property type="entry name" value="FapA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38032">
        <property type="entry name" value="PTHR38032"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03961">
        <property type="entry name" value="FapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="469" mass="51200" checksum="036B5EDBF2CABE0E" modified="2011-01-11" version="1">MEKQYALDQFLKVVVSPDKQSAYLEFAKREEGFACSVQELERFLSNQKISYGVITDAIRTFAANPEDHFFGKLLIAQGKQPIHGTDGKINLADIVTGEDAHKPLETVDGRVDYKELTRLRNVKRGQLIAERVDPLPGVPGIAVTGEEIPFLPGKEARFKVGKNVVIHPEGVAMYAAIDGLVTTTEKGKLNVFPVYEVNGDVDYSVGNIDFVGTVVIRGNVLTGFRVRAAGDIRVIGGVEGAEIEADGSVEISGGIIGYHKGFVKAAQNVKCSFIQDGNVIAGADVLVSQSIMHSQIKASNNVICEGTKGLIVGGSVQAGKKVVARTVGNTMSTATNIEVGVLPELRDELTELRARLKQQTDSQDKTNKALTILDQLAAVGQLAPDRMAMRIKLTSTKKSNEQELLETKSRMLEIERTLEDTSRARVEVKNVIYGGSKIVIGRYTKFIKDSLERMAFYYHEGDISMSSYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHG1</accession>
    <name>E3EHG1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ribosome-binding factor A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">rbfA</name>
        <name evidence="2" type="ORF">PPSC2_10105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RbfA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370723.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22575"/>
    <dbReference type="EnsemblBacteria" id="ADO56114">
        <property type="protein sequence ID" value="ADO56114"/>
        <property type="gene ID" value="PPSC2_10105"/>
    </dbReference>
    <dbReference type="GeneID" id="66577894"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2130"/>
    <dbReference type="eggNOG" id="COG0858">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089475_6_3_9"/>
    <dbReference type="OMA" id="GDLQHCK"/>
    <dbReference type="OrthoDB" id="1971380at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030490">
        <property type="term" value="P:maturation of SSU-rRNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00003">
        <property type="entry name" value="RbfA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000238">
        <property type="entry name" value="RbfA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023799">
        <property type="entry name" value="RbfA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020053">
        <property type="entry name" value="Ribosome-bd_factorA_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33515">
        <property type="entry name" value="PTHR33515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02033">
        <property type="entry name" value="RBFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89919">
        <property type="entry name" value="SSF89919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00082">
        <property type="entry name" value="rbfA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01319">
        <property type="entry name" value="RBFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0690">Ribosome biogenesis</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="13100" checksum="4A09A9AC985C0871" modified="2011-01-11" version="1">MAKIRTGRVGEQIKKELSLLIQTELKDPRIGFITVTGVDVTNDLSQAKVYLSVLGDEEQKTSSLKALDKANGYLRSELGKRIRLRHIPELIFKIDESIAYGSRIEKLLSDIDKDEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHV5</accession>
    <name>E3EHV5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Ferrichrome ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fhuB7</name>
        <name evidence="8" type="ORF">PPSC2_11635</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371052.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24010"/>
    <dbReference type="EnsemblBacteria" id="ADO56447">
        <property type="protein sequence ID" value="ADO56447"/>
        <property type="gene ID" value="PPSC2_11635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2460"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_0_9"/>
    <dbReference type="OMA" id="MDQFRFW"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="100"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="127"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="158"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="202"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="284"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="317"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="341" mass="36702" checksum="75CD574CB5E7F540" modified="2011-01-11" version="1">MSTHKERNKKGIFHFVSYMIVGVFLLLVVSAASITFGAAEMSLKLAWGAVFQFDPNITEHQIIHTLRFPRTVADIIVGCSLAVCGAIMQGTTRNPLADSGLIGISSGSTFAIALCMAFLPGRTYGETMLYSCLGAAITTGITYYIASIGKRGMTPQRLVLAGMSISMLFGAFSTFLAIKYEIGQALDYWSAGGTASAKWSELAFISPLFVVGLVCAIALSPSITILSFGEEVASGLGIRANRIKLFSTLIVLILTGLSVIVVGPVGFVGLIVPHIMRYLVGTDYRYIIPASALYGAVFLLAADLLGRMINRPHETPLGIIFALVGVPYFLYLVRKQRREFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHW5</accession>
    <name>E3EHW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">grkA</name>
        <name evidence="3" type="ORF">PPSC2_11685</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371062.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24070"/>
    <dbReference type="EnsemblBacteria" id="ADO56457">
        <property type="protein sequence ID" value="ADO56457"/>
        <property type="gene ID" value="PPSC2_11685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2472"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021639_4_1_9"/>
    <dbReference type="OMA" id="ICLAICM"/>
    <dbReference type="OrthoDB" id="576172at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004995">
        <property type="entry name" value="Spore_Ger"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03323">
        <property type="entry name" value="GerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005690">
        <property type="entry name" value="GerBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="285"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="379"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="410"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="474" mass="52919" checksum="C1749A84ED90E434" modified="2011-01-11" version="1">MKLHTKFSRQLCRNIELICDFMGNSSDFVVREITAGHKHAALFYLDGMTDMQKVQDNVIRPLHDRVSSDEITLPLLKNAILDIGEASFTQNFEDALDQILSGGLLLLLDDTDEGLVISLPGWEERSISDSKTQPVVRGPQEAFTETLRTNTTMVRRRVKDTRVRLTTMKVGEKTKTDISVMYLHGVADPKKVQDMISKLKNMHVEGVLESEYLEECLHDKQLTIFPLFYNSDRPDSIAAGIMEGKIAIFVDGSPFAILAPAVFADFLQSAEDYYQSFVYSSIIRILRYICLAICMLAPAIYVALTTFHQDMIPTVLLLSLSAQREGVPFPAFVEAMIMEVVFEILREAGLRMPRTVGQAVSIVGSIVIGQAAVEANIVSAVMVIVVAITAISSFVIPSYTFAIPIRILRFAFIGIAAMFGVYGLTVGILMLFVHLNGLHSFGVPYLSPFANYKSSEQRDAILRFPYRTKKHRKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI42</accession>
    <name>E3EI42_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MerR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yfmP</name>
        <name evidence="2" type="ORF">PPSC2_03660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369346.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16485"/>
    <dbReference type="EnsemblBacteria" id="ADO54710">
        <property type="protein sequence ID" value="ADO54710"/>
        <property type="gene ID" value="PPSC2_03660"/>
    </dbReference>
    <dbReference type="GeneID" id="66574238"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.720"/>
    <dbReference type="eggNOG" id="COG0789">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060077_2_1_9"/>
    <dbReference type="OMA" id="IMELIRM"/>
    <dbReference type="OrthoDB" id="1748559at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="3"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="18015" checksum="60C4E329C1E7C3B6" modified="2011-01-11" version="1">MVTYKIDEVAKQSGLTKRTIRYYEEIGLLPSPQRSEGNMRLYTQEDVDLLKKIVSAKEVLGFSLQELQRYMSAAEMLKGQREEYRERTEHLQPIERRAMLEDMERTLNEQLELMEGKINSIRMLQTELEELRIRVRERKILLDEELEHDPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI70</accession>
    <name>E3EI70_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-888</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-888</name>
        <name evidence="2" type="ORF">PPSC2_03785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369374.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0754"/>
    <dbReference type="EnsemblBacteria" id="ADO54737">
        <property type="protein sequence ID" value="ADO54737"/>
        <property type="gene ID" value="PPSC2_03785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.747"/>
    <dbReference type="eggNOG" id="ENOG502ZHNI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127640_1_0_9"/>
    <dbReference type="OMA" id="ICQAYEG"/>
    <dbReference type="OrthoDB" id="1566394at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="106"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="15367" checksum="DB105D95739FD80D" modified="2011-01-11" version="1">MDTGSFRFQFRDPQQAAQACETLKEIGYSASTNGDTGLSVHVENQDVLSALEICQAYEGSIIETGVLTYRPGKQSNIGMQNPGYSPEDWIIPAHIINEDWSEAYKNGSSQTFTNTTQEHNVSSDQQPEDDVDGFSGSVHT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI71</accession>
    <name>E3EI71_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YraG1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yraG1</name>
        <name evidence="1" type="ORF">PPSC2_03790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369375.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16605"/>
    <dbReference type="EnsemblBacteria" id="ADO54739">
        <property type="protein sequence ID" value="ADO54739"/>
        <property type="gene ID" value="PPSC2_03790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.748"/>
    <dbReference type="eggNOG" id="ENOG5033AQH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_191305_0_0_9"/>
    <dbReference type="OMA" id="KGLAMHE"/>
    <dbReference type="OrthoDB" id="2088785at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="6919" checksum="F489434DA3E0D7B7" modified="2011-01-11" version="1">MQKLGVHEKLELHELLTFKTTCITKTQTMLPLVSDSNLKNILQQDISGGTQDIQQLRNLLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIA2</accession>
    <name>E3EIA2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yueF</name>
        <name evidence="7" type="ORF">PPSC2_05965</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369847.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1235"/>
    <dbReference type="EnsemblBacteria" id="ADO55215">
        <property type="protein sequence ID" value="ADO55215"/>
        <property type="gene ID" value="PPSC2_05965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1221"/>
    <dbReference type="eggNOG" id="COG0628">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031275_8_2_9"/>
    <dbReference type="OMA" id="VEGFMRG"/>
    <dbReference type="OrthoDB" id="944044at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="30"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="279"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="314"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="361" mass="40938" checksum="F93CABCBDC32176B" modified="2011-01-11" version="1">MLQNNRFFRLTSGIVMLLLIIYLGTKVSFIFSPLVSLVSLLIVPLMLSFFLYYLLRPIVDVMERRKIKRSISILLIYLVIGVLLFLFSWGVWPTLRDQVTNLFENAPKLIKSLVDQLSQWRHNQSLRQVLPPGEDPLSQLSDTLNEAFSTLSDYSVKLVSFVSYFFIVLATFPILLYYMLKEGSKFGPKMLNFFPKKYHKDALEVMEDIDSALSSFIVSRVLINVALGLMMFLGFLIIGLPYALLLAVISIFLNFIPYVGAVAASIPVVIIGFLESPSMALWSLVVVIVAQQIQDNWLSPIVFGKQLDIHPLTVVILLLVGGDLLGILGIILVIPLYMCGKIVIRKVYHLFLERRVEDIME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIA6</accession>
    <name>E3EIA6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cardiolipin synthase</fullName>
            <shortName evidence="7">CL synthase</shortName>
            <ecNumber evidence="7">2.7.8.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">cls1</name>
        <name evidence="9" type="ORF">PPSC2_05980</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>2 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) = a cardiolipin + glycerol</text>
            <dbReference type="Rhea" id="RHEA:31451"/>
            <dbReference type="ChEBI" id="CHEBI:17754"/>
            <dbReference type="ChEBI" id="CHEBI:62237"/>
            <dbReference type="ChEBI" id="CHEBI:64716"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the phospholipase D family. Cardiolipin synthase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.-" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369851.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18945"/>
    <dbReference type="EnsemblBacteria" id="ADO55219">
        <property type="protein sequence ID" value="ADO55219"/>
        <property type="gene ID" value="PPSC2_05980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1225"/>
    <dbReference type="eggNOG" id="COG1502">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038053_1_2_9"/>
    <dbReference type="OMA" id="KRIWITT"/>
    <dbReference type="OrthoDB" id="1881748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008808">
        <property type="term" value="F:cardiolipin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032049">
        <property type="term" value="P:cardiolipin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01916">
        <property type="entry name" value="Cardiolipin_synth_Cls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030874">
        <property type="entry name" value="Cardiolipin_synth_Firmi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022924">
        <property type="entry name" value="Cardiolipin_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025202">
        <property type="entry name" value="PLD-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001736">
        <property type="entry name" value="PLipase_D/transphosphatidylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13091">
        <property type="entry name" value="PLDc_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00155">
        <property type="entry name" value="PLDc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04265">
        <property type="entry name" value="bac_cardiolipin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50035">
        <property type="entry name" value="PLD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="8">
        <location>
            <begin position="213"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="8">
        <location>
            <begin position="389"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="225"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="394"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="396"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="476" mass="55003" checksum="D1DB4BA25A0E4930" modified="2011-01-11" version="1">MLWLLLVLIIFIFQTGTILLFEFRKPSKAVAWLFILFCFPLIGFVVYYFVAQDYQKRKVVRKAGSQLFREFRERLWAQTKVIENVEQMHNPHFKHQERLFNQLIRMSENPLTGCNRTRVLTNGEETFEAMLTAMEQAQHHIHVEFYIFRADEIGKKFQEVMIRKAREGVKVRFIVDGVGSYNLPYSFIRTCNEAGVEFHYFLPPFFATLDRRINYRNHRKIVVVDGTIGFVGGINVGDDYLGKYPKVGFWRDTHLQIEGDGVYFLQNVFLSDWKLASGERLMDVNLFPPHTCTGDEEVQILSSGPDQVWDTIQELCFGALTVAKKRIWITTPYFIPDPGIYEALKLAAVSGIDVKIIIPYQSDSKLVHLASLSYVQDLLEAGVEFYQYRKGFIHAKVVIVDDLLGSVGTANMDMRSFFYNFELTAVLFATSALKRLSADFVEDISNSSKIDLNVFRRRPRSQKIAEILTRMLSPLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJD9</accession>
    <name>E3EJD9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Spermidine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11545</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23910"/>
    <dbReference type="EnsemblBacteria" id="ADO56426">
        <property type="protein sequence ID" value="ADO56426"/>
        <property type="gene ID" value="PPSC2_11545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2441"/>
    <dbReference type="eggNOG" id="COG0421">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1128204_0_0_9"/>
    <dbReference type="OMA" id="NHEITVY"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="29043" checksum="FED4C3BF51AB9D96" modified="2011-01-11" version="1">MKEIIHLDVLHKKLSNNHEITVYETTELYGEKGLFRVMQFSNAAIQGAMDLNHPQRILFEYPRAIIHLMELNDPSFEDVFVIGHGVGTIAGHFADKRFKIAELDAQVVEFSRTFFGYDQDNVVIGDGRRILEKESPDAYDYIILDAFTEQGTPLHLISWEFFKMAKEKLDAEGSLIMNLIGKSEHDHLIHAIHTTLREEFAYVTTFSLPSEGIADIQNIIMIGRDKPIRFQARQMADFHEIALGEGHILRDTDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJE9</accession>
    <name>E3EJE9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar phosphate isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371104.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24195"/>
    <dbReference type="EnsemblBacteria" id="ADO56499">
        <property type="protein sequence ID" value="ADO56499"/>
        <property type="gene ID" value="PPSC2_11875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2515"/>
    <dbReference type="eggNOG" id="COG1082">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_080433_1_0_9"/>
    <dbReference type="OMA" id="GHIAMAH"/>
    <dbReference type="OrthoDB" id="1169054at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="22"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="31690" checksum="FAA4FD095D6C35E2" modified="2011-01-11" version="1">MTVGVLAHLFGKLPYRELAAKVGEAGFTHVQLAPWRAISDVDFNKPGKFNPGLASSIAEEFRKHGVSISVLGCYLHFFVQDEELLRENVERFKELIRYAGLLGAPMVAAEVGRNEDGTPYSERDWRVVKEVVRELADEAEKWGVFVGLEAANDHLVGTAAELATFLEEVPSSHIGVVIDPGNLLKTENLARQDEIIREAFQLLGPRIIAAHAKDRRLSSSGEIETVPPGFGDMNYGLYMELLEQYKPGVHIIMEAAQEHEMAQSKRYIEGHRIAAQKAQQVQTKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJG5</accession>
    <name>E3EJG5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YrkE1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yrkE1</name>
        <name evidence="1" type="ORF">PPSC2_11945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371120.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24265"/>
    <dbReference type="EnsemblBacteria" id="ADO56515">
        <property type="protein sequence ID" value="ADO56515"/>
        <property type="gene ID" value="PPSC2_11945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2530"/>
    <dbReference type="eggNOG" id="COG2210">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094970_1_1_9"/>
    <dbReference type="OMA" id="LQACQMT"/>
    <dbReference type="OrthoDB" id="2045228at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032836">
        <property type="entry name" value="DsrE2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027396">
        <property type="entry name" value="DsrEFH-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13686">
        <property type="entry name" value="DrsE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75169">
        <property type="entry name" value="SSF75169"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="17414" checksum="5F206963D6DDDE9F" modified="2011-01-11" version="1">MSTAKTTIILFSGELDKALAAFIIANGAAAYDHEVTIFFTFWGLNILRKDELMRTHKGMLEKAFGWIMPRGPKKLALSKMNFVGLGPQMIKHVMKKHNALSLPELIELAQEQGIKLVACTMTMDLLGLQQEELIDGVEYAGVAAYLGDASQGQVNLFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJX7</accession>
    <name>E3EJX7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF262 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386410.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0607"/>
    <dbReference type="EnsemblBacteria" id="ADO59996">
        <property type="protein sequence ID" value="ADO59996"/>
        <property type="gene ID" value="PPSC2_28205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5981"/>
    <dbReference type="HOGENOM" id="CLU_100207_0_0_9"/>
    <dbReference type="OrthoDB" id="1779628at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004919">
        <property type="entry name" value="DUF262"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03235">
        <property type="entry name" value="DUF262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF262" evidence="1">
        <location>
            <begin position="39"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="20821" checksum="2F5893B16B0CD34E" modified="2011-01-11" version="1">MKFKDIKPFHDFGNYRIDVPLSSLPNQVSKWEKELGLVLNPDFQRGHIWSEEQQVHYIEFLLREGRSGRDILFNHTKWETYQSKDDGDFVCVDGLQRITAITRFVMNEIKAFGCYFSEYEDPIRLNRFTVKIHVNKLAERKDVLEWYLQLNAGGTVHSQEELERVRGLLERDQIGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK42</accession>
    <name>E3EK42_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Thymidylate kinase</fullName>
            <ecNumber evidence="3">2.7.4.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">dTMP kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tmk</name>
        <name evidence="5" type="ORF">PPSC2_26425</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="5 6">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
            <plasmid evidence="5 6">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>ATP + dTMP = ADP + dTDP</text>
            <dbReference type="Rhea" id="RHEA:13517"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58369"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the thymidylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.9" evidence="3"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59751.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886205.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0360"/>
    <dbReference type="EnsemblBacteria" id="ADO59751">
        <property type="protein sequence ID" value="ADO59751"/>
        <property type="gene ID" value="PPSC2_26425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5570"/>
    <dbReference type="eggNOG" id="COG0125">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049131_0_2_9"/>
    <dbReference type="OrthoDB" id="1585072at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004798">
        <property type="term" value="F:thymidylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006233">
        <property type="term" value="P:dTDP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006235">
        <property type="term" value="P:dTTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00165">
        <property type="entry name" value="Thymidylate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039430">
        <property type="entry name" value="Thymidylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018095">
        <property type="entry name" value="Thymidylate_kin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018094">
        <property type="entry name" value="Thymidylate_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02223">
        <property type="entry name" value="Thymidylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00041">
        <property type="entry name" value="DTMP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01331">
        <property type="entry name" value="THYMIDYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0614">Plasmid</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thymidylate_kin" evidence="4">
        <location>
            <begin position="9"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="11"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59751.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24331" checksum="7FB242A7BF57D48C" modified="2015-05-27" version="2">MKKGFFVSLEGGEGAGKSLVIQAIKDHFAESGKPYLITREPGGIEIAEKIRTIILEPSHTSMDGRTEALLYAAARRQHLVEKVFPAINQGTTVICDRFIDSSLVYQGYARGLGFETILELNQFAIEGCMPDVTIWLDVDPKVGLERISRNNEREVNRLDLESVRFHEKVHMGYQILHAMYPERIHKIDANQTPEDVVKDVIKVILNKTTILDQRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK53</accession>
    <name>E3EK53_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386176.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0372"/>
    <dbReference type="EnsemblBacteria" id="ADO59762">
        <property type="protein sequence ID" value="ADO59762"/>
        <property type="gene ID" value="PPSC2_26355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5555"/>
    <dbReference type="HOGENOM" id="CLU_2509595_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="10221" checksum="C3CF58A5020E75EA" modified="2011-01-11" version="1">MSAILEIFGIEILDCEYTDACEESLQYEDVTFYLKSLSKYDGMIIEVLHDWTFKIWDEKDNVIDSFYLIENNEFREALYKKFPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK59</accession>
    <name>E3EK59_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nucleotidyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386182.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59768">
        <property type="protein sequence ID" value="ADO59768"/>
        <property type="gene ID" value="PPSC2_26325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5545"/>
    <dbReference type="eggNOG" id="COG1746">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052145_0_0_9"/>
    <dbReference type="OMA" id="FYPQGSM"/>
    <dbReference type="OrthoDB" id="796455at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040511">
        <property type="entry name" value="AGS_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18134">
        <property type="entry name" value="AGS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AGS_C" evidence="1">
        <location>
            <begin position="330"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="456" mass="53675" checksum="648F8BB572C009DF" modified="2011-01-11" version="1">MYNLNTKFKTFYHSEVVLPKAEKQKLFNKKNINIKRLKEGLEEYNAENGTNHNSAETPIVQGSVAMSTVVQNEENDYDIDVAIVFDKSNLPEGTTKTKNVIVNALTRKCSQFNVEPEAKTNCVRIVYAENYHIDFAIYRRFTDENGEYKYEHCGSEWRERNPRAITKWFLDQNKDKEYKLREIVRLMKMFSKSRSGWANMPGGLIQSVLADEKFQSYDRTDERFYYTMVSIRDRLAVDKEVYNPTDTTKSLKLVSSDSTKMDNLYNRLNDKLIKLDILFDSDCTYKQAVEAWENFFNHSYWTDLKQEERAQLTKSYSQLSESQVYYDYRETEEYISNMFPVNLKFNLELDCVVSKNDKRVGWLQAMLQRRELLLPEHGLNFRAQTDAPMPYEVYWKVRNRGDIAKQKDCIRGQIKRTDSLYHVEETSFKGDHYVECYIIKSGECVAKGKVDVPIRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK81</accession>
    <name>E3EK81_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385822.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0013"/>
    <dbReference type="EnsemblBacteria" id="ADO59408">
        <property type="protein sequence ID" value="ADO59408"/>
        <property type="gene ID" value="PPSC2_28015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5938"/>
    <dbReference type="HOGENOM" id="CLU_2013028_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="14524" checksum="D76658B30AE535FF" modified="2011-01-11" version="1">MKQNVIRMTQLKNEDRMLLLALDNLVLERHLTRISLKEALETFPGNEVEEFLMQMVMMGTEVEVDLMCIKSKMQKRLEAELDKYFVEKTIEIREARLELAKELDALKTEIFLQNLWGKHTGVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKC0</accession>
    <name>E3EKC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385861.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0053"/>
    <dbReference type="EnsemblBacteria" id="ADO59447">
        <property type="protein sequence ID" value="ADO59447"/>
        <property type="gene ID" value="PPSC2_27825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5897"/>
    <dbReference type="HOGENOM" id="CLU_1137183_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="28437" checksum="5FBBE0401DC7ED24" modified="2011-01-11" version="1">MRFSDIKLNNRIQFEVECDNSALRNVRGIVLAVGEASIILVTDFGELIEIFEDHMLSITSISMPKLVGDAMTELKNHFTEIYELELKLKELRDKEPMLKQNLFDANFLSKFNIHGAKNRLDKSIEQSLTTFYKDTVLYQVSFGSNPNDQIEIYIVVSNQIEYPNLDEDRDVDKIIRVHAPNEREIFEKYFPFASKPKELEKKVVHQGESIYNIQTHYQMNVDVTKENFLGVRQQIVKALMQLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKC6</accession>
    <name>E3EKC6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385867.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59453">
        <property type="protein sequence ID" value="ADO59453"/>
        <property type="gene ID" value="PPSC2_27795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5890"/>
    <dbReference type="HOGENOM" id="CLU_1625463_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="19242" checksum="848386BB0D52A390" modified="2011-01-11" version="1">MVTQQLKRDFIILLEGMTRAGLIKEDIIAMGNLAYFLDRCFAIPVYHRLKQAVAMQIASSDALSKQEIFLLLANNIYEQAKKEKRGENLDYRMERIIEKHVKRTLTHFELLLDDYDFPDWFKEYIPFLEAHEPQVVCDLLMEEIQEDSSYSRLLKPYGYGEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKS5</accession>
    <name>E3EKS5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA topoisomerase</fullName>
            <ecNumber evidence="3">5.6.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Omega-protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Relaxing enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Swivelase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Untwisting enzyme</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_27465</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="14 15">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
            <plasmid evidence="14 15">pSC2</plasmid>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP-independent breakage of single-stranded DNA, followed by passage and rejoining.</text>
            <dbReference type="EC" id="5.6.2.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the type IA topoisomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.1" evidence="3"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385940.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0132"/>
    <dbReference type="EnsemblBacteria" id="ADO59526">
        <property type="protein sequence ID" value="ADO59526"/>
        <property type="gene ID" value="PPSC2_27465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5813"/>
    <dbReference type="eggNOG" id="COG0550">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002929_5_2_9"/>
    <dbReference type="OMA" id="DCENEDC"/>
    <dbReference type="OrthoDB" id="100725at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003917">
        <property type="term" value="F:DNA topoisomerase type I (single strand cut, ATP-independent) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03362">
        <property type="entry name" value="TOPRIM_TopoIA_TopoIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000380">
        <property type="entry name" value="Topo_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003601">
        <property type="entry name" value="Topo_IA_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023406">
        <property type="entry name" value="Topo_IA_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013497">
        <property type="entry name" value="Topo_IA_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013824">
        <property type="entry name" value="Topo_IA_cen_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013825">
        <property type="entry name" value="Topo_IA_cen_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013826">
        <property type="entry name" value="Topo_IA_cen_sub3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023405">
        <property type="entry name" value="Topo_IA_core_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003602">
        <property type="entry name" value="Topo_IA_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034144">
        <property type="entry name" value="TOPRIM_TopoIII"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11390">
        <property type="entry name" value="PTHR11390"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01131">
        <property type="entry name" value="Topoisom_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01751">
        <property type="entry name" value="Toprim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00417">
        <property type="entry name" value="PRTPISMRASEI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00437">
        <property type="entry name" value="TOP1Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00436">
        <property type="entry name" value="TOP1Bc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00493">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56712">
        <property type="entry name" value="SSF56712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00396">
        <property type="entry name" value="TOPOISOMERASE_I_PROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 14" id="KW-0413">Isomerase</keyword>
    <keyword evidence="14" id="KW-0614">Plasmid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Toprim" evidence="13">
        <location>
            <begin position="2"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="TOP1Bc" evidence="11">
        <location>
            <begin position="119"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="TOP1Ac" evidence="12">
        <location>
            <begin position="258"/>
            <end position="544"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00030003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00031985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00032235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00032877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00493"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO59526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="792" mass="90088" checksum="08A6C744B146C3F1" modified="2011-01-11" version="1">MKALLIAEKPDLMKQIRAVYDKFGHADQITFKTFAGHTMTLVEPHEYNPEWEKWNLSTLPMIPESFRYKPSKDKLKMYKELKDEILSKKYDYVINACDPGREGQHIFFSFYHHTGAKLPVKRLWSTDLTENELKRALNNLRDENEPALINMTLASKYRAYFDWLIGLNATRAVTMIANKKINVGRVMTPVLKLIVDRELELRNFVPKDFWEIESEFGGKYKGLYFDHNNENETRFFDKTKAEKMCNKFGETGTVLAVDQRKETKYAPGLHSLQELSNEANRTYGYTMAETLEIAQVLYEKKKILTYPRTNSQFVTKAIAKDFKKHLKPLLSIPELKKIAIEVMGDTSILDAIVKNKKYVDDSKVTDHFAILPTGEDVDLSKLSTKEQNIFLLVAKRLLSIFLPPLVLNKSIILTESNGHRFKSTGSVLVDLGFMKLYDYKGTDNLLPSVKKGEVFNINETKLIQKKTTPPSRYNDESLGKAMEKPGKFIEDEELSSVFKGEKGLGTPATRGGIVEKLVKVLMIDRKGSGKVKSYFATDFGIEIIESLHGKDITMPELTATWEQKLSQVEEGTYDPKMFYSEMIQYTKIMIEDFKHTKVSVSQQSDKEVIGKCPKCSSDVIEGKSFYLCTKYKDTCDFLIAKEVGGAKVSKTEAKKLLSGKETKEMELKFKSGATRKAKLILSPEFKVVLSGSSTGSSVQGGERKVIGTCPKCSKQVVVTKDYYKCEDYKNPCTFIQKRVFCGAEISEDNMKAILNGKQSKELEFTWSSGKTGIAKLEWKDDKISFVFPSKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL03</accession>
    <name>E3EL03_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385979.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59565">
        <property type="protein sequence ID" value="ADO59565"/>
        <property type="gene ID" value="PPSC2_27270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5771"/>
    <dbReference type="HOGENOM" id="CLU_2370209_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168998" evidence="1">
        <location>
            <begin position="24"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="10719" checksum="B354448D3DE1DAD1" modified="2011-01-11" version="1">MKKQCLVLLSLFVLILLAGCSEDYTIDNAKVVSKSHAADRDTYLITLDKNGSRYSYTVVRSEFDLVNEGALVDVKVKHGFFDFPVEIIPSERHPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELD7</accession>
    <name>E3ELD7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386383.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59969">
        <property type="protein sequence ID" value="ADO59969"/>
        <property type="gene ID" value="PPSC2_28335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6010"/>
    <dbReference type="HOGENOM" id="CLU_2438066_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10271" checksum="45D7AC058A2A8992" modified="2011-01-11" version="1">MSKALYAIETVKQTFVRTEFDGEGTEYVFEEPNLHYANIYDSGKEVLDTFLGIEEGNGSIQYKNYEGLLPLKIKSVQFVINDVDVNELIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBP4</accession>
    <name>A0A0D5ZBP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AbrB family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">abrB1</name>
        <name evidence="3" type="ORF">PPSC2_07340</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599574.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20320"/>
    <dbReference type="EnsemblBacteria" id="AKA44200">
        <property type="protein sequence ID" value="AKA44200"/>
        <property type="gene ID" value="PPSC2_07340"/>
    </dbReference>
    <dbReference type="GeneID" id="66573469"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1517"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_158484_0_1_9"/>
    <dbReference type="OrthoDB" id="1942483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="2">
        <location>
            <begin position="5"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="82" mass="9520" checksum="6294FF2E471E841A" modified="2015-05-27" version="1">MKPAGVVRKVDQLGRIVLPKSLRKRYQMNEGDPVEILVQGDHIILERYRPKCVFCGSIEQVNDFKERYICAQCLTEMTQYSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBW5</accession>
    <name>A0A0D5ZBW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Stage V sporulation protein M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_010345573.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44270">
        <property type="protein sequence ID" value="AKA44270"/>
        <property type="gene ID" value="PPSC2_15400"/>
    </dbReference>
    <dbReference type="GeneID" id="66576900"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3290"/>
    <dbReference type="HOGENOM" id="CLU_220710_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012609">
        <property type="entry name" value="Spore_V_M"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08183">
        <property type="entry name" value="SpoV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="26" mass="3048" checksum="16E4E88C0BC810D3" modified="2015-05-27" version="1">MKFYTIKLPKFLGGFVKAILNTFQKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC76</accession>
    <name>A0A0D5ZC76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_00355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13370"/>
    <dbReference type="EnsemblBacteria" id="AKA44171">
        <property type="protein sequence ID" value="AKA44171"/>
        <property type="gene ID" value="PPSC2_00355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.70"/>
    <dbReference type="eggNOG" id="COG1396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_3237040_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="HTH_CROC1"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="43" mass="4714" checksum="61D4A71A9597E333" modified="2015-05-27" version="1">MANRTGISLTVLGAVERGNRTVEADMLNIIAQTLEIEVRELTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-06-17" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCE1</accession>
    <name>A0A0D5ZCE1_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Cellobiose-phosphorylase</fullName>
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        <name evidence="2" type="ORF">PPSC2_11865</name>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PPSC2_11865"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.2512"/>
    <dbReference type="HOGENOM" id="CLU_101362_0_0_9"/>
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    </dbReference>
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    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
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    </dbReference>
    <dbReference type="InterPro" id="IPR010383">
        <property type="entry name" value="Glyco_hydrolase_94"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06165">
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="28360" checksum="2C675E183831216B" modified="2015-05-27" version="1">MKYGFFDDANQEYVIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRYNNIPVDNGGRYFYIYDDGDYWTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAYDDMTNFQRNLNTGEVEIQAKLKYRILSFITRRNTANAAITMLFSLRIVRWRAMIQTVKHFWVSTMDWISPKPSPQGKRLTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCF8</accession>
    <name>A0A0D5ZCF8_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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    <organism evidence="1 2">
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    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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    <dbReference type="EnsemblBacteria" id="AKA44222">
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        <property type="gene ID" value="PPSC2_09120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09120"/>
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    <dbReference type="eggNOG" id="ENOG50332YJ">
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    </dbReference>
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    <dbReference type="OrthoDB" id="2026841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="73" mass="8645" checksum="71B3FCE160ADC928" modified="2015-05-27" version="1">MIMDEELDAYRLSGEKVRVVRDGLESNDVVGIVLAWDDEQVLIRRQNRRVVKLDRSYTYQPFSEPRHNPIELD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCK0</accession>
    <name>A0A0D5ZCK0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PPSC2_15675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3349"/>
    <dbReference type="EnsemblBacteria" id="AKA44272">
        <property type="protein sequence ID" value="AKA44272"/>
        <property type="gene ID" value="PPSC2_15675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3347"/>
    <dbReference type="HOGENOM" id="CLU_2618740_0_0_9"/>
    <dbReference type="OrthoDB" id="1972288at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="8705" checksum="3BD733763561C137" modified="2015-05-27" version="1">MSDYSIMSAGLADFRPGSVQAYKAKVGLCVVTHKNRSNNQVPLHKMKYKIEQGKIKRESRRLAVAGLLESDLKKEGMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCP8</accession>
    <name>A0A0D5ZCP8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PPSC2_25560</name>
    </gene>
    <organism evidence="1 2">
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        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
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        </lineage>
    </organism>
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    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5419"/>
    <dbReference type="HOGENOM" id="CLU_2451846_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="89" mass="10377" checksum="702CD4F64A7D2B9B" modified="2015-05-27" version="1">MNNASIANPALHQFKIQSVGRLSLLIQTWILPQDQFDFSPWEECHSYLSISKMPFWGGFYPKTRVVLSKIYLYTSSSRRGEPAKERRLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCX5</accession>
    <name>A0A0D5ZCX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44377">
        <property type="protein sequence ID" value="AKA44377"/>
        <property type="gene ID" value="PPSC2_27280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5773"/>
    <dbReference type="HOGENOM" id="CLU_2586438_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9615" checksum="503F141218732EA4" modified="2015-05-27" version="1">MTYNERYLNLVDKIQTKESSVLPRFFVKSKVKQYSGCWRRLPRITNNTRWVDSNLSKVELQAGDCLIIIVLVKRWLKDRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4E3</accession>
    <name>E3E4E3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Glycoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sacC5</name>
        <name evidence="9" type="ORF">PPSC2_12725</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00155"/>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56683">
        <property type="protein sequence ID" value="ADO56683"/>
        <property type="gene ID" value="PPSC2_12725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2706"/>
    <dbReference type="eggNOG" id="COG0524">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017889_0_0_9"/>
    <dbReference type="OMA" id="NILWGMK"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018053">
        <property type="entry name" value="Glyco_hydro_32_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00609">
        <property type="entry name" value="GLYCOSYL_HYDROL_F32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00583">
        <property type="entry name" value="PFKB_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="7">
        <location>
            <begin position="2"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32N" evidence="6">
        <location>
            <begin position="332"/>
            <end position="645"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="8">
        <location>
            <begin position="650"/>
            <end position="798"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="822" mass="91943" checksum="E770CBBC4ACC12E6" modified="2011-01-11" version="1">MLDVITIGEVLIDFTPSGRTAGGNEQFECNPGGAPANVAAALSRLGARATLISKVGDDQFGSLLHDTLMNGGIDVSALTFTDEANTTLAFVHLDDNGDRSFSFYRKPGADTYLRTQDVPFDRIENCHALHFGSLSMTHEPARTATRAAVVKAKEAGVLLSFDPNIRFALWESKEEAKRNILWGMKYADILKISEDELHFITGTTDVEKGSLELQQQFGIAGIFVTLAEKGCYYRLVGHDGYVPGFQVEVTDTTGAGDAFLGCLLYKILKAGISLNQLTKQQIIGMLTFANAGGALVTTRKGALQSMPTTDEITQIIETNKQHDDDRFRPGFHFSPHSHWLNDPNGLVYYEGVYHLFYQHHPYSNQWGPMHWGHAVSQDLVHWEHMPIALFPDEHGAIFSGCCVVDWNNSSGLFDGSHGLIALFTHADSCPETGQPRQRQSLAYSSDKGRTWHKYEGNPILDEHDLVDFRDPKVFWHSSSESWIMALVAGDHVRFYRSDNLREWSLSGEFGKSEGSHDGVWECPDLFELPVDDSGHSKWVLIISIGDNPNCPEGSRTQYFIGEFDGNTFINDHPADHILWLDYGRDNYAGVTWSDIAEQDGRRVIIGWMSNWKYANQTPTGAWRGTMTLPRVLSLTSRDEGVVLTQMPVREIEQLRKGTLCWNEVKVTPEVPFTQKTNDVLLEIEADIDIRSEDEVHIKMKSSGQSETIIGYDPVRQWLFIDRSKSGLTDFHPSFACKHGARMVSENGKIKLHIWLDRNAVEVYANEGLVALTDQIFPDAPMDRIEISAKSGEVVVNSFYMHALNSIHIPNGPTEQTSRRVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4M5</accession>
    <name>E3E4M5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Holin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_13865</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the bacteriophage holin family. Cp-1 holin subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371525.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2963"/>
    <dbReference type="EnsemblBacteria" id="ADO56924">
        <property type="protein sequence ID" value="ADO56924"/>
        <property type="gene ID" value="PPSC2_13865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2960"/>
    <dbReference type="eggNOG" id="COG4824">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_125939_3_2_9"/>
    <dbReference type="OMA" id="GMMEITK"/>
    <dbReference type="OrthoDB" id="2035976at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006480">
        <property type="entry name" value="Phage_holin_4_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05105">
        <property type="entry name" value="Phage_holin_4_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01593">
        <property type="entry name" value="holin_tox_secr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="167" mass="17998" checksum="003F5F53A71CBF10" modified="2011-01-11" version="1">MIAQEKFPERRDGGSKVDKWEVFKFSTALGSSAVTYFYGGWSGVLGVLLALVIIDYVTGLFTAGVEGKKGTGPGLKSKIGLIGIARKVFIFAMVSVSHLIDGVLGDSHLFRDVVAYFYMANELLSILENGGRLGAPIPPVIRQAVEVLKSKSGSQEGDREDASKEKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4N3</accession>
    <name>E3E4N3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56932.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886122.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2971"/>
    <dbReference type="EnsemblBacteria" id="ADO56932">
        <property type="protein sequence ID" value="ADO56932"/>
        <property type="gene ID" value="PPSC2_13905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2971"/>
    <dbReference type="eggNOG" id="ENOG502ZZIC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_189150_0_0_9"/>
    <dbReference type="OrthoDB" id="2065581at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56932.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="70" mass="8752" checksum="0C116C10CFFB98F1" modified="2015-05-27" version="2">MEINNKPKDPRKEKLKDFRKGIKSVHYNKECKVARKDDYRLYRTKMKRLMRSEEYEILHSYKRTSGWITW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Q5</accession>
    <name>E3E4Q5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ftsH5</name>
        <name evidence="7" type="ORF">PPSC2_14385</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the peptidase M41 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57033.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905761.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02045"/>
    <dbReference type="EnsemblBacteria" id="ADO57033">
        <property type="protein sequence ID" value="ADO57033"/>
        <property type="gene ID" value="PPSC2_14385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3070"/>
    <dbReference type="eggNOG" id="COG0465">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000688_16_2_9"/>
    <dbReference type="OrthoDB" id="190468at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="SSF140990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="6">
        <location>
            <begin position="103"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57033.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="500" mass="55831" checksum="9D615038948477BE" modified="2015-05-27" version="2">MPRWIKEILIGIVPVTIIFLVFIGVNIIPLLVAGVMLSGLLMLMHARGGLAVGAGQERKRKKNGPDKLTFEEIGGQESAKQELREALDFLNRHDEISKFAIRPLKGVLLTGPPGTGKTLMAKAAAHYTNSVFVAASGSEFVEMYVGVGAGRVRELFREARTRAAKEKKENAIIFIDEIDVIGGKREGGQQREYDQTLNQLLTEMDGIYSADTPRILLIAATNRKEMLDSALTRPGRFDRHIQVDLPDKKGRLHILKIHAKNKPIQEDANLDKIAEESYGFSGAQLESVMNEAAIYAMRQDRQMIAQSHLSMAIDKVMMGEKTDRESTLEEKKRVAIHELGHAIMAEIVRPGSVSQVALSPRGKALGYVRHNPQQEHYLYTKQYLEEQIMISLAGATAEEMYYGGRSTGSSNDFEQALNIVHTMMTSGLTSLGIINMEMVTKEELMRENGEIMNDLHNRTLELLEKHRPVFDNSLDILMKEETLSGDQFRCQFSENALLPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y0</accession>
    <name>E3E4Y0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Biotin carboxyl carrier protein of acetyl-CoA carboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">accB</name>
        <name evidence="4" type="ORF">PPSC2_15110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371780.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02730"/>
    <dbReference type="EnsemblBacteria" id="ADO57188">
        <property type="protein sequence ID" value="ADO57188"/>
        <property type="gene ID" value="PPSC2_15110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3225"/>
    <dbReference type="eggNOG" id="COG0511">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016733_3_0_9"/>
    <dbReference type="OMA" id="IKSPIIG"/>
    <dbReference type="OrthoDB" id="1938042at2"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001249">
        <property type="entry name" value="AcCoA_biotinCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01071">
        <property type="entry name" value="ACOABIOTINCC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00531">
        <property type="entry name" value="BCCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0092">Biotin</keyword>
    <keyword evidence="2" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="3">
        <location>
            <begin position="85"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00017562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU364072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="17638" checksum="23F03780907F74AF" modified="2011-01-11" version="1">MFKLSEIKELIKLVDETSVHELEIENEGTRLMIRKPGKSEIVTVQAPVTAPAYTVAPQAAIPNPQAQSDVGHATAGEPKEYASNLHKIVSPMVGTFYSSSSPDTAPYVSIGSKVGDKTTVCIIEAMKLMNELEAEVKGEIVEILAENGQLVEYGQPLFLVKPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y2</accession>
    <name>E3E4Y2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stage III sporulation protein AG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoIIIAG</name>
        <name evidence="2" type="ORF">PPSC2_15120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371782.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02740"/>
    <dbReference type="EnsemblBacteria" id="ADO57190">
        <property type="protein sequence ID" value="ADO57190"/>
        <property type="gene ID" value="PPSC2_15120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3227"/>
    <dbReference type="eggNOG" id="ENOG50330Z5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071454_2_1_9"/>
    <dbReference type="OMA" id="NVQIKQT"/>
    <dbReference type="OrthoDB" id="1762318at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014195">
        <property type="entry name" value="Spore_III_AG"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02830">
        <property type="entry name" value="spore_III_AG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="23389" checksum="7A197FF47283A3FA" modified="2011-01-11" version="1">MGKWRKKLEQWMGGGGDGAKKFNSFRWLLILGLIGVAIMLFNSFVNVKKVDPENVGREPPGVMKNEPALETTVGEDSSFAGIEKAFEDNMKQMLEQIVGVGTVDVMVTVDSTEEVIVQRNVKDMQEENNETDANGGQRHTTQYTRDGEIVTYESSGGQHTPIVTKKVKPQVRGVLVVAMGAENPTVKQLIVDAVQKGLNVPSYKISVVPRKQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y5</accession>
    <name>E3E4Y5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stage III sporulation protein AD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoIIIAD</name>
        <name evidence="2" type="ORF">PPSC2_15135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371785.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02755"/>
    <dbReference type="EnsemblBacteria" id="ADO57193">
        <property type="protein sequence ID" value="ADO57193"/>
        <property type="gene ID" value="PPSC2_15135"/>
    </dbReference>
    <dbReference type="GeneID" id="66576957"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3230"/>
    <dbReference type="eggNOG" id="ENOG5032SJW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_159353_1_1_9"/>
    <dbReference type="OMA" id="GAQICRD"/>
    <dbReference type="OrthoDB" id="1696273at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
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        <property type="entry name" value="Spore_III_AC/AD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014211">
        <property type="entry name" value="Spore_III_AD"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="13811" checksum="6320E98D3A14AF60" modified="2011-01-11" version="1">MEIIQVVGFALVATVLILVIKEQKPMFAFLIATAAGIVIFLLLIGKIGSVVAVLERLARSSGMDMIYFKTVLKIIGIAYIAEFGAQIVRDAGQDGIASKIELTGKVLIMVLAIPIISIIIDTILKLMPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E599</accession>
    <name>E3E599_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Recombinase RecT</fullName>
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    </protein>
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        <name evidence="2" type="primary">recT3</name>
        <name evidence="2" type="ORF">PPSC2_16390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="rect"/>
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    </dbReference>
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            <begin position="245"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="271"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="298" mass="33124" checksum="66CF1076B4CC15ED" modified="2011-01-11" version="1">MAGQRSNGAILEKKLQNKAAGAKNDAPTPSQTIAAYMDKMKYQIAEAMPKHMSIDRLSRIALTTIRTNPKLLECSMPSLMGAVMQAAQLGLEPGLIGHCYIIPYGTEATFIIGYKGMIDLARRSGNIKSIAAHEVYENDFIELTYGLEEKLQHVPWFLRKDAQPAESGKIIGAYMVAKFNDGGHFIHYMPISEIEEHKKRSKASSKGPWVTDYTEMCKKTVVRSGWKWLPISVEIASAVTQDETVRKDITPNDEPFVFDMPTEPKDGETPQTKDATQPNNTDPQQPADGSGQDELEFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5M5</accession>
    <name>E3E5M5_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57902.1"/>
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    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3951"/>
    <dbReference type="EnsemblBacteria" id="ADO57902">
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        <property type="gene ID" value="PPSC2_18435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3950"/>
    <dbReference type="HOGENOM" id="CLU_1213842_0_0_9"/>
    <dbReference type="OMA" id="ICEDESE"/>
    <dbReference type="OrthoDB" id="1866519at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025678">
        <property type="entry name" value="Imm3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14425">
        <property type="entry name" value="Imm3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="27457" checksum="B8E32E1CF79E89A6" modified="2011-01-11" version="1">MTWIYQELIDSFIEECDEYKLQHQSPSEAISRAFDENYSESYSDDMKKAVLNVISAELKLKQPRIYKLAKENYIRDLKSIDFEKVKKHIQSGQLNEKEFEELYSRRNKVLVDLEKMPVDLCPKARWFYNEIIDKVNTYFVGAESVEDTIDHVMECFEREFRYKDCAKKNVYTTIVENLIRQSERVPEYIIDEIKFGYFDNSQFELTEEESQDLSKRITKVLEDLDIFHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N2</accession>
    <name>E3E5N2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugpA5</name>
        <name evidence="7" type="ORF">PPSC2_18460</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372488.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05675"/>
    <dbReference type="EnsemblBacteria" id="ADO57909">
        <property type="protein sequence ID" value="ADO57909"/>
        <property type="gene ID" value="PPSC2_18460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3957"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_0_9"/>
    <dbReference type="OMA" id="IIATMQV"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="153"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="211"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="259"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="68"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="32500" checksum="DBD51AD8F2DBA572" modified="2011-01-11" version="1">MEKVMSNKLVIALYVLPSLLLLFAVIYVPIVLTGYYGLNQWNGIGPMTFVGLDNYQHLFTDAAFWQSAWHSLLLALFSGISLIGYLVVAMILSGKIKGANLLRKIYLIPMLLSSVAIAQLWLKMYHPTNGVLNSLLASVGVHNPPEWLANPSLVLLALFIPIIWQYAGFYILIYYAGLKNIPETLMEAARIDGASAWQIATRIKLPLLREVINVTIILSIVGSLKYFDLIYVMTDGGPNGASEVMASYMYHQAFRSFDFGYGSATAFALLLICLVATWVIRKVTATSDTIQYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5T7</accession>
    <name>E3E5T7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane-anchored protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_18705</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57964.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886137.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="EnsemblBacteria" id="ADO57964">
        <property type="protein sequence ID" value="ADO57964"/>
        <property type="gene ID" value="PPSC2_18705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4008"/>
    <dbReference type="eggNOG" id="COG4714">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060300_1_1_9"/>
    <dbReference type="OrthoDB" id="898513at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018682">
        <property type="entry name" value="DUF2167_membr"/>
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    <dbReference type="Pfam" id="PF09935">
        <property type="entry name" value="DUF2167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168635" evidence="2">
        <location>
            <begin position="27"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="230"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="265"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57964.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="34145" checksum="71C606D447DD4255" modified="2015-05-27" version="2">MRWSQTILGALLALSLVLLSGGNAWASSSEQLKWVEGGRKVDLGKVATVDLDSSLLFLDAANTAKVSEMNHEKPSGKEIGSIFPKDENQNWEVVFEYYELGHIKDDEKEDIDADAILDSYKEGTEESNKEKAESDRLYVTGWDVEPFYNEATHNLTWSMLAEDGNKEKLINYNVRVLTRQGYISAILVSDPAHLEADKKFLNEKILPKLTVKSGERYEDFNASTDKISEYGLTGLILGGAGLAVAKKVGLLALIIAFFKGAGIKVLVLIGAACAGVFGVIGKFFAKLFRKKKSESLHNETNAQDQSETSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E637</accession>
    <name>E3E637_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Dehydrogenase</fullName>
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        <name evidence="3" type="primary">yrbE</name>
        <name evidence="3" type="ORF">PPSC2_12890</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    <dbReference type="EnsemblBacteria" id="ADO56722">
        <property type="protein sequence ID" value="ADO56722"/>
        <property type="gene ID" value="PPSC2_12890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12890"/>
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        <property type="component" value="Chromosome"/>
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    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="144"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="390" mass="43646" checksum="5889C03AE6943399" modified="2011-01-11" version="1">MSNRLRIGMVGYKFMGKAHSNAYRSLPMFFPDAPLQPEMSVICGRNEQGVQAAARQFGWSESVTNWRDLVKRSDIDLVDINAPSNAHREIVIEAALHGKHLFCEKPLALSLADSRDMLQAAEKAGVNHMIGFNYRFSPAVQLAKQLVESGRLGKIYHFRAFFLQDWIMDPSFPLVWRLQKEVAGSGSHGDLGAHLIDLARFLVGEFHEVIGMSETFIKQRPLATEMSGLSSKRSTEANAPMGEVTVDDATLFLARFAGGALGSFEATRFAAGHRSTNSFEINGSLGSVRFDFERMNELEVYFTQDEEGVQGFRRVLATDPAHKYSEAWWPAGHTIGFEHTFTHEMLEMLSAISEGRQPSPNFHDGVACQAVLEAVERSIKERRWVSIEEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6A1</accession>
    <name>E3E6A1_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Normocyte-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05945"/>
    <dbReference type="EnsemblBacteria" id="ADO57970">
        <property type="protein sequence ID" value="ADO57970"/>
        <property type="gene ID" value="PPSC2_18730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18730"/>
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    <dbReference type="eggNOG" id="ENOG502Z8RQ">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052490_0_0_9"/>
    <dbReference type="OMA" id="PEYKCEG"/>
    <dbReference type="OrthoDB" id="1348345at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="439" mass="50913" checksum="C21B2124864BD72B" modified="2011-01-11" version="1">MKELVQDRLSKMDDLEQRRLLKNMMAGVFMNLVEYQEEMTRQLERRVFEEIENTEEKFDVYVSLTSREDYDPIHEFLYPVLPSDAEEKQVDISRVAEVVGEGGEMPLFTLFLEMETERISALVRSKRIFSGMLVTETGNYPIRFRLEHNRSYILEIEQLYHTFMQNGMPWKTINHPYAYKFVDCVLIGGDGEPAAHEEIHEITISLEEFDIFKKADVFPLWNIERLALKNSGFPIPAMDRVNYEHVLPLRKTGPEHGYLIDGTESDIRYIKRTEEELTIVTPRDKSGEWNVLKVTKPATTKLSRQTYPVLSNRRQDSFLGRYAGKQAVIVRAKAEITRIVNSFEAAQGLELERVDIWGGAGRNDISNLVTKTQTYLLNPFVSDNVRTEDGKQIMRLGFRRGSEDVLPTAPAYILSDLMSFLVSEVQMYFPEYKCEGEWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6A6</accession>
    <name>E3E6A6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Molecular chaperone DnaJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">dnaJ3</name>
        <name evidence="5" type="ORF">PPSC2_18755</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05970"/>
    <dbReference type="EnsemblBacteria" id="ADO57975">
        <property type="protein sequence ID" value="ADO57975"/>
        <property type="gene ID" value="PPSC2_18755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4019"/>
    <dbReference type="eggNOG" id="COG0484">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017633_12_6_9"/>
    <dbReference type="OMA" id="FFGFHPK"/>
    <dbReference type="OrthoDB" id="1520143at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="J" evidence="4">
        <location>
            <begin position="3"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="71"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="16774" checksum="F8E50D02FAE9FE85" modified="2011-01-11" version="1">MTNYYELLGVGRDASEAEIKQAYRKLAKKYHPDTNQGSEEATRKFKLIHEAYNTLRDEALRQAYDAELIRKATGTSGEQQEKARGAAAPSEGTRRAAKGFNPADIGTDFEQFFGFHPKTKEGSPGKKMKKSGDPTDTSAMFNQFFGIRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6C2</accession>
    <name>E3E6C2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Cysteine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cydD1</name>
        <name evidence="10" type="ORF">PPSC2_18825</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_18825"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.4035"/>
    <dbReference type="eggNOG" id="COG4988">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_9_9"/>
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    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
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        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
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        <location>
            <begin position="16"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="137"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="240"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="268"/>
            <end position="287"/>
        </location>
    </feature>
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        <location>
            <begin position="18"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="330"/>
            <end position="562"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="362"/>
            <end position="369"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
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            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO57991.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="577" mass="63711" checksum="5AE389E322A02FA1" modified="2015-05-27" version="2">MVDSRLLGLVEHSRKYIILGVLVQWIGLLGSIAAVLSMAFVMQQAWEGQVSRKLILFMTVIVMAAIAVRFLSNYAASMLSYRASINAKKTLRSQIYGKLLKLGPSYTDHTSTSGVIQVAVEGVEQLETYFGRYMPQLFYSLLAPVTLFITLSFVSFKAAIILLICVPLIPVSIIVIMRMAKKLFRKYWGSYVNLGHSFLENVQGLTTLKIYGTDQDKHQEMNTAAEDFRKMAMKVLTMQLNSVAVMDLIAFGGAAAGVLVAVSEYSSGHIGLAGALIIVLLSAEFFIPLRLLGSYFHIAMNGMAASDKIFQMLSTEDFIQGQQSIEATDIQLERVNFAYDERDTLRNISMNIPQGSFVSIVGESGSGKSTVAGLIVGHHEGYQGSLKIGGTELTSITEESRMRHMTWIGFNSYIFKGTVEANLRMGNEHADEQQMLEALRQVKLYDFILSEGGLEAEIEEQGANLSGGQRQRLALARALLHDSHVYIFDEATSNIDVESEEGIMEVIHALAGQKTVILISHRLENVIQSDCIVVLQNGLVAESGTHQELLSQQGHYAEMYLSQHRMEQFVKGGAVYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G6</accession>
    <name>E3E6G6_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PPSC2_19030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58035.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06240"/>
    <dbReference type="EnsemblBacteria" id="ADO58035">
        <property type="protein sequence ID" value="ADO58035"/>
        <property type="gene ID" value="PPSC2_19030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4078"/>
    <dbReference type="eggNOG" id="ENOG5032ZSJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_198029_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58035.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="76" mass="8577" checksum="335CA47B9AC88449" modified="2015-05-27" version="2">MDRVSLLRCPNCNSKDIGKIGSHQFYCWGCFIELQVNGEKMSVYQVEEDGTLSSLDDLFFGDEMAQQDLPQIHASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6J0</accession>
    <name>E3E6J0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ggaB</name>
        <name evidence="2" type="ORF">PPSC2_20110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4300"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
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        <property type="protein sequence ID" value="ADO58250"/>
        <property type="gene ID" value="PPSC2_20110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4286"/>
    <dbReference type="eggNOG" id="COG1215">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025996_0_4_9"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="6"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="27913" checksum="4382B78D41734C1E" modified="2011-01-11" version="1">MRPSVTIVIPFYNCRYVDQAVQSALEQTYGPLEIIVVDDGSTTHTEMLHPYRKYIYYLGKLNGGTASALNHGIRHANGEYIAWLSSDDTFHKDKINNQVSFMLEQGAHISHTNFNTINEYSQITRYQAGPVLPSIQEFYRFFLKGNPVNGCTVMFKKELFTQIGLFNELLTYTHDLDMWYRVILAGYEFPFLNELLVNYRWHDEMGTNKHRHVIEQEYLITQARYRTSLTELLNRFAAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6K7</accession>
    <name>E3E6K7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58267.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324685.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07440"/>
    <dbReference type="EnsemblBacteria" id="ADO58267">
        <property type="protein sequence ID" value="ADO58267"/>
        <property type="gene ID" value="PPSC2_20190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4301"/>
    <dbReference type="eggNOG" id="COG0463">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049288_0_0_9"/>
    <dbReference type="OrthoDB" id="1445278at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="72"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58267.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="34066" checksum="628AC37E66354570" modified="2015-05-27" version="2">MKKRGRAGFKINRRRHSRAYYHSKMWLPFRMPNMDKKPITPDKSEVLDTERGTQIGGARPSEPPSVGKVLVSVIIPAMNEQRTIGAVIREARHVHPQTEVIVVENGSHDRTAKVAAAAGARVLSFPEPLGHDVGRRIGAEAASGQILLFLDGDIVIPCVRLRPFIQAVCAGADVVLNDYHGPVNRTPIHPVVEAKHVLNILSNRADLGGASMTGIPHAISQKALKEIGLKSLEKPPLFQVMSIVSGLRVVTVHGIAVGRMNATRKKQNGKDPLAGVIVQDHLDAIAWLTSRLGARAGYTDLERKRIRDEVKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6S1</accession>
    <name>E3E6S1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rsbW</name>
        <name evidence="2" type="ORF">PPSC2_21220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373042.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08450"/>
    <dbReference type="EnsemblBacteria" id="ADO58473">
        <property type="protein sequence ID" value="ADO58473"/>
        <property type="gene ID" value="PPSC2_21220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4510"/>
    <dbReference type="eggNOG" id="COG2172">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090336_11_1_9"/>
    <dbReference type="OMA" id="KPEYVGV"/>
    <dbReference type="OrthoDB" id="1832160at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13581">
        <property type="entry name" value="HATPase_c_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HATPase_c" evidence="1">
        <location>
            <begin position="13"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="16619" checksum="4CA5FBEC191C31C0" modified="2011-01-11" version="1">MNAQIQKVVLNLPATADFVDIVRLNLYGIAAKMGFSYEDIEDMKVAVSEACNNSVLYAYGHEGGVVEVTFEFDEASLSIRVKDEGESFERVEDPTRIASLHDKELNDAQIGGLGFYLMQALMDDVHILNETGKGTEVVLVKRLTRSEETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6S6</accession>
    <name>E3E6S6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rsbU</name>
        <name evidence="3" type="ORF">PPSC2_21245</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373047.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08475"/>
    <dbReference type="EnsemblBacteria" id="ADO58478">
        <property type="protein sequence ID" value="ADO58478"/>
        <property type="gene ID" value="PPSC2_21245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4515"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2208">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_43_7_9"/>
    <dbReference type="OMA" id="GLINCKL"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07228">
        <property type="entry name" value="SpoIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="2"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="44925" checksum="8920957E42462E59" modified="2011-01-11" version="1">MRILIVDDNPTNVIIIREILKKENYRDVISASSAAEMLEHLGIGDRTISLRPRPSDIDLVLLDMMMPEMDGIEACSIVQEYEHLKDIPIIMVTAVGDSKKLAEALDVGAVDYVTKPINKVELMARIRSALRLKQEKDWHKDRDQRIQDELKLAAMVQQAVLSPAIQDPMLQANALYQPSFELAGDLYSWYPLGEGRYAIILLDMMGHGISSSLFCMFIASVLKDTVTTFVEPEKVIQELNRRFNQLDLGKQLVQYYFTAIYMVIDTRSRRIDYVNAGHPPGLLFNQDGSITKLDRACSPVGLFDKIDAEMHTIYYEGTGHIALYTDGLLEAVEGEYEEQLEYLTACLRKYEEWNEEAMLDAFFRNDGGLQDRDDDKCLIWISLKEGESLHENQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Y4</accession>
    <name>E3E6Y4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 7">30S ribosomal protein S9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">rpsI</name>
        <name evidence="8" type="ORF">PPSC2_22275</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373250.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09740"/>
    <dbReference type="EnsemblBacteria" id="ADO58686">
        <property type="protein sequence ID" value="ADO58686"/>
        <property type="gene ID" value="PPSC2_22275"/>
    </dbReference>
    <dbReference type="GeneID" id="66575612"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4724"/>
    <dbReference type="eggNOG" id="COG0103">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046483_2_1_9"/>
    <dbReference type="OMA" id="QWKINGR"/>
    <dbReference type="OrthoDB" id="1766414at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00532_B">
        <property type="entry name" value="Ribosomal_S9_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000754">
        <property type="entry name" value="Ribosomal_S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023035">
        <property type="entry name" value="Ribosomal_S9_bac/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020574">
        <property type="entry name" value="Ribosomal_S9_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21569">
        <property type="entry name" value="PTHR21569"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00380">
        <property type="entry name" value="Ribosomal_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00360">
        <property type="entry name" value="RIBOSOMAL_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="14540" checksum="FBC85CD6D62AAFC9" modified="2011-01-11" version="1">MAQVQYYGTGRRKHSVARVRLVPGEGRIVINKRDINEYFGLETLKLIVKQPLNLTETLGSYDVLVIAHGGGISGQAGAIRHGISRALLKADPEFRPALKKAGFLTRDPRMKERKKYGLKAARRAPQFSKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E742</accession>
    <name>E3E742_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Cysteine--tRNA ligase</fullName>
            <ecNumber evidence="11">6.1.1.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Cysteinyl-tRNA synthetase</fullName>
            <shortName evidence="11">CysRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">cysS</name>
        <name evidence="13" type="ORF">PPSC2_22535</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys)</text>
            <dbReference type="Rhea" id="RHEA:17773"/>
            <dbReference type="Rhea" id="RHEA-COMP:9661"/>
            <dbReference type="Rhea" id="RHEA-COMP:9679"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78517"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="11">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 11">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.16" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373283.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10000"/>
    <dbReference type="EnsemblBacteria" id="ADO58744">
        <property type="protein sequence ID" value="ADO58744"/>
        <property type="gene ID" value="PPSC2_22535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4777"/>
    <dbReference type="eggNOG" id="COG0215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013528_0_1_9"/>
    <dbReference type="OMA" id="AKYWMHN"/>
    <dbReference type="OrthoDB" id="952207at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004817">
        <property type="term" value="F:cysteine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006423">
        <property type="term" value="P:cysteinyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00672">
        <property type="entry name" value="CysRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00041">
        <property type="entry name" value="Cys_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015803">
        <property type="entry name" value="Cys-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015273">
        <property type="entry name" value="Cys-tRNA-synt_Ia_DALR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024909">
        <property type="entry name" value="Cys-tRNA/MSH_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032678">
        <property type="entry name" value="tRNA-synt_1_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890">
        <property type="entry name" value="PTHR10890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09190">
        <property type="entry name" value="DALR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01406">
        <property type="entry name" value="tRNA-synt_1e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00983">
        <property type="entry name" value="TRNASYNTHCYS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00840">
        <property type="entry name" value="DALR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00435">
        <property type="entry name" value="cysS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11 13" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="DALR_2" evidence="12">
        <location>
            <begin position="354"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="11">
        <location>
            <begin position="31"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="11">
        <location>
            <begin position="266"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="29"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="238"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="467" mass="53534" checksum="1CC78E1664AE9738" modified="2011-01-11" version="1">MSLQIYNTMTRSREPFVPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGYDVNYVVNFTDVDDKLIRKARELNMEVPAVAEKFIAAYHEDLAGLNVPAASINPRVTESMDLIIDFIKDLVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVDERKENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECAQSEVITGKPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRARHKPEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLAIALKGNEEVSAELQMKLDGILQQFGEKMDDDFNTPDAITAVFEWVSEANLLLQRDVVNQAELQAVLHTFHSMNTVLRIYSEPSEELLDGEVEQLIAERVEARKTKNWGRADEIRDLLATKGIVLEDTAQGMRWRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E791</accession>
    <name>E3E791_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">NADH oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_23485</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373482.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10975"/>
    <dbReference type="EnsemblBacteria" id="ADO58946">
        <property type="protein sequence ID" value="ADO58946"/>
        <property type="gene ID" value="PPSC2_23485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4973"/>
    <dbReference type="eggNOG" id="COG0446">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003291_1_0_9"/>
    <dbReference type="OMA" id="LMTITWE"/>
    <dbReference type="OrthoDB" id="1149616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="3">
        <location>
            <begin position="1"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="2">
        <location>
            <begin position="334"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="453" mass="49642" checksum="D56C7A5918AE1DC0" modified="2011-01-11" version="1">MKVAVIGCTHAGTAAIVNTAKCYPDAEITVYERNDNISFLSCGIALYVGGVVKDPHGLFYSSPDQLADMGVVTKMLHEVTSVDTAGKTLHARNLQTGEEFTDTFDKLIVTTGSWPIIPKLEGIELDHILLCKNYNHSNEIIEKAQHVQNITVVGAGYIGVELVEAFQMNGKNVTLIDSADRILNKYLDHEFTDRIENSLREHGIKLVLGETVSRFEGTNGKVSKVVTSKGEYETELVILCIGFRPQTDLLKGQVDMLPNGAIIVDNYMQSSCPDVFAAGDSCAIRYNPTGKTAYIPLATNAVRMGTLVARNLVQPTIAYMGTQGTSGIKIYEDNIAGTGMTEAAATDEGMTVEAVTIEDSYRPEFMPTSEKVLLKVVYEQETRRIVGAQIMSKVDLTQSINTLSVAIQNHMTIDQLAFVDFFFQPHYNKPWNFLNAAGLQALPTISERNPVTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7M7</accession>
    <name>E3E7M7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glutamine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnQ9</name>
        <name evidence="6" type="ORF">PPSC2_13440</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371435.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01125"/>
    <dbReference type="EnsemblBacteria" id="ADO56832">
        <property type="protein sequence ID" value="ADO56832"/>
        <property type="gene ID" value="PPSC2_13440"/>
    </dbReference>
    <dbReference type="GeneID" id="66577292"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2862"/>
    <dbReference type="eggNOG" id="COG1126">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="APIWVRR"/>
    <dbReference type="OrthoDB" id="1191583at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="240" mass="26610" checksum="799864E93777442C" modified="2011-01-11" version="1">MITVKQLRKSFGKNEILKGIDIDIAKGEVVVIIGPSGSGKSTFLRCMNLLEQPTEGEILFEGEPITARGHNINATREKMGMVFQHFNLFPHKTILQNLTLAPTQVKKQSGKEAEKIALELLRTVGLEDKKNTYPNQLSGGQKQRIAIARALAMQPHVMLFDEPTSALDPEMVGEVLDVMKKLAEGGMTMVIVTHEMGFAREVGDRIIFMDNGQIIEQGTPEQVFGTPSHDRTRDFLAKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7U1</accession>
    <name>E3E7U1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rumA1</name>
        <name evidence="5" type="ORF">PPSC2_14100</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371574.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01755"/>
    <dbReference type="EnsemblBacteria" id="ADO56974">
        <property type="protein sequence ID" value="ADO56974"/>
        <property type="gene ID" value="PPSC2_14100"/>
    </dbReference>
    <dbReference type="GeneID" id="66577159"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3010"/>
    <dbReference type="eggNOG" id="COG1092">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051804_1_0_9"/>
    <dbReference type="OMA" id="PEQAVNW"/>
    <dbReference type="OrthoDB" id="468283at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019614">
        <property type="entry name" value="SAM-dep_methyl-trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10672">
        <property type="entry name" value="Methyltrans_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltrans_SAM" evidence="4">
        <location>
            <begin position="66"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="287" mass="32319" checksum="02230D769C3EDCD4" modified="2011-01-11" version="1">MYVAQEWKDYEVMDTGGGEKLERWGNIVLRRPDPQIIWPLTQETAEWRNVHGHYHRSSSGGGQWDMKKPIPERWTISYGPLKFHIKPTSFKHTGLFPEQAANWSWMMDKIKGAGRPISVLNLFAYTGGATTAAAYAGASVVHVDAAKGMVQWAKENVQLSGLADRPVRFITDDVFKFVQREQRRGNRYDAIIMDPPSYGRGPNGETWKLEESLYPFLESCMSIISDQPLFMLINSYTTGISPTVLRNMLSMTMQQKYGGQISAGEIGLPITRSGLNLPCGILGRWEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E817</accession>
    <name>E3E817_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Riboflavin synthase subunit alpha</fullName>
            <ecNumber evidence="4">2.5.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ribB</name>
        <name evidence="4" type="ORF">PPSC2_14840</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.9" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371726.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02475"/>
    <dbReference type="EnsemblBacteria" id="ADO57130">
        <property type="protein sequence ID" value="ADO57130"/>
        <property type="gene ID" value="PPSC2_14840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3167"/>
    <dbReference type="eggNOG" id="COG0307">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034388_1_1_9"/>
    <dbReference type="OMA" id="HFVTGHV"/>
    <dbReference type="OrthoDB" id="1276859at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004746">
        <property type="term" value="F:riboflavin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00402">
        <property type="entry name" value="Riboflavin_synthase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023366">
        <property type="entry name" value="ATP_synth_asu-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001783">
        <property type="entry name" value="Lumazine-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026017">
        <property type="entry name" value="Lumazine-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21098">
        <property type="entry name" value="PTHR21098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00677">
        <property type="entry name" value="Lum_binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000498">
        <property type="entry name" value="Riboflavin_syn_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00187">
        <property type="entry name" value="ribE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51177">
        <property type="entry name" value="LUMAZINE_BIND"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="repeat" description="Lumazine-binding" evidence="2">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="Lumazine-binding" evidence="3">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="Lumazine-binding" evidence="3">
        <location>
            <begin position="97"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="repeat" description="Lumazine-binding" evidence="2">
        <location>
            <begin position="97"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="23737" checksum="8A20ACA7A772B3CD" modified="2011-01-11" version="1">MFTGLVEEVGRIQSISKSGEAMVLGISGSVVLGDLKIGDSVSVNGVCLTAIQIGTKDFKVDVMPETFRSSNLRELRSGSRVNLERAMAANGRFGGHIVQGHVDGTGTIRGVTSDQNAVVFEVEPSDQALFKYVLLKGSITIDGISLTVAQRTRDSFAVSIIPHTLAETALQAKREGDTVNIECDILGKYVEQLLHYRGSVPMERADQAPLSLDYLAKHGFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8C9</accession>
    <name>E3E8C9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Major facilitator transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">nasA</name>
        <name evidence="11" type="ORF">PPSC2_15755</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371907.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03450"/>
    <dbReference type="EnsemblBacteria" id="ADO57321">
        <property type="protein sequence ID" value="ADO57321"/>
        <property type="gene ID" value="PPSC2_15755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3362"/>
    <dbReference type="eggNOG" id="COG2223">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_14_1_9"/>
    <dbReference type="OMA" id="IPCFMFA"/>
    <dbReference type="OrthoDB" id="1217595at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015112">
        <property type="term" value="F:nitrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17341">
        <property type="entry name" value="MFS_NRT2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044772">
        <property type="entry name" value="NO3_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23515">
        <property type="entry name" value="PTHR23515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="52"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="83"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="168"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="245"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="278"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="332"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="364"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="10">
        <location>
            <begin position="14"/>
            <end position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="43930" checksum="44111B4AD0ABE2CF" modified="2011-01-11" version="1">MKKKSFWQSGHKPTLLGSFLYFDISFMIWGMIGPLVVVIANDYPMDPVQKANLVALPILSGSLLRLVLGFMSDYIGPKLTGQIGMLVTIIPLLLGWLWVDSLEQLYAVALLLGVAGASFAAALPLAGQWYPKEHQGLAMGIAGAGNSGTVLATLFANRIAQHFGSWEVVFGLAIIPIFIVFVLFSIFARNSPHRPAPKSLSQYASVLKQKDAWVFCAFYCVTFGGFVGLSNYLTIFFNTQYGLSAVHAADFATVCVIAGSFFRPVGGFLSDRIGGSRMLMYLYAGAGIMLASIAFLPPLAVVVVLLFVGMMCLGAGNGSVFQLVPQRFGNEIGLMTGIVGAAGGIGGYFLPLILGHLYKLTGSYMPGFICLSLITFCALVLVIIMQLKWRNSWMRRSAPVANEAVRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9A2</accession>
    <name>E3E9A2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycerol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gldA3</name>
        <name evidence="8" type="ORF">PPSC2_15995</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371961.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03685"/>
    <dbReference type="EnsemblBacteria" id="ADO57375">
        <property type="protein sequence ID" value="ADO57375"/>
        <property type="gene ID" value="PPSC2_15995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3417"/>
    <dbReference type="eggNOG" id="COG0371">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044754_1_0_9"/>
    <dbReference type="OMA" id="VICDEFI"/>
    <dbReference type="OrthoDB" id="717704at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016205">
        <property type="entry name" value="Glycerol_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43616">
        <property type="entry name" value="PTHR43616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000112">
        <property type="entry name" value="Glycerol_dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00913">
        <property type="entry name" value="ADH_IRON_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00060">
        <property type="entry name" value="ADH_IRON_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Fe-ADH" evidence="7">
        <location>
            <begin position="11"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="97"/>
            <end position="101"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="119"/>
            <end position="122"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="39654" checksum="D977FFC0A37EDFDE" modified="2011-01-11" version="1">MANVVRSVTSPKKFISGQNLLSSLNDYIKDYGDKAYVICDEFILERAQKEAGASIEAAGNQVVFEKFQYECTKEEIDRNRELVRKHGSNIIIGIGGGKTLDTAKATAYYEKLPVVIFPTIASTDAPCTALAVIYKKDGSFDEYLFLPTNPDVVLADTGILAAAPARFFAAGIGDALATYFEARACYQANGDNLVLNKPSTTGLGLARLCYDTLLENAVKAKRAVDRKVYTRAVEDTIEATIYLSGVGAESGGLAAAHAIHNGMTAVPSLHKAQHGEKVTFGLLTQLVLENAPKEELETVIKLVKDVGLPLTLRDLGVEEFVEAEWRQVAEDACAANDTMVNMPFPVSPDDVYNAIIAANAIAESYQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9F3</accession>
    <name>E3E9F3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">Zinc metalloprotease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">ywhC</name>
        <name evidence="16" type="ORF">PPSC2_16965</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peptidase M50B family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372166.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04300"/>
    <dbReference type="MEROPS" id="M50.A05"/>
    <dbReference type="EnsemblBacteria" id="ADO57584">
        <property type="protein sequence ID" value="ADO57584"/>
        <property type="gene ID" value="PPSC2_16965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3623"/>
    <dbReference type="eggNOG" id="COG1994">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086979_1_0_9"/>
    <dbReference type="OMA" id="HEIMHGL"/>
    <dbReference type="OrthoDB" id="1401629at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="S2P-M50_like_1"/>
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        <property type="entry name" value="Peptidase_M50"/>
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    </dbReference>
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    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
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    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 16" id="KW-0482">Metalloprotease</keyword>
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    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="56"/>
            <end position="78"/>
        </location>
    </feature>
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        <location>
            <begin position="90"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="134"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="209"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M50" evidence="15">
        <location>
            <begin position="128"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007931"/>
        </source>
    </evidence>
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        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
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    </evidence>
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        <source>
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        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO57584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="26070" checksum="29E2A9570707AD2B" modified="2011-01-11" version="1">MDFLQSIFRVNLNVLPFYLLAVIISFTVHEFAHAYYANKFGDPTAKLLGRVTLNPAVHIDLLGTLLLLIGGFGWAKPVPVNRDNFSRPRLMGIIVSAAGPLSNLLLAFVTTLIYAVLLHFQVLPGMENQRVAQAIYLFINALINLNLFLFIFNLIPLPPLDGYRIVEDVAPTPVRRKLQQFEQWSIFIFLLILIIPQVRAVTIEPLYTLSQMIYIQFLQFSFYITGLFGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J0</accession>
    <name>E3E9J0_PAEPS</name>
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        <submittedName>
            <fullName evidence="4">RNA-binding protein</fullName>
        </submittedName>
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        <name evidence="4" type="ORF">PPSC2_17135</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
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        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS51295"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO57621.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="98" mass="11287" checksum="F1331531BC791CEB" modified="2011-01-11" version="1">MLTGKQKRYLRSMAHHLDPVFQVGKNGTNEHLMRHINDAIEKRELMKVQILNNCLDDKHEIAEELAAETGSELVQLIGSTIILYKESRDHKQIELPRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9M6</accession>
    <name>E3E9M6_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
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    </protein>
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        <name evidence="2" type="ORF">PPSC2_18055</name>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57816.1"/>
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    </dbReference>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_18055"/>
    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="DUF6097"/>
    </dbReference>
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        <property type="entry name" value="DUF6097"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="156" mass="17768" checksum="7B839056ED0C2319" modified="2011-01-11" version="1">MNVLGQLGSAIQSSLFIQSELKKAHALIQKHDLPVEQVEDDFHKQIILLEQYAGTRIFQQGLARYKVINAMLLIISVIILLAAVIVATVEYLQPERHLLQVLVNAMFDYWVPSITILSVAFVGVIVLAIVRNVYARRLHTRVLDRSWQAIFQHVDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA14</accession>
    <name>E3EA14_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcription antiterminator BglG</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="primary">arbG7</name>
        <name evidence="2" type="ORF">PPSC2_19630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4197"/>
    <dbReference type="EnsemblBacteria" id="ADO58147">
        <property type="protein sequence ID" value="ADO58147"/>
        <property type="gene ID" value="PPSC2_19630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4186"/>
    <dbReference type="eggNOG" id="COG3711">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078802_0_0_9"/>
    <dbReference type="OMA" id="HLRYFAQ"/>
    <dbReference type="OrthoDB" id="1193348at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004341">
        <property type="entry name" value="CAT_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036650">
        <property type="entry name" value="CAT_RNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011608">
        <property type="entry name" value="PRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036634">
        <property type="entry name" value="PRD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001550">
        <property type="entry name" value="Transcrpt_antitermin_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03123">
        <property type="entry name" value="CAT_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00874">
        <property type="entry name" value="PRD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01061">
        <property type="entry name" value="CAT_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50151">
        <property type="entry name" value="SSF50151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63520">
        <property type="entry name" value="SSF63520"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00654">
        <property type="entry name" value="PRD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="65"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="171"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="282" mass="32609" checksum="D61CDF8FA26AC9B0" modified="2011-01-11" version="1">MIIEKVLNNNVLLTKNDKGKEVIVMGRGISFKKVAGDPVDDHKIDKIFMLNENEFTARLTELLNDIPVSHLEVVNEIVTHAAEVLDTELSDNIYLTLTDHIHFAIQREEKGLALKNAMLYEIKRFYKKEFAVGLDALQKIENTLGVKLGEDEAGFIALHMVNARIDGNEMKATLKMTEIVQHILNIITYHYGIVLDESSFSYSRFLTHLQYFAMRVIRKEVIHSGEEFLYNQVKQTYTEAFACTQKINEYLEKTYDQYLSKDEYVYLTIHIHRVTERNNISG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA83</accession>
    <name>E3EA83_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YutD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yutD</name>
        <name evidence="2" type="ORF">PPSC2_20665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372944.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4425"/>
    <dbReference type="EnsemblBacteria" id="ADO58375">
        <property type="protein sequence ID" value="ADO58375"/>
        <property type="gene ID" value="PPSC2_20665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4408"/>
    <dbReference type="eggNOG" id="COG4470">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_914802_0_0_9"/>
    <dbReference type="OMA" id="GYKRDAY"/>
    <dbReference type="OrthoDB" id="1126357at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.4.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009370">
        <property type="entry name" value="YutD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038141">
        <property type="entry name" value="YutD-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06265">
        <property type="entry name" value="DUF1027"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="115"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="124"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="152"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="287" mass="33628" checksum="39D9B070716B8A94" modified="2011-01-11" version="1">MFQIGGKNYEVLQDHKNGWNPEAFRDRYSEVLDRYDYIIGDWGYNQLRLKGFYREGHPKANKDTSIVVLDDYINEYCNFGCAYFVLQKSREVENKNGTSDDFVPPDIQQLVDAQREQAGTLDSEERQEVSQPSAGQTEWPQPQQDSAATEESRVEQPSEAREPRELQRREPKDAQEVRERQPREARESRPSREGREGNRQREARDSRQPREPREAKDGRSSGEGQQAREPRRQRNPQGNFDKKESRGPRYDRQPKENREGRQVRVSREPEGQRQKNKTFTSPQQNGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAG0</accession>
    <name>E3EAG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">metN3</name>
        <name evidence="5" type="ORF">PPSC2_21700</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373145.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4631"/>
    <dbReference type="EnsemblBacteria" id="ADO58578">
        <property type="protein sequence ID" value="ADO58578"/>
        <property type="gene ID" value="PPSC2_21700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4618"/>
    <dbReference type="eggNOG" id="COG1136">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="KKYYGQG"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="24449" checksum="5019DA084622DA03" modified="2011-01-11" version="1">MKILETRGLRKTYGNGDTAVHALDGVNLEVESGEFVAIVGTSGSGKSTLLHMLGGLDRPTSGNVTVDGKDIYSLKNEELTIFRRRKIGFVFQNYNLVPVLNVYENIVLPIELDGKQPDKAYLTQITNTLGLKNKLNNLPSNLSGGQQQRVAIARALATKPAIILADEPTGNLDSKTSLDVMGLIKVSSQQFAQTMVMITHNEEIAQMADRIIRIEDGKIVGGATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBB6</accession>
    <name>E3EBB6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_21095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373017.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08325"/>
    <dbReference type="EnsemblBacteria" id="ADO58448">
        <property type="protein sequence ID" value="ADO58448"/>
        <property type="gene ID" value="PPSC2_21095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4485"/>
    <dbReference type="eggNOG" id="ENOG503476H">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1420238_0_0_9"/>
    <dbReference type="OMA" id="YFYNVYD"/>
    <dbReference type="OrthoDB" id="1556025at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="147"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="177"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="211" mass="24261" checksum="14AC4184B4C9917D" modified="2011-01-11" version="1">MEFKGEDGMNSEQPLPSGQPGQPHGQKQRGRLQYAKFRKVIAIIMAALIPGMGHLFLGLFIRGLTFIVLLLLDIFAMLYVSSDGLRINIPLLILLGLFIPVLYFYNVYDVLQSADYMVRYRRKPDQYARMDARGQQSSPFYAWERGFAFAVLLVAGGGLMILFRMKPRWLSIFFEDYGFLTLAIILMMIGLFLFLREAILSFKRKKLKERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBE0</accession>
    <name>E3EBE0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_21880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373181.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4668"/>
    <dbReference type="EnsemblBacteria" id="ADO58614">
        <property type="protein sequence ID" value="ADO58614"/>
        <property type="gene ID" value="PPSC2_21880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4654"/>
    <dbReference type="HOGENOM" id="CLU_2509594_0_0_9"/>
    <dbReference type="OrthoDB" id="153138at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="9497" checksum="EFD0EE2CE2A1304F" modified="2011-01-11" version="1">MTDTGAMAMRPADTGESKRRQDPRLREYGFTVDVGLVNSIPGTREQAAPFFFLKLGPALQPEGCSVRVHPLLQQIKINPHFKNVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX4</accession>
    <name>E3EBX4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_24185</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyl hydrolase 130 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373633.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11710"/>
    <dbReference type="EnsemblBacteria" id="ADO59098">
        <property type="protein sequence ID" value="ADO59098"/>
        <property type="gene ID" value="PPSC2_24185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5121"/>
    <dbReference type="eggNOG" id="COG2152">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046648_0_0_9"/>
    <dbReference type="OMA" id="KAVQMNI"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007184">
        <property type="entry name" value="Mannoside_phosphorylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34106">
        <property type="entry name" value="PTHR34106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04041">
        <property type="entry name" value="Glyco_hydro_130"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016202">
        <property type="entry name" value="PH1107"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="349" mass="39171" checksum="C8E0874B4EC2B701" modified="2011-01-11" version="1">MSKLNVDLDVGNVRIVGDSLSKMPWQDKPEGSEAPVWRHTENPVIGRNPVPGIARIFNSAVAPYEGRFVGIFRAETINGRPHLHLGWSDDGLAWDIETERLHLVDEEGNEYQPNYAYDPRLVRVEDTYYIIWCTDFYGAALGIAQTKDFKSFVRLENPFLPFNRNGVLLPRKLNGNFMLLSRPSDSGHTPFGDIFLSESPDLVYWGKHRHVMSKGGQGWWQSVKIGGGPAPIETTEGWLMFYHGVTGTCNGLVYSMGVAVLDLDDPSKVKYRSSNFVLTPEEWYEERGFVPNVVFPCATLHDADTGRIAIYYGAADTYVGIAYTTVSDIMEYVIATDEVVADDRESGRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBY9</accession>
    <name>E3EBY9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YjlC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yjlC</name>
        <name evidence="1" type="ORF">PPSC2_24255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373648.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11775"/>
    <dbReference type="EnsemblBacteria" id="ADO59113">
        <property type="protein sequence ID" value="ADO59113"/>
        <property type="gene ID" value="PPSC2_24255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5136"/>
    <dbReference type="eggNOG" id="ENOG5032RCT">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_140169_0_0_9"/>
    <dbReference type="OMA" id="LMKPEVQ"/>
    <dbReference type="OrthoDB" id="1925714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012440">
        <property type="entry name" value="DUF1641"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07849">
        <property type="entry name" value="DUF1641"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="143" mass="15871" checksum="13F98104B462381B" modified="2011-01-11" version="1">MSENQQEVAVTQEATKESRDVLDQLMKPEVQQSLTVLVENLPKLTEMVTFMTDAYDVARSLATDPVFIGDMKNSMGEFVKPVTDSAKGLASAAIEANDRVQTTDGSVGLFGLLKMLKDPNVQKTLRFSQAFLDILNERQRESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC15</accession>
    <name>E3EC15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">PhoP family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">walR3</name>
        <name evidence="9" type="ORF">PPSC2_25340</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373888.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12835"/>
    <dbReference type="EnsemblBacteria" id="ADO59355">
        <property type="protein sequence ID" value="ADO59355"/>
        <property type="gene ID" value="PPSC2_25340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5371"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OMA" id="IDRVWGS"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="137"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="137"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="27367" checksum="DC540B3F9E58147C" modified="2011-01-11" version="1">MQGTILVVDDEQPIADILKFNLEKEGYEVICAFDGISAVDIAVKQQPDLILLDLMLPGMDGMDVCREVRGHQLQTPIIMLTAKDGEIDKVLGLELGADDYVTKPFSTRELLARVKAQMRRQQRGVAGTPESRPQEDKQGLRVGDLFFDADMYTAYKNGTPLDLTHREYELLYYMAKNAGKVMTREHLLQAVWGFEYYGDVRTVDVTIRRLREKIEENPSKPETILTRRGLGYIVSGGKGGLRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECB0</accession>
    <name>E3ECB0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pspA1</name>
        <name evidence="2" type="ORF">PPSC2_01330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PspA/IM30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368895.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14050"/>
    <dbReference type="EnsemblBacteria" id="ADO54253">
        <property type="protein sequence ID" value="ADO54253"/>
        <property type="gene ID" value="PPSC2_01330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.263"/>
    <dbReference type="eggNOG" id="COG1842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056466_4_1_9"/>
    <dbReference type="OMA" id="KDMYIAR"/>
    <dbReference type="OrthoDB" id="941029at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007157">
        <property type="entry name" value="PspA_IM30"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31088">
        <property type="entry name" value="PTHR31088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04012">
        <property type="entry name" value="PspA_IM30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="24641" checksum="DC5C986B672E8AA1" modified="2011-01-11" version="1">MGILSRFRDIMKMNINALMDKASDPEKTIDDYMQNLNSDLGKVKAETASVLADEKRAKRALDECRTEIKKLQHYASKSVEAGNEEEARKFLERKGLQAEKLESLQTSYDLASANAVHMKQMQEKLVSDIGQLELRRAELKGKLAIAKAQQTLNSMGDHDSVFEALEEKVNRAYDEAMAIAELRTGTKDDLDALFAQYEKSTNPEDELAAIKKKINPKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECJ9</accession>
    <name>E3ECJ9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">Superoxide dismutase</fullName>
            <ecNumber evidence="2 6">1.15.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sodA</name>
        <name evidence="9" type="ORF">PPSC2_03925</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Destroys radicals which are normally produced within the cells and which are toxic to biological systems.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2 H(+) + 2 superoxide = H2O2 + O2</text>
            <dbReference type="Rhea" id="RHEA:20696"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:18421"/>
            <dbReference type="EC" id="1.15.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the iron/manganese superoxide dismutase family.</text>
    </comment>
    <dbReference type="EC" id="1.15.1.1" evidence="2 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369407.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16730"/>
    <dbReference type="EnsemblBacteria" id="ADO54771">
        <property type="protein sequence ID" value="ADO54771"/>
        <property type="gene ID" value="PPSC2_03925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.779"/>
    <dbReference type="eggNOG" id="COG0605">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031625_0_1_9"/>
    <dbReference type="OMA" id="KWGSFDK"/>
    <dbReference type="OrthoDB" id="1440645at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004784">
        <property type="term" value="F:superoxide dismutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001189">
        <property type="entry name" value="Mn/Fe_SOD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019833">
        <property type="entry name" value="Mn/Fe_SOD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019832">
        <property type="entry name" value="Mn/Fe_SOD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019831">
        <property type="entry name" value="Mn/Fe_SOD_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036324">
        <property type="entry name" value="Mn/Fe_SOD_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036314">
        <property type="entry name" value="SOD_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02777">
        <property type="entry name" value="Sod_Fe_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00081">
        <property type="entry name" value="Sod_Fe_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000349">
        <property type="entry name" value="SODismutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01703">
        <property type="entry name" value="MNSODISMTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46609">
        <property type="entry name" value="SSF46609"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54719">
        <property type="entry name" value="SSF54719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00088">
        <property type="entry name" value="SOD_MN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sod_Fe_N" evidence="7">
        <location>
            <begin position="3"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="Sod_Fe_C" evidence="8">
        <location>
            <begin position="97"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000349-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="22724" checksum="1D8237BF758A3819" modified="2011-01-11" version="1">MAFQLPELPYAKDALEPHFDALTMEIHHDRHHNTYVTNLNAALESAPELQSKSLEDLISNLDSVPESIRTAVRNNGGGHHNHSLFWEVIGPNGGGQPTGAIAEAINNELGGYDKFKEDFTKAATTRFGSGWAWLVVGKDGKLAITSTPNQDSPLFEGLTPVLGLDVWEHAYYLKYQNKRPDYIAAFYNVINWDEVNKRYAAAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECL8</accession>
    <name>E3ECL8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-938</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-938</name>
        <name evidence="2" type="ORF">PPSC2_04000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369425.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16800"/>
    <dbReference type="EnsemblBacteria" id="ADO54790">
        <property type="protein sequence ID" value="ADO54790"/>
        <property type="gene ID" value="PPSC2_04000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.797"/>
    <dbReference type="eggNOG" id="ENOG502Z7JI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048731_0_0_9"/>
    <dbReference type="OMA" id="GWWYKGR"/>
    <dbReference type="OrthoDB" id="1335440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024301">
        <property type="entry name" value="Amidase_6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12671">
        <property type="entry name" value="Amidase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidase_6" evidence="1">
        <location>
            <begin position="166"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="331" mass="38331" checksum="CC48CC691B9C3164" modified="2011-01-11" version="1">MGEREWKQALFAYVNQYNRSEVNGVPQPDEYLEVGQRMERAARAARLEQWYSERDAVPLRSETRAKPIRIVQDTPDEAVVDVQLHVRLFYEKGGMTHREDRIERERLTFTREGEAWQVTRIERDPAERKPAGGEVPFEQASFNQGGSLPLLNRGVLGFGSSARPSRYRREEAAAYADQWWDSFNPEFEAFDVDCTNYISQCLFAGGAPIHYTGKRESGWWYKGRVAGRELWSYSWAVSNSLERYLGSSSWGLTAEQVSRPEQLMLGDVIFYDWDGDGTFQHSTVVTAFDAGGMPLVNAHTVSSRHRYWDYKNSYAWTDNTVYRFYHIADYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED91</accession>
    <name>E3ED91_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oligo-1,6-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">malL</name>
        <name evidence="2" type="ORF">PPSC2_02385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369088.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15150"/>
    <dbReference type="CAZy" id="GH13">
        <property type="family name" value="Glycoside Hydrolase Family 13"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54448">
        <property type="protein sequence ID" value="ADO54448"/>
        <property type="gene ID" value="PPSC2_02385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.458"/>
    <dbReference type="eggNOG" id="COG0366">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006462_1_2_9"/>
    <dbReference type="OMA" id="YSTARDV"/>
    <dbReference type="OrthoDB" id="1573900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045857">
        <property type="entry name" value="O16G_dom_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="1">
        <location>
            <begin position="14"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="566" mass="66634" checksum="35F9D44B8722785E" modified="2011-01-11" version="1">MPKKIWWKEAVVYQIYPISFQDSDGDGKGDLRGILSRLDYLSELGIDVIWICPIYKSPNHDNGYDISDYYAIMDEFGTMEDFDELLHQAHERGIKIMMDLVLNHTSDEHPWFTESRSSKDNPKRDYYIWRTGKNGGYPNNWESYFSGSVWKYDKLTDEYYMHLYSEHQPDLNWENEEMVGELYRMVEWWLKKGVDGFRFDAIAHIVKAEGLPDAHNPDKQTLVRAYQLFSNLEQVHVLLRMLNEKVLERYPLMTVGETSGLGPEQALDYVGDQRHELNMVFQFEHMFIDAQGLGTEKWKYKSWTLVELKKIMSSWQTVLHQEGWNANYLNNHDQPRALSRFANDGQYRVESAKMLATFTHMLEGTPYIYQGEEIGMTNIAFPSIDDYRDVETLNYYEQQRKLGEPEEQIMAAIWRKSRDNARTPMQWNAGPAAGFTDGEPWMKINDNYTHINAEAERNDPNSIFHYYRKLIALRKQHEVIVYGEYKLLLPLDTELYVFSRMLGQECLLVILNFFDRDPVFHWPDGEKFPAAKAELLLSNYEPVKGENLHALKLRPYEARVYKLTLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED96</accession>
    <name>E3ED96_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yajO</name>
        <name evidence="3" type="ORF">PPSC2_02405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369093.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0469"/>
    <dbReference type="EnsemblBacteria" id="ADO54453">
        <property type="protein sequence ID" value="ADO54453"/>
        <property type="gene ID" value="PPSC2_02405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.463"/>
    <dbReference type="eggNOG" id="COG0667">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_0_9"/>
    <dbReference type="OMA" id="VDLWQVH"/>
    <dbReference type="OrthoDB" id="1351747at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="2">
        <location>
            <begin position="16"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="221"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="224"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="36533" checksum="3ECE0DB537CCD01F" modified="2011-01-11" version="1">MDYVKLGNTGLDVSRLCLGCMGFGVAERWIHPWILDEERSRPVIKKALELGINFFDTANVYSDGTSEEIVGRALKDYANRDEIVLATKVHFRMHQGPNGAGLSRKAIMSEIDKSLKRLGTDYVDLYQIHRWDYNTPIEETMEALHDVVKAGKARYIGASAMYAWQFLKALHVAENNGWTRFVSMQNHLNLLYREEEREMLPLCKEEKIGVIPYSPLAGGRLTRDTQETTHRSETDQVSKSKYDATADSDRLIVDQVATIAEKRGVPRVQIALAWLLQKAPVTAPIIGATKTSHLEDAVAALSITLTPEEIASLEELYVPHPVIGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDA1</accession>
    <name>E3EDA1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">PTS sugar transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">levR</name>
        <name evidence="6" type="ORF">PPSC2_02430</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369098.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0474"/>
    <dbReference type="EnsemblBacteria" id="ADO54458">
        <property type="protein sequence ID" value="ADO54458"/>
        <property type="gene ID" value="PPSC2_02430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.468"/>
    <dbReference type="eggNOG" id="COG1221">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3933">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014204_1_1_9"/>
    <dbReference type="OMA" id="ELNCADY"/>
    <dbReference type="OrthoDB" id="451517at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00006">
        <property type="entry name" value="PTS_IIA_man"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.510">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011608">
        <property type="entry name" value="PRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036634">
        <property type="entry name" value="PRD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004701">
        <property type="entry name" value="PTS_EIIA_man-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036662">
        <property type="entry name" value="PTS_EIIA_man-typ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033887">
        <property type="entry name" value="PTS_IIA_man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025943">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03610">
        <property type="entry name" value="EIIA-man"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00874">
        <property type="entry name" value="PRD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53062">
        <property type="entry name" value="SSF53062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63520">
        <property type="entry name" value="SSF63520"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51096">
        <property type="entry name" value="PTS_EIIA_TYPE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00676">
        <property type="entry name" value="SIGMA54_INTERACT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="3">
        <location>
            <begin position="108"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="5">
        <location>
            <begin position="466"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-4" evidence="4">
        <location>
            <begin position="570"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="5">
        <location>
            <begin position="828"/>
            <end position="930"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="930" mass="105087" checksum="BCAE146BF9F2DB40" modified="2011-01-11" version="1">MKRIDEILEYIANGTKKLSVEALQDGSGITAAEIADQHNMLRNNVSKELNSLLRADLIIKIKGRPVKFLHKQVIEETFRVQLKEKQIQVNSIHEILLPGEQVDPFHALIGFMGSMRNQVEQGKAAILYPPKGLHTLIVGQTGVGKTMFARLMYNYGKYMKRFSEQAPFIVFNCADYYNNPQLLLSHIFGHVKGAFTGADREKEGLVEKADGGILFLDEIHRLPPEGQEMIFYFMDTNSYNKLGESERKREANVLLIGATTEDPGSSMLKTFIRRIPITINIPSLQERTVEERFLILKHLFANEAHRVNKPIRVELETVKALIGSVTYGNIGQLKSNIQLVCAKGFLNSIHENKEEIELDFKILPGNIKEGLFNMGKNRKEIAEMEMVNSSLYITPEGSKGMDEADASELPFNLYKLIEDKIGMLKEEGLDDSFINKFITTDVNIHIKSFYNRFYNIKGGRERILKIVGRNILEFAEQVQEMAQKELNRNYSDRFVYAFSLHLSAFLKRIREKKYVSKQIYDPMNDQDEEYRLALIIKDLIESKFEVNVPDAETTYVAILLKSVEEEHQGNVGIIVAAHGNSTASSVVSVVDSLLGSSNICAVDMPLDVSPREILEVIVDKVKDIDNGRGVLLLVDMGSLLNLEATIMERVGIKVKTIDMVSTPLVLEAVRKASIFDMNIEEIYQSLKDFRGYNTGNAGVKAEKTSNKVIVTVCSSGKGAAAKLKEFVEKVVYDLTEEKIVVVPAKVRELDKVVKDLRAKHTLLAVIGVKRPSELNVPFIPLEKLIEASGEQALRELLLNNQLPVMHEHGSVVVRDLCEDTLKEFMTYLNPHKILGILMKFIEQLEQELEADFHYAKKVQLAVHTAHALERMVIGEGLVYQEDVSLLDQRLIDVVNRSCNIFASSINIKLTNDEKYYICEILSEVYNCIPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDA2</accession>
    <name>E3EDA2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">PTS mannose transporter subunit IID</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">manX1</name>
        <name evidence="10" type="ORF">PPSC2_02435</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369099.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0475"/>
    <dbReference type="EnsemblBacteria" id="ADO54459">
        <property type="protein sequence ID" value="ADO54459"/>
        <property type="gene ID" value="PPSC2_02435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.469"/>
    <dbReference type="eggNOG" id="COG2893">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_123235_1_1_9"/>
    <dbReference type="OMA" id="IVHNAQN"/>
    <dbReference type="OrthoDB" id="2008912at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00006">
        <property type="entry name" value="PTS_IIA_man"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.510">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013789">
        <property type="entry name" value="PTS_EIIA_man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004701">
        <property type="entry name" value="PTS_EIIA_man-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036662">
        <property type="entry name" value="PTS_EIIA_man-typ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033887">
        <property type="entry name" value="PTS_IIA_man"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03610">
        <property type="entry name" value="EIIA-man"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53062">
        <property type="entry name" value="SSF53062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00824">
        <property type="entry name" value="EIIA-man"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51096">
        <property type="entry name" value="PTS_EIIA_TYPE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="PTS EIIA type-4" evidence="9">
        <location>
            <begin position="1"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="15391" checksum="596DC68A04D06018" modified="2011-01-11" version="1">MIGVIVGTHGKFSEEILRSTEMIFGHLENVVGVTFEPGESVNGLVEKYKAALETIDWTDGLIFLVDLFGGSPYNAASRIVARYEKMDIVTGVNLPMIVDLLTNRGLENVENLSDLAIRAGQDSMKSFRVIRDIQTEEEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDB9</accession>
    <name>E3EDB9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaS3</name>
        <name evidence="5" type="ORF">PPSC2_04495</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369531.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17395"/>
    <dbReference type="EnsemblBacteria" id="ADO54898">
        <property type="protein sequence ID" value="ADO54898"/>
        <property type="gene ID" value="PPSC2_04495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.901"/>
    <dbReference type="eggNOG" id="COG0662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="OMA" id="NNDERHI"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="196"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="36211" checksum="A5466219CEFE506F" modified="2011-01-11" version="1">MPRKKKPVIEYRHYSLPINFPVLLLSGERWKISDIKSEHLHFHNHLEIGICYSDGGFMEIKGETVPFKAGDVTFIPRYLPHTTYSSPNTASLWSYIFFSPEDLFQHSFKSAYRNFEPNLWVMKGTNCILNKEQHPKVYTLATSIVEELQQQNPYYQESAYGLLLSLYIELLRIHSRNESLKDAETVHSRKSDFAISPALEYITKNYMTPVNIDFLADLCHLSTTHFRRKFHEIMGTSPLYFLNSTRIEEACKQLKSTDDSILSISEQVGYRSISSFNRCFSKLIGEPPKEWRKGAQSEAQSAKASILEFTGWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDK0</accession>
    <name>E3EDK0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Potassium-transporting ATPase potassium-binding subunit</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ATP phosphohydrolase [potassium-transporting] A chain</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Potassium-binding and translocating subunit A</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Potassium-translocating ATPase A chain</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">kdpA</name>
        <name evidence="10" type="ORF">PPSC2_06405</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds the extracellular potassium ions and delivers the ions to the membrane domain of KdpB through an intramembrane tunnel.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">The system is composed of three essential subunits: KdpA, KdpB and KdpC.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the KdpA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369939.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19350"/>
    <dbReference type="EnsemblBacteria" id="ADO55308">
        <property type="protein sequence ID" value="ADO55308"/>
        <property type="gene ID" value="PPSC2_06405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1319"/>
    <dbReference type="eggNOG" id="COG2060">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018614_3_0_9"/>
    <dbReference type="OMA" id="RQGWAIL"/>
    <dbReference type="OrthoDB" id="296671at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008556">
        <property type="term" value="F:P-type potassium transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030955">
        <property type="term" value="F:potassium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00275">
        <property type="entry name" value="KdpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004623">
        <property type="entry name" value="KdpA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30607">
        <property type="entry name" value="PTHR30607"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03814">
        <property type="entry name" value="KdpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001294">
        <property type="entry name" value="K_ATPaseA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00680">
        <property type="entry name" value="kdpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0630">Potassium</keyword>
    <keyword evidence="3 9" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="131"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="173"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="256"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="281"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="377"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="419"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="479"/>
            <end position="505"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="526"/>
            <end position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="558" mass="60112" checksum="A42B0430BB05B28A" modified="2011-01-11" version="1">MELLQIGVVIVILLLLVKPVGTYMYHVFSNEPNRTDRIFGETEKPIYKVVGLKKQDSMRWTTYAMSFIATNVVLVGISYLLLRLQAILPGNPVGNSNMEASLAFNTVISFMTNTNLQHYSGESGLTYLTQMAFVTMMMFTSAASGFSVAAAFMRGLTRRGEGLGNFFQDFIKANIRIFLPLAFVLTLVLVGLKVPQTLQSTADITTLSGTQQQIAMGPIASLESIKHLGTNGGGFAGANSAHPFENPSPWTNVLEILAMWVMPASLPYTFGLFARNRKQGWIIFSSMMVLFLIFLSITYVSEKTGNPLIQALGMDASQGSMEGKEVRFGIGQSALFTAVTTAATTGSVNNMHDTLTPLGGMAALGEMMLNVIFGGKGVGLMNMLMYAILGVFICGLMVGRTPEFMGRKIEGKEMKLIAIAILVHPFLILAPTALAFMSHWGYDAVSNPGYHGLTQVLYEYASSAANNGSGFEGIADNNVFWNVTTGAVMFFGRYVSMIALLAVAASLNAKAPTPVTTGTLRTDNKLFGAILIGVVLLIGALTFLPVIVLGPVAEFLTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDQ8</accession>
    <name>E3EDQ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">PTS glucose transporter subunit IIABC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">bglP1</name>
        <name evidence="12" type="ORF">PPSC2_06675</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369997.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1387"/>
    <dbReference type="EnsemblBacteria" id="ADO55366">
        <property type="protein sequence ID" value="ADO55366"/>
        <property type="gene ID" value="PPSC2_06675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1374"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_2_0_9"/>
    <dbReference type="OMA" id="IEPAMYG"/>
    <dbReference type="OrthoDB" id="328780at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 12" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="109"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="175"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="220"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="258"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="288"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="315"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="357"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="11">
        <location>
            <begin position="41"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="43930" checksum="A40E922E2369D258" modified="2011-01-11" version="1">MDRELLSKEINSEVEGEDKQEPTRDKDKANRGGNPFSRLFDFISDVFTPCLPLLIGGGIIQVIAPVLLFLDLFSDTQVSTVLGYIGGVVYYFLPVMIAVNAARKLGSNLFIAAAIAACSFHPGIIELLQSSIKMNSDDLPVVEPQYVASFILILIVVWLASKIEKGLSRFDRYSIQLLVVPTLTLIIIVPLLLFVFGPLWTTLAHNLSDGLASLFDDAEVFAGLLFGGTIPVLHFAGMQYMMSMNIIESMATKGYDSITPVVAAAVMAQAGAAFGVCVKSKNAKVKTLAASTGILAMFGIIEPALYGVNVRFKKPLIAGLIGGAVGGACMCLFEVKLTAFAALSGLLSLPLFSDATFVYAILSMLISFVTAGVITYFMGFVDEKEERSKIASASRISASSDLNVEKSSNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE16</accession>
    <name>E3EE16_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">Ribonucleoside-diphosphate reductase</fullName>
            <ecNumber evidence="4 12">1.17.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">nrdA</name>
        <name evidence="14" type="ORF">PPSC2_02705</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>[thioredoxin]-disulfide + a 2'-deoxyribonucleoside 5'-diphosphate + H2O = [thioredoxin]-dithiol + a ribonucleoside 5'-diphosphate</text>
            <dbReference type="Rhea" id="RHEA:23252"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="EC" id="1.17.4.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Genetic information processing; DNA replication.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the ribonucleoside diphosphate reductase large chain family.</text>
    </comment>
    <dbReference type="EC" id="1.17.4.1" evidence="4 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54496.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599421.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15470"/>
    <dbReference type="EnsemblBacteria" id="ADO54496">
        <property type="protein sequence ID" value="ADO54496"/>
        <property type="gene ID" value="PPSC2_02705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.505"/>
    <dbReference type="eggNOG" id="COG0209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000404_4_1_9"/>
    <dbReference type="OrthoDB" id="357568at2"/>
    <dbReference type="UniPathway" id="UPA00326"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004748">
        <property type="term" value="F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005144">
        <property type="entry name" value="ATP-cone_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013346">
        <property type="entry name" value="NrdE_NrdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000788">
        <property type="entry name" value="RNR_lg_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013509">
        <property type="entry name" value="RNR_lsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008926">
        <property type="entry name" value="RNR_R1-su_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039718">
        <property type="entry name" value="Rrm1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11573">
        <property type="entry name" value="PTHR11573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02867">
        <property type="entry name" value="Ribonuc_red_lgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00317">
        <property type="entry name" value="Ribonuc_red_lgN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01183">
        <property type="entry name" value="RIBORDTASEM1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48168">
        <property type="entry name" value="SSF48168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02506">
        <property type="entry name" value="NrdE_NrdA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51161">
        <property type="entry name" value="ATP_CONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6 12" id="KW-0235">DNA replication</keyword>
    <keyword evidence="7 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 12 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-cone" evidence="13">
        <location>
            <begin position="3"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO54496.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="777" mass="87991" checksum="F967A7B4348A3F0C" modified="2015-05-27" version="2">MPQLVTKPNNRQLAFDEIRISVYADRVLSGLDKLDKDRLIRGVTSKLRRDEVTGDEISNAFAMAALELVSKEEPDWKFAAARALLTSLYKKAATHRRYKSYADEPYGAFYPLITDLVQKGIYRQELLDCYTKEQIDELGDSILPQNDLLFDYIGLLTLSERYLANDFDGRVMELPQERYMIIAMYLMHQEPADKRMELVKEAYWAMSNMYMTAATPTMSNAGKKVAGQLSSCFIDTVDDSLEGIFDSNTDVARLSKMGGGIGVYLGKVRARGSDIRGHKNTSSGVIPWIRQLNNTAVSVDQLGTRKGAIAVYLDVFHKDILAFLDLKLNNGDERMRAHDVFHGVCLPDLFMERVEARGEWNLFCPHEVKKVMGWKDDKGRPLGLEDFYDEAFGSGSFREKYEEASKHPILSRITVPAIDIMKRLMKSQLETGTPYMFYRDTVNRANPNRAHGMVYSSNLCTEIMQNQSATVVEKEELVTKDGQTRIVISKIPGDFVVCNLNSIHLARAVPAGVLDRLVPIQVRMLDNVIDINNIEVLQAQYTNSQYRAVGLGTFGLHHLLALEGIRWESDEAVTYNDHLYEKINYLAVKSSMELAKEKGRYAKFEGSDWATGHYFTSRGYTDGTREGKFVTTSEWSELAEEVQQNGVRNAWLFAIAPNGSTSIIAGSTASIDPLYELLSYEEKTTYKIANPAPDLNEKTIWYYKTAFLLDQHASINMASARQRHIDQGQSFNLYVRPDIKATEFLELHIHAWKSGMKSTYYVRSRALTIEECESCAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE61</accession>
    <name>E3EE61_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yceE</name>
        <name evidence="3" type="ORF">PPSC2_04905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CAPAB/TerDEXZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369617.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17800"/>
    <dbReference type="EnsemblBacteria" id="ADO54984">
        <property type="protein sequence ID" value="ADO54984"/>
        <property type="gene ID" value="PPSC2_04905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.988"/>
    <dbReference type="eggNOG" id="COG2310">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055120_2_0_9"/>
    <dbReference type="OMA" id="FGMIQNA"/>
    <dbReference type="OrthoDB" id="1437267at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06974">
        <property type="entry name" value="TerD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003325">
        <property type="entry name" value="TerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02342">
        <property type="entry name" value="TerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TerD" evidence="2">
        <location>
            <begin position="4"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="21489" checksum="7243F91ACBA564D9" modified="2011-01-11" version="1">MAVINLVKGQKIDLTKGNTGLTKVIAGLGWDPVQSKGFFGFKKQPNIDCDASAILLDANGKLTQSDNVVCFHNKKSPCGSVVHSGDNLTGQGDGDDEQIMIDLARIPANVDKVLVVVNIYDCVNRKQDFGMIEKAYIRILDGANSKELVTFNLSDNFEGMTALICGELYRHNDEWKFAAIGAGTHAVHIDVLAERYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE62</accession>
    <name>E3EE62_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemical-damaging agent resistance protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yceE1</name>
        <name evidence="3" type="ORF">PPSC2_04910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CAPAB/TerDEXZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369618.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17805"/>
    <dbReference type="EnsemblBacteria" id="ADO54985">
        <property type="protein sequence ID" value="ADO54985"/>
        <property type="gene ID" value="PPSC2_04910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.989"/>
    <dbReference type="eggNOG" id="COG2310">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055120_2_0_9"/>
    <dbReference type="OMA" id="GNFVFFN"/>
    <dbReference type="OrthoDB" id="1437267at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06974">
        <property type="entry name" value="TerD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003325">
        <property type="entry name" value="TerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02342">
        <property type="entry name" value="TerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TerD" evidence="2">
        <location>
            <begin position="1"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="191" mass="20952" checksum="8E91813031EB312C" modified="2011-01-11" version="1">MAINLSKGQKIDLTKTNPGLSKIMVGLGWDTNKYDGGKDFDLDVSVFLANADGKVETEKNFVFFNNPQNENGSVVHTGDNRTGEGDGDDEQIKVDLSNVPANVEKIAFTITIYDAQERSQNFGQVSRAYARIVNEANNEELVRFDLGEDFSIETGVVVGELYRHSGEWKFNAIGSGYQDGLAGLTRDYGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEG5</accession>
    <name>E3EEG5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HAD family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370047.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19865"/>
    <dbReference type="EnsemblBacteria" id="ADO55416">
        <property type="protein sequence ID" value="ADO55416"/>
        <property type="gene ID" value="PPSC2_06895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1422"/>
    <dbReference type="eggNOG" id="COG1011">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045011_8_3_9"/>
    <dbReference type="OMA" id="AGLHTIW"/>
    <dbReference type="OrthoDB" id="1204073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006549">
        <property type="entry name" value="HAD-SF_hydro_IIIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01662">
        <property type="entry name" value="HAD-SF-IIIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="26952" checksum="F3CCB8A41509A1B5" modified="2011-01-11" version="1">MSIEAIIFDLDNTLIHRKQAFAAYTERFIERFIVAEEPASRAAVVERIRLADQDGYRDKRELYTELHADLKLKNPDTTVQEMLGFWYGEFHKFTVLMDGAKEVLSELRSRGLKLGIITNGSLRTQQAKIDRVMLRDYVDSIIVSGGVNVEKPNPRIFELALKELDIAEPGHACYVGDHPTNDIRGAQSAGLHTIWLEGFMTWNEMDIVPDHQIGSLREITGWLDRLSYPSNMEEGAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEI9</accession>
    <name>E3EEI9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase family 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">epsG</name>
        <name evidence="2" type="ORF">PPSC2_07020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370071.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20000"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55440">
        <property type="protein sequence ID" value="ADO55440"/>
        <property type="gene ID" value="PPSC2_07020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1448"/>
    <dbReference type="eggNOG" id="COG1215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023978_1_1_9"/>
    <dbReference type="OMA" id="VICDNCT"/>
    <dbReference type="OrthoDB" id="724641at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="294"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="336"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="363"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="412" mass="48112" checksum="3F952543ACB95B6B" modified="2011-01-11" version="1">MLDAIFVTLQIILALIAVYQFAFSLFGLVRKKRKEQAAPEKSFAILVAAHNEEQVVGALMENLKQLDYPKELYDVFVICDNCTDKTADIVRAHGMNACERTNPNLRGKGYAIEWMLKELWAMRRQYDAIVMFDADNLAHTNFLSEMNNDLCSGARVIQGYIDTKNPEDSWITAAYGVSYWYINRLWQLSRHNLNMANFLGGTGMCFETNLLKEMGWGATSLVEDLEFTMRCTQRNVYPRFNYDAKVYDEKPLTFKASSRQRLRWMQGHFTVARRYFFPLLWQSIKHRSLIKFDMALYGLNVYIVLFTFLMTVAMWIDIVLFGGPNIENIYVQFPAWTGFVAVSLNIITFLIAMILEKVTFKKVYLYLLLFPVYLISWYPITFYAFFTQNNKQWSHTQHTRVVRLEEVQSKQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF85</accession>
    <name>E3EF85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-755</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="primary">M1-755</name>
        <name evidence="2" type="ORF">PPSC2_03190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO54605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16000"/>
    <dbReference type="EnsemblBacteria" id="ADO54605">
        <property type="protein sequence ID" value="ADO54605"/>
        <property type="gene ID" value="PPSC2_03190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.611"/>
    <dbReference type="eggNOG" id="COG2461">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_188488_1_0_9"/>
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    <dbReference type="OrthoDB" id="1898055at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015077">
        <property type="entry name" value="DUF1858"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038062">
        <property type="entry name" value="ScdA-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08984">
        <property type="entry name" value="DUF1858"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140683">
        <property type="entry name" value="SSF140683"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1858" evidence="1">
        <location>
            <begin position="7"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8605" checksum="2240C42F4173E9A7" modified="2011-01-11" version="1">MDKILHWDESIFNLVNRHPEVKDIMVKLGFDDIAKPGMLQTAGRFMTLSKGIALKKIGMETVQQTFMQHGFTIQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFE4</accession>
    <name>E3EFE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoribosyl-ATP pyrophosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18380"/>
    <dbReference type="EnsemblBacteria" id="ADO55107">
        <property type="protein sequence ID" value="ADO55107"/>
        <property type="gene ID" value="PPSC2_05470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1111"/>
    <dbReference type="eggNOG" id="COG4997">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_142081_0_0_9"/>
    <dbReference type="OMA" id="MPTYNKL"/>
    <dbReference type="OrthoDB" id="2050907at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11532">
        <property type="entry name" value="NTP-PPase_COG4997"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038735">
        <property type="entry name" value="MSMEG_1276-like_NTP-PPase_dom"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="12508" checksum="80E7D0B85F7AFD5C" modified="2011-01-11" version="1">MPTYNKLVRDRIPHIIMSQGKESRTRILDTEEYKQELRTKLREETEEYFAADKDQDALEELADMLEVIRALAEVHGANVTELDKLLAAKTEARGGFQERVFLIDVDEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFE7</accession>
    <name>E3EFE7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araH</name>
        <name evidence="7" type="ORF">PPSC2_05485</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369743.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18395"/>
    <dbReference type="EnsemblBacteria" id="ADO55110">
        <property type="protein sequence ID" value="ADO55110"/>
        <property type="gene ID" value="PPSC2_05485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1114"/>
    <dbReference type="eggNOG" id="COG4214">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028880_2_0_9"/>
    <dbReference type="OMA" id="IDWQQAI"/>
    <dbReference type="OrthoDB" id="1254678at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="121"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="208"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="233"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="282"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="318"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="387" mass="41392" checksum="D40C58C82C8A06A0" modified="2011-01-11" version="1">METITKLFKNNIRQYGMMIALVVIMILFEVLTGGLLLKPINITNLILQNSYILVLAIGMVLVIITGHIDLSVGSIAAFVGAVAAIMMVDWQLPAWIAVIAALLVGALIGAWQGFWVAYVRIPAFIVTLAGMLLFRGLTMIVLEGQSISPFPGGFQKISSGFLPDFSATGYNLVSIIVGIALTVWFIVNELRERRSQLKYGFEVPPQALFVLKLIVVAAVINLFTFMLASYAGIPNILVLLFILIVVYSFVMNRTIMGRHVYALGGNEKAAGLSGVKTKKVTFWVFVNMGVLAAISGLIFAARLNAATPRAGTNFELDAIAACFIGGASASGGIGTVFGAIIGGLVMGVLNNGMSLIGLGIDWQQGIKGLVLLLAVAFDIYNKNKRSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFG0</accession>
    <name>E3EFG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaR2</name>
        <name evidence="5" type="ORF">PPSC2_05555</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369756.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18460"/>
    <dbReference type="EnsemblBacteria" id="ADO55123">
        <property type="protein sequence ID" value="ADO55123"/>
        <property type="gene ID" value="PPSC2_05555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1129"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="OMA" id="LPHCWKN"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="173"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="32740" checksum="60ACE999575E9956" modified="2011-01-11" version="1">MKKIYEHIEIDRRKMINLFMFQSTDTERVIPMHFHSNMELIYCTSGSLKVWHEGKITILKEKDALFINSNVPHSTQSITENQVVVLQFPATFFANEQVFIQLNTQERQVEHTILSKLRELFMDIYNLHISKGKYDYILEQSRIIELKYLLVNHFSQTADIQPEVFSEKQRKIKTIMDFIKEHYAENISLAKTARICGYSEAYLSRMFHEYTGQTFTEYKQILCLEKAIDLLETTNKSLTEISYEAGFPNEKSFRKAFKEVMGKTPYEYKKSKFDLSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFG4</accession>
    <name>E3EFG4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">7-cyano-7-deazaguanine synthase</fullName>
            <ecNumber evidence="1">6.3.4.20</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">7-cyano-7-carbaguanine synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">PreQ(0) synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Queuosine biosynthesis protein QueC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1" type="primary">queC</name>
        <name evidence="2" type="synonym">thiI1</name>
        <name evidence="2" type="ORF">PPSC2_05575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>7-carboxy-7-deazaguanine + ATP + NH4(+) = 7-cyano-7-deazaguanine + ADP + H(+) + H2O + phosphate</text>
            <dbReference type="Rhea" id="RHEA:27982"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:45075"/>
            <dbReference type="ChEBI" id="CHEBI:61036"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="1">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; 7-cyano-7-deazaguanine biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the QueC family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.20" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369760.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18480"/>
    <dbReference type="EnsemblBacteria" id="ADO55127">
        <property type="protein sequence ID" value="ADO55127"/>
        <property type="gene ID" value="PPSC2_05575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1133"/>
    <dbReference type="eggNOG" id="COG0603">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081854_0_0_9"/>
    <dbReference type="OMA" id="CESCMRR"/>
    <dbReference type="OrthoDB" id="1681374at2"/>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01995">
        <property type="entry name" value="ExsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01633">
        <property type="entry name" value="QueC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018317">
        <property type="entry name" value="QueC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42914">
        <property type="entry name" value="PTHR42914"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06508">
        <property type="entry name" value="QueC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006293">
        <property type="entry name" value="ExsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00364">
        <property type="entry name" value="TIGR00364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="11"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="227" mass="25040" checksum="3148E88FFD3F27A6" modified="2011-01-11" version="1">MFTNEKAVVVFSGGQDSTTCLFWAKKHFAEVETVTFDYGQRHKQEIEVAAGIASELGVPQTVLDMSLLNQLAPNALTRTDIDITQEEGELPSTFVDGRNLLFLSFAAVLAKQKGARHIITGVCETDFSGYPDCRDSFIKSLNVTLNLSMDYPFVIHTPLMWLNKAETWQMADELKAFEFVRTRTLTCYNGIIGDGCGECPACNLRRAGLEQYLAVRGASSQGVEGHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGE7</accession>
    <name>E3EGE7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Triosephosphate isomerase</fullName>
            <shortName evidence="3">TIM</shortName>
            <shortName evidence="3">TPI</shortName>
            <ecNumber evidence="3 4">5.3.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Triose-phosphate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tpiA</name>
        <name evidence="5" type="synonym">tpi</name>
        <name evidence="5" type="ORF">PPSC2_00960</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>D-glyceraldehyde 3-phosphate = dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:18585"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="5.3.1.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the triosephosphate isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.1" evidence="3 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368819.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13950"/>
    <dbReference type="EnsemblBacteria" id="ADO54175">
        <property type="protein sequence ID" value="ADO54175"/>
        <property type="gene ID" value="PPSC2_00960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.179"/>
    <dbReference type="eggNOG" id="COG0149">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024251_2_3_9"/>
    <dbReference type="OMA" id="QEVCGAI"/>
    <dbReference type="OrthoDB" id="1266295at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00189"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004807">
        <property type="term" value="F:triose-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00311">
        <property type="entry name" value="TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00147_B">
        <property type="entry name" value="TIM_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035990">
        <property type="entry name" value="TIM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022896">
        <property type="entry name" value="TrioseP_Isoase_bac/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000652">
        <property type="entry name" value="Triosephosphate_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020861">
        <property type="entry name" value="Triosephosphate_isomerase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21139">
        <property type="entry name" value="PTHR21139"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00121">
        <property type="entry name" value="TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51351">
        <property type="entry name" value="SSF51351"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00419">
        <property type="entry name" value="tim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00171">
        <property type="entry name" value="TIM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51440">
        <property type="entry name" value="TIM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3 4" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="3 4" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="2 3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="9"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="233"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="active site" description="Electrophile" evidence="3">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="250" mass="26750" checksum="867DE8C04F3BCCA5" modified="2011-01-11" version="1">MRTPIIAGNWKMFKTVPEAKTFIEEIKGKAEVAGVESVICAPFTNLPALVEAVKGTSIKIGAQNLHFAEDGAFTGEISGGMLKDLGVDYVVIGHSERREYFNETDETVNKKVHAAFRHGLTPIVCVGEKLEDREAGQTKEVVKVQTVAAFAGLAKDQAAQVVVAYEPIWAIGTGKSSTSQDANEVISYIRSLIKELYDENTASAVRIQYGGSVKPENVTEYLGQSDIDGALVGGASLQPASYIALVEGAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGN4</accession>
    <name>E3EGN4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PadR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">padR1</name>
        <name evidence="3" type="ORF">PPSC2_03495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369310.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16290"/>
    <dbReference type="EnsemblBacteria" id="ADO54673">
        <property type="protein sequence ID" value="ADO54673"/>
        <property type="gene ID" value="PPSC2_03495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.683"/>
    <dbReference type="eggNOG" id="COG1695">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089258_1_3_9"/>
    <dbReference type="OMA" id="QFGHYLV"/>
    <dbReference type="OrthoDB" id="1629615at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018309">
        <property type="entry name" value="Tscrpt_reg_PadR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005149">
        <property type="entry name" value="Tscrpt_reg_PadR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03551">
        <property type="entry name" value="PadR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10400">
        <property type="entry name" value="Vir_act_alpha_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PadR" evidence="1">
        <location>
            <begin position="9"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="Vir_act_alpha_C" evidence="2">
        <location>
            <begin position="96"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="21487" checksum="401BED7630F32A4F" modified="2011-01-11" version="1">MKRTLKYAILGLVHKEEMSGYDITSQFKQEIGQFWSAKHSQIYPELKRLTEEGLIEYRTSITGAKLEKKLYCITPKGTQELTEWLLSPKELPETEKDEFMLMLYFSAAIPKEESKRLFEDQIAKREEKLEYLYESKKSLQRLDENLQVPGSSQFGHYLVLSRAINREESYITWLKETLSLFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGQ4</accession>
    <name>E3EGQ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aminoglycoside adenylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">aadE</name>
        <name evidence="1" type="ORF">PPSC2_05625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369771.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1158"/>
    <dbReference type="EnsemblBacteria" id="ADO55138">
        <property type="protein sequence ID" value="ADO55138"/>
        <property type="gene ID" value="PPSC2_05625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1144"/>
    <dbReference type="eggNOG" id="ENOG502Z7S1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076578_1_0_9"/>
    <dbReference type="OMA" id="FDDCCNE"/>
    <dbReference type="OrthoDB" id="1182556at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007530">
        <property type="entry name" value="Aminoglycoside_adenylylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04439">
        <property type="entry name" value="Adenyl_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000812">
        <property type="entry name" value="AAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="33599" checksum="C73E051024457999" modified="2011-01-11" version="1">MRSEPEMMNMLVKFAMNDKRIRLVTMEGSRTNFNVPPDSFQDYDISYFVTDMDSFKESDQWLNVFGDRLMMQKPEDMELFPSELGNWFSYIILFEDGNKLDLTLIPINEVEDYFTNSDGLVEVLLDKDVLIQEEVIANDHQYWIKKPTAREFDDCCNEFWMVSTYIVKGLARKEILFAIDHLNEIARPNLLRMMAWKIGSEQGYTFSVGKNYKFINQYLPNEDWKSLLSTYSENGYQEMWQSLLTCYSLFRTYAKAVASSLKYEYPEYDEAITRYTVNIYNSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH21</accession>
    <name>E3EH21_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidylprolyl isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">coaO</name>
        <name evidence="3" type="ORF">PPSC2_07655</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370208.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1604"/>
    <dbReference type="EnsemblBacteria" id="ADO55581">
        <property type="protein sequence ID" value="ADO55581"/>
        <property type="gene ID" value="PPSC2_07655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1586"/>
    <dbReference type="eggNOG" id="COG4632">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1823459_0_0_9"/>
    <dbReference type="OMA" id="TIENDRT"/>
    <dbReference type="OrthoDB" id="1131748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168953" evidence="1">
        <location>
            <begin position="25"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="59"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="17288" checksum="8CD682EBBB6595E8" modified="2011-01-11" version="1">MMKRFFPVSVFLIFSLVLSVQASATKHPYSYTINVQVNGVPINFGTNSDSPPYIENATNTAFVPLRFVSENLGGRVRDWDKTLQQVTIESKNGTVIKLAIGSKIAYVNDEEKMMLAAPQIPTTRVQVPLRVVSEVLGAKVDTQKIGETLNVNITTSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH22</accession>
    <name>E3EH22_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370209.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1605"/>
    <dbReference type="EnsemblBacteria" id="ADO55582">
        <property type="protein sequence ID" value="ADO55582"/>
        <property type="gene ID" value="PPSC2_07660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1587"/>
    <dbReference type="eggNOG" id="ENOG502ZCVC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_173813_1_0_9"/>
    <dbReference type="OMA" id="MINEWNP"/>
    <dbReference type="OrthoDB" id="1950713at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.340.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023162">
        <property type="entry name" value="Apc36109-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015053">
        <property type="entry name" value="DUF1871"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08958">
        <property type="entry name" value="DUF1871"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116922">
        <property type="entry name" value="SSF116922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9546" checksum="B1F7DE5CE7CE33E4" modified="2011-01-11" version="1">MNNDIVQMINEWNPIEIYPLLEDEYYSEIHKIHEKSKETNSIRELAKQIHSVFAQSFKKEFDKSIEDCQSIAEKIMNITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH52</accession>
    <name>E3EH52_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370239.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1635"/>
    <dbReference type="EnsemblBacteria" id="ADO55612">
        <property type="protein sequence ID" value="ADO55612"/>
        <property type="gene ID" value="PPSC2_07780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1618"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OrthoDB" id="495395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="54674" checksum="4CC7915EF5A74B2C" modified="2011-01-11" version="1">MNITPTIRAELEQFLQQEDLTLSQFGQIAGMNRGIISSIVTGNKSMSINQLDRITEAMGLPEGYFYDLFIDNYIIDTPPNMRRIEPFLYRCAELDKLDAIRRVVGAIMDNLLYSPKLFEIAEGLLAQGRLGAALILYEGVAEAEKYQHSERLAICQYRIFKIQIGDDQSKNLSAATIFEVFVERLNEVDQLDALKDLANVYRSLRKWDKVEEIAKKMRAKAEIQYTLKHKQNSRERDESTKNLTRPLFVYISYADLLCASVCEAQGDYQQALQYTYAYADLEWVKEDDEDTQHWIGLYKQWSEGNTHVNKLLSGDTSVLTEYVEYIASTNVTDKEMVTKLLNVMMAANRYQIDVDNILQRFEVEIDSFTQQGHPSSDMYTNQVIPEQFARLSYELAYYQLHRGTYDDGFKFLMYSMVSYHTLNNETYFINCMGLFLHFRDHAVPEIKVGFLNFIEKVWMNNVEKSGNADHRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHG9</accession>
    <name>E3EHG9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Deoxyuridine 5'-triphosphate nucleotidohydrolase</fullName>
            <shortName evidence="4">dUTPase</shortName>
            <ecNumber evidence="4">3.6.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">dUTP pyrophosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">dut</name>
        <name evidence="6" type="ORF">PPSC2_10145</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>dUTP + H2O = diphosphate + dUMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10248"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61555"/>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <dbReference type="EC" id="3.6.1.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Pyrimidine metabolism; dUMP biosynthesis; dUMP from dCTP (dUTP route): step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the dUTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.23" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370731.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22615"/>
    <dbReference type="EnsemblBacteria" id="ADO56122">
        <property type="protein sequence ID" value="ADO56122"/>
        <property type="gene ID" value="PPSC2_10145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2138"/>
    <dbReference type="eggNOG" id="COG0756">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068508_1_0_9"/>
    <dbReference type="OMA" id="YAAFVHP"/>
    <dbReference type="OrthoDB" id="1669228at2"/>
    <dbReference type="UniPathway" id="UPA00610">
        <property type="reaction ID" value="UER00666"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004170">
        <property type="term" value="F:dUTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006226">
        <property type="term" value="P:dUMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046081">
        <property type="term" value="P:dUTP catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07557">
        <property type="entry name" value="trimeric_dUTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00116">
        <property type="entry name" value="dUTPase_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008181">
        <property type="entry name" value="dUTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029054">
        <property type="entry name" value="dUTPase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036157">
        <property type="entry name" value="dUTPase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033704">
        <property type="entry name" value="dUTPase_trimeric"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11241">
        <property type="entry name" value="PTHR11241"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00692">
        <property type="entry name" value="dUTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51283">
        <property type="entry name" value="SSF51283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00576">
        <property type="entry name" value="dut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 4" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="dUTPase" evidence="5">
        <location>
            <begin position="16"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="68"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="85"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="16174" checksum="B6C31EBF7F2E01FE" modified="2011-01-11" version="1">MLTYVEINRLGGNEDIELPRKMSELASGFDLYAAVQEDLVLEPGKRCLVPTGFAIAMPAGLEAQIRPRSGLALKHGITCLNTPGTIDADYRGEIKVLLINLGEEPFTITRNERIAQMVFQVVPEVELKQVDHLSETVRGAGGFGHTGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH5</accession>
    <name>E3EHH5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9 10">Ribonuclease J</fullName>
            <shortName evidence="9">RNase J</shortName>
            <ecNumber evidence="9 10">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ykqC</name>
        <name evidence="9" type="synonym">rnj</name>
        <name evidence="13" type="ORF">PPSC2_10175</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10">Binds 2 Zn(2+) ions per subunit. It is not clear if Zn(2+) or Mg(2+) is physiologically important.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer, may be a subunit of the RNA degradosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9 10">Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="9 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370737.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22645"/>
    <dbReference type="EnsemblBacteria" id="ADO56128">
        <property type="protein sequence ID" value="ADO56128"/>
        <property type="gene ID" value="PPSC2_10175"/>
    </dbReference>
    <dbReference type="GeneID" id="66577880"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2144"/>
    <dbReference type="eggNOG" id="COG0595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008727_3_2_9"/>
    <dbReference type="OMA" id="EYRMLIK"/>
    <dbReference type="OrthoDB" id="580619at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004534">
        <property type="term" value="F:5'-3' exoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004521">
        <property type="term" value="F:endoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01491">
        <property type="entry name" value="RNase_J_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011108">
        <property type="entry name" value="RMMBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004613">
        <property type="entry name" value="RNase_J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042173">
        <property type="entry name" value="RNase_J_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030854">
        <property type="entry name" value="RNase_J_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041636">
        <property type="entry name" value="RNase_J_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001587">
        <property type="entry name" value="RNase_J_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07521">
        <property type="entry name" value="RMMBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17770">
        <property type="entry name" value="RNase_J_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004803">
        <property type="entry name" value="RnjA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00649">
        <property type="entry name" value="MG423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01292">
        <property type="entry name" value="UPF0036"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 9 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7 9" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="5 9 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 9 10" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9 10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="9" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Lactamase_B" evidence="12">
        <location>
            <begin position="22"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9 11">
        <location>
            <begin position="368"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR004803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR004803-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO56128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="559" mass="61013" checksum="4624A3F996492DF8" modified="2011-01-11" version="1">MSKKTNNDKLMIFALGGVGEIGKNMYVVQYGNDIVVVDSGLKFPEEDMLGIDIVIPDISYLTENRDKVRGIVLTHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLVENKLKEANLLGETKRILINADSEIKLGSTLKVTFFKTNHSIPDSVGVCIDTPEGAVVHTGDFKFDHTPVNGQYADLQRMAEIGTRGVLALLSDSTNAEKPGFTPSEKSVGIVLEDIFRKSRQRVVVATFASNVHRIQQVINAAEATGRKVTVIGRSMVNVVGIASDLGYLEIPDGMLIEPEEVGKMSADRVVILCTGSQGEPMSALTRMARSTHRKVDILPGDSVIIAATPVPGNEKYVGRTIDELFRLGANVYYSAANPGIHVSGHGSQEELKLMLNLMKPKFFLPIHGEFRMQRRHALLAEGVGIEPENIFITDIGEVIEIQNGGARRAGKVTAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQDGTIKSGPDIISRGFVYVRESEGLLDEANRIVSSTLHKLMSENVNEWASLKTNVKDALGRFLYEQTRRRPMILPIIMEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI13</accession>
    <name>E3EI13_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yddS</name>
        <name evidence="1" type="ORF">PPSC2_12350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371206.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2633"/>
    <dbReference type="EnsemblBacteria" id="ADO56602">
        <property type="protein sequence ID" value="ADO56602"/>
        <property type="gene ID" value="PPSC2_12350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2620"/>
    <dbReference type="HOGENOM" id="CLU_3010026_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="56" mass="6002" checksum="95CBF02CCBC77DB6" modified="2011-01-11" version="1">MVETIPENKQTSVQIPPSIMEYMESPLKHLQLHARTMKVVVASQICGGAGLAAGIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI43</accession>
    <name>E3EI43_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yfmO</name>
        <name evidence="9" type="ORF">PPSC2_03665</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369347.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16490"/>
    <dbReference type="EnsemblBacteria" id="ADO54711">
        <property type="protein sequence ID" value="ADO54711"/>
        <property type="gene ID" value="PPSC2_03665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.721"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033995_0_0_9"/>
    <dbReference type="OMA" id="WAVAFAC"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="23"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="147"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="177"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="216"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="251"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="277"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="309"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="344"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="373"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="23"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="403" mass="42484" checksum="CDE56DA0577955D2" modified="2011-01-11" version="1">MSSQHALPEELKERSGFLSQPKAVWAVAFACVISFMGLGLVDPILPAIADQLHATKSQVSLLFTSYNLVTGVAMLITGVVSSRLGVKWTLLTGILFIIVFAGLGGTANTVGGIVGYRAGWGLGNALFIATALSAIVGLSTSGTAKAIILYEAALGLGISVGPLLGGELGSISWRGPFFGVAGLMVVGFLFITFMLPSIPKPKKRGSIADPFKALSYPALLTLGIVALLYNFGFFTLMAYSPYVMHLDEHGLGYVFFGWGIMLAFTSVFVAPKIQARLSVVSSISIMLTLFAIDLGVMAIGTVAGSPTTVIVAVIVAGIFLGINNTLITTAVMQAAPVERSTASAAYSFMRFLGGAISPWLAGKLSEWYSAETPFYFGALMVLIGVAVLIVRRRHMQDIQVDAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EID9</accession>
    <name>E3EID9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369883.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55252">
        <property type="protein sequence ID" value="ADO55252"/>
        <property type="gene ID" value="PPSC2_06140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1260"/>
    <dbReference type="eggNOG" id="ENOG5034AJJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_768722_0_0_9"/>
    <dbReference type="OMA" id="QHITVIN"/>
    <dbReference type="OrthoDB" id="2149592at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="359" mass="41808" checksum="ACA3EA8706FF9695" modified="2011-01-11" version="1">MLVRVFLKRWYSIFLYFVSLVFISIYIFKGICGMNYPPNSRDTIELISWLFSGVVSIISFLSIFVGFVYDNKLINASSSLKQIYKPYGLEFENYQTTLIDYQQYVSKGLTLNSIYWVILVTSNLSIIIWLISLEIVNNIFPISFNFNNITNIFLFIMWLIFSFLLTFLVFYLNRIKNNKDPLGKGYLPKPNQLLDMNFLVTQDVDMDEIIQKALPIVELYSNPEPQNNYEMNLVFPLPISNYKYVIKIYDINKRLLLRCFGYYELQSSFGKRQHITVINNMSDSIYNLIDENASAEIKVYSAFDNSLLGRMSLSFQVTSSKKNSQIERSISHLIARDIDQGLITIINNSFHSCQVENGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIS5</accession>
    <name>E3EIS5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_09315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370561.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1972"/>
    <dbReference type="EnsemblBacteria" id="ADO55944">
        <property type="protein sequence ID" value="ADO55944"/>
        <property type="gene ID" value="PPSC2_09315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1962"/>
    <dbReference type="eggNOG" id="ENOG5032T7R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_138370_0_0_9"/>
    <dbReference type="OMA" id="DFGMIVI"/>
    <dbReference type="OrthoDB" id="1917919at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019635">
        <property type="entry name" value="DUF2500"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10694">
        <property type="entry name" value="DUF2500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="13486" checksum="F8B89A278E9371CB" modified="2011-01-11" version="1">MESGFFMEFQSFNMIFFIVFGLIAIVIITGIVKTIGAGLSNQAAEQVQRSCKVVDKRTRVRGGSGDFSASTDYYITFEFEGGERKELKVKGSDFGMIVIGDRGEVHYKGTRFLEFVRLMGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIV2</accession>
    <name>E3EIV2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yoaH</name>
        <name evidence="7" type="ORF">PPSC2_09430</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370588.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21900"/>
    <dbReference type="EnsemblBacteria" id="ADO55971">
        <property type="protein sequence ID" value="ADO55971"/>
        <property type="gene ID" value="PPSC2_09430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1989"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_27_9"/>
    <dbReference type="OMA" id="MIASSYN"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="192"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="213"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="286"/>
            <end position="522"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="572" mass="62637" checksum="45C0B633538A0835" modified="2011-01-11" version="1">MNLTIKAKMILSAILIPSVIAAMLLTNYILSIHSENEYKDIMNREETIAYNSKSLQFLLNGISNDERAYLLTRDEQYGNEIGNKQSEVAKLLQETEALLNTGNEDTKKKMTDLKTGINTYMNQVHTLLTTAGYKSTRDDAFPPFSELLDDFENERVLRKQLDTKVVAFVKAQEDMVTVKIQQAHQTMTNTTLITSIVGLLVIIYSIAQSIVLIRSIRPLHHMNEQLLQMSQGGGDLRSRLDITSKDEIGMIASSYNKLIEGFRNIIVDAQDTARTLTVTAERVNVSTEEMNQANRHTSGVMEELATGMEHQVDDITQTTDTIKELANELERIAATSEQVYELSDTAAKDAEAGEQSIGKAMRQMEKVSESVDSSARAVRSLSEQAEQIGMIGSVITGFAKQTGMLALNASIEAARAGEQGKGFAVVASEVRRLSEQVSVSAAEITQFVQNIQEHVGHVASTMQSGTVEVQSGVKVMQSAETAFRQIGSSIQQVSEQIHSVNRSVEQMSGGSERMVKAAERIREVAEQTAGGTQSVSAAAEEQLASMEEIASSIHTVADMSQLLNARVGGFKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIZ0</accession>
    <name>E3EIZ0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Small ribosomal subunit biogenesis GTPase RsgA</fullName>
            <ecNumber evidence="3">3.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yloQ1</name>
        <name evidence="3" type="synonym">rsgA</name>
        <name evidence="7" type="ORF">PPSC2_10370</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370778.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22840"/>
    <dbReference type="EnsemblBacteria" id="ADO56171">
        <property type="protein sequence ID" value="ADO56171"/>
        <property type="gene ID" value="PPSC2_10370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2185"/>
    <dbReference type="eggNOG" id="COG1162">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033617_0_1_9"/>
    <dbReference type="OMA" id="MQRELEY"/>
    <dbReference type="OrthoDB" id="908180at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01854">
        <property type="entry name" value="YjeQ_EngC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01820">
        <property type="entry name" value="GTPase_RsgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030378">
        <property type="entry name" value="G_CP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004881">
        <property type="entry name" value="Ribosome_biogen_GTPase_RsgA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010914">
        <property type="entry name" value="RsgA_GTPase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32120">
        <property type="entry name" value="PTHR32120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03193">
        <property type="entry name" value="RsgA_GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00157">
        <property type="entry name" value="TIGR00157"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50936">
        <property type="entry name" value="ENGC_GTPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51721">
        <property type="entry name" value="G_CP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CP-type G" evidence="6">
        <location>
            <begin position="112"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="ENGC_GTPASE" evidence="5">
        <location>
            <begin position="118"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="320"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="157"/>
            <end position="160"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="209"/>
            <end position="217"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="290"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="295"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="303"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="365" mass="41093" checksum="19F42A77AC20B071" modified="2011-01-11" version="1">MSIHEYGWSDYWNGFWDQWKQSYEERAGNTQIRPARLIADYGQKVKLITMDGERWGAASGKLRHAMVDPAEMPAVGDWVAITTSDEVSDAVIHAVLPRKSQISRQAAGFETKEQLIATNVDTLFLVNALNHDFNMRRLERYLIMAWNSGVNPVVVLSKSDLCDDVEQRVAEAEGVAPGVPVIVISALQNEGREQLEAFLQPGCTVALTGSSGSGKSTIVNWLSGAEVQLTQDVREEDSRGRHTTTHRQLFPIAKQAVLLDTPGMRELNLWDDSKGVAHTFADIMETAQQCRFADCKHKGEAGCAVEEAIQKGELSESRVNNYRKMQRELEYQARKEADRRRKDSRSSTTPGRKDQRSGWRRDVEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ60</accession>
    <name>E3EJ60_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-carboxymuconate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykgB3</name>
        <name evidence="2" type="ORF">PPSC2_10670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cycloisomerase 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370847.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23065"/>
    <dbReference type="EnsemblBacteria" id="ADO56241">
        <property type="protein sequence ID" value="ADO56241"/>
        <property type="gene ID" value="PPSC2_10670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2257"/>
    <dbReference type="eggNOG" id="COG2706">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038716_5_1_9"/>
    <dbReference type="OMA" id="NGPHAHM"/>
    <dbReference type="OrthoDB" id="302683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011048">
        <property type="entry name" value="Haem_d1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019405">
        <property type="entry name" value="Lactonase_7-beta_prop"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10282">
        <property type="entry name" value="Lactonase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51004">
        <property type="entry name" value="SSF51004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="363" mass="39486" checksum="E78CEB9420520D7C" modified="2011-01-11" version="1">MTAQQKLLVFAGSYAELEGNGVYSYTFNEQTGALTLQDEFSGLKNPTFLNVDVKNRKLYSIGETTSAAGAKVGEASAFEIDPVKGTFTLLNRAENVGSTTCHIQRDPSDRYLIVVSYHGGMVGLISLTEDGRIGELLDVKQHEGKGAHPERQDRPHPHSSFFSPDGRFLFVQDLGLDLIRIYTIDDSKGQLVLHGETKTHAGAGPRHLTFHPNGKFAFVINEVDSSITSFAYDAEAGKLTELESVPTLPSDFTGENTTAEIAISQDGAYLYGSNRGHDSIVVYAVDGATGKLSLVEHVSAEGEHPRHFALTPNGDYMLVANRDTNNIVTFKVDKASGRLTYTGQQVTVSKPVCVQPFYFSVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ68</accession>
    <name>E3EJ68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cheY3</name>
        <name evidence="3" type="ORF">PPSC2_11195</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56355.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599711.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23580"/>
    <dbReference type="EnsemblBacteria" id="ADO56355">
        <property type="protein sequence ID" value="ADO56355"/>
        <property type="gene ID" value="PPSC2_11195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2370"/>
    <dbReference type="eggNOG" id="COG2204">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_69_15_9"/>
    <dbReference type="OrthoDB" id="1630092at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="3"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56355.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="13325" checksum="291E31DEFEF26BAD" modified="2015-05-27" version="2">MATVIIVDDSLFMRSVLKDILLDLGHSVIAEAENGYDAVLKYAHFRPDLITMDINMPKMDGLEAVKKIVELDPKANILMCSALGQQEAIIQAFKAGAKDFIVKPFEMERVVNAVTKMLDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ78</accession>
    <name>E3EJ78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase family 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rfbC1</name>
        <name evidence="2" type="ORF">PPSC2_11260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370970.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2393"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56365">
        <property type="protein sequence ID" value="ADO56365"/>
        <property type="gene ID" value="PPSC2_11260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2382"/>
    <dbReference type="eggNOG" id="COG0463">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040521_0_0_9"/>
    <dbReference type="OMA" id="IRWWPME"/>
    <dbReference type="OrthoDB" id="144884at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="126"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="509" mass="59596" checksum="4DA9627BF7927090" modified="2011-01-11" version="1">MSLNFTPLLTAHLFVSKKVLKDHVKELIDRLEENHITINLYEADQPLIDNSLQKPRVYVSLGEEWGEFSALKALPGHEKKRWLHFQSPDEIQPMHLFFCWLKATDPLPENRTIPPTQFSSNTPLISVFTASYRSKEKIQRPYQSLLKQTYKNWEWVIVDDSGDEDETYKEYLLPLEDHRVRRYRQDSRNGYIGAIKRFAAGLCTGEILVEVDHDDELTPDCLEKIVKAFQQNPDCGFVYGDCAEVYAGSNHAHWYGWDCGFGYSVHYRVWLHDMNRWQNVQKHTTINGKTIRHLVGLPNHPRAWTRDCYHLIGGHRNELLVADDYDMLVRTFLCTKFVNIPDLIYIQYRNEQGNNTTFLRNKQIQILVGELYRSNFQRIQMRLKEFDLPQLLPYRRIWETSTDDPARKSAHVIQEDTSRFSILFPIPHSCPEIEHTQLNKTLQKGIENNFREIEIVVVGRIPSEIETYASKAPRGAIRWWPMEPNDSLETCIQYAKFVASCKEKVVVLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ79</accession>
    <name>E3EJ79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase family 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370971.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2394"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56366">
        <property type="protein sequence ID" value="ADO56366"/>
        <property type="gene ID" value="PPSC2_11265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2383"/>
    <dbReference type="eggNOG" id="COG1215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025996_0_4_9"/>
    <dbReference type="OMA" id="LCAFRIS"/>
    <dbReference type="OrthoDB" id="865276at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="7"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="33611" checksum="6B78686E82637A39" modified="2011-01-11" version="1">MQCPLVSVVIPAYNRPHTLKIAIDSVLEQTYPNIEIIICDDSTTNEVQEMLDSYLDSFPQIKYYKNDKNLFLENWHKCFDLASGEYINYLMDDDMFQKEKIARMIYFFENFENITLVTSYRQTMDESGTILPPLYATERLYEETRIMDGRMLANVALTRCLNVIGEPTTVFFKKADLIERFGVYKGKQYSLLNDLASWLNLLSKGKAVYIPEALSYFRIHPNQNNQTLGQNAFTEWLDIMIASRDDGFLDTDDLFKTALHAYQERIRGRPQFVADIERIEMILKTLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJB4</accession>
    <name>E3EJB4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yrxA</name>
        <name evidence="4" type="ORF">PPSC2_11420</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371006.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23790"/>
    <dbReference type="EnsemblBacteria" id="ADO56401">
        <property type="protein sequence ID" value="ADO56401"/>
        <property type="gene ID" value="PPSC2_11420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2416"/>
    <dbReference type="eggNOG" id="COG1827">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108798_0_0_9"/>
    <dbReference type="OMA" id="HTPEQTK"/>
    <dbReference type="OrthoDB" id="1652220at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036094">
        <property type="term" value="F:small molecule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1340.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035922">
        <property type="entry name" value="3H_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004173">
        <property type="entry name" value="3H_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026043">
        <property type="entry name" value="NadR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40068">
        <property type="entry name" value="PTHR40068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02829">
        <property type="entry name" value="3H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037847">
        <property type="entry name" value="NiaR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75500">
        <property type="entry name" value="SSF75500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0533">Nickel</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_11" evidence="3">
        <location>
            <begin position="12"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="3H" evidence="2">
        <location>
            <begin position="80"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="153"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR037847-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="19834" checksum="65FD330C58351351" modified="2011-01-11" version="1">MTESSKRSGTDRREQLLLWLKSESPLTGSELARRSSVSRQVIVQDISLLKASQEPILATSQGYIYMEPTAQVAPLASRIIVCNHRPEQTEEELKLIVDYGVSVQDVIVEHPVYGDLTAPIRVGTRKEVDDFIRKISSTQATYLSQLTGGIHLHTLHASDENKINDACAALEQAGFLMTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJJ1</accession>
    <name>E3EJJ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">oxyR1</name>
        <name evidence="3" type="ORF">PPSC2_12090</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371145.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24420"/>
    <dbReference type="EnsemblBacteria" id="ADO56541">
        <property type="protein sequence ID" value="ADO56541"/>
        <property type="gene ID" value="PPSC2_12090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2557"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="EWFVGVK"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="33494" checksum="6751F974D2ADBB06" modified="2011-01-11" version="1">MELLQLQYFLTVAHLEHVTEAARSLHVTQSSLSKTIQRLEEDLGVPLFDRTGRKLRLNEFGSRFLYRAERALFELEQGKQELSDLSSPEHGTLELAVTTASTLPGILREFRRKRPYIQFHVQMLTTQEMVTLLHRGEVDFCLSSPPVEGDDIECKIVCIDPILVAVPKGHRLADRNSVSLTELREEWFVGVKRGYGTRDLVDSVCMSEGFVPNYVYEGDEPARLSTLVEAEIGIAFIPSTARNSQEHLKYLQVENHELIREIALLWNRNRYISRAAQEFREIVVEYFATNSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJK6</accession>
    <name>E3EJK6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Fucose permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">glcP3</name>
        <name evidence="9" type="ORF">PPSC2_12160</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371160.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24510"/>
    <dbReference type="EnsemblBacteria" id="ADO56556">
        <property type="protein sequence ID" value="ADO56556"/>
        <property type="gene ID" value="PPSC2_12160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2571"/>
    <dbReference type="eggNOG" id="COG0738">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058035_0_0_9"/>
    <dbReference type="OMA" id="RFGFVLM"/>
    <dbReference type="OrthoDB" id="1121832at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
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        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="94"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="157"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="207"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="242"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="275"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="300"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="335"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="362"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="4"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="402" mass="44025" checksum="D6A26B83E5FCFFCA" modified="2011-01-11" version="1">MKRLFALSCAFYLLIGVTSVVLGALLPTLLPHYGRGYSDGGLLLFLQFFGFLVGVLLTPFMALHMGRKSMLAIALGSIVIACTILGVLPSWNWVIAMAIWIGFGSGIIESSIGAFTIEFTEEQKAVAMSKLDVYFALGALLMPAIVSLYIWFGIWNLTFYTISLLTFILLLFWLTMPVSASSHLTQADIRTTERSVEQARYSGQHRVLLGIFIIFFFVYMGLELGLMNFLPSILTETLQLQGSVASLGVSVLWIAMIIGRMFSGRIAESAGYIPFLLWSAIGTFCFLVAMVFISSQWATYLLIFGAGIFMSGLFCIALVYANVMIPGMTERTTSILIASGGIGGSVLQYVIGWSMSEWPVAASLWILGGFTLILLLALILTHLWNNRGSRVVDSLAHQSKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJL3</accession>
    <name>E3EJL3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydrodipicolinate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dapA5</name>
        <name evidence="2" type="ORF">PPSC2_12195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DapA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56563.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24550"/>
    <dbReference type="EnsemblBacteria" id="ADO56563">
        <property type="protein sequence ID" value="ADO56563"/>
        <property type="gene ID" value="PPSC2_12195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12195"/>
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    <dbReference type="eggNOG" id="COG0329">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
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    <dbReference type="OMA" id="YDNPGTT"/>
    <dbReference type="OrthoDB" id="1438588at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002220">
        <property type="entry name" value="DapA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12128">
        <property type="entry name" value="PTHR12128"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00146">
        <property type="entry name" value="DHPICSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01130">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR001365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="31702" checksum="F8D02159A6F986B4" modified="2011-01-11" version="1">MFHGLSAFPLTPVNETGIDEKAFVTLIQRLVAAGVDSIGTLGSTGNYAYLNREERLRVLQLAVHSAEGIPVMTSISAIRTLEVLRLAEDAQRAGASAVLLAPISYQALTNEEVFSLYEQVTSSLSIPLCVYDNPGTSHFHFSDELHGRISELPNVGSIKIPGVPTDPEAAKTRIKKLRGSIPPHVTIGVSGDSFAVTGLNAGCEAWFSVLGGLFPQACLNMTRLAQDGFADEAERLSALLEPIWTLFHQYGSLRVVSAAAEISGLITSPSLPLPLQPLNPSAREYLKLILNNLQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJV2</accession>
    <name>E3EJV2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386114.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59700">
        <property type="protein sequence ID" value="ADO59700"/>
        <property type="gene ID" value="PPSC2_26635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5625"/>
    <dbReference type="HOGENOM" id="CLU_1775633_0_0_9"/>
    <dbReference type="OrthoDB" id="2220048at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="17543" checksum="111FD62C638AAF0C" modified="2011-01-11" version="1">MSTNYYFRNKEEYLKINQINQLVQNKIKDIINEIGSMVRDEDEVQEIKHKIEQATYMECSLIHIGKRSIGWKPLFKVQKEFSTMNHLQTFYLENKDKYEIVNEYGEVVGWKDIKTELIAWKGERIHRGSDILYDEDGYQWAVHEFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJY2</accession>
    <name>E3EJY2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386415.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0612"/>
    <dbReference type="EnsemblBacteria" id="ADO60001">
        <property type="protein sequence ID" value="ADO60001"/>
        <property type="gene ID" value="PPSC2_28175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5975"/>
    <dbReference type="HOGENOM" id="CLU_1665845_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="17297" checksum="63125F7E243A86D8" modified="2011-01-11" version="1">MKTQKTDWTVIKEAEEQGMMVAMTYLVERNRTALNEELSRYFKEKLPSYKSLFEDEEGEEVLISLNEYLEESMSGMHELDFPLHSGEDVYLIPINEHIQLKILIADQYHGDGEYSKYVCMDFFLIDEQATKEDVDVLIEVIQKYFCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK76</accession>
    <name>E3EK76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386199.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0395"/>
    <dbReference type="EnsemblBacteria" id="ADO59785">
        <property type="protein sequence ID" value="ADO59785"/>
        <property type="gene ID" value="PPSC2_26235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5524"/>
    <dbReference type="HOGENOM" id="CLU_2013026_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="47"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="13915" checksum="21C285C92E3197E4" modified="2011-01-11" version="1">MSECNSKLVSGECFGYAPRIGITYAQTKDGHKFDANEVVMPIIIRVMEEKDREIAALTEELECFRAKTAPESLGYGAKWKQKAMKARDERNKLREALEEIADTKNDMAGVYCRLTARHALGRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKB4</accession>
    <name>E3EKB4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Exonuclease domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385855.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0047"/>
    <dbReference type="EnsemblBacteria" id="ADO59441">
        <property type="protein sequence ID" value="ADO59441"/>
        <property type="gene ID" value="PPSC2_27855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5903"/>
    <dbReference type="eggNOG" id="COG2176">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_976093_0_0_9"/>
    <dbReference type="OrthoDB" id="764040at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006054">
        <property type="entry name" value="DnaQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00573">
        <property type="entry name" value="dnaq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exonuclease" evidence="1">
        <location>
            <begin position="25"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="35472" checksum="0C2DCF13B5641CEA" modified="2011-01-11" version="1">MAVSKKTNGNEKALEMNEIILRSNLYVVADIETTGFSPAKGGRIIEVAGVKIENGKIVDEFNQLINPEQKIYPKITELTGITNEMVSGKPVFGQVLPEFYRFIGDAVFVAHNKSFDWDRYLLHYFEKVGIIADNASICTKILAKMYRPNLPAYGLEDICKDAGVQITNHHRALDDSIALAHVFLRYLNTYAPLYQPLPVLNAPIQPDLFSLPLDKPKMNHEVPSAIAKEGSYKIKRVSYWEKDITKQRKMQRIYVLTTMGSVYFDIPTKSWYNKDVKSSLNFKEIEQKVLSYLKLHSNDELCQYRNGRVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKC1</accession>
    <name>E3EKC1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3'-5' exonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385862.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0054"/>
    <dbReference type="EnsemblBacteria" id="ADO59448">
        <property type="protein sequence ID" value="ADO59448"/>
        <property type="gene ID" value="PPSC2_27820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5896"/>
    <dbReference type="eggNOG" id="COG5018">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037266_5_1_9"/>
    <dbReference type="OMA" id="GVECPCM"/>
    <dbReference type="OrthoDB" id="1985371at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exonuclease" evidence="1">
        <location>
            <begin position="2"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="22341" checksum="20DE64FC0056E06E" modified="2011-01-11" version="1">MNYIIVDLEATCWENDRSKRNEIIEIGAVKLDDHLNVVSEFQAFVKPKLYPQLSEFCMQLTSIEQHDVDHAATFETVLEDFQSWMGSNYWLCSWGYYDKKQLKSDCDLHKQPTSWLRNHISIKHQHGAILKEKLENAGASKSEVKRVEHGVGMEKALKILKIPLEGTHHRGIDDARNIAKIFVAIFDDLKFKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKE5</accession>
    <name>E3EKE5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385886.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0078"/>
    <dbReference type="EnsemblBacteria" id="ADO59472">
        <property type="protein sequence ID" value="ADO59472"/>
        <property type="gene ID" value="PPSC2_27710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5871"/>
    <dbReference type="HOGENOM" id="CLU_2247367_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="104" mass="11824" checksum="B2198ED8A90DBDE1" modified="2011-01-11" version="1">MNERLMKWYVAKKSEQAIAKMPHQCKDCNQVDLAVRQVSTLYLLGYILAGVVVGYWIAWILGFLVTLICFFVNVNVAKKRCKHCGSTKVHLHHIKNKVSSSECA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKT3</accession>
    <name>E3EKT3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385948.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59534">
        <property type="protein sequence ID" value="ADO59534"/>
        <property type="gene ID" value="PPSC2_27420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5804"/>
    <dbReference type="HOGENOM" id="CLU_2551371_0_0_9"/>
    <dbReference type="OrthoDB" id="2196756at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="81" mass="9283" checksum="861F7C057E3E7F21" modified="2011-01-11" version="1">MSNTDFNLTRGTKQLIKSAINETQSNNRYVLCAKIADNVVSKYNGLNLDYQLKRMGLQTTGQILEAIDTFFFKHMSHKPQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL56</accession>
    <name>E3EL56_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_27055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386032.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0225"/>
    <dbReference type="EnsemblBacteria" id="ADO59618">
        <property type="protein sequence ID" value="ADO59618"/>
        <property type="gene ID" value="PPSC2_27055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5721"/>
    <dbReference type="HOGENOM" id="CLU_902672_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169039" evidence="1">
        <location>
            <begin position="23"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="308" mass="35603" checksum="425D21C56AC290D2" modified="2011-01-11" version="1">MLKRIWLGVFLISIFLSLVACAKEPFTKEEEKTFMNEYMDMATKPSEPQVLEAKMKPNLDRLSKEGSSNAIDGLLYAMYQKLPTLTSKAEGLHDVMAAAKAKKIDLNQTEDAKKIEDQTLKAFVGEVLKDHFYFVEENGRITVQPNMSYMLKNYEAYMTDSLKATIQFSEDEFEHPFYDADTQKFNLDIVAKRILLLEDNLKKYANTYYAETFKKSKEYYYQIYFGMNNEFLVDSKKFVLKEVIDHYQRTSKEYPQSQLSKDILAYLGKLKISHNQVTDDIQVFLTGIANVQTVDVVNDGSTLKKNTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC09</accession>
    <name>A0A0D5ZC09_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bag</name>
        <name evidence="2" type="ORF">PPSC2_00600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599361.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0121"/>
    <dbReference type="EnsemblBacteria" id="AKA44173">
        <property type="protein sequence ID" value="AKA44173"/>
        <property type="gene ID" value="PPSC2_00600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.118"/>
    <dbReference type="HOGENOM" id="CLU_110161_2_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="16785" checksum="64D50E0C5EB01357" modified="2015-05-27" version="1">MSLLPQVPFGTQPGTPGPFTPSGPSIPQFPDIQDSFPSPVGPPPGPGPFSPQPFSPPPQGPFGPQGGQQAQAPTSPPPQFTPPKPLVSAYAVDPGAIFGCLYRNTFVWLTNGERFWMYPVFVGRTSVAGFRWSGRFWFYYGVDTNRIESFSCFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC79</accession>
    <name>A0A0D5ZC79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886217.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0415"/>
    <dbReference type="EnsemblBacteria" id="AKA44345">
        <property type="protein sequence ID" value="AKA44345"/>
        <property type="gene ID" value="PPSC2_26140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5504"/>
    <dbReference type="HOGENOM" id="CLU_1466855_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="21985" checksum="F29314150F38CF3B" modified="2015-05-27" version="1">MTTLTRVFGILRAYKNNFLSNLLTTNNVYVDEFHGFNNIRGLRDLLRKKSLRSDIMIGFMSTPFLEREIDIEHLLTFVDLENLINNHMQYIERSYEKKLRLNNSFTVEFEKYDCVWIVVQEASGRELLNIRYAHITDQFEVVDYTFPNSYLRFDLKHREELKGLLKAIRSKFKQKIVFDEVGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCD2</accession>
    <name>A0A0D5ZCD2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_09785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040101580.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44226">
        <property type="protein sequence ID" value="AKA44226"/>
        <property type="gene ID" value="PPSC2_09785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2062"/>
    <dbReference type="HOGENOM" id="CLU_2168485_0_0_9"/>
    <dbReference type="OrthoDB" id="2099547at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="12031" checksum="8D31E7E1AD7A65C4" modified="2015-05-27" version="1">MGKVNSSRKILKPTRRLRTKAGTAFIFNISNVGPFLFQRRLNLTGFVNSSSRVLVSISEIGIFSGQVKPFQGDATMTIHNVVPNDDGIVIVRGNTGWGSPLNIRLSVVVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCQ1</accession>
    <name>A0A0D5ZCQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44398">
        <property type="protein sequence ID" value="AKA44398"/>
        <property type="gene ID" value="PPSC2_28405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6025"/>
    <dbReference type="HOGENOM" id="CLU_2118661_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="13755" checksum="413EA5DC88B1C379" modified="2015-05-27" version="1">MGKCDFCDAEERYLKPLHDKYGDHILDRCFYGCEEERSIPKERKENFELLSIEETYRSQCHESKWEVSIKLNDKTLTIHLTRLNSETEAGLRREILQCRNRHEINRLNLIIFHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCS7</accession>
    <name>A0A0D5ZCS7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44361">
        <property type="protein sequence ID" value="AKA44361"/>
        <property type="gene ID" value="PPSC2_26745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5653"/>
    <dbReference type="HOGENOM" id="CLU_1584883_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="20133" checksum="6D9F73B88EA06E3B" modified="2015-05-27" version="1">MRKIQEASYLLFLLSNAAFGEEMSLQINERDVNLSPISRSMCLIANEVFKVEIPFTADLGTYHFLKRQTRSSVLFKSFEPYIRSNYNRKEHIRYVFLNVTYNNLSELGTILRRVAIYTGRDYAELKYQYEKFLVKHLIRNELQAHEQLIFFNRVNYRDFLMPQFECCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZD04</accession>
    <name>A0A0D5ZD04_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44402">
        <property type="protein sequence ID" value="AKA44402"/>
        <property type="gene ID" value="PPSC2_28695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6089"/>
    <dbReference type="HOGENOM" id="CLU_2634785_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8632" checksum="B20A723102BBD4F8" modified="2015-05-27" version="1">MTIEVDSKLIIGINRSLNSRLENKSELCFECGSQLDECCKNNVIQGSNKKTIYGYLCCSCKSENEALDDDLANDFNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E510</accession>
    <name>E3E510_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">DODA</name>
        <name evidence="6" type="ORF">PPSC2_15255</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DODA-type extradiol aromatic ring-opening dioxygenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371808.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3259"/>
    <dbReference type="EnsemblBacteria" id="ADO57218">
        <property type="protein sequence ID" value="ADO57218"/>
        <property type="gene ID" value="PPSC2_15255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3257"/>
    <dbReference type="eggNOG" id="COG3384">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046582_2_1_9"/>
    <dbReference type="OMA" id="RTEHFAP"/>
    <dbReference type="OrthoDB" id="1728007at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008198">
        <property type="term" value="F:ferrous iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016701">
        <property type="term" value="F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07363">
        <property type="entry name" value="45_DOPA_Dioxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014436">
        <property type="entry name" value="Extradiol_dOase_DODA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004183">
        <property type="entry name" value="Xdiol_dOase_suB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02900">
        <property type="entry name" value="LigB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006157">
        <property type="entry name" value="Doxgns_DODA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LigB" evidence="5">
        <location>
            <begin position="4"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="28795" checksum="0A7BB2037D7B0861" modified="2011-01-11" version="1">MVPSLFLAHGSPMLAIEQTDYTAFLEQLGKSVHPKAIVIFTAHWETQVLTISSMDDIYDTLYDFGGFPPELYEVKYPAHGSIELANKLKKLYEQKGIDVQTDRVRGLDHGSWTLLHRMYPEADIPVVQISVNPYLSPKAQFAIGDVLRELGEQDILVIGSGVTVHNLRIVKWGETKTEPWAIDFDDWIIEKVQSGDIEALDHYESEAPYARQAVPRAEHFVPLFIAMGSGNPANKAKVIHRSYEMGNLSYLCFQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5P8</accession>
    <name>E3E5P8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4183 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372504.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57925">
        <property type="protein sequence ID" value="ADO57925"/>
        <property type="gene ID" value="PPSC2_18535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3972"/>
    <dbReference type="eggNOG" id="ENOG50326J3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_154563_0_0_9"/>
    <dbReference type="OMA" id="IIKPVYT"/>
    <dbReference type="OrthoDB" id="1955659at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025237">
        <property type="entry name" value="DUF4183"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13799">
        <property type="entry name" value="DUF4183"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4183" evidence="1">
        <location>
            <begin position="42"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="13766" checksum="B4C51A0D6A41B509" modified="2011-01-11" version="1">MPIIKPVYTAVATAPVATGGAISTTVTPAVTRFFATITAGMIGATTTTIPAASFVDDADAPVVALPTLTATDSANYYINGVIQQSSLFTLTTASLVIASVDITPGVPAVIEISDFSGTTSTITTQPTISAPTVTIIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Q5</accession>
    <name>E3E5Q5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372511.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05790"/>
    <dbReference type="EnsemblBacteria" id="ADO57932">
        <property type="protein sequence ID" value="ADO57932"/>
        <property type="gene ID" value="PPSC2_18570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3979"/>
    <dbReference type="eggNOG" id="COG4372">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_227882_0_0_9"/>
    <dbReference type="OMA" id="SIESKHL"/>
    <dbReference type="OrthoDB" id="96881at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="80"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="95"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="2254" mass="236835" checksum="9C961C338DC6D236" modified="2011-01-11" version="1">MKNKSRKTNRNKKPLYRVIDPDMNELSMIQRSKPLPAERETEARLHQVASPPPPTTEESELQTVIEPEVEALHEKEIEVADVEETPAFMEEPPLPELEPEQELDPEPEPEPEPEPDPIDVEEILNNKKAPHVNNAFIYTDDLSDFAVTGEKIAPASIDSSKLKQESIQTEFLADYAVHTIKIADGAVTASKIAPDSITVEHLSDASVAGSKLQDRSISGEKLRDGSITPEKLADKIISGDHIANGSIESRHFKQWIVSSDMLQDQSVTSDKIRSGTIQSNNLANEAVDSSKLGDQSVTTSKLRDGAVDGTKIQAGSIESAHLTEHAVHARHLAPGSINRKQLSDGLVGREQLEEGVVSGRHLESEAVTSTHIQAGAIERKHLSPGSIGEEQLGTGQVTARHIADRSIQSNKLADQSVGSLQIVDQSVTSSKISDQSILPHKIADEAVLTRHIATAAIQGPQISPEAVSSVHLQSEIIRKDHIAPEAVTEQHLHSGAVTSEKIGKGAVLDHHVANQAIKENHIASSAIKSDKIADEAVIETKIGTGAVTGNKVASQAITHVHIATGVIRENHLADNSVGGKALQAQSVDSAHLAQSSVQSKHLGEDSVGTAALQEQSVTADILGEGAVHTAHLASGAVYSHHLQDHAVTSLKLSPESVATDKINDLAITAPKLAEGSVTSSKLSARSVQPWHITDKAVLSNHLAVEAVEANHLAPESVTSNHLQSASVQTKHLAPDSVSGHALQSESVTSEKLAARAVQASNLAENSVGPRHLAAQSVQTKHLAAGVVEETILAHNAVKSEHLAAESIQSEHLQSEIIREEHIALQAISTDALQDASVTSDKLADEGVTSTKLSAHAVQSGHIMDEAVQSNHLAVAVVDSTHLASGAVTSVHLQASSVLTRHLAPDSVSGRALQAESVTSEKLAARSVQGMNLAEGSIGPSHLSVQSVHTRHLAAGAVQDRVLAEGAVKSVHIAPESIQPHHLHTEIIQGEHIASQAISTDALQDESVTSDKLADEGVTAAKLSAHSVQSWHITDEAVQGNHLAAESIQSNHLSPESVTSAHLQSSSVLTSHLAPDSVSGRALQAESVTSEKLAAHSVQGTNLAEDSVGPSHLSAQSVHTRHLATGAVQDTTLAKGAVKSVHITAGSIQPHHLHTGSIQSEHIASQAISTDALQDASVTSDKLVDEGVTAAKLSVNSVQPWHITDEAVQGNHLAAEAIQSSHLASESVTSRHLQTSSVLTSHLAPDSVSGRALQAESVTSEKLAARSVQGTNLAEGSIGPSHLSAQSVHSRHLVAGAVQDRALAEGAVKSVHIAPESIQSHHLHPGTIQGEHLASQSISTDVLQDESVTSDKLADEGVTAAKLSAHSVQPWHITDEAVQANHLAEEAVQSSHLAPESVTSAHLQSSVILASHLAPDSVSGLALQAESVTSEKLAARSVQGKNLAEDSVGPSHLSAQSVHTQHLAVGAVQDTALAEGAVKSVHIAPESIQSHHLHPGTIQSKHLASLSISTDALQDESVTSDKLANEGVTAAKLSAHSVQPWHIADEAVQANHLAEETIQSSHLSPESVTSVHLHSSAVLASHLAPDSVSSRALQAESVTSEKLAAHSVQGTNLAEDSVGPSHLSAQSVHTQHLAIGAVQDTALAEGAVKSVHIAPESIQSHHLHPGTIREEHITYRSISTDALQEESVTSDKLADEVVTAAKISPHSVQPWHITDEAVQANHLAEEVVQSSHLSPESVTSAHLQSSAVLASHLAPDSVSGRALQAESVTSEKLAAHSVQGANLAEGSVGPAHLSAHSVHTQHLAIGAVQDTALAEGAVKSVHIAPESIQPHHLHPGTIQGEHLAYQSISTNALQDESVTSDKLADEVVTAAKISPHSVQPWHITDEAVQAHHLAEETIQSSHLAPESVTSAHLQPSAVTIQHIAPGSVSVHALQAGSVNAEKLALRAVRASNLAEASVSSVHLTEHAVQAQHLSDGAIQESALAEGAVQSRHISPDSVQSEHLQAGAIQSQHIGWQAVSEEAIRDGAVTSGKLADGTVESRHVAEEAIEGHHIAEEVIDSHHLKPGSVTLNQLSTDIHLSGLLPEEGISGDKLQANSISRSHLQNQVVDSEVLSPEAVGPEHLQAAAVQSHHVAEQSIGGHHLVEGSVGSRELELNAVTPEHLSITPVRTCANQPALQQFGRAPFLLKGSEGETEVTIVFGEPFVNPDYTLVAMTNHPLFHATLKSQTTHGAVIVVTKWSETAHNYGIVSWIAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Q8</accession>
    <name>E3E5Q8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372514.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57935">
        <property type="protein sequence ID" value="ADO57935"/>
        <property type="gene ID" value="PPSC2_18580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3981"/>
    <dbReference type="eggNOG" id="ENOG5030676">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2303141_0_0_9"/>
    <dbReference type="OMA" id="DHYGEIS"/>
    <dbReference type="OrthoDB" id="2009085at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11386" checksum="224C5859B73623DF" modified="2011-01-11" version="1">MARTQTQKALSKAKRAGIYCAAQSRKTNDHYGEISQHTRLKPTKQEQLQKVKHKKRLVQGDASFFVLSEVEKLRGSECIGADSIFYNIGQKELDNNYHSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E664</accession>
    <name>E3E664_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Damage-inducible protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dinF</name>
        <name evidence="6" type="ORF">PPSC2_13040</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371353.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2783"/>
    <dbReference type="EnsemblBacteria" id="ADO56749">
        <property type="protein sequence ID" value="ADO56749"/>
        <property type="gene ID" value="PPSC2_13040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2777"/>
    <dbReference type="eggNOG" id="COG0534">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012893_16_0_9"/>
    <dbReference type="OMA" id="RIWGAPF"/>
    <dbReference type="OrthoDB" id="1415498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13136">
        <property type="entry name" value="MATE_DinF_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044644">
        <property type="entry name" value="DinF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42893">
        <property type="entry name" value="PTHR42893"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="133"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="159"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="186"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="311"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="352"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="387"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="412"/>
            <end position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="436" mass="47933" checksum="C5F340A258913176" modified="2011-01-11" version="1">MLPSHRAYLALAIPLIISTITTPLLGAVDTAVIGHLSQSAYLGGVAVGTLIFNTLYWLFGFLRVSTSAFTAQAAGAQNNDQGIAALMRPLAIALLISAVFIVLQKPILLASLQLIRPAQDVAEQAAIYFNIRIWGAPLTLVNYVLLGWLMGLSRVKATLFLQISMNVINMLLALVFTQIMHWNVTGVASATLIAEALACVLGLALVFRSPIWREWKRSGQRNWREWFGASELKSVMATNLDLMIRTACLLTMFNLFTARSASFGTDQLAANAILLQIHYIMAYFFDGFANASSIMTGQARGAGDRKMLQRVIHLSWFWTLVTGVVTGGLYLALKEPLISLFTGNATVISLTIPYNGWLVIFPLAAGLGLVFYGVFTGMTVTYPIRNSMLISLVCFLIALFWCVPHYGNHGLWLSFIIFALGRSLFLVVYLPRLKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E688</accession>
    <name>E3E688_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Peptidase M29</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ampS3</name>
        <name evidence="10" type="ORF">PPSC2_13160</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peptidase M29 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371377.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00835"/>
    <dbReference type="MEROPS" id="M29.002"/>
    <dbReference type="EnsemblBacteria" id="ADO56773">
        <property type="protein sequence ID" value="ADO56773"/>
        <property type="gene ID" value="PPSC2_13160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2801"/>
    <dbReference type="eggNOG" id="COG2309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054346_1_0_9"/>
    <dbReference type="OMA" id="CNANIPT"/>
    <dbReference type="OrthoDB" id="689314at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1830.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035097">
        <property type="entry name" value="M29_N-terminal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000787">
        <property type="entry name" value="Peptidase_M29"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02073">
        <property type="entry name" value="Peptidase_M29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00919">
        <property type="entry name" value="THERMOPTASE"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="45593" checksum="B2A60539519527AD" modified="2011-01-11" version="1">MSDFQQKLQKYAELAVRVGANVQPGQTLIVHAPILSAELVRLIVKSAYTVGAKLVKVKWSDETVTRLQYELAPDETFNIAPKWYAAEMTEEVENGAAVLHVIAENPDLLQGIPSSRITAAQRVRSHELRQYREYQMADKFSWSLIAYPSAEWAAKVFPDLPASEQMDKLWEAIFSTVRVDLDNPVEAWNEHLKTLSSKADILNSKRYKKLHYLAPGTDLTIELAKDHLWVAAESINQQGHSFVANMPTEEVFTAPLKTGVNGKVSSTKPLSYSGNIIDNFSLTFENGRIVDVQAETGLETLQHLVEMDEGSHYLGEVALVPHKSPISDKNILFYNTLFDENASNHLAIGNAYAFNLKGGKDMTQEQLAANGLNSSLTHVDFMIGSGEMDINGVTEDGTEEPIFRKGNWAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6B0</accession>
    <name>E3E6B0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_18775</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372556.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05990"/>
    <dbReference type="EnsemblBacteria" id="ADO57979">
        <property type="protein sequence ID" value="ADO57979"/>
        <property type="gene ID" value="PPSC2_18775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4023"/>
    <dbReference type="eggNOG" id="COG0515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000288_63_44_9"/>
    <dbReference type="OMA" id="HFEENGT"/>
    <dbReference type="OrthoDB" id="1377603at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="4">
        <location>
            <begin position="20"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="34664" checksum="120443C2C2581ECD" modified="2011-01-11" version="1">MIVDTSGNLLARNTKLRNTYQIRSALSRSELAIVYTARLLDNREKVIVKEFFPNALALRGTDRKTVTCSATMQYKYVEFMHYFLREGQMLKELSHPGIVGYIDHFEENGTAYLVMEYCAGKTLDRMMQEEAVPTSDPAFLYQTLLPLIDALEYIHNKGIIHRDIKPGNIMIGEHGNIKLIDFGSAVHFEGKEHPIFTTAGYSPLEFYSNRSRQGPVSDIYSLAATLYYCQKGSPPPDVPGRLFADRTERIRIENAGISLLPYVIRRGLEVQATKRCRSLRWFKAALRAEYWIKKGKRPTLTVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6V1</accession>
    <name>E3E6V1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cytochrome D ubiquinol oxidase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">cydA1</name>
        <name evidence="13" type="ORF">PPSC2_21360</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373071.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08585"/>
    <dbReference type="EnsemblBacteria" id="ADO58503">
        <property type="protein sequence ID" value="ADO58503"/>
        <property type="gene ID" value="PPSC2_21360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4540"/>
    <dbReference type="eggNOG" id="COG1271">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030555_3_2_9"/>
    <dbReference type="OMA" id="WAIIFNP"/>
    <dbReference type="OrthoDB" id="271551at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002585">
        <property type="entry name" value="Cyt-d_ubiquinol_oxidase_su_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30365">
        <property type="entry name" value="PTHR30365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01654">
        <property type="entry name" value="Cyt_bd_oxida_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006446">
        <property type="entry name" value="Cyt_quinol_oxidase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 12" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5 12" id="KW-0349">Heme</keyword>
    <keyword evidence="10 12" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="61"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="94"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="129"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="187"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="220"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="324"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="354"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="402"/>
            <end position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR006446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="448" mass="49611" checksum="F6EB9CAC4A0C0E50" modified="2011-01-11" version="1">MSSLDPVLLSRMLTGITLFVHIVFASIGVGVPLMIALAEWRGLRTGDPHYTLLARRWARGFVITVAVGVVTGTSIGLQLSLLWPTFMRVAGQAIALPLFLETFAFFIEAIFLGIYLYTWDRFKSKYFHLMLLIPVAIASSASAVFITTVNSFMNQPQGFTLKNGVMTNIHPIEAMLNPATPTKVSHVLASSYTLSAGVLMGLAAYSMLRGRNHPYFKKALKLTATCTIVFAISTVMIGDASGKFLAKYQPEKLAAAEWHFDTMTHAPFVYGGFMDENGEIKYALKVPYALSVLAGNLPSTEVKGLNDYPVEERPPLSIHYMFDLKITTGVLILVIPLLYLIRKRLPGRKPYPRWLLLALILVGPMAMVAIELGWMFAEVGRQPWILRGYMKVSEAATTSTSVGWMLVLFVILYLVLCFSAIKVLSKLFRNKDAVEEIRQLGLEGAEGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6X0</accession>
    <name>E3E6X0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ROK family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">xylR5</name>
        <name evidence="4" type="ORF">PPSC2_21445</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Transcriptional repressor of xylose-utilizing enzymes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ROK (NagC/XylR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373090.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08640"/>
    <dbReference type="EnsemblBacteria" id="ADO58522">
        <property type="protein sequence ID" value="ADO58522"/>
        <property type="gene ID" value="PPSC2_21445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4559"/>
    <dbReference type="eggNOG" id="COG1940">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036604_13_2_9"/>
    <dbReference type="OMA" id="VDFGHTH"/>
    <dbReference type="OrthoDB" id="1130699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0859">Xylose metabolism</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="390" mass="41901" checksum="6F8F7A41202A46A7" modified="2011-01-11" version="1">MNVTGDQALVKKLNKSIVLERIRLHAPLSRAQLSSQTGLNKATVSNLVAELITDGLVYETGLGESSGGRKPLMLLFNSRAGFVLGIEVSVQYIKGALTDLAGTIETELTLSLTQHDPDFVIEQIRKLVQKLMQVTPPSPHGIVGIGLGVPGMVDETGNVLFAPNLGWEEVPLRQQLETELGLPIVVDNEANVGAQGELYYGMDADHRQLVRDLVYISAGSGIGAGIIIDGKPYQGAWGYAGESGHMSIDWNGRLCSCGSRGCWELYASEKAYVASTLKLPAHNTAGLLPFAQQGDVSTLSVLGEIGRYLGVGITNIVNSLNPGMLIIGGPLAEARPWLEQSMREVIDERALPYHRRQLQIRFSTLGSRSTMLGAAYAATAPFLGRVRVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7J9</accession>
    <name>E3E7J9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribose ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rbsC1</name>
        <name evidence="7" type="ORF">PPSC2_13300</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371407.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00990"/>
    <dbReference type="EnsemblBacteria" id="ADO56804">
        <property type="protein sequence ID" value="ADO56804"/>
        <property type="gene ID" value="PPSC2_13300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2834"/>
    <dbReference type="eggNOG" id="COG1172">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028880_2_2_9"/>
    <dbReference type="OMA" id="FDVWNKR"/>
    <dbReference type="OrthoDB" id="1254678at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="51"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="127"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="167"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="275"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="33616" checksum="98C43EF9C54E46E3" modified="2011-01-11" version="1">MTTKNEAKGSKGIQISQITQKLGPLLGLIILVIIVSALNPSFLEPLNILNLLRQVSINALIAFGMTFVILTGGIDLSVGSILALSSAFVANMMLVGFDPILAIIIGCALGGVMGMVNGLMITKGKMAPFIATLATMTIFRGLTLVYTNGNPITGLGDSLVFQLFGRGYQFGIPVPAITMLITFAVLWIILHKTPFGRKTYAIGGNEKASIVSGIKVPRVKIWIYSLAGMLSALAGAILTSRLNSAQPTAGTSYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVNSFYQMVVKGIVIAIAVLIDRKKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7U9</accession>
    <name>E3E7U9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">bcrA7</name>
        <name evidence="6" type="ORF">PPSC2_14140</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371582.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01795"/>
    <dbReference type="EnsemblBacteria" id="ADO56982">
        <property type="protein sequence ID" value="ADO56982"/>
        <property type="gene ID" value="PPSC2_14140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3018"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="LVQAFMH"/>
    <dbReference type="OrthoDB" id="1833499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="46"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="78"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="358" mass="39434" checksum="A74E7A20AAC16FF2" modified="2011-01-11" version="1">MSIQSADKTEAGVTQDSTSTNAVSSLHSSNQVGSADRDSSNNEIVLSVQHVKKRIKRKMIIHDVTFDVRAGEIFGFLGPNGAGKTTTIRMLVDLIKPTEGTITVCGHNVNRDPEQALRHIGSIVENPEVYSYLTGWENLEHFARMQPGVDEQRIREVVELVRLDRRIHDKVSTYSLGMRQRLGIAQALLGRPKLLILDEPTNGLDPKGIKEMRAFIRLLAAEGMAVFVSSHLLSEIQLLCDRVAIISRGKVLAVGGVQELVETHSHMAVWQLEPRDQGLALLQNSPYVHIITNVDELIDDSIVAGSGVDAIFTEMDEEHIAKLVAHMTASGISVKGVTKINPTLEQLFLKMTEGEILE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E801</accession>
    <name>E3E801_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Abortive infection protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypbD</name>
        <name evidence="2" type="ORF">PPSC2_14765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371710.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02400"/>
    <dbReference type="EnsemblBacteria" id="ADO57114">
        <property type="protein sequence ID" value="ADO57114"/>
        <property type="gene ID" value="PPSC2_14765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3151"/>
    <dbReference type="eggNOG" id="COG1266">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108801_0_0_9"/>
    <dbReference type="OMA" id="PYVIWAT"/>
    <dbReference type="OrthoDB" id="1623593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071586">
        <property type="term" value="P:CAAX-box protein processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003675">
        <property type="entry name" value="Rce1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02517">
        <property type="entry name" value="Rce1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="22724" checksum="B13DF0EA0B1FA252" modified="2011-01-11" version="1">MKKLKVKWKRAQIHQLNDRLLLYNLYLTQGLTLLIGAIWIIFQKRNVFELFALPNTVHVLWWGLGLAAAMLLVDLLLSRIMPEDAMDDGGINQMLFQNRPVWHIICIAAIVSICEELLFRGAIQYSFGPYWTSILFAVIHIRYLRHWIPTGWVFLSSYGLGYIYVQTGSLWAPIICHFVIDLISGLALRFRRYEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E833</accession>
    <name>E3E833_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Purine nucleoside phosphorylase</fullName>
            <ecNumber evidence="3">2.4.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Inosine-guanosine phosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">deoD1</name>
        <name evidence="6" type="ORF">PPSC2_14915</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Purine metabolism; purine nucleoside salvage.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the PNP/MTAP phosphorylase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.1" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371739.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02550"/>
    <dbReference type="EnsemblBacteria" id="ADO57146">
        <property type="protein sequence ID" value="ADO57146"/>
        <property type="gene ID" value="PPSC2_14915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3182"/>
    <dbReference type="eggNOG" id="COG0005">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054456_1_2_9"/>
    <dbReference type="OMA" id="EGVYAQF"/>
    <dbReference type="OrthoDB" id="1364220at2"/>
    <dbReference type="UniPathway" id="UPA00606"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004731">
        <property type="term" value="F:purine-nucleoside phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009116">
        <property type="term" value="P:nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09009">
        <property type="entry name" value="PNP-EcPNPII_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011270">
        <property type="entry name" value="Pur_Nuc_Pase_Ino/Guo-sp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011268">
        <property type="entry name" value="Purine_phosphorylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11904">
        <property type="entry name" value="PTHR11904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000477">
        <property type="entry name" value="PurNPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01700">
        <property type="entry name" value="PNPH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01697">
        <property type="entry name" value="PNPH-PUNA-XAPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PNP_UDP_1" evidence="5">
        <location>
            <begin position="26"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate binding" evidence="4">
        <location>
            <begin position="83"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>a purine D-ribonucleoside</name>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>a purine D-ribonucleoside</name>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000477-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="29279" checksum="D87626743400EE7C" modified="2011-01-11" version="1">MSTANQATIQEAADYIRAKSGITPEIGLILGSGLGILADLIQDGVSIPYQDIPHFPVSTVEGHEGELLLGTIEGRAVVMMKGRFHMYEGYGPQLTAFPVRVMKQLGIQSLLVTNAAGGVNTSYKAGDLMVISDHLNLTGQNPLIGPNDAALGVRFPDMSEAYSRRLREIAKQTATQQGFSLQEGIYAGLLGPNYETPAEIVMLRTLGADAVGMSTVSEVIVARHAGIEVLGFSCITNMAAGILDQPLSHGEVMETAEKVREQFLKLVLAIIPQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8A0</accession>
    <name>E3E8A0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetoin utilization protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">acuA</name>
        <name evidence="2" type="ORF">PPSC2_15610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371879.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03260"/>
    <dbReference type="EnsemblBacteria" id="ADO57292">
        <property type="protein sequence ID" value="ADO57292"/>
        <property type="gene ID" value="PPSC2_15610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3333"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113703_0_0_9"/>
    <dbReference type="OMA" id="KIMEKMM"/>
    <dbReference type="OrthoDB" id="1812368at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019152">
        <property type="term" value="F:acetoin dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045150">
        <property type="term" value="P:acetoin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024699">
        <property type="entry name" value="AcuA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021278">
        <property type="entry name" value="AcuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="19"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="24828" checksum="6C251C35EE3F5BBB" modified="2011-01-11" version="1">MQHLKLYHLDTLDHNGQTIYVEGPISADRLRSFQMHTQLDAFRKPKEQFEALVEISELPEGRIIIAHDGETLLGYVTFHYPDEMERWSEAGMKDLLELGAVEVADDYRGLGLGSRMIRIAFEDGQLESYIIFTTEYYWHWDLKGSGLSVWEYRRMMERLMKTVNMVWYATDDPEICSHPANCLMVRMGDDVPLESREQFDRIRFVRRFMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G5</accession>
    <name>E3E8G5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 7">Transcriptional regulator MraZ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">mraZ</name>
        <name evidence="10" type="ORF">PPSC2_16655</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="7">Forms oligomers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
            <location evidence="7">Nucleoid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MraZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013311099.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03990"/>
    <dbReference type="EnsemblBacteria" id="ADO57514">
        <property type="protein sequence ID" value="ADO57514"/>
        <property type="gene ID" value="PPSC2_16655"/>
    </dbReference>
    <dbReference type="GeneID" id="66576715"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3554"/>
    <dbReference type="eggNOG" id="COG2001">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107907_0_5_9"/>
    <dbReference type="OMA" id="RGQERCL"/>
    <dbReference type="OrthoDB" id="1684767at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="P:cell division"/>
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    </dbReference>
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        <property type="entry name" value="MraZ_C"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="MraZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
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        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34701">
        <property type="entry name" value="PTHR34701"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02381">
        <property type="entry name" value="MraZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="TIGR00242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="10" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 7" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="9">
        <location>
            <begin position="5"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="SpoVT-AbrB" evidence="9">
        <location>
            <begin position="76"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16763" checksum="C006B595FB33C12E" modified="2011-01-11" version="1">MFMGEFQHSIDEKGRLTVPAKFRELLGASFVVTRGLDQCLFVYPMDEWAVMEKKLKALPLMKADARAFTRFFFSGATECELDKQGRVNLPGNLCEYAKLTKECVVLGVSTRVEIWSKHTWEQYFNQSEEAFNDIAEKLVDFNFEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L0</accession>
    <name>E3E8L0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">7TM receptor with intracellular metal dependent phosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yqfF</name>
        <name evidence="3" type="ORF">PPSC2_16855</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372142.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04190"/>
    <dbReference type="EnsemblBacteria" id="ADO57559">
        <property type="protein sequence ID" value="ADO57559"/>
        <property type="gene ID" value="PPSC2_16855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3598"/>
    <dbReference type="eggNOG" id="COG1480">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015767_1_2_9"/>
    <dbReference type="OMA" id="DFIRTHH"/>
    <dbReference type="OrthoDB" id="1124669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006675">
        <property type="entry name" value="HDIG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011624">
        <property type="entry name" value="Metal-dep_PHydrolase_7TM_extra"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011621">
        <property type="entry name" value="Metal-dep_PHydrolase_7TM_intra"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07698">
        <property type="entry name" value="7TM-7TMR_HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07697">
        <property type="entry name" value="7TMR-HDED"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00277">
        <property type="entry name" value="HDIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0675">Receptor</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="300"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="338"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="387"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="411"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="442"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="472"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="domain" description="HDc" evidence="2">
        <location>
            <begin position="524"/>
            <end position="685"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="748" mass="84639" checksum="9EF1723AF439FAF8" modified="2011-01-11" version="1">MTSKELSKGKTFQHRMNGWKYSVATRYLLFLFLVVLFYVGFASKLLPERYDIRVNQPSEKEIVAPMQLPNSKATLKAQEESAERVHPMYTIVPIRNDNLITGILDRIERLNQDDQVSRADKISIYKDEIPQRAREFVQNFVNNSRNADAYPDKLLDEVLEKTKEQTYRIPEETYIKIPRLTSEDIAEMRPVAREIVTGLMNDQITDAQTARAKVAERVSTSSLTKRTSREVVQELARLVITANKFYDDTATKDAKVQAREDTPTVYIKQGEVLVKKGEIITQEIYTLLDENELLKDKINYWPQFGLLMLSMMLALGLFMYIRQFQSRTRNFKYNNAQLLMLVLIFVITVGAMLLISILQTSERSYLGYLAPIALGAMLVTLLLDMSLAFVCAVIFSILASVILNVRQGQIFDFNFGFFALVVCLASIFSTHRASQRSTLFKGAIMVCLFGALAVFSLALIDQGNWTQTTTLYGVAFAFAGGLVTAILVIGLMPFFESTFGILSALKLVELSNPNHPLLRKLLTETPGTYHHSVMVGNLSEAAAEAIGANGLLCRVGSYYHDIGKTKRPSYFIENQNGMENPHDTIEPKLSKSIIIAHARDGVEMQLDYKLPKPIRDIAEQHHGTTFLHYFYHKALREAEERGVEPDFTEDDFRYPGPKAQSKEAAVVGIADSVEAAVRSLRKPTVEQVESMIEKIIKSRLDDHQFNDCELTMRELDIVAQTLKETVMGIFHSRIEYPEERPKPESGKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8M9</accession>
    <name>E3E8M9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE6</name>
        <name evidence="2" type="ORF">PPSC2_17690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372319.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3784"/>
    <dbReference type="EnsemblBacteria" id="ADO57738">
        <property type="protein sequence ID" value="ADO57738"/>
        <property type="gene ID" value="PPSC2_17690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3782"/>
    <dbReference type="eggNOG" id="COG0500">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1364194_0_0_9"/>
    <dbReference type="OMA" id="CNESGME"/>
    <dbReference type="OrthoDB" id="1431378at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="26"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="201" mass="23524" checksum="0311E4DDE6F8F76A" modified="2011-01-11" version="1">MELFRQVPLYRFLALCNESGMERTVLDCGAGGDSPPLSLFVHYGYKTIGIEMNVEQFQKANRFAEMRGQNLNIQHGDMRSLSFSDESISFVYSYNSVFHMRKEDVKQSINEMKRVLKPNGVLFVNFLTVKDFRVGEGVDLGDNQYEQIEDNEPVIHSYYDYNEADAMFDDMKLIYKEDRVLERIYEGKKIRQGFIDYILKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8S0</accession>
    <name>E3E8S0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">tlpA3</name>
        <name evidence="11" type="ORF">PPSC2_17885</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57779.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05220"/>
    <dbReference type="EnsemblBacteria" id="ADO57779">
        <property type="protein sequence ID" value="ADO57779"/>
        <property type="gene ID" value="PPSC2_17885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3821"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033480">
        <property type="entry name" value="sCache_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17200">
        <property type="entry name" value="sCache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM01049">
        <property type="entry name" value="Cache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="196"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="220"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="9">
        <location>
            <begin position="292"/>
            <end position="528"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57779.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="578" mass="62902" checksum="9CF08A1FC21AB9D2" modified="2015-05-27" version="2">MKVRSLRTKLTIMCLIILIVPTFVIGISSYVVSKNEMNESGKVALKNSVQMVIGMISFLNGQVEAGNLTLEEAQEKLRIELLGVKDANNKRPVKIKYTVGKTGYPWAVNQDAVSVMNPSNEGQDLINAVSKDGVHVGKEFVEAGTNGGGFVTYKWALPGTDQVETKISYVERDPYWGWIIGSGAYFNEFNSGATKVLYIVLIITTIAVILGAIIVSFVSGRFTKPIIMIAKRLNAVADGDLTVEEVKMNSKDEVGELAQDFNHMIKNIRYLIGEVNLSTKQVAASSKELTLGAEHTGQATEHITIAIQESAAGAKEQQLMLQKTTSSLEEISIGMQRITDSSLTIAESSADAMEMASLGGTAVQHTVKQMDLINHSVNETDAVMRMLDERTQQIDTMLHAITDIAQQTNLLALNASIEAARAGEEGRGFSVVASEVRKLAEQSNQSSGQISELIQNMRKDMEHSLKTMERVKQDVDSGIKIANETEQQFKKIVASTNHIAQQTEELASITEQITASVQEISASGENVSSLALQAADNSQNIAASAEEQLASMQQITSLATTLSDMSQKLQDLTVKFKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8W2</accession>
    <name>E3E8W2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uracil transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">uraA</name>
        <name evidence="8" type="ORF">PPSC2_19145</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372635.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06345"/>
    <dbReference type="EnsemblBacteria" id="ADO58060">
        <property type="protein sequence ID" value="ADO58060"/>
        <property type="gene ID" value="PPSC2_19145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4102"/>
    <dbReference type="eggNOG" id="COG2233">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017959_1_2_9"/>
    <dbReference type="OMA" id="INHGIGM"/>
    <dbReference type="OrthoDB" id="1115239at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015205">
        <property type="term" value="F:nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006042">
        <property type="entry name" value="Xan_ur_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00801">
        <property type="entry name" value="ncs2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01116">
        <property type="entry name" value="XANTH_URACIL_PERMASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="66"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="90"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="127"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="190"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="229"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="310"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="340"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="373"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="399"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="436" mass="45610" checksum="4C3A8318AF5256C0" modified="2011-01-11" version="1">MQREIQVNEKLPAGPGILLSVQHLFAMFGSTVLVPNIFGVDPGMILLMNGIGTLLYIWICRGKIPAYLGSSFAFIAPVSLVLKSNPGSSGYAMALGAFIATGIIFCLVALVIKYAGTRWLDIVFPPAVMGSIVALIGLELVPVAAGMAGIINADPTKAWTPDPKTITLSLVTLGVTVLGAVLFRGFAKIIHILIGIVVGYVLAYFMGMVNTQAIADAPLFAHPAITTPTFNASAMLTILPVALVVIVEHIGHLLVTSNIVGRELSKDPGLHRSLLGNGISTVISGFVGSTPNTTYGENIGVMALTKVYSVWVIGGAAVIAILLSFSGTFSAIVSNIPSPVMGGVSLLLFGVIAASGLRIFVEQKVDFAKPTNMLLATIVLVVGISGTTLTWGAVTLKGMALATIIGIILSLFFKLVDVLGWSNDKTQEPLTEKTPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E962</accession>
    <name>E3E962_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373802.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5332"/>
    <dbReference type="EnsemblBacteria" id="ADO59269">
        <property type="protein sequence ID" value="ADO59269"/>
        <property type="gene ID" value="PPSC2_24950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5287"/>
    <dbReference type="eggNOG" id="ENOG50305W6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1968405_0_0_9"/>
    <dbReference type="OMA" id="WAVISLK"/>
    <dbReference type="OrthoDB" id="1874409at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="14601" checksum="8EF77E5B351AB515" modified="2011-01-11" version="1">MAIIVGIVFFLIGFPEFKKSPKLTKKAKKDITYIMSTLLTLVIFVVIVSWNIHTSGDLFLEGPLTPQMKLHWGQKVLILGLVEGLWAVISLKWLLPIFFDPLDLSKKQILVLVSGIALSMISGIYAMLEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9F5</accession>
    <name>E3E9F5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372168.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3631"/>
    <dbReference type="EnsemblBacteria" id="ADO57586">
        <property type="protein sequence ID" value="ADO57586"/>
        <property type="gene ID" value="PPSC2_16975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3625"/>
    <dbReference type="HOGENOM" id="CLU_205850_0_0_9"/>
    <dbReference type="OMA" id="RFDKVLT"/>
    <dbReference type="OrthoDB" id="2050378at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025435">
        <property type="entry name" value="YfhD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14151">
        <property type="entry name" value="YfhD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="7184" checksum="A2B2F22DBF00E5DC" modified="2011-01-11" version="1">MSKNKRFDKVLTKTEKIKRMQSAKNEDVEFSAELADAEDLEAIRRSEVADRRQQRITNDNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9H8</accession>
    <name>E3E9H8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Competence protein ComEC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">comEC</name>
        <name evidence="8" type="ORF">PPSC2_17080</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57609.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04415"/>
    <dbReference type="EnsemblBacteria" id="ADO57609">
        <property type="protein sequence ID" value="ADO57609"/>
        <property type="gene ID" value="PPSC2_17080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3648"/>
    <dbReference type="eggNOG" id="COG0658">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2333">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010363_2_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07731">
        <property type="entry name" value="ComA-like_MBL-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035681">
        <property type="entry name" value="ComA-like_MBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004477">
        <property type="entry name" value="ComEC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025405">
        <property type="entry name" value="DUF4131"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03772">
        <property type="entry name" value="Competence"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13567">
        <property type="entry name" value="DUF4131"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00360">
        <property type="entry name" value="ComEC_N-term"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="27"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="247"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="273"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="369"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="405"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="468"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="548"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="domain" description="Lactamase_B" evidence="7">
        <location>
            <begin position="583"/>
            <end position="794"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57609.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="874" mass="97230" checksum="D7B721461797B169" modified="2015-05-27" version="2">MLLLLWAGVTLISPLIALLMKIPIRHMVLLWIVLSSGGFHWFWHDMHNVSSIPGALHVSSSVIEDMPVQAAGFIASEVEIDGDRAQFEMRVTSIHHFASQSNKVEHRGSISEQVIVHIKLAAKQEQQLAAAWQRGDAILLRGNLKAPAKAGNFGSFDYSKYLHTQEIHWLFKGAGAASLQRQEASQWNRYILFRWNDQLREQLGQKMESAFTSLLQAGYMKGLVLGVTDELDPATYNEFTQLGLTHILAISGMHVAVYAATLLYLLKLLRVSRETSLTIVMVLIPAYVLLTGASPSVVRAGIMAMIGLFAARRGLLKDGLNILSISALLMLLWNPYYLLSVSFQLSFLVTGGLLIYMPLMKPFFAKWPLLIGGEVAITVTAQLVSFPMTVFYFNQFSLLSFAANFVLVPLITYIVLPLGTVAMGMAFLWGDGARILAWPAEQLNDLTFWLVKWLNVDDAYVSIWPSSSILWVLAYYAALYSVLYWLKTWLTSRRKTGDISVVNSTTITSPMYTGLEAAAEWAAILQTAHEPEGAGKFARRQWNGYRHVALALSGIAWLGILCIGYQSPSERNTGVVQYLDVGQGDSILITTPGGKHILVDGGGTMDFATGKNAWRKRTDPYEVGADTIVPLLKQRGVHRLDAVILTHGDHDHAGGLQAVFDQIPVSTLFFNGTLTDKAPFRKLLNTALDKQIKLYGAHHSMEWGPDRDTKIRFLYPFKLEENESEQLPVMKEQNHYSVAMILEMEGASFLFTGDMDDAAESLLLSELTRSPSRVKAQEGIGDARKAVDVMKVAHHGSKYSTSEEWLSYWQPKVSVISVGASNTYGHPNKAVLERLAEVGSAIYRTDTMGEVQIRAQQGKLSVRYQRKREQIDTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9W2</accession>
    <name>E3E9W2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable septum site-determining protein MinC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">minC</name>
        <name evidence="6" type="ORF">PPSC2_19385</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Interacts with MinD and FtsZ.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MinC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372669.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06585"/>
    <dbReference type="EnsemblBacteria" id="ADO58095">
        <property type="protein sequence ID" value="ADO58095"/>
        <property type="gene ID" value="PPSC2_19385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4136"/>
    <dbReference type="eggNOG" id="COG0850">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048711_1_1_9"/>
    <dbReference type="OMA" id="EMECAYI"/>
    <dbReference type="OrthoDB" id="1665744at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000902">
        <property type="term" value="P:cell morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901891">
        <property type="term" value="P:regulation of cell septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00267">
        <property type="entry name" value="MinC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016098">
        <property type="entry name" value="CAP/MinC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013033">
        <property type="entry name" value="MinC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036145">
        <property type="entry name" value="MinC_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005526">
        <property type="entry name" value="Septum_form_inhib_MinC_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34108">
        <property type="entry name" value="PTHR34108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03775">
        <property type="entry name" value="MinC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63848">
        <property type="entry name" value="SSF63848"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 4" id="KW-0132">Cell division</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0717">Septation</keyword>
    <feature type="domain" description="MinC_C" evidence="5">
        <location>
            <begin position="103"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="24211" checksum="7E0479E553157C20" modified="2011-01-11" version="1">MAVKSNHVTIKGIKDGLVFLLDDQCEFEDLLGELRFKLEHSHQNILTGPIIHVDIKLGSREVTEEQKESILEILKQKGNLLIRSVESPGLPVVVQGKPPIHTVTGIIRSGQVLHHDGNLLFLGDVNPGGIITCTGDIYVLGALRGMAHAGMEGNSEAIIAASYFAPTQLRISEMISRPPDEWETRESGMEFAYLKDGAMQIDKMSNIVRLGRDFNVFKGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="80" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Y6</accession>
    <name>E3E9Y6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Lon protease</fullName>
            <ecNumber evidence="5 6">3.4.21.53</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">ATP-dependent protease La</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 14" type="primary">lon</name>
        <name evidence="14" type="ORF">PPSC2_19500</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6 9">
            <text>Hydrolysis of proteins in presence of ATP.</text>
            <dbReference type="EC" id="3.4.21.53"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5 6">Homohexamer. Organized in a ring with a central cavity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="induction">
        <text evidence="5">By heat shock.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6 9 10">Belongs to the peptidase S16 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.53" evidence="5 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372692.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06700"/>
    <dbReference type="MEROPS" id="S16.001"/>
    <dbReference type="EnsemblBacteria" id="ADO58119">
        <property type="protein sequence ID" value="ADO58119"/>
        <property type="gene ID" value="PPSC2_19500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4159"/>
    <dbReference type="eggNOG" id="COG0466">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004109_4_3_9"/>
    <dbReference type="OMA" id="GAWQVVD"/>
    <dbReference type="OrthoDB" id="128102at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034605">
        <property type="term" value="P:cellular response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006515">
        <property type="term" value="P:protein quality control for misfolded or incompletely synthesized proteins"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01973">
        <property type="entry name" value="lon_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027543">
        <property type="entry name" value="Lon_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004815">
        <property type="entry name" value="Lon_bac/euk-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008269">
        <property type="entry name" value="Lon_proteolytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027065">
        <property type="entry name" value="Lon_Prtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003111">
        <property type="entry name" value="Lon_prtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008268">
        <property type="entry name" value="Peptidase_S16_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10046">
        <property type="entry name" value="PTHR10046"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05362">
        <property type="entry name" value="Lon_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02190">
        <property type="entry name" value="LON_substr_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001174">
        <property type="entry name" value="Lon_proteas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00464">
        <property type="entry name" value="LON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00763">
        <property type="entry name" value="lon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51787">
        <property type="entry name" value="LON_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51786">
        <property type="entry name" value="LON_PROTEOLYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01046">
        <property type="entry name" value="LON_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="14" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 5 6" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0720">Serine protease</keyword>
    <keyword evidence="4 5" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="Lon N-terminal" evidence="13">
        <location>
            <begin position="11"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="Lon proteolytic" evidence="12">
        <location>
            <begin position="592"/>
            <end position="773"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="190"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="active site" evidence="5 7 9">
        <location>
            <position position="679"/>
        </location>
    </feature>
    <feature type="active site" evidence="5 7 9">
        <location>
            <position position="722"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <begin position="356"/>
            <end position="363"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR001174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001174-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001174-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO58119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="778" mass="87371" checksum="678516B220166DC8" modified="2011-01-11" version="1">MGPTKTKGRRFPLLPLRGLLVYPSMVLHLDVGREKSVKALEKAMVEDNLILLCSQSEVNIEEPTQEDIFRVGTVAKVRQMLKLPNGTIRVLVEGLERAEIIQYTDNEEYYEVMAKELHEAENVQPETDALMRTVLTQFEHYINLSKKVTPETLAAVSDIEEPGRLADVITSHLTLKIKEKQDILETIDVTQRLEKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKELGEKEGRAGEVEELRNQLSERELPVPVKEKVEKEIDRLEKMPASSAEGSVIRNYVDWLLSLPWNKFTDDDLDIVKAEEILDNDHYGLDKPKERVLEYLAVRKLVKTIKGPILCLVGPPGVGKTSLARSIAKSMGREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGTSNPVFLLDEIDKMASDFRGDPSAALLEVLDPEQNNTFSDHFVELPFDLSNVMFVTTANAAHNIPRPLMDRMETLYIPGYTELEKLEIANRYLLPKQKREHGLGEEQLVIGEDTLLRVIREYTRESGVRNLEQQMASLCRKAAKSVVSGGEGPIEITPDNLKDYLGIAKFRYGVAELEDQIGTVTGLAWTEVGGETLMIEVTVVPGSGKLILTGKLGDVMKESAQAAFSYTRSKAVDLGIELDFYEKNDIHIHIPEGAIPKDGPSAGITIATALISALTNRHVSKDVAMTGEITLRGRVLPIGGLKEKSLAAHRAGYKKILLPKDNERDLKDIPDSIRQDVEFVPVAHMDQVLKHALVEQARVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA36</accession>
    <name>E3EA36_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372899.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4378"/>
    <dbReference type="EnsemblBacteria" id="ADO58328">
        <property type="protein sequence ID" value="ADO58328"/>
        <property type="gene ID" value="PPSC2_20440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4360"/>
    <dbReference type="eggNOG" id="ENOG50305X7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2357101_0_0_9"/>
    <dbReference type="OMA" id="ENEYWVI"/>
    <dbReference type="OrthoDB" id="1761625at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="11075" checksum="8ABE7481C1572685" modified="2011-01-11" version="1">MSVIVSQQISATGVKEYTKVTKTFDSPFTPLVGQKIRDTAFGDMQYYDVEDVFIDLAENEYWVILPAILLHTDDIEDIRDAVREYRSHGWECTKPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA43</accession>
    <name>E3EA43_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YutM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yutM</name>
        <name evidence="2" type="ORF">PPSC2_20475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372906.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07730"/>
    <dbReference type="EnsemblBacteria" id="ADO58335">
        <property type="protein sequence ID" value="ADO58335"/>
        <property type="gene ID" value="PPSC2_20475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4367"/>
    <dbReference type="eggNOG" id="COG0316">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069054_5_2_9"/>
    <dbReference type="OMA" id="YQLYFDE"/>
    <dbReference type="OrthoDB" id="1891602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000361">
        <property type="entry name" value="FeS_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016092">
        <property type="entry name" value="FeS_cluster_insertion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017870">
        <property type="entry name" value="FeS_cluster_insertion_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01521">
        <property type="entry name" value="Fe-S_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="SSF89360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00049">
        <property type="entry name" value="TIGR00049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01152">
        <property type="entry name" value="HESB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-S_biosyn" evidence="1">
        <location>
            <begin position="2"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="119" mass="13018" checksum="31BCE65C064AA886" modified="2011-01-11" version="1">MINITDSAAERLKEMLEQQETPNMFLRLGVTPGGCTGFSYAMGFDDNETDQDIYMNVQDMKVVVEKDSIRYLDGLEIDFEESGMSGGFTIHNPNAVATCGCGSSFRTATDAGKPNEEPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA51</accession>
    <name>E3EA51_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Methionine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">abc</name>
        <name evidence="8" type="ORF">PPSC2_20515</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372913.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07770"/>
    <dbReference type="EnsemblBacteria" id="ADO58343">
        <property type="protein sequence ID" value="ADO58343"/>
        <property type="gene ID" value="PPSC2_20515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4375"/>
    <dbReference type="eggNOG" id="COG1135">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_3_9"/>
    <dbReference type="OMA" id="VIRKICH"/>
    <dbReference type="OrthoDB" id="1058434at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033232">
        <property type="term" value="F:ABC-type D-methionine transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03258">
        <property type="entry name" value="ABC_MetN_methionine_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026253">
        <property type="entry name" value="ABC_MetN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041701">
        <property type="entry name" value="MetN_ABC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018449">
        <property type="entry name" value="NIL_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43166:SF5">
        <property type="entry name" value="PTHR43166:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09383">
        <property type="entry name" value="NIL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00930">
        <property type="entry name" value="NIL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="4 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="2"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="37775" checksum="0F8CFE7BBBA1F65E" modified="2011-01-11" version="1">MIELKQLTKHYGKGNRRVNALSGLNLSIKRGEIFGVIGHSGAGKSTLIRCINLLERPTSGEVWVDGVNLVTVSQSQLQKQRRKIGMIFQHFNLLSSATVYDNIAFPLRLVNTPKQEMDKKVRELLELVGLKEHSGKYPSQLSGGQKQRVGIARALASDPHVLLCDEATSALDPQTTGSILKLLLDINQRFNLTIVLITHEMHVIQSICDRVGVIHQGDIVEQGPVAEVFLKPQHQVTKDFIQREAEHPEELQAAIAAAGSGESAQVVRISFLGSKTYDAILSRTARSTGVDFAILQGTISTIKNVPYGQLIVRFEGNHSDIEHTLREVSGQGLDVEVIDNERT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAJ2</accession>
    <name>E3EAJ2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">CDP-diacylglycerol--serine O-phosphatidyltransferase</fullName>
            <ecNumber evidence="4">2.7.8.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Phosphatidylserine synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pssA3</name>
        <name evidence="10" type="ORF">PPSC2_22565</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a CDP-1,2-diacyl-sn-glycerol + L-serine = a 1,2-diacyl-sn-glycero-3-phospho-L-serine + CMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16913"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57262"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="2.7.8.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.8" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373289.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10030"/>
    <dbReference type="EnsemblBacteria" id="ADO58750">
        <property type="protein sequence ID" value="ADO58750"/>
        <property type="gene ID" value="PPSC2_22565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4784"/>
    <dbReference type="eggNOG" id="COG1183">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049944_2_0_9"/>
    <dbReference type="OMA" id="IFFDFFD"/>
    <dbReference type="OrthoDB" id="1232102at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003882">
        <property type="term" value="F:CDP-diacylglycerol-serine O-phosphatidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004533">
        <property type="entry name" value="CDP-diaglyc--ser_O-PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000462">
        <property type="entry name" value="CDP-OH_P_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01066">
        <property type="entry name" value="CDP-OH_P_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00473">
        <property type="entry name" value="pssA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00379">
        <property type="entry name" value="CDP_ALCOHOL_P_TRANSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="30"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="92"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="122"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="178"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="203"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="227"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="229"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="27497" checksum="624649C62F7190ED" modified="2011-01-11" version="1">MITKSIPNMCTLGNLFLGMIAILLAVDGKYSLAAIMVIVAMLLDGLDGRMARALNAQSEFGKELDSLSDMISFGVAPAVIMYMVAFHDANSALAWTVTAIFPMCGALRLARFNVRPGVPGYFTGLPIPAAGGVLATLSLFHNEISLLYMSIAMLLVSYLMVSSMRYPNFKKVGLPKKAIWIAPWVVIAAVFLAVKFPDQLSKLIFVPLVLYALYGMKLNIRKLSRRRGRERDRSNQEEQDDQYRHSQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAN6</accession>
    <name>E3EAN6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_22795</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373333.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4853"/>
    <dbReference type="EnsemblBacteria" id="ADO58794">
        <property type="protein sequence ID" value="ADO58794"/>
        <property type="gene ID" value="PPSC2_22795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4827"/>
    <dbReference type="eggNOG" id="ENOG50334DM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056165_0_0_9"/>
    <dbReference type="OMA" id="MEANDSW"/>
    <dbReference type="OrthoDB" id="1612763at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025436">
        <property type="entry name" value="DUF4179"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040680">
        <property type="entry name" value="DUF5643"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13786">
        <property type="entry name" value="DUF4179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18705">
        <property type="entry name" value="DUF5643"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4179" evidence="2">
        <location>
            <begin position="56"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="DUF5643" evidence="3">
        <location>
            <begin position="248"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="380" mass="42899" checksum="6563333411035227" modified="2011-01-11" version="1">MSTHLNPEDKEIEHLQKLIRNTPFQVDLIDRTMERYSNKKTRRYKQSSSRSKRVRNTFFGTSAALVVAFALVVSTGFISPTMALSLKQIPGIDSIFQLAGDLGLQTADEKGLVSKPNLSDTHDGLTLSVPEVMFDGTRVSIALERQTTDKRFLNTELPLLLDDLIFFINGEEINSSYAPANTTNSIDPYMIPGKNKNSTIIQFSDLRNQGGKSFPDKFDLTISMPVSGIKQPFKIEIPVEKNTKNNLTFTPSLKRKYKNIDYTLEKIEITPITTSITTRIKLPDNLKISSSLPFLSYEIYDDKGKQLNFISNNGWSATDGNVLISDSRFEPFTSLPKAITIKVYKTILKKDDKSKFELDKDGNPKIEYFPDLEITYPINP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAQ9</accession>
    <name>E3EAQ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">AtCs1C4</name>
        <name evidence="5" type="ORF">PPSC2_22890</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373355.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10365"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58817">
        <property type="protein sequence ID" value="ADO58817"/>
        <property type="gene ID" value="PPSC2_22890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4847"/>
    <dbReference type="eggNOG" id="COG1215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020629_0_0_9"/>
    <dbReference type="OMA" id="PFYWDKT"/>
    <dbReference type="OrthoDB" id="724641at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037257">
        <property type="entry name" value="T2SS_E_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007831">
        <property type="entry name" value="T2SS_GspE_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13632">
        <property type="entry name" value="Glyco_trans_2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05157">
        <property type="entry name" value="T2SSE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160246">
        <property type="entry name" value="SSF160246"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="359"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="382"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="732"/>
            <end position="751"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="771"/>
            <end position="792"/>
        </location>
    </feature>
    <feature type="domain" description="T2SSE_N" evidence="3">
        <location>
            <begin position="231"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="4">
        <location>
            <begin position="516"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="14"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="819" mass="93503" checksum="045D97533D49E8B8" modified="2011-01-11" version="1">MGDKLRWQVGGVSIRQTKRRIKEERQRIEQLQQQLEAQRAEQAPILYKLDFHIEELERRLRDTELRIQAIQNANDTAAAVEQLLDEGIQDGQVQEAQVQYASGQEQAAAGAAMGLASSIPGAEGGEAAAGTQTGRNGKARLGDQLVENGMITRDQLTDAIRNQKRYGGRLGDILVEMGFITAEQLQEQIDGDESKERLGDMLVRSGYITPEQLERALEFQAKSGGLLGDILLSLQMLEPADLYRAIATQNRIGRIGEELALDAAYKLPEQVAMAYGVVVIHQYMNRYIVAVSDPLPEERRLKLEEILGMPVEQVLATKEEMEQLWGKIYGEEMMQESTTGLLEKEPHNSARTTFTKGQLWVFAAMGMITLLGLLWNSWKTVLIINMMIQLFYFAMTLFKFGIIYLGSRRGAQLRFTKEEVDAMDEKRLPIYTILVPMYKEAGVLPMLLRNLEQLDYPKSKLDVRLLIEEDDIETIELLREMKLPAYYTTLVVPDGLPKTKPKACNYGLIRARGEFVVIYDAEDRPDADQLKKVIAAFDSLPENYACIQAKLNYFNSTQNLLTRWFTQEYSMWFELLLPGIMQLDTPIPLGGTSNHFRVSVLKDINAWDPYNVTEDADLGIRLYKGGYKTAIVDSRTWEEANSRVGNWIRQRSRWIKGYMQTWLVHMRNPVKLVREVGWKGFFGFQVMILATPMLPLLNPIFWGLLILWFGWELSFIPKLFPGYVYYLASAEFYIGNFLFVFSNVAGMYWVIGELEERGERTFSYAMVKYGLLSPLYWVLMSIAAIKAAWQLITKPFYWEKTTHGLTDMHDLDDAPAQSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAS0</accession>
    <name>E3EAS0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cobalamin biosynthesis protein CbiE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cobL</name>
        <name evidence="7" type="ORF">PPSC2_23670</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373520.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11175"/>
    <dbReference type="EnsemblBacteria" id="ADO58984">
        <property type="protein sequence ID" value="ADO58984"/>
        <property type="gene ID" value="PPSC2_23670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5010"/>
    <dbReference type="eggNOG" id="COG2241">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2242">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031955_1_2_9"/>
    <dbReference type="OMA" id="MPVTQWS"/>
    <dbReference type="OrthoDB" id="1706318at2"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008276">
        <property type="term" value="F:protein methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd11644">
        <property type="entry name" value="Precorrin-6Y-MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012818">
        <property type="entry name" value="CbiE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006365">
        <property type="entry name" value="Cbl_synth_CobL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014008">
        <property type="entry name" value="Cbl_synth_MTase_CbiT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036428">
        <property type="entry name" value="CobL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02467">
        <property type="entry name" value="CbiE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02469">
        <property type="entry name" value="CbiT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="6">
        <location>
            <begin position="7"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="418" mass="45357" checksum="886DDF411929B7FC" modified="2011-01-11" version="1">MSRVIRVIGIGENGAAGLSQETLEQIERADLLVGGERQLAFFEAAAGEKRTLKSGLSAVVEELGRLREHKDIVVLASGDPLFFGIAGYLSAKLGAEHLDILPHLSSVQLAFARLGESWQDAVLESVHGRPMTGLAQRIDGQNKIALLTDDRNHPAAVAAYLLHFGMTEYDAFVGEHLGGPDETYRHYTLEEMAQGTFQPLNVVVLRRRKGEDVPAIRRGFGFEDAEFHQRKPEKGLITKREVRVFSLSELRLTERSIVWDIGAGSGSVAVECARLAKYGQVFAIEKNEGDLANVEANKIKFRTDFPVIHAKAPAGLDELPDPDAVFIGGSGGELAELIRLCASRLRKDGRIVVNAATIETLHDGMKAMQAAGLETSVTLLQTARSKPILNMTRFDGLNPIYVITGQPSVDVADGATGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAZ8</accession>
    <name>E3EAZ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373811.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5341"/>
    <dbReference type="EnsemblBacteria" id="ADO59278">
        <property type="protein sequence ID" value="ADO59278"/>
        <property type="gene ID" value="PPSC2_24990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5296"/>
    <dbReference type="eggNOG" id="COG2013">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040551_2_1_9"/>
    <dbReference type="OMA" id="YASEMNI"/>
    <dbReference type="OrthoDB" id="1063432at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002838">
        <property type="entry name" value="AIM24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036983">
        <property type="entry name" value="AIM24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016031">
        <property type="entry name" value="Trp_RNA-bd_attenuator-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01987">
        <property type="entry name" value="AIM24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51219">
        <property type="entry name" value="SSF51219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="26812" checksum="CC913610E01C6B32" modified="2011-01-11" version="1">MAFVINNLKDNSNVAITDQLGGFTVLEYITDLSCTSVAAAKDNYYMSKSNMRRKQLMIEINNSEIMMRAGAMQYTVGSMEMTTGVKGVGGLMRNLVSGAVTGTGAIKPHYKGTGTIMLEPTYQYIWLIDVDNDDIAIEDGLFLACDATLDISVVARSNLSSAALGGEGLFNLSARGKGVLALQAPIPSDEAVVIELQNDVLKVDGNFALMWSNTLQFTVEKSGKTKMGSAASGEGLVNVYRGTGNVWLAPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBH8</accession>
    <name>E3EBH8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rbsR3</name>
        <name evidence="6" type="ORF">PPSC2_22050</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58652.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09200"/>
    <dbReference type="EnsemblBacteria" id="ADO58652">
        <property type="protein sequence ID" value="ADO58652"/>
        <property type="gene ID" value="PPSC2_22050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4692"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58652.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="36998" checksum="2642C5E3A6860C9D" modified="2015-05-27" version="2">MATIHDVALKAGVSVTTVSRVMNNRGYISETTRKKVFDAMEELNYQPNEIARSLLRKQSNIIGLIIPNVSHPFFSELANQVEYYAYQQGCKVLLCNSHMDPVKEKVYIDMLKRNRVDGIIMGSHTLEVEEYRHLNSPIVTFDRQIDPYIPYISSDNYRGGELATELLIRKGSRKIAHICGNLELNMLSNERTKAFKDVVDRHSIEHVIVQTDLNVFDQKEYERMISKLVHEHPDVDGVFATSDIIAAFALKEYIRAGRHVPENVRIVGFDDVSAASWLTPELTSVRQPIAEIGRLAVELIRRQAEGEQVQPVNRLPVELIERATT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM9</accession>
    <name>E3EBM9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fliC</name>
        <name evidence="6" type="ORF">PPSC2_23030</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373385.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4907"/>
    <dbReference type="EnsemblBacteria" id="ADO58847">
        <property type="protein sequence ID" value="ADO58847"/>
        <property type="gene ID" value="PPSC2_23030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4878"/>
    <dbReference type="eggNOG" id="COG1344">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011142_2_0_9"/>
    <dbReference type="OMA" id="FEHTINN"/>
    <dbReference type="OrthoDB" id="636786at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042187">
        <property type="entry name" value="Flagellin_C_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00700">
        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00669">
        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00207">
        <property type="entry name" value="FLAGELLIN"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="3"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="189"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="29179" checksum="EFCB99ACAFFA44FF" modified="2011-01-11" version="1">MIINHNIAAMNTHRQLAVNTGNTNKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDMASKNAQDGISLIQTAEGALNETHSILQRMRELSVQSANDTNTTVDRGALQKEVDELSKEITRISSTTEFNTKKLLDGTASGVVFHIGANTGQNISLSIGSMDASTLGVAQSATSGIDISTQTAADAAISTINAAIETVSGERAKLGANQNRLEHTINNLNTSSENLSAAESRIRDVDMAKEMMNQTKNNILAQAAQAMLAQANQQPQGVLQLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBT5</accession>
    <name>E3EBT5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yhcK3</name>
        <name evidence="8" type="ORF">PPSC2_24020</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373594.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11525"/>
    <dbReference type="EnsemblBacteria" id="ADO59059">
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    </dbReference>
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        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
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        <property type="entry name" value="Sig_transdc_His_kinase_LytS_TM"/>
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        <property type="entry name" value="5TM-5TMR_LYT"/>
        <property type="match status" value="1"/>
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    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="39"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="136"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="160"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="7">
        <location>
            <begin position="226"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
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    </evidence>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
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    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59059.1"/>
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    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="358" mass="39853" checksum="4E2D498FD83E3905" modified="2011-01-11" version="1">MLKELINNFALLTSFLFFGNLFSRKYERYLTNHALIHQVMNGLMLGLFGILLMMTGLWIHGHFVVDLRQLAIIISVYIGGTISGLLTTLIVILYRIYITGGWTDISLTATVNCFVTLVVSLIFIREKKLTLSKWMSAVLGAVVVSLLSTFFVANPPNLETIIMITTVKILGGLFTYFMMSHIKKTERAIHLLEEAANRDHLTGLYSPRAFDALFEEVLHASKTTKKPFGLVMLDIDHFKKINDTYGHLNGDAVLSQLGILLNRESTTRAYPSRKGGEEFAILLGDCDTEKAASFAEKIRKAVENECFLLNDGTIISLTVSIGAGSSPAIVSRRLLEKADEALYEAKRSGRNRVELAKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW0</accession>
    <name>E3EBW0_PAEPS</name>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5146"/>
    <dbReference type="EnsemblBacteria" id="ADO59084">
        <property type="protein sequence ID" value="ADO59084"/>
        <property type="gene ID" value="PPSC2_24120"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.5107"/>
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    </dbReference>
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    <dbReference type="OrthoDB" id="1415498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006603">
        <property type="entry name" value="DinF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
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        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
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        <location>
            <begin position="60"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
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        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
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        <location>
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        <location>
            <begin position="290"/>
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        </location>
    </feature>
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        <location>
            <begin position="322"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="395"/>
            <end position="414"/>
        </location>
    </feature>
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        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="469" mass="51804" checksum="87EE53D08A1C434F" modified="2011-01-11" version="1">MTTRALKNGSVLSEAKELNLFRLTWPIFLELFLFMLMGSVDTFMLSSVSDNAVSGVGASNQIISIAILVLEVIGNGAAIVVAQYIGSKKLVEAAQVTGTAITLNLMVGLLLSVIFLVFGTHMLQWLNVQGDILTYAESYMSIVGGAIFLQALINSLAATIRTHGFTKETMYVSVFMNVIHVVGNYVLILGHWGMPALGVEGAAISTVGSRFICLLIFFWLMYRVTEVRVEWKYYVHLSRKFITKILRIGVPSALESIMYQSCQLIFTLYVTYLGAEAMATRQYANNISSYIYLFSMAVGMGTAIVVGRLVGAREKDTAYKRVLSSVKWALLVTVIIDAVVIFFRVPLLGLFTENPEIIRLGAQVILLSILLETGRTTNIVIINSLRAAGDAKFPVFMGLISMVCMSLPLGYLLVFKLDMGLAGVWLAIAADEWTRAVIMYARWRSRLWERHSLVEHDTPDQPATPVPAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW9</accession>
    <name>E3EBW9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pstB13</name>
        <name evidence="5" type="ORF">PPSC2_24165</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11685"/>
    <dbReference type="EnsemblBacteria" id="ADO59093">
        <property type="protein sequence ID" value="ADO59093"/>
        <property type="gene ID" value="PPSC2_24165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5116"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="IPCFAKR"/>
    <dbReference type="OrthoDB" id="1833499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="27153" checksum="3F0287B906D79438" modified="2011-01-11" version="1">MSDFLLEVNQVTKKMGKRNLLNNISFKLQKGKIYGFIGPNGAGKTTMMRIMTGLMKPTSGSVQIASYNVHTDREKALSKVGAIIESPVFFDYMTGRQVLRNLSRLHSEIASSDREAHIEELLTKVRLETRGDDKVKTYSLGMKQRLGIAQSMLGTPELLLLDEPSNGLDPMGMRELRDIVLGLRNSANYAFFISSHLLDELQQMCDELIVIKEGRLVWQGPTDQLIKEGQRLEDAFMGLMGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC50</accession>
    <name>E3EC50_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Protein jag</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">jag</name>
        <name evidence="8" type="ORF">PPSC2_25505</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373920.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13000"/>
    <dbReference type="EnsemblBacteria" id="ADO59390">
        <property type="protein sequence ID" value="ADO59390"/>
        <property type="gene ID" value="PPSC2_25505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5405"/>
    <dbReference type="eggNOG" id="COG1847">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042512_0_0_9"/>
    <dbReference type="OMA" id="MLDIASW"/>
    <dbReference type="OrthoDB" id="1304273at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02414">
        <property type="entry name" value="jag_KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02644">
        <property type="entry name" value="R3H_jag"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.30.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038008">
        <property type="entry name" value="Jag_KH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038247">
        <property type="entry name" value="Jag_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039247">
        <property type="entry name" value="KhpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032782">
        <property type="entry name" value="KhpB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001374">
        <property type="entry name" value="R3H_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036867">
        <property type="entry name" value="R3H_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034079">
        <property type="entry name" value="R3H_KhpB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35800">
        <property type="entry name" value="PTHR35800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14804">
        <property type="entry name" value="Jag_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01424">
        <property type="entry name" value="R3H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01245">
        <property type="entry name" value="Jag_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00393">
        <property type="entry name" value="R3H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82708">
        <property type="entry name" value="SSF82708"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51061">
        <property type="entry name" value="R3H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="R3H" evidence="7">
        <location>
            <begin position="187"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="61"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="61"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="27946" checksum="DB76C277EA5AB751" modified="2011-01-11" version="1">MTKVVTSGKTVEDAVRQGLSQLGVSRERVTVNVLEQPSKGFLGWLGVKKAKVELTLLSEPSPETTHTAEPHVSAQAPSDVGQAVSQAGSVAQEAQRNMEASRGHIDPYEEAVRFIRETAAGMGLDVEVDVRHRKDESTLDISGPSLGMLIGRRGQTLDALQYLTNIVANRHSDKFIRIVLDAEQFRARRRKTLEDLAERLANQAVRYGKEVVLEPMPSQERKLIHAKLQQHALVRTYSKGDEPNRRVVIAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECD2</accession>
    <name>E3ECD2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_01440</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368917.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14155"/>
    <dbReference type="EnsemblBacteria" id="ADO54275">
        <property type="protein sequence ID" value="ADO54275"/>
        <property type="gene ID" value="PPSC2_01440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.285"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_0_9"/>
    <dbReference type="OMA" id="INHVRYG"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="309"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="329"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="604" mass="68384" checksum="E8162D0BC46F9EBA" modified="2011-01-11" version="1">MKRYIHKIKYQGLFFKIFIVMVISITAVSLLTSLVTIRMSERLFAETFSITNAKVLSQIQSSFESFNDSIVNAVTHASENGTVKNYLTGGQSDSINSARIYFGMAQQMKQIKSNVDAYDVGVAVTGMNGRSFYSDSSYWPVTAEQLKSSSITARSVARPAQLMYQMDTELFHQQMNSTAQKPTPYIIASKVFMERTSGTMYGMIYIAIREPEFRRFYNNFTSNGNDVLIMDKSGLIVSSNRQDLIGQRSSELLGYATKINEQGLNYINADVMNKESIVLSNYIPSFDFYLVNMIDRQTAVGQIIDVKSVVWICIAIVLIALVIVFLISRRLIRSLTRLVKQMSTIREKNFDNYIPVTGSYEVRQLSHAYNYMLDELNDYIRKLLETQKGQRNAELAALQRQINPHFLYNTLASIKMLVLKGNKETAAETINALISLLQNTISNVSETITIEQEMANMQNYVFINHVRYGQRVQVNYFVSPDCLEYHVPKLIIQPFIENSFFHAFNEKNAGHIYILVSKTDDTLICEVVDDGDGMDLDGHTVQDGLPNPKSKRQLFTGIGIQNVHNRITLLYGEEYGVTISSKKGEGTKVRMTLPLILKPVPPTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED00</accession>
    <name>E3ED00_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Endo-alpha-(1-&gt;5)-L-arabinanase</fullName>
            <ecNumber evidence="3">3.2.1.99</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">abnA</name>
        <name evidence="7" type="ORF">PPSC2_04375</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>Endohydrolysis of (1-&gt;5)-alpha-arabinofuranosidic linkages in (1-&gt;5)-arabinans.</text>
            <dbReference type="EC" id="3.2.1.99"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Glycan metabolism; L-arabinan degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the glycosyl hydrolase 43 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.99" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17205"/>
    <dbReference type="CAZy" id="GH43">
        <property type="family name" value="Glycoside Hydrolase Family 43"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54869">
        <property type="protein sequence ID" value="ADO54869"/>
        <property type="gene ID" value="PPSC2_04375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.873"/>
    <dbReference type="eggNOG" id="COG3507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009397_5_1_9"/>
    <dbReference type="OMA" id="GHLWAPD"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="UniPathway" id="UPA00667"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046558">
        <property type="term" value="F:arabinan endo-1,5-alpha-L-arabinosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031222">
        <property type="term" value="P:arabinan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006710">
        <property type="entry name" value="Glyco_hydro_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016840">
        <property type="entry name" value="Glyco_hydro_43_endo_a_Ara-ase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04616">
        <property type="entry name" value="Glyco_hydro_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF026534">
        <property type="entry name" value="Endo_alpha-L-arabinosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168836" description="Endo-alpha-(1-&gt;5)-L-arabinanase" evidence="6">
        <location>
            <begin position="36"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity, responsible for pKa modulation of the active site Glu and correct orientation of both the proton donor and substrate" evidence="5">
        <location>
            <position position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR026534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR026534-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="35450" checksum="C063A28DDE94AD27" modified="2011-01-11" version="1">MLKAWKKSVQGKFARTAFAAVTSAALLLSVVPSTSAEHWALTGDVAVHDPSITKEGNAWYIFSTGQGIQVQRSDDGRNFYRLPQIFLSPPSWWKSYVPKQKTNDVWAPDAQKYNGRVWVYYSISTFGSRTSAIGLTSATSIGAGSWRDDGLVLRTTDSDDYNAIDPNLVIDASGNPWLSFGSWNSGLKVTRLDKNTMKPTGQIYSIARRTAGGLEAPHVTYRNGYYYLFASIDNCCKGVDSNYKIIYGRSTSITGPYVDKSGKSLMDGGGTILDAGNDRWKGPGGQSVYNNSVIARHAYDATDGGNPKLLISDLKWDSAGWPTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDB4</accession>
    <name>E3EDB4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">RNA methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yefA</name>
        <name evidence="8" type="ORF">PPSC2_04475</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369526.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17305"/>
    <dbReference type="EnsemblBacteria" id="ADO54893">
        <property type="protein sequence ID" value="ADO54893"/>
        <property type="gene ID" value="PPSC2_04475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.896"/>
    <dbReference type="eggNOG" id="COG2265">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014689_7_0_9"/>
    <dbReference type="OMA" id="FYAGDMK"/>
    <dbReference type="OrthoDB" id="1421660at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034470">
        <property type="term" value="P:ncRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030390">
        <property type="entry name" value="MeTrfase_TrmA_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030391">
        <property type="entry name" value="MeTrfase_TrmA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002792">
        <property type="entry name" value="TRAM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010280">
        <property type="entry name" value="U5_MeTrfase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11061">
        <property type="entry name" value="PTHR11061"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01938">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05958">
        <property type="entry name" value="tRNA_U5-meth_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51687">
        <property type="entry name" value="SAM_MT_RNA_M5U"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50926">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01230">
        <property type="entry name" value="TRMA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01231">
        <property type="entry name" value="TRMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TRAM" evidence="7">
        <location>
            <begin position="106"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="60"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="541"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="541"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="416"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="445"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="466"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="514"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="585" mass="64832" checksum="8076CFFF6CF560CB" modified="2011-01-11" version="1">MTNNRSGRGKSRRNTATATPVPGKQHNKTMQAKKDRELEQSPVGAGNRMLRAGTENKNGNTDDFPRKKGENERKPRRFSKNERSNDGRSQEASNRKRSSAERSDLPVQKNDEAVIDIIGMNHDGEGVGRVEGFTLFVPGALPGEKVRVKVLKTKKQYGYAKLLDIAQASPDRIAAPCAIYDQCGGCQLQHMSYEAQLGWKRQHVVDVLERIGKLSVTTESSERTAEVLADSADGNADHMSRVQGVVVHPTLGMSEPWRYRNKAQVPIGVAEGGLVGGFYARGSHRIVDMNTCLIQDERNDEVVARVKEIGRMLGISAYNEETGRGLLRHVVVKTAFRTGEMMLVLVTNGRDIPHADAWIGSIREHIPHVASICQNVNTKRTNVIFGDETRVLWGRDVIYDYIGNVQFAISARSFYQVNPVQTEVLYSKTVEYAGLTGKETVIDAYCGIGTISLFLAQHADQVYGVEIVKEAIDDARSNALLNEMRNVKFEVGASEDVIPAWKEQGITADVIVVDPPRKGCDPRLLDTILEMKPERVVYVSCNPSTLARDLRILEDGGYSTVEVQPVDMFPHTVHVESVALLVRKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE1</accession>
    <name>E3EDE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fatty acid desaturase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">des</name>
        <name evidence="3" type="ORF">PPSC2_04595</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369553.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17490"/>
    <dbReference type="EnsemblBacteria" id="ADO54920">
        <property type="protein sequence ID" value="ADO54920"/>
        <property type="gene ID" value="PPSC2_04595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.923"/>
    <dbReference type="eggNOG" id="COG3239">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043118_0_0_9"/>
    <dbReference type="OMA" id="FSLMHDC"/>
    <dbReference type="OrthoDB" id="1032884at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005804">
        <property type="entry name" value="FA_desaturase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012171">
        <property type="entry name" value="Fatty_acid_desaturase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19353">
        <property type="entry name" value="PTHR19353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00487">
        <property type="entry name" value="FA_desaturase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="185"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="209"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="FA_desaturase" evidence="2">
        <location>
            <begin position="53"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="353" mass="40401" checksum="7E62B64BF9B0A3D3" modified="2011-01-11" version="1">MGMTQLPLAQLKKNMAPYEKINTKSSVLQLINTLGPLILLWYAAYLSLAVSYWLTLPITIIAAGFVVRTFIIFHDCGHQSFFKSRKLNDIVGTITGIITLCPYHQWKNSHAIHHATSSNLDKRGTGDMWVLTVEEYTAASTWTRLAYRIYRNPWVMFGLGPIYTFLISYRFNVKTAKHKEKINTYVTNISIVALYALLCWAIGWQAFLLVQTPIFFVSGMLGIWLFYVQHQFEDSYFEHDEEWSYINAAVEGSSYYKLPKVLQWITGNIGFHHVHHLSPKVPNYNLEKAHEATPLLQKATTITVSSSLQSLKFRLWDESTKTFLTFKQVKPLLSKRVGASKPIPTPVVGTDRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDY3</accession>
    <name>E3EDY3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nicotinate-nucleotide diphosphorylase (carboxylating)</fullName>
            <ecNumber evidence="4">2.4.2.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Quinolinate phosphoribosyltransferase [decarboxylating]</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">nadC</name>
        <name evidence="12" type="ORF">PPSC2_00300</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the catabolism of quinolinic acid (QA).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate D-ribonucleotide from quinolinate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the NadC/ModD family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.19" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368696.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13315"/>
    <dbReference type="EnsemblBacteria" id="ADO54049">
        <property type="protein sequence ID" value="ADO54049"/>
        <property type="gene ID" value="PPSC2_00300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.59"/>
    <dbReference type="eggNOG" id="COG0157">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039622_0_1_9"/>
    <dbReference type="OMA" id="DMIMLKD"/>
    <dbReference type="OrthoDB" id="1718114at2"/>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00331"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004514">
        <property type="term" value="F:nicotinate-nucleotide diphosphorylase (carboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01572">
        <property type="entry name" value="QPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004393">
        <property type="entry name" value="NadC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027277">
        <property type="entry name" value="NadC/ModD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036068">
        <property type="entry name" value="Nicotinate_pribotase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037128">
        <property type="entry name" value="Quinolinate_PRibosylTase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002638">
        <property type="entry name" value="Quinolinate_PRibosylTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022412">
        <property type="entry name" value="Quinolinate_PRibosylTrfase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32179">
        <property type="entry name" value="PTHR32179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01729">
        <property type="entry name" value="QRPTase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02749">
        <property type="entry name" value="QRPTase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006250">
        <property type="entry name" value="NadC_ModD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51690">
        <property type="entry name" value="SSF51690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00078">
        <property type="entry name" value="nadC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="QRPTase_N" evidence="11">
        <location>
            <begin position="31"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="QRPTase_C" evidence="10">
        <location>
            <begin position="121"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR006250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="296" mass="32460" checksum="DC7D2E648144AEC3" modified="2011-01-11" version="1">MTSNSELYGEFSGYQEELTAQIRSWLREDTGSGDVTTRWTIEPGHQSKAVIHAKESGVIAGLPVAEIVFRVVDPSLSFTPLVTDGQWIEKGSVLAEVSGSTHAILTGERLALNLLQRMSGIATRTRTFIDQLHGLSTRLVDTRKTTPGHRLLEKYAVRVGGGSNHRFGLYDAVMIKDNHIKGAGGIAQAVSRARAHIPHTMTIEVETENMTQVREALEAGADIIMLDNMSVPDMKEAVRFIREQAPHVKTEASGNVSLDTVREMAESGVDVISVGRLTYSFHNLDISLDLNAKKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDZ6</accession>
    <name>E3EDZ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gntR3</name>
        <name evidence="5" type="ORF">PPSC2_02505</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369116.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15240"/>
    <dbReference type="EnsemblBacteria" id="ADO54476">
        <property type="protein sequence ID" value="ADO54476"/>
        <property type="gene ID" value="PPSC2_02505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.485"/>
    <dbReference type="eggNOG" id="COG1802">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_5_5_9"/>
    <dbReference type="OMA" id="VFEMRSA"/>
    <dbReference type="OrthoDB" id="1911275at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="11"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="26370" checksum="9440A5BE0C13E205" modified="2011-01-11" version="1">MKYPTTWLQGASLGERIACELRLQIIRGMQTPGTVLSENQIATDFGTSRSPVREAMKVLSGEGLIRLERMGAVVIGMTPGDMEELFDVRMLIEHFVVQRYVHRDNTILVTTLNQMIDKMEVALKHRDIAEFSLQDFNFHEALVLEAGHTRILHTWNGMRQLILTVMLAATEQRFASNIEESQVTIRKHRTFANALNQANAQELSRLIDEHYRDTRNAVNDSVLSSYRKTLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE34</accession>
    <name>E3EE34_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">frlR1</name>
        <name evidence="2" type="ORF">PPSC2_02780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369154.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15580"/>
    <dbReference type="EnsemblBacteria" id="ADO54514">
        <property type="protein sequence ID" value="ADO54514"/>
        <property type="gene ID" value="PPSC2_02780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.524"/>
    <dbReference type="eggNOG" id="COG2188">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063236_4_2_9"/>
    <dbReference type="OMA" id="QVVPTHN"/>
    <dbReference type="OrthoDB" id="1775418at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="9"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="27767" checksum="C6D654B06818E2E9" modified="2011-01-11" version="1">MNLNPSTPQPLYMQIRQMLKNDIQDGRYKPDEQIPTEAELCDTYSVSRITIRKAIEELVREGTLTRIPRRGTFVASNKFHNELLSVSGFSEFSHQLGMIPNSRILRSEVIPASEEVAVHLLIEEGSPVLELERLMYVDDRPLFYDIAHYSLTRFPDLEKKIAMKESTYKILSEDYNTEIVSNDKIIDVIGATKDYAKLLECDIGANLFRILKIAFDANDEPVHLSTFMCETNRVNLTVHRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB0</accession>
    <name>E3EEB0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplC3</name>
        <name evidence="7" type="ORF">PPSC2_05140</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369666.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18065"/>
    <dbReference type="EnsemblBacteria" id="ADO55033">
        <property type="protein sequence ID" value="ADO55033"/>
        <property type="gene ID" value="PPSC2_05140"/>
    </dbReference>
    <dbReference type="GeneID" id="66573926"/>
    <dbReference type="KEGG" id="ppm:PPSC2_05140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1041"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="WYPLTLG"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="183"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="259"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="75"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="32816" checksum="E763AE1CBFCCB677" modified="2011-01-11" version="1">MHVKHSNLDRFILGVNYIVLTLAVLIIVVPLGYIVIASFMDPTVLLSKGLSFRISDWSVEGYRKILSNPAMLRGFANSVFYSSCFALISVTVSICAGYALSVNSLVGRNFFMTLFIITMFFSGGLIPTYLLVKNLGMLDTVWAILLPGAINVWDLILARTFFKGVPNELKEAANVDGASDWTIFFRIVLPLSKPIIFVIALYAFVGQWNSYFDAMIYLDNAQLHPLQLVLRSILIQNQTMPGMISDQLAMAELKRLSEMIKYSSIVISSLPLLVMYPFFQKYFEKGVMVGSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN5</accession>
    <name>E3EEN5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Phosphate transport system permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">pstC</name>
        <name evidence="11" type="ORF">PPSC2_08265</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370343.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20870"/>
    <dbReference type="EnsemblBacteria" id="ADO55722">
        <property type="protein sequence ID" value="ADO55722"/>
        <property type="gene ID" value="PPSC2_08265"/>
    </dbReference>
    <dbReference type="GeneID" id="66573352"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1737"/>
    <dbReference type="eggNOG" id="COG0573">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033621_1_0_9"/>
    <dbReference type="OMA" id="VIRMSVL"/>
    <dbReference type="OrthoDB" id="1325025at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011864">
        <property type="entry name" value="Phosphate_PstC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02138">
        <property type="entry name" value="phosphate_pstC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="87"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="127"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="164"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="282"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="91"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="33369" checksum="BC640A6C558A03F2" modified="2011-01-11" version="1">MEPIEGKAYMEQNKRSRVMKERHYWEEWTGRIYTSVCVVFLVAVIVSIVYFVASKGVATFAVNGVSLREFFFGTKWSPDGEPKSFGALPFITGSFAVTILAALIASPLSLCAALFMTEIVPKSGKRILQPAIELLSGIPSVVYGFVGLTVIVPLLRNVFGGQGIGILAGCLVLSVMILPTITSIMADALSSLPGGLRESSYALGATRWQTIARVIIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHIPHSLLESASTLTSVITLSMGNTAMGSVHNNALWSMALVLLLMTFIFVLLVRLLERRNRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP4</accession>
    <name>E3EEP4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Malate dehydrogenase</fullName>
            <ecNumber evidence="3">1.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 9" type="primary">mdh</name>
        <name evidence="9" type="ORF">PPSC2_08310</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the reversible oxidation of malate to oxaloacetate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(S)-malate + NAD(+) = H(+) + NADH + oxaloacetate</text>
            <dbReference type="Rhea" id="RHEA:21432"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.37"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the LDH/MDH superfamily. LDH family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the LDH/MDH superfamily. MDH type 3 family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.37" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370351.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20915"/>
    <dbReference type="EnsemblBacteria" id="ADO55731">
        <property type="protein sequence ID" value="ADO55731"/>
        <property type="gene ID" value="PPSC2_08310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1746"/>
    <dbReference type="eggNOG" id="COG0039">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045401_2_1_9"/>
    <dbReference type="OMA" id="MGWTSQA"/>
    <dbReference type="OrthoDB" id="870724at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030060">
        <property type="term" value="F:L-malate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01339">
        <property type="entry name" value="LDH-like_MDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00487">
        <property type="entry name" value="Malate_dehydrog_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011275">
        <property type="entry name" value="Malate_DH_type3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000102">
        <property type="entry name" value="Lac_mal_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00086">
        <property type="entry name" value="LLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="SSF56327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01763">
        <property type="entry name" value="MalateDH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0520">NAD</keyword>
    <keyword evidence="3 6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Ldh_1_N" evidence="7">
        <location>
            <begin position="7"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="Ldh_1_C" evidence="8">
        <location>
            <begin position="152"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3 4">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="12"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="123"/>
            <end position="125"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="125"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="33538" checksum="0F41EFE239858B82" modified="2011-01-11" version="1">MTIQRKKISIVGAGFTGATTALLLAQKELGDIVLIDIPQLENPTKGKALDILEAGPVQGFDTQIMGTSNYEDAADSDIVIITAGIARKPGMSRDDLVNTNAGIVKSVCENVKKYAPDSIVIILSNPVDAMTYTAYQTLDFPKNRVIGQSGVLDTARYCTFIAQELNVSVEDVRGFVMGGHGDDMVPLVRYSSVGGIPIENLISQERIKAIVQRTRVGGGEIVNLLGNGSAYYAPAASLAQMTEAIVKDKKRIIPVIAYLEGEYGYQDLFLGVPTLLGGNGIEKVFELELTAEEKAALDESAEAVRNVTKIVNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEV1</accession>
    <name>E3EEV1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase-thioesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fusTE</name>
        <name evidence="2" type="ORF">PPSC2_00420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368720.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13435"/>
    <dbReference type="EnsemblBacteria" id="ADO54074">
        <property type="protein sequence ID" value="ADO54074"/>
        <property type="gene ID" value="PPSC2_00420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.84"/>
    <dbReference type="eggNOG" id="COG0596">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_9_0_9"/>
    <dbReference type="OMA" id="ISRLWAS"/>
    <dbReference type="OrthoDB" id="1119700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="65"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="344" mass="38683" checksum="59F440F859FFD359" modified="2011-01-11" version="1">MKQRRRTWTRVVFGVISCLLLVVISGFVYESIASKHDKSQYPPLGRMVDAGGYRLHIHKIGAGSPTIVLESGSGESSLSWRDIPEKLSSFATVVSYDRAGYAWSEEANTPRTGENIVRELHTALKNADIQPPYIFVGHSLGGMYSRLYAQTYRNEVAGLVLVDARPENDARRTNKIYAKERPKGNPSPLISILLEKAGAFRLFPNFMLNGRVEYRDRKSFVNIVASPKYFRSVAEEGDLASTTEDAIRGQHLGNLPVRVIARGIQQDLTQFGISKRGNDQIEQSWQIGQREMLNISTNSKFIVAKKSEHMIIHDQPELVIQVIRELISNIHYSRSTVAKTNTDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF04</accession>
    <name>E3EF04_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">CTP synthase</fullName>
            <ecNumber evidence="9">6.3.4.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Cytidine 5'-triphosphate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Cytidine triphosphate synthetase</fullName>
            <shortName evidence="9">CTP synthetase</shortName>
            <shortName evidence="9">CTPS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">UTP--ammonia ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">pyrG</name>
        <name evidence="12" type="ORF">PPSC2_00685</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + H2O + L-glutamine + UTP = ADP + CTP + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:26426"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + NH4(+) + UTP = ADP + CTP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:16597"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="9">Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Pyrimidine metabolism; CTP biosynthesis via de novo pathway; CTP from UDP: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="9">CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the CTP synthase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.2" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368772.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13675"/>
    <dbReference type="EnsemblBacteria" id="ADO54127">
        <property type="protein sequence ID" value="ADO54127"/>
        <property type="gene ID" value="PPSC2_00685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.136"/>
    <dbReference type="eggNOG" id="COG0504">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011675_5_0_9"/>
    <dbReference type="OMA" id="EFNNAYR"/>
    <dbReference type="OrthoDB" id="783657at2"/>
    <dbReference type="UniPathway" id="UPA00159">
        <property type="reaction ID" value="UER00277"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003883">
        <property type="term" value="F:CTP synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044210">
        <property type="term" value="P:'de novo' CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03113">
        <property type="entry name" value="CTPS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01746">
        <property type="entry name" value="GATase1_CTP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01227">
        <property type="entry name" value="PyrG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004468">
        <property type="entry name" value="CTP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017456">
        <property type="entry name" value="CTP_synthase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033828">
        <property type="entry name" value="GATase1_CTP_Synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11550">
        <property type="entry name" value="PTHR11550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06418">
        <property type="entry name" value="CTP_synth_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
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    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 9" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CTP_synth_N" evidence="11">
        <location>
            <begin position="3"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="GATase" evidence="10">
        <location>
            <begin position="302"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="region of interest" description="Amidoligase domain" evidence="9">
        <location>
            <begin position="1"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="region of interest" description="L-glutamine binding" evidence="9">
        <location>
            <begin position="382"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; for glutamine hydrolysis" evidence="9">
        <location>
            <position position="381"/>
        </location>
    </feature>
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        <location>
            <position position="507"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
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        </location>
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        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="14"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
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        <location>
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            <position position="141"/>
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        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
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        <location>
            <begin position="148"/>
            <end position="150"/>
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        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <note>allosteric inhibitor</note>
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    <feature type="binding site" evidence="9">
        <location>
            <begin position="188"/>
            <end position="193"/>
        </location>
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    <feature type="binding site" evidence="9">
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            <begin position="240"/>
            <end position="242"/>
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        <ligand>
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        </ligand>
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        <location>
            <position position="354"/>
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        <ligand>
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        <location>
            <position position="462"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
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        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00022975"/>
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            <dbReference type="HAMAP-Rule" id="MF_01227"/>
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    </evidence>
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            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF06418"/>
        </source>
    </evidence>
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            <dbReference type="EMBL" id="ADO54127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="533" mass="58915" checksum="0E7E6F243D840DF5" modified="2011-01-11" version="1">MTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVTIQKFDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLSKNSNVTTGKVYSSVISKERRGEYLGGTVQVIPHITNEIKERVYRAGREAGSDVIITEIGGTVGDIESLPFLEAIRQLKSEVGRENVMYIHVTLIPYIKAAGEVKTKPTQHSVKELRSIGIQPNVIVCRTEHELSSDMKAKIALFCDIDANAVVECRDASTLYEVPLNLREEGLDEIVVNHLKLTTPAPDMTEWEGLVDRISKLDKTVEIAIVGKYVALHDAYLSVVESLSHAGFDANADVKIRWVNAEEVTDENVADMLGGIGGILVPGGFGDRGIEGKISTIRYAREQKIPFFGICLGMQVSVIEVARSLAGLEGANSSEINPATDYPVIDLLPDQKDIEDLGGTMRLGLYPCKLVEGSLASACYNDELVYERHRHRYEFNNEYREVIEKAGLRISGTSPDGRLVEIVELPEHPWFLAVQFHPEFTSRPNRPQPLFREFVKAALQLQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF16</accession>
    <name>E3EF16_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RNA polymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sigW3</name>
        <name evidence="4" type="ORF">PPSC2_02875</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="STRING" id="1406.LK13_15690"/>
    <dbReference type="EnsemblBacteria" id="ADO54536">
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    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.547"/>
    <dbReference type="eggNOG" id="COG1595">
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    <dbReference type="HOGENOM" id="CLU_047691_3_1_9"/>
    <dbReference type="OrthoDB" id="1914729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="P:response to stimulus"/>
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        <property type="project" value="UniProt"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RNA_pol_sigma-70-like"/>
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        <property type="entry name" value="RNA_pol_sigma70_r2"/>
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        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
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        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="sigma70-ECF"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
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            <begin position="23"/>
            <end position="88"/>
        </location>
    </feature>
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        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF04542"/>
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    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54536.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="20544" checksum="73F59E6ABF586CD5" modified="2015-05-27" version="2">MNLETILHQARNGDRKAFVALMKHMESDMYGMARSILRSNEDCADAMQEAMLKAYKSLGELREPRYFKTWLLRILINECHLIIRKQKRVVPVAEFIKEPSTSGGYEKIELREAIDHLEESMRTVISLHYLRDMPIREISELLDLSEGAVKTRLHRARRTLMDLLQNRGERKVTFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFI3</accession>
    <name>E3EFI3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yqgE</name>
        <name evidence="3" type="ORF">PPSC2_07165</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370101.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20145"/>
    <dbReference type="EnsemblBacteria" id="ADO55474">
        <property type="protein sequence ID" value="ADO55474"/>
        <property type="gene ID" value="PPSC2_07165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1480"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054389_0_0_9"/>
    <dbReference type="OMA" id="IGYGFYW"/>
    <dbReference type="OrthoDB" id="528184at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="99"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="134"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="164"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="223"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="247"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="277"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="300"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="341"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="371"/>
            <end position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="46923" checksum="648DCF18CC242635" modified="2011-01-11" version="1">MKSNLNGQSILLLSLNGLFVFAAALSGTFLNVYLWKSRQDYAMIGWFNVSQQIALGIMVWVAGKWVKEHNKMNALRVGTALSGLFYLIVLYTGPQAVNYIWPLGMLLGAALGLFWLAFNVIFFEVTDQASRDHFNGWVGLLGSFSGIVGPWLSGWIIARMEDDAGYRVIFSISLAFYVVGVVLSFFLRKRKPTGNYNWKEPKQRLSQKGSMWRPLSLSLVTQGIREGVFAFLITLLVYVVTQQEWKLAQFSLITSGVSFFSFWAVGKWLKPHYRSAGMLLGAVLLVIALLPLLWRMEYSTLLIMGIGTALFMPLYLIPMISASFDLMGTSEGDANQRVELVVLRELCLMIGRLTGTLIFLGVLSISKAPTAMIWLLIGLALMPVIGWLFMRSVLKMEQKTKQCKSDSHARRWHKQTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFQ0</accession>
    <name>E3EFQ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cell wall assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370391.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55772">
        <property type="protein sequence ID" value="ADO55772"/>
        <property type="gene ID" value="PPSC2_08515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1789"/>
    <dbReference type="eggNOG" id="ENOG502ZBAM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137413_0_0_9"/>
    <dbReference type="OMA" id="WFHEESE"/>
    <dbReference type="OrthoDB" id="1776264at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018958">
        <property type="entry name" value="Knr4/Smi1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00860">
        <property type="entry name" value="SMI1_KNR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMI1_KNR4" evidence="1">
        <location>
            <begin position="12"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="18208" checksum="D67A58AAA364956C" modified="2011-01-11" version="1">MRLDVNTIVFPLPTDELLNVVERSLRVSFPKTYRFFIKENNGVVPVTNVFSFNHHEYIIEKFLCILNDIESDPINGWYDIEVIITQIGDRLTDNEDLVGMNVVPIAALFSGDLICLDFRETEEPTIVIWFHEESEEFSPMTQKVASNISEFFETLKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT3</accession>
    <name>E3EFT3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gapag</name>
        <name evidence="3" type="ORF">PPSC2_08655</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370424.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21130"/>
    <dbReference type="EnsemblBacteria" id="ADO55805">
        <property type="protein sequence ID" value="ADO55805"/>
        <property type="gene ID" value="PPSC2_08655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1823"/>
    <dbReference type="eggNOG" id="COG4632">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042776_0_0_9"/>
    <dbReference type="OMA" id="VTMPEFA"/>
    <dbReference type="OrthoDB" id="1587976at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018711">
        <property type="entry name" value="NAGPA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09992">
        <property type="entry name" value="NAGPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169191" evidence="1">
        <location>
            <begin position="22"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="307"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="376" mass="40551" checksum="5EB96165E26FDA20" modified="2011-01-11" version="1">MKRITALIILSMLLLVTPIYAAAPAPMLVYVDQNNHSFIPLRLLNSYEGITLNLNPADKKIEIAQGNTRLTLFTGQTVAKVNDQTIRLQNAPFTDNGATYVPLQFISQYLNLQVLWQKETSAVRITQSTKSVTLPVLTGKLPGNTTPITTAHKSFKVGSRTFSAKVVTISMLHPKVSLDVALASDTLGKVEDLSSLAKRNQAVVAINGTFFDAYTKSSYKTSYGYLVSHGKMLKKSSGDQRTVFTYDANHLAKLVSGSVFEQQLSQGSVEGALQAGPRLVTNGQVSLNVKAEGFKDPKILTGGGARSALGITRDHKLILLTTSGATIPQLAQMMKQAGAYQAMNLDGGASSGLYYNGSYLTTPGRQISNAIIVKYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFU6</accession>
    <name>E3EFU6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yiaC</name>
        <name evidence="2" type="ORF">PPSC2_08715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370437.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21190"/>
    <dbReference type="EnsemblBacteria" id="ADO55818">
        <property type="protein sequence ID" value="ADO55818"/>
        <property type="gene ID" value="PPSC2_08715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1836"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_21_2_9"/>
    <dbReference type="OMA" id="RAVNFYH"/>
    <dbReference type="OrthoDB" id="1390922at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13508">
        <property type="entry name" value="Acetyltransf_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="17016" checksum="AEFC024BB97DA825" modified="2011-01-11" version="1">MSIRPVKVEELKELVAIWLDASVEAHHFIAPQYWKSQAAEMENKYLPLAQNYVIIQDDHTIGGFVSMLDGYLAALFIRVDSQRKGYGKLLLDWVKKHHDEIQLKVYQSNTKAFNFYTKNGFTIQAESVDAETEEKEFVMIWTKHSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG53</accession>
    <name>E3EG53_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cheC</name>
        <name evidence="3" type="ORF">PPSC2_09985</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370697.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22455"/>
    <dbReference type="EnsemblBacteria" id="ADO56086">
        <property type="protein sequence ID" value="ADO56086"/>
        <property type="gene ID" value="PPSC2_09985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2103"/>
    <dbReference type="eggNOG" id="COG1776">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087860_2_0_9"/>
    <dbReference type="OMA" id="LYIETEI"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007597">
        <property type="entry name" value="CheC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028976">
        <property type="entry name" value="CheC-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04509">
        <property type="entry name" value="CheC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103039">
        <property type="entry name" value="SSF103039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CheC" evidence="2">
        <location>
            <begin position="12"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="domain" description="CheC" evidence="2">
        <location>
            <begin position="109"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04509"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="22472" checksum="ADCBE8FE22E10B55" modified="2011-01-11" version="1">MENLGNLEDFKLDVLKEVGNIGSGNAATALSRLLNKPVDMGVPKVQMLPFEEIADKVGGNEQLVVAIFFRVEGEAPGNLFFILQPQAAKSLLSRLANIPSDDEDSFNEMEHSALSEIGNILAGSYLSSLADFTRLSMYPTVPALALDMAGAILSYGLLQFGQMGDAALLIDTSFLEGQNHIEGQFFLIPDPESFGKIFRSLGVPMNDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGG6</accession>
    <name>E3EGG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Queuine/other tRNA-ribosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tgtA</name>
        <name evidence="2" type="ORF">PPSC2_01055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368837.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0207"/>
    <dbReference type="EnsemblBacteria" id="ADO54194">
        <property type="protein sequence ID" value="ADO54194"/>
        <property type="gene ID" value="PPSC2_01055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.199"/>
    <dbReference type="eggNOG" id="COG0343">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_402167_0_0_9"/>
    <dbReference type="OrthoDB" id="319185at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016763">
        <property type="term" value="F:pentosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.105">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036511">
        <property type="entry name" value="TGT-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002616">
        <property type="entry name" value="tRNA_ribo_trans-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01702">
        <property type="entry name" value="TGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51713">
        <property type="entry name" value="SSF51713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TGT" evidence="1">
        <location>
            <begin position="339"/>
            <end position="679"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="684" mass="78932" checksum="46C51E48EC00878A" modified="2011-01-11" version="1">MEKRILVVTSCTGEKVSKPENQLLFEDFQDANRLHQRESELSPYRTTAKDMYTGSQHLALMEGINLYREYGGKIDVNIISAGYGLLSENEEIVPYEVTFNNMNSQTIKNWSKRQRITETLQERIREYDLVFFLLGDKYLQSVEWPLSISSQQRLFFFAGNSSRTRVMVEENYHLLSIGEDEAKVFRFGLIGIKGFLFAQLLKQASAVGHHKIWEDLYLNPAKVRDYVMESFASKDKQLTLSDFSEKENRVDSLKASNLLNFYSELFPVPDSLIAINYKAELNFFLPENDDRVDPNYDFINDVSHKDRNPLLHDVYSHQIYGTPQYDGLLVSKVNIDNATKQKVQLIKEMGGIHKFLHLPEDFPIMGDCGAFSYISNEVPPYTTKQIIDYYDELGINYGVSVDHLVVGPFKKDLDTRQFRYELTLKRAEEFIVEYRKGTHKFHPIGIIQGWDPQSFKEAALHLINLGYDYIAIGGLAREQSGKIYEILREISPIIPNEKFRLHLFGVARDIRTMRSFHKLGVTSFDSSSPLRRAWLGTGHNYHALSGKHYTAIRIPEAKETSGRVKKMVQEGKGEFLQYKELEQSALKALRAFSNGELGLEEALSAILRYDELLGEKREVHEDLYREVLAERPWETCGCEICKTIGIDTIVFRGNNRNRRRGFHNTHVYHEQVKALRKSLDIPHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGP0</accession>
    <name>E3EGP0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">cseA</name>
        <name evidence="13" type="ORF">PPSC2_03520</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369315.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16320"/>
    <dbReference type="EnsemblBacteria" id="ADO54679">
        <property type="protein sequence ID" value="ADO54679"/>
        <property type="gene ID" value="PPSC2_03520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.689"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_6_9"/>
    <dbReference type="OMA" id="ESFNINR"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 13" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="275"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="12">
        <location>
            <begin position="296"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="11">
        <location>
            <begin position="377"/>
            <end position="589"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="336"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="589" mass="66796" checksum="D2A962DEEBCE7CC5" modified="2011-01-11" version="1">MNKRGVTFKLFIMTVVFFLCFYGMVILSQLLFFENFYQKQKIGRVESRLQSFGQSYVQEAWGSGRVSREAARFMLQNKNQLAIVTLDGKVKLDDAFHISLRKADGKVVKISLSLFMSEHGDELRAARIQPGDQVTVEGEMLGSDGISSANLIYPTGIQKLGFNNIGLNSEETSTNDSVRLSGTVTEIVLPDLKTWSQRQGLLFSALEEWFPLSQDHLERLKNFEVLEEDWTEPWTGVRNAVIVHPVRQSTGEIDLLFTVTSLQEISETNEALRWFYLYLGIGGFALILILSLFYSRMVTRPLITLNNTAKRMAKLDFTAHTPIRQNDELGSLSYSMYTLSQNLDTALRELQEANQQLVEDMEQKQRMEAVQQDFFANASHELKTPLSIIKGFAEGLQDGVSAGKQDHYMKVIVEEADKMERLVKDMLDLAKLESGTLKLRKATFILSELVEEVVDKLFHLLKEKKLEVVIIPANELPIHADIGWMEQVIINFVVNAIRHAEEGSSITIRIEGSGEVNTFSIENKGETIPDDQLELIWNRFYRAELSRSRQTGGTGLGLSIVKRILDLHEFRYKAENTKDGVRFVVIFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGV7</accession>
    <name>E3EGV7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_05850</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369823.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18815"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55191">
        <property type="protein sequence ID" value="ADO55191"/>
        <property type="gene ID" value="PPSC2_05850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1198"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009583_0_4_9"/>
    <dbReference type="OMA" id="KLPLIWH"/>
    <dbReference type="OrthoDB" id="635734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="42"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="195"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="382" mass="42408" checksum="71B811E8A7AA866F" modified="2011-01-11" version="1">MMRVAYIDHTARWSGGEVALYNILTNIGEHIDPLVILAEEGDLADRLRQRDIDVRIVPLDDSIRNRGRNAVNLGAPAAAFRLLAYGRKLAPLLREEKVVCVHTNSLKSALYGAVAAKSAKLPLIWHIRDHIGPPYLKPIVAKGIRLMSRFLPNGVIANSKSTLSALELPPDKKTLVVYSAFAKAITARDSAAQLRGDDSFNVVLVGRLAEWKGQHILLEAARSFLPDQRVKFWLAGDALFGEEEYKQRLESTMREYGLTNVNLMGHVDDIQGLMQRCDLLIHTSITPEPFGQVIIEGMAAGLPVIASNEGGPKETVVPNETGLLIEPGDPAKLEEAIRWMLEHPQERQQMGERGMERVKKHFVIENTVKDIVHYYKGLLAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGV8</accession>
    <name>E3EGV8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rfaG1</name>
        <name evidence="3" type="ORF">PPSC2_05855</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369824.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18820"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55192">
        <property type="protein sequence ID" value="ADO55192"/>
        <property type="gene ID" value="PPSC2_05855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1199"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041001_0_0_9"/>
    <dbReference type="OMA" id="QLHICYC"/>
    <dbReference type="OrthoDB" id="635734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="14"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="198"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="366" mass="42067" checksum="06FC3738892B4B19" modified="2011-01-11" version="1">MKIAIAHDYLIQMGGAERVVEVFHDMYPEAPIFTTVFSDERLSRNLKDADIRATWLQNIPGVKANFKGVLPLYPIAIRDFDFRDFDIVLSSSSAFMKSIQVPKHTFHICYCHTPMRFAWDYDTYMARQSKSNLLKNMLKLYMNRLKTWDAKTSRNVDQFVANSSVVKRRILHYYQREADVIFPPINTSRFKRATSIGDYYLIVSRLVSYKRIDLAIEAFKRNGLKLRIVGEGPDRKRLEAMAAPNIEFLGRLEDEEVNKLMAECRALVFPGEEDFGITPLEANAAGRPVIAFQGGGALDTIVPHVNGVFFRKHQVDDVLEAVAKVEQHAWNVDDIITHARKFDEDNFKDQLKKYVEQAYVNFLKGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGW5</accession>
    <name>E3EGW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">XRE family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ansR1</name>
        <name evidence="2" type="ORF">PPSC2_05885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369831.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18850"/>
    <dbReference type="EnsemblBacteria" id="ADO55199">
        <property type="protein sequence ID" value="ADO55199"/>
        <property type="gene ID" value="PPSC2_05885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1205"/>
    <dbReference type="eggNOG" id="COG1476">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_4_0_9"/>
    <dbReference type="OMA" id="MNYGTRI"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="14262" checksum="D8E7F66CCEB6B692" modified="2011-01-11" version="1">MNYGTRIAELREHKGLKQEELAQSLGITRAALSHYEKNRRKPDFETLTKLADIFEVTIDYLVGRTSHPTAILDSDVREFVDQLELSDENILQRFNLTIDGRTLSEEEAKRFIAFVRMERMME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGY4</accession>
    <name>E3EGY4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lantibiotic biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bsaB</name>
        <name evidence="3" type="ORF">PPSC2_07495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55544.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599582.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20465"/>
    <dbReference type="EnsemblBacteria" id="ADO55544">
        <property type="protein sequence ID" value="ADO55544"/>
        <property type="gene ID" value="PPSC2_07495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1549"/>
    <dbReference type="eggNOG" id="ENOG502Z81U">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010573_0_0_9"/>
    <dbReference type="OrthoDB" id="1149848at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006827">
        <property type="entry name" value="Lant_deHydtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023809">
        <property type="entry name" value="Thiopep_bacteriocin_synth_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14028">
        <property type="entry name" value="Lant_dehydr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04738">
        <property type="entry name" value="Lant_dehydr_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03891">
        <property type="entry name" value="thiopep_ocin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lant_dehydr_N" evidence="1">
        <location>
            <begin position="71"/>
            <end position="723"/>
        </location>
    </feature>
    <feature type="domain" description="Lant_dehydr_C" evidence="2">
        <location>
            <begin position="806"/>
            <end position="1070"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55544.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1084" mass="125658" checksum="8027052EA732B60E" modified="2015-05-27" version="2">MKRQLHYTDAHNLHREPRDKNERWFSACDYFLIRAPLLPIEQYYKVFSDQDVDSHLSLEEITRRLKLVSQEAVIREAISLASPSLMQFLHYLNDDNASDDKGELQKYEKTLNSFYRYFIRMTTRTTPFGLFSGVGQGICRDATHLDIGTYHQHLKRARPDMEWIYKMIRKMESDPVIFDQLKVFLNRTVMIKGDRAKLPFRPKHGAAEADDSAEMFSSIRLTDVVRLTFEAAEHPIQVMELKELLLKAFPDATMEIIAHFLQQLVEQEFILSELRPPLMDHSPFHYIFEKIKKMDMSDHWTDILHEIDILLRQYNQCTIGEGEKAYRELCGKMLDIIPVKTPVQVDVKLAQEVTLPRHVLNDVALGAEVMCRLFSSPKTDELDDYLNRFLEKYGVYQEVPINELFDEDWGLGIPKMYRTNEKKSMGMEAFKRNAVLFQWLSNAIANHDIEIVLSDEQLEQLTISDNDDTSPESMEVYYSIFAESPEKVDSGDYRLLLGPSAGSNRAGKTFGRFLDMFSDEFVQNFSEIYDHHQCFHPDALLSEMVFMPDQGKISNISLSKNLMGYEIVSGTTSSKDEETTLHMDDLLIGATHDRFYVKSRRLGKEIIPLQTHMLNYKLSPHIFRFLTDITNKELGTWSYFDWGPLEQSPFLPRLVYKKIVISAAQWRLGKTALNISGLTEPQAREYLFHTWREQWNVPRYVYLTMGDNRLLLDLCNLFHVKELLREVSKMREGQELLLTECLGDPFHTPLHGTAGRYMGEFVFPLKKKKIKVKPSIPSSQNHLDSQNFIAHTSSSIHRGILPGGEWIYLKLYGVKERENDLIGLSLSQLQNNPGFEDWSQKSYFLRYVDPEHHIRLRFQGEPSQLWSAGLAQLNQWAVELREEGLITHMVLDTYLPELERYGGQMLMDLAEQVFDVDSRWVIAYMAGIRSKAFNLDIEIAAVINIIHYLSSFGLTIREQVDWLDERIDSKPYMKAFRDVKKALINAVESDYEWIRQADPAAQVALLALVKKRQAMIQQYAQAITLAEKNHELTNHANDILGSIIHMHLNRLLGVNREREMKCMALAKHTAANLLHRKGVHHVTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH40</accession>
    <name>E3EH40_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">zinc_ribbon_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_07740</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370227.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55600">
        <property type="protein sequence ID" value="ADO55600"/>
        <property type="gene ID" value="PPSC2_07740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1606"/>
    <dbReference type="eggNOG" id="COG4640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1174505_0_0_9"/>
    <dbReference type="OMA" id="QISSTWH"/>
    <dbReference type="OrthoDB" id="1925915at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026870">
        <property type="entry name" value="Zinc_ribbon_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13240">
        <property type="entry name" value="zinc_ribbon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="zinc_ribbon_2" evidence="2">
        <location>
            <begin position="4"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="236" mass="26657" checksum="BF64225D6027CE8C" modified="2011-01-11" version="1">MKICPNCSNQLEEESHFCNKCGTNLADSGVPAIKKPRKSKLKKVMFILTTLILIVGLTGGVLIYKDHQHKVALNTYKENVDKAATQIVAYSLASEKVCDLYSDVWRRAIDADYWIEVDGKKAYDFNEAIQYQREALESKNVLSEIEKGTKSVDDLMSKLKNPPTEFQASYEKLVELYGLYTQYADQADSPSGSLIEFNKKTDELSSEIGKEYNQLKTIIPEIKEGSIKGYISQFNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH56</accession>
    <name>E3EH56_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370243.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1640"/>
    <dbReference type="EnsemblBacteria" id="ADO55616">
        <property type="protein sequence ID" value="ADO55616"/>
        <property type="gene ID" value="PPSC2_07795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1621"/>
    <dbReference type="eggNOG" id="ENOG5033ADN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_161873_1_0_9"/>
    <dbReference type="OMA" id="EICNICY"/>
    <dbReference type="OrthoDB" id="1977738at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025983">
        <property type="entry name" value="Cys_rich_CPCC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14206">
        <property type="entry name" value="Cys_rich_CPCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cys_rich_CPCC" evidence="1">
        <location>
            <begin position="5"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9647" checksum="E904E17F0B3929BF" modified="2011-01-11" version="1">MDTKKCPCCGNFTVEEDFDICEVCYWQYDTVAHNNPDIVMGANKISLNMAQKNYKTFGASEERFIDKVRKPVSEELPENNTESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH79</accession>
    <name>E3EH79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug transporter MatE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">norM</name>
        <name evidence="2" type="ORF">PPSC2_08960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370488.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21425"/>
    <dbReference type="EnsemblBacteria" id="ADO55870">
        <property type="protein sequence ID" value="ADO55870"/>
        <property type="gene ID" value="PPSC2_08960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1888"/>
    <dbReference type="eggNOG" id="COG0534">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012893_6_0_9"/>
    <dbReference type="OMA" id="TGNQKVG"/>
    <dbReference type="OrthoDB" id="1415498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006603">
        <property type="entry name" value="DinF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="194"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="244"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="286"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="316"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="351"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="390"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="418"/>
            <end position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="456" mass="50142" checksum="86D52D823873F8A3" modified="2011-01-11" version="1">MQLTLTMGQKWKQLFYILLPILITQLALSAMTFFDTNMSGHFSPADLAGVAIGVSLWVPVQTGLNGILMAITPIVSQLLGAQRKDKVSYYVIQALWLSLALSIVVLIAGIILVKPILNSMNLELRVHNVALYYLCAMAFGVVPLFAYTVLRSFMDALGQTRFTMLITLMSLPINVLLNYLLIYGNWGFPRLGGVGSGVATATTYWIIMLVAGITAHRGKIFAEYRIFSKIYGIAASALKELIKIGVPIGFAIFFETAVFSAVTLFMSSYNTATIAAHQAAMNFASTLYMIPLSICMALTILVGYETGAARPRDAKTYSVMGISSAVGLSLITAIVLLIWGEQVARLYSTDLQVIQLAQHFLIYAIFFQISDAVATPTQGALRGYKDVNPAFLLTFLSYWVIGLPVGYILARWTTWGPYGYWIGLITGLAVGAILLLWRLVRVQHRFAQQKQHAETN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC6</accession>
    <name>E3EHC6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">3-oxoacyl-[acyl-carrier-protein] synthase 2</fullName>
            <ecNumber evidence="3 12">2.3.1.179</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">fabFB</name>
        <name evidence="16" type="ORF">PPSC2_09180</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 12">
            <text>(9Z)-hexadecenoyl-[ACP] + H(+) + malonyl-[ACP] = 3-oxo-(11Z)-octadecenoyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:55040"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10800"/>
            <dbReference type="Rhea" id="RHEA-COMP:14074"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:83989"/>
            <dbReference type="ChEBI" id="CHEBI:138538"/>
            <dbReference type="EC" id="2.3.1.179"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>a fatty acyl-[ACP] + H(+) + malonyl-[ACP] = a 3-oxoacyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:22836"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9916"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78776"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 12">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 12 14">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.179" evidence="3 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370534.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21650"/>
    <dbReference type="EnsemblBacteria" id="ADO55917">
        <property type="protein sequence ID" value="ADO55917"/>
        <property type="gene ID" value="PPSC2_09180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1935"/>
    <dbReference type="eggNOG" id="COG0304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_69_2_9"/>
    <dbReference type="OMA" id="TACSIGN"/>
    <dbReference type="OrthoDB" id="606297at2"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00834">
        <property type="entry name" value="KAS_I_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017568">
        <property type="entry name" value="3-oxoacyl-ACP_synth-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="PTHR11712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000447">
        <property type="entry name" value="KAS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03150">
        <property type="entry name" value="fabF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 12" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8 12" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5 12" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_KS" evidence="15">
        <location>
            <begin position="4"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="active site" evidence="13">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR000447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000447-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM00825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO55917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="412" mass="43590" checksum="21C1C91D21C46F96" modified="2011-01-11" version="1">MQRVVITGMGVVSPLGNEVDTLWNNLLEGHSGIRKINSFDVSDLKAQIAGLVQDFDAEKQWGRKDARRMDRFTQFALYAAEQALKDSGLELDRTDLERVGVYVGSGVGGLDTLVDNVDVLLHRGPGRVSPTLVPMMISNMAAAQISIAFGAMGPTLSPVTACSIGNTAIGEAFRTIRTGDADVIFAGGAEAAVSRLALASFANATALSTRNEEPSTASRPFDKNRDGFVMSEGAGILVLESLEHATRRGAEIYGEVIGYGASSDAYHMVAPHPEGTGAYLAMKAALHSARISPEEVDVISAHATSTAVGDIAETLAIHKLFGDYAYQIPVTANKSMLGHMLGAAGGVEAIALVQSLREGIIPPTMHLDNPDPVCDLDYVPHEARKASLNIGLSNSFGFGGHNAVIVLKRYES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHI3</accession>
    <name>E3EHI3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YmfJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ymfJ</name>
        <name evidence="1" type="ORF">PPSC2_10215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370745.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22685"/>
    <dbReference type="EnsemblBacteria" id="ADO56136">
        <property type="protein sequence ID" value="ADO56136"/>
        <property type="gene ID" value="PPSC2_10215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2152"/>
    <dbReference type="eggNOG" id="ENOG50330BT">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_171794_1_0_9"/>
    <dbReference type="OMA" id="WKKFLGQ"/>
    <dbReference type="OrthoDB" id="2069623at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021637">
        <property type="entry name" value="DUF3243"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024702">
        <property type="entry name" value="Uncharacterised_YmfJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038292">
        <property type="entry name" value="YmfJ/YflH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11588">
        <property type="entry name" value="DUF3243"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004764">
        <property type="entry name" value="YmfJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9529" checksum="9B29DB371C3915B0" modified="2011-01-11" version="1">MSTVVQNFDVWKKFLGQRVEQAEKLGISQDTIAELAYEIGDFLDEKVDPANHSNRALKELWGVADENERHTIARLMVKLAKSNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHN9</accession>
    <name>E3EHN9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yceJ1</name>
        <name evidence="9" type="ORF">PPSC2_10950</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370907.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2329"/>
    <dbReference type="EnsemblBacteria" id="ADO56301">
        <property type="protein sequence ID" value="ADO56301"/>
        <property type="gene ID" value="PPSC2_10950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2318"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_61_5_9"/>
    <dbReference type="OMA" id="TGWTLSM"/>
    <dbReference type="OrthoDB" id="1384345at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="95"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="128"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="156"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="209"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="242"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="269"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="298"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="331"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="360"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="4"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="393" mass="42706" checksum="DADCA1A29591ED4A" modified="2011-01-11" version="1">MIKLTALFFLIMFVIGTDTFLISPLIPTLQSLFHIPTEYSGWMVGSYALGYAIFALIAGPLSDGWDRKKVMLAGMVCFSVSTMLCGFATGFWSMFFFRFLAGVSAAFTAPQVWASIPALFPTSKIAKVSGIVMAGLAASQAFGIPIGSLLASTHWYYPFFTIGACALLVAVFIFYALPEMKPNQGQKTKTPVFSRYIPLLNSRMARKAFLAHFLFQCGFFAAFSFIGKWVTDRFHLSIDQAGYVMFFLGLGNIVGSFGGAYVIKTLNRFNTLVVGFLVSIICFIVLPLLPSVAAFESVYFFIFVNMGIAFPLILGMLNSLNPTIRGTISSLANSIMYAATTLGSWIAGLIYATFNGFSAVGMFAAICFAGSLLSFIFSGILTSHAKTKKELAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHS2</accession>
    <name>E3EHS2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370940.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23485"/>
    <dbReference type="EnsemblBacteria" id="ADO56334">
        <property type="protein sequence ID" value="ADO56334"/>
        <property type="gene ID" value="PPSC2_11095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2351"/>
    <dbReference type="eggNOG" id="ENOG5033TSS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1508536_0_0_9"/>
    <dbReference type="OMA" id="YPLHEET"/>
    <dbReference type="OrthoDB" id="1673572at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="22339" checksum="0B72BC5FBDA67327" modified="2011-01-11" version="1">MTRNLQYVPYGYEPPIETHKGTMVYYDTFEQTTASELELFAETGAALSFTKLVLYPLHEETVRRMWKQPVRSYYKRVDELGEWQREQALSAVVIENWEGKRKKYTPIEATIRFLAEKYATPLFLYMSPETANLCASYASFGEWIRNVRLLLSSEPLELHPKLVQYRNRWNTVKEATNRDSKVDKEEHEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHW0</accession>
    <name>E3EHW0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371057.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2481"/>
    <dbReference type="EnsemblBacteria" id="ADO56452">
        <property type="protein sequence ID" value="ADO56452"/>
        <property type="gene ID" value="PPSC2_11660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2467"/>
    <dbReference type="eggNOG" id="ENOG5032EEW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_203235_0_0_9"/>
    <dbReference type="OMA" id="GSKGWTR"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025175">
        <property type="entry name" value="DUF3934"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13070">
        <property type="entry name" value="DUF3934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="6066" checksum="CF03818841CA8332" modified="2011-01-11" version="1">MGGKSKGGGTGRGTGSKGWTRWNKTAKPVKRKSAATGAPGNTAAGAAKGGAAKPIGNRGGRSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ5</accession>
    <name>E3EHZ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lipW</name>
        <name evidence="2" type="ORF">PPSC2_11820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371092.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24145"/>
    <dbReference type="EnsemblBacteria" id="ADO56487">
        <property type="protein sequence ID" value="ADO56487"/>
        <property type="gene ID" value="PPSC2_11820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2503"/>
    <dbReference type="eggNOG" id="COG0657">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012494_6_1_9"/>
    <dbReference type="OMA" id="DVPHVFQ"/>
    <dbReference type="OrthoDB" id="1361074at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013094">
        <property type="entry name" value="AB_hydrolase_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07859">
        <property type="entry name" value="Abhydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Abhydrolase_3" evidence="1">
        <location>
            <begin position="92"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="37381" checksum="8D0A467195E81FFC" modified="2011-01-11" version="1">MGAQKSRSRHLIDPEIISAVDLIPTTDLTKSTLMESRKNQSQMMQQLDVTQMFPVTLEKRVVPSYFNGPDIQIEIIKPKQSKHNKMPLYYSIHGGGMVLGSPVVDRPANAALAAEHGFCCVSVYYRLAPEHVQPSQLQDCYSGLKWCIEHAEELGIDTEKVAVGGSSAGGGLAAGLALYIRDQKEFEIHHLRLMRPMLDDRTSIAPEHPYAGEFIWTKQSNYFGWKSVLGVEPGSEEVSEYYVPARAKSWAGLPPTYINIGTVDLFIDEALFFAKQLVFDGVLVELHVYPGYHHMSPAFPNAHFSKEGARTSEYALLKALKIFDINCNEYNTKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI16</accession>
    <name>E3EI16_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4179 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12370</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371209.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2636"/>
    <dbReference type="EnsemblBacteria" id="ADO56605">
        <property type="protein sequence ID" value="ADO56605"/>
        <property type="gene ID" value="PPSC2_12370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2624"/>
    <dbReference type="eggNOG" id="COG5662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043524_0_0_9"/>
    <dbReference type="OrthoDB" id="909161at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025436">
        <property type="entry name" value="DUF4179"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13786">
        <property type="entry name" value="DUF4179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4179" evidence="2">
        <location>
            <begin position="51"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="391" mass="44524" checksum="A76532899CABD101" modified="2011-01-11" version="1">MNYHDPVDPILKQFLKSRAQDLVIPNTVENAVGYALSSLSDQNMKKRSFLKRWRWAAAAVAFFFVLGAVSILTVPTFAEVFRSLFAKDNPDIGLMRAQELGLVIHPHIKVKDKGYTLVINEAVADPTRVTIALQLFDENGKHDRHKLAIGEANKITIKDDKGNVVGSMHDMGYTSDFYYMVDFFSDPLKTDKITIEGSIGTLGQRNETLIKGNWNFSFDIDMKEANKQNNIEELAGSYTTPHGMAITLKRLTRMVQGVRFELERELDDAAMTRSSGDLWKKQMLSFHFETTGGQEIHSVNPRKKNYRDSLMTSDRRVIGNGKMHWSYTFKYLPEDKPYRFVLDAYSVAEMDGNKISFRPSELTKPKTFKIMNDRLELVRASLEKSQVNKGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI20</accession>
    <name>E3EI20_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ring-cleaving dioxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydfO3</name>
        <name evidence="2" type="ORF">PPSC2_03565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369324.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16375"/>
    <dbReference type="EnsemblBacteria" id="ADO54688">
        <property type="protein sequence ID" value="ADO54688"/>
        <property type="gene ID" value="PPSC2_03565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.698"/>
    <dbReference type="eggNOG" id="COG0346">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057821_0_0_9"/>
    <dbReference type="OMA" id="YWENRLH"/>
    <dbReference type="OrthoDB" id="1335734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="7"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="152"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="35228" checksum="61AD6F4AC29F2681" modified="2011-01-11" version="1">MSLKTAGIHHITSFAGDPQGNVDFYAGVLGLRLIKKTINFDAPEVYHLYFGNEEGNPGTIITFFPAPGTRKGKIGGGQVGITTYVVPLGSLDYWENRLHSLKVSFTKATRFGESFIQFRDNEGLHLELVEREEGPVNTWTAGGVPTDKAIKGFGGAVLYSADSKHTQGVLENVLGMTPIGEDADAGYIRYQTTGDLGNLIDIPVKDVPWGNGGAGTVHHIAWRAQDDTEHQAWNEWVRQHGFGTSGIVDRQYFNAVYFREQGGILFEIATDPPGFTVDEELNELGHKLMLPEWYEPQRAQIESNLVPIEPRVLKQDESV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI63</accession>
    <name>E3EI63_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">DSBA oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">yusP</name>
        <name evidence="11" type="ORF">PPSC2_03765</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. EmrB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369367.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16580"/>
    <dbReference type="EnsemblBacteria" id="ADO54731">
        <property type="protein sequence ID" value="ADO54731"/>
        <property type="gene ID" value="PPSC2_03765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.741"/>
    <dbReference type="eggNOG" id="COG0477">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_2_5_9"/>
    <dbReference type="OMA" id="TALFMEN"/>
    <dbReference type="OrthoDB" id="1558246at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004638">
        <property type="entry name" value="EmrB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00711">
        <property type="entry name" value="efflux_EmrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="71"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="96"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="133"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="159"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="191"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="223"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="261"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="296"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="325"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="349"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="463"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="10">
        <location>
            <begin position="6"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="485"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="486"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="504" mass="54053" checksum="5400BF268723B06D" modified="2011-01-11" version="1">MKRGLVLTGVLLATFLAAIEGTVIGPAGPTIVSELGSVSLLSWIFTAYLLTMAVTTPIFGKLSDLFGRKPIFLIGCSLFVVGSLLCMLAGSMEQLILYRAIQGIGAGGVIPVTFTIIGDIYKMEERGKVQGMISSVWGISSLVGPLLGGYVVTYFGWEWIFGFNVPFGFLAMFFIARYLREQVSKRTARIDVAGAVTFTIGMTALLLVLALGGQYIDWASPELLALAAVAILFLVLFLVIEKRAQEPMVPLKLFRIRDIAFSCAAALLVSTLLIGLTSYLPLWIQGVHGGDAASSGLALAPMSVGWLFGSMIGGRILLTLGSRRTSLIGLTLIVLGAFVMTLMDQTAPIWLLFLSTLLYGLGFGFSMTVFTIIAQSSVGFQLRGASTALNTFLRTLGQTIGVAAFGSWLNYRIAAQTADGQLTQQGVTQEDINGLLAPHASQSLSDKVAGLLRSVLENSLHSLFVIMVVIAVISWFVVLGLRNRPPGTEEEADQRIKAPQREHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI68</accession>
    <name>E3EI68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykoM1</name>
        <name evidence="2" type="ORF">PPSC2_03780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369372.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54736">
        <property type="protein sequence ID" value="ADO54736"/>
        <property type="gene ID" value="PPSC2_03780"/>
    </dbReference>
    <dbReference type="GeneID" id="66574219"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.745"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_2_9"/>
    <dbReference type="OMA" id="WEFDVLT"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="17591" checksum="BB42B7FB52439FAC" modified="2011-01-11" version="1">MIDYRTLVTQQSMHLYSVFAKSFKSVNEHAVAGIKTVGFNPTAFAVMEVLYHKGAQPIQQIGAKLLLQSGNVTYVIDKLESRGYLHRHPCDQDRRIIYAELTDEGQRVMDEIYPDYTRQIERAFSGISETERDQLIGLLKKLGRSADNLSPYHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIH0</accession>
    <name>E3EIH0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369914.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55283">
        <property type="protein sequence ID" value="ADO55283"/>
        <property type="gene ID" value="PPSC2_06265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1292"/>
    <dbReference type="eggNOG" id="ENOG5032FC9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2288767_0_0_9"/>
    <dbReference type="OrthoDB" id="2009175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="12284" checksum="1059D23205B90951" modified="2011-01-11" version="1">MDMKDQMKTEKEQNGQATKKGMTLENVWFASKEHGLYPYHINHDLRQSDYFYNKNYTQFHEHDFQSIVLRVSEEPKAFYLTEYDKKYYSTQELEVIEKISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIM9</accession>
    <name>E3EIM9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cysteine desulfurase</fullName>
            <ecNumber evidence="4">2.8.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">csd</name>
        <name evidence="6" type="ORF">PPSC2_07990</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[sulfur carrier]-H + L-cysteine = [sulfur carrier]-SH + L-alanine</text>
            <dbReference type="Rhea" id="RHEA:43892"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="EC" id="2.8.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.7" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370292.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20685"/>
    <dbReference type="EnsemblBacteria" id="ADO55667">
        <property type="protein sequence ID" value="ADO55667"/>
        <property type="gene ID" value="PPSC2_07990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1680"/>
    <dbReference type="eggNOG" id="COG0520">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003433_2_5_9"/>
    <dbReference type="OMA" id="HKLCGPT"/>
    <dbReference type="OrthoDB" id="446447at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006534">
        <property type="term" value="P:cysteine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06453">
        <property type="entry name" value="SufS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010970">
        <property type="entry name" value="Cys_dSase_SufS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016454">
        <property type="entry name" value="Cysteine_dSase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005572">
        <property type="entry name" value="NifS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01979">
        <property type="entry name" value="sufS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_5" evidence="5">
        <location>
            <begin position="23"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="44515" checksum="15E539CA4A757A7B" modified="2011-01-11" version="1">MNTALIREQFPILHQEINGHPLVYLDNAATSQKPLAVIEAIKHYYEFDNSNVHRGVHTLGSRATDAYEGAREKVARFLNAKRSQEIIFTRGTTTALNLVASSYGRANCKEGDEIVITQMEHHSNLIPWQQVAKATGATLKYIPLQEDGSVDLADVEKTVTENTKIVAIAHVSNVLGVVNPVKEIAAIAHRKGAVIVVDGAQSTPHMKVDVQDIDADFYAFSGHKMCAPTGIGALYGKKALLENMEPIEFGGEMIDDVGLYESTWKELPWKFEGGTPIIAGAVGLGAAIDFLESIGLDAIAQHESRLSNYALKRLREVDGLKIYGPAERHVGLVTFNLDDVHPHDVATVLDSKGVAIRAGHHCCQPLMRWLKASATARASFYLYNTEEDIDALVSALIQTKEYFGDAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIQ5</accession>
    <name>E3EIQ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">frlR3</name>
        <name evidence="2" type="ORF">PPSC2_08125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370316.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1719"/>
    <dbReference type="EnsemblBacteria" id="ADO55693">
        <property type="protein sequence ID" value="ADO55693"/>
        <property type="gene ID" value="PPSC2_08125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1709"/>
    <dbReference type="eggNOG" id="COG2188">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063236_4_2_9"/>
    <dbReference type="OMA" id="VAFMRTW"/>
    <dbReference type="OrthoDB" id="1775418at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="236" mass="26552" checksum="86CAF5AEB5444C2E" modified="2011-01-11" version="1">MIDHSESSPLYRQLQEKILDSIHNGTLKPGDKLPTELELSETNNVSRVTVRAALDSLTSEGYLVRIPGKGTFITKDKIKKNVVETIGFSDTCKLQNKVPGAKVIKCVIEDATASDQEHLGLMPGDKVINIERIRYADNVPVSVEYSRFPSSFSFLLQEDLNNISLYDILKNKHKITFGISRKYIVMEFASFDVATYLNIEEGYPLLCIKSTVCNPDGQKIHRSKQLILGDRFELIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIX6</accession>
    <name>E3EIX6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">1,2-propanediol oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">adh1</name>
        <name evidence="3" type="ORF">PPSC2_09550</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370612.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22020"/>
    <dbReference type="EnsemblBacteria" id="ADO55995">
        <property type="protein sequence ID" value="ADO55995"/>
        <property type="gene ID" value="PPSC2_09550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2013"/>
    <dbReference type="eggNOG" id="COG1454">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007207_0_0_9"/>
    <dbReference type="OMA" id="IRFGPGC"/>
    <dbReference type="OrthoDB" id="1456634at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039697">
        <property type="entry name" value="Alcohol_dehydrogenase_Fe"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11496">
        <property type="entry name" value="PTHR11496"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00913">
        <property type="entry name" value="ADH_IRON_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00060">
        <property type="entry name" value="ADH_IRON_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-ADH" evidence="2">
        <location>
            <begin position="9"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="41145" checksum="298C7D901684ED3D" modified="2011-01-11" version="1">MSAHVFFVPSINLMGKGCLHEVGPYIKELHLHKALVVTDKFLMKSGIAGKVTSLLDDIGLDYAVYDEVKPNPTCKNVHDGVQFLQENGCDFLISIGGGSPQDTAKGIGIIATNGGHITEYEGVHQSKHKSLPIVAINTTAGTSAEITINYVITDEERKVKMVMVDKNSVATISVNDPELMVDKPAALTAATGLDALTHAIEALVTPGSYPVTNATALAAVELIFNNLARTVSNGHDIEAREQMVFAIFLGGLAFNNAGLGYVHAMAHQLGGVYDLSHGVCNAMLLPIVEEENAKHVPEKFRAIAKVIGFEDKGKTDKECADYVIQRIKDLSKEVGIPAKLSELGVNEVDLDLLAENSMKDACAPGNPFIPSKEQVIEMFKKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIY0</accession>
    <name>E3EIY0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidase M56</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_09570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370616.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55999">
        <property type="protein sequence ID" value="ADO55999"/>
        <property type="gene ID" value="PPSC2_09570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2017"/>
    <dbReference type="eggNOG" id="ENOG50306WZ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1546133_0_0_9"/>
    <dbReference type="OrthoDB" id="2114523at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="19991" checksum="26E72D6A655D6E5D" modified="2011-01-11" version="1">MLKLIPKKSFIICIVILIALMAYFTKNLRTEMSVKSTDLSELSINNIPLSKNIAEIDLTAYKKNPDFNDKHTKDADHRYFENFLIVYSSSGEIMKLQTLSESEFSSISGHKLQKLEDVKNKLGNHFVNQSYDSAQSLNAIVYYDKINRTKASFVYPHNNKQDQIVVWTILEKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ65</accession>
    <name>E3EJ65_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">FMN dependent NADH:quinone oxidoreductase</fullName>
            <ecNumber evidence="6">1.6.5.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Azo-dye reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">FMN-dependent NADH-azo compound oxidoreductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">FMN-dependent NADH-azoreductase</fullName>
            <ecNumber evidence="6">1.7.1.17</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">azoR</name>
        <name evidence="8" type="synonym">yocJ</name>
        <name evidence="8" type="ORF">PPSC2_10680</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.</text>
    </comment>
    <comment type="function">
        <text evidence="6">Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2 a quinone + H(+) + NADH = 2 a 1,4-benzosemiquinone + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:65952"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="ChEBI" id="CHEBI:134225"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>anthranilate + N,N-dimethyl-1,4-phenylenediamine + 2 NAD(+) = 2-(4-dimethylaminophenyl)diazenylbenzoate + 2 H(+) + 2 NADH</text>
            <dbReference type="Rhea" id="RHEA:55872"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15783"/>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:71579"/>
            <dbReference type="EC" id="1.7.1.17"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="5">
            <dbReference type="Rhea" id="RHEA:55874"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="6">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the azoreductase type 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.-" evidence="6"/>
    <dbReference type="EC" id="1.7.1.17" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370852.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23075"/>
    <dbReference type="EnsemblBacteria" id="ADO56246">
        <property type="protein sequence ID" value="ADO56246"/>
        <property type="gene ID" value="PPSC2_10680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2262"/>
    <dbReference type="eggNOG" id="COG1182">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_088964_3_1_9"/>
    <dbReference type="OMA" id="HASGWLR"/>
    <dbReference type="OrthoDB" id="1402654at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016652">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016655">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01216">
        <property type="entry name" value="Azoreductase_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023048">
        <property type="entry name" value="NADH:quinone_OxRdtase_FMN_depd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2 6" id="KW-0288">FMN</keyword>
    <keyword evidence="4 6" id="KW-0520">NAD</keyword>
    <keyword evidence="3 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="7">
        <location>
            <begin position="3"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="22700" checksum="2E6FB1525B85D47F" modified="2011-01-11" version="1">MSKVLFVKANDRTAEESATVKLYNAFVESYKSSHPSDEITELDLFSVELPYLNANMINGTFKSARGMELNTEEARLANIANGYLDQFLAADKVVFAFPLWNMTIPAVLHTYIDYLNQAGKTFKYTAEGPVGLVTDTKVALLNARGGVYSEGPAAAAEMSLNFMSNILTFFGVKDIVKVVLEGHNQAPDQAQEIVASAVQRAVDAAKSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ71</accession>
    <name>E3EJ71_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YqiX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yqiX</name>
        <name evidence="1" type="ORF">PPSC2_11210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370963.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23595"/>
    <dbReference type="EnsemblBacteria" id="ADO56358">
        <property type="protein sequence ID" value="ADO56358"/>
        <property type="gene ID" value="PPSC2_11210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2373"/>
    <dbReference type="eggNOG" id="ENOG50336W6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_131538_2_0_9"/>
    <dbReference type="OMA" id="MFLPEHK"/>
    <dbReference type="OrthoDB" id="1702505at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014962">
        <property type="entry name" value="YolD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08863">
        <property type="entry name" value="YolD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="111" mass="13018" checksum="DCB6E5A377B98364" modified="2011-01-11" version="1">MGKKLEGNGIWESSRMILPEHREAYLRLMKEQGRRGKPTLDDQEIQQIEQAIIVSYNERKPITLRVFNPFDDEELCGLVTVINTSRREVKLSRGEEDFSWIKLEEIIEADI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ90</accession>
    <name>E3EJ90_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YvbY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvbY</name>
        <name evidence="2" type="ORF">PPSC2_11310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370982.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23665"/>
    <dbReference type="EnsemblBacteria" id="ADO56377">
        <property type="protein sequence ID" value="ADO56377"/>
        <property type="gene ID" value="PPSC2_11310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2393"/>
    <dbReference type="eggNOG" id="COG1556">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090664_1_0_9"/>
    <dbReference type="OMA" id="CDAFIDY"/>
    <dbReference type="OrthoDB" id="1580190at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024185">
        <property type="entry name" value="FTHF_cligase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003741">
        <property type="entry name" value="LUD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02589">
        <property type="entry name" value="LUD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LUD_dom" evidence="1">
        <location>
            <begin position="72"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="27930" checksum="692A9E6D3AD90B5E" modified="2011-01-11" version="1">MNEQRNPSAQAKAEHEAWLHQMLSESRVKQARFMEGIAARLKRPRQTEPPMQPFRGAPAFWHEFEWSAEQRIEEFTANFTSVGGHVVRLPDLKETADWIAHKARELGAVYIVRQNEPDLEALQLEAALPEVRLSVWNTDPAEDWKARAAEADIGMVIADEAAAYTGSVAVLSSPEKGRSVSLLPTVLIILLPVERLRTRLGEILSRFDEAGREQLPAGIHFITGPSRSSDIENDLTIGVHGPGIVYTLLIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ92</accession>
    <name>E3EJ92_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">DeoR faimly transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">walR1</name>
        <name evidence="8" type="ORF">PPSC2_11320</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370984.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23675"/>
    <dbReference type="EnsemblBacteria" id="ADO56379">
        <property type="protein sequence ID" value="ADO56379"/>
        <property type="gene ID" value="PPSC2_11320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2395"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OMA" id="FIINVRG"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="5"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="132"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="132"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="27048" checksum="58A5B727E35185B3" modified="2011-01-11" version="1">MHNGTILLVDDEPEIIKLMQIYLENEGYRLLMARDGLEALEQVNREQIDVMVLDVMMPNMDGIEACMKIRETEHFPIIMLSAKGQDMDKITGLSVGADDYVTKPFSPLELVARIKSQLRRVRKYTHSSSVLEHEMVLDELSINTVTHEVTLAGESVKLTPREFAIVELLARHRGQVLSMEQIYEKVWKEQYLESNNTLMVHVRKIREKIETDPRKPKYLKTVWGIGYKMEKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJL2</accession>
    <name>E3EJL2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GH115_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371166.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24545"/>
    <dbReference type="CAZy" id="GH115">
        <property type="family name" value="Glycoside Hydrolase Family 115"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56562">
        <property type="protein sequence ID" value="ADO56562"/>
        <property type="gene ID" value="PPSC2_12190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2577"/>
    <dbReference type="eggNOG" id="ENOG502Z7KK">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004852_0_0_9"/>
    <dbReference type="OMA" id="PWYWFAD"/>
    <dbReference type="OrthoDB" id="166825at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.379.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031924">
        <property type="entry name" value="GH115"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041437">
        <property type="entry name" value="GH115_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042301">
        <property type="entry name" value="GH115_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029018">
        <property type="entry name" value="Hex-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17829">
        <property type="entry name" value="GH115_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15979">
        <property type="entry name" value="Glyco_hydro_115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55545">
        <property type="entry name" value="SSF55545"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GH115_C" evidence="2">
        <location>
            <begin position="769"/>
            <end position="940"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1215" mass="138607" checksum="DE5E6362BD2BA2D1" modified="2011-01-11" version="1">MKSHQGTQNEFELLKRNHTVPVFVSETENSAVHFAFCNLMRDIDWVCGCKLLRAKEMDQSSIVIGTITDNEPLLAYLQEKGVSLKKLALEDGSYRWEAFLQEVIDGVLYIIGTDRRGTIFGIYDLCEAMGVSPWYYWADVPVKTYDVLCLPLDYSKVDWPAVQYRGIFLNDEEELDDWAKIHTQDGTIGPAAYQSIFELLLRLKANFIWPAMHVNYFNENPENGALAEKMGIVVGTSHCDMLLRSNQNEWEPWLAAKGYDDASYDYSIEGRNREILQEYWRESVEKNKNYEVCYTVGMRGIHDSGFYTQAIDEDNSMTKEERAEAKCSLLGKVIQDQKQILKDVIGESKKNASLQTFIPYKEVLELYDRGLDIPEGVTLIWANDNFGHMRRYPNEKERQRSGGNGLYYHNSYWAAPGTGMSYLFINSIPLAHTENELKKSYESGIRKLWILNVGGLKPLEQDMEFFLRSGWEAGKEEGMTKNASQFVESWINANFSGNHGPEVAELYETFAQVTNVRKIEHMQSNVFSQTVLGDEAGRRLMRLEDIFRRGNAIMYSLPVQERAAFFQMFLMKIHASYYTNHEFYFADRSTLSYERGNMQAADRYVELSIKMADYKRRMLHFYNAKMSEGKWNGILTPESFPPPPTALYPARKPALKIAQGGMRIDLWNEETTLRFSIHGQKQKWFEIGNQGNGTIPFTIEVMEGEDWIILSESEGLIQTEKRILVSIIDPHQHAGKTGQLTVRNHKDMTSVPIKVQVEEGVNVPETFYGHIEADGYVSIPAASYDHNVPGADSTDKSGWVVIPGMGRYEGAAMMAWNGELRPLGGELKNHPYLGYDIFLKEAGQFTLEIHRFLTLNSTGNIRFGIGVDDIAPILVESETRDEWLGTWQESVFNNGEKIRVELPYLASGIHALRIYMVDPYVTINKLVIYTNEQKTCNLGPIASQHHHKLVTDHGLESPTVNWNEVEQLCNQFYETGEHEVPLPVVLYATRDFYATIDEIFLKCFDVPQTTLGDKRYVDICDADGTKDVIKEFGAGMFIESNSIVAIEAEYALEDSENAYLTSSKDGNAIDWSHVQAETNGRTGFAMHVSEPGRQWENPEIAPAMHYKINITNSGNYHIWILVRHHNGQSDSCYLSLDGVVRPLSEQLGQGTLHTYNTAQVYYWCLLSDLELTRGDHLFSILARKSQLRVDRIYMTQGNELPPVDALWTDSIRKQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJY5</accession>
    <name>E3EJY5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386418.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0615"/>
    <dbReference type="EnsemblBacteria" id="ADO60004">
        <property type="protein sequence ID" value="ADO60004"/>
        <property type="gene ID" value="PPSC2_28165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5971"/>
    <dbReference type="HOGENOM" id="CLU_1650469_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="18729" checksum="8BD745D37C7CA8F2" modified="2011-01-11" version="1">MKKKLVVVIATEAEAKRKEQGLSSEETIKWFVEQMKDKKISVDGWFTMDDELRKISGHADWFWIIRTVRNNLDKYTWKIEHSVQKPKLHVTKQSENHWLVWGVLKGETRSAEIISFNECGFHGSKKRYRVDVEGSTKESLIEHFQTAKAIAMFEVKKAFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKA0</accession>
    <name>E3EKA0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385841.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0033"/>
    <dbReference type="EnsemblBacteria" id="ADO59427">
        <property type="protein sequence ID" value="ADO59427"/>
        <property type="gene ID" value="PPSC2_27925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5917"/>
    <dbReference type="eggNOG" id="COG4548">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_371233_0_0_9"/>
    <dbReference type="OrthoDB" id="410590at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="256"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="261"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="289"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="335"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="353"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="700" mass="79038" checksum="7CB342FAF28240B3" modified="2011-01-11" version="1">MEHNNSITKKDMDRVRNFFNRENILKQLKAMVSFLIPNRSNVELNLNIGGGSFTDGESITVGLPEMFIQSPLEEIFIVLQALTGHESQHINSSDFKAYILYQKEVENLFVKKNKDLNEDILRNYVNKIAVAFGNGVEDGRIEKILGNKYPGYVGYLKFLNLSVWKKSEIKGDSELKDLLTTIVTFAVTGLEPRGFEEVYTGSELEKNYIQIKPMIIEGINAVNARLCLSLCKKMIASIESYLMKLLEERTSADEKFLETLPTQPGYTTSSERDFNTGGSTSIHLKPETKPEQVSNKEGCDSNPRKESDGESGKEAAEGGTDTTSKKKKSSSADKEGESSLQSGSSKEQSEMDSKPGQVSKDDKPLEDEPKQNDEELVAQAIDNIFKELEEDIKTKLGDDSRKLLKSKKGKANEDSQLDKDEISQIESRYRKDVANKFHEKRGFPLGIGLHENIRRGGRKFRKEVEAIFRNKESYTLRGQKRGVLDPSHLYKVGTKDYNVFVKRGIPITADYVAYLLWDGSGSMNSDDKQMHSGYAMSVAEEGLKGIIPFKAAQFSVDAKSYVTHYVVKDFNQTKMSDNYTYNFLHHRCACGGNKDGFSIRIATAELMKRPEKDRILFIFSDGIPSDYKGGYKQGMLDVREAVKEARDKGIFVISLLFGTQSFRNDNIENYKYMYSKNIISCEPSQITNQLIRSLKKVISH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKE7</accession>
    <name>E3EKE7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385888.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0080"/>
    <dbReference type="EnsemblBacteria" id="ADO59474">
        <property type="protein sequence ID" value="ADO59474"/>
        <property type="gene ID" value="PPSC2_27700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5869"/>
    <dbReference type="eggNOG" id="COG0497">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_110610_0_0_9"/>
    <dbReference type="OMA" id="AEFYVIS"/>
    <dbReference type="OrthoDB" id="1246155at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="20"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="215" mass="24325" checksum="76EA7FE78B7171ED" modified="2011-01-11" version="1">MLISEAKGRLDDLKSIFYKESALLQQLQKSKEDKEKSQKKLLKQRENVELKKVLIVEAAEEARTQARDVLQEMGTNALRFIMGDHMSLEIELKEQARQWVANFVTKIAESETYEIETDPAEEEGGGVADIVAISIHTSMLQLIGDKNSAPMLLDEPSKYVSKGYSEQVAKFLLEVSSSFNRQVIMVTHDEYLANIGDVAYHFKKRGGRTVTTKIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKF7</accession>
    <name>E3EKF7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386203.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0399"/>
    <dbReference type="EnsemblBacteria" id="ADO59789">
        <property type="protein sequence ID" value="ADO59789"/>
        <property type="gene ID" value="PPSC2_26215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5520"/>
    <dbReference type="HOGENOM" id="CLU_2106571_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="14162" checksum="2F7831626F60EBEC" modified="2011-01-11" version="1">MVKDMTDQQLNRWLAEYMGYTISEYKNKWGWLMCPNGDNVHESLFPLDELWGFVPDYCTDPAASLEVQAAAVAENYEEYVYNLNGVIYKEYECMTFKVISAMLTATPRQRAEAAYMTLSIRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKG3</accession>
    <name>E3EKG3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386209.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59795">
        <property type="protein sequence ID" value="ADO59795"/>
        <property type="gene ID" value="PPSC2_26185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5514"/>
    <dbReference type="HOGENOM" id="CLU_517625_0_0_9"/>
    <dbReference type="OrthoDB" id="2094589at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025119">
        <property type="entry name" value="DUF4046"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13255">
        <property type="entry name" value="DUF4046"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="15"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="108"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="201"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="297"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="406"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4046" evidence="1">
        <location>
            <begin position="499"/>
            <end position="585"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="596" mass="70456" checksum="1977DA7DF21A5967" modified="2011-01-11" version="1">MEAGTISSFKEDQDIINVHDRLIDGKIARLPRNFWGNNEVAEHRLKLCLRHVVLQKLNMEPEEILSEVTQTFLINYKLFNAVYKCQSKRLQEFLIDTFPEIEYGDKEIINIYDAAIEGKIERFPKSFWGEGKVFQRRLKLCLRYVVLQKLEIAPQEILLKVTTTFLIKYKLFNVIYQRQTKGLTDLLMDMFPEIRYTDEEIINIYDAAIEGKIARLPKGFWGNHEDDIQYRLKLCLRYVVLQKLKMQPQEILIKVQSPFLVKYKLDYVIYQRQSKGLQELLIDIFPEIGYKEKDEEILNVYDATIEGKLAKLPKGFWGSHEEEVQHRLKLCLRYVVLQKLKIAPQEILLEVTSPFLMKYKLFNGVYQHQSKGLRDLLINIFPEIEHGDGHNINNILSEKQSTDEEIINMYDAALAGKLAQMPPGFWGNHEGEVQHRLKLCLRYVVLQKLNMKPHEIHMRVQKKFLIQYKLYYAHQRQPKGIKELLIDVFPEIGYTDKDIINIYDAVIEGNARLPRDFWGDEEVVQHRFKLCFRYLVLQKLKIKPQEILSKVTPSFLMKYKLSYIMYKRQTKGLEELLTDTFPEIDNRKGSLVNDRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKG5</accession>
    <name>E3EKG5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386211.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0407"/>
    <dbReference type="EnsemblBacteria" id="ADO59797">
        <property type="protein sequence ID" value="ADO59797"/>
        <property type="gene ID" value="PPSC2_26175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5512"/>
    <dbReference type="HOGENOM" id="CLU_1516479_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="177" mass="19936" checksum="B80E1A180E5A9A9A" modified="2011-01-11" version="1">MDTEFIINSNLLIHLDQLPKPSDLFQNKTYVHGLFAYSNNLERNAQLILDYVNNPVGEMQICCTGNGLYIGDIGLYITGCVHFVSSRDISTGKDSSNRRYTDRHTLSLAKSVTEPNDYIDEAILTPKTVQGIWYNANSDEFVTFANSLSKEHNLPLKALDLIGQQYEGDKTKVIKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKG6</accession>
    <name>E3EKG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386212.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0408"/>
    <dbReference type="EnsemblBacteria" id="ADO59798">
        <property type="protein sequence ID" value="ADO59798"/>
        <property type="gene ID" value="PPSC2_26170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5511"/>
    <dbReference type="HOGENOM" id="CLU_1494849_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="19990" checksum="47E9449F7828532A" modified="2011-01-11" version="1">MNQKEKCFLQVGDVFVVKEGMKVNAEVPSKFIFSNCRMPNTTRKTKIVIGSLLKNKMDVEATAHELKKKIVDSIASVCGAVANPMAVQHLVSSVINSYEEETLDTTIFCGEYLVVNTTFDGGCGGHDPYPNGHHVFCRKLKDGKYDPNGSQIDFYQSGSFTALITPESVQPIRKMTMRFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL38</accession>
    <name>E3EL38_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59600.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0207"/>
    <dbReference type="EnsemblBacteria" id="ADO59600">
        <property type="protein sequence ID" value="ADO59600"/>
        <property type="gene ID" value="PPSC2_27130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5738"/>
    <dbReference type="HOGENOM" id="CLU_1676140_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59600.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="17800" checksum="6E6CE9EA9146ED25" modified="2015-05-27" version="2">MIVYFVAILLIFGVVYGGVPYLQGISPSNQGINKQVHVIHGIYNADVKPLKIGKYTSMSIENLNKNERNFVNTVKRDRGVFQKNDLVILSIGKQSTDQKISFVRQDIRTNEVRIYVKVEEKHNPTQKSYIPYLLGKISIPASIPLSFIDQDTGNLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELE0</accession>
    <name>E3ELE0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386386.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59972">
        <property type="protein sequence ID" value="ADO59972"/>
        <property type="gene ID" value="PPSC2_28320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6007"/>
    <dbReference type="HOGENOM" id="CLU_1293287_0_0_9"/>
    <dbReference type="OrthoDB" id="245027at1239"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="27111" checksum="32F2D8C11356A0A0" modified="2011-01-11" version="1">MINLDASEINAAFHMRLTEMDPMKHVNEAYKIVKNTVFNIDVIVKWRRILKRLIEQEKLKLSNGSVPAGLHPMIAGFPTGFFAYLFDPKKFKSYLQDNSIQPIKLKTRTLLKYVDQQQLDPLHQFEEYDKHAPVIVLESNLFNQPFCISGNLKIVESYKANKGNMSVYYLFPMDYLHLMYDPLSMAMHMFHLDLQQLTEQVIPPKFEELYLNNMDNYLIDERQSLSDEGIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBK5</accession>
    <name>A0A0D5ZBK5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YabO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yabO</name>
        <name evidence="2" type="ORF">PPSC2_00240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599342.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13255"/>
    <dbReference type="EnsemblBacteria" id="AKA44170">
        <property type="protein sequence ID" value="AKA44170"/>
        <property type="gene ID" value="PPSC2_00240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.47"/>
    <dbReference type="eggNOG" id="COG1188">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_101003_4_0_9"/>
    <dbReference type="OrthoDB" id="2006597at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025490">
        <property type="entry name" value="RNAbp_HP1423"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038881">
        <property type="entry name" value="RNAbp_HP1423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10400" checksum="2B5DFF3846501104" modified="2015-05-27" version="1">MRLDKFLKVSRLIKRRTVAKDVSEQGRVVVNGREAKPSSAVKVGDEITVQFGQKLVTVRVERLADTTRKDEAASMYTLVKEEPIARDNGLNW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC44</accession>
    <name>A0A0D5ZC44_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44213">
        <property type="protein sequence ID" value="AKA44213"/>
        <property type="gene ID" value="PPSC2_08065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1697"/>
    <dbReference type="HOGENOM" id="CLU_2288772_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11749" checksum="0FE336F846047F17" modified="2015-05-27" version="1">MCDKTAIKGEVMHRCILNLLHLILLINYETLVMSIIIKNMKVYSVTGVYVRISTEEQTCKIIWKDHSLKLLTNDDVTKYLIMIFRQFLRDILSKTIMATGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCM7</accession>
    <name>A0A0D5ZCM7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324672.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4274"/>
    <dbReference type="EnsemblBacteria" id="AKA44302">
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        <property type="gene ID" value="PPSC2_19995"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="14188" checksum="3E35B64FD5B27799" modified="2015-05-27" version="1">MEKSQLTLVEQYRKKLYRIAWRIQYRARVQTNHEFVMEKNETVIAPSFTEFANSNMYTLQLINSLSSEIGKMIIFDLYILDKTEAQIAKELKLSQQAVNKWKKKMLKELFRMLSSSNGSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E475</accession>
    <name>E3E475_PAEPS</name>
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        <submittedName>
            <fullName evidence="9">Galactoside permease</fullName>
        </submittedName>
    </protein>
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        <name evidence="9" type="ORF">PPSC2_12420</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
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            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
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            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO56615">
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        <property type="gene ID" value="PPSC2_12420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2634"/>
    <dbReference type="eggNOG" id="COG2223">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055585_0_0_9"/>
    <dbReference type="OMA" id="KNFWIFG"/>
    <dbReference type="OrthoDB" id="791272at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005351">
        <property type="term" value="F:carbohydrate:proton symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000576">
        <property type="entry name" value="LacY/RafB_perm_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01306">
        <property type="entry name" value="LacY_symp"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="LACYSMPORT"/>
    </dbReference>
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        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="2A0105"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
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        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="75"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="100"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="144"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
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            <end position="232"/>
        </location>
    </feature>
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            <end position="272"/>
        </location>
    </feature>
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        <location>
            <begin position="284"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
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        </location>
    </feature>
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            <begin position="342"/>
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        </location>
    </feature>
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        </location>
    </feature>
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            <begin position="7"/>
            <end position="397"/>
        </location>
    </feature>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="46266" checksum="6DF71FACFB96DA2F" modified="2011-01-11" version="1">MRKSKSMYWKLSAYFFFFFFTWSASYSLFSIWLGQEISLNGAETGVIFTVNAIFALCMQPLYGYISDKIGLKKHILFLISSLLLFVGPFYIFIYGPLLQYNVFLGAIVGGLYLGIAFLAGIGAIESYVEKVSRKYDFEYGKSRMWGSLGWAAATFFAGQLFNINPNINFWIASVSAVVLFIIMMTIKVEMTDSEMERTESVNFKQIGHLFANKHLWFFILYVLGVTCIYNVYDQQFPNYFSSTFSTVALGNQVYGYLNSLQVFLEAGMMFLAPFIVNKIGAKKGLILAGFLMAFRIMGSGLVIGPYGISAMKLIHALELPIMLIAVFKYLAANFDTRLSSILYLVGYQFTSQVGASIFSPIAGMSYDIRGFANTYVIMGVFVFAFTTISIFTLKKEPKKLEPKPNKHIKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4E0</accession>
    <name>E3E4E0_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
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        <name evidence="3" type="primary">ybfA3</name>
        <name evidence="3" type="ORF">PPSC2_12710</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2713"/>
    <dbReference type="EnsemblBacteria" id="ADO56680">
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        <property type="gene ID" value="PPSC2_12710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2703"/>
    <dbReference type="eggNOG" id="COG0456">
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    </dbReference>
    <dbReference type="eggNOG" id="COG1846">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065219_0_0_9"/>
    <dbReference type="OrthoDB" id="1823496at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
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        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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            <begin position="4"/>
            <end position="139"/>
        </location>
    </feature>
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            <end position="306"/>
        </location>
    </feature>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
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            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="35768" checksum="A8914E84B9A7B5B1" modified="2011-01-11" version="1">MGSEMSLIPTIRKFNRFYTKVLGLLDKHLLDSNFSLSEARVLYEIGNTEHCTARMLIDLLSIDAGYLSRILKRFEKLGVIYRVQSEKDGRSFFLYLSSLGEETLSKMNTLSDNQIRNMIIGLPYQSQVSIARSMTNIERELSDNPTERSVSIRTELKPGDVGMLIHMHGWIYAKECGYNLFFEGYVCKTFYDLLQTYSSDKDRFWLAEANGEIIGSIAIISHSNEKAQLRWFMLHPDARGMGLGKKLLHEAISYCKERGYQFIFLETTEDQKTAIGMYVKAGFQKISEQENESWGKRHIEQTYELNLHEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G4</accession>
    <name>E3E4G4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplB9</name>
        <name evidence="7" type="ORF">PPSC2_12815</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56704.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00410"/>
    <dbReference type="EnsemblBacteria" id="ADO56704">
        <property type="protein sequence ID" value="ADO56704"/>
        <property type="gene ID" value="PPSC2_12815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2728"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="67"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="261"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="68"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56704.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="32961" checksum="FAD91958F96A1BA8" modified="2015-05-27" version="2">MRFGTGAIYHLMMLPGILFLLVFSYVPMVGVITAFQDYIPAKGMLGSKFVGLKHFIYMFKLPDIAQVFSNTLVIAIAKILLGTLMAIIFSILLNEIRIKFVKKSVQTIVYLPHFLSWVVLASVVVNMFSLDGIVNQILAFFGLENINFLGSNTWFQPLIIGTDVWKEFGYSSIVYLAAITSIDPGLYEAAGMDGASWWRKVWHITLPGMLPIILLMGVMSLTNILSAGFDQIYNLYNPVVYESGDILDTYVYRIGLVGRQYSFGTAVGLFKSVIGIVLLLSANQLAKKYTDRKIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4N2</accession>
    <name>E3E4N2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371532.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16050"/>
    <dbReference type="EnsemblBacteria" id="ADO56931">
        <property type="protein sequence ID" value="ADO56931"/>
        <property type="gene ID" value="PPSC2_13900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2970"/>
    <dbReference type="eggNOG" id="COG0596">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_088923_0_0_9"/>
    <dbReference type="OMA" id="LIIHGWQ"/>
    <dbReference type="OrthoDB" id="1119700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="47"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="272" mass="31551" checksum="3D8BBF43CA7F78D6" modified="2011-01-11" version="1">MPYCKVKNANIYYEEIGKGKPIIMIHGFTPDHRLMSGCMEPIFEDNSNWRRIYLDLPGMGQTKDYDQICNSDDMLEAVINFIETLVPNQDYLIAGESYGGYITRGIINRHKDRIGGAALICPLIIPEHKRRILPEHFVVHSDREFMDTLSEEQVSDFSANQVVLNEYNWKRYSEEIMAGCKIADYDFLSKIQRNYGFSTNIDELVFDKPTVFTLGRQDAVVGYIDAFRILDNYPRATFAVLDRAGHNLQIEQTLLFESLMREWLERVTEFGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y8</accession>
    <name>E3E4Y8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Stage III sporulation protein AA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spoIIIAA</name>
        <name evidence="4" type="ORF">PPSC2_15150</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371787.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02770"/>
    <dbReference type="EnsemblBacteria" id="ADO57196">
        <property type="protein sequence ID" value="ADO57196"/>
        <property type="gene ID" value="PPSC2_15150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3233"/>
    <dbReference type="eggNOG" id="COG3854">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052793_0_0_9"/>
    <dbReference type="OMA" id="MEWLELF"/>
    <dbReference type="OrthoDB" id="1619125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014217">
        <property type="entry name" value="Spore_III_AA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045735">
        <property type="entry name" value="Spore_III_AA_AAA+_ATPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19568">
        <property type="entry name" value="Spore_III_AA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02858">
        <property type="entry name" value="spore_III_AA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="3">
        <location>
            <begin position="149"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="331" mass="36515" checksum="4BD2AC0B8F3BAE15" modified="2011-01-11" version="1">MEWLELFPEPLHGILGRLPETVFKQLEEIRIREGRPLEVNANGDHHFVTTAGRLTLNPVEAYKPNREDAHRLLDFISNHSLYTMEEELRKGFITIPGGHRIGLAGRTVLNRGRVEHLRDISSFNVRIARAIPGIADRILPYVADRKSGMIRHTLILSPPQHGKTTLLRDLARQLSYGGMKSNGGRRNGLKVGIIDERSEIAGSHKGIPGFDVGPRTDILDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMASRSAFAGLATGQELFQLYVMLERTSRGVSFRLADAKQRRLTLPGEGQNGGISYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z4</accession>
    <name>E3E4Z4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqhQ</name>
        <name evidence="2" type="ORF">PPSC2_15180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371793.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02800"/>
    <dbReference type="EnsemblBacteria" id="ADO57202">
        <property type="protein sequence ID" value="ADO57202"/>
        <property type="gene ID" value="PPSC2_15180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3241"/>
    <dbReference type="eggNOG" id="COG3872">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038140_0_0_9"/>
    <dbReference type="OMA" id="LFQYHGA"/>
    <dbReference type="OrthoDB" id="1816476at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010787">
        <property type="entry name" value="DUF1385"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07136">
        <property type="entry name" value="DUF1385"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="213"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="37115" checksum="432A563B59EA7B63" modified="2011-01-11" version="1">MSQASKPVSYGGQAVIEGVMFGGKRVNVTAVRRKSGEITYLEVPRKEQSWVSKFRRIPLLRGIVSIIDSSAKGTKHLNYSADAYADDEVDPEERAEQKKKEESRWSLSMMIGVAAVGILSFLFGKIVLTLVPVVVESFLFDGLFHNQILHNLAEGAIKLILLLAYLWGISQTPLIKRLFQYHGAEHKVITAFEAGEELTPANVQKYSRLHYRCGSSFIMLTVIIGVLVYSLFTYDNLWERMGQRLLLLPIVLGLSFEFLKLTNALREIPVLRYLGYPGLWLQLLTTKEPTDDQVEVSIASFKRMLELDAELENVPVKETLNSPVLDPVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E587</accession>
    <name>E3E587_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372033.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3491"/>
    <dbReference type="EnsemblBacteria" id="ADO57447">
        <property type="protein sequence ID" value="ADO57447"/>
        <property type="gene ID" value="PPSC2_16340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3488"/>
    <dbReference type="HOGENOM" id="CLU_2602749_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="9027" checksum="23EC3B775C123149" modified="2011-01-11" version="1">MVNVNAAIEQLLDMRLELDDTIRLLGFDPEASDRQQAGTNERVLLHLQDIYDVLDAPRPNGDYAKQLVQETMKIAKEEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5G5</accession>
    <name>E3E5G5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ttr</name>
        <name evidence="2" type="ORF">PPSC2_17435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372265.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04775"/>
    <dbReference type="EnsemblBacteria" id="ADO57684">
        <property type="protein sequence ID" value="ADO57684"/>
        <property type="gene ID" value="PPSC2_17435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3725"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077728_1_1_9"/>
    <dbReference type="OMA" id="YRSAGWT"/>
    <dbReference type="OrthoDB" id="1809950at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="19378" checksum="2432EF29D6F644C7" modified="2011-01-11" version="1">MSNEVRIYPVQVLSETLSDSLSRLLIDVVADGASIGFLPPLGYQEAAAYWNSVLEDGVVLWIAEKDGVPVGTVQLQLAQKANATHRAEIAKLMVHPSGRRLGIARQLMKAAEEEAVRQNRTLLVLDTRVGDPSNRLYESIGFVEAGVIPNYAQSADGQLHATRYYYKPLNLYSSYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5H2</accession>
    <name>E3E5H2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyldiaminopimelate deacetylase</fullName>
            <ecNumber evidence="1">3.5.1.47</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">adpd</name>
        <name evidence="3" type="ORF">PPSC2_17470</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + N-acetyl-(2S,6S)-2,6-diaminoheptanedioate = (2S,6S)-2,6-diaminoheptanedioate + acetate</text>
            <dbReference type="Rhea" id="RHEA:20405"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:57609"/>
            <dbReference type="ChEBI" id="CHEBI:58767"/>
            <dbReference type="EC" id="3.5.1.47"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; LL-2,6-diaminopimelate from (S)-tetrahydrodipicolinate (acetylase route): step 3/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M20A family. N-acetyldiaminopimelate deacetylase subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.47" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372272.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04810"/>
    <dbReference type="MEROPS" id="M20.A27"/>
    <dbReference type="EnsemblBacteria" id="ADO57691">
        <property type="protein sequence ID" value="ADO57691"/>
        <property type="gene ID" value="PPSC2_17470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3732"/>
    <dbReference type="eggNOG" id="COG1473">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023257_0_1_9"/>
    <dbReference type="OMA" id="RAHACGH"/>
    <dbReference type="OrthoDB" id="796259at2"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00024"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050118">
        <property type="term" value="F:N-acetyldiaminopimelate deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01692">
        <property type="entry name" value="DapEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023905">
        <property type="entry name" value="AcetylDAP_deacetylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017439">
        <property type="entry name" value="Amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11014">
        <property type="entry name" value="PTHR11014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11014:SF98">
        <property type="entry name" value="PTHR11014:SF98"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005962">
        <property type="entry name" value="Pept_M20D_amidohydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01891">
        <property type="entry name" value="amidohydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="2">
        <location>
            <begin position="183"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="1">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="378" mass="42143" checksum="39A430A3081D9A31" modified="2011-01-11" version="1">MSTADDRSFVQIRRDLHQIPEPGFEEYKTQRYLLNYLETLPQERLDIRTWRTGVLVLIHGTAPERRYGYRCDMDGLPIEEETGYDFRSTHPGYMHACGHDLHMTIGLGIVTHFASHPIKDDLVVLFQPAEEGPGGALPMRDSTELADWMPDEIVALHVAPEYPVGTIATRSGILFANTSELFIDLKGTGGHAAYPHKANDMVVAACQLVGQLQTVVARNVNPLDAAVITVGKVSGGTKQNIIAETARLEGTIRTLSADTMTLVKSRIEALVRGVEAGFECQAKIHYGSNYLQVYNEAKVTEEFMKWVSNRQDVQLVECGEAMTGEDFGYFLERIPGLMFWLGVDTPYGLHHAKLEPAEEAIEVAIRVLTDYFTWKSQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E653</accession>
    <name>E3E653_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">Dcc</name>
        <name evidence="3" type="ORF">PPSC2_12985</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371342.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00675"/>
    <dbReference type="EnsemblBacteria" id="ADO56738">
        <property type="protein sequence ID" value="ADO56738"/>
        <property type="gene ID" value="PPSC2_12985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2766"/>
    <dbReference type="eggNOG" id="COG4632">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_437333_0_0_9"/>
    <dbReference type="OMA" id="TWIKITY"/>
    <dbReference type="OrthoDB" id="162888at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00063">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003961">
        <property type="entry name" value="FN3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036116">
        <property type="entry name" value="FN3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00041">
        <property type="entry name" value="fn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00060">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="4"/>
    </dbReference>
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        <property type="entry name" value="SSF49265"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50853">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fibronectin type-III" evidence="2">
        <location>
            <begin position="103"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="2">
        <location>
            <begin position="289"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="442"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="519"/>
            <end position="541"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="679" mass="73306" checksum="DE511623C06C0B87" modified="2011-01-11" version="1">MNKKRLRQWMAPFATATLILNTGYGILGPDAVASALPTERHNSNLTGLNIPQSHTKLATVQGRQIPITSSTKLTTLTGQKPNINQVMKLMSTQLVTANIAPAEVSNLTAIPTETTKVNLSWTNPSDINFDHVKVVNVTNDVYVDNIRSNSYMMSGLQPNTTYTFRVKTVNKSGNESLGTTVQVKTASTDAPVDKTPPGEVSGLTATNIGYNGFTINYILPKDADLSQAIIYLNGTEIQKTTGTSYTFNVLNAATAYTVMVKTIDKSGNISQGVSIPVTTSSVSTDIVPEVTGASVTSVNNYSVTVSWTKPSGISTVSLYKDGQLVTDSTGSSYTFNNLSASQTYTFTIKSKRSTGALSSGVKLTATTDSTSSNSSEVSNLEVDSKSDTWIKITYDMPSRAERVKIYVDGDYKGNTTSESYKITDLREGRWYEIKVITVNSSGRESSGVKISERTNSDGYYSSSSSSSNYEKARDLMRIAENSLNASDWRSARDAISDLPTGTRKSDLLDRLEAIRNRALGTSSSSSGTSSTTTTSGTTTSYTNNAVASYTTSFTLTPGAKTAYVDGRATTIAQAPKIINGVTMVPLRFISERVGYDVNYEKGTKKIILNRPTDGKQIVLQVKNSTLAVYELNNSRNYSTNITAPVIVNGYTLVPLRVISELSGYQVNYNSVSKQITITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E657</accession>
    <name>E3E657_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dhaR7</name>
        <name evidence="3" type="ORF">PPSC2_13005</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2776"/>
    <dbReference type="EnsemblBacteria" id="ADO56742">
        <property type="protein sequence ID" value="ADO56742"/>
        <property type="gene ID" value="PPSC2_13005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2770"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_28_1_9"/>
    <dbReference type="OMA" id="FQLQGYY"/>
    <dbReference type="OrthoDB" id="2047542at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="21225" checksum="67CD0004FE162770" modified="2011-01-11" version="1">MAAKPESYENIVQTASRLFFHQGYHATGLNQILAESGSPKGSLYYYFPHGKEELALECIRRGNEFIKQKLKQALSGNENPVVAIQDFIRHTAEEADRLGFDSFMPIGFWAAAETSCISESLRHACVNTFTDWQHIYMERLQESGLDEKKAHSLAVLIISMLEGALILAVTQQSSAPIYNIVDYIPQLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Q3</accession>
    <name>E3E6Q3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhiH3</name>
        <name evidence="2" type="ORF">PPSC2_20375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07630"/>
    <dbReference type="EnsemblBacteria" id="ADO58313">
        <property type="protein sequence ID" value="ADO58313"/>
        <property type="gene ID" value="PPSC2_20375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4346"/>
    <dbReference type="eggNOG" id="COG0842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057681_0_0_9"/>
    <dbReference type="OMA" id="DHLLVMP"/>
    <dbReference type="OrthoDB" id="1552415at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="179"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="256"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="291"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="348"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="388" mass="42687" checksum="44ED5F087C4704F9" modified="2011-01-11" version="1">MKAFIEEWKLMISGKMVFIMLLVPIVVAVAFGFVFKNNQLNGASVAVVDLDHSSYSRQLINKLDASQYIDVRHVQENEADPNLLLYNEKFFAVIYLPAGLEENRIKGVQSNIGFYVDNTVGQATGNLRSAVTEIMTTENAMLAGSGLKGMGMSDSQVTGLTSNMLLQQRMLYNPTNATLMTSVMGFINTVMISLIGATVLTIVPRLREQGRLKEELQHSYGLILRVLPYALVGCVSFYLSIGLLKQIGGLRFEANVWQISIPFLLYTISLSLFAMALGWNAANPGKASPRLLLIILPSFLLSGAQLPVAMLPTSLQYISNILPLTWHFKFLRGMGFKGGSLKYFIPELGGFLILLSGLLLLIFILIALEKRKLAKSEDAAVGVEPVLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R0</accession>
    <name>E3E6R0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YheD9</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yheD9</name>
        <name evidence="1" type="ORF">PPSC2_20405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372891.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07660"/>
    <dbReference type="EnsemblBacteria" id="ADO58320">
        <property type="protein sequence ID" value="ADO58320"/>
        <property type="gene ID" value="PPSC2_20405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4353"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_2_0_9"/>
    <dbReference type="OMA" id="YTCTRME"/>
    <dbReference type="OrthoDB" id="1740489at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="25078" checksum="B5AD9EDE549C7E20" modified="2011-01-11" version="1">MRQLASKWLKTKALLHHPHTAVYIPETCLYSEEQLRMMLRRHAFVFIKPVKGGGGGGVMRVAKEGRGYTCTRMEQTHRFSHFSALVVGIDKLRIQRPYLIQQGIQLASIQGRPVDYRVKVVKEGGKWEFRAVVARHARPGLVITNLCKGGTLLKGTEALRMIYPRRLAIRKRREIVELTQHCIPILERRFPGIGQLGFDYGLDWNGRIWILEVNTRPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R4</accession>
    <name>E3E6R4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pirin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_21185</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pirin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373035.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08415"/>
    <dbReference type="EnsemblBacteria" id="ADO58466">
        <property type="protein sequence ID" value="ADO58466"/>
        <property type="gene ID" value="PPSC2_21185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4503"/>
    <dbReference type="eggNOG" id="COG1741">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064194_2_2_9"/>
    <dbReference type="OMA" id="NLRVWND"/>
    <dbReference type="OrthoDB" id="729805at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012093">
        <property type="entry name" value="Pirin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003829">
        <property type="entry name" value="Pirin_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041602">
        <property type="entry name" value="Quercetinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43212">
        <property type="entry name" value="PTHR43212"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02678">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17954">
        <property type="entry name" value="Pirin_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006232">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pirin" evidence="3">
        <location>
            <begin position="9"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Pirin_C_2" evidence="4">
        <location>
            <begin position="147"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF17954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="27118" checksum="A7EA4494E8C57862" modified="2011-01-11" version="1">MIKIVTSAERHTSNKGWIHSEFSFSFADYEDPSNAHFGCMLAHNDNELKPQQGFKRHPHHDLEIVTYVIEGLLHHSDSLGHEQDLKSGSIQVMSAGTGIEHEERNPGDEKPVRFLQMWFLPESPGLQPSYQVQRFKHSERLNRLQPVVSGSEVEGALSIAQDINLYLSRLEKGQQLEYPQQEDRRTHIYIISGHVEVTCQDGEFQLRPGDAARIQKSCTLKILATGNEEISELVLVDLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E751</accession>
    <name>E3E751_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yurO7</name>
        <name evidence="5" type="ORF">PPSC2_23300</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373442.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10790"/>
    <dbReference type="EnsemblBacteria" id="ADO58906">
        <property type="protein sequence ID" value="ADO58906"/>
        <property type="gene ID" value="PPSC2_23300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4933"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_12_3_9"/>
    <dbReference type="OMA" id="NIPFARQ"/>
    <dbReference type="OrthoDB" id="480174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006061">
        <property type="entry name" value="SBP_1_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01037">
        <property type="entry name" value="SBP_BACTERIAL_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168214" evidence="4">
        <location>
            <begin position="28"/>
            <end position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="421" mass="47130" checksum="8B705B9949298CA7" modified="2011-01-11" version="1">MKKTVLLVISLMLLLTCMLAGCGNTKAQQSGTKTIHIYQFKVEISEPLNKLKAEYEKTHPGIKLDIQSVGGGTDYGASLKAKFASGDQPDIFTNEGYQDRDTWFEYLEDLSDQPWVKDLDDFARKPMTVNGKIYGQPMNLEGFGFVYNKDLFKKAGITKLPQTLDELEEAAKRLKAAGIIPFANGYAEWWVLGNHFINIPFARQSNPESYVADLNKGTARIPGNPVFDQWVKLLDLTLKYGNPNPLTTDYNTQVTLFSTGKAAMMHQGNWTQPQIDGINPNLNLGILPSPIDNDSSTGDKLAVGVASNWVVNKNSPVKQEAKEFLNWLVTSETGKHYITKEFKFVPAFKSITSSDETTGDLGAEISRHVKEGKIWSWNFQRFPKGLNQDLSSSMQAYIAGVITKDEMLQQFQGAWDNLKYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7A4</accession>
    <name>E3E7A4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373495.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11050"/>
    <dbReference type="EnsemblBacteria" id="ADO58959">
        <property type="protein sequence ID" value="ADO58959"/>
        <property type="gene ID" value="PPSC2_23550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4986"/>
    <dbReference type="eggNOG" id="ENOG5032T4C">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_128130_0_0_9"/>
    <dbReference type="OMA" id="GYNAMFC"/>
    <dbReference type="OrthoDB" id="1630569at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="21204" checksum="7C5EED59A24C225B" modified="2011-01-11" version="1">MTETQHTKLGPAYLEDWVVPENPEAWVEQEWTGKLRSQAGNTKFHIFYYGEFMDELIAVTEFAPQLIIAEDAVTGEQIVIFDGTRHGYDALLCEVYTEEQQNNRTPLLPYLDDDGEDTFEVTVTAFYNVDWDDEFADDVDENGQLELISGERCDFEEAKRNGFDAISITITSAKGLKTEILQEELA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7C1</accession>
    <name>E3E7C1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">MacB_PCD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_24350</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373666.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5195"/>
    <dbReference type="EnsemblBacteria" id="ADO59132">
        <property type="protein sequence ID" value="ADO59132"/>
        <property type="gene ID" value="PPSC2_24350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5156"/>
    <dbReference type="eggNOG" id="ENOG5033H40">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_796089_0_0_9"/>
    <dbReference type="OMA" id="WIQERTY"/>
    <dbReference type="OrthoDB" id="1923749at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025857">
        <property type="entry name" value="MacB_PCD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12704">
        <property type="entry name" value="MacB_PCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="231"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="279"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="311"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="domain" description="MacB_PCD" evidence="7">
        <location>
            <begin position="98"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF12704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="352" mass="40280" checksum="6E3F8BCA643019F8" modified="2011-01-11" version="1">MKSKLKEISGNGLIPIFVLYFLLSMIMISVSYYMVQQKELDSLSRGLYQENSLFFMVDQNSAHELDWRKLRTTYPFTIFKELETGEMNVRALYYKEDTYKPPIVAGRFFNEDDFYSDHRYAVIGQHIAESALTSLDGRRYYLFQGKKFEVIGSMGAAYPSTLDTTVLLNLDALGQQTHLNNIYVLNSPAVSSVIKNGYLIFENLSAKVNVFDRGDAGAQRYVGIDIYRNTIIITVFLLLVCSSVIFTMNWYDKKKTEITWLWIMGIKSEKAIVKFSKRYYVAVSLSYLLMCTISLFLFLIAGASIENIELYVQYLLIGYVLILLSSYLSISVTVKRIGRSGKDLSLNENGIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7D2</accession>
    <name>E3E7D2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PPSC2_24400</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the glycosyltransferase 87 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59143.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5206"/>
    <dbReference type="EnsemblBacteria" id="ADO59143">
        <property type="protein sequence ID" value="ADO59143"/>
        <property type="gene ID" value="PPSC2_24400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5167"/>
    <dbReference type="eggNOG" id="COG5650">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032554_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018584">
        <property type="entry name" value="GT87"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09594">
        <property type="entry name" value="GT87"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="214"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="316"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="347"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="398"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="469"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="496"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="519"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="539"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="566"/>
            <end position="586"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="39"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="66"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59143.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="614" mass="66010" checksum="0C64A05E14F77592" modified="2015-05-27" version="2">MNVWKANGLKYILLFSLILCAAVSIVSLWSYSGSSASQSAAVRQGPSGGFGGGAGGGMGGPAQRPSDGQTAGNLGTGSVGQDQQNSLPTSTDAASSSDSKNQGTTGQTTNSSSENSSTSGDKGTTAGNDTSASDGSGVARDGQHRGPGGMSGNGSGMGMGGPGGGMGGGRNGNSSSAYATPMAIFAALFFGAFVFIAYRFRAQEWKLGERNRGLMLWTVLGVGFSLRMAIAPWISGHMDLMLFRNWATTAADSLSGFYTNGSSDYPPFYIYILYVIGKIGSTDAFSPYMSVLLRLPNILADIVTAYMLYRLASKRVGYGVSLGLAIFYVFNPAVFINSTFWGQVDSFFTMLIVGMIVLLVENRIGWSAVLFTIAVLMKPQGIIYGPVLFFELLRQRKIQPWLLSIGGAVVTTILVILPFSWGQEPLWLLDLYKGTVGEYPYASVNAYNFFALIGGNYTQDTTTLFLFSYHTWGMICIVLVTLFTWWMYIRSRKPQFAAAAALVLIAGVFTFASSMHERYLFPAAALAVLAYLYLKDRRFLWLAGGFSLTIFLNTFDIFYSSNSQDHYGIILCVTSLLNVLLFGYLVKVVWDCSRPATIQAALPKATNIAPLSAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7F3</accession>
    <name>E3E7F3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ugpB5</name>
        <name evidence="2" type="ORF">PPSC2_24495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373697.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11970"/>
    <dbReference type="EnsemblBacteria" id="ADO59164">
        <property type="protein sequence ID" value="ADO59164"/>
        <property type="gene ID" value="PPSC2_24495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5189"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_12_3_9"/>
    <dbReference type="OMA" id="ANAYKEW"/>
    <dbReference type="OrthoDB" id="480174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168223" evidence="1">
        <location>
            <begin position="32"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="434" mass="47430" checksum="6A929A9C3F334B93" modified="2011-01-11" version="1">MLKKMMALSGSLLLTVGLLSGCGGSGGTDAAKESTGGKEDLKTVTINMFTASPEYTDAFNAYIEEYKKVKPNVKINLEIMQADYNTILKSKIASGSTPDVFQTTAGGDIDTYADYSADLTNEPLAAAMTDAVRANMSSSDGKVLGLPVKGNLFALIYNKDLLTKAGITSPPKTIAEMQDAVTKLEAKGITPFANAYKEWWVWKHIFQHYVDAAAQDAGVEPKQLVNDFIAGKAKIKDYPVLYNNFFSFIDLTVKHGTDKPLERDSNAEVSDFASGKAAFMTGKGAWDEEAIKKINPDLKIGIMGYPVSDKADQSVIITGADQALRINKDSEVSKETIEFFNWLYTSEYGKNWFSQVAKVIPPIKDAPLPDLEMPKEMESILKTSKSGDLSVNYSLDTFHQKFGELMQAYISGNMNKDQAVAEIEKAWVQLGSAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7K1</accession>
    <name>E3E7K1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">D-ribose pyranase</fullName>
            <ecNumber evidence="2 5">5.4.99.62</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">rbsD</name>
        <name evidence="6" type="ORF">PPSC2_13310</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>beta-D-ribopyranose = beta-D-ribofuranose</text>
            <dbReference type="Rhea" id="RHEA:25432"/>
            <dbReference type="ChEBI" id="CHEBI:27476"/>
            <dbReference type="ChEBI" id="CHEBI:47002"/>
            <dbReference type="EC" id="5.4.99.62"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Carbohydrate metabolism; D-ribose degradation; D-ribose 5-phosphate from beta-D-ribopyranose: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodecamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the RbsD / FucU family. RbsD subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.62" evidence="2 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371409.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01000"/>
    <dbReference type="EnsemblBacteria" id="ADO56806">
        <property type="protein sequence ID" value="ADO56806"/>
        <property type="gene ID" value="PPSC2_13310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2836"/>
    <dbReference type="eggNOG" id="COG1869">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_135498_0_0_9"/>
    <dbReference type="OMA" id="IIRTGEC"/>
    <dbReference type="OrthoDB" id="1750843at2"/>
    <dbReference type="UniPathway" id="UPA00916">
        <property type="reaction ID" value="UER00888"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0062193">
        <property type="term" value="F:D-ribose pyranase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016872">
        <property type="term" value="F:intramolecular lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048029">
        <property type="term" value="F:monosaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019303">
        <property type="term" value="P:D-ribose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01661">
        <property type="entry name" value="D_rib_pyranase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023064">
        <property type="entry name" value="D-ribose_pyranase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023750">
        <property type="entry name" value="RbsD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007721">
        <property type="entry name" value="RbsD_FucU"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37831">
        <property type="entry name" value="PTHR37831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05025">
        <property type="entry name" value="RbsD_FucU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102546">
        <property type="entry name" value="SSF102546"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="132"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="20"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="15748" checksum="3282F72943209595" modified="2011-01-11" version="1">MKKHGILNSHISKILADLGHTDFIVVADAGLPVPEGVTKIDLALKLGVPSFQDVVDVIAADMVIEKVTLAEEIKQENEQALQYIMRTFAGEQLEHSQIIEPTTVIEFCSHEQFKALTRQAKAVIRTGEATPFANCILQAGVHFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7S8</accession>
    <name>E3E7S8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">padR5</name>
        <name evidence="3" type="ORF">PPSC2_14035</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371561.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01690"/>
    <dbReference type="EnsemblBacteria" id="ADO56961">
        <property type="protein sequence ID" value="ADO56961"/>
        <property type="gene ID" value="PPSC2_14035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2997"/>
    <dbReference type="eggNOG" id="COG1695">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089258_1_3_9"/>
    <dbReference type="OMA" id="VRDEFFM"/>
    <dbReference type="OrthoDB" id="1629615at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018309">
        <property type="entry name" value="Tscrpt_reg_PadR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005149">
        <property type="entry name" value="Tscrpt_reg_PadR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03551">
        <property type="entry name" value="PadR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10400">
        <property type="entry name" value="Vir_act_alpha_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PadR" evidence="1">
        <location>
            <begin position="8"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Vir_act_alpha_C" evidence="2">
        <location>
            <begin position="89"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="21930" checksum="D9559C21D91CBB9D" modified="2011-01-11" version="1">MNLLSYGLLGLLAREESSGYDLMLRIQPFWQAKHSQIYPLLARMESKELLASRWIQQSDKPDKKMYTITDKGIHMLQQWSQETLAAPVTRDELSLRLFCLWLTDKTSANRMLEERKRYFIQKIRHLEDILNDIPAENLHFGSKNFGDYILVQKGLMNAKAGLEWCQMVLRMLLAGDVRADTNPFLLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7S9</accession>
    <name>E3E7S9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_14040</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371562.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01695"/>
    <dbReference type="EnsemblBacteria" id="ADO56962">
        <property type="protein sequence ID" value="ADO56962"/>
        <property type="gene ID" value="PPSC2_14040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2998"/>
    <dbReference type="eggNOG" id="ENOG5032TGE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_142076_0_0_9"/>
    <dbReference type="OMA" id="KNMMMLM"/>
    <dbReference type="OrthoDB" id="1801141at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168054" evidence="3">
        <location>
            <begin position="32"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="113"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="15602" checksum="9FC676193937F39A" modified="2011-01-11" version="1">MKKTFTLKNMMMLMMAFTLLIAMIAPSTADARRGGGFKSGPKSYQSTPSKANDSSGINKSDSGTKSSAATGNTSRTGGFLGGGGGFLKGMMLGGLAGMLFGGLFGNMGALGSLLGLAVNVLAIYVLIMVGVGIYRAIKNRRRPDDSRGGRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T4</accession>
    <name>E3E7T4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14065</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371567.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01720"/>
    <dbReference type="EnsemblBacteria" id="ADO56967">
        <property type="protein sequence ID" value="ADO56967"/>
        <property type="gene ID" value="PPSC2_14065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3003"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055111_0_0_9"/>
    <dbReference type="OMA" id="QWFRGYC"/>
    <dbReference type="OrthoDB" id="937913at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="444" mass="50152" checksum="0C6CE514FB02FF7F" modified="2011-01-11" version="1">MMKMWDSNVNEPFILFGNSGNRRTTGLQKARSRLMLPPALEVSYTDVLGAIREKHSLSELMVRIAAQAAQDSVNGSVHVRESIDQLLAGRVDRGPLLRLDAPGENFEVERELIALGAPDAEGDDSLLPWPEWAHDTGILAAEARRLQEQHGRIWHPAQWFRGYCRLLAWLRHEVDRLWPSSRWMNDPAEVAVMFDKRRCSAVLDQADIRVPPVLTASGGAFRDAVDLHTAMKESGFHRVFVKIFCGSGASGVMAYQVHPQTHAELAVTTIGTEIIHGQRVYYNAGRLRRYTDKQDIHAILNWLCLEGVHVERWIPKATLNGRVYDVRQLVCESEACHAVLRLSHSPITNLHLRNERLLLEEAGLPQNTVESVQHTAIAAMRVFPSSMVAGLDVLVPAHGGRPYVLDVNPFGDLLYRVEYQGWNPYEWEMLHLANRSVVLERKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7U0</accession>
    <name>E3E7U0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flavodoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ykuP</name>
        <name evidence="6" type="ORF">PPSC2_14095</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Low-potential electron donor to a number of redox enzymes.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the flavodoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371573.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01750"/>
    <dbReference type="EnsemblBacteria" id="ADO56973">
        <property type="protein sequence ID" value="ADO56973"/>
        <property type="gene ID" value="PPSC2_14095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3009"/>
    <dbReference type="eggNOG" id="COG0716">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051402_4_2_9"/>
    <dbReference type="OMA" id="ENCRAYG"/>
    <dbReference type="OrthoDB" id="1961680at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010087">
        <property type="entry name" value="Flav_short"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001094">
        <property type="entry name" value="Flavdoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00258">
        <property type="entry name" value="Flavodoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00369">
        <property type="entry name" value="FLAVODOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01753">
        <property type="entry name" value="flav_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0288">FMN</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="5">
        <location>
            <begin position="6"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU367037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="152" mass="16643" checksum="F70790E47CA234FC" modified="2011-01-11" version="1">MNLGKIMIAYASMTGNTEEIAELIAEGVRQAGHEAELKASYDCSAQELLAYDGFLLGVYTWGDGELPDEFLDFYEELDELDLSGKKTAVFGSGDTSYTQFCGAVDLVEEKVKERGASVVQESLKIEFNPLDDEKENCRAYGRQFAQAGIGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Z2</accession>
    <name>E3E7Z2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Cytidylate kinase</fullName>
            <shortName evidence="8">CK</shortName>
            <ecNumber evidence="8">2.7.4.25</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Cytidine monophosphate kinase</fullName>
            <shortName evidence="8">CMP kinase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">cmk</name>
        <name evidence="10" type="ORF">PPSC2_14725</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + CMP = ADP + CDP</text>
            <dbReference type="Rhea" id="RHEA:11600"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58069"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.25"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>ATP + dCMP = ADP + dCDP</text>
            <dbReference type="Rhea" id="RHEA:25094"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57566"/>
            <dbReference type="ChEBI" id="CHEBI:58593"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.25"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the cytidylate kinase family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.25" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371701.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02360"/>
    <dbReference type="EnsemblBacteria" id="ADO57105">
        <property type="protein sequence ID" value="ADO57105"/>
        <property type="gene ID" value="PPSC2_14725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3142"/>
    <dbReference type="eggNOG" id="COG0283">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079959_0_2_9"/>
    <dbReference type="OMA" id="RAITWWM"/>
    <dbReference type="OrthoDB" id="776861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036430">
        <property type="term" value="F:CMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036431">
        <property type="term" value="F:dCMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006220">
        <property type="term" value="P:pyrimidine nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02020">
        <property type="entry name" value="CMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00238">
        <property type="entry name" value="Cytidyl_kinase_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003136">
        <property type="entry name" value="Cytidylate_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011994">
        <property type="entry name" value="Cytidylate_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02224">
        <property type="entry name" value="Cytidylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00017">
        <property type="entry name" value="cmk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cytidylate_kin" evidence="9">
        <location>
            <begin position="14"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="18"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="26012" checksum="47A296E4FDE03FDB" modified="2011-01-11" version="1">MARQHASSINKINVAIDGPAGAGKSTVARLVAKALSYVYVDTGAMYRAATWYMMCKEISAENVQKVLQHVPELVIELVPDPTGQKVYCNGEDVTTVIRSMEVTSNVSQYSSIAGLRTRLTENQREMAARKGVVMDGRDIGTTVLPDAEVKVFMTASVQERASRRFKELSETDDITLEQLERDIAARDKFDEEREVSPLRCSEDAIVLDTTHMGIQDVVDTIVSYCLTEKDGEISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E847</accession>
    <name>E3E847_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57160.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599988.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3201"/>
    <dbReference type="EnsemblBacteria" id="ADO57160">
        <property type="protein sequence ID" value="ADO57160"/>
        <property type="gene ID" value="PPSC2_14980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3197"/>
    <dbReference type="eggNOG" id="ENOG503069T">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2754096_0_0_9"/>
    <dbReference type="OrthoDB" id="2026957at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="29"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57160.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8888" checksum="2D1744D273B800FD" modified="2015-05-27" version="2">MKGRVEGMDEKNTDYSAKKRVLLEQGLISRQALELIIELETELDFLSKQNESFRKALRAKSAQSPRMATKLRDALYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8P6</accession>
    <name>E3E8P6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yceC</name>
        <name evidence="3" type="ORF">PPSC2_17770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CAPAB/TerDEXZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372335.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05055"/>
    <dbReference type="EnsemblBacteria" id="ADO57755">
        <property type="protein sequence ID" value="ADO57755"/>
        <property type="gene ID" value="PPSC2_17770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3798"/>
    <dbReference type="eggNOG" id="COG2310">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055120_2_0_9"/>
    <dbReference type="OMA" id="VQIYNGQ"/>
    <dbReference type="OrthoDB" id="1437267at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06974">
        <property type="entry name" value="TerD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003325">
        <property type="entry name" value="TerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02342">
        <property type="entry name" value="TerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TerD" evidence="2">
        <location>
            <begin position="1"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="21123" checksum="EBDB618F284B7E8B" modified="2011-01-11" version="1">MSISLVKGQKVDLTKNNPHLSVLKVGLGWDPMKGRNMDIDASALLLNENGKLTQTKNLVYFGNKNSPCGAIVHSGDNLTGHGDGDDEVITVSLQKLPPEVHRVVFIVNIFRFFSFGRRKDFSMVNNAYIRILDASQDEEILRYNLTEDYKGMCSIRVGEVYRYGGEWKFGAIGEGSTITSLNELVKTYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8T1</accession>
    <name>E3E8T1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">PTS beta-glucoside transporter subunit IIABC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">bglP5</name>
        <name evidence="16" type="ORF">PPSC2_17940</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372370.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3837"/>
    <dbReference type="EnsemblBacteria" id="ADO57790">
        <property type="protein sequence ID" value="ADO57790"/>
        <property type="gene ID" value="PPSC2_17940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3834"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_2_2_9"/>
    <dbReference type="OMA" id="LWQVCVI"/>
    <dbReference type="OrthoDB" id="328780at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036878">
        <property type="entry name" value="Glu_permease_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018113">
        <property type="entry name" value="PTrfase_EIIB_Cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001127">
        <property type="entry name" value="PTS_EIIA_1_perm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011297">
        <property type="entry name" value="PTS_IIABC_b_glu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001996">
        <property type="entry name" value="PTS_IIB_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00358">
        <property type="entry name" value="PTS_EIIA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00367">
        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55604">
        <property type="entry name" value="SSF55604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00830">
        <property type="entry name" value="PTBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01995">
        <property type="entry name" value="PTS-II-ABC-beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51093">
        <property type="entry name" value="PTS_EIIA_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51098">
        <property type="entry name" value="PTS_EIIB_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01035">
        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="108"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="140"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="172"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="252"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="306"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="336"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="368"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="393"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="438"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="14">
        <location>
            <begin position="4"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="15">
        <location>
            <begin position="103"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-1" evidence="13">
        <location>
            <begin position="508"/>
            <end position="612"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO57790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="638" mass="68108" checksum="3E83D7ED44175940" modified="2011-01-11" version="1">MKYETLAQDIIRNVGGKENVNSLTHCITRLRFKLKDENKANTEVLKNMDGVVTVVKSGGQYQVVIGNHVPEVYADVATIGGFQAGDSEEASGEKVSLFNRFIDTISGVFTPTLGVLSATGMIKGFTALFVALGWMTATSGTYQILNALGDCLFYFFPIFLGYTSAKKFNANIFIGMAIGASLVYPTFSTITASGKPLYTLFSGTIFESPVYITFLGIPVILMSYASTVLPIIISTYVGSKIENFFKKVIPSVVRTFLVPFFTLLVIVPLALIVIGPLSTWAGQLLGAATLFVYNLSPIIEGIIMGAFWQVFVIFGLHWGLVPIAMNNLAVLKFDPILAATLGASFAQTGVVLAILFKTKNVKLRSLSIPAVISGIFGVTEPAIYGITLPRKKPFILSCIASAVGGGIIGMMGTKGYIIGGLGIFAIPSYISPSGIDSGFYGAVIGILVSFVLGFLLMFFGGFRDDEVKETKKEASTTGAAKGGEVLVRQETVISPLMGDVKPLSEVTDEAFSTGALGKGIAIEPSEGKVVSPVDGVLTSLFSSGHAIGITSDQGVEILIHVGKDTVKLKGKHFYPKVKQGEAVKKGQLLMEFDMEAIKEAGYVLTTPVIVANTASYLDVIETEKKKIGYKDDLLTVMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E967</accession>
    <name>E3E967_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 9 11">Uracil-DNA glycosylase</fullName>
            <shortName evidence="9">UDG</shortName>
            <ecNumber evidence="4 9 11">3.2.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">ung</name>
        <name evidence="13" type="ORF">PPSC2_15835</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 9 11">Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9 11">
            <text>Hydrolyzes single-stranded DNA or mismatched double-stranded DNA and polynucleotides, releasing free uracil.</text>
            <dbReference type="EC" id="3.2.2.27"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9 11">Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.27" evidence="4 9 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371926.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03530"/>
    <dbReference type="EnsemblBacteria" id="ADO57340">
        <property type="protein sequence ID" value="ADO57340"/>
        <property type="gene ID" value="PPSC2_15835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3381"/>
    <dbReference type="eggNOG" id="COG0692">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032162_3_0_9"/>
    <dbReference type="OMA" id="PDNGYLM"/>
    <dbReference type="OrthoDB" id="1260295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004844">
        <property type="term" value="F:uracil DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd10027">
        <property type="entry name" value="UDG-F1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00148">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002043">
        <property type="entry name" value="UDG_fam1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018085">
        <property type="entry name" value="Ura-DNA_Glyclase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11264">
        <property type="entry name" value="PTHR11264"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00986">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00628">
        <property type="entry name" value="ung"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00130">
        <property type="entry name" value="U_DNA_GLYCOSYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 11" id="KW-0227">DNA damage</keyword>
    <keyword evidence="8 9 11" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7 9 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="12">
        <location>
            <begin position="47"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="9 10">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00018429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="25376" checksum="53C39A7794FED8B3" modified="2011-01-11" version="1">MFGNDWDDVLREEVEKPYFNELRYTLAREYKLHKVYPPKEDLFSALKLTPYHLTKAVILGQDPYHGEGQAHGLSFSVRPGVRTPPSLQNIYKELRDDVGTPIPNQGYLVPWAEQGVLLLNNVLTVREGQPQSHQGIGWERFTDAVIEAINEREQPVVFILWGSHAQKKASFVNTSKHLVLKSVHPSPLAAHRGFFGSKPFSRTNAFLQEHGMEPIQWEIPNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9F4</accession>
    <name>E3E9F4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosomal protein L11 methyltransferase</fullName>
            <shortName evidence="2">L11 Mtase</shortName>
            <ecNumber evidence="2">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">prmA</name>
        <name evidence="3" type="ORF">PPSC2_16970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Methylates ribosomal protein L11.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>L-lysyl-[protein] + 3 S-adenosyl-L-methionine = 3 H(+) + N(6),N(6),N(6)-trimethyl-L-lysyl-[protein] + 3 S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:54192"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:13826"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61961"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the methyltransferase superfamily. PrmA family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372167.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04305"/>
    <dbReference type="EnsemblBacteria" id="ADO57585">
        <property type="protein sequence ID" value="ADO57585"/>
        <property type="gene ID" value="PPSC2_16970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3624"/>
    <dbReference type="eggNOG" id="COG2264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049382_0_1_9"/>
    <dbReference type="OMA" id="EFFFIFP"/>
    <dbReference type="OrthoDB" id="1712450at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008276">
        <property type="term" value="F:protein methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00735">
        <property type="entry name" value="Methyltr_PrmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004498">
        <property type="entry name" value="Ribosomal_PrmA_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000401">
        <property type="entry name" value="RPL11_MTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00406">
        <property type="entry name" value="prmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <position position="162"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="183"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="321" mass="35562" checksum="49DA064182335B2D" modified="2011-01-11" version="1">MLWNEITIHTSEEAVEMISNFLHEAGAGGVSIEESGSLNKPRDTSYGQWYDRPLNDIPEGQAIIKGYFAEEIDMDSVRAQIEPRVEQLRTFDIDPGEVRYELKTVNEDDWANAWKQYFKPLRVSDHLTIKPTWEEYEPASEDEKIIELDPGMAFGTGTHPTTSLCLRTLESVIQGGEEVIDVGTGSGILAIGAIKLGAKHVLALDLDPVAVSSARENTRLNGLEERITIKESDLLSVLNASDPTLGIQLPVKLVVANILAEIILLFIDDVYNALQPGGIYIASGIWKNKEEAVETALKAAGFEIAEINRDEDWLAFVARKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Q2</accession>
    <name>E3E9Q2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Butanediol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">adhB1</name>
        <name evidence="5" type="ORF">PPSC2_18175</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372421.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05500"/>
    <dbReference type="EnsemblBacteria" id="ADO57842">
        <property type="protein sequence ID" value="ADO57842"/>
        <property type="gene ID" value="PPSC2_18175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3883"/>
    <dbReference type="eggNOG" id="COG1063">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026673_11_0_9"/>
    <dbReference type="OMA" id="ETWYAMS"/>
    <dbReference type="OrthoDB" id="972769at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="4">
        <location>
            <begin position="8"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="350" mass="37807" checksum="7CB02AB209EB2B05" modified="2011-01-11" version="1">MQALRWHGVKDLRLENIEQPAALPGKVKIKVEWCGICGSDLHEYVAGPIFIPENAQHPLTGEKAPVVMGHEFSGQVVEIGEGVTKIQVGDRVVVEPVFACGECDACKQGKYNLCDKMGFLGLAGGGGGFSEYVAADEHMVHKIPESVSFEQGALVEPSAVALYAVRQSQLKVGDKAVVFGAGPIGLLVIEALKASGASEIYAVELSEERKAKAEELGAIVLDPKTYDVVEELHKRTNGGVDVAYEVTGVPPVLTQAIESTKISGQIMIVSIFEKDAPIKPNNIVMKERNLTGIIGYRDVFPAVISLMEKGYFPADKLVTKRIKLEEVIEQGFEGLLKEKNQVKILVSPQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9R2</accession>
    <name>E3E9R2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57852.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886134.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57852">
        <property type="protein sequence ID" value="ADO57852"/>
        <property type="gene ID" value="PPSC2_18225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3893"/>
    <dbReference type="eggNOG" id="ENOG5030630">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2424190_0_0_9"/>
    <dbReference type="OrthoDB" id="1899073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57852.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="10558" checksum="2149941F73158E06" modified="2015-05-27" version="2">MEHTNSSENTAKEYESLVQQEDEHIERLKTCTKLIWDALAIISQKASVLHMATVKEAADHLHIMELDLRRELFKVRLKKSILANKMKQTQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA57</accession>
    <name>E3EA57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mviN</name>
        <name evidence="8" type="ORF">PPSC2_20545</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372919.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07800"/>
    <dbReference type="EnsemblBacteria" id="ADO58349">
        <property type="protein sequence ID" value="ADO58349"/>
        <property type="gene ID" value="PPSC2_20545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4382"/>
    <dbReference type="eggNOG" id="COG2244">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022017_2_1_9"/>
    <dbReference type="OMA" id="FQGRGNM"/>
    <dbReference type="OrthoDB" id="749401at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13124">
        <property type="entry name" value="MATE_SpoVB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024923">
        <property type="entry name" value="PG_synth_SpoVB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029303">
        <property type="entry name" value="Polysacc_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002797">
        <property type="entry name" value="Polysacc_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01943">
        <property type="entry name" value="Polysacc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14667">
        <property type="entry name" value="Polysacc_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038958">
        <property type="entry name" value="PG_synth_SpoVB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="162"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="187"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="240"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="295"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="329"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="396"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="419"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="453"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="486"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="domain" description="Polysacc_synt_C" evidence="7">
        <location>
            <begin position="365"/>
            <end position="512"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="544" mass="58077" checksum="C9B3E2928E242E29" modified="2011-01-11" version="1">MSNKETFLKGTLILAAAALVARVLGLVQRVPLEHLLGSVGNASFTIANNAYLMLLTVATAGIPSTLSKMVSERYALDRPAEARRVYRAALIFAAVAGVIITALLYFGAPYFAEHVAGVPQSALAIQALAPALLLFPAIAMMRGYFQGRGNMTAGGISQIVEQVARVATAILLAFIILKLGYGDREVAAGASFGGVMGSLGALGVMLYYTVKLRRQDRQDRQEQFQEESSALPMMRIYKDIFKLSIPIVLSSLTVPAVNFIDTSIVVRLLSGQVGLDQATTQLGYLGSRAQSVAGIPPILAIALSQSLIPIISAAFARKDEQHLQNQMTLALRISILTGMPIVLALCVTAYSINGLLFSSLGGSGIIAVLTLGTIFQITMMTSNSILIGMGKPRISMVNVMVGIVVKLAASWLLAGWLGIYGIIAATGLCFLVITLLNLRVLKGIVSFSIMGRRWAGFLTAVVVSGAIGYGVNEACILLVHLMPARVAFLIACCIAGAVVLVCYLVLLVVLRVLRRDELGNYPRVLQKVLRPLMRLQRESTGQRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAB2</accession>
    <name>E3EAB2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yhcA5</name>
        <name evidence="10" type="ORF">PPSC2_21480</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. EmrB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373098.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4581"/>
    <dbReference type="EnsemblBacteria" id="ADO58530">
        <property type="protein sequence ID" value="ADO58530"/>
        <property type="gene ID" value="PPSC2_21480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4567"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_28_0_9"/>
    <dbReference type="OMA" id="GNICYGA"/>
    <dbReference type="OrthoDB" id="1108236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004638">
        <property type="entry name" value="EmrB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00711">
        <property type="entry name" value="efflux_EmrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="75"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="133"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="162"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="195"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="226"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="263"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="300"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="328"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="481"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="10"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="507" mass="54262" checksum="6EF8D25B2E8088FB" modified="2011-01-11" version="1">MDQKMSVGRILSVLLLGAFISILNQTLLNVAIPHLMNDFNVSATTVQWLSTGYMLTNGILIPITAFLIESFGTRALFISAMGLFTAGSVVCAASTGFAPMLVGRVIQASGAGIIMPVVMNVFLTVFPPEKRGAAMGTMGIAMMFAPAIGPTLSGYIVEHYSWRLLFLLVIPLAVIDILFAIRWLKNVSKLTKPNFDLLGTIFSTLGFGFLLYGFSSAGDKGWSSNTVILTLAAGVVFIVLFIVRELNMIQPMLEFRVFKYNIFTVSTLVGATVNMTMFGGMLLLPIYLQNIRGFTPLQSGLLLLPGALLMGVMSPISGAVFDRIGARPLAIIGLIITAVTTWEFSLLTDATTYGHIMIIYTIRSFGMSLLMMSVQTEGLNQLPAHLGSHGTAMSNTVRQIAGSIGTAWLITVMSSRTTVHMADYANVATTANASVTEGVSQLGQTLAQSAGISAESGSALALQQVYRSAVTESTIHGINDAFIIATGIALAGLLFSLFLRRSTPRHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAB8</accession>
    <name>E3EAB8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cytochrome bo(3) ubiquinol oxidase subunit 4</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Cytochrome o ubiquinol oxidase subunit 4</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Oxidase bo(3) subunit 4</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Ubiquinol oxidase polypeptide IV</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Ubiquinol oxidase subunit 4</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="primary">cyoD</name>
        <name evidence="16" type="ORF">PPSC2_21510</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterooctamer of two A chains, two B chains, two C chains and two D chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome c oxidase bacterial subunit 4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373103.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08705"/>
    <dbReference type="EnsemblBacteria" id="ADO58536">
        <property type="protein sequence ID" value="ADO58536"/>
        <property type="gene ID" value="PPSC2_21510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4573"/>
    <dbReference type="eggNOG" id="COG3125">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_140945_1_1_9"/>
    <dbReference type="OMA" id="IVVHMVF"/>
    <dbReference type="OrthoDB" id="2088013at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009486">
        <property type="term" value="F:cytochrome bo3 ubiquinol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015990">
        <property type="term" value="P:electron transport coupled proton transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005171">
        <property type="entry name" value="Cyt_c_oxidase_su4_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014210">
        <property type="entry name" value="Cyt_o_ubiqinol_oxidase_su4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03626">
        <property type="entry name" value="COX4_pro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02847">
        <property type="entry name" value="CyoD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00030071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00031887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00032185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO58536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="111" mass="12284" checksum="BAFD34743648D90E" modified="2011-01-11" version="1">MAQHQSGAGSHGHDDSHGSVKSYVIGFILSIVLTIIPLFVVMNHMLSRTSTMVVILAAAVLQFLVQLFFFMHIRESNGPRWNVMTLIFGVVILLTVVGGSVWIMEYNMVAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAE1</accession>
    <name>E3EAE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YkrK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ykrK</name>
        <name evidence="1" type="ORF">PPSC2_21620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373126.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08815"/>
    <dbReference type="EnsemblBacteria" id="ADO58559">
        <property type="protein sequence ID" value="ADO58559"/>
        <property type="gene ID" value="PPSC2_21620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4597"/>
    <dbReference type="eggNOG" id="ENOG502ZC9F">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1140785_0_0_9"/>
    <dbReference type="OMA" id="YDFEHIR"/>
    <dbReference type="OrthoDB" id="1118538at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014975">
        <property type="entry name" value="DUF1836"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40056">
        <property type="entry name" value="PTHR40056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08876">
        <property type="entry name" value="DUF1836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="29883" checksum="7D12BFB377A3C652" modified="2011-01-11" version="1">MESFTLTRRDMAHLLLAMEGRSDLQPLAVLQDAWRRTHSHLARSGSTMPTFLYTEVTPVLDKIIKGKHSAAFSLQEIVSLGQLVEYSHVSLASMQNWVKRDFKEFLGAPKIGKKYSVNQAAILLIVEDLKSCLDFESIRQLFHILFQQPEDDTDDLIQPVDLYAAYSTLFEELDANGDQLLDVTGAGYVKDNGNSATGQKRQEAATEELLVQAADQYTCRLEHLTPNQCEAVRNTLLVAAVSVQNSYFLSMARRYVNATLFLDFQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAE7</accession>
    <name>E3EAE7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yclQ</name>
        <name evidence="3" type="ORF">PPSC2_21650</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373132.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08845"/>
    <dbReference type="EnsemblBacteria" id="ADO58565">
        <property type="protein sequence ID" value="ADO58565"/>
        <property type="gene ID" value="PPSC2_21650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4603"/>
    <dbReference type="eggNOG" id="COG4607">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_3_1_9"/>
    <dbReference type="OMA" id="KMSAFGP"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006826">
        <property type="term" value="P:iron ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01140">
        <property type="entry name" value="FatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033870">
        <property type="entry name" value="FatB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168988" evidence="1">
        <location>
            <begin position="28"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="2">
        <location>
            <begin position="65"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="35321" checksum="3476B14BFB45BA9B" modified="2011-01-11" version="1">MKKNLMFLTLMLALVLIVSACGKAAPATQEATGDGSSTATTESKTVSVKHALDENPVQVKVNPKNVVVFDFGSLDTLDKLGVDVAAVAQQDLPTYLNKYKDSKYASAGTLFEPDYEKISDLSPELIIIGGRQADAYKELSKIAPTISMAVDTKDYINSFKKNVETLGQIFDKEEAAKQELAAIDSSIKAVHDKAVASKAKGLIVLTNEGSLSAYGSQSRFGIIHDAFGVTPVDPGIKVSTHGQKVSFEYVQQKNPDYIFVVDRGAVVVEEGKEQVTGKQTIENELVKKTNAYKNGHIVYLDPNYWYLSGNGLESVSEMIKEIDAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB26</accession>
    <name>E3EB26_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-dependent RNA helicase DbpA</fullName>
            <ecNumber evidence="5">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">dbpA</name>
        <name evidence="11" type="synonym">deaD5</name>
        <name evidence="11" type="ORF">PPSC2_25115</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="5">Contains an N-terminal domain that binds non-specifically to RNA and a C-terminal domain that binds specifically and tightly to hairpin 92 of 23S rRNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the DEAD box helicase family. DbpA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373839.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12610"/>
    <dbReference type="EnsemblBacteria" id="ADO59306">
        <property type="protein sequence ID" value="ADO59306"/>
        <property type="gene ID" value="PPSC2_25115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5323"/>
    <dbReference type="eggNOG" id="COG0513">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003041_21_1_9"/>
    <dbReference type="OMA" id="YDIELYQ"/>
    <dbReference type="OrthoDB" id="626183at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034458">
        <property type="term" value="F:3'-5' RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00965">
        <property type="entry name" value="DEAD_helicase_DbpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005580">
        <property type="entry name" value="DbpA/CsdA_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028619">
        <property type="entry name" value="DEAD_helicase_DbpA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03880">
        <property type="entry name" value="DbpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 5 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Q_MOTIF" evidence="10">
        <location>
            <begin position="4"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="8">
        <location>
            <begin position="35"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="9">
        <location>
            <begin position="231"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="region of interest" description="Involved in 23S rRNA binding" evidence="5">
        <location>
            <begin position="406"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="6">
        <location>
            <begin position="4"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="481" mass="53948" checksum="E0D9427D1DAF0AEA" modified="2011-01-11" version="1">MSQKHFADYPLSEEIVRALNSLGYETPTEIQTEVIPVALEKKDLVAKSQTGSGKTAAYGIPLCELVDWNENKPQALILTPTRELALQVTEDITNIGRFKRIKATPLYGKHPFHIQKAELKQRTHVAVGTPGRVLDHIERGTLSLNRIAYLVIDEADEMLNMGFIEQVQSIIQALPNDRVTMLFSATFPEDVAKLSRKYMNDPVEIEIKATGVTTATIDHSLIQVREADKLALLQDLLVVENPDSCIIFCRTQEHVDTLFRALADLEYPCDRIHGGMEQDERFEVMNAFRRGQFRYLIATDVAARGIDITNITHVINYDIPLEKESYVHRTGRTGRAGKTGKAITLITPKDSKRLADIEAYIGFAIPQVKAPSEEAVDLHREDFERKLHVKTALKNDKREQLNQQIMKLNFNGGKKKKLRAVDFVGTIAKLDGVTADDIGIITILDNVTDVEILNGKGPLVLEIMKNTTVKGKLLKVRKGHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB94</accession>
    <name>E3EB94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LuxR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yvqC</name>
        <name evidence="7" type="ORF">PPSC2_20910</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372995.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08140"/>
    <dbReference type="EnsemblBacteria" id="ADO58426">
        <property type="protein sequence ID" value="ADO58426"/>
        <property type="gene ID" value="PPSC2_20910"/>
    </dbReference>
    <dbReference type="GeneID" id="66575880"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4460"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_90_10_9"/>
    <dbReference type="OMA" id="NVLRKTQ"/>
    <dbReference type="OrthoDB" id="1687028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="8"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="5">
        <location>
            <begin position="148"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="23676" checksum="B1BBCC438E92E4EC" modified="2011-01-11" version="1">METELPISVLLVDDHEMVRIGLAAVLGTEEGIEVVGEAGSGEEGIRLASEYKPNVILMDLVMDGMDGIETTRQVTRLLPETKVIVLTSYLDDEKMYPVIEAGAFSYLLKTSRASEIADAIRAAARGQSVLESQVASKMMNRFRQPQAEAPAHTELTDREMEVLRLLAQGKSNQDIADELIIGIKTVKFHVTNLLAKLGVEDRTQAAIYAYKNGLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBA3</accession>
    <name>E3EBA3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrogen fixation protein NifU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nifU3</name>
        <name evidence="2" type="ORF">PPSC2_20955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373004.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08185"/>
    <dbReference type="EnsemblBacteria" id="ADO58435">
        <property type="protein sequence ID" value="ADO58435"/>
        <property type="gene ID" value="PPSC2_20955"/>
    </dbReference>
    <dbReference type="GeneID" id="66575871"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4469"/>
    <dbReference type="eggNOG" id="COG0694">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060555_4_3_9"/>
    <dbReference type="OMA" id="LGNCDGC"/>
    <dbReference type="OrthoDB" id="2010888at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001075">
        <property type="entry name" value="NIF_FeS_clus_asmbl_NifU_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01106">
        <property type="entry name" value="NifU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NifU" evidence="1">
        <location>
            <begin position="11"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="8689" checksum="15A4762A36E96CDD" modified="2011-01-11" version="1">MDENGVLFDEVSEVLLKLRPFLLRDGGDAELVEVENGIAKLRFLGACNGCPSATITLKVAIERAILEEIDDIKEVVQVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBC5</accession>
    <name>E3EBC5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_21140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373026.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08370"/>
    <dbReference type="EnsemblBacteria" id="ADO58457">
        <property type="protein sequence ID" value="ADO58457"/>
        <property type="gene ID" value="PPSC2_21140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4494"/>
    <dbReference type="eggNOG" id="COG0526">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114536_1_0_9"/>
    <dbReference type="OMA" id="ILMADWC"/>
    <dbReference type="OrthoDB" id="1630944at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="21599" checksum="C62F3084FA1F5D38" modified="2011-01-11" version="1">MSRTNVSQYFGKGLSPEQFMEGMEKNKEAFRSGYDQFVWSSEEDREFFESLNHRDDLRVLILAADWCGDVVRNVPVVFRALENSGIPTEVLILENHQALMDDFLTMGGRAVPIVIFADTGGHVLGHWGPRPAHVQQIMIEFKRENPDREADDYQEKIAVARKEMAEKYGEGTEVHPVIVQELRELISGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF4</accession>
    <name>E3EBF4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Arsenical pump membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">arsB3</name>
        <name evidence="9" type="ORF">PPSC2_21950</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in arsenical resistance. Thought to form the channel of an arsenite pump.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the ArsB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58628.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886059.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09100"/>
    <dbReference type="EnsemblBacteria" id="ADO58628">
        <property type="protein sequence ID" value="ADO58628"/>
        <property type="gene ID" value="PPSC2_21950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4670"/>
    <dbReference type="eggNOG" id="COG1055">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043931_1_0_9"/>
    <dbReference type="OrthoDB" id="626718at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015105">
        <property type="term" value="F:arsenite transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046685">
        <property type="term" value="P:response to arsenic-containing substance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01118">
        <property type="entry name" value="ArsB_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000802">
        <property type="entry name" value="Arsenical_pump_ArsB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02040">
        <property type="entry name" value="ArsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00758">
        <property type="entry name" value="ARSENICPUMP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00935">
        <property type="entry name" value="2a45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0059">Arsenical resistance</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="26"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="96"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="137"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="181"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="224"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="276"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="317"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="402"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58628.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="429" mass="46806" checksum="06ED8EE2990EAF4B" modified="2015-05-27" version="2">MIFLACIIFLVTLVLVIWQPKHLSIGWSACGGAILALLVGVVDLHDVWEVTRMVWNATLAFVAIILISLVLDKIGFFEWAALHMARLARGSGTRMFVYVSLLGAVVAAFFANDGAALILTPIVLAMVRALKLDEKMVFPFIIASGFIADTTSLPLVVSNLVNIVSADFFGISFMEYASRMIVPNLFSLAASIVVLYLFFRKKIPKTFDATQLITPANAIKDPKMFRMSWVVLTILLVGYFACEFFDIPVSVVAGIIAILFLLMARRSPVVPMKEVIKGAPWAIVFFSIGMYVVVYGLRNAGLTDLLSHVIQAAADQGMFVATMAMGFIAAIISSSMNNLPTVMIDALAINATHATSMVKEALIYANVIGSDLGPKITPIGSLATLLWLHVLRSKNVKISWGTYFKTGIVLTIPTLFITLLGLYLWLIIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBG4</accession>
    <name>E3EBG4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybfA5</name>
        <name evidence="2" type="ORF">PPSC2_21995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373204.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09145"/>
    <dbReference type="EnsemblBacteria" id="ADO58638">
        <property type="protein sequence ID" value="ADO58638"/>
        <property type="gene ID" value="PPSC2_21995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4678"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_28_1_9"/>
    <dbReference type="OMA" id="MLFHINL"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="17691" checksum="AF47BD807042D831" modified="2011-01-11" version="1">MVNIDANIIADMRRFNRFYTNLLGVLDRHVLDSGYSFTEARVIIEIGLIEPCIANTLVESLKIDRSYMSRIIAKFCKEGFLVKENSTVDNRTNLIRLTPKGKTFYNQLNERSDEQILRLVQGLSEIEIEELHASMLLIQKKLDISERIQNDTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBJ7</accession>
    <name>E3EBJ7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Diadenylate cyclase</fullName>
            <shortName evidence="10">DAC</shortName>
            <ecNumber evidence="10">2.7.7.85</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Cyclic-di-AMP synthase</fullName>
            <shortName evidence="10">c-di-AMP synthase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ybbP</name>
        <name evidence="10" type="synonym">dacA</name>
        <name evidence="12" type="ORF">PPSC2_22130</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>2 ATP = 3',3'-c-di-AMP + 2 diphosphate</text>
            <dbReference type="Rhea" id="RHEA:35655"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:71500"/>
            <dbReference type="EC" id="2.7.7.85"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="10">Probably a homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the adenylate cyclase family. DacA/CdaA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.85" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373237.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09620"/>
    <dbReference type="EnsemblBacteria" id="ADO58671">
        <property type="protein sequence ID" value="ADO58671"/>
        <property type="gene ID" value="PPSC2_22130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4711"/>
    <dbReference type="eggNOG" id="COG1624">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038561_0_1_9"/>
    <dbReference type="OMA" id="ILWQGEL"/>
    <dbReference type="OrthoDB" id="1300262at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106408">
        <property type="term" value="F:diadenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006171">
        <property type="term" value="P:cAMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019932">
        <property type="term" value="P:second-messenger-mediated signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01499">
        <property type="entry name" value="DacA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014046">
        <property type="entry name" value="C-di-AMP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034701">
        <property type="entry name" value="CdaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045585">
        <property type="entry name" value="CdaA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036888">
        <property type="entry name" value="DNA_integrity_DisA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003390">
        <property type="entry name" value="DNA_integrity_scan_DisA_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19293">
        <property type="entry name" value="CdaA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02457">
        <property type="entry name" value="DAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004793">
        <property type="entry name" value="UCP004793"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143597">
        <property type="entry name" value="SSF143597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00159">
        <property type="entry name" value="TIGR00159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51794">
        <property type="entry name" value="DAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="17"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="67"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="DAC" evidence="11">
        <location>
            <begin position="84"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="31299" checksum="2EF76C1CC1DACFB4" modified="2011-01-11" version="1">MLDYFADLTWKESIKDIIDILIVTYIMYQLILLVRGTRAVQLLKGILFLVVIWAVSTWFDLYTLKWLMNQMFTFGVVAIFIIFQPELRRALEQLGRGKLFGRSSVDDEEINKLIGEMIKALNYLSRRKIGALVVFERETGLNEYTESGIKTQAVVSSELLINIFIPNTPLHDGAVIIQNKQIASAACYLPLSENPFISKELGTRHRAAIGVSEVTDAVTVVVSEETGQISLAINGQVVRDIKEESLISKLYEELRPTPSLKEKRGSFWNRRGGRGNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBL1</accession>
    <name>E3EBL1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Peptide chain release factor 2</fullName>
            <shortName evidence="6">RF-2</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">prfB</name>
        <name evidence="9" type="ORF">PPSC2_22945</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="6">Methylated by PrmC. Methylation increases the termination efficiency of RF2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58829.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10420"/>
    <dbReference type="EnsemblBacteria" id="ADO58829">
        <property type="protein sequence ID" value="ADO58829"/>
        <property type="gene ID" value="PPSC2_22945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4859"/>
    <dbReference type="eggNOG" id="COG1186">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036856_6_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00094">
        <property type="entry name" value="Rel_fac_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005139">
        <property type="entry name" value="PCRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004374">
        <property type="entry name" value="PrfB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03462">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00937">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="SSF75620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00020">
        <property type="entry name" value="prfB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0488">Methylation</keyword>
    <keyword evidence="5 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RF_PROK_I" evidence="8">
        <location>
            <begin position="205"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="30"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="modified residue" description="N5-methylglutamine" evidence="6">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58829.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="331" mass="37365" checksum="BAC8236F4856A6BC" modified="2015-05-27" version="2">MAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEEEGDEALVGEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWGEKRGFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEIADDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVVTCQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDPFIDGYLRSQIKLDAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX7</accession>
    <name>E3EBX7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_24200</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373636.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11725"/>
    <dbReference type="EnsemblBacteria" id="ADO59101">
        <property type="protein sequence ID" value="ADO59101"/>
        <property type="gene ID" value="PPSC2_24200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5124"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049575_0_0_9"/>
    <dbReference type="OMA" id="KIRMNTE"/>
    <dbReference type="OrthoDB" id="480174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006061">
        <property type="entry name" value="SBP_1_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01037">
        <property type="entry name" value="SBP_BACTERIAL_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169054" evidence="4">
        <location>
            <begin position="34"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="439" mass="48375" checksum="FAF8BDE06421C213" modified="2011-01-11" version="1">MKLSKVLMSLLSVLLIAGLFTGCSSKRDTPAAGSDPKGPEGEITVITQRTDIVDTVFQDYAKEFNKLYPNVKVNFQALADYDGQIKIRMGTRDYGDVLLIPGSIPIEELPNFFEPLGTYDEMKNKYTGIEERTVDGNSYGIPIAMVYSGVIYNKKVFKEAGITQIPKTPDQFLKALQQIKDKTKAVPLFTNYASGWALTQWESSLATVAGTKEYVNVTQPNSDDNFTKGQPHYELYKVLYDAAKNGLIEKDPTTTDWETSKADLAQGKIGTMVLGSWAIDQIKSVASNKDDIGFMPFPTNASKVLVPLAGDFNLAINVNSENKEAARAWVDWFTEKSNYAVEQAGSISPLKGAAMPAILKQYENEGVAFEALTPSPKGQEGIVDKIDKMGEIGLWQPDFKKRIIEAAVGNRPESYDTIMKDLNDAWVKARAEVAAKEAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECA8</accession>
    <name>E3ECA8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gntR1</name>
        <name evidence="2" type="ORF">PPSC2_01315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368893.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14035"/>
    <dbReference type="EnsemblBacteria" id="ADO54251">
        <property type="protein sequence ID" value="ADO54251"/>
        <property type="gene ID" value="PPSC2_01315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.259"/>
    <dbReference type="eggNOG" id="COG2188">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063236_5_0_9"/>
    <dbReference type="OMA" id="FMIETGY"/>
    <dbReference type="OrthoDB" id="1775418at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="3"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="240" mass="28002" checksum="79CB37F9909DDB1E" modified="2011-01-11" version="1">MTQFVYKQIIDDLKMKIFAGKFADMRLPDERSLSETYQVSRSSIKRALTKMESVGIIFKKQGSGTFINPLYIRNESIFNYEGSNLGVTDNFQMHGKKPKIKVLSFEVIPPTEELQRDLFLDTHDFVYKIVRLRLFDDDPFMIETGYIPIKIVQDLNQTIIEGSIFNYLEDSRNLAVTKSFLSIFAEPSQENDQKLLQLKENEPVGIMEGVFFLDNGTPFEFSHMRFHYKYLKFNTFVSVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECG0</accession>
    <name>E3ECG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tar3</name>
        <name evidence="4" type="ORF">PPSC2_01575</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368945.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14270"/>
    <dbReference type="EnsemblBacteria" id="ADO54303">
        <property type="protein sequence ID" value="ADO54303"/>
        <property type="gene ID" value="PPSC2_01575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.313"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_26_9"/>
    <dbReference type="OMA" id="SEGLWDM"/>
    <dbReference type="OrthoDB" id="429006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAC" evidence="3">
        <location>
            <begin position="150"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="3">
        <location>
            <begin position="289"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="2">
        <location>
            <begin position="333"/>
            <end position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="503" mass="56595" checksum="431D0C00204E140E" modified="2011-01-11" version="1">MFLKKNESQSLAPLVEESRKLSQRIQQKDYAAAIQVPSASPEVQEIANNVNQAIESMKNDAQHVDIRLKLVTKAIEIGLWDMEVIAGDPVNPNNTFTWSEEFRSMLGYQSEKEFPNVLDSWSSRLHPEDYDRSLAELSDHLLDFTGKTPYDVQYRLKLKHGEYRWFRATGTTIRDEKGVPLRIAGALLDVHDQKIKSEELQALVTRYDLINLVLVEAPYDVNIIGGDIENPDNTFWWSPQFRETLGFKDEQDFPSKLSSWASILYPEDAEMAIKVLNDHLNDYTGRTPYEMECRLVRKNGEHRWYYCSGKTLRDSKGVPIRIAGTIRDITVEKEKQAVADELTLKIQHLSDSITEMVNGVNSVSNQAQELATAQEQSTEAANQAKVSAEETQNISNFIKEIANQTNLLGLNAAIEASRAGEQGRGFAVVADEVRKLAIHSADATGNIETSLDEMKTLIERILHNIGNMSTLTQTQAALTQQVNASTDEINSMSKALLDFARTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECM1</accession>
    <name>E3ECM1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">UV damage repair endonuclease UvdE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">uvsE</name>
        <name evidence="8" type="ORF">PPSC2_04015</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369428.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16815"/>
    <dbReference type="EnsemblBacteria" id="ADO54793">
        <property type="protein sequence ID" value="ADO54793"/>
        <property type="gene ID" value="PPSC2_04015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.800"/>
    <dbReference type="eggNOG" id="COG4294">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017168_0_1_9"/>
    <dbReference type="OMA" id="NIRFMRI"/>
    <dbReference type="OrthoDB" id="1036440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009411">
        <property type="term" value="P:response to UV"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004601">
        <property type="entry name" value="UvdE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31290">
        <property type="entry name" value="PTHR31290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03851">
        <property type="entry name" value="UvdE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00629">
        <property type="entry name" value="uvde"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0228">DNA excision</keyword>
    <keyword evidence="6" id="KW-0234">DNA repair</keyword>
    <keyword evidence="2 8" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="243"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="333" mass="37242" checksum="8DCE01801465B3AC" modified="2011-01-11" version="1">MIVRFGYVAMSVTVQNASPSKTMTMASFNKIGDREAAIRKLERIAAENLHNTLRLLRHNRASDIQVYRFSSKLIPLATHQDLRDWDPFEALAADFAEVGDYVKANKMRVSFHPDHFTVLSTPRPEVLQSSINDLKYHVAMLEAMGLGAEAKNNIHIGGAYGDKVTSGQRFVEQVNALDLSLRQRLTLENDDKTFNAVETLEACKITGLPMVLDIHHQWVNNEGEKPWELWPDILDTWKGELAQAGSSTDHPLPPKIHASSPKSEKDPRGHADGVLVEPLLTFLRNIAGYTDRIDVMLEAKLKDEALFGLMNELRLQEDNGVKVLDGASIEITP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECN0</accession>
    <name>E3ECN0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rhamnogalacturonyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_04060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369437.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16860"/>
    <dbReference type="CAZy" id="GH105">
        <property type="family name" value="Glycoside Hydrolase Family 105"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54802">
        <property type="protein sequence ID" value="ADO54802"/>
        <property type="gene ID" value="PPSC2_04060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.809"/>
    <dbReference type="eggNOG" id="COG4225">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043688_0_0_9"/>
    <dbReference type="OMA" id="WAEWAMY"/>
    <dbReference type="OrthoDB" id="982403at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010905">
        <property type="entry name" value="Glyco_hydro_88"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07470">
        <property type="entry name" value="Glyco_hydro_88"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="344" mass="39048" checksum="B121DEE01453EE7A" modified="2011-01-11" version="1">MPALSFDEEQIKQVIDRVVERTFQMHYSWDWPGGVAFYGVCEAYEATGNEKYLTKLKEWVDENIEDGLPPLSVNGVSVGHCLLTLHQATDEQKYLDIAIEMAEFLIKKAERFADGIFQHTVNSLHDVFPQQAWVDTMFMAGYYLLRIGHLLGNKTYWEDGIRQYHGHEEFLQDPDTNLYYHGWDHANQSRMSGIYWARGNSWAALTMAKALKCVEVQHPSYMIIDGSLRDQLNALVRLQSPEGLWHTVLNDDTSYLETSGSAGIATAFLMQGRLFNKYTQKAIDGILSRIKEDGTVTGVSAGTAVMNDIDGYRNVPYKRIQGWGQGLTLAFLAQLLRTKENPYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS9</accession>
    <name>E3ECS9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">srrA1</name>
        <name evidence="2" type="ORF">PPSC2_01900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369013.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14665"/>
    <dbReference type="EnsemblBacteria" id="ADO54373">
        <property type="protein sequence ID" value="ADO54373"/>
        <property type="gene ID" value="PPSC2_01900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.382"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_10_2_9"/>
    <dbReference type="OMA" id="AAFQYWV"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168829" evidence="1">
        <location>
            <begin position="30"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="424" mass="46298" checksum="F0F6243CCAE4D2B5" modified="2011-01-11" version="1">MTKKAKGRLRLLVSMLALVVLLSGCGGGGSKPEKVDGGKVTLQFWTIALQPTFTPYFNRVIADYEQKNPNVKIDWKDYPYDAVTNKLLTSIASNSSPDVVNLNTEFASQMGSKGAVVDMNEHLSPEEKAAYFEGIYNSTVINGKAYALPWYTGTEVLYMNTKLVKAAGLDPAHPPKTRGELSEWGRQINRKIGKAGYAQQLVSKLFAVDGIPILNKEKTAAAFNTPDAVTMIDNLKKQMEDGVVLKEDADFSQQVKYYASEQVAFELAGPTFINFIKTAAPDVYKNTIAVPVPTGKADVRLSNSMDLVVPTKSAHIDEAVKFAVFLTNAESQTAFSKEANTLPSTKESIKDSYFTQSDQSLEAQAKVVSAQSLDKATDYMVGVPNAKDVNSAIARALQNILLNGRDTKETLTALEQEVNDILKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECZ2</accession>
    <name>E3ECZ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvbA</name>
        <name evidence="2" type="ORF">PPSC2_04340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54861.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17150"/>
    <dbReference type="EnsemblBacteria" id="ADO54861">
        <property type="protein sequence ID" value="ADO54861"/>
        <property type="gene ID" value="PPSC2_04340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.865"/>
    <dbReference type="eggNOG" id="COG0640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097806_3_4_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54861.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10410" checksum="B5D35A85E04F031B" modified="2015-05-27" version="2">MLNDAFKALADPTRRTILQLLKEKSMSAGEVAEHFQISKPSISHHLNILKQAGLVLDERQGQNIIYTLHTTVVADVIGWMFSIAHSDTPDEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED64</accession>
    <name>E3ED64_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">M1-573</name>
        <name evidence="12" type="ORF">PPSC2_02260</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369061.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0437"/>
    <dbReference type="EnsemblBacteria" id="ADO54421">
        <property type="protein sequence ID" value="ADO54421"/>
        <property type="gene ID" value="PPSC2_02260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.429"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3706">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011115_1_0_9"/>
    <dbReference type="OMA" id="ENIETHN"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011623">
        <property type="entry name" value="7TMR_DISM_rcpt_extracell_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07695">
        <property type="entry name" value="7TMR-DISM_7TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="239"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="268"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="301"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="325"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="358"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="431"/>
            <end position="649"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="11">
        <location>
            <begin position="691"/>
            <end position="809"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="920"/>
            <end position="1019"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="8">
        <location>
            <position position="742"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1020" mass="114324" checksum="4B519251F928889D" modified="2011-01-11" version="1">MNKRNFFLITLSFLIVIIGLRLLWFDYYHNQDYPRAKAGILDLRGLNLQEIKTLPLNGEWEFYPGTLSSPAELKSLLMQKQRQTIQVPGLWSESVSPVDHKAYGVGTYRLLILSDRSEDTLYGLRIGKISTASNIFVNGRLISHSGQVSSKVEQHIGTTVPFSAMFDANRQAIEIVIQVSNFDFSASGGIMKPIIFGSADAVNSRTNFTIAMQIMVCIILLLHGLYIVVIFFMNPQKKALLYFAGIVICTVLSILTDDDKLLLDWFPINLGLSLKITTLSYIGIGMCVLKLAQSLLVRSRIIQIVFIGHCCFAILVLLAPASSLYAFLMVLIALPAITLCATVPSLAFLRTFRGQKEAVFLLLASISIASSMLWGIFKTNDLPYYPWDIVLAFVAFASYWFKRFFNTNAELRRLSDRLQRADQVKNEFLANTSHELRNPLHGMINIAQTVLENQGSALDEPNRRNMQLLVTVGRRMSLLLNDLLDVTRLREKDIILEKRSLKPKAVASGVLDMLQFMTDGKPLNMVVNIPADFPNVLADENRVIQILFNLLHNAVKHTAEGTISVHAHIQGEMASIQVRDTGVGIDEETQKRIFHPYEQGNSHLTVIGDGLGLGLSISKQLVELHGGSLSVSSELGQGSTFSFTLPLDPSPTPDESRDNEQVCMDEEAGTDFIALQNEAVMQVAAGSARSAILAVDDDPVNLRVLEGILASESEPYELVTVTSAQDALHRLDHREWDLIIADVMMPQMSGYELTRRVREYFSISELPVLLLTARSQQEDLYTGFLAGANDYIMKPVDSMELKSRVRALTDVKKSARERLWMEAAWLQAQIKPHFLFNTLNTIASLSHVDHTRMVNLIEEFGKYLRSSFNPQNLDRVVSLEYELALLKSYLYIEKERFGNRLDIVWEVDEQISLLLPPLSIQPLAENAIRHGIMNRIHGGTLCIRIQQREDGTEIAIIDDGVGMSQEELDRLLSHHQEQDSGIGLRNTNRRLKQVYGKGLSISSLPNQGTTVSFHVPQVQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDH8</accession>
    <name>E3EDH8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ddhD</name>
        <name evidence="3" type="ORF">PPSC2_04775</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369590.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17670"/>
    <dbReference type="EnsemblBacteria" id="ADO54957">
        <property type="protein sequence ID" value="ADO54957"/>
        <property type="gene ID" value="PPSC2_04775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.960"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_7_2_9"/>
    <dbReference type="OMA" id="NVRWGIM"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="136"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="36405" checksum="8DDA87105F932DE0" modified="2011-01-11" version="1">MSKKIKWGIVGTGWISDQFVADLQHVTNGEGYAVGSRNIESATEFATKHHIAQAYGSYEELVQDSEVDAIYIGTPHPFHKENVLAALRAGKAVLCEKPFTVNSKELEELISYARDHKLFLMEAMWTRFLPPIRQVRKWIHEGRIGEVKLVKAEFGFRVDWNPEGRLLNPELGGGALLDAGIYPVSFASMVFGPEPEHVWSTAHIGETGVDETFSIMLDYGKGRTAMLNGAVRLGLTNEAYIHGTKGYIHIPSFLNSTSATLVVDGEEAQNFQDDRSSTGYAFEAEEVGRCLNEGLLESSTISLDESLGIMKLMDQIRSQWGLRYPFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDZ8</accession>
    <name>E3EDZ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydhT1</name>
        <name evidence="7" type="ORF">PPSC2_02615</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 26 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369118.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16435"/>
    <dbReference type="CAZy" id="GH26">
        <property type="family name" value="Glycoside Hydrolase Family 26"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54478">
        <property type="protein sequence ID" value="ADO54478"/>
        <property type="gene ID" value="PPSC2_02615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.487"/>
    <dbReference type="eggNOG" id="COG4124">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041638_0_0_9"/>
    <dbReference type="OMA" id="PRNNDNG"/>
    <dbReference type="OrthoDB" id="669354at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016985">
        <property type="term" value="F:mannan endo-1,4-beta-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006080">
        <property type="term" value="P:substituted mannan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022790">
        <property type="entry name" value="GH26_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000805">
        <property type="entry name" value="Glyco_hydro_26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40079">
        <property type="entry name" value="PTHR40079"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02156">
        <property type="entry name" value="Glyco_hydro_26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00739">
        <property type="entry name" value="GLHYDRLASE26"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51764">
        <property type="entry name" value="GH26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169133" evidence="5">
        <location>
            <begin position="30"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="domain" description="GH26" evidence="6">
        <location>
            <begin position="5"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="320" mass="35037" checksum="2C32C4819B4011C4" modified="2011-01-11" version="1">MNSFKKTKSLISALTGAALLFSLPITAGAESNINYTGMFLGYDGSVNTSPVWTYNPDIVSYDLLNWNQGGTDAASITSNSASVIQDLGKIVTVSTHMPNPQGGNVNAPMSDSDFNILANTDISSINSSSPAWLQNYKAQVDNVVTGLQKFNSSPVYYRPFHEMNGGWFWWGNKNTTDYKNLYINLYNYIVTTNGMSNVNFVYAPNKGANAAAYYPGSSYVTWIGIDAYSDDPSNDNEIKVAYNDIKGLGKTYGFCEIGPAVGGDHVDRNNNQLKEFDYSLWNNALNEVYTGASFFITWDGAYAPQNNTNGSVLFTKESSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA1</accession>
    <name>E3EEA1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Alpha-galactosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">melA5</name>
        <name evidence="8" type="ORF">PPSC2_05095</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
        <text evidence="6">Binds 1 NAD(+) per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the glycosyl hydrolase 4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55024.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886092.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17945"/>
    <dbReference type="CAZy" id="GH4">
        <property type="family name" value="Glycoside Hydrolase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55024">
        <property type="protein sequence ID" value="ADO55024"/>
        <property type="gene ID" value="PPSC2_05095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1032"/>
    <dbReference type="eggNOG" id="COG1486">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045951_1_1_9"/>
    <dbReference type="OrthoDB" id="277080at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019802">
        <property type="entry name" value="GlycHydrolase_4_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001088">
        <property type="entry name" value="Glyco_hydro_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022616">
        <property type="entry name" value="Glyco_hydro_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32092">
        <property type="entry name" value="PTHR32092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02056">
        <property type="entry name" value="Glyco_hydro_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11975">
        <property type="entry name" value="Glyco_hydro_4C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00732">
        <property type="entry name" value="GLHYDRLASE4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="SSF56327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01324">
        <property type="entry name" value="GLYCOSYL_HYDROL_F4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0464">Manganese</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_4C" evidence="7">
        <location>
            <begin position="194"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF11975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55024.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="432" mass="48346" checksum="6609F97544B9D317" modified="2015-05-27" version="2">MSKITFLGAGSTVFAKNVLGDCMLTPALQGFELALFDIDPVRLKDSENILSNLKKTTGSTCVIRSYTDRKEALRGAAYVVNAIQVGGYDPCTITDFEIPKKYGLRQTIADTVGIGGIFRNLRTIPVMLDFAADMREVCPDALFLNYTNPMAVLTNVMNVHGGVRTVGLCHSVQACIPELFKSLGLEREGVKAKIAGINHMAWLLKVSKDGVDLYPEIKKRAAARQREKHHDMVRFEMMLKFGYYITESSEHNAEYHPYFIKRAYPELIERFNIPLDEYPRRCVSQIERWETMREELLGDQDLRHERSNEYASYIFEAIETNQPFAIGGNVMNTGLITNLPKEACVEVPCLVNRNGVTPTFVGDLPPQCAALNRTNINTQLLTIEAAMTGKKEHIYHAAMLDPHTSAELSMDDIVSLCDDLIAAHGTWLPAYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA3</accession>
    <name>E3EEA3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF5704 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_05105</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55026.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885886.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18030"/>
    <dbReference type="EnsemblBacteria" id="ADO55026">
        <property type="protein sequence ID" value="ADO55026"/>
        <property type="gene ID" value="PPSC2_05105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1034"/>
    <dbReference type="eggNOG" id="COG5492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_286484_0_0_9"/>
    <dbReference type="OrthoDB" id="49227at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043759">
        <property type="entry name" value="DUF5704"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18964">
        <property type="entry name" value="DUF5704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169141" description="DUF5704 domain-containing protein" evidence="2">
        <location>
            <begin position="33"/>
            <end position="1099"/>
        </location>
    </feature>
    <feature type="domain" description="DUF5704" evidence="3">
        <location>
            <begin position="354"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="298"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="478"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="132"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="304"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55026.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1099" mass="125084" checksum="9352331DCF1B466F" modified="2015-05-27" version="2">MKKTKHLLIALLVGLLLFFQFPPFSFPTNMVAADTEITPLSYFPDKNNRYFVGMMYFDMWKNTAGEWVTQKKQPNKHMYGEATFTYKFQFPGRKIKSVEASLYEPKINKENLDYKKYFSKSRSDNYEDYRRAISGDSTSNSSKTSNEIRPFQKQGIGTDTTVIPVTVNMLLDAEEPLNIKDESCPTCAKEVEAWRIYQPILFKIELESALIVKHFTTDGKSLNNVFKPIEDELKPNQPYDFTPPTNPKYEYVGYKKSTTGKPPSGDILPGIVPGFTYDGSFEQFTAYLYYKEAQGCPKPGESQEGAPSNCQDNEQPTKGVVCSRPVPGLRLETAELDPVVSAVIKADQRGRERFDVSKGIPTSESLYGHVQAKRYLFQHKFVNMTGQCTYTVNVKREYRLTWRPKKKSRRNETVKRTYTYQIVRPYSYWKIDNLEVYGIKEATLRNYALPNEAITLRPQSYTPPSYIAATQGNFYPLPAPGTVDGGSRSKNGGSSKPSVPDDRSVLKSKAEEAVKEIEVENDTLTFENKIIMNPERVKVNGPKPGVIPSSGAIGADVLYSPNHVIDKHKMNKPNTPSSGDITYAILKGNINGGADKTLPIQGINTVTVHTPVVNLSTVSDDAAHNQKTQPTKGRSALILERPFRVTISTAGPHLNIPGYGDREYAKYVRTKQVRFPFDVYDKGKTHFYPRGTWIDIPVLQLDTDFYLPVWVDEGNYTVEFRTIAENAPDGFTEQHHANTNLAHHVANDVVNIEVIGRMYDFHITDIADYHWERVFRLQKGSPLHSGLSYWTGLGNIDGLPRGNPEPFTLPIRPGSHPFEGYANVAVKTGYHFKFDLKTKGNMFSARDGIRITPSFYWVSKNGRQREEVDLYTHAGSQKFIRVGSAEDREKRYVILNERLRNVPMEEMQNTAAYQYQHGLSEAERSQLTLERYVALYAQRITRSKTWVGRYDWLVLPAAVRTLIGPKTDLPEGVDADRANAAIQRWYGEYSLPADVYAVTKGTDLRNVSRERELNEHTDLFKKTGFIVVRFNLESLRQGDTEHPHLQYINGPLLNQWQLEGYRREIKDPYGHTFHLQDGDIVFYHADQSSRDDFNSFVPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEI0</accession>
    <name>E3EEI0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yju3</name>
        <name evidence="2" type="ORF">PPSC2_06980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370062.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19960"/>
    <dbReference type="EnsemblBacteria" id="ADO55431">
        <property type="protein sequence ID" value="ADO55431"/>
        <property type="gene ID" value="PPSC2_06980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1438"/>
    <dbReference type="eggNOG" id="COG2267">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026209_1_0_9"/>
    <dbReference type="OMA" id="NRTAFDW"/>
    <dbReference type="OrthoDB" id="1694750at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="29"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="37357" checksum="631DBBF67AAD6CEB" modified="2011-01-11" version="1">MREYTFTIAEDDGTELFAYRWLPEPNIPIKGIVQVSHGMCETSYRYIRLAEKLTASGYGVYANDHIGHGRTAGDPDKLGMPGANAFNRMAKGMLELGEIAAKEFPDQSRFLLGHSMGSFLTQKIMYDDQQAYHGFILSGTNGRRSLLKLGEQVALLQAKLQGMDHRSMLLNAMVFGGFNRAFRPVRTAFDWLSRDPEEVDQFVHDPLCGAICTTGFFLDFFRLLQEIHWPSSLKNINPKLPVYIFAGDRDPVGLFGKGVLSLVDMYRSLELQDLEYRLYPDGRHEMLHETNRDEVMSDIVDWLDRHINTGATSVSVGSGASEASALSASPKSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEV4</accession>
    <name>E3EEV4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pyridoxal 5'-phosphate synthase subunit PdxS</fullName>
            <shortName evidence="3">PLP synthase subunit PdxS</shortName>
            <ecNumber evidence="3">4.3.3.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Pdx1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pdxS</name>
        <name evidence="6" type="synonym">yaaD</name>
        <name evidence="6" type="ORF">PPSC2_00450</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>aldehydo-D-ribose 5-phosphate + D-glyceraldehyde 3-phosphate + L-glutamine = H(+) + 3 H2O + L-glutamate + phosphate + pyridoxal 5'-phosphate</text>
            <dbReference type="Rhea" id="RHEA:31507"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58273"/>
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            <dbReference type="ChEBI" id="CHEBI:597326"/>
            <dbReference type="EC" id="4.3.3.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; pyridoxal 5'-phosphate biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">In the presence of PdxT, forms a dodecamer of heterodimers.</text>
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        <text evidence="1 3 4">Belongs to the PdxS/SNZ family.</text>
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        <property type="component" value="Chromosome"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042823">
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="Aldolase_TIM"/>
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        <property type="entry name" value="RibuloseP-bd_barrel"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="TIGR00343"/>
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    </dbReference>
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        <property type="entry name" value="PDXS_SNZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
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        <location>
            <begin position="6"/>
            <end position="211"/>
        </location>
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        <location>
            <begin position="234"/>
            <end position="235"/>
        </location>
    </feature>
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        <location>
            <position position="80"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="23"/>
        </location>
        <ligand>
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        </ligand>
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            <position position="152"/>
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        <ligand>
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        <location>
            <position position="164"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:59776"/>
        </ligand>
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        <location>
            <position position="213"/>
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        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:78346"/>
        </ligand>
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    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01824"/>
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    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00481"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF01680"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO54077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="31581" checksum="9E4F02FD2C5F8040" modified="2011-01-11" version="1">METGTSRVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGATAVMALERVPSDIRAAGGVARMADPTIVEEVMKVVSIPVMAKARIGHFVEAKVLESLGVDYLDESEVLTPADEVFHIDKREFTVPFVCGAKDLGEALRRIGEGASMIRTKGEPGTGNIVEAVRHMRFINGQIRKVQNLSKDELYAEAKNLGVAYELLLEVHELGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKSDSPEKFARAIVEATTHYTDYKLIAEVSKNLGTPMKGIEISKLASHERMQDRGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF68</accession>
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            <fullName evidence="3">M1-737</fullName>
        </submittedName>
    </protein>
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        <name evidence="3" type="primary">M1-737</name>
        <name evidence="3" type="ORF">PPSC2_03105</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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            <begin position="164"/>
            <end position="193"/>
        </location>
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        <location>
            <begin position="58"/>
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        </location>
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        <location>
            <begin position="202"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="281" mass="32421" checksum="C250033730ADB021" modified="2011-01-11" version="1">MKLIQRIKEGANRATEKAQHAVEISKINSQITTIQQEMDVHFLRMGQIFYEGYRASDMSVAETEMTQLSTACDELQDEIDELRSRIAELKNAHLCTCGAVVPLDANFCPKCGRKLNGGQAASKQVAAVREEVPTDAYSFDLRKPEAAKDAVPAYMEYAEDEVIDRHEQDERYETHDPTESDRNYTVSDFTPEEKAAFDEEWERRRQEELEKEHHRLEELERERERQEELDERIRYWKANNSGAEKPATASMQIRENVKCQICTAELPKGSKWCPRCGAEQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF90</accession>
    <name>E3EF90_PAEPS</name>
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        <submittedName>
            <fullName evidence="5">ABC transporter</fullName>
        </submittedName>
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        <name evidence="5" type="ORF">PPSC2_05235</name>
    </gene>
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    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO55053">
        <property type="protein sequence ID" value="ADO55053"/>
        <property type="gene ID" value="PPSC2_05235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05235"/>
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    <dbReference type="eggNOG" id="COG1131">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
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    <dbReference type="OrthoDB" id="1179151at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
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        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
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        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="34549" checksum="D3967C01DB08FC28" modified="2011-01-11" version="1">MIELREVTKTFTEEKAVDQLALTVKKGSIFGLLGSNGAGKTTLLKIIAGIYRPDTGKVLIGGQPVYEQPEVKQHILFLPDTPYFFPQATIRQMARFYRSIYPSWSEERYTQLTDIFKLDPKRKLHRFSKGMKRQAAFLLALSCMPELLVLDEPIDGLDPVMRRMIKNLLFQETAAREMTVVISSHNLREIEDMCDHVGIMHQGRMLLEKEVDDLKSDTHKVQVAFRDSMHEEAVCSQLSVVHKERRGSVLLLIIRGERERIAETIEVYEPHVFDLLPLTLEEIFIYEMEDAGYDIQPILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFA0</accession>
    <name>E3EFA0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Galactokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">galK1</name>
        <name evidence="7" type="ORF">PPSC2_05285</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369696.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18200"/>
    <dbReference type="EnsemblBacteria" id="ADO55063">
        <property type="protein sequence ID" value="ADO55063"/>
        <property type="gene ID" value="PPSC2_05285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1071"/>
    <dbReference type="eggNOG" id="COG0153">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017814_8_0_9"/>
    <dbReference type="OMA" id="SSWKWLQ"/>
    <dbReference type="OrthoDB" id="1388391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004335">
        <property type="term" value="F:galactokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000705">
        <property type="entry name" value="Galactokinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019539">
        <property type="entry name" value="GalKase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006204">
        <property type="entry name" value="GHMP_kinase_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006206">
        <property type="entry name" value="Mevalonate/galactokinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10457:SF6">
        <property type="entry name" value="PTHR10457:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10509">
        <property type="entry name" value="GalKase_gal_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00288">
        <property type="entry name" value="GHMP_kinases_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000530">
        <property type="entry name" value="Galactokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00473">
        <property type="entry name" value="GALCTOKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GalKase_gal_bdg" evidence="6">
        <location>
            <begin position="37"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP_kinases_N" evidence="5">
        <location>
            <begin position="143"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF10509"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="436" mass="48139" checksum="6D1B40246E8BB4D7" modified="2011-01-11" version="1">MKDMELLNSSEGQIVLARMYGQQQISEQTSRYQSLIQAYQEHFGVGDIELFSAPGRCEIGGNHTDHNHGKVLAGSITLDTIAVAAKVEESVITFFSEGYKTKYVIDLNDLAPKPEDDGTMLLIRGIAAGLLEFGYRIGGFQAYISSNVFSASGLSSSASFEMLICTILNHFYNEGALDTVAKSKIGQYAENVYWNKPSGLLDQMACAYGGLISIDFENPKEPIINPVHWNFEQNGYSLVIVNTGGNHADLTDDYAAVPNEMRAVAQSLGASVCRDLSPENLYDNLKMVREKAGDRAVLRALHFFEENKRVDEQVKSLEEGRFSDFLKLITESGNSSWKWLQNVYRSGIDREQDVSVALALTEMYLKSIDNSACRVHGGGFAGVILTILPNDHVDDYKEWISGMLGTPVLVVNVREDGAVNVSELINAERTRSENTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFD4</accession>
    <name>E3EFD4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369730.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1116"/>
    <dbReference type="EnsemblBacteria" id="ADO55097">
        <property type="protein sequence ID" value="ADO55097"/>
        <property type="gene ID" value="PPSC2_05425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1100"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OMA" id="PFLYRCI"/>
    <dbReference type="OrthoDB" id="495395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="54061" checksum="4EA14E94320EA4BF" modified="2011-01-11" version="1">MEITPTIQAEVQTYLKRKGLTMTEFGHTIDLNVGTVSGIVTGNRSMSVHQLDSITAGMNLPPDYFYERYIEECIEECPLNWKKISPFLYRCIELGRLDCLQRVVILLLDNPNYLPSLFEVAENVYQDGYNEAAAYLYKKVAESEKQQHSERLAICQYRLFQINVGQDRAVNLQAAIEFAPFVDRLDEIEQLDALKDLANVYRSLSMWDKVYEFAHRMGQLGQLQYHLVHNSKRKGTEPRKKLSRPLFVYIAYAELMCANACDAKGDHAQALAHLRGYSDLSWVKENDPDTLHWLEKFEHWAKINTCVNKLMSGDISVLPDYVEHISGEQHIFAELLNVIEVANRYNIDIDHILQQFEPQITVYRDQEYTSTLTEQQVILEETVRFWYKLAKYNLYKGRYLYGFKCLIEALKKAGIINHALLISNCAGLFFCFSELATPEMQAQFYSAYKEVWEKNDQEDSFNFGNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFK6</accession>
    <name>E3EFK6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_07280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370124.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1520"/>
    <dbReference type="EnsemblBacteria" id="ADO55497">
        <property type="protein sequence ID" value="ADO55497"/>
        <property type="gene ID" value="PPSC2_07280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1503"/>
    <dbReference type="eggNOG" id="ENOG50306GP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1925514_0_0_9"/>
    <dbReference type="OMA" id="KFTSSYV"/>
    <dbReference type="OrthoDB" id="1794522at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168882" evidence="2">
        <location>
            <begin position="31"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="14532" checksum="A7CCA62586D85E66" modified="2011-01-11" version="1">MSTMLNMLRTFMIVILSLVQILSLPVTFHAEDTTQSLQFTSGSSLMLQAEVTSLETDSHGLEHHSKPAVRKSSPLLHLVIAAAKSLPFVILIALVLLMSIPKLRLPFIPVICKLKKQLFLFPIKFTSSYVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFW0</accession>
    <name>E3EFW0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370451.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1860"/>
    <dbReference type="EnsemblBacteria" id="ADO55832">
        <property type="protein sequence ID" value="ADO55832"/>
        <property type="gene ID" value="PPSC2_08775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1850"/>
    <dbReference type="HOGENOM" id="CLU_2790065_0_0_9"/>
    <dbReference type="OrthoDB" id="42831at44249"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="8185" checksum="8F31C592F2C614B0" modified="2011-01-11" version="1">MNLFDVNTQNFISERCVFVNSEWVLPWKESIPHWNEPNQTPPKIMWFSVMQKEDIIKTIEIDHLLDVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG16</accession>
    <name>E3EG16_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ohrR</name>
        <name evidence="2" type="ORF">PPSC2_09800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370663.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22270"/>
    <dbReference type="EnsemblBacteria" id="ADO56049">
        <property type="protein sequence ID" value="ADO56049"/>
        <property type="gene ID" value="PPSC2_09800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2066"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_3_0_9"/>
    <dbReference type="OMA" id="EAYELTF"/>
    <dbReference type="OrthoDB" id="1626703at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="14"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="156" mass="17817" checksum="8243CD8C6722FE78" modified="2011-01-11" version="1">MENNSNEHAALKLDNQLCFAIYACSREITKLYQPYLEKLGVTYSQYLVLIVLWEREECTVKELGEALYLDSGTLTPLLKRLQNAGLIDRKRSTQDERKVLISLTTEGRALRDKALSVPGCIQEKTSMTHDQFGSLLLQFNDLLDRVHQANVQIEKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG81</accession>
    <name>E3EG81_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Group-specific protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_10815</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370880.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2302"/>
    <dbReference type="EnsemblBacteria" id="ADO56274">
        <property type="protein sequence ID" value="ADO56274"/>
        <property type="gene ID" value="PPSC2_10815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2291"/>
    <dbReference type="eggNOG" id="COG3216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1472360_0_0_9"/>
    <dbReference type="OMA" id="ISYFVVH"/>
    <dbReference type="OrthoDB" id="1845158at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018639">
        <property type="entry name" value="DUF2062"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09835">
        <property type="entry name" value="DUF2062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2062" evidence="2">
        <location>
            <begin position="26"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="202" mass="22852" checksum="97E4BB72FFFCF4FA" modified="2011-01-11" version="1">MIKFNPKRLKPHKSKKKYNVFQNIWRAIRLNFIKLLRAPGGVKKISLGFAIGFGLEMIVISTASLVYLVFYPIVRLSGGSLPAAIVGNVVGKLTFLPIVLMPFAKQLGAWIYPSHYPVHVRGGRLHEHSFMELFHGNWSVFRDLLHGGLHILIGMSIFGIVLGIISYFVIQVLYNRSLHKRLEKRKLRHGAGFSPTRLLKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGF8</accession>
    <name>E3EGF8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-338</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-338</name>
        <name evidence="1" type="ORF">PPSC2_01010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368829.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14010"/>
    <dbReference type="EnsemblBacteria" id="ADO54186">
        <property type="protein sequence ID" value="ADO54186"/>
        <property type="gene ID" value="PPSC2_01010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.190"/>
    <dbReference type="eggNOG" id="ENOG5031DZ3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094498_1_0_9"/>
    <dbReference type="OrthoDB" id="1697618at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025460">
        <property type="entry name" value="DUF4280"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14107">
        <property type="entry name" value="DUF4280"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="14842" checksum="2843A542BDA74778" modified="2011-01-11" version="1">MGEAQVKPGTGAKKSYVVAGAILSCSYGTQPTRLKRPFSHGVYVKNKAQMNIGDYVPGVNIQSFGNCSSPLNPAVQASEMVDIYGVKKAPCIPVLTMPWLNGKSDVKIEGQPALTQNCTHQCLYCGHIQIENDGQELD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGN9</accession>
    <name>E3EGN9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">PhoB family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">cseB</name>
        <name evidence="9" type="ORF">PPSC2_03515</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54678.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599457.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16315"/>
    <dbReference type="EnsemblBacteria" id="ADO54678">
        <property type="protein sequence ID" value="ADO54678"/>
        <property type="gene ID" value="PPSC2_03515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.688"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="128"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="128"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54678.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="226" mass="26028" checksum="891B1E56AF4D6C41" modified="2015-05-27" version="2">MNKRVLLVEDEIRIREVIADYFKQNNWEVYEAGNGKDALLWFDSVQPELIILDIMMPELDGWEVCRQVRSRSGVPIILLTAKSGDDDKILGFELGADDYVTKPFSPKVLIARANALMKRVEGHVQPESHILRFGSAMLNTMAHRLEVDQAEVELTPKEYELLRLLIHNKGIVVSRDAILNRVWGINFEGDTRVVDTHIKKLRSKLGRESRHIRTVFGTGYRFEEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGR4</accession>
    <name>E3EGR4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xkdQ</name>
        <name evidence="1" type="ORF">PPSC2_05665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369780.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18570"/>
    <dbReference type="EnsemblBacteria" id="ADO55148">
        <property type="protein sequence ID" value="ADO55148"/>
        <property type="gene ID" value="PPSC2_05665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1154"/>
    <dbReference type="eggNOG" id="ENOG502Z7V6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_876153_0_0_9"/>
    <dbReference type="OMA" id="YRTQSIY"/>
    <dbReference type="OrthoDB" id="1088210at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="36202" checksum="DA6C8760FBD9976D" modified="2011-01-11" version="1">MSYKVILQHKYDLSPLVENINLRDSLEQIAYQGTVNLVVTSDMPTISPGMSIRVSGIPYGKKDYVPLLSPAVIWEVETSNNGLKRMTLTLYDRTVYLDKSEDEYLLPAKQTATQRFQKYARDWKLKIASLPDTKKQLGRAVYRTQSIYSMMLGDLRETAKAGGELYHPRMISSGLELYELGTNKDVYVLERVTDTTQSRTLEGAATRVKVLATAASETGKEVPSKVMALEEKDIAKYGTLQVIVQDDEVKSGAAARELAKSKLRGIQQTISVNAPDMNTIRAGDAVILGTMKLLVISVSRELGNPGSMSLELGTYDDVKRRFYLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGV3</accession>
    <name>E3EGV3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_05830</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369819.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18795"/>
    <dbReference type="EnsemblBacteria" id="ADO55187">
        <property type="protein sequence ID" value="ADO55187"/>
        <property type="gene ID" value="PPSC2_05830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1194"/>
    <dbReference type="eggNOG" id="ENOG502Z8P8">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045094_0_0_9"/>
    <dbReference type="OMA" id="VLIGFHI"/>
    <dbReference type="OrthoDB" id="379212at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007016">
        <property type="entry name" value="O-antigen_ligase-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04932">
        <property type="entry name" value="Wzy_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="52"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="101"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="128"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="154"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="185"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="262"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="307"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="394"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="433"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="460"/>
            <end position="477"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="480" mass="52635" checksum="C641E9B3F374B24F" modified="2011-01-11" version="1">MSRLADQQISFWLGSRRGIGMIGMGVLACMLPLAIGFVSAKMNPTTSQQGAILLAIVFPAFLLAILQSRLLISYTLVVWAVGPEIRRIADWLEGTYHSVSLLSVAPLLVSSMLIIPVLRGIHLAEKPLTRIAVFFGIELAYGSVVGLFKNGIVFAYDLANYVVPLLLLPYLAIKPMKAKELDRLLYSYANIAVLVAIYGIIQYLTVPPWDAFWMNHVEMNSIGMPEPLQIRVFSSMNSPGPCAIFLAMALVPMLMEKRWRGTLGWIGVLLTVVCLLVTLVRSAWLIAFVMLLAYILSSSSKGKWKTLFQLAIVGLLLYIIVPKLPGAEGLVARMQTLTDIQQDHSYNERLDLLHTMLPAITSNPVGQGIGSVGIGTKLDNGGDLGELGIMDNGYIAIFLTFGICGAFFFFGGLIVIIKRLLVRIAERNSSQPYIRLALATWAGAVASLISDNGFPGMRGYLIWMMIGIGLWAKDVIAERR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH49</accession>
    <name>E3EH49_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370236.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55609">
        <property type="protein sequence ID" value="ADO55609"/>
        <property type="gene ID" value="PPSC2_07770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1616"/>
    <dbReference type="HOGENOM" id="CLU_2168480_0_0_9"/>
    <dbReference type="OMA" id="MKAKLKF"/>
    <dbReference type="OrthoDB" id="2134920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169237" evidence="1">
        <location>
            <begin position="28"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="12406" checksum="B86CF1F0E14D6F5C" modified="2011-01-11" version="1">MKAKLKFLGLAALTVTFAVVISNNVFASDDTSEEMKDVTKEIVPDSVLEGLNHPDKIYTKDALFIKKTQSLHDEDKFNQNEVVYDVSKATDETKAIIQYEATYIKEEDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH67</accession>
    <name>E3EH67_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bscR1</name>
        <name evidence="3" type="ORF">PPSC2_08900</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370476.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21365"/>
    <dbReference type="EnsemblBacteria" id="ADO55858">
        <property type="protein sequence ID" value="ADO55858"/>
        <property type="gene ID" value="PPSC2_08900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1876"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_12_2_9"/>
    <dbReference type="OMA" id="KRRTDEC"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="192" mass="21946" checksum="04A2B4E64B86874C" modified="2011-01-11" version="1">MGEMHGDKYEAILNAAYTVFGTKGFYESKISEIAEQAGVAKGTVYLYFKSKEQLFIAVTRRDCEQYLAEMQDALVNRTLGEGLLRMASLHLHYYYKRKQHTKLFFMTPNSDPDLIEFIRGFIQDYTNLVKNKLASEGVLQPEFHAKAFIGMMERLKMDILLNQDFRECDVDQTAALAANLFMHGCEAGVQKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH68</accession>
    <name>E3EH68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">uup</name>
        <name evidence="7" type="ORF">PPSC2_08905</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370477.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21370"/>
    <dbReference type="EnsemblBacteria" id="ADO55859">
        <property type="protein sequence ID" value="ADO55859"/>
        <property type="gene ID" value="PPSC2_08905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1877"/>
    <dbReference type="eggNOG" id="COG0488">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_36_0_9"/>
    <dbReference type="OMA" id="ISYKPQY"/>
    <dbReference type="OrthoDB" id="1112046at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032524">
        <property type="entry name" value="ABC_tran_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037118">
        <property type="entry name" value="Val-tRNA_synth_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16326">
        <property type="entry name" value="ABC_tran_CTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="4"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="319"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="534"/>
            <end position="568"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="241"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="575"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="351"/>
            <end position="358"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="649" mass="73916" checksum="76131D47D590B955" modified="2011-01-11" version="1">MNIMTVEHITKSYGEKMLFEDVSFGMDERDKIGVVGVNGTGKSTFLRVISGLEPPDEGNIAVNNDVRIQYLAQNPEFDPEMKVLQHIFHGNQPEMKAVREYTETMELLELNPGSEELQNRLLRASQQMDTFQAWQLESEAKNILTRLGITQFESRMGVLSGGQRKRVALAAALIQPCELLILDEPTNHIDNDSVAWLEQYLQKRRGALLMITHDRYFLDRVANVMLELDHGRLFRYEANYTRFLELKAEREEREASSEQKRKNLLRNELAWIRRGAKARSTKQKARIDRYEQLRDQQPEARSGSVDMSVASTRLGKKILEIEELSKSVDSRKLIQDLSYIAVPGDRVGILGPNGSGKSTLLQMIAQRVEPDSGSVVLGPTVKLGYFTQEHQEMDESLRVIEYIKEEAEVIRTADGSTITAAQMLERFLFAPSAQWTVISRLSGGEKRRLYLLRVLMSAPNVLLLDEPTNDLDIQTLSVLEDYLDEFPGVVFIVSHDRYFLDRTVDKILAFEGNGQVRVHVGDYSEYAEWISKNAQSSANTSDSTGTASSNRSSTPKSAGSSDSVKGTSKPKLKFTFKEQREYEQIDELIEQAEQKLADIQRQMEESFSDSTRLQELMAEQAKAEQHLEYQMERWTYLNELAEQIEQSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHD0</accession>
    <name>E3EHD0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ydeR3</name>
        <name evidence="9" type="ORF">PPSC2_09200</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370538.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1949"/>
    <dbReference type="EnsemblBacteria" id="ADO55921">
        <property type="protein sequence ID" value="ADO55921"/>
        <property type="gene ID" value="PPSC2_09200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1939"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_23_0_9"/>
    <dbReference type="OMA" id="ANIYFAH"/>
    <dbReference type="OrthoDB" id="1210653at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="155"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="265"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="296"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="321"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="360"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="386"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="32"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="43410" checksum="BF187AF8536B2B6E" modified="2011-01-11" version="1">MKTSEENALPLSHQTIANTAEIAPVPVLSRSVALLFAIACGLAVANIYYAQPLLDALAHEFGITHSSVGIVITVTQICYALGLLLLVPLGDLLNRRRLITGQMLLSVLALILVSFAPTRTILLMGMAMVGLLAVVTQTLVAFASTLANPTERGQVVGLVTSGVVIGILLARTVAGVLTDLAGWRSVYLISAVLTLFMAVALLRVLPKNEPTSATLSYAQLLRSVITLFVQERILRIRAVLALLIFTAFSILWTSLVLPLSAPPFSLSHTAIGAFGLAGVAGALAAAQAGRLADQSLGQRTTGIALVVLLLSWLPIGYTEHSLFALTLGVILLDLAVQAVHVTNQSLIFNVRPEARSRLTAGYMIFYSIGSATGAITSTHMYTYAGWNGVCLLGAGVSALALIFWAVTRRST</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHF3</accession>
    <name>E3EHF3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Proline--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.15</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Prolyl-tRNA synthetase</fullName>
            <shortName evidence="8">ProRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">proS</name>
        <name evidence="10" type="synonym">proS1</name>
        <name evidence="10" type="ORF">PPSC2_10070</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro)</text>
            <dbReference type="Rhea" id="RHEA:14305"/>
            <dbReference type="Rhea" id="RHEA-COMP:9700"/>
            <dbReference type="Rhea" id="RHEA-COMP:9702"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78532"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.15"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">Consists of three domains: the N-terminal catalytic domain, the anticodon-binding domain and the C-terminal extension.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 3 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.15" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370716.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22540"/>
    <dbReference type="EnsemblBacteria" id="ADO56106">
        <property type="protein sequence ID" value="ADO56106"/>
        <property type="gene ID" value="PPSC2_10070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2122"/>
    <dbReference type="eggNOG" id="COG0442">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001882_4_2_9"/>
    <dbReference type="OMA" id="EVYWVTH"/>
    <dbReference type="OrthoDB" id="665824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004827">
        <property type="term" value="F:proline-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006433">
        <property type="term" value="P:prolyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00778">
        <property type="entry name" value="ProRS_core_arch_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01571">
        <property type="entry name" value="Pro_tRNA_synth_type3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002316">
        <property type="entry name" value="Pro-tRNA-ligase_IIa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004499">
        <property type="entry name" value="Pro-tRNA-ligase_IIa_arc-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016061">
        <property type="entry name" value="Pro-tRNA_ligase_II_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017449">
        <property type="entry name" value="Pro-tRNA_synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033721">
        <property type="entry name" value="ProRS_core_arch_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43382">
        <property type="entry name" value="PTHR43382"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09180">
        <property type="entry name" value="ProRS-C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01046">
        <property type="entry name" value="TRNASYNTHPRO"/>
    </dbReference>
    <dbReference type="SMART" id="SM00946">
        <property type="entry name" value="ProRS-C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64586">
        <property type="entry name" value="SSF64586"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00408">
        <property type="entry name" value="proS_fam_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="9">
        <location>
            <begin position="38"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="482" mass="55399" checksum="A79792AE702D15FE" modified="2011-01-11" version="1">MSNDKQFVEEITPQSEDFSRWYIDVIKKAELMDYSPVRGCIVFRPDGFEIWEHIKEAMDVRFRETGHRNAYFPMFIPESFFQKEKEHVEGFNPELPWVTEAGGEKLEERLAIRPTSETMIGHMYSKWIQSYRDLPVLINQWANVVRWEKRTLPFLRTSEFLWQEGHTAHETEEEAREETMKMLEVYREVIEEVLAIPVITGQKTPSEKFAGAKDTFSLEAMMRDGRAVQAGTSHYMGTNFAVAFDIKYLSRENNLEFAHTTSWGTSTRLIGALIMVHGDDRGLALPPKVAPTQVIMVPIGPPKKRDAVIARADELFAELKQAGVRVKMDDRSDVSPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRISGEKKIVQQDNLLEEVHAMLAQVQQEMFDRAKNFMEENFYSVDTLDEMKTLMEEKRGFTLAGWCGSEECEDKVKEVTGATSRNIPFKTTEQKTTCLCCGKPAKHTVVFARAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHP9</accession>
    <name>E3EHP9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370917.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2339"/>
    <dbReference type="EnsemblBacteria" id="ADO56311">
        <property type="protein sequence ID" value="ADO56311"/>
        <property type="gene ID" value="PPSC2_11000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2328"/>
    <dbReference type="eggNOG" id="COG4225">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_414853_0_0_9"/>
    <dbReference type="OMA" id="HYSSEAR"/>
    <dbReference type="OrthoDB" id="252999at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="470"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="636" mass="70847" checksum="3E65223066DCFBAE" modified="2011-01-11" version="1">MNKLQTGSVYPWQTELERFIEQVESAPNRENDGWTHERKLDVLEKLVRAYASYQDENGAIIDPHSESERYYSTPSYALAAAVLVKEGRHDLLESAAAALTHSIACVVEEKAPDHHPDFFPIMMMGAYRILKNLLPEQATAWKQQLSRIQPEQTYIFTMSKMKNPNRMINWNAIMISGEFLRATEGIAADSEWMETYIRNYHLPRFTSLGLYQDGPLDRPNSPFAYDIVTRFHLGVMLENGYNGGCALEVRDYLRRGALSSLLTLSPHGEIPPRGRSAQHQWNEAAAAFVFTTHAQQAYTAGEYGLAGAFRRAADLCWQSIGRWQTDDGKLHIVRNHYSSEARHGFEVYSNHTCYSLWTAAVLAHTLLHGKEIDCIPPTSIPAEIGSRVLATDGWFQTVIAAVDGQQMFVQTSINDPYNIPGIVRIQRSALPSLIGPSSAGHADRGFTGFAEGDIFPLSYTPAWQTEDGKWHSLSEGIPGTLEFDRDGGIDPQDGGGNVQMERSSASDGETDFTLLWEGPFPGVREIRTHYRQVPGKIEVSYELQGNIQNVGALIPLMAYDGRERSVIHHVMTAGKETESIRVEYAGASLEVIPTTEGTNVVWPEELTAVACRNGLLKGARLECGGSRISFIIRLPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIF5</accession>
    <name>E3EIF5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycerol-3-phosphate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugpE1</name>
        <name evidence="7" type="ORF">PPSC2_06190</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369899.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19145"/>
    <dbReference type="EnsemblBacteria" id="ADO55268">
        <property type="protein sequence ID" value="ADO55268"/>
        <property type="gene ID" value="PPSC2_06190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1276"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_1_9"/>
    <dbReference type="OMA" id="IAFFIAW"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="65"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="179"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="237"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="30731" checksum="60CE965A6E9A8F8C" modified="2011-01-11" version="1">MKQHLNSTLLYVLLTIAAALILYPVIYTFFMAVMSPEEASAYPPSFFPHSFHMANFTEVFEIVPIAAFIGNTFLISGLTMIGQLITASLAAYAFAKMEFKGKNFIFSMFVATMMIPWEVTIIPNYLTVRSWNWLDTYQGLTVPFLATAFGTFLLRQFFLQLPKELFEAARMDGCGHIRYFLFHVLPLSRPALGTLAVYSFLNMYNSYLWPLLVTNSENMRTVQIGISMLEFQESTSWNLVFAGTALVILPSLLLLIFGLKQLVRGMAAGALKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG5</accession>
    <name>E3EIG5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yoaV3</name>
        <name evidence="4" type="ORF">PPSC2_06240</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369909.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19195"/>
    <dbReference type="EnsemblBacteria" id="ADO55278">
        <property type="protein sequence ID" value="ADO55278"/>
        <property type="gene ID" value="PPSC2_06240"/>
    </dbReference>
    <dbReference type="GeneID" id="66573693"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1286"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063026_0_0_9"/>
    <dbReference type="OMA" id="LGAAMWG"/>
    <dbReference type="OrthoDB" id="1515911at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="81"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="112"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="139"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="172"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="205"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="231"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="267"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="293"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="21"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="172"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="315" mass="34860" checksum="D26060D65A5B283A" modified="2011-01-11" version="1">MSQSSTVLTSKDFDRSSHMKSGFWLVAIGAALWGADPLFRIILLKSFTSAQIVLMEHALLFIALTPMLWKHREELKTIRFRQVFAILFVSWGGSALASVIFTMALSNGDLNAVLLLQKLQPLVAIILARVILKEMLPRHFGILIVIALFGTYLLTFGWSLPFGHVHDFVQVGSLLALGAAILWGGSTVMGSYLLRSMKYETVTSLRFMVALPLLIVLTSVEHAPWNMPTGTWAGAAVIINLLLQALLPGLLSLLLYYKGLSTTKASYATMAELSFPMVGVVINWIAFQQIVTVAQLTGFMLIWVTLFMISRQQKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG8</accession>
    <name>E3EIG8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">resE1</name>
        <name evidence="10" type="ORF">PPSC2_06255</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369912.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19210"/>
    <dbReference type="EnsemblBacteria" id="ADO55281">
        <property type="protein sequence ID" value="ADO55281"/>
        <property type="gene ID" value="PPSC2_06255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1289"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_3_9"/>
    <dbReference type="OMA" id="WDRGKGI"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="95"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="36000" checksum="FAA6973EA92CFDB6" modified="2011-01-11" version="1">MIIETIFEWIVVLIMSVVILWLWRERVAYKRKIKDIRIALERIVTVNHAEKLLYVTGNVELQRLMTEINRLLDLNLRVSADYNRSQIAMRKMISNISHDLKTPLTVVLGYAEMLDGDPDISPEERIKLLSRIHQKTSEAIELIGSFFSLAKLEANDTDIQLTRLEIGELCRRSILEFYDLLTAQGFTVHIDIPEHPIYALGNEGAIGRVLSNLISNAIRYGAEGRTLGLTLSEQQDTVRIEVWDRGKGIQEPEQDKVFERMYTLEDSRNKAVQGSGLGLTIAKRLVECMNGEMQLTSKPYEQTVFSFTLKKINY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIH7</accession>
    <name>E3EIH7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Lysine transporter LysE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ycgF3</name>
        <name evidence="6" type="ORF">PPSC2_06295</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369921.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19240"/>
    <dbReference type="EnsemblBacteria" id="ADO55290">
        <property type="protein sequence ID" value="ADO55290"/>
        <property type="gene ID" value="PPSC2_06295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1300"/>
    <dbReference type="eggNOG" id="COG1280">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087840_1_0_9"/>
    <dbReference type="OMA" id="VPPGPMN"/>
    <dbReference type="OrthoDB" id="1953934at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="63"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="22864" checksum="911CD321F2B52754" modified="2011-01-11" version="1">MALFITYVLLGFSIALPVGTITVEMTKQGLKNGFMHGWIVGLGGMTVDLFLIIGLYFGLASVLSLPVVQVIMWLVGAIFLCYVGYDSIKNADHDIALEGEKKTKSLFSSYKNGLLVAVSPGNLVFWVSVFGTVLASSFDRSNTSQFLIVGLGILFGILVHDLGLMTLVATTRKAMNRTAIKWVTICAGVVLIGFSVYFLYEFMVSLQKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIQ8</accession>
    <name>E3EIQ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Yjl217W</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yjl217W</name>
        <name evidence="1" type="ORF">PPSC2_09230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370544.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21700"/>
    <dbReference type="EnsemblBacteria" id="ADO55927">
        <property type="protein sequence ID" value="ADO55927"/>
        <property type="gene ID" value="PPSC2_09230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1945"/>
    <dbReference type="eggNOG" id="COG3506">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082825_1_0_9"/>
    <dbReference type="OMA" id="WAKLCLE"/>
    <dbReference type="OrthoDB" id="1485526at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009784">
        <property type="entry name" value="DUF1349"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35332">
        <property type="entry name" value="PTHR35332"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07081">
        <property type="entry name" value="DUF1349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="202" mass="22642" checksum="F0F3CC93DA041217" modified="2011-01-11" version="1">MNVFEGFNDKVLPQGWGWINEPTVWSFDEFKALQVSAPSQADFFRDPSGAVIKSSAPFLHTTLQGDFTIWTRVRVDMKQPYDSGCLMVMADDTHWAKVCFEYFENTPSILSVVTRDTSDDCISGAMDASNPYLRVTRAGNCFAFHYSSDGQHWKLARYFGMNVPSQLKVGVVAQSPVGEGCNVTFDGLTITNHVFEDIRNVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIS7</accession>
    <name>E3EIS7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sNF3</name>
        <name evidence="9" type="ORF">PPSC2_09325</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370563.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1974"/>
    <dbReference type="EnsemblBacteria" id="ADO55946">
        <property type="protein sequence ID" value="ADO55946"/>
        <property type="gene ID" value="PPSC2_09325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1964"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046685_2_1_9"/>
    <dbReference type="OMA" id="IMIIQAT"/>
    <dbReference type="OrthoDB" id="1345431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="157"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="207"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="239"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="369"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="1"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="45619" checksum="79F67573F5A8E3CC" modified="2011-01-11" version="1">MRPHKLFYSVSFLQFFMSEITGTTLILFLLAKGLSLQSANFLLVVFFVSIFLFEIPTGAIADKYGRKISVVLGLCCFLVYSVLFVWVDHMWLLVFAQVFGGLAICLQSGSLESWVVENSDKPMEVLFTTSNSIQYISGFICGLLGAFLATFNYSLPWVASIVSIILCIFLCCFYMKEKNITHRKTSATRIKTIIGESVRIGFENKSIWIVFIIGLFISFSNSAGNTFQQPRLVGLSEQGIWIMGLIKAGYSLCMTLGSYLVRRLGARYSDVHILMYACGMIGIWLILAGAFNTFYPVLLTFLIYEIGRGMYPVAKQIFLNKRISNEYRSTLLSLDSAISQLGMCIGLIVTGIVSRNFTNLASDQTPIQISWMLCGGIALIPIFLLLYVRRGSRKNSSWKEKATKQNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIW0</accession>
    <name>E3EIW0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Peptide synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">lgrD</name>
        <name evidence="8" type="ORF">PPSC2_09470</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370596.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21940"/>
    <dbReference type="EnsemblBacteria" id="ADO55979">
        <property type="protein sequence ID" value="ADO55979"/>
        <property type="gene ID" value="PPSC2_09470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1997"/>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3320">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_2_17_9"/>
    <dbReference type="OMA" id="ENDKFTM"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05235">
        <property type="entry name" value="SDR_e1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010071">
        <property type="entry name" value="AA_adenyl_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020459">
        <property type="entry name" value="AMP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013120">
        <property type="entry name" value="Far_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010080">
        <property type="entry name" value="Thioester_reductase-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07993">
        <property type="entry name" value="NAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00154">
        <property type="entry name" value="AMPBINDING"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01746">
        <property type="entry name" value="Thioester-redct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0045">Antibiotic biosynthesis</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 6" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="7">
        <location>
            <begin position="739"/>
            <end position="813"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="6">
        <location>
            <position position="774"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1231" mass="135462" checksum="5D33F67BB090E595" modified="2011-01-11" version="1">MASLLQNSTQTAPSPFLVPLDFARIQRKYTSSTYQVELGTSISDQLNQQKVAEDKQAVLLSAYTAWLYRLSAEEEVSFSTFMPQSGLLTASLTVEKETTFHELASLFQEMLREPHAFLAEPQADTSFSTTLPTDSGVESRIMDWAVSESNGTYQIQIRYDQSLLLETTVVRYAEYFVTLLRGALNNSHALVNSIDILSDADRAAHEALNNTVVKYPEHQTIHGMFEEAASQYPDRPAIASHTGEYTYRELNERANQVARVLLSKGLTKGEFVTIFMERSLETVISLLGILKAGGVYVPVDPAHPADRSSYIVEDTRSPFVLTTSALTQQAAELCGSIETVKEILAIDGPLAGYAASNPNVDVSSDDLAYVIYTSGSTGKPKGALIAHRGVVNLGAVVQRDCDITPQDVLTQFATYSFDASVWDTIGALFYGAKLYLLSSEERVSVEEFAEAIERTGTTIITILPTVFFNQLSTYLSDEGYRKLANVRIVTVAGEALYGSQVRAFQSKFGTDTDIVNVYGPTECTVATTTHRVRGAVPEHVVNIPIGKPIYNYKVYIVNDDNKLCPVNIPGEVCIATPALAHGYLHQPERTAQSFVDNPFVPGEKMYRSGDIAKLLPDGTIEYVSRKDSQLKIRGNRIEIGEIEDHFSKHPGVQDVAVVAVKDHTDQNMLVGYFTTSDGQTIPQDVIQSYIGGKLPSYFVPTHVVHLEAMPISPTGKIDRKKLALRPLPEVPDVTSGGEPLREGTETLIAEAWTQVLGKNNIGATDDFFLIGGDSLRVIHVLAILKPRYGSLRIGDFFRYKTVRELAEYVEQLVTEQAPQRKSLAISQEKTDLNEHPIELPGTSDLAEIRDLRVILLTGATGYLGSHILYDLLHRTEAKVYAMVRPSQDGPSGFERIQSVLTGYFGQDISSLMEGRVKAVYGDLEQADLGLSSVDRHMLEHHIDGIIHSAADVRHFGDSATFDRTNVTGTLELLKIAQAKPGVSFHHVSTMGIPEDLANEGKWESTLELSAFPDELHVDNLYTNSKLAAEKLLFQAAQAGTPVSIYRAGNLTAHSANGRFQRNIDSNAYYRMMKAMLLLGKAPQADWHTDFTPIDYASRAIVELSVKQKSANRIFHICNPNPLPYDELIAMVNQLGYAVETLPFDDYSAWLLNPSSGIQEDALHLAMGQLEGDGAKDSAYRYGCSVTTALLEQAGVQCPVTDLEFIRNMIEHAVEIGYFPASSSVSAQATQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJL6</accession>
    <name>E3EJL6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">paiA</name>
        <name evidence="2" type="ORF">PPSC2_12210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371170.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2596"/>
    <dbReference type="EnsemblBacteria" id="ADO56566">
        <property type="protein sequence ID" value="ADO56566"/>
        <property type="gene ID" value="PPSC2_12210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2581"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_18_0_9"/>
    <dbReference type="OMA" id="QFFFVYF"/>
    <dbReference type="OrthoDB" id="1526822at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="11"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="20065" checksum="8CB503F7ECCAA796" modified="2011-01-11" version="1">MNAKIIKCSRADLQTLQEISIETFNDTFKEQNSPENMQAYLERAFNSKQLEKELSNVSSEFFFVYFNGELAGFLKVNINDAQSEKMGDESLEVERIYIKNKFQKHGLGKYLLNKAMEIALGHNKKKVWLGVWEKNENAIAFYKKMGFVQTGAHSFYMGDEEQIDFIMTKSMIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJP0</accession>
    <name>E3EJP0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386052.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0246"/>
    <dbReference type="EnsemblBacteria" id="ADO59638">
        <property type="protein sequence ID" value="ADO59638"/>
        <property type="gene ID" value="PPSC2_26945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5697"/>
    <dbReference type="eggNOG" id="COG3872">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_098196_0_0_9"/>
    <dbReference type="OMA" id="ICICIMS"/>
    <dbReference type="OrthoDB" id="1816476at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010787">
        <property type="entry name" value="DUF1385"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07136">
        <property type="entry name" value="DUF1385"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="160"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="199"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="28586" checksum="844AC95D8D53F4F3" modified="2011-01-11" version="1">MSVTLHGGRAHLNGVTFYTDKFISKAYREKDEIKVSVKERKMKSHFYDRIPFLRGIMLLIEMLLMNPIPIICICIMSVIMLSVGDEVSGSPQQVSTLRIIEPYILPGLFFVIALVIRSTKIGRYHAAEHMTAKTFSKGIDLTVNNVMKQSRVYESCGTNLVVFMVVTFFLLSLFNLNVWICFILTWSISYEIFCVEEGWIKRVVLPFYWIGGVAQYFLFTSKPTEKEVLVAMASAKELIRRDVKEVKNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJT7</accession>
    <name>E3EJT7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386099.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0294"/>
    <dbReference type="EnsemblBacteria" id="ADO59685">
        <property type="protein sequence ID" value="ADO59685"/>
        <property type="gene ID" value="PPSC2_26695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5640"/>
    <dbReference type="HOGENOM" id="CLU_2667681_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8557" checksum="697FD9308465DF26" modified="2011-01-11" version="1">MATILLENINEASLVLKDDGAFFAMKELSNLAREKLLLEGYEEVSNVEQIKRKNQFSIEASEIGFYFFGYDGENN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJZ4</accession>
    <name>E3EJZ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60013.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886257.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO60013">
        <property type="protein sequence ID" value="ADO60013"/>
        <property type="gene ID" value="PPSC2_28120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5961"/>
    <dbReference type="HOGENOM" id="CLU_1531089_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60013.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="20925" checksum="46D48B03C5049B91" modified="2015-05-27" version="2">MPNTYRETSQWNAGKMKHFIKAKKKGTLIYQELRNIPIQGMIDEEDGVSLLEQEYLVFDIPDELDDEHFREYKKNWNTVEFRWFPGWTEVACQSPRVFHNGLLRELEELGYITYTVKVYPNAKNEYPYYVNPKGWRLVYNLINAVRGAIQKRNFNFLRREYGEANLEDGVERNDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK45</accession>
    <name>E3EK45_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0363"/>
    <dbReference type="EnsemblBacteria" id="ADO59754">
        <property type="protein sequence ID" value="ADO59754"/>
        <property type="gene ID" value="PPSC2_26410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5566"/>
    <dbReference type="eggNOG" id="COG5164">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_753905_0_0_9"/>
    <dbReference type="OMA" id="ATNTGYR"/>
    <dbReference type="OrthoDB" id="1009486at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="347" mass="37179" checksum="315684C4F089A759" modified="2011-01-11" version="1">MKEKIKGYKAFEKGLVCRGFQYEEGKTFEHKGQIVPCSTGLHFCENPLDVLNHYPLIDSRGELSEFAEVEALGETKKVDDKSVTNQLRISAKLDLPEYINESCEFLRVKCAEIAKVNSENESQLSTSEDDIKLVGSGDYSQWAASGHRNHLSSLGEGCQLAASGRNSQLVVSGDYSHLAAAGHFSQLASTGSNSYLAASGDDSRLAASGDDSQLATSGDYSLLAASGDDNRLAASGIYSQLAATGNKAQLAASGNDSRLTALGNNCMVVSSGDDNDLTLDGKDSVGAAIGLESRIRSKVGNWITLAEWKCSGERYVPVCVKSAQIDGKILKEDTWYKLENGEFVECS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKH4</accession>
    <name>E3EKH4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386220.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0416"/>
    <dbReference type="EnsemblBacteria" id="ADO59806">
        <property type="protein sequence ID" value="ADO59806"/>
        <property type="gene ID" value="PPSC2_26135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5503"/>
    <dbReference type="HOGENOM" id="CLU_2130972_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="12880" checksum="1F49EC602C1552BE" modified="2011-01-11" version="1">MKKAQLTQAQATALDLLKKIYPDSDIVKLHAMHPRQWDNEFEGIEGLPLDTLICALYHDEGYEVIQTMEERMLEVYLKGIVHQGKQQEAQTGAFQLGMQKALSIAGIKIPDIND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKI7</accession>
    <name>E3EKI7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59819.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886220.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59819">
        <property type="protein sequence ID" value="ADO59819"/>
        <property type="gene ID" value="PPSC2_26080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5488"/>
    <dbReference type="eggNOG" id="ENOG50320CA">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107464_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59819.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="28583" checksum="6EE37D7BDD312BE2" modified="2015-05-27" version="2">MISVVVMLSEEVIFVFIPAKNIKKKYNVRGSFYRIACGDRDYPELKCRSKLEIYLRDYNIENKIPDAYVIMENPGSSSSLEHRGGSIDGPLYKSKGSRLASSIKNTPMTKTKPDITQYQIMRLMATYDWNYVLVLNLSDLRNTHSNHFLKIYNKLNHPYLSLFSTCRDKERKELLQHAEEKPVIVAWGMNEGLKTLSAQALSKLPENIRGLQTEKSLSFQYLHPWSRQWGAGRKWFLRFIDEFQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKK9</accession>
    <name>E3EKK9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386255.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0452"/>
    <dbReference type="EnsemblBacteria" id="ADO59841">
        <property type="protein sequence ID" value="ADO59841"/>
        <property type="gene ID" value="PPSC2_25965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5461"/>
    <dbReference type="HOGENOM" id="CLU_2651091_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="76" mass="8324" checksum="C955442D3DCFF52D" modified="2011-01-11" version="1">MDRKIQESPSILRDHIGVLLQQIDIKDKALKEAETFVKELILAADTVPASHLDLEEITKDGTTVINSIAAALIGEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKL3</accession>
    <name>E3EKL3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386259.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0456"/>
    <dbReference type="EnsemblBacteria" id="ADO59845">
        <property type="protein sequence ID" value="ADO59845"/>
        <property type="gene ID" value="PPSC2_25950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5457"/>
    <dbReference type="eggNOG" id="ENOG502ZRT3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2750517_0_0_9"/>
    <dbReference type="OMA" id="INIEYFY"/>
    <dbReference type="OrthoDB" id="2098924at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="73" mass="8468" checksum="1BE2B1C98033A928" modified="2011-01-11" version="1">MSEVEMELEEYINRQIADGYIAEDGYPLKCQHCDSKEINIEYFYDEHVVVEKEANCGNCGSSVGYWSYGTWEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKV5</accession>
    <name>E3EKV5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_27315</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385970.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0163"/>
    <dbReference type="EnsemblBacteria" id="ADO59556">
        <property type="protein sequence ID" value="ADO59556"/>
        <property type="gene ID" value="PPSC2_27315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5781"/>
    <dbReference type="eggNOG" id="ENOG5032RFM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_280581_0_0_9"/>
    <dbReference type="OrthoDB" id="1788467at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168995" evidence="3">
        <location>
            <begin position="32"/>
            <end position="1119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="348"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="391"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="439"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="465"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="498"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="524"/>
            <end position="546"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="576"/>
            <end position="608"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="809"/>
            <end position="840"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="989"/>
            <end position="1010"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1027"/>
            <end position="1048"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="577"/>
            <end position="608"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1119" mass="120248" checksum="173DB307865E0A14" modified="2011-01-11" version="1">MNIQSTKKGIAALVAFLIIFGVFISPIKSYAHENYFFQVLIDENQYTYQGNVLADEADWLSNEEGHMEAQFGDFTPLIKDNYTAIPQKGEKVKETKVVGQQALPFSFSPEEKGDGWFDNTPVNNATKDDVNRAYFVKDTLVTGLNDALRILNKNKPFEDMGELLTKSNELGNAIRQVSNGSTASIDGFTFRQGRASFNKDPDLNKKTGIESKDYVTISQTKNGETLEYEFVYRVVKGYTEKGNWDNKVYNEAYKNPNDTKYITWNMIMYQGVYAYSAKGMTSKNGGEVAKPGQLEEMVAWMFESLYNGIRNLLGLYDLNELIFNDGIRGSAAWHYGAMPMNWEENVTLYHWIFQLIAWTVIGFSIAKLLITRNISTINPSMRVSLISGVQDLMITGMILAFTMPIINVLLNINAKIVDIFAAVGPDLDSVMGVNNYSNMLAGIIIQFFFLFIMIYMNFTYIIRSITIAILTAMAPLFVVTLSLGAKWKGLFSQWMKELTSNIFLQSFHSFILSFLFISTTSSRGIEAIVICFALIPLTEFFRGMIMGQAGGIASRMGMGSVVAGAGLAMGAAQKGTSMGQKRVQNSNGQSGSPSSLNGGSTSEGSNAMSQMNMNDLKLGSSDNLRNKAEAGVTQSRTKHQDLRNAQLQKQVPPEIISKGMDSQEYKEYMGAPILSEAQAKYADLKDNFKADLQSGIQNAVSGTGLKNMAMGTGKTLLGASAMMAGAGFAMAFGGENAGAVAMGSRVAGMGGRTAYQTAKAGITKVAPSVGQAALIAGSVGAGFVAAKMGSANSGSNSASATNLLNHQRAGKMGQGQSDVPLSQGTTESHTTPETSSAENLGSAHAANYRTLTENIGQRSIGNDGDFQVYRDGAALRAQGILKASENSNGTSVYSYDTSKLSDGDRNNIQTYANTFSGNNQDQITQLRKSGVEGAWKNQDGSIGVAYNQMGKEKLGIQRVDTVGGNIVETKRSNQPESTRVSFQVPLQHSANASTGASKGREGFSISGGEINNSSIVNKSGGVSISGGEVNNSSIRNKSGGVSISGGEINNSSIRNTSGGISIHGGAINNSSVANTSPSGASNHSRSMMDEINQKIRSGDVMVNNDVIIMGGTLKNNIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL15</accession>
    <name>E3EL15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385991.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0184"/>
    <dbReference type="EnsemblBacteria" id="ADO59577">
        <property type="protein sequence ID" value="ADO59577"/>
        <property type="gene ID" value="PPSC2_27210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5758"/>
    <dbReference type="HOGENOM" id="CLU_1659045_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="91"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="18474" checksum="9FF28803402B171F" modified="2011-01-11" version="1">MSERTYELPSGNELTVAKNNTVWYGFPGNKSMLSDFYSILDLLDLVDSLQQQVKKLSEYKVSSKQFGELYDKAISVVRQNESNQKKADDNYRALLEETIQLRDQLAEMQRERDRTIAELREDLEFYAENGNYRERIIGWGPEIPVIKDGGRRARKSLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBM7</accession>
    <name>A0A0D5ZBM7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">LppY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">lppY</name>
        <name evidence="1" type="ORF">PPSC2_03640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885870.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0720"/>
    <dbReference type="EnsemblBacteria" id="AKA44185">
        <property type="protein sequence ID" value="AKA44185"/>
        <property type="gene ID" value="PPSC2_03640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.713"/>
    <dbReference type="HOGENOM" id="CLU_139582_0_0_9"/>
    <dbReference type="OrthoDB" id="1843967at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011094">
        <property type="entry name" value="Uncharacterised_LppY/LpqO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07485">
        <property type="entry name" value="DUF1529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16000" checksum="7D2C292897367E74" modified="2015-05-27" version="1">MAVSPLCKRFADILKATPQIINGVCTASAVRNNIKPIILGKRTRSFLAIPQAFSFESIGRNGKGLCLGETVILTAEINPFISRLRKHDIKVTALHNHWLFDNPNLWYIHFEKVEKPLVFATEVRDALNVLTTKPVRPVIQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC30</accession>
    <name>A0A0D5ZC30_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599524.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1125"/>
    <dbReference type="EnsemblBacteria" id="AKA44193">
        <property type="protein sequence ID" value="AKA44193"/>
        <property type="gene ID" value="PPSC2_05465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1110"/>
    <dbReference type="HOGENOM" id="CLU_128177_0_0_9"/>
    <dbReference type="OrthoDB" id="1600857at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="167" mass="19489" checksum="FBDED97B16F811D6" modified="2015-05-27" version="1">MKHYSLSNQLHSEADFKLPKYSDTHILNCMLDFQNLAQHQIQLAQMMRDHNQWLNCLILCDRAMFSMAKAIYVHRNQIIPLSISLSMNDLLRLIRSDAEPCLDMVLFMGTVHYLVSGEDEASEETMKQEEVDLLLYKTDSILERLSRRIVANPSKRYPSIFKETSLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC71</accession>
    <name>A0A0D5ZC71_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886224.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44340">
        <property type="protein sequence ID" value="AKA44340"/>
        <property type="gene ID" value="PPSC2_26020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5473"/>
    <dbReference type="HOGENOM" id="CLU_677648_0_0_9"/>
    <dbReference type="OrthoDB" id="1901788at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="406" mass="47568" checksum="1390DF91D12BE766" modified="2015-05-27" version="1">MKDFAELSQMVKRSLEIGMGLPRDPQEPQDIFELVKRKSEIQKINQFLFKNETFQEYVEKNDLHQAGEFLDVDIRFRSTQKGFRFSASKFMVCTVENESDIYKLVIPLSKENSELYLYGVVSLIEPSRMLEWTEYGFVSKSKLSKKEVRVHNKFAYSLEKGKNGVKEITAQEYFYLCLLEDAALSFFSKINNWRLEKANLNTKQLHLLRIWSVMKTDCYSQNYISISKPSEIVPICEEWEDVKMFMDWAINNGYKDEIVMKRRDLLREYSPSNCYFVSENDRNFLAERYYWHYYNHFFYAASEISKTPVVVNGVERPLLEWAKICNIPGHIIIGRVYSGLSDEDLIAPVIKKPQTSMTKAITIDGVTKSAKEWAKITGIPEKTIISRLRYNWSGTDLIQPSGYRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC91</accession>
    <name>A0A0D5ZC91_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44194">
        <property type="protein sequence ID" value="AKA44194"/>
        <property type="gene ID" value="PPSC2_05520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1122"/>
    <dbReference type="HOGENOM" id="CLU_2772060_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="8039" checksum="A814F271038A9AEA" modified="2015-05-27" version="1">MISKGYLIQIQCTQCKIIYCELEDRVIKSIQQNGQAAMSKGGLYPTFSHLLQTDCFLYLKIYIHIRRLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCF3</accession>
    <name>A0A0D5ZCF3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Lin0212</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">lin0212</name>
        <name evidence="8" type="ORF">PPSC2_12905</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GRP transporter (TC 2.A.7.5) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44251">
        <property type="protein sequence ID" value="AKA44251"/>
        <property type="gene ID" value="PPSC2_12905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2750"/>
    <dbReference type="HOGENOM" id="CLU_076024_1_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015144">
        <property type="term" value="F:carbohydrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010651">
        <property type="entry name" value="Sugar_transport"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06800">
        <property type="entry name" value="Sugar_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AKA44251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="11658" checksum="2879581C59CF05FC" modified="2015-05-27" version="1">MDFITTFIPAVGWGVMPILAYMTKASPREQLTGTVIGAVLFALCVYINHPASLAPISFVVSFISGIFWAAGQLLHFRSFQKVSVSIAIPVICGLQLIGTTLFAALILGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCK8</accession>
    <name>A0A0D5ZCK8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spermidine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_22720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886060.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10235"/>
    <dbReference type="EnsemblBacteria" id="AKA44319">
        <property type="protein sequence ID" value="AKA44319"/>
        <property type="gene ID" value="PPSC2_22720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4811"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111226_4_0_9"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="9"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="18025" checksum="3EC491AA0366CAD4" modified="2015-05-27" version="1">MYRRNPNIITLKAVDKRNWEECAELEPSPEQQRFMVSNLYSIAECQFLDGFVSKAIYNDDVLIGFTMFGKDPDDGNYWVYRFMIDERFQGQGHGYNAMLLVIDEIRKASDRTDMIMIGYKPDNELARKLYRKSGFREEGISPWGEMLAKYRFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCN5</accession>
    <name>A0A0D5ZCN5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0150"/>
    <dbReference type="EnsemblBacteria" id="AKA44378">
        <property type="protein sequence ID" value="AKA44378"/>
        <property type="gene ID" value="PPSC2_27375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5794"/>
    <dbReference type="HOGENOM" id="CLU_094922_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="20756" checksum="E0A7A49B7AC6C517" modified="2015-05-27" version="1">MIRKGGASVVRELLFQKQHLSLTHQLRKNNKGSLALEVVVGCFVFLIVLCFLVDVTMLGWRFAVVSQTNSYIARTVGLQGGVLSSAPDGFPGGNAAYVSTSELANNIAKNFKSGGIENGEYTVTINGVPLGSGVKVDYREYLHVETKVKYKWAMVSNFIPGNIENWISSKRSVMSEFKYRYDYWIGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4F4</accession>
    <name>E3E4F4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ltaA</name>
        <name evidence="9" type="ORF">PPSC2_12765</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56694.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599783.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2727"/>
    <dbReference type="EnsemblBacteria" id="ADO56694">
        <property type="protein sequence ID" value="ADO56694"/>
        <property type="gene ID" value="PPSC2_12765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2718"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054518_0_0_9"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="46"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="102"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="134"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="162"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="244"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="274"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="300"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="336"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="363"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="207"/>
            <end position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56694.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="408" mass="44005" checksum="2AB872BE2FD105A9" modified="2015-05-27" version="2">MMSGRSAFKLSTLMLFTVLFCTEFVRSAFLFSFLPNFAVNESGQTVALVGLAVSLHYTADTLIKCVAGYLLDRFSLRWLLPATFVLMLSGLAAVFVSPYAWGLVAGSVMLGMGASPIWLICLEKIRLTERAAQIGAIYTVWLACIGLGPITINLTFDYGFVPAFRLMAALLAVGCIASFGINRTTPLHLQNVSFAEQATRLRRRLVQLKWLLPGMVLQMTAAGLLLPILPGFAADHLGLSQPQYSIMLIFGGAGAMLFLVPMGKLADRWGHKQMLFAGFVSLTVILALLIVSMPPPALTMLFAFMLGLSYSAVLPAWNAVLSYLVPEDQKGTGWGVLSGIEGLGIMIGPVIGGWIASQYTNEAAISISAALLAVLALFYLILPQNKLVSARGTLQHKRENAHGPDRVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G3</accession>
    <name>E3E4G3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplC9</name>
        <name evidence="7" type="ORF">PPSC2_12810</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371307.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00405"/>
    <dbReference type="EnsemblBacteria" id="ADO56703">
        <property type="protein sequence ID" value="ADO56703"/>
        <property type="gene ID" value="PPSC2_12810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2727"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="YGVSFWN"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="79"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="265"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="71"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="32522" checksum="1CB69A7A0B6EF4F9" modified="2011-01-11" version="1">MSYSVSQKNRIGGLVIYAIVILLALICLLPLWNIVAISFSSSEAVSANAVGLVPVNFTTAAYTKIIDDAQFWRSFGISVLRVVLTLLLNMILIVLMAYPLSKSKREFKGRNIYMNVMIFAMLFSGGMIPSYLLIKNLDMLNTIWSLVLPGAVPIFSVILVMNFFSAVPKALEEAAFIDGASPLQVLFKVYVPVSIPALATVALFSIVGTWNDFFSGLIYMTQVSNYPLMTYIQSLNVNIAELLQSGTNSAQLSNLTEISNKNLNAAKIVVAVIPLLLIYPLLQKYFVTGIVVGSVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4T1</accession>
    <name>E3E4T1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371657.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02170"/>
    <dbReference type="EnsemblBacteria" id="ADO57059">
        <property type="protein sequence ID" value="ADO57059"/>
        <property type="gene ID" value="PPSC2_14515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3097"/>
    <dbReference type="eggNOG" id="ENOG503124W">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045083_0_0_9"/>
    <dbReference type="OMA" id="RFWLRLY"/>
    <dbReference type="OrthoDB" id="973719at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="369" mass="43116" checksum="800CA485BAA1DA93" modified="2011-01-11" version="1">MNLADMLTFADIVHLNRIAVYYDCDCKPNSKHELIQGILTKLGSSSFFETQVKELRLSEVRFLNALLFDDRPYFSMEELIAIAKQSVENDGDAGERPRDIVTRLRSSGWLFNGSTHNTRYLYQIPSDMKERFRRVMVYDFQNGMTRVSEPSSYRDEGHLLAEDLRLFLQYMKQHEVLLNPEGAWYRRNQQQLMEHLHIAEPLLGKGGWRFGYGSSFKFYPDRMALLYDYARHSKYIEEKGDRVELTAKGEAQQELAIEDEMIQLFRFWLRLYKGAVPNLLSLVYWIGECARPWTSSESLFVHIGPLIRPFYYDTPRSVFDQRIIRMMLHLGMLRQGEHSTGPSVQMTAWGQKLAGECRLGRNDSGIRLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E595</accession>
    <name>E3E595_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA helicase</fullName>
            <ecNumber evidence="3">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">dnaB3</name>
        <name evidence="11" type="ORF">PPSC2_16380</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the helicase family. DnaB subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57455.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3499"/>
    <dbReference type="EnsemblBacteria" id="ADO57455">
        <property type="protein sequence ID" value="ADO57455"/>
        <property type="gene ID" value="PPSC2_16380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3496"/>
    <dbReference type="eggNOG" id="COG0305">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005373_0_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036185">
        <property type="entry name" value="DNA_heli_DnaB-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007694">
        <property type="entry name" value="DNA_helicase_DnaB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007693">
        <property type="entry name" value="DNA_helicase_DnaB-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016136">
        <property type="entry name" value="DNA_helicase_N/primase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00772">
        <property type="entry name" value="DnaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03796">
        <property type="entry name" value="DnaB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48024">
        <property type="entry name" value="SSF48024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51199">
        <property type="entry name" value="SF4_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 11" id="KW-0347">Helicase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF4 helicase" evidence="10">
        <location>
            <begin position="167"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57455.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="424" mass="47927" checksum="17E0E1304746FFDE" modified="2015-05-27" version="2">MLNTELLEAEILGSFFRDPSLVGEVAVTLEPSLFTQPWHRNLLKMILELHRTEQELSMTMLVTVFEKHLEKVGGISYLSKLASSAIAVSMLEQNIRQLIETDARRKALDLVGEYRDKFLDLSSSGFEELLDEFEQRSLDIRPKALQKDTAVDDIIQWYEDLVLKTQDPSRALGIMTGWSALDRLTLGFQRTNLVVIGARTSMGKSAVANEIKMRATQRGHKVADFSLEMSKAQIYNRMIANLCSIPLQAIRSGHLKPEQIERISMQMEFLRKIHIDDSRGVTAEYICSEMRRLKRQEGLDLVIVDYLQEVVEPAERNDNSGSGLHRVCQKLRKAAKDCDCALIGLSQVKQDVESRQNKRPFVSDLSGSAAISAVADDILLLYRDEYYNPDTPDLGILEINLAKQRNGPTGVVKLKFEKDTQQIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5G4</accession>
    <name>E3E5G4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Aspartate ammonia-lyase</fullName>
            <shortName evidence="6">Aspartase</shortName>
            <ecNumber evidence="3 6">4.3.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">aspA3</name>
        <name evidence="9" type="ORF">PPSC2_17430</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>L-aspartate = fumarate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:16601"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="EC" id="4.3.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the class-II fumarase/aspartase family. Aspartase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.1" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372264.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04770"/>
    <dbReference type="EnsemblBacteria" id="ADO57683">
        <property type="protein sequence ID" value="ADO57683"/>
        <property type="gene ID" value="PPSC2_17430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3724"/>
    <dbReference type="eggNOG" id="COG1027">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021594_4_1_9"/>
    <dbReference type="OMA" id="EAMNQTA"/>
    <dbReference type="OrthoDB" id="734949at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008797">
        <property type="term" value="F:aspartate ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006531">
        <property type="term" value="P:aspartate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004708">
        <property type="entry name" value="ApsA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018951">
        <property type="entry name" value="Fumarase_C_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10415">
        <property type="entry name" value="FumaraseC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00839">
        <property type="entry name" value="aspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lyase_1" evidence="7">
        <location>
            <begin position="9"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="FumaraseC_C" evidence="8">
        <location>
            <begin position="404"/>
            <end position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF10415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="469" mass="51672" checksum="85B7C34E964C9161" modified="2011-01-11" version="1">MRLEHDFLGTKEVPSDAYYGVQTLRAKENFPITGQRLHPELIKAMAIVKKGAATVNMELTRLHRSKAEAIIQAADEIIQGQLHDHFIVDPIQGGAGTSINMNTNEVIANRALELIGKQRGDYQEISPNNHVNMAQSTNDAFPTAVHLAVLSMIDKLLVTMSELQEAFSRKANEFDSVIKMGRTHLQDAVPIRLGQEFQAYARVLGRDIGRVRATKEHLLTINMGATAVGTGLNADRRYIQRVAEVLAEVSGFPVEADEHLVDATQNTDAYTEVSAALKICMMNMSKVANDIRLMASGPRAGLGELSLPARQPGSSIMPGKVNPVMCEVINQIAFQVIGNDHTICLASEAGQLELNVMEPVLVYNLLQSLEIMKQGFHVFRVHCVEGIEANVERCREYVENSVGIITALNPHLGYEVVSRIAREAITTGKSVRELCLLYNVLTEEELDIILDPYQMTQPGIAGESLLNRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5X9</accession>
    <name>E3E5X9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372770.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58198">
        <property type="protein sequence ID" value="ADO58198"/>
        <property type="gene ID" value="PPSC2_19870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4235"/>
    <dbReference type="eggNOG" id="ENOG50305TN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1979366_0_0_9"/>
    <dbReference type="OMA" id="MGYVAFH"/>
    <dbReference type="OrthoDB" id="1836872at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="12338" checksum="FACF4E73E9164E00" modified="2011-01-11" version="1">MGYVAFHHHPHIVGEPLELEKLKKQLLSFFQEHHVLWLELDPLTQYVVVNNMGKATVLKLMGRKINPLRDQRANAALAGQPLHELDREIERLNRLVHLLRYTRFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E626</accession>
    <name>E3E626_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD(P)H nitroreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydgI1</name>
        <name evidence="2" type="ORF">PPSC2_12845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371315.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2744"/>
    <dbReference type="EnsemblBacteria" id="ADO56711">
        <property type="protein sequence ID" value="ADO56711"/>
        <property type="gene ID" value="PPSC2_12845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2735"/>
    <dbReference type="eggNOG" id="COG0778">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070764_4_5_9"/>
    <dbReference type="OMA" id="DRAVEHQ"/>
    <dbReference type="OrthoDB" id="1847197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="18"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="24283" checksum="691008C72E582142" modified="2011-01-11" version="1">MSTSTHTGQSSALFADVIRERRSVRHYDKSVRLSHEEIKDLLKEATLAPSSSNVQPWRFLVIETEELKAKLQPIAYNQSQVTEAAAVIVVLGDTEGYKKLDEVFGEAVKHGYIAEDTAKSFVERSIHTYASLPEETLHKVIHIDGGIVSQQLMLVARAHGYDTVAMGGYNAAELKQSFGISDRYIPIMLIALGKAAQPGHQTTRLPIDDITFFNEMPVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="79" xmlns="http://uniprot.org/uniprot">
    <accession>E3E681</accession>
    <name>E3E681_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Potassium transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cvrA</name>
        <name evidence="6" type="ORF">PPSC2_13125</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371370.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2800"/>
    <dbReference type="EnsemblBacteria" id="ADO56766">
        <property type="protein sequence ID" value="ADO56766"/>
        <property type="gene ID" value="PPSC2_13125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2794"/>
    <dbReference type="eggNOG" id="COG3263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005912_9_2_9"/>
    <dbReference type="OMA" id="QIGMFVL"/>
    <dbReference type="OrthoDB" id="1194802at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005451">
        <property type="term" value="F:monovalent cation:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030151">
        <property type="entry name" value="NhaP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006037">
        <property type="entry name" value="RCK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32507:SF7">
        <property type="entry name" value="PTHR32507:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02080">
        <property type="entry name" value="TrkA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51202">
        <property type="entry name" value="RCK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="95"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="120"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="180"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="218"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="270"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="295"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="331"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="363"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="5">
        <location>
            <begin position="400"/>
            <end position="481"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="488" mass="53129" checksum="F28D367B5477B812" modified="2011-01-11" version="1">MEQTTVINLIVLLLSGLLLVGVLTTKFSSRFGMPALVLFIAVGMVLSQFIYFDNAFITQLVGILALIVILFEGGMQTKFADVKPVIRPALSLSTLGVIITTVVIGVCAKFILGVSWMESMLFGAIVGSTDAAAVFSVLGGKNIKKRITSTLEAESGSNDPMAVFLTVTLIELIHHPEQSIWIHILLFLWEMGFGLAVGFVLGRLGVYAINKMNFDSSGLYPVMALAFAVLTYAAASLLEASGLLAVYVMAIVLGNSDLTYKRSIIHFNNGFAWMVQIMMFVLLGLLVFPDQLLGIAWQSLALSFILMLVARPIGVFLSLLFSRYSVREKTLLSWAGLRGAVPIVLATYPLLDEMDVGPLFFNVVFFVVLTSAIIQGTTISWLAVKLGLMDPNETSSPSLLELVSLGKTTSEINHIQVQKGMSIAGKAIQDIQLPEDILFTAIIRDEQIIAPRGTTVIEPGDTLYVLSPKLKRQQMKELFMLLEPEAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D3</accession>
    <name>E3E6D3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphocarrier protein HPr</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ptsH</name>
        <name evidence="7" type="ORF">PPSC2_18875</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372579.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06085"/>
    <dbReference type="EnsemblBacteria" id="ADO58002">
        <property type="protein sequence ID" value="ADO58002"/>
        <property type="gene ID" value="PPSC2_18875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4046"/>
    <dbReference type="eggNOG" id="COG1925">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_136230_2_1_9"/>
    <dbReference type="OMA" id="TINIICE"/>
    <dbReference type="OrthoDB" id="404807at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00367">
        <property type="entry name" value="PTS-HPr_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000032">
        <property type="entry name" value="HPr-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035895">
        <property type="entry name" value="HPr-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001020">
        <property type="entry name" value="PTS_HPr_His_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002114">
        <property type="entry name" value="PTS_HPr_Ser_P_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00381">
        <property type="entry name" value="PTS-HPr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00107">
        <property type="entry name" value="PHOSPHOCPHPR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55594">
        <property type="entry name" value="SSF55594"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01003">
        <property type="entry name" value="PTS_HPr_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51350">
        <property type="entry name" value="PTS_HPR_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00369">
        <property type="entry name" value="PTS_HPR_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00589">
        <property type="entry name" value="PTS_HPR_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HPr" evidence="6">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="9495" checksum="70D924310DEFBC7D" modified="2011-01-11" version="1">MQTTFRITDEDGIHARPATALVNTANKFSGAESFAEANGKKVTLKSILGVLSLGLEQGDTINIICEGAEAAEALKALENVIVNEGLGEVHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6J1</accession>
    <name>E3E6J1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nucleoside-diphosphate sugar epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rmd</name>
        <name evidence="3" type="ORF">PPSC2_20115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372823.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4301"/>
    <dbReference type="EnsemblBacteria" id="ADO58251">
        <property type="protein sequence ID" value="ADO58251"/>
        <property type="gene ID" value="PPSC2_20115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4287"/>
    <dbReference type="eggNOG" id="COG0451">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_1_7_9"/>
    <dbReference type="OMA" id="WQSPLLY"/>
    <dbReference type="OrthoDB" id="955232at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="13"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="342" mass="37428" checksum="45977205A6A2598E" modified="2011-01-11" version="1">MDRSTAEQRRPVIVITGAAGYTGMHACLYFAQLGWEVAALTRTAASASKLTSLAGDDEYPSPDVGTHVCITPYVCDLLDKKRLGEVIRQIAPDYVLHLGGKNSVPESWQSPLLYMESNVLSTLYLLDVLRPFPKVRIVVAGSRLKTALQAPYYPPHPYSLSKSLQEAVALSWGALFDQSVMLAEPCNLIGPGPSTGFCALLAGYIARTEQSVRDVQNVEPPALASVSAPTPFQVSSRHALRDFLDVRDAVRAYSVLLERGVPGRVYPVCSGKMMQLGDIVERMIALADTPVAIQWGDVTEEASTDVYQPKELEELGWMPTIPLGQSLKDMIGYSRARKEETR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R1</accession>
    <name>E3E6R1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pcaD</name>
        <name evidence="2" type="ORF">PPSC2_21170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373032.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08400"/>
    <dbReference type="EnsemblBacteria" id="ADO58463">
        <property type="protein sequence ID" value="ADO58463"/>
        <property type="gene ID" value="PPSC2_21170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4500"/>
    <dbReference type="eggNOG" id="COG2267">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_50_4_9"/>
    <dbReference type="OMA" id="ESYLMHD"/>
    <dbReference type="OrthoDB" id="1196738at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="21"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="28537" checksum="92AB042B6312B868" modified="2011-01-11" version="1">MEKVLCEGTTICYAEQGKGDPIILLHGFCGSSSYWDEVVPLLSPSYRCIVPDLRGHGRSDAPLGAYTIDQMADDVLKLQEQLDIPQAAWFGHSLGGYLALSAVQRHAERLTAFGLIHSTAYADTDEGKEKRNKAVSTIQTEGITTFVDGLVPGLFAPEHVESMPNQLLKVKEIGYKTPPQGAVGASLAMRERPDRRDVLSASALPALLVAGEQDQAVPPARTFTTDRTGVTQVTLPQSGHMSLIEAPQLLANAILSFLDQNLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Z3</accession>
    <name>E3E6Z3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Translation initiation factor IF-1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">infA</name>
        <name evidence="5" type="ORF">PPSC2_22315</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the IF-1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_006212898.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09780"/>
    <dbReference type="EnsemblBacteria" id="ADO58695">
        <property type="protein sequence ID" value="ADO58695"/>
        <property type="gene ID" value="PPSC2_22315"/>
    </dbReference>
    <dbReference type="GeneID" id="66575604"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4732"/>
    <dbReference type="eggNOG" id="COG0361">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_151267_1_0_9"/>
    <dbReference type="OMA" id="AHVSGKM"/>
    <dbReference type="OrthoDB" id="2066663at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04451">
        <property type="entry name" value="S1_IF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00075">
        <property type="entry name" value="IF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006196">
        <property type="entry name" value="RNA-binding_domain_S1_IF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004368">
        <property type="entry name" value="TIF_IF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33370">
        <property type="entry name" value="PTHR33370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01176">
        <property type="entry name" value="eIF-1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00008">
        <property type="entry name" value="infA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50832">
        <property type="entry name" value="S1_IF1_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2 3" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2 3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="S1-like" evidence="4">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="71" mass="8044" checksum="D221AF4A011A78E8" modified="2011-01-11" version="1">MAKEDVIEVEGTVIEPLPNATFKVELENGHQILAHVSGKLRMHFIRILTGDKVVVQLSPYDLTKGRITYRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E717</accession>
    <name>E3E717_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">50S ribosomal protein L4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">rplD</name>
        <name evidence="8" type="ORF">PPSC2_22430</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Forms part of the polypeptide exit tunnel.</text>
    </comment>
    <comment type="function">
        <text evidence="6">One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 6">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the universal ribosomal protein uL4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013312160.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09895"/>
    <dbReference type="EnsemblBacteria" id="ADO58719">
        <property type="protein sequence ID" value="ADO58719"/>
        <property type="gene ID" value="PPSC2_22430"/>
    </dbReference>
    <dbReference type="GeneID" id="66575581"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4755"/>
    <dbReference type="eggNOG" id="COG0088">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041575_5_0_9"/>
    <dbReference type="OMA" id="PQVHILE"/>
    <dbReference type="OrthoDB" id="1572673at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01328_B">
        <property type="entry name" value="Ribosomal_L4_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002136">
        <property type="entry name" value="Ribosomal_L4/L1e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023574">
        <property type="entry name" value="Ribosomal_L4_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013005">
        <property type="entry name" value="Ribosomal_uL4/L1e"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10746">
        <property type="entry name" value="PTHR10746"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00573">
        <property type="entry name" value="Ribosomal_L4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52166">
        <property type="entry name" value="SSF52166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03953">
        <property type="entry name" value="rplD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="49"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="49"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="22358" checksum="45DD85F184F97095" modified="2011-01-11" version="1">MPKVALFNISGSQVGEIELNDAVFGIEPNKHVLHDAVVMQLASLRQGTHKVKGRSEVRGGGRKPWKQKGTGRARQGSIRAPQWVGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVIENEIIVLDALTLNGPKTKEFAAILNNLKADRKALIVAPSYDDNVALSARNIPGVKFVAADGINVLDVLGHDKLIITKEAVQKVEEVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E745</accession>
    <name>E3E745_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">ATP synthase subunit c</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">ATP synthase F(0) sector subunit c</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">F-type ATPase subunit c</fullName>
            <shortName evidence="13">F-ATPase subunit c</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Lipid-binding protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 15" type="primary">atpE</name>
        <name evidence="15" type="ORF">PPSC2_23270</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12 13">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="function">
        <text evidence="13">Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cell membrane</location>
            <topology evidence="13">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the ATPase C chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373437.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10760"/>
    <dbReference type="EnsemblBacteria" id="ADO58900">
        <property type="protein sequence ID" value="ADO58900"/>
        <property type="gene ID" value="PPSC2_23270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4927"/>
    <dbReference type="eggNOG" id="COG0636">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_148047_1_1_9"/>
    <dbReference type="OMA" id="QPELMNE"/>
    <dbReference type="OrthoDB" id="2078221at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01396">
        <property type="entry name" value="ATP_synth_c_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005953">
        <property type="entry name" value="ATP_synth_csu_bac/chlpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000454">
        <property type="entry name" value="ATP_synth_F0_csu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020537">
        <property type="entry name" value="ATP_synth_F0_csu_DDCD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038662">
        <property type="entry name" value="ATP_synth_F0_csu_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002379">
        <property type="entry name" value="ATPase_proteolipid_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035921">
        <property type="entry name" value="F/V-ATP_Csub_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10031">
        <property type="entry name" value="PTHR10031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00137">
        <property type="entry name" value="ATP-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00124">
        <property type="entry name" value="ATPASEC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81333">
        <property type="entry name" value="SSF81333"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01260">
        <property type="entry name" value="ATP_synt_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00605">
        <property type="entry name" value="ATPASE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 13" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="13" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 13" id="KW-0138">CF(0)</keyword>
    <keyword evidence="6 13" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="8 13" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 13" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 13" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="48"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_C" evidence="14">
        <location>
            <begin position="7"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="site" description="Reversibly protonated during proton transport" evidence="13">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO58900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="7395" checksum="59CA234C58EE0547" modified="2011-01-11" version="1">MGAWALIAAAIAVGLGALGAGIGNGLIVSKTVEGIARQPEAKSTLQTIMFIGVGLVEALPIIGVVLAFIFYAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7E1</accession>
    <name>E3E7E1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373686.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5215"/>
    <dbReference type="EnsemblBacteria" id="ADO59152">
        <property type="protein sequence ID" value="ADO59152"/>
        <property type="gene ID" value="PPSC2_24440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5176"/>
    <dbReference type="eggNOG" id="ENOG50307NZ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2718571_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="72" mass="8357" checksum="2DE5D9BB64543609" modified="2011-01-11" version="1">MKMALRKKLACLIVLGGDKEPYKLPDKPKEAAVSTFSEYMNASMSRDYDKMLSLSDDYRFKTERTRLNFLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7I2</accession>
    <name>E3E7I2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YetN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yetN</name>
        <name evidence="2" type="ORF">PPSC2_13225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371391.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00900"/>
    <dbReference type="EnsemblBacteria" id="ADO56787">
        <property type="protein sequence ID" value="ADO56787"/>
        <property type="gene ID" value="PPSC2_13225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2815"/>
    <dbReference type="eggNOG" id="ENOG502Z81V">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065093_0_0_9"/>
    <dbReference type="OMA" id="QVPTKIG"/>
    <dbReference type="OrthoDB" id="565262at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025012">
        <property type="entry name" value="DUF3898"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025006">
        <property type="entry name" value="DUF3900"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13037">
        <property type="entry name" value="DUF3898"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13039">
        <property type="entry name" value="DUF3900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3898" evidence="1">
        <location>
            <begin position="262"/>
            <end position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="42522" checksum="8438468CA5F4706A" modified="2011-01-11" version="1">MNFQVDFLSFFVIQVDGKEGQGGKSYKHYATMDDYDYDESDVKKFLDGEFARISKRKVEKNPSTEQAPTKIGRFIVEPEHELSSNPNFNMFARLRAAEDKEDFKNACDDLVRMYLDTSAVRGGALIIVQATLNTHSDDPFIFVLKCDFEPKIARITESSLVSEVEMAISARNMKSIMYPYMLEEGMNDEWELKIHQSSHARYFEDFLKFVTYEQSMPEIVNEHVMGFVQNYVETKWPDASNEERQQEERDLELWAASEKRDLQGKWEPLQVVEAAQHIVELKPEIEVRFKLDDTAVRGLLSDFGAKLHITKLHDRYALIIEGDAFTFEKGFSPIELLQPESFETVAERLKEKRQHENEGVDGDTPPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7S0</accession>
    <name>E3E7S0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ywqM</name>
        <name evidence="3" type="ORF">PPSC2_13995</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371553.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01650"/>
    <dbReference type="EnsemblBacteria" id="ADO56953">
        <property type="protein sequence ID" value="ADO56953"/>
        <property type="gene ID" value="PPSC2_13995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2989"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="KQCVIAD"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="298" mass="33852" checksum="A50BD780583C3858" modified="2011-01-11" version="1">MESRHLFTFINVVEAGSFTRAARILDYAQSSITAQIQTLETELGTPLFDRIGKKIMLTDAGRRLLPYAQEISKMHAMAKDALRSETELAGTLKIGAPESLAAFRLPSLIREYRERYPKVKIVLKPGECWELRDLIRSGELDLAFLLQPETEDRELNITTLIHEPMALVAPLKHSLVAYTQVEPADLKDETILHTEAGCTYRILFEQYLNKHGIFADPSLEFWSIEAIKQCVMAGLGIALLPLVTVQNELREGKMARLAWDDSEQQVATQVAYHTKKWKSPALSEFLQIVEQYVTHWRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7S4</accession>
    <name>E3E7S4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Spermidine/putrescine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ytlC</name>
        <name evidence="5" type="ORF">PPSC2_14015</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371557.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01670"/>
    <dbReference type="EnsemblBacteria" id="ADO56957">
        <property type="protein sequence ID" value="ADO56957"/>
        <property type="gene ID" value="PPSC2_14015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2993"/>
    <dbReference type="eggNOG" id="COG1116">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="QSIVTFP"/>
    <dbReference type="OrthoDB" id="1832232at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="17"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="53"/>
            <end position="60"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="29935" checksum="9378BECF2BC9E292" modified="2011-01-11" version="1">MTEEQSGLTADVTIPMVRMEQVTHVYVTDREASLAVENIDFSVNTGEFVSLVGPSGCGKTTILSMIAGLLRPAAGQVMLQGQPVSGPSPEVGYMLQQDYLFPWRTIMDNALLGLELSNRVDEAARERTRLLLEGMGLGGKEHLHPSQLSGGMRQRVALVRTLATNPGLLLLDEPFSALDYQTKLQLEDLVVQTLRERKKTAILVTHDLAEAIAVSDRVIVMGRNPGHIRRTFEIPDSIREAQPFYAREQPGFNELFHEIWRELEASGAKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y5</accession>
    <name>E3E7Y5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glutamate 5-kinase</fullName>
            <ecNumber evidence="8">2.7.2.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Gamma-glutamyl kinase</fullName>
            <shortName evidence="8">GK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">proB</name>
        <name evidence="10" type="ORF">PPSC2_14310</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + L-glutamate = ADP + L-glutamyl 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:14877"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58274"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8">Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-glutamate: step 1/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the glutamate 5-kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.11" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57018.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599974.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01965"/>
    <dbReference type="EnsemblBacteria" id="ADO57018">
        <property type="protein sequence ID" value="ADO57018"/>
        <property type="gene ID" value="PPSC2_14310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3055"/>
    <dbReference type="eggNOG" id="COG0263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025400_2_0_9"/>
    <dbReference type="OrthoDB" id="1480250at2"/>
    <dbReference type="UniPathway" id="UPA00098">
        <property type="reaction ID" value="UER00359"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
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        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="term" value="F:ATP binding"/>
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        <property type="term" value="F:glutamate 5-kinase activity"/>
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        <property type="term" value="P:L-proline biosynthetic process"/>
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        <property type="entry name" value="AceGlu_kinase-like_sf"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01472">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000729">
        <property type="entry name" value="GK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00474">
        <property type="entry name" value="GLU5KINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="PROSITE" id="PS00902">
        <property type="entry name" value="GLUTAMATE_5_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 8" id="KW-0641">Proline biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PUA" evidence="9">
        <location>
            <begin position="308"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="200"/>
            <end position="201"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="242"/>
            <end position="248"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57018.2"/>
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    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="401" mass="43718" checksum="185F5001628A3946" modified="2015-05-27" version="2">MKVVPRKHKLSSFAYKGWKFFCIKKSKIKEVDVLSTRIVIKIGSSSLTGVEGGLNREAIAYFAREISLLRAKGHEVLLVTSGAVAAGFREIGYPFRPKLLHEKQAAAAVGQALLMQAYEQAFKNFDLVIAQVLLTRSDFLSRKRMNNAGMTVEELLRQQVIPIFNENDTVSIDELKFGDNDMLSALVANLVKAQHLIIITDTDGVYTADPRKHPNAVRFERIEEITEEIYALAGGSGSAVGTGGMRSKIEAAKVATRGGVPVYVGRVSANGDLNAAVEGHGPGTYFDTHLSSLPMKKQWLGFMSTPLGSVHVDQGAEEALVHGGHSLLPVGVRRVEGSFHAGDVVEVLGPENKVLGRGIVNYDDEQLRMVQGLPSGEVVGKIGPIHRLEVIHRDEWITLCM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E859</accession>
    <name>E3E859_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidase S55</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spoIVB</name>
        <name evidence="4" type="ORF">PPSC2_15035</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57173.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02655"/>
    <dbReference type="MEROPS" id="S55.001"/>
    <dbReference type="EnsemblBacteria" id="ADO57173">
        <property type="protein sequence ID" value="ADO57173"/>
        <property type="gene ID" value="PPSC2_15035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3209"/>
    <dbReference type="eggNOG" id="COG0265">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035713_1_0_9"/>
    <dbReference type="OrthoDB" id="1237700at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041489">
        <property type="entry name" value="PDZ_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014219">
        <property type="entry name" value="Pept_S55_SpoIVB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008763">
        <property type="entry name" value="Peptidase_S55"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17820">
        <property type="entry name" value="PDZ_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05580">
        <property type="entry name" value="Peptidase_S55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02860">
        <property type="entry name" value="spore_IV_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51494">
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0720">Serine protease</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168927" evidence="2">
        <location>
            <begin position="30"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S55" evidence="3">
        <location>
            <begin position="141"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57173.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="41525" checksum="9FD273FEF3060AFE" modified="2015-05-27" version="2">MNFYSRIKLLGLLLVFLMCSLGNAHHVQAALPLQASLDLFGTKSMQTTQESVVPDLKVYPGGQTIGVKVKSSGVLVVGHHIIQESNDRKVSPGETAGIRLGDRITHMNGKPLNSLARVAEAVDEAGKNKKPLDITLCRGEQTISTKLTPAYDQDDKAWRLGLYIRDSAAGVGTLTFYAPDQGVYGALGHVITDMNTQTPIVVGSGEIVQSNVTSIAKSQSGEPGEKRAHFLKDHRILGNIERNTSFGIFGKMSDEPQNGLYSAPIPVGLANEVKEGPAEILTVLEGQQIQRFQAEIVHISQQDKPATKGLVIRVVDPKLLDKTGGIVQGMSGSPIIQNGKLIGAVTHVFVNDPKSGYGCFIEWMLRDAGIMHNKLSLKSSSNLKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E871</accession>
    <name>E3E871_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stress-induced protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yloC</name>
        <name evidence="3" type="ORF">PPSC2_15470</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371852.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03120"/>
    <dbReference type="EnsemblBacteria" id="ADO57263">
        <property type="protein sequence ID" value="ADO57263"/>
        <property type="gene ID" value="PPSC2_15470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3305"/>
    <dbReference type="eggNOG" id="COG1561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076609_1_0_9"/>
    <dbReference type="OMA" id="EIKSVNH"/>
    <dbReference type="OrthoDB" id="1509828at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005229">
        <property type="entry name" value="CHP00255"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013551">
        <property type="entry name" value="DUF1732"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013527">
        <property type="entry name" value="YicC-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30636">
        <property type="entry name" value="PTHR30636"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08340">
        <property type="entry name" value="DUF1732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03755">
        <property type="entry name" value="YicC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00255">
        <property type="entry name" value="TIGR00255"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YicC_N" evidence="1">
        <location>
            <begin position="4"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1732" evidence="2">
        <location>
            <begin position="212"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="34112" checksum="372DAC1E25E7AD0D" modified="2011-01-11" version="1">MSLSMTGYGQAILHHKGYKVRLELKSVNHRYCEVMMRIPREWTQYEDGLRRTVQQQIKRGRIDVFIHRERDEEQIPAARLNDTVVQAYLRAAEQLADRYGVKGTLGISDILALPDVLGEPGEACNGDEEDWEEHLQRALNEALQGLLEMRRREGGHLAQDVESRILRLESFHHEMTVLAPHVVSDYRNRLKHRLKELQDGSFTLDEHKFGMEIALFADRSNIDEELTRLQSHFGQCKRLLLSDEPAGRKLDFLIQEMNREVNTIGSKANHLTLVNLVVEMKAELEKIREQAANIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E874</accession>
    <name>E3E874_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Diaminopimelate epimerase</fullName>
            <shortName evidence="8">DAP epimerase</shortName>
            <ecNumber evidence="4 8">5.1.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">PLP-independent amino acid racemase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">dapF</name>
        <name evidence="10" type="ORF">PPSC2_15485</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>(2S,6S)-2,6-diaminoheptanedioate = meso-2,6-diaminoheptanedioate</text>
            <dbReference type="Rhea" id="RHEA:15393"/>
            <dbReference type="ChEBI" id="CHEBI:57609"/>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
            <dbReference type="EC" id="5.1.1.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; DL-2,6-diaminopimelate from LL-2,6-diaminopimelate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the diaminopimelate epimerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.7" evidence="4 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371855.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03135"/>
    <dbReference type="EnsemblBacteria" id="ADO57266">
        <property type="protein sequence ID" value="ADO57266"/>
        <property type="gene ID" value="PPSC2_15485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3308"/>
    <dbReference type="eggNOG" id="COG0253">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053306_3_0_9"/>
    <dbReference type="OMA" id="HVAMRVH"/>
    <dbReference type="OrthoDB" id="1921631at2"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00025"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008837">
        <property type="term" value="F:diaminopimelate epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00197">
        <property type="entry name" value="DAP_epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018510">
        <property type="entry name" value="DAP_epimerase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001653">
        <property type="entry name" value="DAP_epimerase_DapF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31689">
        <property type="entry name" value="PTHR31689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01678">
        <property type="entry name" value="DAP_epimerase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00652">
        <property type="entry name" value="DapF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01326">
        <property type="entry name" value="DAP_EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 8" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="72"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="212"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="222"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="161"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Could be important to modulate the pK values of the two catalytic cysteine residues" evidence="8">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <feature type="site" description="Could be important to modulate the pK values of the two catalytic cysteine residues" evidence="8">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="30384" checksum="B40CDC58013046C0" modified="2011-01-11" version="1">MEFTKMNGLGNDFIVWYGHQELPSDASELAVRLCDRHFGIGADGLVYILPSDKADFRMRIINSDGSEAEQCGNAIRCAAKYVYDRKHINREQITIETLGAGVQQVELTVENGAVRMVKVDMGEPILEGLKIPTTLDLTNVIDEPIEAGGSGFRFTAVSMGNPHCVIYVEDAPSFDLEAWGPKLECHPLFPKKTNVEFATVRSRKHIDMRVWERGAGPTLACGTGACATLVASVLNGYSDRRAMVSLKGGDLDIEWSEDDNHIYMTGPAEIVFEGRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E885</accession>
    <name>E3E885_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase M20</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhaA3</name>
        <name evidence="2" type="ORF">PPSC2_15540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371866.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03190"/>
    <dbReference type="EnsemblBacteria" id="ADO57277">
        <property type="protein sequence ID" value="ADO57277"/>
        <property type="gene ID" value="PPSC2_15540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3319"/>
    <dbReference type="eggNOG" id="COG1473">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023257_0_1_9"/>
    <dbReference type="OMA" id="GLHNAPE"/>
    <dbReference type="OrthoDB" id="796259at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017439">
        <property type="entry name" value="Amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11014">
        <property type="entry name" value="PTHR11014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005962">
        <property type="entry name" value="Pept_M20D_amidohydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01891">
        <property type="entry name" value="amidohydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="1">
        <location>
            <begin position="190"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="401" mass="43710" checksum="5533C5C58A7E1029" modified="2011-01-11" version="1">MTQQAMDQTWFDQLQENMVEWRRHLHKNPEISFQESKTAAFVADKLESWGLDVRRQVGGHGVVGTIRGAKPGPVVMLRADMDALPIQDEKECEYRSIVDGAMHACGHDGHTSVLLGTAYYYSLNRDELEGEIRFLFQPAEELLPGGAVNVIKDGVLEGVDVIYGIHLWTPFSVGTAASCAGPLMAAADDFYIEIAGKGGHGGMPQSTNDSVVAGSALVMQLQSIVSRSVDPLRPAVLTVGTIEGGSAQNIIAETCRLSGTIRTFDEQTRTVMKERLHEVTELTAATYGTSAKIRYIMGYPPVVNDAREAARFFKEAKPVFGEGNVQEAPKLMPAEDFAYYLERVPGCFMFVGAGNPAKGAIYPHHHPKFDFDEDAMINAVRLFIAMSTGYAAECKEGAING</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8C6</accession>
    <name>E3E8C6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Anthranilate phosphoribosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_15740</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371904.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03435"/>
    <dbReference type="EnsemblBacteria" id="ADO57318">
        <property type="protein sequence ID" value="ADO57318"/>
        <property type="gene ID" value="PPSC2_15740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3359"/>
    <dbReference type="eggNOG" id="COG0547">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034315_0_0_9"/>
    <dbReference type="OMA" id="AMRIKGE"/>
    <dbReference type="OrthoDB" id="1238435at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004048">
        <property type="term" value="F:anthranilate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005940">
        <property type="entry name" value="Anthranilate_Pribosyl_Tfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000312">
        <property type="entry name" value="Glycosyl_Trfase_fam3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017459">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036320">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035902">
        <property type="entry name" value="Nuc_phospho_transferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43285">
        <property type="entry name" value="PTHR43285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02885">
        <property type="entry name" value="Glycos_trans_3N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00591">
        <property type="entry name" value="Glycos_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47648">
        <property type="entry name" value="SSF47648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52418">
        <property type="entry name" value="SSF52418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 7" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_trans_3N" evidence="6">
        <location>
            <begin position="5"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_3" evidence="5">
        <location>
            <begin position="94"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="357" mass="39756" checksum="7E02171BD42F864A" modified="2011-01-11" version="1">MNIIEILKEVGRGKRGARDLNYAEAEAAAELIMTRSATPAQIGAFFAAERIKMESVDELEAFVNVCRKYSHHFPMEEGIDFAGPYDGRKSSFIATFATAFLLSSYGIPVTMHGSAPLPPKWGVTLPLLLQEMGVATADITHETAIHAAKQTGVLFVVSEQWCPPLRDLRPIREELGLRTVLNTAEKLVDYGSSPYIVFGVFHNTVFDKTAKVMQNLNYRRALIIQGSEGSEDLFIDRPTRTYLFANGEVSLQVIDPEMYGLDSVVPEHNWTPAEQLRISEEVLQGTAPTAFSNQVLLNGAVRLFVAGRVDSIEEGLYTCKPLLENGEAWDLYCRWREAMLRKEIKTGVGTSETRSYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8N8</accession>
    <name>E3E8N8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372327.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3793"/>
    <dbReference type="EnsemblBacteria" id="ADO57747">
        <property type="protein sequence ID" value="ADO57747"/>
        <property type="gene ID" value="PPSC2_17730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3790"/>
    <dbReference type="eggNOG" id="ENOG5032RHC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1584115_0_0_9"/>
    <dbReference type="OMA" id="ERERIHY"/>
    <dbReference type="OrthoDB" id="1867523at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="170" mass="20618" checksum="8D55C0DCE52103F3" modified="2011-01-11" version="1">MMTNNDYKLQVEKELGKELKEIMYEYCVEKDLIPAEISSILNVPKNTIIQWRNQFRFGPQQRAADSSRLIRQKGINDYKNELQNIDFNREFDFKEHSLSGFKELIERFLELEKYRRTIINSNALADMSVMIRIESLNEMLGYLNDYEENQLYKRYEQEIQNLEMYKDLYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8U9</accession>
    <name>E3E8U9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Molybdenum transport system permease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cysT3</name>
        <name evidence="10" type="ORF">PPSC2_18015</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57808.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886027.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05335"/>
    <dbReference type="EnsemblBacteria" id="ADO57808">
        <property type="protein sequence ID" value="ADO57808"/>
        <property type="gene ID" value="PPSC2_18015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3850"/>
    <dbReference type="eggNOG" id="COG4149">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_14_3_9"/>
    <dbReference type="OrthoDB" id="1915735at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015098">
        <property type="term" value="F:molybdate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011867">
        <property type="entry name" value="ModB_ABC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02141">
        <property type="entry name" value="modB_ABC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 8" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="17"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="95"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="202"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="15"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57808.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="25019" checksum="ABAC9DC3B76D8F75" modified="2015-05-27" version="2">MSMQAIDWNEYWPPIRLSLQVALLSSVLVILLGLFAAWSMSRLGLFKGKTLVETVLMLPLVLPPTVVGFLLLILLGRKSWFGRLVEQWFGEPIVFSWWAGVVAAVVVAFPLVYRTLRMGFASVDQDLENAGRSMGANEWQVFRYITFPLIFPSFKAAFILGFARGLGEFGATLMIAGNIPGKTQTIPTAIYIAVDSGHLPMAWVWTCSIILISFMMLLLTGQKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E923</accession>
    <name>E3E923_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373763.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5293"/>
    <dbReference type="EnsemblBacteria" id="ADO59230">
        <property type="protein sequence ID" value="ADO59230"/>
        <property type="gene ID" value="PPSC2_24780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5252"/>
    <dbReference type="eggNOG" id="ENOG502ZE6M">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2918251_0_0_9"/>
    <dbReference type="OMA" id="NKCDINH"/>
    <dbReference type="OrthoDB" id="2037026at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="6761" checksum="824CF7583C66F87E" modified="2011-01-11" version="1">MIDNLESNYDCAHAGEDLHQLKQELATLQAQGANDQASKEAIHRLENQISFILNKCDINH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9C9</accession>
    <name>E3E9C9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidase c14 caspase catalytic subunit p20</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371988.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3445"/>
    <dbReference type="EnsemblBacteria" id="ADO57402">
        <property type="protein sequence ID" value="ADO57402"/>
        <property type="gene ID" value="PPSC2_16125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3444"/>
    <dbReference type="eggNOG" id="COG4249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029389_5_0_9"/>
    <dbReference type="OrthoDB" id="1840421at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029030">
        <property type="entry name" value="Caspase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52129">
        <property type="entry name" value="SSF52129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="405" mass="45860" checksum="02493C174EBF07EC" modified="2011-01-11" version="1">MAKGYSLHIGLNFIDPQHYAGWDGRLIACEADAKDMELISRSLNYNNTSTLLTANATINNVATEIKKAATDLENGDIFFLTFSGHGGTSTDLNHDELDTHDETWCLYDGQVLDDELFELWSLFKEGVRIIILSDSCYSGTVSRARHYGLDTDTNIDTVNNIRYKFMPLEIAKRTYKNNINFYTNKVKHVIKNKNSIELKCSVKLISGCQDNQTSADGDINGYFTAKLLEVWNEGKFRGNYKDFYEKLKSIMPPTQTPNYYNIGITNTEFDNQKPFTIQDIIIPVRTLYVEDPIFPSSRSNVTDVIIEQIKREIEKTLEPLAQGNEGYVRCENLELNGTNLKARVLIRHKHKSNGITIYAAKTWVDIDTDVMNPDPEDLKVCINSPIGNICITLADLIKLIATLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9P6</accession>
    <name>E3E9P6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372415.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05480"/>
    <dbReference type="EnsemblBacteria" id="ADO57836">
        <property type="protein sequence ID" value="ADO57836"/>
        <property type="gene ID" value="PPSC2_18155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3878"/>
    <dbReference type="eggNOG" id="COG4221">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_2_10_9"/>
    <dbReference type="OMA" id="ANAIMYA"/>
    <dbReference type="OrthoDB" id="1261526at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="26618" checksum="23517EDCEC05524D" modified="2011-01-11" version="1">MLNIKGKVAAITGASSGIGEATARLLAQHGAHVVLGARRTERLEVLTSEIRSKGGYADYLQLDVTQREQMEAFIKYTEKRFGRVDVIVNNAGVMPLSKLEALKVEEWDRMIDVNIRGVLHGIAAGLPIMKKQGFGQFINIASIGAYSVTPTAAVYCATKYAVRAISEGLRMEVGGNIRVTLVSPGVTESELADSISDEEARQGMKEYRRIPISPDAIARSIVYAMEQPTDVDVNEIIVRPTASPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Q4</accession>
    <name>E3E9Q4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">GABA permease (4-amino butyrate transport carrier)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yvbW</name>
        <name evidence="8" type="ORF">PPSC2_18185</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372423.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05510"/>
    <dbReference type="EnsemblBacteria" id="ADO57844">
        <property type="protein sequence ID" value="ADO57844"/>
        <property type="gene ID" value="PPSC2_18185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3885"/>
    <dbReference type="eggNOG" id="COG1113">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007946_9_3_9"/>
    <dbReference type="OMA" id="SFTVQYW"/>
    <dbReference type="OrthoDB" id="430372at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004841">
        <property type="entry name" value="AA-permease/SLC12A_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004840">
        <property type="entry name" value="Amoino_acid_permease_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00324">
        <property type="entry name" value="AA_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00218">
        <property type="entry name" value="AMINO_ACID_PERMEASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="91"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="196"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="284"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="333"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="358"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="393"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="422"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="domain" description="AA_permease" evidence="7">
        <location>
            <begin position="16"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="447" mass="48721" checksum="9F12A337FF4CCC6D" modified="2011-01-11" version="1">MKSNEATLHKKLRPRHITFMAMGGVIGTGIFKGSTETISLAGPGVILSYVFAGLLLLVVMGAIAEMATVYPNMNMKDFIRKAFGERLSFIIGWLYCFMWLAVCVIEVIAAGSFLQYWLPDVPLWLLSLASAAFIIVVNMLSVGGLGELEFWLAGIKIAMIIIFIALGGCILFGIIPTETPPYLSNYAQHGGFLPNGWLAIFSALLVVTFSYGGSELIGLTLTETENPEKVLPKVVKSFILRVVLFYTLPILIICGLIPWNQLDASTSPFVQVLSSVGLQGSAHVMNFILITAVLSAANSGIYGATRMLHSLAINGEGPKSLARLSSNGVPVNSLKLCAVILIVGSMVAYVAQDGLFRILMAVPGFVVLLVWSCICLSQLKLRKSYPVEPTFKIWGYPYITAVTVGCLWVIAFLFLIDPQNRISISVCVAFMAFLIIWSLVKFRRKQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Q7</accession>
    <name>E3E9Q7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rmaC</name>
        <name evidence="2" type="ORF">PPSC2_18200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372426.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3895"/>
    <dbReference type="EnsemblBacteria" id="ADO57847">
        <property type="protein sequence ID" value="ADO57847"/>
        <property type="gene ID" value="PPSC2_18200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3888"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_18_0_9"/>
    <dbReference type="OMA" id="VKFEACT"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="14885" checksum="E06795781A7319B9" modified="2011-01-11" version="1">MLLLLNKQISSKFERCAGISASRLQLLCKLYQVEEISQTLLQKEVGIDGAAVTRHLKQLEATEMVTRRTKPEDNRVTLVSLTDYGRARIVIFKQERSQFVAQLLQSFDETQRNQLADMLQVMNSHISSMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9S4</accession>
    <name>E3E9S4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372443.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3912"/>
    <dbReference type="EnsemblBacteria" id="ADO57864">
        <property type="protein sequence ID" value="ADO57864"/>
        <property type="gene ID" value="PPSC2_18275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3908"/>
    <dbReference type="eggNOG" id="ENOG50337JV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1561407_0_0_9"/>
    <dbReference type="OrthoDB" id="1970267at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="20742" checksum="A5D7390F29A261F3" modified="2011-01-11" version="1">MDFRLSIGSDLSREALGKLLYNMICEVLVMEINFYEVEVKDWSDARQVSISCTYFSISINLDDEDDYLERFREMNLEDHGVDTNVLISIQFVSRTFDIGWLKLLEVIGKLLRLNDQDLVVEDDSSYPLLKRIKGRLFINTNLDEYQTRYITKENLKLLNYPYLEEDFFKDSGYKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA00</accession>
    <name>E3EA00_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome C biogenesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cebF</name>
        <name evidence="7" type="ORF">PPSC2_19575</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372705.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06795"/>
    <dbReference type="EnsemblBacteria" id="ADO58133">
        <property type="protein sequence ID" value="ADO58133"/>
        <property type="gene ID" value="PPSC2_19575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4173"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_2_9"/>
    <dbReference type="OMA" id="YAIAPPV"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="106"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="212"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="261"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="68"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="32786" checksum="9768FA92E2C2120F" modified="2011-01-11" version="1">MLREIWKHRAVYAAISPFYLLFAIFGLFPIGFSLYLAFHKWDGIGDMTYNGWGNFRYLVTDTEFWQAVGNTFVIWVYATIPMLLLALIVAFLLYAPFVKLRTLWRVGFFLPNVTSIVAVAIIFGALFANNFGFLNYLLQLLGLPMIQWLNVPWGIQIAISSMVVWRWMGYNAIIYLAGLQSIPHVLYEAAKIDGATGAQAFFRITIPMLRPVILFTVITSTIGGMQLFTEPQVLVGNDGGSGASGMTIVLYLYRESFINNYFGYGAAVGWGMFLIIAVFSIINWKLVQGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA17</accession>
    <name>E3EA17_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mannose-1-phosphate guanylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">manC5</name>
        <name evidence="3" type="ORF">PPSC2_19645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372722.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06865"/>
    <dbReference type="EnsemblBacteria" id="ADO58150">
        <property type="protein sequence ID" value="ADO58150"/>
        <property type="gene ID" value="PPSC2_19645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4189"/>
    <dbReference type="eggNOG" id="COG0662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0836">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035527_1_0_9"/>
    <dbReference type="OMA" id="LIVCNEK"/>
    <dbReference type="OrthoDB" id="224217at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005976">
        <property type="term" value="P:polysaccharide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001538">
        <property type="entry name" value="Man6P_isomerase-2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01050">
        <property type="entry name" value="MannoseP_isomer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="MannoseP_isomer" evidence="2">
        <location>
            <begin position="297"/>
            <end position="441"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="451" mass="50159" checksum="A0381CA11A948424" modified="2011-01-11" version="1">MILLSGGSGKRLWPLSNVNRPKQFLSILRHDERPESMLQRIWRQLDEADLADQAYFSTSGTQIELIQGQIGGDAVVIEEPTQRDTFPAISLATAYLHDVAGASRDEIVGVMPVDGYAGDEFFEHLRRLPSILEQSGSHIALMGAVPTEPSDKYGYIVPSSPLSDQEYYRVSSFVEKPDLIRSEVLIREGALWNCGVFAFRIGFLLDVLTQMGLPADYETLSTNYADLPKTSFDIAVVEHTRKLSVLPYHGEWRDLGTWDSLVREVSSKLSGPGYISEASHDSHIINELEIPVSIWNVPDIIVVAGPDGVLVTDRQSSTGIKDMVAEIEIGPRFEERFWGKQTVLSHQQAASGLQTVTKRVVISKGRFISYHEHQFRKEVWTIVSGTGSVCINGMTQTVSPGMVIVVEPGTKHFIGAVEGDLEFIESQIGHIVSETDIIRYEFPDWIDARTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA21</accession>
    <name>E3EA21_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372726.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4204"/>
    <dbReference type="EnsemblBacteria" id="ADO58154">
        <property type="protein sequence ID" value="ADO58154"/>
        <property type="gene ID" value="PPSC2_19665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4193"/>
    <dbReference type="eggNOG" id="ENOG50305KA">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1747824_0_0_9"/>
    <dbReference type="OMA" id="CERFDSA"/>
    <dbReference type="OrthoDB" id="1450628at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="16940" checksum="B5F8DDD4781F620A" modified="2011-01-11" version="1">MYNISVLAFLKDVSTERALRLFCERFDSAEHALWEKGMRLLHEYHAARHTGVTLAVSSALQHMDDRHDIYVVDLRAYSEEDLDRLYIAKTCELILLTDGATETAARFAALQRRTPRLLCARLPLVSYELECLMQAILSRLEQNGGDRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA44</accession>
    <name>E3EA44_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Aminodeoxyfutalosine synthase</fullName>
            <shortName evidence="6">AFL synthase</shortName>
            <shortName evidence="6">Aminofutalosine synthase</shortName>
            <ecNumber evidence="6">2.5.1.120</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Menaquinone biosynthetic enzyme MqnE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mqnE</name>
        <name evidence="8" type="ORF">PPSC2_20480</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>3-[(1-carboxyvinyl)-oxy]benzoate + H2O + S-adenosyl-L-methionine = 6-amino-6-deoxyfutalosine + H(+) + hydrogencarbonate + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:33075"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64286"/>
            <dbReference type="ChEBI" id="CHEBI:76981"/>
            <dbReference type="EC" id="2.5.1.120"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Quinol/quinone metabolism; menaquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the radical SAM superfamily. MqnE family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.120" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372907.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07735"/>
    <dbReference type="EnsemblBacteria" id="ADO58336">
        <property type="protein sequence ID" value="ADO58336"/>
        <property type="gene ID" value="PPSC2_20480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4368"/>
    <dbReference type="eggNOG" id="COG1060">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040406_1_0_9"/>
    <dbReference type="OMA" id="HIKAYWA"/>
    <dbReference type="OrthoDB" id="940969at2"/>
    <dbReference type="UniPathway" id="UPA00079"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102573">
        <property type="term" value="F:aminodeoxyfutalosine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009234">
        <property type="term" value="P:menaquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00993">
        <property type="entry name" value="MqnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045567">
        <property type="entry name" value="CofH/MnqC-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034405">
        <property type="entry name" value="F420"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020050">
        <property type="entry name" value="FO_synthase_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022432">
        <property type="entry name" value="MqnE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43076">
        <property type="entry name" value="PTHR43076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19288">
        <property type="entry name" value="CofH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00343">
        <property type="entry name" value="aminofutalosine_synthase_(mqnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03700">
        <property type="entry name" value="mena_SCO4494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00423">
        <property type="entry name" value="TIGR00423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0474">Menaquinone biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="59"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="41947" checksum="01CCE4CB99A594CA" modified="2011-01-11" version="1">MSTLVTPFTDRRMAEIVEKVQNGIRLNLEDGIYLYETDDILTLGQLANEANLRKNGKKVYFIENMSLYFTNVCEARCAFCNFRKDQGEEGSYTLSGQEMIDYVEQHIHPGVREFHIVGGHNNHVPFQYYVDSLKALNEKYPNVTLKAYTAAEIDFFTRISGLSIKEVLQELQKAGLQSLTGGGAEILSDEYRKKMRVTKANVDRYLEVHRTAHNLGMKTHTTMLYGSVETYQDRIEHMLQIRELQDETNGFMVFIPLSMQPKSKNANIMRRNSAYEDLKTIAISRLMLDNIDHVKAYFINIGPQLTQVALTFGASDVHGTIVREQISHAAGALTPSGLTRKELIWLVKGAGRIPVERDTFYNEIEVFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAJ5</accession>
    <name>E3EAJ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Clp protease ClpX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">clpC</name>
        <name evidence="10" type="ORF">PPSC2_22580</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the ClpA/ClpB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373292.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10045"/>
    <dbReference type="EnsemblBacteria" id="ADO58753">
        <property type="protein sequence ID" value="ADO58753"/>
        <property type="gene ID" value="PPSC2_22580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4787"/>
    <dbReference type="eggNOG" id="COG0542">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005070_4_1_9"/>
    <dbReference type="OMA" id="SKMMQGE"/>
    <dbReference type="OrthoDB" id="44062at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036628">
        <property type="entry name" value="Clp_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004176">
        <property type="entry name" value="Clp_R_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018368">
        <property type="entry name" value="ClpA/B_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028299">
        <property type="entry name" value="ClpA/B_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041546">
        <property type="entry name" value="ClpA/ClpB_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001943">
        <property type="entry name" value="UVR_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17871">
        <property type="entry name" value="AAA_lid_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02861">
        <property type="entry name" value="Clp_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81923">
        <property type="entry name" value="SSF81923"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51903">
        <property type="entry name" value="CLP_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00870">
        <property type="entry name" value="CLPAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00871">
        <property type="entry name" value="CLPAB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0143">Chaperone</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Clp R" evidence="9">
        <location>
            <begin position="3"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="UVR" evidence="8">
        <location>
            <begin position="417"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="413"/>
            <end position="459"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="814" mass="90558" checksum="35E637AAE357499E" modified="2011-01-11" version="1">MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVETLIGRGQEQPTNIAYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLGSSEAVSSHHGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVRLSDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFEKAAALRDTEQKIREELDVTKNQWKEQQGRTDSEVTPEDIAQVVAIWTGVPVSKLKEEETHRLLNMEQLLHERVIGQEEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNSTLGFTAVVDAGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSEELRKRLNEYEVDFELTDKAKNFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNISKGDSLYIDEENGALTVTKKDNVSAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT0</accession>
    <name>E3EAT0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373530.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5055"/>
    <dbReference type="EnsemblBacteria" id="ADO58994">
        <property type="protein sequence ID" value="ADO58994"/>
        <property type="gene ID" value="PPSC2_23720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5020"/>
    <dbReference type="eggNOG" id="ENOG50318MH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_200492_0_0_9"/>
    <dbReference type="OMA" id="VISIGIW"/>
    <dbReference type="OrthoDB" id="2019827at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8653" checksum="8182D1075D263011" modified="2011-01-11" version="1">MNKVFLLPLLLAMLFMYLIDRKRISNAPAVNRWVSRVLYVISIGIWIYGTSTKSTVYVATWLTRFIDMWLPTAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAV8</accession>
    <name>E3EAV8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein liaG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">liaG3</name>
        <name evidence="2" type="ORF">PPSC2_23855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373558.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5084"/>
    <dbReference type="EnsemblBacteria" id="ADO59022">
        <property type="protein sequence ID" value="ADO59022"/>
        <property type="gene ID" value="PPSC2_23855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5047"/>
    <dbReference type="eggNOG" id="COG3595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075788_0_0_9"/>
    <dbReference type="OMA" id="HNARIEN"/>
    <dbReference type="OrthoDB" id="1314720at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025164">
        <property type="entry name" value="DUF4097"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13349">
        <property type="entry name" value="DUF4097"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4097" evidence="1">
        <location>
            <begin position="50"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="29994" checksum="4C60EE6A12881BE2" modified="2011-01-11" version="1">MNKKWFIAAGLCIVIGAAGMVAYGAPWNQQVMKETTAINKKWTFTRGQLQNLKVDSSDDVSILFTPGSGDQGTIRISGEVQTKVADQIHNARIENGKLTIQSEPAPSLSFFSITPDLDQTITVEMPSGETLTDLQVDAHSGNVKLQDASVKNTSITATSGTAEITNLQSTHLIANLTSGNFTASQLAADMELKLTSGDVTIRDYSGNGLLSLTSGETNITQRAVANLEVNADSGDVKIKQAPDFKGVYNVRSDSGSVNTPESVPGSVNVIKVETTSGDIDISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBA2</accession>
    <name>E3EBA2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvaF</name>
        <name evidence="3" type="ORF">PPSC2_20950</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373003.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08180"/>
    <dbReference type="EnsemblBacteria" id="ADO58434">
        <property type="protein sequence ID" value="ADO58434"/>
        <property type="gene ID" value="PPSC2_20950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4468"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_30_3_9"/>
    <dbReference type="OMA" id="ERTNDDM"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="21948" checksum="A65D342EA5E1E64C" modified="2011-01-11" version="1">MQERILEAFVEEVHENGLKFTMDDLAKRLAISKRTLYENFSSKTLILETLIERTNDDMIQKTEEIIQNNELTLLEKIKQSIRVMPLYYKFYDLRILDQMKKYYPEQWKRVHADLNDWSPIRTLIQEGIREGVIVNKNEALIMKLIIDSVNLTLDQRFFLDNSVTVEEATYSIVDILLFGLVEKQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBE3</accession>
    <name>E3EBE3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Riboflavin biosynthesis protein RibD</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="10">Diaminohydroxyphosphoribosylaminopyrimidine deaminase</fullName>
                <shortName evidence="10">DRAP deaminase</shortName>
                <ecNumber evidence="10">3.5.4.26</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="10">Riboflavin-specific deaminase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="10">5-amino-6-(5-phosphoribosylamino)uracil reductase</fullName>
                <ecNumber evidence="10">1.1.1.193</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="10">HTP reductase</fullName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="15" type="primary">ribD</name>
        <name evidence="15" type="ORF">PPSC2_21895</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + H(+) + H2O = 5-amino-6-(5-phospho-D-ribosylamino)uracil + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:21868"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:58453"/>
            <dbReference type="ChEBI" id="CHEBI:58614"/>
            <dbReference type="EC" id="3.5.4.26"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>5-amino-6-(5-phospho-D-ribitylamino)uracil + NADP(+) = 5-amino-6-(5-phospho-D-ribosylamino)uracil + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:17845"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58421"/>
            <dbReference type="ChEBI" id="CHEBI:58453"/>
            <dbReference type="EC" id="1.1.1.193"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10 13">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10 13">Binds 1 zinc ion.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Cofactor biosynthesis; riboflavin biosynthesis; 5-amino-6-(D-ribitylamino)uracil from GTP: step 2/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Cofactor biosynthesis; riboflavin biosynthesis; 5-amino-6-(D-ribitylamino)uracil from GTP: step 3/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 10">In the C-terminal section; belongs to the HTP reductase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">In the N-terminal section; belongs to the cytidine and deoxycytidylate deaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.26" evidence="10"/>
    <dbReference type="EC" id="1.1.1.193" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373184.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09040"/>
    <dbReference type="EnsemblBacteria" id="ADO58617">
        <property type="protein sequence ID" value="ADO58617"/>
        <property type="gene ID" value="PPSC2_21895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4658"/>
    <dbReference type="eggNOG" id="COG0117">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1985">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036590_1_2_9"/>
    <dbReference type="OMA" id="PYIILKW"/>
    <dbReference type="OrthoDB" id="1775351at2"/>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00401"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008703">
        <property type="term" value="F:5-amino-6-(5-phosphoribosylamino)uracil reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008835">
        <property type="term" value="F:diaminohydroxyphosphoribosylaminopyrimidine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016192">
        <property type="entry name" value="APOBEC/CMP_deaminase_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024072">
        <property type="entry name" value="DHFR-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004794">
        <property type="entry name" value="Eubact_RibD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011549">
        <property type="entry name" value="RibD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002734">
        <property type="entry name" value="RibDG_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00383">
        <property type="entry name" value="dCMP_cyt_deam_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01872">
        <property type="entry name" value="RibD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006769">
        <property type="entry name" value="RibD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53597">
        <property type="entry name" value="SSF53597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00326">
        <property type="entry name" value="eubact_ribD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00227">
        <property type="entry name" value="ribD_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00903">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 10 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="10 12" id="KW-0521">NADP</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0686">Riboflavin biosynthesis</keyword>
    <keyword evidence="8 10 13" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="14">
        <location>
            <begin position="2"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="11">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="171"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="197"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="296"/>
            <end position="302"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR006769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR006769-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR006769-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR006769-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO58617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="366" mass="39762" checksum="E1A9DEED0FFEC86C" modified="2011-01-11" version="1">MNTHEKYMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMAGEHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQILKDAGIEVIVGVCEQESIRMNEVFNQYIVNKRPFITIKSAVTLDGKIATRTSESKWITSEAAREDVHRLRHEHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSKLRIPLDARVITDGEAPTWIFTGRTYDKGKRSQLEQLGVKVYPTQDEYSERVNLPQMLDILGAAEVSSVFVEGGAEVNASFVQQGLADKLVLYIAPKLVGGRSAPGFLGGEGVSAMSDAVALQDLSVTQVGVDWKIEGYFERGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECB2</accession>
    <name>E3ECB2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">YdjH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydjH</name>
        <name evidence="7" type="ORF">PPSC2_01340</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368897.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14060"/>
    <dbReference type="EnsemblBacteria" id="ADO54255">
        <property type="protein sequence ID" value="ADO54255"/>
        <property type="gene ID" value="PPSC2_01340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.265"/>
    <dbReference type="eggNOG" id="COG1512">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072017_0_0_9"/>
    <dbReference type="OMA" id="SKYQLKF"/>
    <dbReference type="OrthoDB" id="1738788at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007621">
        <property type="entry name" value="TPM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04536">
        <property type="entry name" value="TPM_phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168770" evidence="5">
        <location>
            <begin position="30"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="TPM_phosphatase" evidence="6">
        <location>
            <begin position="37"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="228"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="235"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="29110" checksum="F0F1C505DC2011EE" modified="2011-01-11" version="1">MKKYRAIVAVLLFFAAFLAVPMEMKGEAATTEMKPLIFDEAGLLNQEEYDVLNTMANQYGAERETDIIVYTTNNPDNMDVMKMTQDFYDDHGPGYDRSHGNAVILTMDMRNREVYLAGFYKAERYLDDDRLTKIRHEITPDLTNGNYGLAFQKYILGARKYLAIRPGVNPDSIFFKGWLHLAVALGLASIIVGKMVSSSGGRVTVNRQTYEDASTSGVLAHQDLYTHTTTTKRKIEKSSSSSSSGGGGGTTSGGHSHSGSRGSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECL5</accession>
    <name>E3ECL5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yxkD</name>
        <name evidence="9" type="ORF">PPSC2_03985</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369422.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16790"/>
    <dbReference type="EnsemblBacteria" id="ADO54787">
        <property type="protein sequence ID" value="ADO54787"/>
        <property type="gene ID" value="PPSC2_03985"/>
    </dbReference>
    <dbReference type="GeneID" id="66574180"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.793"/>
    <dbReference type="eggNOG" id="COG1284">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063199_1_1_9"/>
    <dbReference type="OMA" id="FITIHDV"/>
    <dbReference type="OrthoDB" id="1747063at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019264">
        <property type="entry name" value="DUF2179"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003740">
        <property type="entry name" value="YitT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10035">
        <property type="entry name" value="DUF2179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02588">
        <property type="entry name" value="YitT_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006483">
        <property type="entry name" value="Membrane_protein_YitT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="107"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2179" evidence="8">
        <location>
            <begin position="216"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF10035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="30812" checksum="E6B85DF9D65DF2B9" modified="2011-01-11" version="1">MKKSIADIVFIILGAFFFALAVNLYVIPNEFGEGGVTGVTIILYYLFQWSPSIVNLVINGLLLIVGYKFLDKRTTLYTIIAVAFNSLFLHLTVNWRIDSHEPTINAVFAGVLVGVGIGLIVRVGGTTAGTVILARIANKYLDWNISYALLFFDLIVAFSSYFIIGPEKLMLTIVILYVGTKVMDFMIEGLNPKKAVMIISEHQDKIAEMVITQMDRGVTVLSGHGYYTKNPKEVLYIVISKQEVSALKKIVKAIDTAAFITIHDVRDVFGEGFLDISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED43</accession>
    <name>E3ED43_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">L-serine deaminase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">sdhB1</name>
        <name evidence="11" type="ORF">PPSC2_02165</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-serine = NH4(+) + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:19169"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="EC" id="4.3.1.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="8">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8 9">Belongs to the iron-sulfur dependent L-serine dehydratase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369040.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14930"/>
    <dbReference type="EnsemblBacteria" id="ADO54400">
        <property type="protein sequence ID" value="ADO54400"/>
        <property type="gene ID" value="PPSC2_02165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.409"/>
    <dbReference type="eggNOG" id="COG1760">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086592_0_0_9"/>
    <dbReference type="OMA" id="HTAGACR"/>
    <dbReference type="OrthoDB" id="1720141at2"/>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003941">
        <property type="term" value="F:L-serine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029009">
        <property type="entry name" value="ASB_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004643">
        <property type="entry name" value="Fe-S_L-Ser_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005131">
        <property type="entry name" value="Ser_deHydtase_bsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03315">
        <property type="entry name" value="SDH_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036692">
        <property type="entry name" value="SDH_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143548">
        <property type="entry name" value="SSF143548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00719">
        <property type="entry name" value="sda_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="8 9" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="5 8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="6 8 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7 8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT" evidence="10">
        <location>
            <begin position="148"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR036692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="24702" checksum="A4F8672E70B59240" modified="2011-01-11" version="1">MRFKDVFSIIGPAMTGPSSSHTAGAVRLARVARHWLGTQPDRARMTLYGSFADTYKGHGTDLALIAGLLNYDTDDHRIPDAEQWAEQAGMAVEFAVSGLPAPHPNTVRFELWKGEDQRTLLGSSIGGGSIHVQQLNEFRVNLTGELSTLVLLHSDKPGTLGAVTSALGAADINIAYMHVDRKGRDGEALTAIETDSLPTAELIAKLQSLPHMYEIKMINLKKGAESDAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED58</accession>
    <name>E3ED58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-566</name>
        <name evidence="3" type="ORF">PPSC2_02230</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54415.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599412.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0431"/>
    <dbReference type="EnsemblBacteria" id="ADO54415">
        <property type="protein sequence ID" value="ADO54415"/>
        <property type="gene ID" value="PPSC2_02230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.423"/>
    <dbReference type="eggNOG" id="COG5001">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_11_16_9"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="64"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54415.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26473" checksum="A6AF13034D7E5624" modified="2015-05-27" version="2">MSISLTALLLIGLTLALWIYTLIFLHSVMMERNLLRKLAYQDPVTGLFNRNALELFWKRSNGKEGFAIMYLDLDGFKAINDTYGHQIGDKLLRRVSDHLLQVTNSHQKAFRIGGDEFLLIMKDYDADQVTVLAELLLQKISVPYNIQGINLQVTGSIGITMHPSPKKPLPSLLKEADIAMYQAKGMGRNRYAVYQRIRQRPNVRSYGTARVIKFAAGFRKKTKIQGIQQMATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED61</accession>
    <name>E3ED61_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yebA1</name>
        <name evidence="3" type="ORF">PPSC2_02245</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0434"/>
    <dbReference type="EnsemblBacteria" id="ADO54418">
        <property type="protein sequence ID" value="ADO54418"/>
        <property type="gene ID" value="PPSC2_02245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.426"/>
    <dbReference type="eggNOG" id="COG1305">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054517_0_0_9"/>
    <dbReference type="OMA" id="HAWNEVF"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="TGc" evidence="2">
        <location>
            <begin position="237"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="321" mass="36495" checksum="F2CF7A8D1FA0B3F9" modified="2011-01-11" version="1">MMAASYRLKWLFVVLIFPENFIRNGKPVERQGRKAIGPSIDDGSLATERKFFMGKMILSTLLLFFMLSAILLNSTIYAADSVAWLDQNNVNHGTVSVRYPVKPNVKTKILVTKDAQKYSYNLTPGKSEEVFPLQMGNGNYNISILEQLSGNQYKVIGQDTIELKLNDSKAVYLNSVQNINWSSTNQAIQKARELTQGATTDREKLQKIYDYVISHIKYDSNQAFALTTDYLPQIDHTLSSQKDICYGYASLMAAMLRSVDVPTKLVMGKSSYVDTYHAWNEVYIDNQWVVVDTTVDAALYMGKQKFQMVKDPSKYIKTKQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDC3</accession>
    <name>E3EDC3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yobV1</name>
        <name evidence="4" type="ORF">PPSC2_04515</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17415"/>
    <dbReference type="EnsemblBacteria" id="ADO54902">
        <property type="protein sequence ID" value="ADO54902"/>
        <property type="gene ID" value="PPSC2_04515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.906"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041141_5_2_9"/>
    <dbReference type="OMA" id="TERINDM"/>
    <dbReference type="OrthoDB" id="1654295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00420">
        <property type="entry name" value="HTH_DEOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="3">
        <location>
            <begin position="3"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="37394" checksum="06CB9FD6C3D22299" modified="2011-01-11" version="1">MKKSERLNDMIRYLNSREYFNLNDLMDKYHISKSTALRDISSLEQLGMPIYSEHGRHGRYGILKNRLLSPIIFTMDEVYALYFAMLTLEAYQSTPFHLSVNKLNEKFEHCLSKIQINQIHKMKKVLQFEIYQHNHVSLYLDKILTSILNETYCKVQYSKNNQNKSYHVQFFKISAKFGQWYATGIELNTNKYRVFRCDRITLVEEEEINSHFSIDELLSRSLEMYQTEKSIDFEVEIVEQAKDIFYKEHYPSMKIQQGHKTVIKGFYNPGEEEFIAHYFMRYGHYVQSVKPESLKQIIKERVEHLLNHYQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE84</accession>
    <name>E3EE84_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yxxF</name>
        <name evidence="4" type="ORF">PPSC2_05015</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55007.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599513.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1025"/>
    <dbReference type="EnsemblBacteria" id="ADO55007">
        <property type="protein sequence ID" value="ADO55007"/>
        <property type="gene ID" value="PPSC2_05015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1012"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033863_0_2_9"/>
    <dbReference type="OrthoDB" id="1515911at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="42"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="101"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="126"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="218"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="245"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="271"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="12"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="154"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55007.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33496" checksum="F8B03BECF8321AF2" modified="2015-05-27" version="2">MKINKTSLPLHPYFLLFISILSVSISSIMIKSSDTPTSVAGMYRLYMSVILMLPFVPWKMLRSIKMTKKDWGTVFMAGLFLGLHFLFWMESLVYTSVASSMVILSLQPLFVMIGSYFMFRERVSLFTIFCLIAALIGSIIIAWGDIGTSKEALIGDGLSLLGTILISAYMLAGQKVSHKINANFYSVIVFFLGGSVLLVYNLVNHYSLTEYDSSDWTYFLLLAVIPTIFGQYIFNLLLKSMGATTVSVGIIGEPVLAILLAYLFLGEIMSAFQFIGGIMTLFGMGMYFWAKSLKYTVAKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN8</accession>
    <name>E3EEN8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pectate lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pelE</name>
        <name evidence="2" type="ORF">PPSC2_08280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370345.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EEN8"/>
    <dbReference type="STRING" id="1406.LK13_20885"/>
    <dbReference type="CAZy" id="PL10">
        <property type="family name" value="Polysaccharide Lyase Family 10"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55725">
        <property type="protein sequence ID" value="ADO55725"/>
        <property type="gene ID" value="PPSC2_08280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1740"/>
    <dbReference type="eggNOG" id="COG1657">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_684833_0_0_9"/>
    <dbReference type="OMA" id="HITFNDG"/>
    <dbReference type="OrthoDB" id="227712at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012669">
        <property type="entry name" value="Pectate_lyase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09492">
        <property type="entry name" value="Pec_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02474">
        <property type="entry name" value="pec_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168842" evidence="1">
        <location>
            <begin position="34"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="402" mass="45240" checksum="83ED5BF2B26931A4" modified="2011-01-11" version="1">MRFNVKKSVKWIAFSGMAITLTTGLVSPSWAAAEQNLTDAGTSVTQAVYNDANVYKNAVVPLASVNVSSLLDKYRDFSKFSTGNTSKDTTLALNIVSWQLPHGGFFKAMEKNYKSKWDGKAARSTWKSKDGVELGTFDNEATTTEIRFLADVYKKTKNKDIKTSVQKAIDFVLTSQYSSGAWPQVYPKRGNYSDAATYNDDAMVRVMVLADDIVNKRQPFDSDILDNTYRSRLQQALNKGVQYTIKAQIVNNGTPTIWGAQHDPVTYESVPARAFELASKTTTESVGITAFLMSQPQTAEVKKAAQSALKWFDMNRIDGMKYNRQGPEFFQKDASSVMWYRFYNVEDNKYFFSDRDGKKYTDIMKISEERRLGYAWAGSQAKSLLKLASESGYYKLSKPLPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF06</accession>
    <name>E3EF06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sporulation initiation phosphotransferase F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spo0F</name>
        <name evidence="3" type="ORF">PPSC2_00690</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54129.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599366.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13680"/>
    <dbReference type="EnsemblBacteria" id="ADO54129">
        <property type="protein sequence ID" value="ADO54129"/>
        <property type="gene ID" value="PPSC2_00690"/>
    </dbReference>
    <dbReference type="GeneID" id="66574827"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.138"/>
    <dbReference type="eggNOG" id="COG2204">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_69_8_9"/>
    <dbReference type="OrthoDB" id="1630092at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="5"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54129.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="13778" checksum="5DD7FF8F91B1655C" modified="2015-05-27" version="2">MEKKKVLIVDDQNGIRILLMEVFGSEGYETFQAANGKIALEIVEKEPPDLVLLDMKIPGMDGLEILKHLKSMNPDIKVIMMTAYGELDMIKEATELGALMHFTKPFDIDEMRIAVNKQLRGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF65</accession>
    <name>E3EF65_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytochrome C553</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dltE1</name>
        <name evidence="2" type="ORF">PPSC2_03095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369224.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15905"/>
    <dbReference type="EnsemblBacteria" id="ADO54585">
        <property type="protein sequence ID" value="ADO54585"/>
        <property type="gene ID" value="PPSC2_03095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.592"/>
    <dbReference type="eggNOG" id="COG3967">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_2_6_9"/>
    <dbReference type="OMA" id="WSMNLRT"/>
    <dbReference type="OrthoDB" id="1261526at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="27734" checksum="54D06E9F8901006D" modified="2011-01-11" version="1">MKLSGNTILITGGSTGIGLAFAERFLKAGNKVIVTGRREHVLQKAKEKLPSLITHVSDLNIESERIAVSDWVTTNYPEVNVLVNNAGIQQRFNVLKTDAKNNWDYFSKEITTNIEAPFHLSMLLAPYFATKEEATIINVTSGLAFTPFVIAPIYSATKAALHSFTISLRHQLSDTSVEVIEVVPPAVNTDLGGAGLHTQGEPLDDFADGIFKGLEEGKIEIGYGTSVARLRMSRNEVDEHVENMYKATKNSIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN4</accession>
    <name>E3EFN4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ykoH1</name>
        <name evidence="12" type="ORF">PPSC2_07405</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370152.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20385"/>
    <dbReference type="EnsemblBacteria" id="ADO55525">
        <property type="protein sequence ID" value="ADO55525"/>
        <property type="gene ID" value="PPSC2_07405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1531"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_6_9"/>
    <dbReference type="OMA" id="VKAQMTE"/>
    <dbReference type="OrthoDB" id="692375at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="152"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="177"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="239"/>
            <end position="452"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="453" mass="50608" checksum="D6B50A4BE910287E" modified="2011-01-11" version="1">MKLQNKIHTYTSLLFGILLVAINFSVYFLFSQLSIDSRKNQVEAAAENMIHGIQRAPVSIAAEDLLRAYVPLDGMLRLMRPEGDFLAPITSSSEQSLSLMKGVFNETRQVRIITHESNRYILVSVPMIWSNGEVVNLQVTESLQPTMQTLQVLKIVLIAVTGIALIPVVISGRLLGRLITHPITSMISTMKEIQRSGKFKRLPLNSSSRDELVEMGETFNDMIELLERNFVRQEQFVSNASHELKTPLTIIESYASLLKRRGLQNPNIFAESVEAIHSEAIRMKDMAEQLLLLARNEEQWNVVLEPVRLTKVGTELKATFENAFARQIQLDVQTDCTAFTDENKLKQLLFIFLDNARKYSDEPIHLMIDIVSGTAQPCIRITDQGIGIPEEKLSKVFDRFYRVDEARSREEGGAGLGLSLATGIAQAIQAQIGLESIEGSGTTATIILPAVPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFX7</accession>
    <name>E3EFX7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ylbH</name>
        <name evidence="4" type="ORF">PPSC2_09620</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56010.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599656.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22085"/>
    <dbReference type="EnsemblBacteria" id="ADO56010">
        <property type="protein sequence ID" value="ADO56010"/>
        <property type="gene ID" value="PPSC2_09620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2028"/>
    <dbReference type="eggNOG" id="COG0742">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075826_0_0_9"/>
    <dbReference type="OrthoDB" id="1827334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031167">
        <property type="term" value="P:rRNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004398">
        <property type="entry name" value="RNA_MeTrfase_RsmD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004553">
        <property type="entry name" value="CHP00095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00095">
        <property type="entry name" value="TIGR00095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="191"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56010.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="23109" checksum="22F1FAF9EB4E7EF4" modified="2015-05-27" version="2">MRVVSGSAKGRPLKAVPGTGTRPTTDKVKEALFSMIGPYFDGGVALDLFAGSGGLGIEALSRGMDKAVFIDMESKSIDVIKENLRKTGLEGKAEVFRNDAGRALKALAKRGALFDAVFLDPPYRLKHGDELMRRMAELDLLRSGAIIVLEYESGHEYPISFGPFEQVRKAVYGETALSIYHFADDALSDAEEHTEAEGGKFGITESDGEDHHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFY7</accession>
    <name>E3EFY7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Phosphate acyltransferase</fullName>
            <ecNumber evidence="3 4">2.3.1.274</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Acyl-ACP phosphotransacylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Acyl-[acyl-carrier-protein]--phosphate acyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Phosphate-acyl-ACP acyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">plsX</name>
        <name evidence="5" type="ORF">PPSC2_09660</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>a fatty acyl-[ACP] + phosphate = an acyl phosphate + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:42292"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:59918"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
            <dbReference type="EC" id="2.3.1.274"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Lipid metabolism; phospholipid metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Probably interacts with PlsY.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="4">Associated with the membrane possibly through PlsY.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the PlsX family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.274" evidence="3 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370637.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22125"/>
    <dbReference type="EnsemblBacteria" id="ADO56020">
        <property type="protein sequence ID" value="ADO56020"/>
        <property type="gene ID" value="PPSC2_09660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2036"/>
    <dbReference type="eggNOG" id="COG0416">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039379_1_1_9"/>
    <dbReference type="OMA" id="HGKSNAR"/>
    <dbReference type="OrthoDB" id="631784at2"/>
    <dbReference type="UniPathway" id="UPA00085"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043811">
        <property type="term" value="F:phosphate:acyl-[acyl carrier protein] acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00019">
        <property type="entry name" value="PlsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003664">
        <property type="entry name" value="FA_synthesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012281">
        <property type="entry name" value="Phospholipid_synth_PlsX-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30100">
        <property type="entry name" value="PTHR30100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02504">
        <property type="entry name" value="FA_synthesis"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002465">
        <property type="entry name" value="Phsphlp_syn_PlsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00182">
        <property type="entry name" value="plsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="4" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="34997" checksum="7AA50BA465DCB365" modified="2011-01-11" version="1">MRIAIDAMGGDNAPEATVEGALSAAAEWKDTDITLVGDRERIESVLNGRALPTNLTIRHASETIDAQDEPVKTVRRKKDASMVVAGRMVREGEADAMISAGNTGALMTTGLLVVGRMEGIERPALAPMIPTIDDQGILALDLGANMDAKPEHLAQYALMGSLYRQKVHGLASPRVGLLNVGTEAGKGNELTKLAFPLIEQLPVNFVGNVESRDVLTGNCDVLVCDGFAGNIMLKSLEGTAGAIFSLLKEQFTKSLKTKLAAALIMPELRGLKGKLDYKEHGGAPLLGLSGLVLKSHGSSDGIAVKNAVRQARTALQNRLVESISKEISRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG54</accession>
    <name>E3EG54_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Probable chemoreceptor glutamine deamidase CheD</fullName>
            <ecNumber evidence="3">3.5.1.44</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">cheD</name>
        <name evidence="4" type="ORF">PPSC2_09990</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>H2O + L-glutaminyl-[protein] = L-glutamyl-[protein] + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:16441"/>
            <dbReference type="Rhea" id="RHEA-COMP:10207"/>
            <dbReference type="Rhea" id="RHEA-COMP:10208"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29973"/>
            <dbReference type="ChEBI" id="CHEBI:30011"/>
            <dbReference type="EC" id="3.5.1.44"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CheD family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.44" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370698.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22460"/>
    <dbReference type="EnsemblBacteria" id="ADO56087">
        <property type="protein sequence ID" value="ADO56087"/>
        <property type="gene ID" value="PPSC2_09990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2104"/>
    <dbReference type="eggNOG" id="COG1871">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087854_2_0_9"/>
    <dbReference type="OMA" id="VGMADLN"/>
    <dbReference type="OrthoDB" id="1863047at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050568">
        <property type="term" value="F:protein-glutamine glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16352">
        <property type="entry name" value="CheD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01440">
        <property type="entry name" value="CheD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038592">
        <property type="entry name" value="CheD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005659">
        <property type="entry name" value="Chemorcpt_Glu_NH3ase_CheD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011324">
        <property type="entry name" value="Cytotoxic_necrot_fac-like_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35147">
        <property type="entry name" value="PTHR35147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03975">
        <property type="entry name" value="CheD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64438">
        <property type="entry name" value="SSF64438"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="17716" checksum="5C1D8146F7B9617F" modified="2011-01-11" version="1">MIEDKSIIKVGMADLNVTSNPNSIRTTGLGSCVGLTLYDPHLKLAGMAHVMLPSSDIAREGQLNIAKYADTALPELLERMLKLGAERRRLIAKMAGGAQMFAFAGSGDTMRIGPRNVESCKEMLVDLGIPLIAEDTGGNYGRTIELNSETGVLNIRSVQKGVKEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG72</accession>
    <name>E3EG72_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplC5</name>
        <name evidence="7" type="ORF">PPSC2_10775</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370871.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23170"/>
    <dbReference type="EnsemblBacteria" id="ADO56265">
        <property type="protein sequence ID" value="ADO56265"/>
        <property type="gene ID" value="PPSC2_10775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2282"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="WNHFLFA"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="143"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="261"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="77"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="33186" checksum="0131419E5DFA0E54" modified="2011-01-11" version="1">MQLLRRRTAGEAIFDLFNNVFMLVICFVTLYPVWYVLVNSFNEGADAMRGGIYWWPRLFSLSSYQAVFANSGIMTAMGVTVAKTLIGTIVHVFFTAMIAYAYSRRELIGRKLYMLIGTITLFFGGGLIPTYLLIRDLGLLDSFWVYIIPAMFSFFDLIIFMAFFRELPDALEEAAKIDGANDFGIFCRIVLPVSMPVVATIALFHGVYQWNDYFTGMIYINNTDLQPIQTYLYRVVAQSSSNQMMSAAPGIVAQSVTSQSIKLATMVITTLPIVLVYPFLQKYFVKGLMIGSVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGE5</accession>
    <name>E3EGE5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glyceraldehyde-3-phosphate dehydrogenase</fullName>
            <ecNumber evidence="8">1.2.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">gap</name>
        <name evidence="10" type="ORF">PPSC2_00950</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.-" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368817.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13940"/>
    <dbReference type="EnsemblBacteria" id="ADO54173">
        <property type="protein sequence ID" value="ADO54173"/>
        <property type="gene ID" value="PPSC2_00950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.177"/>
    <dbReference type="eggNOG" id="COG0057">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030140_0_0_9"/>
    <dbReference type="OMA" id="NCVAPMA"/>
    <dbReference type="OrthoDB" id="944149at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020831">
        <property type="entry name" value="GlycerAld/Erythrose_P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020830">
        <property type="entry name" value="GlycerAld_3-P_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020829">
        <property type="entry name" value="GlycerAld_3-P_DH_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020828">
        <property type="entry name" value="GlycerAld_3-P_DH_NAD(P)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006424">
        <property type="entry name" value="Glyceraldehyde-3-P_DH_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43148">
        <property type="entry name" value="PTHR43148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02800">
        <property type="entry name" value="Gp_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00044">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000149">
        <property type="entry name" value="GAP_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00078">
        <property type="entry name" value="G3PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00846">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01534">
        <property type="entry name" value="GAPDH-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00071">
        <property type="entry name" value="GAPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 8 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gp_dh_N" evidence="9">
        <location>
            <begin position="3"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Glyceraldehyde 3-phosphate binding" evidence="4">
        <location>
            <begin position="150"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Glyceraldehyde 3-phosphate binding" evidence="4">
        <location>
            <begin position="211"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="12"/>
            <end position="13"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>D-glyceraldehyde 3-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>D-glyceraldehyde 3-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="site" description="Activates thiol group during catalysis" evidence="6">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="336" mass="36301" checksum="BF9CA2450FD2D598" modified="2011-01-11" version="1">MTVKVGINGFGRIGRLAFRRIQDVEGIEVVAINDLTDSKMLAHLLKYDTTQGTFQGEVEVHDGFFKVNGKEVKVLANRNPEELPWGDLGVDIVLECTGFFTTKEAAEKHLKGGAKKVVISAPATGDMKTVVYNVNHEILDGSETVISGASCTTNCLAPMAKTLQDKFGIVEGLMTTIHAYTGDQNTLDAPHAKGDFRRARAAAENIIPNTTGAAKAIGLVIPELKGKLDGAAQRVPVPTGSLTELVTVLEKNVTAEEINAAMKEASDPETYGYTEDQIVSSDIKGLTFGSLFDATQTKVLTVGDKQLVKTVAWYDNEMSYTAQLIRTLEYFAKLAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK0</accession>
    <name>E3EGK0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaS1</name>
        <name evidence="5" type="ORF">PPSC2_03330</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369276.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16125"/>
    <dbReference type="EnsemblBacteria" id="ADO54639">
        <property type="protein sequence ID" value="ADO54639"/>
        <property type="gene ID" value="PPSC2_03330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.649"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="HFRERTH"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="192"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="34537" checksum="951AA0BCD1D66483" modified="2011-01-11" version="1">MNKKADEFERKKVYVLPPYMLNKLKTNPLTKNLYITDIGYFSHARHHFRERTHGCNSHIFIYCASGQGWVRTKDNLTIVLKERSFAYIPRDMPHAYGADDEDPWTIYWFHLQGDQMDDFMALFEPFKMYISMAASDEIKLLELFHQCYDLLLNKSYSMIHLVQVSQTIRYLLSFVVSVASRKEDSTYQSHVDKATRYMGEQLESTVSLDELSRYVQVSKQHLNLIFKQSTGYSPVDYYLRMKIQRASQLLDLTNASIKEISLQLGFRDPYYFSRLFKKIMGCSPLDYRHNLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK2</accession>
    <name>E3EGK2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YphG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yphG</name>
        <name evidence="1" type="ORF">PPSC2_03335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369278.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16130"/>
    <dbReference type="EnsemblBacteria" id="ADO54641">
        <property type="protein sequence ID" value="ADO54641"/>
        <property type="gene ID" value="PPSC2_03335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.651"/>
    <dbReference type="eggNOG" id="ENOG502Z80S">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_606757_0_0_9"/>
    <dbReference type="OMA" id="WDFSWYT"/>
    <dbReference type="OrthoDB" id="623669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024778">
        <property type="entry name" value="Put_cellulase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12876">
        <property type="entry name" value="Cellulase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="428" mass="49521" checksum="AEBE82F4C949D317" modified="2011-01-11" version="1">MTSLMRNVPHKLTITMWDFSWYTMTQEGEPYSDLEARFQEAVERGYNTIRICAMPFMLFTADGKRTGSLEFASLGKVGQRTRWYNCRGGAVLDGHAHLLELFRQAKAHNCYIILSSWEYQQSPTFLAHTELRDELAAIPPKERFMAIAKSMDQLIRFVTAEGYRDRIVYTELHNEVEFGQLNAVGTSVGIAETNIPALVEAMQPYVEEAIEYLRQCHPDMMMTASYTLNEAYPKAYVARNMQVAHFHLYIKGVLNELMEAAGLDDELAPFPNPFVQSLLREEAPPFAEWILPPEQNWRMEGNPVGMRLIYLHDWVDPDQWDLFLYDRYGDHKMAMLQKADSRLEEIHEWTRHSGIPIVIGEGYVGYTPLYAQFEEGPVGKYIAEYVLRKGMALGFWGMTLCSNCAPHHPFWNDIAWQRKWNQFILNSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGN3</accession>
    <name>E3EGN3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yndF5</name>
        <name evidence="5" type="ORF">PPSC2_03490</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369309.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16285"/>
    <dbReference type="EnsemblBacteria" id="ADO54672">
        <property type="protein sequence ID" value="ADO54672"/>
        <property type="gene ID" value="PPSC2_03490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.682"/>
    <dbReference type="eggNOG" id="ENOG502ZT3R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051140_0_1_9"/>
    <dbReference type="OMA" id="VEGLMWI"/>
    <dbReference type="OrthoDB" id="1421701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02887">
        <property type="entry name" value="spore_ger_x_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168438" evidence="4">
        <location>
            <begin position="28"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="401" mass="44514" checksum="81EEEFAE92431433" modified="2011-01-11" version="1">MNRVRVQSGLLGLMALLMCCTLSGCWSSSPVEDLNLETGIALDIAEESSQEKQINQEGGNYPKKDLITGTFQFVIPEESGGSNSSSPQAKKFFNITETGDSVFEMIREISLRTNRPPIGQHLKTVIISSSLLRKIPLYELLDFFLGDNDIRPSVQLLISTEKAGHALQEKIPGQIPAYILKDIFQNRKRNARLIKPMALVKVIGPMKGERSFILPNVITAENEIKLAGAGIIKGKTQTYGGYLNESEVEGLMWIKGDLKGGVLKSSDPKTGKNIAYEIKAVKSKIKAIVQGDDIFFQVKMTSEGRVSEVHKKNENLRNNNVLGQEESLFQEKVNSLAEQTVAKMQKLKVDVGGFGEALRIQHPKVWRKVKKDWDTTFSTIPVRFSTDIHIEDYGSSITTAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGQ7</accession>
    <name>E3EGQ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05635</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369774.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1161"/>
    <dbReference type="EnsemblBacteria" id="ADO55141">
        <property type="protein sequence ID" value="ADO55141"/>
        <property type="gene ID" value="PPSC2_05635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1147"/>
    <dbReference type="eggNOG" id="ENOG50306K8">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_197486_0_0_9"/>
    <dbReference type="OMA" id="HEKAPVY"/>
    <dbReference type="OrthoDB" id="1964175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="72" mass="8052" checksum="C66B14671E5E379B" modified="2011-01-11" version="1">MTLENQEKAPVHDGQEASGPRYTLEELKEHAESLFSVKEEVLAGAFFGAQDKLFTVAEAHTKIEQFMKAKVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGT6</accession>
    <name>E3EGT6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Luciferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ywcH1</name>
        <name evidence="3" type="ORF">PPSC2_05750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">To bacterial alkanal monooxygenase alpha and beta chains.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369802.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18715"/>
    <dbReference type="EnsemblBacteria" id="ADO55170">
        <property type="protein sequence ID" value="ADO55170"/>
        <property type="gene ID" value="PPSC2_05750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1176"/>
    <dbReference type="eggNOG" id="COG2141">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027853_9_0_9"/>
    <dbReference type="OMA" id="LMVAEQY"/>
    <dbReference type="OrthoDB" id="1003376at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019949">
        <property type="entry name" value="Luciferase_OxRdatse_group-1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03558">
        <property type="entry name" value="oxido_grp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="2">
        <location>
            <begin position="27"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="34618" checksum="DB6817BD020DBFF2" modified="2011-01-11" version="1">MQPQSLATNSLNLGVLDMVPLLSGNRPEQAVQWAVKLAKQAEAWGYTRYWTSEHHDMEGLASSSPEVLLSHIGAVTTTIQLGAGAILLPHYSPVKVAEWFHLLAALYPGRVELGLGRAPGGGPHASMALSGNFLQHVTELPQKMEALLALLEGSYEYEQTPVFARPMPEQPPALWMLGTNRKSAEYAAQYSTGYVFGQFMSEQHTEEMLSIYRSSFQPSTRMDKPRTMVAVGAVCASTDELAQQWAAQISLGDPAIRASWLVGTPSLIAERLRSLQVKYDNDEFLLVTPIPDYEQRLHSYQLIAETVNCSLDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGW8</accession>
    <name>E3EGW8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Multidrug MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">epsE3</name>
        <name evidence="4" type="ORF">PPSC2_05900</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial sugar transferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369834.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18865"/>
    <dbReference type="EnsemblBacteria" id="ADO55202">
        <property type="protein sequence ID" value="ADO55202"/>
        <property type="gene ID" value="PPSC2_05900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1208"/>
    <dbReference type="eggNOG" id="COG2148">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024920_1_0_9"/>
    <dbReference type="OMA" id="ERPFRMI"/>
    <dbReference type="OrthoDB" id="1759731at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003362">
        <property type="entry name" value="Bact_transf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02397">
        <property type="entry name" value="Bac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_transf" evidence="3">
        <location>
            <begin position="38"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="232" mass="26763" checksum="943E9D57B8FDF26C" modified="2011-01-11" version="1">MSSSRSNKAKVLSASVDVYSVAHGLERRQGWSVYPFVKRSMDIILSFIGIIVLCPVFLLVILLIKLEDPKGSALFYQIRIGKHERPFRMIKFRSMVSDAEARLSALLVENEIEGAMFKMRDDPRITRVGRFLRRTSIDELPQLFNVLRGHMSLVGPRPPLPREVHDYTMRDKLRLTVTPGCTGLWQISGRNHLSFDQMVELDLEYISRRSFRTDMIIMLKTFRVLLGSKDAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH83</accession>
    <name>E3EH83_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DEAD-box ATP-dependent RNA helicase CshA</fullName>
            <ecNumber evidence="6">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cshA</name>
        <name evidence="13" type="synonym">deaD1</name>
        <name evidence="13" type="ORF">PPSC2_08980</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">Oligomerizes, may be a member of the RNA degradosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DEAD box helicase family. CshA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370492.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21445"/>
    <dbReference type="EnsemblBacteria" id="ADO55874">
        <property type="protein sequence ID" value="ADO55874"/>
        <property type="gene ID" value="PPSC2_08980"/>
    </dbReference>
    <dbReference type="GeneID" id="66578143"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1892"/>
    <dbReference type="eggNOG" id="COG0513">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003041_21_1_9"/>
    <dbReference type="OMA" id="EYCTPIQ"/>
    <dbReference type="OrthoDB" id="626183at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006401">
        <property type="term" value="P:RNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010501">
        <property type="term" value="P:RNA secondary structure unwinding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01493">
        <property type="entry name" value="DEAD_helicase_CshA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030880">
        <property type="entry name" value="DEAD_helicase_CshA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6 8" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="Q_MOTIF" evidence="12">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="10">
        <location>
            <begin position="33"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="11">
        <location>
            <begin position="214"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="432"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="7">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="455"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="497"/>
            <end position="525"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01493"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO55874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="525" mass="58530" checksum="5E50E857FFCE0550" modified="2011-01-11" version="1">MTTFAEFDLEPKVIQAITELGFEEATPIQSKSIPIALQGKDMIGQAQTGTGKTAAFGIPMINKISKNDEKIRALIMAPTRELAIQVAEEIEKLSRFKGLRTLPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHINRKTIKLEDVNTVVLDEADEMLDMGFMEDIQSILKQVPDERQTMLFSATMPPNIKRLAEQFLKDPEHVSVIPKQVSAPLIDQAYIEVPERQKFEALSRLIDMESPELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGEAWSFVTPREIDHLHFIERVTRHRIPRKPLPTLAEALEGKQRIIAERLLEVVEKGELNEYKGLAIQMLEQYDSVQLLSAALKLMTGEKREASIELTPEDPIRAKRRKPDVRSGGRKPSNYSGRSNGGYNSNRGGSGSKGGYGGYNRGKEGGGYNRDSGSRYSGDRKPRPSSNGETRRPARREDSSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH84</accession>
    <name>E3EH84_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370493.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21450"/>
    <dbReference type="EnsemblBacteria" id="ADO55875">
        <property type="protein sequence ID" value="ADO55875"/>
        <property type="gene ID" value="PPSC2_08985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1893"/>
    <dbReference type="eggNOG" id="COG5578">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081578_4_0_9"/>
    <dbReference type="OMA" id="WVVVKLT"/>
    <dbReference type="OrthoDB" id="1967816at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006938">
        <property type="entry name" value="DUF624"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04854">
        <property type="entry name" value="DUF624"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="205"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="29056" checksum="09C47A32FD37F267" modified="2011-01-11" version="1">MEFKGAMGGIYRLTEWITRLAASNLLWVLCSSPFVFCLILKLLVMNQNLANESLQMNWAMAILAPLTLFPATSALFAVVRKWVMGDTDTGVFRTFFKGYKENYKQSLIGGIFYTLLFVVMYVDYTVYMTQLSNLQIVGVIMLILIIILLVSMFNFFSMVVHYHMSTGQIIKNAVLLTLIRPFRVFSTMLGSAVVIYIGVKYPVLFLFFIGSVVAWFAFFNFYGTFLKMQDQMEKMKQKDEEKASMEDKKSDNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHB1</accession>
    <name>E3EHB1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Xanthine phosphoribosyltransferase</fullName>
            <shortName evidence="1">XPRTase</shortName>
            <ecNumber evidence="1">2.4.2.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xpt</name>
        <name evidence="3" type="synonym">xpt1</name>
        <name evidence="3" type="ORF">PPSC2_09110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>diphosphate + XMP = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine</text>
            <dbReference type="Rhea" id="RHEA:10800"/>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; XMP biosynthesis via salvage pathway; XMP from xanthine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the purine/pyrimidine phosphoribosyltransferase family. Xpt subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.22" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370519.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21580"/>
    <dbReference type="EnsemblBacteria" id="ADO55902">
        <property type="protein sequence ID" value="ADO55902"/>
        <property type="gene ID" value="PPSC2_09110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1920"/>
    <dbReference type="eggNOG" id="COG0503">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_099015_0_0_9"/>
    <dbReference type="OMA" id="TMEMGRE"/>
    <dbReference type="OrthoDB" id="1532478at2"/>
    <dbReference type="UniPathway" id="UPA00602">
        <property type="reaction ID" value="UER00658"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000310">
        <property type="term" value="F:xanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046110">
        <property type="term" value="P:xanthine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032265">
        <property type="term" value="P:XMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01184">
        <property type="entry name" value="XPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010079">
        <property type="entry name" value="Xanthine_PRibTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01744">
        <property type="entry name" value="XPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="2">
        <location>
            <begin position="41"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phospho-alpha-D-ribose 1-diphosphate binding" evidence="1">
        <location>
            <begin position="128"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>xanthine</name>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>xanthine</name>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>xanthine</name>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="190" mass="20991" checksum="FBDF08D30DED4FDA" modified="2011-01-11" version="1">MEVLKKRILNEGVIASDQVLKLDGLLNHQVDPELTMEMGREFAARFREEKITRVVTVESSGIAIGFATALELGVPLVFARRKKTLLADPDALCERVPSFTKGIVTDIMLSRQFIHEHDRVLFIDDIIANGDAARGMVKIIQRSGAELIGFGVAVEKMFQAGARTIREQGIRVESLVKISSLADGKIEFAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC8</accession>
    <name>E3EHC8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yobV7</name>
        <name evidence="4" type="ORF">PPSC2_09190</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55919.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599640.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21660"/>
    <dbReference type="EnsemblBacteria" id="ADO55919">
        <property type="protein sequence ID" value="ADO55919"/>
        <property type="gene ID" value="PPSC2_09190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1937"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041141_5_1_9"/>
    <dbReference type="OrthoDB" id="1654295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028349">
        <property type="entry name" value="PafC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016838">
        <property type="entry name" value="PafC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="3">
        <location>
            <begin position="2"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55919.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="35692" checksum="17AF861B36D72B92" modified="2015-05-27" version="2">MKIDRLLSIVILLLKRNRIQAKELADLYEVSIRTIYRDIEAISLAGIPVVTFQGAGGGIGLMEGYRLDRSMLTDHDIKDIVMGLQSLSSSLGGPNVSRLLHKFESIIPESEKEQFSVRTTQFIVDHSGWGNQSVQEAKLIKVKEAMSQARTVAFIYRNAEGTRTKRNVEPHTLVLKGQQWFVYAYCPDRGQFRLFKLARMSEPVVTETAFTRRDLSDEVLPWNEGRMTASRDVQPFTLQFNRNSRHLGEDWFGVEALSEQEEGIYTVSVPFPEDAWVYGFILSLGPDVVVKEPAHLRDKIHKMALRIASNYEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHW7</accession>
    <name>E3EHW7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371064.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2488"/>
    <dbReference type="EnsemblBacteria" id="ADO56459">
        <property type="protein sequence ID" value="ADO56459"/>
        <property type="gene ID" value="PPSC2_11690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2473"/>
    <dbReference type="eggNOG" id="ENOG50348W1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_166692_0_0_9"/>
    <dbReference type="OMA" id="MLICYST"/>
    <dbReference type="OrthoDB" id="1877421at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="14318" checksum="52C1644006AD2F40" modified="2011-01-11" version="1">MLFITKKLIDKLAEPYRESDMLICYSTPQSFSAYTSRAILLLNNDRIIILFLNLFSTKVVQKVEYEIADLQEQKYHSGHLSSAVWSFKIKGQHSRFRIIKKILTLGSMQRDFLNFLQQNILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHY2</accession>
    <name>E3EHY2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Teicoplanin resistance protein VanZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">vanZ</name>
        <name evidence="3" type="ORF">PPSC2_11760</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371079.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2503"/>
    <dbReference type="EnsemblBacteria" id="ADO56474">
        <property type="protein sequence ID" value="ADO56474"/>
        <property type="gene ID" value="PPSC2_11760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2488"/>
    <dbReference type="eggNOG" id="COG4767">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_948840_0_0_9"/>
    <dbReference type="OMA" id="YFMFFAF"/>
    <dbReference type="OrthoDB" id="1057845at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006976">
        <property type="entry name" value="VanZ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04892">
        <property type="entry name" value="VanZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="VanZ" evidence="2">
        <location>
            <begin position="13"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="34727" checksum="2FC0680442C0D5C7" modified="2011-01-11" version="1">MVKKRKILLTATIVYTIIVLYFMFFAFGRGEASEQISSYTFIFMPENFISLPSPADLLHPSLMSMVAFGNTIAFIPFGILIPWLYRVSFVRFITLFFIAILVLETIQALTFLGSFDINDALQNSIGAALGFGAYKLGFRYRSLGRNLVATAISGMVLFIALWGLGAAVDKITTKVEGPFVAITEWTDNSGNSSTGDKPDSIQINGQKIPLRYNLYGAEGGDSRTFTYKSEGQTIFSFDYGCPEPTDYSGSISVTRDGKEIMSNSGELQRTNPDLFPSLFKIPLEPGDELKITIKGDMKAWDVGYTRMQYFWN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHY5</accession>
    <name>E3EHY5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl hydrolase family 16</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bglA3</name>
        <name evidence="3" type="ORF">PPSC2_11770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371082.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2506"/>
    <dbReference type="CAZy" id="GH16">
        <property type="family name" value="Glycoside Hydrolase Family 16"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56477">
        <property type="protein sequence ID" value="ADO56477"/>
        <property type="gene ID" value="PPSC2_11770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2491"/>
    <dbReference type="eggNOG" id="COG2273">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019533_0_3_9"/>
    <dbReference type="OMA" id="SWPAIWM"/>
    <dbReference type="OrthoDB" id="1046649at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000757">
        <property type="entry name" value="GH16"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00722">
        <property type="entry name" value="Glyco_hydro_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51762">
        <property type="entry name" value="GH16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168224" evidence="1">
        <location>
            <begin position="27"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="GH16" evidence="2">
        <location>
            <begin position="22"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="29011" checksum="B2F3D7AB9532A8A8" modified="2011-01-11" version="1">MLRKGLCAVVLLSLLTVLLPAMHTSAAPNSNLVWSDEFNGTSLNRSNWTPEIGTGSGGWGNNELQYYTNRAQNLQVTGGNLVITAQKEAYGGMNYTSARIKTQDLKKFTYGKVEARIKLPSGQGIWPAFWMLGSNISSVGWPKCGEIDIMERVNNNPSVNGTVHWDAGGHADFGRVSGNLDFSQYHVYSIEWDSKYIRWFVDGQQFNEFYIENGTGNTEEFQQPFFILLNLAVGGNWPGAPNNSTQFPSQMLVDYVRVYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ1</accession>
    <name>E3EHZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371088.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2512"/>
    <dbReference type="EnsemblBacteria" id="ADO56483">
        <property type="protein sequence ID" value="ADO56483"/>
        <property type="gene ID" value="PPSC2_11800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2498"/>
    <dbReference type="eggNOG" id="ENOG50331IP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_123234_1_0_9"/>
    <dbReference type="OMA" id="CAFGTDS"/>
    <dbReference type="OrthoDB" id="1481895at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025409">
        <property type="entry name" value="DUF4303"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14136">
        <property type="entry name" value="DUF4303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="20611" checksum="3F232E2F820EF7DB" modified="2011-01-11" version="1">MSNFLSEFEERFRAGFLEDLKSILEEVKDEKVYACAFGTDSDFVTLFLAVNTEESLVRHITNMKAQDLCNSKEDEIYYRWGLSEYQYGDTTHLNHISKFLYATDNVLDYKDEMIKIMAKVVKETDDVFFTQFGQSKEDIIFFVSMTDDDMAEELEDQSVIQMTNAKLVDGFLHRYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI50</accession>
    <name>E3EI50_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD(P)H dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-870</name>
        <name evidence="2" type="ORF">PPSC2_03700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369354.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16520"/>
    <dbReference type="EnsemblBacteria" id="ADO54718">
        <property type="protein sequence ID" value="ADO54718"/>
        <property type="gene ID" value="PPSC2_03700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.728"/>
    <dbReference type="eggNOG" id="COG2249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058643_1_0_9"/>
    <dbReference type="OMA" id="IGIAQSM"/>
    <dbReference type="OrthoDB" id="1143659at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="21278" checksum="A070AFD65482EAF7" modified="2011-01-11" version="1">MKHLIIYAHPSEGSFNHAILTTAVEGLKQKGHDVVVRDLYDIGFQPVVSSSEIIGGIGEDIVREQQFLQWAEVITFIYPIWWTGMPAIMKGYIDRVFSYGFAYKYVNGVQMGLLKGKKVIILNTQGKSHAEYASNGMDQALRLTSDKGIFEYCGLDVMYHLFFESVPQSDEDTRKTWLRQIADMASKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIC5</accession>
    <name>E3EIC5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">tRNA threonylcarbamoyladenosine biosynthesis protein TsaE</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydiB3</name>
        <name evidence="5" type="ORF">PPSC2_06070</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TsaE family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369870.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19035"/>
    <dbReference type="EnsemblBacteria" id="ADO55238">
        <property type="protein sequence ID" value="ADO55238"/>
        <property type="gene ID" value="PPSC2_06070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1244"/>
    <dbReference type="eggNOG" id="COG0802">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087829_3_0_9"/>
    <dbReference type="OMA" id="FTDDAIC"/>
    <dbReference type="OrthoDB" id="1827295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002949">
        <property type="term" value="P:tRNA threonylcarbamoyladenosine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003442">
        <property type="entry name" value="T6A_TsaE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02367">
        <property type="entry name" value="TsaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00150">
        <property type="entry name" value="T6A_YjeE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00032441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="17624" checksum="EC7AE84D4B1F7A65" modified="2011-01-11" version="1">MTISQEQFVFRSVSEAQTGTLAGFLAAQAVPGTVIVLDGDLGAGKTAFSKAFASHLGVPGIVNSPTFTLIKEYEGRLPLYHMDVYRISQDEAEDLGLDEYFYGTGVCLVEWGSIIPDMLPDQRLHMYIETTDVGERLIHLTGYGEPYEQWCRILRENGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG9</accession>
    <name>E3EIG9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">PhoP family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ycbL</name>
        <name evidence="9" type="ORF">PPSC2_06260</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369913.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19215"/>
    <dbReference type="EnsemblBacteria" id="ADO55282">
        <property type="protein sequence ID" value="ADO55282"/>
        <property type="gene ID" value="PPSC2_06260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1290"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OMA" id="WGGDTRV"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="135"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="135"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="26874" checksum="2E3F01D1D6507070" modified="2011-01-11" version="1">MPQHILLIEDDLSIAEMLLKALTKEGYNLTTASDGEEGLNAFERHTYDLVLVDLMMPKVDGMEVIRQIRTRSAVPILIMSAKDSDVDKALGLGFGADDYVAKPFSMLEMTARIQSAIRRSTTYARLQQQEEQPQAQVLTYGNLRIDFDHFTVIRDGNEIQLTAKESDILKLFASNPNRVFTKAQLYGFIWKDDYMGDENVINVHIRRLREKIEEDPSHPVHIKTLWGIGYKWENG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIU2</accession>
    <name>E3EIU2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Darcynin 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_09385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the darcynin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370578.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21855"/>
    <dbReference type="EnsemblBacteria" id="ADO55961">
        <property type="protein sequence ID" value="ADO55961"/>
        <property type="gene ID" value="PPSC2_09385"/>
    </dbReference>
    <dbReference type="GeneID" id="66578061"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1978"/>
    <dbReference type="eggNOG" id="ENOG50305ZM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_165974_1_0_9"/>
    <dbReference type="OMA" id="WEEIRDS"/>
    <dbReference type="OrthoDB" id="1808462at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031409">
        <property type="entry name" value="Darcynin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17074">
        <property type="entry name" value="Darcynin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="13699" checksum="E14DB18D3DA2078B" modified="2011-01-11" version="1">MRYMMIVLLEFYPSWLALPREERRKHAGALQARIQKYSEHVQVRFFDAEALPGKDYTDFVVCETEDMKQYHYMWEEIRDSEPYTKGYMKIKDVVMGMENAFQSYESEMLQMDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIW6</accession>
    <name>E3EIW6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cobalamin-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">metSY</name>
        <name evidence="2" type="ORF">PPSC2_09500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370602.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21970"/>
    <dbReference type="EnsemblBacteria" id="ADO55985">
        <property type="protein sequence ID" value="ADO55985"/>
        <property type="gene ID" value="PPSC2_09500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2003"/>
    <dbReference type="eggNOG" id="COG5012">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064060_0_0_9"/>
    <dbReference type="OMA" id="YYLGANV"/>
    <dbReference type="OrthoDB" id="1467120at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003759">
        <property type="entry name" value="Cbl-bd_cap"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036594">
        <property type="entry name" value="Meth_synthase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02607">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="1">
        <location>
            <begin position="227"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="354" mass="40063" checksum="9BA2C3B2CE2E0AB2" modified="2011-01-11" version="1">MSIQQYTAGESLLMQAGGLAELVTHKQYELQPDLLERFGDNGKIKTKQDSIYSLNYLAESVIVNSPILFTYYVSWLKRLLEGFGITQEDLIINFQLIRETLVEHFHHTDKTTVLMHLELGIQQIGKKEEYASFITDDNPYAADVAQYLEYLLLGNRRQALDWIVHLLDEGTSIQHTYKYIFQISQYEIGRLWHEGKITVGQEHFCTAATQFIISSLYPRWIGTGNKGRSLVAACVGSEQHEIGLRMLADIFEMDGWDTYYLGANVPDRSLLQAIVSYNADVVAISATMAYHVHLVKKLITVIRQNTTTSHVKIMVGGLPFNLDSHLWQEVGADGYAPGAEEALEVAEDILSLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIX2</accession>
    <name>E3EIX2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09530</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370608.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22000"/>
    <dbReference type="EnsemblBacteria" id="ADO55991">
        <property type="protein sequence ID" value="ADO55991"/>
        <property type="gene ID" value="PPSC2_09530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2009"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1234513_0_0_9"/>
    <dbReference type="OMA" id="SSCEAYY"/>
    <dbReference type="OrthoDB" id="1554752at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="170"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="26267" checksum="EB30A12E42302052" modified="2011-01-11" version="1">MIGKFLIFSLLWSLLGNPFLAMLVLLIVIYILDRSFVGVLPSISKPWKRRRNAARLRQQIVLNTNDVAAKFDLARIWIESKKYSQALELLLEIQSRYEDSADYWNARGTAEVHTTHLEDGEQHLLKALDINPRVQYGEPYLHLAAAFKERDVNKSLHYLQHFQEIQSSSSEGYYLTGLMYRMLGRKDEAITAFNQSIAVYRSLPKYRKRSERKWAARSLFRKIIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ03</accession>
    <name>E3EJ03_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-ketoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG9</name>
        <name evidence="1" type="ORF">PPSC2_10430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370790.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22895"/>
    <dbReference type="EnsemblBacteria" id="ADO56184">
        <property type="protein sequence ID" value="ADO56184"/>
        <property type="gene ID" value="PPSC2_10430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2198"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_0_9"/>
    <dbReference type="OMA" id="RSHVICP"/>
    <dbReference type="OrthoDB" id="1356861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="269" mass="28618" checksum="4C1A4B32A4ACF4DE" modified="2011-01-11" version="1">MSYTYAGGARFEGKTALITGAGSGIGKATAIQMAREGANVALFDVSNDRILETEREINAIREGAARAFDVDIADPVRVEKAVLEAVELFGGLHIIFANAGINGVVGPIEELSIEDWRQTLSTNLDGTFLTVKYTIPHLKKNGGGSIIITSSINGNQRFTSFGMSAYSTSKAGQTGFAKMAALELAKFRIRVNVIYPGAISTNIDETTEKSEGLKQITIPVQFPEGDQPLADGPGQPEQVADLVTFLASDHSRHITGAQIVIDGAESLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ38</accession>
    <name>E3EJ38_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Low temperature-induced protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370825.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22970"/>
    <dbReference type="EnsemblBacteria" id="ADO56219">
        <property type="protein sequence ID" value="ADO56219"/>
        <property type="gene ID" value="PPSC2_10575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2235"/>
    <dbReference type="eggNOG" id="COG3861">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083853_1_1_9"/>
    <dbReference type="OMA" id="DERAEGW"/>
    <dbReference type="OrthoDB" id="1942926at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025889">
        <property type="entry name" value="GSP17M-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11181">
        <property type="entry name" value="YflT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YflT" evidence="1">
        <location>
            <begin position="14"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF11181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="20160" checksum="8592F9933DFE9C7A" modified="2011-01-11" version="1">MANNLNDYNEKKIVGVFDTEQEASRAIGQLQSKGIPSSEISVITRDRDDLRTISEETGTKAPEGVATGAATGGVVGGVAGLLAGIGALAIPGIGPILAAGPIAATLTGAAVGAGAGGLVGGLVGLGIPEDDARQYETYVDQGKILVLVDSADHHRDVYDIFRTNRSLNADRYRTYDDTVADTRTDAYTDTRRNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC8</accession>
    <name>E3EJC8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mannose-1-phosphate guanylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">manC3</name>
        <name evidence="3" type="ORF">PPSC2_11490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371020.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23855"/>
    <dbReference type="EnsemblBacteria" id="ADO56415">
        <property type="protein sequence ID" value="ADO56415"/>
        <property type="gene ID" value="PPSC2_11490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2429"/>
    <dbReference type="eggNOG" id="COG0662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0836">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035527_1_0_9"/>
    <dbReference type="OMA" id="ELKKHDP"/>
    <dbReference type="OrthoDB" id="224217at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005976">
        <property type="term" value="P:polysaccharide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001538">
        <property type="entry name" value="Man6P_isomerase-2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01050">
        <property type="entry name" value="MannoseP_isomer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="domain" description="MannoseP_isomer" evidence="2">
        <location>
            <begin position="300"/>
            <end position="438"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="447" mass="49300" checksum="D97E0FF0AF50FD68" modified="2011-01-11" version="1">MRIVLLCGGAGKRLWPLSNDIRSKLFLRLLPAPDGQQESMLGRVYRQLTLAGLDSSALLLAHRSQVNLAFRHTEGRLPVLGEPAKRGTFTAAALAAAYFHTRGMGLDEVLCIAPADMFAGDDFFHSIAALSGLLLESGADLAMLGTRPTHASDQYGYIVPDLQMRQEGKSAYAQVARFTEKPDLSWAKQLINQGALWNCGIYAFTLRYMLSCMEQIQLPLNDEELYTIYDSLPVRSFDEEIAERTERAVVLPYEGEWHDIGNWQALTEQLGSRVIGRGQISGQTHGTHIVNELPYPLHVIGVEDIIAAASPDGILIASKSHAHAIKEQLGNLQLHPMHGETSWGSYRVLDEFDHRSPNDILAIRLTVLPDHRLNGRIHGSGLKVWTIVSGRGEVMLNGERFAAASGSVFSIPVDTYHTIRADLDTALELIEVRLGHSLVSAFYKSDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC9</accession>
    <name>E3EJC9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11495</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371021.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23860"/>
    <dbReference type="EnsemblBacteria" id="ADO56416">
        <property type="protein sequence ID" value="ADO56416"/>
        <property type="gene ID" value="PPSC2_11495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2430"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_958516_0_0_9"/>
    <dbReference type="OMA" id="QPEYFRT"/>
    <dbReference type="OrthoDB" id="923419at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045499">
        <property type="entry name" value="DUF6492"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20102">
        <property type="entry name" value="DUF6492"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="32522" checksum="F4A02590A8883052" modified="2011-01-11" version="1">MSAQSDEPQKGSLSIDVLIPAIEKDLATLPLVIDSLRRHVQHRIATIYIVSPQSTKLRRLCANKKCTFIDEKTVLPITKKHIRYGTTRWDRSGWLYQQLLKMNGDKISKSSFFLVIDADTILIRPHTFRKDGKTIFYYRSWSQPEYFRTYRKLMGAKAPSPKSFVTHYMLFEKTRLAQLKQVIETRHGEPWYNAIIQSIDRTKQFGFSEYETYANYLYSNQPSRMILRKSLNKALHSRASSLSPKQLDLYAQSYRSLSFHQRKVYQLAPKTKIQSALK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJH2</accession>
    <name>E3EJH2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yclE</name>
        <name evidence="2" type="ORF">PPSC2_12000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371126.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24320"/>
    <dbReference type="EnsemblBacteria" id="ADO56522">
        <property type="protein sequence ID" value="ADO56522"/>
        <property type="gene ID" value="PPSC2_12000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2538"/>
    <dbReference type="eggNOG" id="COG0596">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_50_0_9"/>
    <dbReference type="OMA" id="YVETHGN"/>
    <dbReference type="OrthoDB" id="1282004at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="29"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="33209" checksum="83DE4E9844D78B58" modified="2011-01-11" version="1">MSTYQTVISDGFELKYTIRGNGKPILVIGSSVYYPRLFSDHLYKKFRFIFLDHRGFAKPTRALKPEDYTLDKVINDLETARRCLHLDTFIILGHSGHAFMALEYAKQFPGYVEKVVLLNSAPTNSQERQRQSFSFFYETASPERKDRFEKEIALLENDIKREPDRRFVHMCIRMGAQSFYDYTYDAAYMWNDVHTNMPIIDYLWGEAFGKMDLIQSLADVDKPVFIGLGRSDYLVAPVSLWDRVDDSYTNVKKVVFEHSGHNPMFEEPHYFDQTLTEWINENH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJI8</accession>
    <name>E3EJI8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">araC2</name>
        <name evidence="5" type="ORF">PPSC2_12075</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371142.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2568"/>
    <dbReference type="EnsemblBacteria" id="ADO56538">
        <property type="protein sequence ID" value="ADO56538"/>
        <property type="gene ID" value="PPSC2_12075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2554"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047522_1_1_9"/>
    <dbReference type="OMA" id="TVNEGMW"/>
    <dbReference type="OrthoDB" id="1622875at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032687">
        <property type="entry name" value="AraC-type_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12625">
        <property type="entry name" value="Arabinose_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="234"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="350" mass="40014" checksum="8F185C78B18EF43D" modified="2011-01-11" version="1">MKKTHTSDHIKIPPGFWTGLHELGISAHDVAHKARLPLNIMTEPVVTPAQYFAIWQAYSDLIGDTAKGIIKLATVFETTKYPPTVLACYHARNYRDALNRMARYKQLCPPETLRITEEGEHCTIELEWLYTEQPGPPMLVGITLACLLELGRRGTGQPLTAQLVEFSQSMGDVQALEAYFGCRIRIDAKCNRMTLHRRDLDLPFVSYNEELLEILTPVLDRSLAEQQRNCSITEMVKWIIKRSLTGGRPDIEAIAKELNMSDRTLQRRLTDQNTNFKHLLTQARHEQARKYLADPSLDIKEVAFLIGYEDQNSFYRAFRLWEGDTPLNWRTKHLAANSISEGQLGRPSIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJT4</accession>
    <name>E3EJT4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26705</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386096.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0291"/>
    <dbReference type="EnsemblBacteria" id="ADO59682">
        <property type="protein sequence ID" value="ADO59682"/>
        <property type="gene ID" value="PPSC2_26705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5643"/>
    <dbReference type="HOGENOM" id="CLU_2881684_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7585" checksum="640D4250C04472A4" modified="2011-01-11" version="1">MREYKINVRNEDLEFNFYSDDVDLHVYDAIIFNRVTFFLSQKMNENQFKTFKVGQVVNPSESN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJZ8</accession>
    <name>E3EJZ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386431.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO60017">
        <property type="protein sequence ID" value="ADO60017"/>
        <property type="gene ID" value="PPSC2_28095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5956"/>
    <dbReference type="HOGENOM" id="CLU_2918391_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="7117" checksum="EB0A7F28BD2EFD0E" modified="2011-01-11" version="1">MKEKVTAKQETNAASGKEMYSLAIQDFIKMTRNDPSFFKLSPEEQKQKAMEYVQKVKEKTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK61</accession>
    <name>E3EK61_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386184.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59770">
        <property type="protein sequence ID" value="ADO59770"/>
        <property type="gene ID" value="PPSC2_26315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5543"/>
    <dbReference type="eggNOG" id="ENOG50334X3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_741729_0_0_9"/>
    <dbReference type="OMA" id="IMADICK"/>
    <dbReference type="OrthoDB" id="2139175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="376" mass="43303" checksum="7F7406B7044CC4FA" modified="2011-01-11" version="1">MHSFDFKAQTIERSFLRKINNQPAYKTGTGKLNYVTSYNRSVIKIRTLAGKTEQSISRKGLRKAISYLLYKKTATRRELEKYSNMNSALMGLLQRIFIQTAKIVKTAKGLLRITIKGVRFFFSGLDRACIHDLETVVKKGGRFILCSFYYLRDYKSKRLLDFIKKFNVQLLIDSGEFSVYKARMKGKKVENISVKEYADFILTFKDYIFGYFNLDVTNDPKKSKAHFEKLKKATGIAPIPIWHPNVNDWAQSDWTGLDQLVKEDHAVIGIGATVHMGLKAGPRLMTKVKDSLFNEIFTRHPLENFHWLGGSSKIICKYPFFSSDSSGYLQGRRKHQVYYYDGKDISTRIDPKQDRYECLSDNVQILSSLECLTGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK71</accession>
    <name>E3EK71_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386194.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0390"/>
    <dbReference type="EnsemblBacteria" id="ADO59780">
        <property type="protein sequence ID" value="ADO59780"/>
        <property type="gene ID" value="PPSC2_26265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5531"/>
    <dbReference type="eggNOG" id="ENOG5034A9H">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2274558_0_0_9"/>
    <dbReference type="OrthoDB" id="2203722at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="11921" checksum="71D57C5047A00EEF" modified="2011-01-11" version="1">MKVYQIEKYAIAAENAEKAYMCWLDTNDVDFLCDMLTLEEGGVEELTITISRLTAEQINTVDIPCCNDGCLRCEGKDENVYLSYAELIKEHQAQGGSFPTVLTKDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK96</accession>
    <name>E3EK96_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA polymerase III subunit alpha</fullName>
            <ecNumber evidence="3">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PPSC2_27945</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="13 14">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
            <plasmid evidence="13 14">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="11">DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DNA polymerase type-C family. DnaE subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="3"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59423.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0029"/>
    <dbReference type="EnsemblBacteria" id="ADO59423">
        <property type="protein sequence ID" value="ADO59423"/>
        <property type="gene ID" value="PPSC2_27945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5921"/>
    <dbReference type="eggNOG" id="COG0587">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001600_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011708">
        <property type="entry name" value="DNA_pol3_alpha_NTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041931">
        <property type="entry name" value="DNA_pol3_alpha_thumb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040982">
        <property type="entry name" value="DNA_pol3_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029460">
        <property type="entry name" value="DNAPol_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004013">
        <property type="entry name" value="PHP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003141">
        <property type="entry name" value="Pol/His_phosphatase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004805">
        <property type="entry name" value="PolC_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294">
        <property type="entry name" value="PTHR32294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07733">
        <property type="entry name" value="DNA_pol3_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17657">
        <property type="entry name" value="DNA_pol3_finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14579">
        <property type="entry name" value="HHH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02811">
        <property type="entry name" value="PHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00481">
        <property type="entry name" value="POLIIIAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="SSF89550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00594">
        <property type="entry name" value="polc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-0614">Plasmid</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="POLIIIAc" evidence="12">
        <location>
            <begin position="4"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00026073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO59423.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1160" mass="132559" checksum="FD382C93A5F4F9F8" modified="2015-05-27" version="2">MRWADLHRHSGYSLLDGGSKISDIVRKTEYAGAITDHGAMFGTLEYYKQMRKAGKLPILGFEAYAETIQGEKKGNHLLLLAKNEEGFKNLVKLTSKSQENFFRKPHVNYDMLGTYGKGIISSTSCMGSEVSQLLLKNKYEDAKYVAKALAEIFGKEDYYVELQRHGFDEERIVNPQLIQIARELDLKIIGTTDSHYTEKEDAYDHEVLLCIGTVKKMSDYDRMQFPGTGYHLHTSDEVEELFSDIPEALENTLEIAEKCSGLTLEMNKVYMPKFNVPAPFVNEMDYLKHLAWQGFKERFEGTEKDNEEYRERLTFELEVIKGMGFPGYFLIVGDFVDFAKRKGILVGPGRGSVVGALTAYCLHITDLDPIPLGLLFERFLNPDRVSMPDIDMDFPDDRREEVIDYVKNKYGEHAVSRIITFGTMAARAAIKDVGRVLDYPVSMTAKIAKSIPAVPKMTIKKAFKESPEFLKMYETEADVKKIVDIAMKLEGLPRHASMHACGVVIAPSSISDYIPEILMENKETKLKERTTQFNMAECEEMGILKMDFLGLRTMTVISKSLSNVNPRRIREGKKPLHYLDIPLNDKRVYQDIAKGESYGVFQLESGGMRSFMKELFADALQTGENTMELFERLIAGVSLYRPGPLDYIPDYLKNMQNPENIQYDHPKLKSILEFTYGVIVYQEQCMFIVRELADFTKGEADNVRKAFSKKKEKMIKPLGEKFVAGCLKKGISQEVAERIWGKMRKFGEYAFNKSHAGAYSVLSVVTAWLKFYYPVEFMTAVLNSYINKADKLKLFLSVVKKMKIEILPPDVDRSGQMFTVDGDRIRFGLQGIKGLGKASENVIEERAANGEFEDFQDLAERMAKHSKVDKKILEAMVYSGSVDSFPGTRSAKLEVLDKILASASDEKKMHNSGQMDLFSMYEEFKVYKKIVIPDKKEFHKKFKLEKEKEYAGFYISEHPLDEYASYFAREGVYEIGFIKHEEDEDETIEVEGEVFGGDTNYDGEVVKVAGIITDLKTFYTKRDQKELKVFTLEDRTGEMKVVCFADRIDANREKIVEGKVVMIQGQVKVDDYDTQIIVKNMFDIEQIAKSEKPKSIWVKSHNQKQVKSLFNFVKENKGNLPVYVLYQGQAYQSKHSFDLNYANFAKLQDMFGHNVKVLYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKB9</accession>
    <name>E3EKB9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Signal peptidase I</fullName>
            <ecNumber evidence="4 6">3.4.21.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_27830</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="8 9">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
            <plasmid evidence="8 9">pSC2</plasmid>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins.</text>
            <dbReference type="EC" id="3.4.21.89"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Membrane</location>
            <topology evidence="6">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the peptidase S26 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.89" evidence="4 6"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385860.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0052"/>
    <dbReference type="EnsemblBacteria" id="ADO59446">
        <property type="protein sequence ID" value="ADO59446"/>
        <property type="gene ID" value="PPSC2_27830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5898"/>
    <dbReference type="eggNOG" id="COG0681">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028723_5_3_9"/>
    <dbReference type="OMA" id="IEPRWIP"/>
    <dbReference type="OrthoDB" id="1741894at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000223">
        <property type="entry name" value="Pept_S26A_signal_pept_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019758">
        <property type="entry name" value="Pept_S26A_signal_pept_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019757">
        <property type="entry name" value="Pept_S26A_signal_pept_1_Lys-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43390">
        <property type="entry name" value="PTHR43390"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10502">
        <property type="entry name" value="Peptidase_S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00727">
        <property type="entry name" value="LEADERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02227">
        <property type="entry name" value="sigpep_I_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00760">
        <property type="entry name" value="SPASE_I_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00761">
        <property type="entry name" value="SPASE_I_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0614">Plasmid</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S26" evidence="7">
        <location>
            <begin position="22"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR600223-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF10502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="181" mass="20655" checksum="75E47B8BB9B32C73" modified="2011-01-11" version="1">MKHEHKDYTDQQEVSAKKEVFSWFKIILFAFFVTLVISYFIKPTLVSGRSMYPTLENNDYLILNKVAYQTGDPSRGDIVVFNSHLVGEKILIKRVIATGGEKITVKDGKVYINDKLINEPYLKGVETFGDVDTIVPKNKVFVMGDNRGNSIDSRRSEVGFVDKSEILGKVWFRVFPMKGIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKI8</accession>
    <name>E3EKI8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386234.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0430"/>
    <dbReference type="EnsemblBacteria" id="ADO59820">
        <property type="protein sequence ID" value="ADO59820"/>
        <property type="gene ID" value="PPSC2_26075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5487"/>
    <dbReference type="HOGENOM" id="CLU_2317605_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11340" checksum="91F94A34A3C281DE" modified="2011-01-11" version="1">MSKVLAKIIKDSKAMVNLNDTVADTINNFQTYVDNLNELARDQKFREAYHLLSKISIDCEDAMRVIAFKLDGDIELDEEYQLTDAEYGLHKLQLSPDQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELC0</accession>
    <name>E3ELC0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AAA_23 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_28425</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386366.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0563"/>
    <dbReference type="EnsemblBacteria" id="ADO59952">
        <property type="protein sequence ID" value="ADO59952"/>
        <property type="gene ID" value="PPSC2_28425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6029"/>
    <dbReference type="eggNOG" id="COG0419">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_393727_0_0_9"/>
    <dbReference type="OMA" id="RIDECNN"/>
    <dbReference type="OrthoDB" id="1137363at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038729">
        <property type="entry name" value="Rad50/SbcC_AAA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13476">
        <property type="entry name" value="AAA_23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_23" evidence="3">
        <location>
            <begin position="15"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="678"/>
            <end position="700"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="247"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="373"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="482"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="685"/>
            <end position="700"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="700" mass="80662" checksum="B15590F0C2842C42" modified="2011-01-11" version="1">MSTLLKSFKLIQLIKVQVQGFRGFKDTVTIPFDLGKNEFLGDNGKGKSSIGELLAWIMTGRNIAGKQKEINVINKDTESVVGILTFMDQDGNMHELERKQTSSMSIKLDYETIPQKRLEELIPMDLFLSAFNPMFLLSLDESILRRTVANLFPNQTKEEILDEMDESNREVLKDEVFLVDQSNEYLKNQNAELRELDEKRKWLEGYIGKLKEKILIPEPHFFDETPLIAVQKQLEELNTRKPMLKDLQEVLKIRNEVQQKLAQVEHQTFAQQTQKAELLKEKALLQQKLETEMDKQYTPFNPAHIEAKLTVLRSDYKHNMEAERLLEAETNKLSARHVHVKEGEQCPYCKQTISEASLKVLATELALEVAKETEVLEIKRKEKQKTLAELEKEGKNLLLEIKKSKEEDEKKRKQFEAAKTKTIQDINNRLKVISTEVNSITSAEKAFVANKNSQMKSLQAEIHNLGVDKFEAENLRIEREFCAQISTEKAKLQSELKTLQKQKEEVLAHEAERKVLQKSADQRLKDLQVREKEMREYVEMEEIIRNKIYCIKDFNKKKIEMLTQKIKKYLKNVEIRLQRTVESTGELKDCFEIYYEGKELKICSNSEIIRAGLEISNMVSSLSNVKFPIFVDNGESITSYEDPGFQTIEVRVVKDKPLTMIKGGKEIVIHSIKTPVKSSKPKKIVHSRNGSSPGSSVAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELD8</accession>
    <name>E3ELD8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28330</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386384.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0581"/>
    <dbReference type="EnsemblBacteria" id="ADO59970">
        <property type="protein sequence ID" value="ADO59970"/>
        <property type="gene ID" value="PPSC2_28330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6009"/>
    <dbReference type="HOGENOM" id="CLU_2194370_0_0_9"/>
    <dbReference type="OrthoDB" id="588166at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="13242" checksum="0B880738A7243BD6" modified="2011-01-11" version="1">MTEPSVNIRHFMIVSLGGNSFLHTYIDEIYNQRKWEYYECYRNSEMHNDALLPRHVTKNEEKMKQVAGTVEWCYLNNDFDLIYRLIKRGYKFVYTDRFDDPRIPHFKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBS6</accession>
    <name>A0A0D5ZBS6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvaP1</name>
        <name evidence="2" type="ORF">PPSC2_10640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599691.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23035"/>
    <dbReference type="EnsemblBacteria" id="AKA44230">
        <property type="protein sequence ID" value="AKA44230"/>
        <property type="gene ID" value="PPSC2_10640"/>
    </dbReference>
    <dbReference type="GeneID" id="66577810"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2248"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_3_9"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12374" checksum="84D31F1E40FA36E7" modified="2015-05-27" version="1">MSDDRQPKLLCGKVEQSFQIISKKWTALIIHTLMEHPKRFSEIQVSIPDLSKRMLNERIKELELSGLILRNVITERPVRTEYSLTRKGKELGDALNGVESWAERWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCE2</accession>
    <name>A0A0D5ZCE2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Polymyxin synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pmxE</name>
        <name evidence="10" type="ORF">PPSC2_22060</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="STRING" id="886882.PPSC2_c4709"/>
    <dbReference type="EnsemblBacteria" id="AKA44313">
        <property type="protein sequence ID" value="AKA44313"/>
        <property type="gene ID" value="PPSC2_22060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4695"/>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_222916_0_0_9"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
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        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="5"/>
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        <property type="match status" value="7"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="AA_adenyl_domain"/>
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        <property type="entry name" value="ACP-like_sf"/>
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        <property type="entry name" value="AMP-bd_C"/>
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    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
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    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
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    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
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    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010060">
        <property type="entry name" value="NRPS_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01720">
        <property type="entry name" value="NRPS-para261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0045">Antibiotic biosynthesis</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="980"/>
            <end position="1055"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="2029"/>
            <end position="2104"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="3143"/>
            <end position="3217"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="4701"/>
            <end position="4777"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="9">
        <location>
            <begin position="5783"/>
            <end position="5858"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="3587"/>
            <end position="3606"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="1015"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="2064"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="3178"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="4737"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="5818"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="AKA44313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="6312" mass="710176" checksum="183AF4D884CAF89E" modified="2015-05-27" version="1">[encoded data, 6312 characters]</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCF2</accession>
    <name>A0A0D5ZCF2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">30S ribosomal protein S14 type Z</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rpsN3</name>
        <name evidence="7" type="synonym">rpsN</name>
        <name evidence="7" type="synonym">rpsZ</name>
        <name evidence="8" type="ORF">PPSC2_22370</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.</text>
    </comment>
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        <property type="protein sequence ID" value="AKA44318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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        <property type="gene ID" value="PPSC2_22370"/>
    </dbReference>
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    <dbReference type="KEGG" id="ppm:PPSC2_22370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4743"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="F:structural constituent of ribosome"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR018271">
        <property type="entry name" value="Ribosomal_S14_CS"/>
    </dbReference>
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        <property type="entry name" value="Ribosomal_S14_Z"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19836">
        <property type="entry name" value="PTHR19836"/>
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    </dbReference>
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        <property type="entry name" value="Ribosomal_S14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00527">
        <property type="entry name" value="RIBOSOMAL_S14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="7">
        <location>
            <position position="24"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AKA44318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="7174" checksum="5488B15D6D78B7B8" modified="2015-05-27" version="1">MAKTSMKVKQQRAPKFKVRAYTRCERCGRPHSVLQKFKICRICFRELAYKGQIPGVKKASW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCM1</accession>
    <name>A0A0D5ZCM1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886199.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0303"/>
    <dbReference type="EnsemblBacteria" id="AKA44358">
        <property type="protein sequence ID" value="AKA44358"/>
        <property type="gene ID" value="PPSC2_26660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5631"/>
    <dbReference type="HOGENOM" id="CLU_2357109_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="11529" checksum="F9D472ABD443E6FC" modified="2015-05-27" version="1">MDYTYNQMEREVDLLFERHGSTRIQRDAFYFGYKAGQEIRNKQQQKPSLTDFLGEIKPHNDILLQNKLNRFFAESGFTTKEKLHFRKGVEFGKMEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E471</accession>
    <name>E3E471_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lytTr</name>
        <name evidence="6" type="ORF">PPSC2_12400</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56611.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025677748.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00090"/>
    <dbReference type="EnsemblBacteria" id="ADO56611">
        <property type="protein sequence ID" value="ADO56611"/>
        <property type="gene ID" value="PPSC2_12400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2630"/>
    <dbReference type="eggNOG" id="COG3279">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_14_2_9"/>
    <dbReference type="OrthoDB" id="1958442at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007492">
        <property type="entry name" value="LytTR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04397">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00850">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50930">
        <property type="entry name" value="HTH_LYTTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="3"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="HTH LytTR-type" evidence="5">
        <location>
            <begin position="144"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="3">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56611.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="28827" checksum="5693006D4D85AC4C" modified="2015-05-27" version="2">MYRVAICDDEYKQRELVKNMLIALSIKTNIEFKIELFNSGEQLVAHYLNHELPFHILILDIEMNGMNGIQTAQKIRSLRHLDEQIIFLTSYPEYMLESFDVVTFQYLIKPIASHIFEEKMIKLCQYFQSLDKKFVIIKSAYEEVLLKYDDIISIEVAKSLTIKNKLHFVTSTQTYDSKGILSDYALALKEYNFLQIHRSIIINLIHVKKFAGGDVLMSNDVKLPIGRSKIKEVKDLYTKFMIMKMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E491</accession>
    <name>E3E491_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Glutamate racemase</fullName>
            <ecNumber evidence="2 7">5.1.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">murI</name>
        <name evidence="8" type="synonym">murI5</name>
        <name evidence="8" type="ORF">PPSC2_12505</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Provides the (R)-glutamate required for cell wall biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>L-glutamate = D-glutamate</text>
            <dbReference type="Rhea" id="RHEA:12813"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:29986"/>
            <dbReference type="EC" id="5.1.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the aspartate/glutamate racemases family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.3" evidence="2 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371235.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2662"/>
    <dbReference type="EnsemblBacteria" id="ADO56631">
        <property type="protein sequence ID" value="ADO56631"/>
        <property type="gene ID" value="PPSC2_12505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2651"/>
    <dbReference type="eggNOG" id="COG0796">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052344_1_0_9"/>
    <dbReference type="OMA" id="KAVMIAC"/>
    <dbReference type="OrthoDB" id="1718671at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008881">
        <property type="term" value="F:glutamate racemase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00258">
        <property type="entry name" value="Glu_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001920">
        <property type="entry name" value="Asp/Glu_race"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018187">
        <property type="entry name" value="Asp/Glu_racemase_AS_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004391">
        <property type="entry name" value="Glu_race"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53681">
        <property type="entry name" value="SSF53681"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00067">
        <property type="entry name" value="glut_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00923">
        <property type="entry name" value="ASP_GLU_RACEMASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="7"/>
            <end position="8"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="39"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="71"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="183"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="29719" checksum="B394B0B663482E3E" modified="2011-01-11" version="1">MQIGFFDSGIGGITVLHDTLKVLPNEDYMYYADTLNVPYGHKTKDEVKKYVLNAIEFISQQKVKAIVIACNTATSAAIEEIRGKYSIPIIGMEPAVKPAVKSKKNIDKRVLVTATALTLREERLQNLITKLDNEHVVDLLPLPKLVQFAESFEFNEQIVLPYLQEQLSIYDLSKYETIVLGCTHFSYYKDIFRKLFSSDVNIIDGNNGTAKNLKKVLEEMNSLDEGNGNISFYCSGVKVEDKAKLKEFNKLFKRLDAINEYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4C9</accession>
    <name>E3E4C9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371273.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56669">
        <property type="protein sequence ID" value="ADO56669"/>
        <property type="gene ID" value="PPSC2_12665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2691"/>
    <dbReference type="HOGENOM" id="CLU_1026162_0_0_9"/>
    <dbReference type="OrthoDB" id="1838755at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="249"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="31955" checksum="0AC607CEEA61F539" modified="2011-01-11" version="1">MREEQEIFADEGYNRSYAIATGLPILNIRGSIPRESNGQLPFPWVTTGIRIDKEQMLETVMKQKTLEYLFKMQFSKEEMTDRNLVVGCYEYRNPNDKEQITLYALVSLKEFLARYGDERALEIMMRVGCAYEKIMEECDEAIEEHYAVLRRALHLKNLRDKYDVVYEWVEEEGQKTYIIRYTKSSYTKIKAESFVELTKLYDEQRKKDAKKTFSTLEPLEAFMQDKKTARLQSGFSTFHRTKIRGISEDSRQVASESADPCARYGRINRER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4H7</accession>
    <name>E3E4H7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pknB3</name>
        <name evidence="8" type="ORF">PPSC2_13655</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371479.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01345"/>
    <dbReference type="EnsemblBacteria" id="ADO56876">
        <property type="protein sequence ID" value="ADO56876"/>
        <property type="gene ID" value="PPSC2_13655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2905"/>
    <dbReference type="eggNOG" id="COG0515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038253_0_0_9"/>
    <dbReference type="OMA" id="ITLEAYM"/>
    <dbReference type="OrthoDB" id="1377603at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="18"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="497" mass="56210" checksum="BFCCCCB9E3121205" modified="2011-01-11" version="1">MMNQPSQLEFGSIVGERYRIIRTLGSGGMSRVFMAEDLKLPGKHWAVKESIADPKIMKIVRTEAEMLISLSHPRLPRIVDFFEYPPSGAVYLVMDYIEGITLEAYMRGYQGYIPQEQIIPLALQVLDVLDYLHTRQLPVIYRDLKPANIMLTPEMEFKLIDFGIARSYKSELDQDTIKLGTVGFAAPEQYGTGQTDARSDLYSLGALLLYLCTGGKYSEWTAGVEGYIRGELPRHLIPIIRKLLRHHPEERFQSAEEVIEELRRSADFQSAQPGKSMSNASMDYAGTRVVAVLGVSSGSGATHTAIAVSHYLARRTHSVALVELHSTAKAFARLQEVVEGIPVGQASSSRRFEVDGVHYWRQTSRADVISLLGGSYRFIVLDLGNGQDNERLEEFLRADYPLVVGSGAEWRVQDITGLARSLQRHPQHKWNYCLPLASSEAVRRLRKELEHDKVFALPLHSDPFEQDDEMDQVLDELFRGVITDTRKKRFGFLKRQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4I0</accession>
    <name>E3E4I0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Thiol-disulfide isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">trxA5</name>
        <name evidence="1" type="ORF">PPSC2_13670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371482.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01360"/>
    <dbReference type="EnsemblBacteria" id="ADO56879">
        <property type="protein sequence ID" value="ADO56879"/>
        <property type="gene ID" value="PPSC2_13670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2908"/>
    <dbReference type="eggNOG" id="COG0526">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090389_17_1_9"/>
    <dbReference type="OMA" id="PMCGTCA"/>
    <dbReference type="OrthoDB" id="1630944at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="104" mass="11721" checksum="649AB5A7B76D264A" modified="2011-01-11" version="1">MKEIGQKEARRAIWEGCKLALFVYTPMCGTCAAARRMLEVAEHLLPEGAVVQSNINYIPELVQECRISSVPALLIYNGENKNPEIIYKMESVGHLLSRIRSVME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4M7</accession>
    <name>E3E4M7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371527.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56926">
        <property type="protein sequence ID" value="ADO56926"/>
        <property type="gene ID" value="PPSC2_13875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2963"/>
    <dbReference type="eggNOG" id="ENOG5030K43">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111912_0_0_9"/>
    <dbReference type="OMA" id="RENYLLY"/>
    <dbReference type="OrthoDB" id="1578201at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="25035" checksum="2A5A60FD31D4E0E8" modified="2011-01-11" version="1">MPYPMVHFAIALELCSRTPSSSFLIGSIAPDAVHVRGDVTRSEKGITHFVCEDRFPSSEVLKERCQYYLNLNVETNWTDYILGYFAHIYADIRWTETVYSNFEREYQGEKDEIRKIYNMEANQVEFNLIKREEWAEDVLNKLYVGNAYSIEPLLTQIEVNQYRDIKLQWLRNKNNEPQITPIYLKVDVVKSFVTKTSHELNDLYKEWGIESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4R2</accession>
    <name>E3E4R2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">3'-5' exonuclease DinG</fullName>
            <ecNumber evidence="4 5">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dinG3</name>
        <name evidence="4 5" type="synonym">dinG</name>
        <name evidence="8" type="ORF">PPSC2_14420</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">3'-5' exonuclease.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 5">Belongs to the helicase family. DinG subfamily. Type 2 sub-subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="4 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371639.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02070"/>
    <dbReference type="EnsemblBacteria" id="ADO57040">
        <property type="protein sequence ID" value="ADO57040"/>
        <property type="gene ID" value="PPSC2_14420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3078"/>
    <dbReference type="eggNOG" id="COG1199">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2176">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012117_1_0_9"/>
    <dbReference type="OMA" id="VVTNHAM"/>
    <dbReference type="OrthoDB" id="679382at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016818">
        <property type="term" value="F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02206">
        <property type="entry name" value="DinG_exonucl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006555">
        <property type="entry name" value="ATP-dep_Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006310">
        <property type="entry name" value="DinG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045028">
        <property type="entry name" value="DinG/Rad3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006054">
        <property type="entry name" value="DnaQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014013">
        <property type="entry name" value="Helic_SF1/SF2_ATP-bd_DinG/Rad3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472">
        <property type="entry name" value="PTHR11472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13307">
        <property type="entry name" value="Helicase_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00491">
        <property type="entry name" value="HELICc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01407">
        <property type="entry name" value="dinG_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00573">
        <property type="entry name" value="dnaq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51193">
        <property type="entry name" value="HELICASE_ATP_BIND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="8" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="1 4 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="253"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="275"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="DEAH box" evidence="4">
        <location>
            <begin position="469"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="288"/>
            <end position="295"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="960" mass="108485" checksum="BBCA580C908F25B2" modified="2011-01-11" version="1">MKFAVLDFETTGTQSADDIIQVGLAIIDHDNSISRVYGSYVNPGRSIPPFITGLTGITDDDVKDAPALEEMMMELVPMLDDVVLVGHNVAFDFNFLQSALDRCGYLPFSGRILDTMDFLKIMFPSLSSYQLGFVSSEFGLAHDRPHQADSDALATAEVFLKCLGELQALPLITIQRLSDLFAEEDSDLGWFLDGIREEKELDPIQDLEKHQFFRQLALKVEDWTELATPRREDDPNPLSGVSFEEYMDDVRDNLRSSLSQYEEREAQTQMIEGVNQALSQDKHLLIEAGTGTGKSLGYLLPSLYHSVKYGQRVTVSTHTINLQEQLRERDIPMLTKVIPFPFRAAIFKGRGHYLCLRKFEHKINRRDFATPKEDLITAAQMIVWLTLTETGDDEELNLSNRGGDFWETVASDSESCLGRSCPWFRKCYYHRARHEAGTADVVITNHSKLFTDVKASHQLLPSYEHLVIDEAHHLEEVAGKHLGMHMKYFTLVHTLTRLFKDSKNGQLPSLRQQLAKSGHEKSTEWASTIDQLYPLVLEVKETWDLLSDKLFGMLPERSDATPGETGQFSSRLKPSAKPAKWDQAAALENQLYVTLSEILRKGDKLMLDVKEEHDDYAADSLITDITGLLKDLAGIRENLRFFIRLDDETTVYWLEASGQFRSKSLQFYAVPVDVSRQLKEMFFDKKRSIILTSATLSVDKSFQYMTDQLGLQEAADQGRLMTSQLPSPFNYRDQVLLVIPRDFPSVKGSVGDAHFVEMLVSSLGATAQATRGRMLVLFTSYRMLRQVYEPLKEALASSDITVLGQGVDSGSRSKLTRRFQEAKASVLLGTSSFWEGVDIPGKALTCLAIVRLPFQPPNHPLLEAKSELLQQQKKNPFMKLSVPQAVIRFKQGFGRLVRTASDHGVVIVYDTRVIESYYGKHFLYSLPGPKMEHMPSEQMVPRIAEWLQSAPETEAQRTDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4R3</accession>
    <name>E3E4R3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371640.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02075"/>
    <dbReference type="EnsemblBacteria" id="ADO57041">
        <property type="protein sequence ID" value="ADO57041"/>
        <property type="gene ID" value="PPSC2_14425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3079"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1228903_0_0_9"/>
    <dbReference type="OMA" id="IYNALGC"/>
    <dbReference type="OrthoDB" id="1283511at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13174">
        <property type="entry name" value="TPR_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="79"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="113"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="150"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="24255" checksum="DF9E6793CF7E3754" modified="2011-01-11" version="1">MFQHVFAEMNSMLDDIVKHYPSAQGPRRQELLQHWSLLRRMSDGIMDEWLAFEEKMVCLRAAGFSAEADMSDAELPEKELPAFNRGQGYYRLLMYPEAIQQFEQVLEHFPDSWQSRIYMGMAHFQLDDPAEAISQFQKVLHLTEQSGLKAVIYNALGCLMAKQADVKEAQKYFALAHQFDPTLPEPLHNMQACLSGAEKLRYDSSLLTWM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z7</accession>
    <name>E3E4Z7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">YngK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yngK</name>
        <name evidence="6" type="ORF">PPSC2_15195</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371796.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02815"/>
    <dbReference type="EnsemblBacteria" id="ADO57205">
        <property type="protein sequence ID" value="ADO57205"/>
        <property type="gene ID" value="PPSC2_15195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3244"/>
    <dbReference type="eggNOG" id="COG1649">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_471615_0_0_9"/>
    <dbReference type="OMA" id="YGPWSEY"/>
    <dbReference type="OrthoDB" id="1573900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003790">
        <property type="entry name" value="GHL10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02638">
        <property type="entry name" value="GHL10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168166" evidence="3">
        <location>
            <begin position="28"/>
            <end position="581"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="5">
        <location>
            <begin position="55"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="GHL10" evidence="4">
        <location>
            <begin position="221"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="147"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="581" mass="63195" checksum="EC630ED53ED39D46" modified="2011-01-11" version="1">MNRKKIGLMVSGLLLAVQTAIVPGVQAAPTGEIEIILDGQSLQSDASPYIVQGANVTMVPLRVISEGLGAQVNWSASSGTVTITAQNKNISMDNGAQSATVNGKSVRLDASARMSSGRVMVPLRFVGEELGLKVDWQASERVITLSSGKEGASTSGNTSAVGSSSSSSDTSASGNQESVSTDQGVKDDGQDVANSSSTSTNEDSSGSSQGNVAQVKATTSMRGAWISTINGDWPSSAARSSSEKQKQEFTKMLDDLQGMGINAVFVQVRASGDALYRSDLVPWSKYLTNTQGKNPGYDPLKFMISESHKRGMEFHAWFNPFRANSTGTTSGLAANHVANQHPDWIVKNGSQLYINPGIPAARQHVIAAIMEVVNGYDIDGVHLDDYFYPYSGTFDDDATFKAYNANKISNKGDWRRDNVNSFVRDLGKSIHASKSKVQFGISPFGVWRNKSQDITGSDTKAGVTAYDTTFADVRTWINKEWIDYVAPQIYWSIGFPAAGYDKLVAWWSNEVKNSDVKLYIGHSPYKIGTPEKGWQSAQELIKQLELNENYKQVKGDIYFSAQHLRKNPYGLIQLLQNYYKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E545</accession>
    <name>E3E545_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine protein phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">prpC</name>
        <name evidence="2" type="ORF">PPSC2_15420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371843.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03070"/>
    <dbReference type="EnsemblBacteria" id="ADO57253">
        <property type="protein sequence ID" value="ADO57253"/>
        <property type="gene ID" value="PPSC2_15420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3295"/>
    <dbReference type="eggNOG" id="COG0631">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034545_4_1_9"/>
    <dbReference type="OMA" id="EDHTWVA"/>
    <dbReference type="OrthoDB" id="1835483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006470">
        <property type="term" value="P:protein dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832">
        <property type="entry name" value="PTHR13832"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="258" mass="27712" checksum="FC6EC2FFA9B89B64" modified="2011-01-11" version="1">MIKTVHVSHVGRVRSVNEDSAWIRHLEQGYILGIVADGMGGHLAGDTASRLAVETLAADLATLESGLSAHSLTAALSDAILHANEVIFQTAARDDQYHNMGTTVVAVLLNDASGIIGHIGDSRAYVISKGTVRQLTEDHTLVNELFKNGQISKEERENHPRRNVLTRALGTDSEVKVDIDTITLEKGDVLLLCSDGLSNLVTEEQIRKVVGAAENPLEERADRLLHLALLAGGDDNITVALFELPDNTVSLSEKGCEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E546</accession>
    <name>E3E546_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Probable dual-specificity RNA methyltransferase RlmN</fullName>
            <ecNumber evidence="11">2.1.1.192</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">23S rRNA (adenine(2503)-C(2))-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">23S rRNA m2A2503 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Ribosomal RNA large subunit methyltransferase N</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">tRNA (adenine(37)-C(2))-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">tRNA m2A37 methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">rlmN</name>
        <name evidence="13" type="synonym">rlmN1</name>
        <name evidence="13" type="ORF">PPSC2_15425</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>adenosine(2503) in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine(2503) in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42916"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10152"/>
            <dbReference type="Rhea" id="RHEA-COMP:10282"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74497"/>
            <dbReference type="EC" id="2.1.1.192"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>adenosine(37) in tRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine(37) in tRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:43332"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10485"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74497"/>
            <dbReference type="EC" id="2.1.1.192"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="11">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="11">Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the radical SAM superfamily. RlmN family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.192" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57254.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014600031.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03075"/>
    <dbReference type="EnsemblBacteria" id="ADO57254">
        <property type="protein sequence ID" value="ADO57254"/>
        <property type="gene ID" value="PPSC2_15425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3296"/>
    <dbReference type="eggNOG" id="COG0820">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029101_0_1_9"/>
    <dbReference type="OrthoDB" id="1111428at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070040">
        <property type="term" value="F:rRNA (adenine-C2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002935">
        <property type="term" value="F:tRNA (adenine-C2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01849">
        <property type="entry name" value="RNA_methyltr_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040072">
        <property type="entry name" value="Methyltransferase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027492">
        <property type="entry name" value="RNA_MTrfase_RlmN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004383">
        <property type="entry name" value="rRNA_lsu_MTrfase_RlmN/Cfr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30544">
        <property type="entry name" value="PTHR30544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006004">
        <property type="entry name" value="CHP00048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00275">
        <property type="entry name" value="adenosine_C2_methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00048">
        <property type="entry name" value="rRNA_mod_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 11" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9 11" id="KW-0408">Iron</keyword>
    <keyword evidence="10 11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 11 13" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="7 11" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 11 13" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Radical SAM core" evidence="12">
        <location>
            <begin position="97"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="11">
        <location>
            <begin position="161"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="11">
        <location>
            <begin position="216"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="11">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <feature type="active site" description="S-methylcysteine intermediate" evidence="11">
        <location>
            <position position="335"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57254.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="346" mass="39242" checksum="5D0BD84AC62B51DF" modified="2015-05-27" version="2">MKPFIYDLTLEELQDWAKNNGEPAFRGGQIFDWLYVKRINNFSEMTNLSKALREKLEEQFSFVTLHEITKLESKDGTVKFLFGLHDDHAIETVIMRHNYGNSICVTTQVGCRIGCTFCASTLGGLKRNLTAGEITAQVVQAQKILDKTNERVSSIVIMGSGEPFENYEATMTFLRTMIHEKGLNIGQRHITVSTSGIVPNIYKFADEDTQINLAISIHAPNDALRSKLMPVNRRYPFKDVMDSLRYYLAKTGRRISFEYALIGGVNDQAEHAEELADVLKDMLCHVNLIPVNHVPERKYVRTSRSDIFNFQRILAEKGVNVTIRREQGHDIAAACGQLRAKHMELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5H5</accession>
    <name>E3E5H5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_17480</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372275.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04820"/>
    <dbReference type="EnsemblBacteria" id="ADO57694">
        <property type="protein sequence ID" value="ADO57694"/>
        <property type="gene ID" value="PPSC2_17480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3734"/>
    <dbReference type="eggNOG" id="ENOG5033VJ6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_080409_0_0_9"/>
    <dbReference type="OMA" id="FPDQNRV"/>
    <dbReference type="OrthoDB" id="1267650at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168629" evidence="2">
        <location>
            <begin position="33"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="301" mass="32344" checksum="D8E547EC2A501453" modified="2011-01-11" version="1">MKKHNTFSIILLTVVAVLALSACGTKPQTNNNAPQGADQPQTQQPQATPEPVAEPQVKKGTGVYNGAADPHTVEIETNGEAQSFQLGEGLDTVIAGLKEGDPVAFEYTEKAVEDDATAKQLTLTKIQKTEASTDSSQNGSSGQQVGGNRAKTQTFELNLEGKKEKQTATLAKGEGYSLYVFDPMSLFPDQNRVALAVDDNYYAEITKLPSNFNLDELQKDGEKDLASIGKVQKLDKAAVPQALTSSRLFLQANGSKITQQYIVVENTTGAFSVKVNIPHGEPAEGFESFIYTSLESLQANK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5H7</accession>
    <name>E3E5H7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yetK</name>
        <name evidence="4" type="ORF">PPSC2_17485</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3741"/>
    <dbReference type="EnsemblBacteria" id="ADO57696">
        <property type="protein sequence ID" value="ADO57696"/>
        <property type="gene ID" value="PPSC2_17485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3736"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033863_0_2_9"/>
    <dbReference type="OMA" id="MCIGWGD"/>
    <dbReference type="OrthoDB" id="1515911at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="70"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="182"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="217"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="244"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="270"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="12"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="153"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="35256" checksum="A55502CAD2A08073" modified="2011-01-11" version="1">MNQAHKPSFSFELLYIIGIIAISFSSIFVRWSEAEVSVIAMYRLYLTNLLMLPLVWKYRTELFSLTRKQWMMILWSGIALGLHFLLWMGSLRLTTVASSTVIMTLEPILVMLGSFLFFRTGTNRAMLFGMGMAFVGSLAIGAGDFHVSGQALLGDALSFLGMVAVSIHMLMGKHLREHLSAFVYNFWVFIIAATSLALYNVVNAIPFTGYAPREWGLFLLLAIVPTLFGHYLFNWLLKYINATAVSMAVLGEPVISSLLAWVLLGERLSTLQFGAGFFILFGVWVFIRYGTDFKKQVVHESEIPDNERSLKASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5H9</accession>
    <name>E3E5H9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aminoglycoside phosphotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hsK1</name>
        <name evidence="2" type="ORF">PPSC2_17495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57698.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04835"/>
    <dbReference type="EnsemblBacteria" id="ADO57698">
        <property type="protein sequence ID" value="ADO57698"/>
        <property type="gene ID" value="PPSC2_17495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3738"/>
    <dbReference type="eggNOG" id="COG2334">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044821_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="49"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57698.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="341" mass="39818" checksum="384789A183EAB886" modified="2015-05-27" version="2">MLKGDIHLEIFPLEISVLSADALREYISREYFSYALLKCRLFYRGIHDIYRVNADEKEYFFKVYRKGIRSMEEIQTEVDLLNHLKLSDIEITTPVTRHDGKFISQFNTANGIRYGVLYTSVGKHEFNQIEETAELNERLGSYIATIHNAWDKCELGKKRWNLDADSFIDNSMDAIRQFSTIHDFDLHFLEEVAKNVSDKLECLTVERPQYGICHGDIYSGNIRVDANSNPILFDFDFCGNGWRAYDISLYAFPFGMGCDETKLQKREERKYQFLNGYNKVRAMSQSEVDSIALFIPFRRIFNIGTLYISYLPNTWGDSAVIKNVDEDIKLLQKWLELNPIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N8</accession>
    <name>E3E5N8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">sgaT</name>
        <name evidence="8" type="ORF">PPSC2_18490</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372494.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05705"/>
    <dbReference type="EnsemblBacteria" id="ADO57915">
        <property type="protein sequence ID" value="ADO57915"/>
        <property type="gene ID" value="PPSC2_18490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3963"/>
    <dbReference type="eggNOG" id="COG3037">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031784_0_1_9"/>
    <dbReference type="OMA" id="HAFYMAC"/>
    <dbReference type="OrthoDB" id="361453at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004703">
        <property type="entry name" value="PTS_sugar-sp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03611">
        <property type="entry name" value="EIIC-GAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="89"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="115"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="140"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="220"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="312"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="337"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="362"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="416" mass="44538" checksum="D9EEC76A68930D8C" modified="2011-01-11" version="1">MEMFMSIIREPSIIIAIVTLLGLIFQRKKVSEIITGTTLSFMGFTMIKVGGGILGGVLTNFSQIFSFAFNLKGVVPSNEAIMALTIDQIGADAALILLFSMILNIVLARLTKFKYIYLSLHLILFMSFAATAVMKGLGLSSLTTIIVGSLVIGSYMAVFPYLLRNASKNIIKSDEYTIAHASMTSYILGTYLGKVLGNREHDTENVKINDRISFLRDPNVATTLTMLVLLLVSGLVAGSEYVSKLSNGKEYLVFILEQSATFAAGLYIAKAGVKLFTTEIVPAFKGFSQVFAPGAVPGVDVLVLFDKSPNSALVGFLVSFFTGVACVFVFPLIGLPVIVPGIMACFLAGGAAAIFGNSSGGFRGAVISSCLNGFLLCLLPALTLPLFSFLGADGVTFADPDFTTLSGLLWLIFRWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W0</accession>
    <name>E3E5W0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dltE3</name>
        <name evidence="2" type="ORF">PPSC2_19785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372751.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07005"/>
    <dbReference type="EnsemblBacteria" id="ADO58179">
        <property type="protein sequence ID" value="ADO58179"/>
        <property type="gene ID" value="PPSC2_19785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4217"/>
    <dbReference type="eggNOG" id="COG0300">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_2_1_9"/>
    <dbReference type="OMA" id="FQPGPWM"/>
    <dbReference type="OrthoDB" id="1186478at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="261" mass="28634" checksum="3E07A9D77C44F8E5" modified="2011-01-11" version="1">MFMYANKTALITGASSGIGEAFAYSLAAKKCNLILVARNETKLKALAKELSAKYNVKATVIALDLSSPGAPQTLHQEVQYQQLKVDLLINNAGFATYGYFEQVSGERQHEEVMLNVAALVDITHAFMPDLLRNRDGGLINVSSTAAFQPDPYMAVYGATKAFVLSFSEALWAENRKRGLKVLALCPGATETSFFDVVGSSEASVGSRETPQTVVHNALKAFEKGRSHMISGRQNYWVAQVSRFFSRQSTLNIVERTLRPQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E696</accession>
    <name>E3E696_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-ketoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371385.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00870"/>
    <dbReference type="EnsemblBacteria" id="ADO56781">
        <property type="protein sequence ID" value="ADO56781"/>
        <property type="gene ID" value="PPSC2_13195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2809"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_0_9"/>
    <dbReference type="OMA" id="RIWDSKV"/>
    <dbReference type="OrthoDB" id="1356861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="26866" checksum="25C06A5B2ABEAE98" modified="2011-01-11" version="1">MSFEGQVVIVTGAAHGIGKEVAFAYAAQGARVVFADCNEEEGAAAAAAVRNEGHQAIFIPCDVRKEEDIVALIRATEEEYGTIHTLINNAGVSRWKSPYELTVAEWDDILNTNVRSCFIATREAAKVMKRNAEGGSVVNMTSTRAFMSEPDTEAYAASKGAIAALTHAMAISLGKDRIQVNCISPGWIETGDYEQLRAEDHQQHPAGRVGTPKDIARACLYLTQPGNDFVTGTNLVVDGGMTRKMVYEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6I6</accession>
    <name>E3E6I6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_20095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372818.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4296"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58246">
        <property type="protein sequence ID" value="ADO58246"/>
        <property type="gene ID" value="PPSC2_20095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4283"/>
    <dbReference type="eggNOG" id="COG1215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025996_0_4_9"/>
    <dbReference type="OMA" id="ICLCYNH"/>
    <dbReference type="OrthoDB" id="865276at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="8"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="210"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="238" mass="27835" checksum="C211149D9240D598" modified="2011-01-11" version="1">MESLPKVSVIIPFFNCPYVDQAVASVLNQTYPNIEIIVVDDGSTMHQERLIPYMDRIYYLGKMNGGTATALNYGIQMSTGKYTVWLSSDDMFYSTKIERQVNFMEQHQAEVSFTDYHVINKANEVICRNATAKFTTVRSFIEAFSSYCPLNGCTVMMKKDYVRNIGYFNEKLLYTHDYDFWIRVVLNHTEFHYLDEPLTAYRRHEQMGTVQHYQAIVQELETIRQTYQNQLQVVLNTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6J8</accession>
    <name>E3E6J8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spore maturation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cgeB2</name>
        <name evidence="2" type="ORF">PPSC2_20145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372830.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07395"/>
    <dbReference type="EnsemblBacteria" id="ADO58258">
        <property type="protein sequence ID" value="ADO58258"/>
        <property type="gene ID" value="PPSC2_20145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4293"/>
    <dbReference type="eggNOG" id="COG4641">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033615_0_0_9"/>
    <dbReference type="OMA" id="YPRRVER"/>
    <dbReference type="OrthoDB" id="1121024at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024542">
        <property type="entry name" value="DUF3880"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12996">
        <property type="entry name" value="DUF3880"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3880" evidence="1">
        <location>
            <begin position="123"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="363" mass="42065" checksum="EDB354668C2D89F6" modified="2011-01-11" version="1">MKDVNDQRSGNEREAYRCGYREGRRMGGCTAALSQVVAIQPAVRQLKVLYIPQGFVAIDTGVQEALSQICSSCAIGTPATMLADAKAHRPDLVLVMNGLHVFPDDHLEQVQQIRAMGIRTAIWFVDDPYFTEDTALICQSYDVVFTHENSCLPFYRDQGVTRVHYMPLAVSARIFYPRRVEREHQHDICFIGNAFWNRVKLFDYLAPFLADKRVLIVGGHWDRLTRRDVLERFIRPGFMEPEETARYYNGSKIVINMHRPTDPGLDNRNTHQLSAESINPRTYEISACGTLQMTDVRKDLSRYYQPGYDIETFSGAEELKVKLDYYLKHDWERERIAWRALHTTMQKHRYSNRMEELLDKAMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6M9</accession>
    <name>E3E6M9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">GTP pyrophosphokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ywaC</name>
        <name evidence="4" type="ORF">PPSC2_20280</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; ppGpp biosynthesis; ppGpp from GTP: step 1/2.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372861.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07535"/>
    <dbReference type="EnsemblBacteria" id="ADO58289">
        <property type="protein sequence ID" value="ADO58289"/>
        <property type="gene ID" value="PPSC2_20280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4323"/>
    <dbReference type="eggNOG" id="COG2357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077095_1_1_9"/>
    <dbReference type="OMA" id="GLRITCS"/>
    <dbReference type="OrthoDB" id="1938730at2"/>
    <dbReference type="UniPathway" id="UPA00908">
        <property type="reaction ID" value="UER00884"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015970">
        <property type="term" value="P:guanosine tetraphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05399">
        <property type="entry name" value="NT_Rel-Spo_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007685">
        <property type="entry name" value="RelA_SpoT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04607">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00954">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RelA_SpoT" evidence="3">
        <location>
            <begin position="56"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="187"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="28754" checksum="EAEF08C0D0A9FB7E" modified="2011-01-11" version="1">MQLEDPMDKLKKLKHDITRFMLIYKFALDEMETKIEILKQEFQALHDYSPIEHTKSRLKSPESIMNKMLRKNSELSLDAIKDSIKDIAGLRITCSFISDIYDVSNMLQRQSDLKVLEIKDYIKNPKPNGYQSLHLLVQVPVFMSDCEELVCVEVQIRTIAMDFWASLEHKIFYKYNQSVPESLTRELKNAADSANALDLQMERLHREIKEIKDARGEEDSMEELRKIMINNQQITVPANFLKLLGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E786</accession>
    <name>E3E786_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yttB</name>
        <name evidence="9" type="ORF">PPSC2_23470</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58941.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324831.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10960"/>
    <dbReference type="EnsemblBacteria" id="ADO58941">
        <property type="protein sequence ID" value="ADO58941"/>
        <property type="gene ID" value="PPSC2_23470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4968"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_60_4_9"/>
    <dbReference type="OrthoDB" id="1452500at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="100"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="217"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="255"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="286"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="309"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="342"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="373"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="10"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58941.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="409" mass="44678" checksum="0137F520EA0B5CE8" modified="2015-05-27" version="2">MKWLESYPKEVKVFLIASLINSAGSSLMWPLVSMYVFDELNRSMGDAGIAILVQSLGGIFGQVLGGALYHRIGAKKLIVGSLAMNALGLLSLPFTSGHWVAFVIMMGFIGFFNVVSVPAIQAFVGFRFADRRGELFNIIYVANNIGVALGTGLSGVLADLSYQLSFVMNGVTSAVFAGFFWSYLSRVDREEGEVQLSKSVMKREEIPARLLFRDTRLYLFVGLGSLFLWFGNSIWNTGVSPYIIEQGLPKTMYGLLWTLNGVLIFAAQPIIFWIKRLYAHHASAQMTWAGGFYLAAYIVILGTQNYTGMIFAMVLATLGEMLIAPAVPAFLSDHGGRGAPFYIGLVGGIGAAGRVMGPYIMGKLYDGGGLPPTLWLALGVAVLSILFFILHSWLNRFRHDLDNLDTTPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E797</accession>
    <name>E3E797_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cation diffusion facilitator family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ydfM</name>
        <name evidence="8" type="ORF">PPSC2_23515</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373488.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11015"/>
    <dbReference type="EnsemblBacteria" id="ADO58952">
        <property type="protein sequence ID" value="ADO58952"/>
        <property type="gene ID" value="PPSC2_23515"/>
    </dbReference>
    <dbReference type="GeneID" id="66575370"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4979"/>
    <dbReference type="eggNOG" id="COG0053">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013430_3_6_9"/>
    <dbReference type="OMA" id="YGHQRIE"/>
    <dbReference type="OrthoDB" id="381612at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027470">
        <property type="entry name" value="Cation_efflux_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036837">
        <property type="entry name" value="Cation_efflux_CTD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16916">
        <property type="entry name" value="ZT_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160240">
        <property type="entry name" value="SSF160240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01297">
        <property type="entry name" value="CDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="115"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="ZT_dimer" evidence="7">
        <location>
            <begin position="220"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="34163" checksum="BDA02B9BBB3DFC36" modified="2011-01-11" version="1">MQEQDMGKRAMVSAWISLISNILLTGIKIIAGLMFNSKVLVADGVHNAGDVIASATALGAMRISSQPPDEDHPYGHGKAEVIGASVVAVILFGAGIFIGYHSIAALFEPMPQEHILALVAAIISLLWKQWLYLYTIRIGRAANSQGLIATAKDHLADVYASGAAVLGIGLGLIGEHWDIPILSYGDPIAGFVVALLVLKLAWEMGRESIDVLMEKAIATEEIESYAAAALSVAEVQRIDRIRAREHGHYIIVDIRASVDASLTIQQGHDIIRLIKRAVMKREPRVYEVLVHLNPWYADDLHAVKSTEKEPEDKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Q1</accession>
    <name>E3E7Q1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Phosphotyrosine protein phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfkJ</name>
        <name evidence="5" type="ORF">PPSC2_13555</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the low molecular weight phosphotyrosine protein phosphatase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371459.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01240"/>
    <dbReference type="EnsemblBacteria" id="ADO56856">
        <property type="protein sequence ID" value="ADO56856"/>
        <property type="gene ID" value="PPSC2_13555"/>
    </dbReference>
    <dbReference type="GeneID" id="66577269"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2885"/>
    <dbReference type="eggNOG" id="COG0394">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071415_2_3_9"/>
    <dbReference type="OMA" id="TGSWHVG"/>
    <dbReference type="OrthoDB" id="2062716at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006470">
        <property type="term" value="P:protein dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017867">
        <property type="entry name" value="Tyr_phospatase_low_mol_wt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00719">
        <property type="entry name" value="LMWPTPASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00226">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="4">
        <location>
            <begin position="2"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="17377" checksum="12511CC1E48D9366" modified="2011-01-11" version="1">MINVLFVCLGNICRSPMGEAILRHKAKERGLDAEIRVDSAGTGDWHIGNPPHEGTLKQLKLHGISEQGIQARQITDRDFDAFDYIVCMDDSNERNMRKLAGGADADILKFMDLLPQEKLREVPDPYFTGNFEETYRLLDAGCEALLDKIIEEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R3</accession>
    <name>E3E7R3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA-binding protein Hfq</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">hfq</name>
        <name evidence="2" type="ORF">PPSC2_13960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homohexamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the Hfq family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371546.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01615"/>
    <dbReference type="EnsemblBacteria" id="ADO56946">
        <property type="protein sequence ID" value="ADO56946"/>
        <property type="gene ID" value="PPSC2_13960"/>
    </dbReference>
    <dbReference type="GeneID" id="66577187"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2982"/>
    <dbReference type="eggNOG" id="COG1923">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113688_0_2_9"/>
    <dbReference type="OMA" id="QQMVYKH"/>
    <dbReference type="OrthoDB" id="1989988at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01716">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00436">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005001">
        <property type="entry name" value="Hfq"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34772">
        <property type="entry name" value="PTHR34772"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17209">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02383">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0346">Stress response</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9088" checksum="EB0FF7002D9AFD41" modified="2011-01-11" version="1">MNKSINIQDTFLNQLRKDSIPVTVYLINGFQVRGTIKAFDNFTIVIDSDGKQQLIYKHAISTFTPQRNVSLVQQDNASDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R9</accession>
    <name>E3E7R9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spore coat protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cotE</name>
        <name evidence="2" type="ORF">PPSC2_13990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371552.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01645"/>
    <dbReference type="EnsemblBacteria" id="ADO56952">
        <property type="protein sequence ID" value="ADO56952"/>
        <property type="gene ID" value="PPSC2_13990"/>
    </dbReference>
    <dbReference type="GeneID" id="66577181"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2988"/>
    <dbReference type="eggNOG" id="ENOG5031NH1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_109780_0_0_9"/>
    <dbReference type="OMA" id="GCWIINH"/>
    <dbReference type="OrthoDB" id="1996039at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018901">
        <property type="entry name" value="Spore_coat_CotE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10628">
        <property type="entry name" value="CotE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0946">Virion</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="163"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="20401" checksum="3D192AA9D6D5C43A" modified="2011-01-11" version="1">MALSHKNRREIITKAICGKGRRFSTVTHTVTPPNNPTSILGAWIINHQYEAVAAGDGIEVIGTYDINIWYSYDKNSQTDVAKETVSYVENVPLSYLDPKHRASTVEVSAEATQEPSCVEASVSSGGGSVMIRVEREFAVELVAETKIVVEVFPYGSSDDFDKDFDFGAEEGDYEELDPDLIDDEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7W0</accession>
    <name>E3E7W0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD/NADP transhydrogenase alpha subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56993.1"/>
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    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01845"/>
    <dbReference type="EnsemblBacteria" id="ADO56993">
        <property type="protein sequence ID" value="ADO56993"/>
        <property type="gene ID" value="PPSC2_14190"/>
    </dbReference>
    <dbReference type="GeneID" id="66577141"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3029"/>
    <dbReference type="eggNOG" id="ENOG50337RH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2521831_0_0_9"/>
    <dbReference type="OMA" id="PENYLIR"/>
    <dbReference type="OrthoDB" id="1909370at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10260" checksum="510D4E5DC0253C52" modified="2011-01-11" version="1">MKCISVYTDNFEAFSDIFEQIVTTEFAENEERELEGITVSHSGDVPEHYLERMSQKPEVVVMKDKSRGITILQHGQVFEILLPVLETAAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7W2</accession>
    <name>E3E7W2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Dihydrolipoamide succinyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_14200</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01855"/>
    <dbReference type="EnsemblBacteria" id="ADO56995">
        <property type="protein sequence ID" value="ADO56995"/>
        <property type="gene ID" value="PPSC2_14200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3031"/>
    <dbReference type="eggNOG" id="COG5401">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_080926_1_0_9"/>
    <dbReference type="OMA" id="TMFQFKE"/>
    <dbReference type="OrthoDB" id="1396843at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019606">
        <property type="entry name" value="GerMN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10646">
        <property type="entry name" value="Germane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168249" evidence="2">
        <location>
            <begin position="25"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="Germane" evidence="3">
        <location>
            <begin position="93"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="23313" checksum="63792CE6A4082A93" modified="2011-01-11" version="1">MNKKIVIAGLLALFAIAGAGCASKQTSAPATPSQETQTSAAQNSTPEQTTPDPSAQSAENNGASQTPATPSTEPTKTKTDTEKSGDRQTQQITVYYTDTQENGLKEQKKEITYPSELEKFQKAFEALQKSGDSALIPLWSEKITVHKIKLDNGALTFDISLPDEARLGAGGEELAIDALKQTMFQFKEVKTLDLLVDGQSLESLMGHVDLEHPMSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E861</accession>
    <name>E3E861_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">DNA repair protein RecN</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4 5">Recombination protein N</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">recN</name>
        <name evidence="8" type="ORF">PPSC2_15040</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">May be involved in recombinational repair of damaged DNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the RecN family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371767.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02660"/>
    <dbReference type="EnsemblBacteria" id="ADO57174">
        <property type="protein sequence ID" value="ADO57174"/>
        <property type="gene ID" value="PPSC2_15040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3210"/>
    <dbReference type="eggNOG" id="COG0497">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018297_3_1_9"/>
    <dbReference type="OMA" id="QVICVTH"/>
    <dbReference type="OrthoDB" id="1074831at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004604">
        <property type="entry name" value="DNA_recomb/repair_RecN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11059">
        <property type="entry name" value="PTHR11059"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003128">
        <property type="entry name" value="RecN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00634">
        <property type="entry name" value="recN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC_N" evidence="7">
        <location>
            <begin position="7"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="328"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00033408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR003128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="572" mass="64485" checksum="64663209E57D0021" modified="2011-01-11" version="1">MLVTLSIRNLAVVEAVDVHFYKGFHVLSGETGAGKSIIIDALGLIAGGRGSADLVRYGCDKAEMEALFELPVKHPVWNTLEEQGIKANPEEHLLIRRELTVQGKSSSRINGQMVNLTMLREVGEQLVNIHGQHEHQSLLRADRHLALLDTFGDSVIGPVKALYRERYNAFVKAEKEVRELQSSSQKAYQLLDMYRFQLEEIAAAELKLGEDELLAEERVKLSHSEKMMDGVSGAYELLSGRGGLDTVNNVLSRLNDVQSYDSKSLQPIAEQIQSAFYQLEDAAFQLRSYREDIEFNPGKLHEVEQRLNQITGLQRKYGDSIEQILEYYSRIEQETDLLENKDERLEQLIAKRDELLSDLLEIAEELTEAREICAEELAEQVEQELKDLQMERTSLKVRIDPIEDPRGYEYKGLKVRPTKQGIDNAEFLISPNPGEPLRPLGKIASGGELSRIMLAMKSIFARHDQIPVLIFDEVDTGVSGRAAQSIAEKLYRLSSVCQVFSITHLPQVACMADHQYLIEKNIHDGRTMTQIEGLTEEGRVKELARMLGGVEITEKTLHHAQEMLNLAEGKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E864</accession>
    <name>E3E864_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ftsJ</name>
        <name evidence="3" type="ORF">PPSC2_15055</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TlyA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371770.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02675"/>
    <dbReference type="EnsemblBacteria" id="ADO57177">
        <property type="protein sequence ID" value="ADO57177"/>
        <property type="gene ID" value="PPSC2_15055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3213"/>
    <dbReference type="eggNOG" id="COG1189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058015_3_0_9"/>
    <dbReference type="OMA" id="VLMVKPQ"/>
    <dbReference type="OrthoDB" id="1670446at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004538">
        <property type="entry name" value="Haemolysin_A/TlyA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002877">
        <property type="entry name" value="RNA_MeTrfase_FtsJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32319:SF0">
        <property type="entry name" value="PTHR32319:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01728">
        <property type="entry name" value="FtsJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005578">
        <property type="entry name" value="TlyA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00478">
        <property type="entry name" value="tly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S4" evidence="2">
        <location>
            <begin position="6"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="31138" checksum="1B655952065D1CF9" modified="2011-01-11" version="1">MSVPKERIDVLLVEQGFFESREKAKAAIMAGLVLADSERIEKAGMKVPRSSELKVKGSVHPYVSRGGLKLEKAIRQFELDMKGRTMLDIGSSTGGFTDCALQHGAQYVYAIDVGYNQLDWSLRNDERVCVMEKTNFRYMTPADLGGPVPNFASIDVSFISLRIILPPLLALLHQPADIVALIKPQFEAGREKVGKSGVVRDPATHKEVLQTILMFAHELGLSLQGLAYSPITGGEGNIEFLAHWRLNGLPAAESQLEKMDFSPLIEQTVQEAGQTFNNGPSRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G3</accession>
    <name>E3E8G3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_16645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372097.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03980"/>
    <dbReference type="EnsemblBacteria" id="ADO57512">
        <property type="protein sequence ID" value="ADO57512"/>
        <property type="gene ID" value="PPSC2_16645"/>
    </dbReference>
    <dbReference type="GeneID" id="66576717"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3552"/>
    <dbReference type="eggNOG" id="COG4839">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_150009_0_0_9"/>
    <dbReference type="OMA" id="YAHIYQI"/>
    <dbReference type="OrthoDB" id="1830437at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="73"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="14651" checksum="267A2F567790752F" modified="2011-01-11" version="1">MAYTRGNLAVKERARQEQVQQQRYRETTKVVTRRRELPIREKLLYLLTLVACIVIAGTLIGRYAHIYQINYAINTASKDISKLQTNIAQLKIQKERLENQIVPTAKEQGYIEPTREPIRVEKQAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8J4</accession>
    <name>E3E8J4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_16785</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372127.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04120"/>
    <dbReference type="EnsemblBacteria" id="ADO57543">
        <property type="protein sequence ID" value="ADO57543"/>
        <property type="gene ID" value="PPSC2_16785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3582"/>
    <dbReference type="eggNOG" id="COG1167">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_0_6_9"/>
    <dbReference type="OMA" id="MRLNFTY"/>
    <dbReference type="OrthoDB" id="1024978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="29"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="406" mass="45173" checksum="E713A6A5A2A1A633" modified="2011-01-11" version="1">MEYKFSGMARTQGSSMVRDILKLTQGTDVLSLAGGLPADAFFPVEAVAKAYERVFRLGGTTALQYGLTEGYIPLRERLAAIMSSQGISVTRDNILMTTGSQQTIDLVSRVLLDPQDTVLVESPTYLAALQVFNSYGANIVSVNTDANGMQLDDLEAKIKQHQPKFVYVIPTFSNPAGSVWSMERRTGVVELCRKYGTLIFEDDPYGRLKFDENLNFPSLFSIDQQLGGDGHVMYTSTFSKTVAPGVRSGWLVADQAIVVKTANAKQSADLHSSSIDQRALNELLDFFDLEGHIRTVSAEYHTRMLRLTSLMRERQWEGITWNDALGGMFMWVTLPEGFRSDQLLQLAIQEGVAFVPGQVFYADLSGSNHMRINFTHTDPALLPKAVDRLDRALKLYMEKNVVKSVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8N4</accession>
    <name>E3E8N4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372323.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57743">
        <property type="protein sequence ID" value="ADO57743"/>
        <property type="gene ID" value="PPSC2_17715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3787"/>
    <dbReference type="eggNOG" id="ENOG503064B">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1633759_0_0_9"/>
    <dbReference type="OMA" id="EARYVFG"/>
    <dbReference type="OrthoDB" id="1534950at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18839" checksum="12B3645D62C33520" modified="2011-01-11" version="1">MKNHDDEKSALEEAAVSIFVDLYNLNREDHLEVIERRERPDYILKSIKDGLVGLEVTHLFYDADEAKMLFGRSAEEMHGLENSASYIQVLNELLKQKEKKIEKYDAAYPIALLIRNASPIFGMSDFLRNKNAIYKPEKYTHIWFVSKDGNDNEWSLKDLLTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8T5</accession>
    <name>E3E8T5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Molybdopterin synthase sulfur carrier subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">moaD</name>
        <name evidence="5" type="ORF">PPSC2_17960</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the MoaD family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372374.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05280"/>
    <dbReference type="EnsemblBacteria" id="ADO57794">
        <property type="protein sequence ID" value="ADO57794"/>
        <property type="gene ID" value="PPSC2_17960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3838"/>
    <dbReference type="eggNOG" id="COG1977">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114601_4_1_9"/>
    <dbReference type="OMA" id="WITDQYP"/>
    <dbReference type="OrthoDB" id="1995573at2"/>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010038">
        <property type="entry name" value="MoaD_arc-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044672">
        <property type="entry name" value="MOCS2A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016155">
        <property type="entry name" value="Mopterin_synth/thiamin_S_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003749">
        <property type="entry name" value="ThiS/MoaD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33359">
        <property type="entry name" value="PTHR33359"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02597">
        <property type="entry name" value="ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54285">
        <property type="entry name" value="SSF54285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01687">
        <property type="entry name" value="moaD_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8405" checksum="81A362F006CB7536" modified="2011-01-11" version="1">MIKLYYFAGLREVTGKSEEMADLAGQTVGELCSWITDKYPDMSIKSTRIAVNEEYALLTDVLQDGDIAAFIPPVSGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8U2</accession>
    <name>E3E8U2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Nitrate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">narI</name>
        <name evidence="15" type="ORF">PPSC2_17995</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372381.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05315"/>
    <dbReference type="EnsemblBacteria" id="ADO57801">
        <property type="protein sequence ID" value="ADO57801"/>
        <property type="gene ID" value="PPSC2_17995"/>
    </dbReference>
    <dbReference type="GeneID" id="66576459"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3845"/>
    <dbReference type="eggNOG" id="COG2181">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092378_0_0_9"/>
    <dbReference type="OMA" id="MVSGGFF"/>
    <dbReference type="OrthoDB" id="1873056at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009325">
        <property type="term" value="C:nitrate reductase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008940">
        <property type="term" value="F:nitrate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023234">
        <property type="entry name" value="NarG-like_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036197">
        <property type="entry name" value="NarG-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003816">
        <property type="entry name" value="Nitrate_red_gam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02665">
        <property type="entry name" value="Nitrate_red_gam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103501">
        <property type="entry name" value="SSF103501"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00351">
        <property type="entry name" value="narI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4" id="KW-0349">Heme</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="12 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="127"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="186"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="Nitrate_red_gam" evidence="14">
        <location>
            <begin position="5"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO57801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="227" mass="26464" checksum="769114EAB1430A00" modified="2011-01-11" version="1">MMMEQFLWVIFPYMCVVIFIVGHIFRYRTDQFNWTAKSSEFIEKKQLMIGSLLFHLGIIPVIFGHVSGLGIPKTWMHALGVNDHLYHIGAVYIGGIFGAMTFLGMLILTSRRFTIRNVRRLSTASDLIVNVLLLALVCMGMFATLVTNAVQPEFDYRETISIWFRGLFIFRVDPTLMRDVPISFKLHVLMGFAIFAFWPFTRLVHVWSVPLNYVRRSYILYRRHKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9A4</accession>
    <name>E3E9A4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">3-oxoacyl-ACP synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fabH5</name>
        <name evidence="4" type="ORF">PPSC2_16005</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371963.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03695"/>
    <dbReference type="EnsemblBacteria" id="ADO57377">
        <property type="protein sequence ID" value="ADO57377"/>
        <property type="gene ID" value="PPSC2_16005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3419"/>
    <dbReference type="eggNOG" id="COG0332">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039592_2_2_9"/>
    <dbReference type="OMA" id="MDSNANC"/>
    <dbReference type="OrthoDB" id="872193at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033818">
        <property type="term" value="F:beta-ketoacyl-acyl-carrier-protein synthase III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013751">
        <property type="entry name" value="ACP_syn_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08545">
        <property type="entry name" value="ACP_syn_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACP_syn_III" evidence="3">
        <location>
            <begin position="112"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="ACP_syn_III_C" evidence="2">
        <location>
            <begin position="240"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="36798" checksum="26D55FF5B63AAFFD" modified="2011-01-11" version="1">MSHIRIKALGVHHPSHSLDNEYYVRHFDERGKDIRRFMEHMGRKQRYIIDDPNENGLTMGIAAAQKALEQAGMTGRDVDMIVFSTQVPESLFPMNALFVHQAIGARHDVAVMDSNANCAGMTVAVDQASRSMMSNPDVRTALIIGSDYNSLISDPADEITYANYGDAACAAILERTEEDTGFIDSLYYTDPINIDKILYPARGLAATLQRNAPGKFIQWLPFDANMALPPTFELLERIIKKNGLTPQDVRAYCLSQFSLANVLKIQDHLELENDQMIYVGDRYGYTGTSSPFIALYEGIESGRIRRGDYVLFWTIGAGYQLVAMLFKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J1</accession>
    <name>E3E9J1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Shikimate dehydrogenase (NADP(+))</fullName>
            <shortName evidence="6">SDH</shortName>
            <ecNumber evidence="3 6">1.1.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">aroE</name>
        <name evidence="10" type="ORF">PPSC2_17140</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>NADP(+) + shikimate = 3-dehydroshikimate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:17737"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.25"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the shikimate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.25" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372203.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04475"/>
    <dbReference type="EnsemblBacteria" id="ADO57622">
        <property type="protein sequence ID" value="ADO57622"/>
        <property type="gene ID" value="PPSC2_17140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3661"/>
    <dbReference type="eggNOG" id="COG0169">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044063_4_1_9"/>
    <dbReference type="OMA" id="FGNPIKH"/>
    <dbReference type="OrthoDB" id="1054867at2"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004764">
        <property type="term" value="F:shikimate 3-dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
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    <dbReference type="GO" id="GO:0019632">
        <property type="term" value="P:shikimate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
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    <dbReference type="HAMAP" id="MF_00222">
        <property type="entry name" value="Shikimate_DH_AroE"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
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    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041121">
        <property type="entry name" value="SDH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011342">
        <property type="entry name" value="Shikimate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013708">
        <property type="entry name" value="Shikimate_DH-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022893">
        <property type="entry name" value="Shikimate_DH_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006151">
        <property type="entry name" value="Shikm_DH/Glu-tRNA_Rdtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089">
        <property type="entry name" value="PTHR21089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18317">
        <property type="entry name" value="SDH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01488">
        <property type="entry name" value="Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08501">
        <property type="entry name" value="Shikimate_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00507">
        <property type="entry name" value="aroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5 6" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shikimate_dh_N" evidence="8">
        <location>
            <begin position="18"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Shikimate_DH" evidence="7">
        <location>
            <begin position="127"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="SDH_C" evidence="9">
        <location>
            <begin position="255"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate binding" evidence="6">
        <location>
            <begin position="26"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="98"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="138"/>
            <end position="142"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="162"/>
            <end position="167"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="231"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
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        <location>
            <position position="233"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
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        <location>
            <position position="255"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
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        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
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    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF18317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="31190" checksum="3CD54390573001B9" modified="2011-01-11" version="1">MSSGESGAIERDLVLLGVLGDPIKHSKSPLMHKIALQAAGVDGDFVPLHVTPDQLEDAVKGIRALHFRGVNVTIPHKVEIMKYLDEIDEGARLIGAVNTIVNDNGRLKGYNTDGIGYVRSLKEETSVELKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALEWTTEAIPVMGYSNEEARNVLTTVDVLINTTSVGMSPLSDELPVETSLIPEGIIVSDLIYNPLETRLLRESREQRGCTVHGGLGMFVYQGAVAFEYFTGVAPAVDQMRAAVLRSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9K9</accession>
    <name>E3E9K9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_17230</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04565"/>
    <dbReference type="EnsemblBacteria" id="ADO57640">
        <property type="protein sequence ID" value="ADO57640"/>
        <property type="gene ID" value="PPSC2_17230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3679"/>
    <dbReference type="eggNOG" id="COG1434">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053514_1_1_9"/>
    <dbReference type="OMA" id="LWFTRWQ"/>
    <dbReference type="OrthoDB" id="1879123at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="YdcF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="DUF218"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02698">
        <property type="entry name" value="DUF218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="DUF218" evidence="2">
        <location>
            <begin position="77"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="26866" checksum="8B98F03BED53E57F" modified="2011-01-11" version="1">MIYFIKFLYSFVLPPGLFILVMAGLVIWLWKRARKPAIVLLLVTLLLYISSTNLAGDVLIRSLEKQYPQPLTVQGNVIVVLGGGATEGTPDINGQGNLLGSAANRLLTAARLHEATGLPILFSGGQVFGDSGNEANIAQRQLLGLGIPAKDIFIENRSLNTQQNAVYTSKILKQHQLTKPILVTSAFHMPRAALEFQRAGMQTTAYPTDYLASEKLSLYAAKLSPSAGAISTTGTALKEYLGILALKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9N5</accession>
    <name>E3E9N5_PAEPS</name>
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        <submittedName>
            <fullName evidence="4">YdhK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ydhK</name>
        <name evidence="4" type="ORF">PPSC2_18100</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372405.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3872"/>
    <dbReference type="EnsemblBacteria" id="ADO57825">
        <property type="protein sequence ID" value="ADO57825"/>
        <property type="gene ID" value="PPSC2_18100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3867"/>
    <dbReference type="eggNOG" id="COG1388">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105728_0_0_9"/>
    <dbReference type="OMA" id="KNHKWVT"/>
    <dbReference type="OrthoDB" id="1330112at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011438">
        <property type="entry name" value="DUF1541"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07563">
        <property type="entry name" value="DUF1541"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168732" evidence="2">
        <location>
            <begin position="29"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1541" evidence="3">
        <location>
            <begin position="65"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1541" evidence="3">
        <location>
            <begin position="128"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="19699" checksum="627400DFF1CD8A20" modified="2011-01-11" version="1">MKKQWALLAGAVMIILSGCGNSNTPDQEHTTNSSQQHDTSDMNHSTSSELPAGLKEAEHPAFKIGSQATMQADHMAGMNGATATIVGAYTTTAYTVSYTPTTGGEKVTNHKWVIHEEIKDAGSEPYEPGTEVILAADHMKGMDGAKATIDSAEPTTVYMVDYTPTTGGEPVKNHKWVTESELSAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9R6</accession>
    <name>E3E9R6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carbohydrate-binding cenc domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">galA</name>
        <name evidence="3" type="ORF">PPSC2_18240</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372435.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05590"/>
    <dbReference type="CAZy" id="CBM16">
        <property type="family name" value="Carbohydrate-Binding Module Family 16"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57856">
        <property type="protein sequence ID" value="ADO57856"/>
        <property type="gene ID" value="PPSC2_18240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3897"/>
    <dbReference type="eggNOG" id="COG3291">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3420">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_372490_0_0_9"/>
    <dbReference type="OrthoDB" id="1177619at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="Beta_helix" evidence="2">
        <location>
            <begin position="324"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="746" mass="81010" checksum="9D51B1189EC92671" modified="2011-01-11" version="1">MNKRIGFRFLVVIMMIYVFTFNLGVETVKANSVYYVSTTGNDITGTGTLSNPWKTIQKAADIMTAGDTCIIRGGTYQETVTLHTSGTSANPINFEAYTGENVTVSGADPVTGWKNYSGSIYYAEMKGSLGTKNQIFVNKQMQFEARWPNSSTLDPLNSTYATVDSGSTTTIKDGDLTQAPGYWVGKTVWSVPGTGYKSYKSTITSSSDGSITFDQIDTAATGGNSYYITGNLKDLDSAGEWYYDSITGRLYLWAPGGVDPNTLTVEAKKRTYAFDLSSHSYINITGINIFASSIKMSNSNYCKVSNMIAEYVSHDSDVTRQYSTGIFMSGTNNELRDSTLTYSSGNLVSIEGTGNKVINNLIHEANYSAADIPAIYLLGANHLISHNTVYNAGRHLIFMPTQNSQIQYNNLYNAGKLTKDCGILYEFAWDGQGTVIHHNYIHDNLAKNYSGTGIYLDNGSKGYIVHHNVVWGNYTGIRLNTPSNFNLIYNNTTYSNGNVGYWGSNFQSDMYGDRIFNNIFTTAFTLPGTHIEGNNITSETNPLFVNPPAYDFRLQSTSPAINAGAVISGITNDYVGAAPDIGAYEFGGTDWTAGHDFSSPPDPVFESVSLLYVNNVRQSDFEKGIISPWAATYSDTAASVSVPRSGSKSVKLGPGEDGIEQVLTGLSPNTSYMCTAWVKADIGERIQIGVNGFEGTDASATSDSTTWTMVNIPFTTGAGATRATVYAYKNSGTGYVYVDDFGVVEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA26</accession>
    <name>E3EA26_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dgtA</name>
        <name evidence="2" type="ORF">PPSC2_19690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372731.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06910"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58159">
        <property type="protein sequence ID" value="ADO58159"/>
        <property type="gene ID" value="PPSC2_19690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4198"/>
    <dbReference type="eggNOG" id="COG1215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_741549_0_0_9"/>
    <dbReference type="OMA" id="YLEGMRT"/>
    <dbReference type="OrthoDB" id="368051at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="129"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="373" mass="42846" checksum="3F338D69BC6D4440" modified="2011-01-11" version="1">MQGPIAIFSDNNRAIDYPNVICFYQYIQCEDTETASVYEDACCCLIDYREPGQAVRKANQIRSQFPQMPLLLVTDVTFPFSDQHMVQIIGVGRLRLLFWQANDTEEIISEIQSLLYPEYSTKSQHVAFILSVYNEEKRFVHVKTFAERLQTFIRSHIIEGSIYLIDDGSHDGTNALIKALEAATDLSVNRINQNLSPLLQTRELGRNTRKAGTYLEGMRTIGADYYVFVDADDSFFIEDIARMINVVQQGYYDVVIGTKDMTAENRSLLRSIVSFGKRVVSRPFLPTGVVDSQTGLKVMSSVAVKRMFPHLKEQLGLALDLEMMFIAKRLQLRVLQLPVKCIDRDGSHIHVWKDSIRFLRSIIEIWRLDRRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAE5</accession>
    <name>E3EAE5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqkF</name>
        <name evidence="2" type="ORF">PPSC2_21640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373130.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08835"/>
    <dbReference type="EnsemblBacteria" id="ADO58563">
        <property type="protein sequence ID" value="ADO58563"/>
        <property type="gene ID" value="PPSC2_21640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4601"/>
    <dbReference type="eggNOG" id="COG0667">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_3_9"/>
    <dbReference type="OMA" id="WGMSEAG"/>
    <dbReference type="OrthoDB" id="1054546at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="15"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="33863" checksum="82BC2BCA074F2F3D" modified="2011-01-11" version="1">MKKNRLGSSDLLVGEIGLGCMSVGTEEQQAVYLIHEALDRGVNLLDTADLYQHGRNEEIVGSAIRGRRQDVILATKVGNRRIPGQEGWEWDPSKKYILSAVKESLRRLGTDYIDLYQLHGGTINDPIDETIEAFEQLQQEGVIRYYGISSIRPHVIREYVERSNIVSVMNQYSLLDRRAEEEVLSLLQERGISVIARGPVASGVLADKGEEKAAKGYLDYEEAELLDVRKQLKAFAGPERSMEQTAIRYSLSHTAVAAVIPGASSLGQLEHNISAADIAPLTEHERETLQQISRANRYDAQYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAJ6</accession>
    <name>E3EAJ6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein-arginine kinase</fullName>
            <ecNumber evidence="5">2.7.14.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">mcsB</name>
        <name evidence="9" type="ORF">PPSC2_22585</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the specific phosphorylation of arginine residues in proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + L-arginyl-[protein] = ADP + H(+) + N(omega)-phospho-L-arginyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:43384"/>
            <dbReference type="Rhea" id="RHEA-COMP:10532"/>
            <dbReference type="Rhea" id="RHEA-COMP:10533"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29965"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83226"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.14.1"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="5">Appears to be allosterically activated by the binding of pArg-containing polypeptides to the pArg-binding pocket localized in the C-terminal domain of McsB.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6 7">Belongs to the ATP:guanido phosphotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.14.1" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373293.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10050"/>
    <dbReference type="EnsemblBacteria" id="ADO58754">
        <property type="protein sequence ID" value="ADO58754"/>
        <property type="gene ID" value="PPSC2_22585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4788"/>
    <dbReference type="eggNOG" id="COG3869">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066591_1_0_9"/>
    <dbReference type="OMA" id="IIMQERV"/>
    <dbReference type="OrthoDB" id="904915at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004111">
        <property type="term" value="F:creatine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046314">
        <property type="term" value="P:phosphocreatine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07930">
        <property type="entry name" value="bacterial_phosphagen_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00602">
        <property type="entry name" value="Prot_Arg_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023660">
        <property type="entry name" value="Arg_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000749">
        <property type="entry name" value="ATP-guanido_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022415">
        <property type="entry name" value="ATP-guanido_PTrfase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022414">
        <property type="entry name" value="ATP-guanido_PTrfase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11547">
        <property type="entry name" value="PTHR11547"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00217">
        <property type="entry name" value="ATP-gua_Ptrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00112">
        <property type="entry name" value="PHOSPHAGEN_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51510">
        <property type="entry name" value="PHOSPHAGEN_KINASE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="4 5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="2 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phosphagen kinase C-terminal" evidence="8">
        <location>
            <begin position="24"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="RDXXRA motif of the pArg binding pocket involved in allosteric regulation" evidence="5">
        <location>
            <begin position="338"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <begin position="27"/>
            <end position="31"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <position position="126"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <begin position="177"/>
            <end position="181"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <begin position="208"/>
            <end position="213"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="354" mass="39942" checksum="A9D28E7E2C35630B" modified="2011-01-11" version="1">MPNIRFTEKPLSDWMRGDAADSEIVISSRVRIARNLQHLPFPMLATNQQSEEVLQRLTDILQYDDLRRFGTFHTLKISELDEIDKQVLVEKHLISPNLANESRNGAVLISDDESVSVMINEEDHLRIQCLYPGCQVREAWERAMVIDDAFEAHVDYAFDDRRGFLTSCPTNVGTGMRASVMMHLPALVMTHQINRILSAVSQVGLTVRGIYGEGSEAVGNLFQVSNQITLGQTEAEIIENLHGVVLQIIEHERSARERLMNESMLRITDRVMRSFGILSYAAVLDSKEAAQRLSDVRLGVDLGILERPSIAAMNELNVMTQPGFLQKSFGDKMNTGERDMYRAKLIRQKLGTTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAJ9</accession>
    <name>E3EAJ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_22600</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4815"/>
    <dbReference type="EnsemblBacteria" id="ADO58757">
        <property type="protein sequence ID" value="ADO58757"/>
        <property type="gene ID" value="PPSC2_22600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4791"/>
    <dbReference type="eggNOG" id="COG4552">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050659_1_1_9"/>
    <dbReference type="OMA" id="WNEGRWR"/>
    <dbReference type="OrthoDB" id="1497065at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041380">
        <property type="entry name" value="Acetyltransf_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025559">
        <property type="entry name" value="Eis_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036527">
        <property type="entry name" value="SCP2_sterol-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17668">
        <property type="entry name" value="Acetyltransf_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13530">
        <property type="entry name" value="SCP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55718">
        <property type="entry name" value="SSF55718"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="395" mass="45765" checksum="ED239C2599A455E4" modified="2011-01-11" version="1">MKIRQLQREEFEAAIELSQYAFQFTMPPEDLEKAKKKFKPEQTWGIFDGHELNAKLTLLPLQVYIHGQVFDMGGIAGVATWPEKRRGGMVSRLLTHALEEMKTAGQSLSFLHPFSFAFYRKFGWETYTEYKKYVIPIDKFPAKLKTEGIVKRDIKNISELDQVYQSYASRYNGTLVRDKEWWQERILNENYRTVVYYTDAGNPQGYALYKIEDKQLNCDELVYENETARRALWTYFANHDSMITQGKFIYVPADDNLPFLLDDPRIQQETVPYFMGRIVDAVAFVERYPFEQIGEETSLTLHLTDRYAPWNEGVWRLTITTEGQGHLARVDTSNLSDNALAADLKLGIQSLTTLMLGYQQADNLSNWGRIEGSSKSVAALKRVIPIKQTFLLDFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB18</accession>
    <name>E3EB18_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Quaternary ammonium transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">qacH</name>
        <name evidence="6" type="ORF">PPSC2_25080</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59298.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016822518.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12575"/>
    <dbReference type="EnsemblBacteria" id="ADO59298">
        <property type="protein sequence ID" value="ADO59298"/>
        <property type="gene ID" value="PPSC2_25080"/>
    </dbReference>
    <dbReference type="GeneID" id="66575057"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5315"/>
    <dbReference type="eggNOG" id="COG2076">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133067_0_2_9"/>
    <dbReference type="OMA" id="KWKPSAL"/>
    <dbReference type="OrthoDB" id="1921902at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000390">
        <property type="entry name" value="Small_drug/metabolite_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045324">
        <property type="entry name" value="Small_multidrug_res"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30561">
        <property type="entry name" value="PTHR30561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00893">
        <property type="entry name" value="Multi_Drug_Res"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59298.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="13082" checksum="74C6FCDCC7E3543F" modified="2015-05-27" version="2">MAYFFLAISIASELIGTSMLKASEGFTRLYPTLFTIVAFVISFFFISLTLKTLPLNMTYAIWSGVGAVATTVISVLIWKEKINTGSIVGIALIVIGVVVLNLFGAGHGEAKGTTEATSSIVQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB51</accession>
    <name>E3EB51_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">LPS biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_25230</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5395"/>
    <dbReference type="EnsemblBacteria" id="ADO59331">
        <property type="protein sequence ID" value="ADO59331"/>
        <property type="gene ID" value="PPSC2_25230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5348"/>
    <dbReference type="eggNOG" id="COG1511">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2247">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_232108_0_0_9"/>
    <dbReference type="OMA" id="GDHKADF"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008969">
        <property type="entry name" value="CarboxyPept-like_regulatory"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001434">
        <property type="entry name" value="DUF11"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49464">
        <property type="entry name" value="SSF49464"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01451">
        <property type="entry name" value="B_ant_repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168312" evidence="3">
        <location>
            <begin position="34"/>
            <end position="2045"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="2018"/>
            <end position="2036"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1859"/>
            <end position="1994"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1870"/>
            <end position="1994"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="2045" mass="218155" checksum="03F10760A4B85536" modified="2011-01-11" version="1">MKQKSSLGKTMLSFCLAVLLVLQTVVFPAAAYADDESGSQNAAESPSVSEAVYGAPDQPSSATEAVYAPLLTFAALTANLTDKTAVLANANPTFKLTVKQGNPEAVVPAGGEINGRENFTLELDSIAVPTKGDDLNAPPESVIQQGDYAVLDKATYFPGVNLAPTGPMPINQGGLKIATVQFFADSIKITFDGAGVYDGSRRDVKIGFSAAARAADQTPGGGGDTTIFGDGYKFKNSDLVPEYTITVSSLSNGGYDSGINSPSFQEGTITWRAVVTATDTDDKTIPMRLDGLTFSDELANVGVYVPGSFTVDGNAADPNYAADRTLFYKFPDASTVDNVKSTATITFKTWIPKNSYYYEKNGNFADQYGWNRIDNTAKLLGDATDVKASSNTHRIAIRPNWIAASGKPGKSGNDTLITWTVEVNKRINNNGVLSRTGLQNVKITDVLPDGTEFVSATYKNGDSGTDTPITRNAAGEYEIGTAIGGNLDGPLYMTVVTKVTDSSKLIFDYKARANWELDVKDGGTAIQNNDATGWVAPAAVVDTAQVRIGAHAFTKSATTTTALHNVAGTKWTINLTLQYNLDAPVVYDLLVHGDSLDVLNNLDANPKVTSTTLEAIKSQIDTKQLWQKYRENTLTVSNGLNGEVIPLTVNGERVADLIKVTGYKGDVPGSVSFESVTTNPDNLFRQDNAGNTWSNRGLLFDGDDYVSRAEANTSNLVRMLNKEMLYANTAGLEGVAADWNRNYSGQWSDSIWKRTPVASDPNWYMDNSRPDNYILAGYDRKDRTVTFRLAVNMPGFNTEEMAKDGGTRVASDIKLVDVLPEGWEFVDYAPGEAYRLYKGGTGYRTDGKGGSGRYAQAISVIAPGTPQHVVSFTKDGNEGTFTFSKLESPYVILVKARPTNAALANYKLGNNNAGENQAMFSMKWGDKPYSATEAHRIIVPVQSLSKTVQKPVSGVQEWTVNYTPPFEMKPGVYLLDTLAKGLKLRQNAEGGLSLEPSDIAVYPGKLKPDGTLERNGGPLNLADPNSEVKVTIGTDPVTGGSTLRFDFVDPNKFYQIVYQTESQGMQPGTAGNSIKLMGDDSLPPIGAQSSIMLDANDVAGSANENGLLFLKKVGPDGITPLKDVKFQLLNPDGTPARDKENNVMVEKTTGTDGKTNFIIQVPGDYLLKQTYIDLLTYLPTTTIYRVRVIDAPGKPVLVDGQKVESNNPLIVPTPAEGKLTISNKVEGNGSDPDKEFEYTVTFNGEGKDGEYTYKKPDNTYGKIKSGDKITLKHGQTVMLPILPAGLVYTVTEGDYTTVDGYTTDPETREWSGTIVNKGDHKADFVNERIVNKLTISNTVMGNGGDKAKEFEYTVSFAGVGKDESYSYVKSDGDKGSIKSGGTLRLKDGETLDVLDLPKNLTYTVTQKDYTTDEYMTTPGERYYTGVMKGKDEVAPFKNMRVMTGSLLISNKVQGNGGNKTKAFKYKVTFTGEGANGSYSYEKSDGSKGTIKSGDTFELKDEELFIVEGLPTYLQYTVTEDNYTDDGYVTDPASLIRTGTIPVKSAAEAHFVNTRQLPVLEGVLRDNNTGEVIPNASITVTNLKTGEKQTIQTNEKGEYSVIAEAATDYTITFTKWYPVGGKDVPVEFTQKANVDSSVTDETVPADITAVGIVLLKQPEGQTSLLDSKLAGKMHIYLRDASNQYVVDKNGAPKAFNLESNGVFSADGLAAKTYKMEVRYEVAPGQELTVLQADLDVKANGELNISQGLVDPYGIITDATTGMVIEGAEVTLYYADTPGNTASGIVPGTKVTLPAIPGFAPNDNASPSQNSDANGAYAYMVFPNTDYYLVVTKAGYDAYTSPTISVGSDIVRHDIQLKPIISGGGGGGNSGGSGGGTGSGSGSSGTDNSDDGAGNVNNGASNVNNGASNVNNGASNVNNGASNVNNGASNVNNGTSNVNNGASNVDNGASNVNNGASNVDNRASDVNNGAGNVNNGAGNVNNEINKGNNASGSVVDNEVANGDYELDDAPKTGDSSPSPIFYMVLALISLITIGFCLLSGKKKKHIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB62</accession>
    <name>E3EB62_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sinR</name>
        <name evidence="2" type="ORF">PPSC2_25275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373875.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5406"/>
    <dbReference type="EnsemblBacteria" id="ADO59342">
        <property type="protein sequence ID" value="ADO59342"/>
        <property type="gene ID" value="PPSC2_25275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5359"/>
    <dbReference type="eggNOG" id="COG1396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_17_5_9"/>
    <dbReference type="OMA" id="ERGSNNI"/>
    <dbReference type="OrthoDB" id="2063007at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="13053" checksum="87F63F78C3CA9563" modified="2011-01-11" version="1">MSLPESVGNRIRELRKAKGWTQEQLAEAAGLHYSYIGGVERGDRNISLETLEKIILALKVPPFELFQFDETTDRKQIINELMLLINSRETTELEILTTITKNIVGLIELQQKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBC8</accession>
    <name>E3EBC8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_21155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58460.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324720.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08385"/>
    <dbReference type="EnsemblBacteria" id="ADO58460">
        <property type="protein sequence ID" value="ADO58460"/>
        <property type="gene ID" value="PPSC2_21155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4497"/>
    <dbReference type="eggNOG" id="COG2263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031012_1_0_9"/>
    <dbReference type="OrthoDB" id="880894at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025714">
        <property type="entry name" value="Methyltranfer_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13679">
        <property type="entry name" value="Methyltransf_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltranfer_dom" evidence="1">
        <location>
            <begin position="162"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58460.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="404" mass="46135" checksum="0359A5BA6A167773" modified="2015-05-27" version="2">MKESEMYLLDSLRELVYQLTTGGSLITATLSQLRKREDASFTKVQIKPVELKNKLHYQFAFHYSNKVIHENLTPDEANERMTALFEDTFRQGLLCAKDADYQVLISKKYKVSILTKSPSKSKADLSHNRKKQYVLEEGERIPFLIELGIMNEDGKVLARKYDKFRQINRFLEMVQDVLPSLPVGRPLTIVDFGCGKSYLTFALYHYLAVQQKRPLQIVGLDLKADVIETCNLLAQKLQYRQLEFLVGDIADYNELEQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFSQLENPVLEPLLSHGILKERFSALATDGIRAKLLDMMGYRTQLLEFIDMEHTPKNILIRAVKGQAGERSVLWREYTAFRDFIHADPYLERACADLLPEGAGQQQTHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBE9</accession>
    <name>E3EBE9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yoaK</name>
        <name evidence="2" type="ORF">PPSC2_21925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373189.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4677"/>
    <dbReference type="EnsemblBacteria" id="ADO58623">
        <property type="protein sequence ID" value="ADO58623"/>
        <property type="gene ID" value="PPSC2_21925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4665"/>
    <dbReference type="eggNOG" id="COG3619">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079303_0_0_9"/>
    <dbReference type="OMA" id="WMRHTAF"/>
    <dbReference type="OrthoDB" id="1725002at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010699">
        <property type="entry name" value="DUF1275"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06912">
        <property type="entry name" value="DUF1275"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="25392" checksum="81B419E0777D13C9" modified="2011-01-11" version="1">MFMKGKIHLHQVTSESLRLGALLSLVGGFLDTYTFVGRGGVFANAQTGNIVLLAVKVIQGHWIQALSYIPPLIAFSLGVFVAEGIKRKSTHRLTPDWTRAILLLEIAIFFIVGLIPQGVPNTVVVVIVSFVASVQMTSFRKLIDVPYTSTVSTGNLRSATEAMYIAITTKDTNAAIRAMRYGVILAAFLLGALLGGFLTLTIGDKAIWGAVVALIFSFILFTEEEKWKLPLRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF6</accession>
    <name>E3EBF6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase type 11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE8</name>
        <name evidence="2" type="ORF">PPSC2_21960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4684"/>
    <dbReference type="EnsemblBacteria" id="ADO58630">
        <property type="protein sequence ID" value="ADO58630"/>
        <property type="gene ID" value="PPSC2_21960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21960"/>
    <dbReference type="eggNOG" id="COG0500">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1794580_0_0_9"/>
    <dbReference type="OMA" id="LMHWLDR"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="6"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="20141" checksum="B33E39D7A0A09AB0" modified="2011-01-11" version="1">MFNPLYYVGIDPDAQRIDYAKRLYSHHAFQVFNSNNLPFDNESFDYILIIAVLHHISSDEISSYMKEFQRILKPNGTIVIMEPCLSKKKPLCNWFMKWYDNGEYIRNEKEYIQLFRDQDYDCRVLKRFRKCFLYHELFFSVKPKSLMGGENNNDYYKHKRILDALY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBL9</accession>
    <name>E3EBL9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Flagellar hook-associated protein 2</fullName>
            <shortName evidence="5">HAP2</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Flagellar cap protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fliD</name>
        <name evidence="8" type="ORF">PPSC2_22980</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 5">Homopentamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the FliD family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373375.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4897"/>
    <dbReference type="EnsemblBacteria" id="ADO58837">
        <property type="protein sequence ID" value="ADO58837"/>
        <property type="gene ID" value="PPSC2_22980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4866"/>
    <dbReference type="eggNOG" id="COG1345">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015182_0_2_9"/>
    <dbReference type="OMA" id="TLEWQRD"/>
    <dbReference type="OrthoDB" id="883503at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009421">
        <property type="term" value="C:bacterial-type flagellum filament cap"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009424">
        <property type="term" value="C:bacterial-type flagellum hook"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040026">
        <property type="entry name" value="FliD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010809">
        <property type="entry name" value="FliD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003481">
        <property type="entry name" value="FliD_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30288">
        <property type="entry name" value="PTHR30288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07195">
        <property type="entry name" value="FliD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02465">
        <property type="entry name" value="FliD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="8" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0969">Cilium</keyword>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-0282">Flagellum</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="FliD_N" evidence="6">
        <location>
            <begin position="7"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="FliD_C" evidence="7">
        <location>
            <begin position="229"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF07195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="485" mass="52725" checksum="56BE931571CF1542" modified="2011-01-11" version="1">MRINGFSGMDIDSMVTSLMTAKKAPLNKLNQQKQILEWTRDSYRELNSKIVDFRTKLSEFKLSPAMNTQQAVVSGNTTAIKADANANASGAAMAVQVTSLAQKSNMTSESKLTSSSTDATLTTKIGDLSTSTGAADYTVTINGKSLTFSSDKTIANVINTISTDADMKVNASFDEVSGKFSITSKDYGTNLTDGSGTLKTLLGMGTIQNATAGTVRISTDGGSSFKEFTTNNNSLTVNGITLTLLSTNTSTDLARIQTQTDPAKALDTIKNFVQNYNDLLNTFGSKVKEEKYRDYQPLTDEQKKDMKENDITLWEQKAKSGLLKNDNILSSAVSSMRSVITGSLGDLSAIGITTGQYYENGKIYINEEKLKVALQSDPQKVMNIFQGSADGATPGIYSKISDEMNGTLDLLAKKAGTSKYSSDVNSIFKTESIMGKQLADYNKRISDMKSRLSDMETRYYKQFSAMEEAMNKYQSQSSSLTSFLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM4</accession>
    <name>E3EBM4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Rhamnosyl O-methyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_23005</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD).</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the rhamnosyl O-methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373380.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4902"/>
    <dbReference type="EnsemblBacteria" id="ADO58842">
        <property type="protein sequence ID" value="ADO58842"/>
        <property type="gene ID" value="PPSC2_23005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4871"/>
    <dbReference type="eggNOG" id="COG3510">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063868_1_0_9"/>
    <dbReference type="OMA" id="MIQGSSI"/>
    <dbReference type="OrthoDB" id="1831745at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007072">
        <property type="entry name" value="Rhamnosyl_O-MeTrfase_CmcI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04989">
        <property type="entry name" value="CmcI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="28106" checksum="E8BA8E0176AC90DF" modified="2011-01-11" version="1">MDRERFELEKKENIKRQATDVKLRNTARDFILQQFEHNYTYNFTWLGMPIIQFPQDIISLQEIIWKVKPDVIIETGIARGGSIIFHSSMQRLIGNNGIVIGIDIDIRSHNREAIENHPFANHVYLIEGDSTSFEVMDQVKELISGGKSVLVILDSNHTHDHVLKELEVFSPLVTNGSYLVVLDTIVEDMPDHFFKDRPWRAGNSPKSAVKQFLKENKRFTVDRDIEDKLLITVAPEGYLKCVSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBR4</accession>
    <name>E3EBR4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ</fullName>
            <ecNumber evidence="9">4.2.1.59</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase</fullName>
            <shortName evidence="9">(3R)-hydroxymyristoyl-ACP dehydrase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Beta-hydroxyacyl-ACP dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fabZ</name>
        <name evidence="10" type="synonym">fabZ3</name>
        <name evidence="10" type="ORF">PPSC2_23190</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>a (3R)-hydroxyacyl-[ACP] = a (2E)-enoyl-[ACP] + H2O</text>
            <dbReference type="Rhea" id="RHEA:13097"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9945"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78827"/>
            <dbReference type="EC" id="4.2.1.59"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the thioester dehydratase family. FabZ subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.59" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373420.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10675"/>
    <dbReference type="EnsemblBacteria" id="ADO58882">
        <property type="protein sequence ID" value="ADO58882"/>
        <property type="gene ID" value="PPSC2_23190"/>
    </dbReference>
    <dbReference type="GeneID" id="66575435"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4911"/>
    <dbReference type="eggNOG" id="COG0764">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078912_3_0_9"/>
    <dbReference type="OMA" id="HFPHEPV"/>
    <dbReference type="OrthoDB" id="1763197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008659">
        <property type="term" value="F:(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008693">
        <property type="term" value="F:3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047451">
        <property type="term" value="F:3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004317">
        <property type="term" value="F:3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00406">
        <property type="entry name" value="FabZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013114">
        <property type="entry name" value="FabA_FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010084">
        <property type="entry name" value="FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30272">
        <property type="entry name" value="PTHR30272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07977">
        <property type="entry name" value="FabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01750">
        <property type="entry name" value="fabZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="4 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="9">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="16011" checksum="FA1F00D61510EF75" modified="2011-01-11" version="1">MDKLQLDVNQIQEIIPHRPPFLLVDRIIELEEGKRAVGIKNVTMTEPHFIGHFPGYPVMPGVLITEALAQVGAVALLHLESNRGKIGFLAGLDGFRFRGQVVPGDTLTLEVEITRSKGAFGKGKATAKVGDTVVAEGEIMFALSDPPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBU7</accession>
    <name>E3EBU7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sodium:proton antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">napA</name>
        <name evidence="7" type="ORF">PPSC2_24070</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373606.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11575"/>
    <dbReference type="EnsemblBacteria" id="ADO59071">
        <property type="protein sequence ID" value="ADO59071"/>
        <property type="gene ID" value="PPSC2_24070"/>
    </dbReference>
    <dbReference type="GeneID" id="66575258"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5094"/>
    <dbReference type="eggNOG" id="COG0475">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005126_7_1_9"/>
    <dbReference type="OMA" id="TTFSHEG"/>
    <dbReference type="OrthoDB" id="941006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004771">
        <property type="entry name" value="K/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00932">
        <property type="entry name" value="2a37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="144"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="176"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="234"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="264"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="288"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="352"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="domain" description="Na_H_Exchanger" evidence="6">
        <location>
            <begin position="6"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="40634" checksum="DF7F18C9549BFF6F" modified="2011-01-11" version="1">MQFILYLLLILLFTKVAGHLSVKLGQPAVLGKLIAGIVLGPAVLGWVQNDSLIHDMSEIGVLLLMFIAGLETDLDQLRRNWKPAVAVAVGGIILPLLCGFAVGEAFGFSVHEGWFLGIVLSATSVSITVQVLKDMNKLNTREGSTILGAAVLDDVLVVVLLAVVMSIFGMGGQTSLGLLVGKKLIFFVGAILGGWFVVPWIMKILAPLKVTEAVITAAMVICFGFAYFADLMGMAGIIGAFAAGIAISQTSFKHVVEEKVEPIAYSIFVPVFFVSIGLNVSFEGVGQQLGFVVVLTLIALVTKLVGGGIGARLTGFNTRSSLAIGSGMISRGEVALIIAATGLQTGLLAQQYFTSVIIAVILTTLAAPPILKLCFSDRKTVSQIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBV0</accession>
    <name>E3EBV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">snf4</name>
        <name evidence="3" type="ORF">PPSC2_24080</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373609.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11585"/>
    <dbReference type="EnsemblBacteria" id="ADO59074">
        <property type="protein sequence ID" value="ADO59074"/>
        <property type="gene ID" value="PPSC2_24080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5097"/>
    <dbReference type="eggNOG" id="COG0477">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034180_15_3_9"/>
    <dbReference type="OMA" id="NRISAGW"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010290">
        <property type="entry name" value="TM_effector"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05977">
        <property type="entry name" value="MFS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="256"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="294"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="319"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="346"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="383"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="414"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="455" mass="47862" checksum="7478588A53B50D8A" modified="2011-01-11" version="1">MKENKELQSTLSIWRNGRFRRMFAAHTAASFGDWFDAIAIQVLVAYRWEADPMLIALIPVVMALPGLLLGSIAGTLADRVHKARLMIICDAAIALLTLAILAVPGPAWLLPLLGLRAAAGVFQMPSQQGLTRTVVASGDLFRATSLNGLVNQASKVAGPLLGAMTLAVLSPQACIILNALLRLCSGLLLWPLRGIGPTLAATDQQAVAGADAQLRKSASLTPDEADDAKMQGGPAHASRFFSQWREGWAFLWRSRMLLHTLIFGLFGLIAILMIDYQFPTLLRVLAPGNESLLGWLVSAIGAGAVGCMLVLNRLNRISAGWGLGGGYVLVGGAIAALGWAQPGTGLPVLLTIGAMLGVGNGLYIITQNYILQAKTPADMVGRVFGIQSTVIGAIMVISPLAGGVLIRIAGAGTAFVWIGMTVGILGLAGLLLQSVIWRESLANPTPSTEQNVDLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC89</accession>
    <name>E3EC89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partitioning protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">soj1</name>
        <name evidence="2" type="ORF">PPSC2_01230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368875.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0246"/>
    <dbReference type="EnsemblBacteria" id="ADO54232">
        <property type="protein sequence ID" value="ADO54232"/>
        <property type="gene ID" value="PPSC2_01230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.239"/>
    <dbReference type="eggNOG" id="COG1192">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037612_4_0_9"/>
    <dbReference type="OrthoDB" id="729012at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="5"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="32208" checksum="DC67FAD4933951CC" modified="2011-01-11" version="1">MSATCVSLINMKGGVGKTTLAFNLAWYAAYKRRMRVLVVDLDPQANASQYLMGAEAYKTYLDENRPTVFHIFEQYTPSGFDGSMGPSSLDVSTVIYPVKKWSNSSFIHLIPSRLELSWTLKNPTNKDHLLARFLTNVQNDYDLILIDCAPTESILTTAVYRASRFVVIPIKPEFLASIGLPLLVRSLESFKHSLGDQDIEIAGIVFNDTDPTLTYEEHNISRSEVRNYASKQGWHVFENEVRHSNSYPKGARNKKPIFLTDYARSNVINEFTAFGREFLERVGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECB7</accession>
    <name>E3ECB7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AraC5</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">araC5</name>
        <name evidence="1" type="ORF">PPSC2_01365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368902.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14085"/>
    <dbReference type="EnsemblBacteria" id="ADO54260">
        <property type="protein sequence ID" value="ADO54260"/>
        <property type="gene ID" value="PPSC2_01365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.270"/>
    <dbReference type="eggNOG" id="COG3533">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013148_1_0_9"/>
    <dbReference type="OMA" id="LYSGMAD"/>
    <dbReference type="OrthoDB" id="194265at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012878">
        <property type="entry name" value="Glyco_hydro_127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07944">
        <property type="entry name" value="Glyco_hydro_127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="647" mass="74177" checksum="199B2723D3449B97" modified="2011-01-11" version="1">MKTAKPVKHVIVDDSFWKKYKQVVAEEVIPYQWKALNDELPDTEPSHAIENFRIAAGESSGEYYGTVFQDSDLAKWLETVAFSLRDHPNSALEERADEVIDLLGRAQAEDGYLNTYYLLKEPDNRWTNLRDNHELYCAGHFIEAAVAYYETTGKTKFLNIMEKYVDLIQQIFGTEEGKRKGYPGHEEIELALIKLYDVTAKDQYLKLAQYFIEQRGQHPIYFVEEQEKRKHIQTEPTWNDDNNINFGLGFEYQQAHQPVREQKEAVGHAVRAVYLYIAMADLAAKTGDASLLQTCETLWDDVTNHKMYITAGIGSTVNAEAFTCHHDLPNDSMYCETCASVGLAFWANRMLRLAPDRKYADVLERALYNGTISGMDLDGKRFFYVNPLEVNPFQKSRKDQEHVKTERQKWFFCACCPPNLARMIASVEDNMYTQTEDTLYTHLYIASKVNMTLSGQEIEITQTHHYPWDADLALSIHVTEPTAFKWALRIPGWCKQAEVKVNGEVISLDHLEKGYVEIQRTWKDGDMVTLHLAMPVERIRSNPLVSMNQQQVALQRGPVVYCLEEADNGANLAGLRLPKDNPVTEEFSENLLGGIVKLTIEGYRVKGSNALYSSEPPELVPQQITAIPYYAWCNRAKGEMRVWFYES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECF9</accession>
    <name>E3ECF9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Glutamate:protein symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gltT</name>
        <name evidence="9" type="ORF">PPSC2_01570</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368944.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14265"/>
    <dbReference type="EnsemblBacteria" id="ADO54302">
        <property type="protein sequence ID" value="ADO54302"/>
        <property type="gene ID" value="PPSC2_01570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.312"/>
    <dbReference type="eggNOG" id="COG1301">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019375_7_0_9"/>
    <dbReference type="OMA" id="YLYIAVI"/>
    <dbReference type="OrthoDB" id="781228at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046942">
        <property type="term" value="P:carboxylic acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018107">
        <property type="entry name" value="Na-dicarboxylate_symporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PTHR42865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="SSF118215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00713">
        <property type="entry name" value="NA_DICARBOXYL_SYMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00714">
        <property type="entry name" value="NA_DICARBOXYL_SYMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0769">Symport</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="40"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="77"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="150"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="195"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="226"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="326"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="350"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="44690" checksum="6C291308CC036E50" modified="2011-01-11" version="1">MKKINLTMQIFIGLALGIIVGALFYGNSGVEVYLKPIGDIFIRLIKMIVVPIVISTLIIGVAGVGDMKKLGKLGGKSILYFEIVTTIAILFGLLVANLVRPGEGVDMSHLAKSDIHSYVETAEKSGHNFIDTIVHIVPTNVIQALGEGDMLAIIFFSVLFGLGVAAIGNKGKPVLNFFEGVADAMFWVTNQVMRLAPFGVFALIGTTVAKFGLASLWPLLKLVLSVYGSMLLFIVIVFGIIAKLCGTRLWTMVKILKSELLLAYSTASSESVLPKIMEKMEKFGCPKGITSFVIPIGYSFNLDGSTLYQALAAIFIAQMYGIDMPITTQITLVLVLIISSKGIAGVPGASFVVLLATLGAVNIPLEGLAFIAGIDRILDMARTVVNVLGNSLAAVVMSKWEGQYDKEKGEEYVASIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECG1</accession>
    <name>E3ECG1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypaA</name>
        <name evidence="2" type="ORF">PPSC2_01580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368946.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0320"/>
    <dbReference type="EnsemblBacteria" id="ADO54304">
        <property type="protein sequence ID" value="ADO54304"/>
        <property type="gene ID" value="PPSC2_01580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.314"/>
    <dbReference type="eggNOG" id="COG3759">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_129819_0_1_9"/>
    <dbReference type="OMA" id="LEMFLWE"/>
    <dbReference type="OrthoDB" id="1974703at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009732">
        <property type="entry name" value="DUF1304"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38446">
        <property type="entry name" value="PTHR38446"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06993">
        <property type="entry name" value="DUF1304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="12924" checksum="C06D5EA8D3DCD57B" modified="2011-01-11" version="1">MSLLSSILVGIVALEHVYILVLEMFLWTTPRAIRTFGTSKELAGVTKSLAANQGLYNGFLAAGLVWGLFYPDPVIGRQIQLFFVICVVVAAVYGALTANKSILLKQGLPAILALISLLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED32</accession>
    <name>E3ED32_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DeoR faimly transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">glcR</name>
        <name evidence="5" type="ORF">PPSC2_06345</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369931.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19290"/>
    <dbReference type="EnsemblBacteria" id="ADO55300">
        <property type="protein sequence ID" value="ADO55300"/>
        <property type="gene ID" value="PPSC2_06345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1310"/>
    <dbReference type="eggNOG" id="COG1349">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060699_2_0_9"/>
    <dbReference type="OMA" id="YKHSMVA"/>
    <dbReference type="OrthoDB" id="1629121at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014036">
        <property type="entry name" value="DeoR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018356">
        <property type="entry name" value="Tscrpt_reg_HTH_DeoR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00455">
        <property type="entry name" value="DeoRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08220">
        <property type="entry name" value="HTH_DeoR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00037">
        <property type="entry name" value="HTHLACR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00420">
        <property type="entry name" value="HTH_DEOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00894">
        <property type="entry name" value="HTH_DEOR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="4">
        <location>
            <begin position="3"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="28616" checksum="FEF7AA4BFA71E133" modified="2011-01-11" version="1">MYQEERMLKIVDYLQLHKRISVDDICEIFNVSRDTARRDLVKLEEHQKIIRTRGGALLPKLHHDPIGNYNERLLTVSEEKQVIGQLAASMVRNRDRIILDSSTTVQACAERLNVQECSVITNSINQADVLSGKDGVSIHLLGGRLQKEHRYVYGSSVIATLSHYFVDKAFIGIGGISAHGLSLIHEEDGMLKHQMMKQADQVIILADHSKFGINFPYRFADLSEVNIVITDRLPESAMLEILQHHDIEIIVPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDJ6</accession>
    <name>E3EDJ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rha family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06380</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369935.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55304">
        <property type="protein sequence ID" value="ADO55304"/>
        <property type="gene ID" value="PPSC2_06380"/>
    </dbReference>
    <dbReference type="GeneID" id="66573663"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1314"/>
    <dbReference type="eggNOG" id="ENOG50335Y4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_192101_0_0_9"/>
    <dbReference type="OMA" id="KTFCETH"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="73" mass="8520" checksum="95A1671606FDDAF5" modified="2011-01-11" version="1">MNNKMPVTSFGWAIKQRLVELRLDQKTFCETHNIPPSRLSNLIHGTRKAQRYRKQVAAILNIDDNDYKEATPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDR6</accession>
    <name>E3EDR6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_06715</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370005.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19680"/>
    <dbReference type="EnsemblBacteria" id="ADO55374">
        <property type="protein sequence ID" value="ADO55374"/>
        <property type="gene ID" value="PPSC2_06715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1382"/>
    <dbReference type="eggNOG" id="COG3610">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117642_3_0_9"/>
    <dbReference type="OMA" id="IPIEWAT"/>
    <dbReference type="OrthoDB" id="1567942at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024528">
        <property type="entry name" value="ThrE_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12821">
        <property type="entry name" value="ThrE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="51"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="115"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="ThrE_2" evidence="6">
        <location>
            <begin position="4"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF12821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="15714" checksum="D3E89A938B159C08" modified="2011-01-11" version="1">MLAQLFTSFIATAAFGILFHAPRRSLLQCGFVGMLGWLVYYSTTDSMGPVSASLLATILIGIVSQGFARLYKMPVIIFSVAGMIPLVPGGMAYNAMRQFVQQHYPQALELAMSTLMIAGAIAVGLVISEVLNQIFHNIRFKPQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE55</accession>
    <name>E3EE55_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Arabinose ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ykuC1</name>
        <name evidence="9" type="ORF">PPSC2_04875</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369611.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17770"/>
    <dbReference type="EnsemblBacteria" id="ADO54978">
        <property type="protein sequence ID" value="ADO54978"/>
        <property type="gene ID" value="PPSC2_04875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.982"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034180_16_3_9"/>
    <dbReference type="OMA" id="INEECSI"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="47"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="150"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="175"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="225"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
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            <end position="279"/>
        </location>
    </feature>
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            <begin position="291"/>
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        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="317"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="357"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="387"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="14"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="435" mass="48321" checksum="3EFC2CCAEAF62695" modified="2011-01-11" version="1">MNQPKEFSFYARRNLFIFSVTRLISELGSSIFKFALSLYILDITGSATVFSMVLGLSILPGVFVNIFAGVVIDRSNKKKVLVITEILSGIALLIFLPIFLLDSTNVMLLAVFSVILSLIQSFTFLTLNASIPNLVEREKVHSANSSYQSIGAIINVLGPILGAITYRAWGLETIVMINGITFISAGLMQLWLQFRKSDEQTVSSSYLDSVKDVFAYINKQKAIMYLLFIFVGINFMLAPLIQVVLPYVTYQELQLSAQQLSVIQGAWFVGVIAGAIVVSRRKVHQFVITKIFILFQLQAILFLTWCFPLLFPSTAGSLIQMTFIFIMILAVTGFFNSMSNVPMISYVQLYTPEHIRAGVFGVISSITMLATPLGIGLYGILLDRIHWVYLPLASGIVALVMGIMAHKNKELRNFFSQNAEPVLNSVGEKERVSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE60</accession>
    <name>E3EE60_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tellurite resistance TerB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">terB</name>
        <name evidence="2" type="ORF">PPSC2_04900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369616.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17795"/>
    <dbReference type="EnsemblBacteria" id="ADO54983">
        <property type="protein sequence ID" value="ADO54983"/>
        <property type="gene ID" value="PPSC2_04900"/>
    </dbReference>
    <dbReference type="GeneID" id="66573980"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.987"/>
    <dbReference type="eggNOG" id="COG3793">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127140_0_0_9"/>
    <dbReference type="OMA" id="RVCCAIG"/>
    <dbReference type="OrthoDB" id="1785741at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007791">
        <property type="entry name" value="DjlA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029024">
        <property type="entry name" value="TerB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05099">
        <property type="entry name" value="TerB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158682">
        <property type="entry name" value="SSF158682"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TerB" evidence="1">
        <location>
            <begin position="29"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="16025" checksum="AB8260B5EB35CDC7" modified="2011-01-11" version="1">MSTFKNWLNTTKKGLGDQVKKFKNKDFMEAVVAGCALVAFADGTISPEEKTKMAGYINISEELKVFDMGEVINRFNHYVANFEFSPEIGKQEALKAIGKLKGKPEVGRLVVGVCSAIGAADGDFDANEQRIVAEICGALGLNPSEFSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE64</accession>
    <name>E3EE64_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Tellurium resistance protein TerA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">terA</name>
        <name evidence="4" type="ORF">PPSC2_04920</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CAPAB/TerDEXZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369620.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17815"/>
    <dbReference type="EnsemblBacteria" id="ADO54987">
        <property type="protein sequence ID" value="ADO54987"/>
        <property type="gene ID" value="PPSC2_04920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.991"/>
    <dbReference type="eggNOG" id="COG2310">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4110">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047549_0_0_9"/>
    <dbReference type="OMA" id="KFRFIAQ"/>
    <dbReference type="OrthoDB" id="1437267at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06974">
        <property type="entry name" value="TerD_like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017115">
        <property type="entry name" value="Tellurite_resistance_TerA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003325">
        <property type="entry name" value="TerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02342">
        <property type="entry name" value="TerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037118">
        <property type="entry name" value="Tellurite_resistance_TerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TerD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="183"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="184"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="421" mass="46121" checksum="C6DC89B81330B85A" modified="2011-01-11" version="1">MAVIVVKGQKVDLTKTNPGLSHVNIGIGWESSAALELDTSAFLLGPGGKVSGDEDLIFYNNPTTPFITYSDGQQFGDKKQFSLDLTRIPSHIEKIAFTLTIYDADQKRQNFGQVQGGFIRFVHPVNGEVLRFNLDSGFTVETAIVIGELYRHNGEWKFNAIGAGFAGGLDALCENFGIEVENNPAPPAPGPTPPPVPRPAPTPPPAPPVPKPEPSATPVNLNLRKIELKKKGDTINLKKGSGGLGEILINLNWNQVQQSKGFFSRGSKGVDLDLGCLYEMKNGDKGVVQALGEVFGSLNRFPYIALDGDDRTGSVKTGENLRINGAKISEIRRILVFTFIYEGVTNWSQADGVVTLYQKDGPDIIVHMNEHDNRKGMCAIAMIQNVNDETFSIERLVQFYGGHREMDQAYNWGMRWTQGSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEM9</accession>
    <name>E3EEM9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glutamate decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429680.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20840"/>
    <dbReference type="EnsemblBacteria" id="ADO55716">
        <property type="protein sequence ID" value="ADO55716"/>
        <property type="gene ID" value="PPSC2_08235"/>
    </dbReference>
    <dbReference type="GeneID" id="66573358"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1731"/>
    <dbReference type="eggNOG" id="ENOG5032ZWQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_207049_0_0_9"/>
    <dbReference type="OMA" id="WTVVYIA"/>
    <dbReference type="OrthoDB" id="2081688at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="7020" checksum="6EBC0DE0BCEB85CD" modified="2011-01-11" version="1">MWTVIYIAPTARLADMIKLKLSEEGFMVQTRAISASKQQFEILVPSGEVEEIQEVLNSILRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN0</accession>
    <name>E3EEN0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta</fullName>
            <shortName evidence="13">ACCase subunit beta</shortName>
            <shortName evidence="13">Acetyl-CoA carboxylase carboxyltransferase subunit beta</shortName>
            <ecNumber evidence="13">2.1.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13 15" type="primary">accD</name>
        <name evidence="15" type="ORF">PPSC2_08240</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12 13">Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>acetyl-CoA + N(6)-carboxybiotinyl-L-lysyl-[protein] = malonyl-CoA + N(6)-biotinyl-L-lysyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:54728"/>
            <dbReference type="Rhea" id="RHEA-COMP:10505"/>
            <dbReference type="Rhea" id="RHEA-COMP:10506"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:83144"/>
            <dbReference type="ChEBI" id="CHEBI:83145"/>
            <dbReference type="EC" id="2.1.3.15"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="13">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="13">Lipid metabolism; malonyl-CoA biosynthesis; malonyl-CoA from acetyl-CoA: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the AccD/PCCB family.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.15" evidence="13"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370338.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20845"/>
    <dbReference type="EnsemblBacteria" id="ADO55717">
        <property type="protein sequence ID" value="ADO55717"/>
        <property type="gene ID" value="PPSC2_08240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1732"/>
    <dbReference type="eggNOG" id="COG0777">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015486_1_1_9"/>
    <dbReference type="OMA" id="PEGLWIK"/>
    <dbReference type="OrthoDB" id="504557at2"/>
    <dbReference type="UniPathway" id="UPA00655">
        <property type="reaction ID" value="UER00711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016743">
        <property type="term" value="F:carboxyl- or carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001295">
        <property type="term" value="P:malonyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01395">
        <property type="entry name" value="AcetylCoA_CT_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034733">
        <property type="entry name" value="AcCoA_carboxyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000438">
        <property type="entry name" value="Acetyl_CoA_COase_Trfase_b_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011762">
        <property type="entry name" value="COA_CT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041010">
        <property type="entry name" value="Znf-ACC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01039">
        <property type="entry name" value="Carboxyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17848">
        <property type="entry name" value="zf-ACC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01070">
        <property type="entry name" value="ACCCTRFRASEB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00515">
        <property type="entry name" value="accD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50980">
        <property type="entry name" value="COA_CT_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11 13" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="7 13" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 13" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="10 13" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 13" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 13" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 13" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CoA carboxyltransferase N-terminal" evidence="14">
        <location>
            <begin position="40"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="13">
        <location>
            <begin position="44"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO55717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="32799" checksum="2DFE5B8C7F100C90" modified="2011-01-11" version="1">MFKDLFQKKRKYATIPSERALSGDQADMPDRPKREIPEGLMTKCGKCGSIQYSKELEKNLKVCPVCGYHMRLNAMDRIRMVLDEDTFTEYDADMISVDPLDFPGYASKLEQQTLKAGLREAVVTGDGLIHGLPVVVAVMSFDFFTGSMGSVVGEKITRAIEQAIDKRLPLIIFSTSGGARMQESILSLMQMAKTSAALARLDEQGLLYISVITDPTTGGVSASFAMLGDIIIAEPGAVFGFAGRIVIEQTIRQKLPDDFQTSEFNLQHGQLDMVVHRKELRDTLGQLLDLHSVKGEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP0</accession>
    <name>E3EEP0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exlusion protein FxsA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytzA</name>
        <name evidence="2" type="ORF">PPSC2_08290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55727.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20895"/>
    <dbReference type="EnsemblBacteria" id="ADO55727">
        <property type="protein sequence ID" value="ADO55727"/>
        <property type="gene ID" value="PPSC2_08290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1742"/>
    <dbReference type="eggNOG" id="COG3030">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_085083_5_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007313">
        <property type="entry name" value="FxsA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35335">
        <property type="entry name" value="PTHR35335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04186">
        <property type="entry name" value="FxsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55727.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="14990" checksum="3BC2035514D012B8" modified="2015-05-27" version="2">MRKRLWLLLLLIPLAELYGFIWVSHWIGAGKTILLIILTTLIGAAMMQFEGRKVIADAKNEMNRGQMPGRKMLDGLCVFFGGSLLLIPGFITDIIGFTLVFPLTRVLYRRFLLKWLEKKMKNGSITFRRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP2</accession>
    <name>E3EEP2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Citrate synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">citZ</name>
        <name evidence="8" type="ORF">PPSC2_08300</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + H2O + oxaloacetate = citrate + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16845"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16947"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.3.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate metabolism; tricarboxylic acid cycle.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5 7">Belongs to the citrate synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370349.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20905"/>
    <dbReference type="EnsemblBacteria" id="ADO55729">
        <property type="protein sequence ID" value="ADO55729"/>
        <property type="gene ID" value="PPSC2_08300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1744"/>
    <dbReference type="eggNOG" id="COG0372">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025068_2_1_9"/>
    <dbReference type="OMA" id="TVGWCAQ"/>
    <dbReference type="OrthoDB" id="1412360at2"/>
    <dbReference type="UniPathway" id="UPA00223"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036440">
        <property type="term" value="F:citrate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011278">
        <property type="entry name" value="2-MeCitrate/Citrate_synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016142">
        <property type="entry name" value="Citrate_synth-like_lrg_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016143">
        <property type="entry name" value="Citrate_synth-like_sm_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002020">
        <property type="entry name" value="Citrate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019810">
        <property type="entry name" value="Citrate_synthase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024176">
        <property type="entry name" value="Citrate_synthase_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036969">
        <property type="entry name" value="Citrate_synthase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11739">
        <property type="entry name" value="PTHR11739"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00285">
        <property type="entry name" value="Citrate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001369">
        <property type="entry name" value="Citrate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00143">
        <property type="entry name" value="CITRTSNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48256">
        <property type="entry name" value="SSF48256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01800">
        <property type="entry name" value="cit_synth_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00480">
        <property type="entry name" value="CITRATE_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 7" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="6">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR001369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001369-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="370" mass="40789" checksum="DC76B01065D8B987" modified="2011-01-11" version="1">MTATKGLEGIVATTSSISSIVDGVLTYRGYNIDDLAVNADFEEVAYLLWFGKLPDQEQLQELRSQLSDYAAIPDEIITQLKLYPKELSTMAALRSAVSSLALYDPEADDMSRESNVTKTVKLQAQLPTIVAAIARIREGLEPIAPKKGVSIAENFLYQLTGRDPEETAIKAFNQALVLHADHELNASTFAARVTVATLSDIYSGITSAIGALKGPLHGGANEAVAKTLEEIGGLDQVDSYIQAKLDNREKIMGFGHRVYKNGDPRAKHLHKMSRELGEMNGDTTLFDMSVRIESIVTGQKGLKPNVDFYSASVYTQLGIKRDLFTPIFAMSRVSGWTAHILEQYENNRLIRPRAEYTGPMDQKYVSPELR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF69</accession>
    <name>E3EF69_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yrhO1</name>
        <name evidence="3" type="ORF">PPSC2_03110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369228.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15920"/>
    <dbReference type="EnsemblBacteria" id="ADO54589">
        <property type="protein sequence ID" value="ADO54589"/>
        <property type="gene ID" value="PPSC2_03110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.595"/>
    <dbReference type="eggNOG" id="COG1378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072493_1_1_9"/>
    <dbReference type="OMA" id="FVIDRRW"/>
    <dbReference type="OrthoDB" id="1036370at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002831">
        <property type="entry name" value="Tscrpt_reg_TrmB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01978">
        <property type="entry name" value="TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TrmB" evidence="2">
        <location>
            <begin position="8"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="109"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="29860" checksum="E99D4FC2D07222DC" modified="2011-01-11" version="1">MERLLQHLRNLGFTEMEAKVMVELSRQNAASGYEVAKRLGASRSNVYAALQRLAGQGYLRASAGEPVRYSMLPPGELTRMIEGQMRESLLAVEKEMPRTEPAKPTFYNVEGDRKVLESLTRELERAQHEIVLDLWREEAELLREALKKAESRGVRLLWSCDNGESMLGPWLPRTSGTDGQETSGRKFSFVIDRRWCMLGMRGENCPTQALITEHPVMTGLLLDHFAQDLILYELEHDMGSELSTRYGWRYESIIGKYMSAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFC0</accession>
    <name>E3EFC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gmT1</name>
        <name evidence="4" type="ORF">PPSC2_05355</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369716.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55083">
        <property type="protein sequence ID" value="ADO55083"/>
        <property type="gene ID" value="PPSC2_05355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1086"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033863_4_1_9"/>
    <dbReference type="OMA" id="PAWQSTY"/>
    <dbReference type="OrthoDB" id="1515911at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="14"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="75"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="104"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="131"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="159"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="189"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="221"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="252"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="277"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="16"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="160"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="32871" checksum="E7266D8A670C455A" modified="2011-01-11" version="1">MNKVIAHHSESNRIYYTSTILALLIWSTSFIATKAAYTTFPPLTLGLSRFIIASIVLGIVLLIKKEHVKVKPKDLATISFSGVLGITLYFSMENIGVSLTTASNAALIVASYPAITSLLEFILYKVKLSKYKICGIALAMIGVYFLTSVGESSDGKNQLIGNLILIGTGFAWAFYTFMTRKVVDKYPPVTLSFYQTVAGSIFFIPLALLEKDSWQAPTTGSFMLLMYLGVFCSVIAFLLYNYGLIKLSPSSSVSLMNLVPIFGVLFSVLLLHETITWRQIIGGLVVILGVLMSAHQTSRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFJ2</accession>
    <name>E3EFJ2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yjbO</name>
        <name evidence="6" type="ORF">PPSC2_07210</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for synthesis of pseudouridine from uracil.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a uridine in RNA = a pseudouridine in RNA</text>
            <dbReference type="Rhea" id="RHEA:48348"/>
            <dbReference type="Rhea" id="RHEA-COMP:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:12069"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RluA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370110.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20190"/>
    <dbReference type="EnsemblBacteria" id="ADO55483">
        <property type="protein sequence ID" value="ADO55483"/>
        <property type="gene ID" value="PPSC2_07210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1489"/>
    <dbReference type="eggNOG" id="COG0564">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016902_8_2_9"/>
    <dbReference type="OMA" id="PKTHVYR"/>
    <dbReference type="OrthoDB" id="1714699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120159">
        <property type="term" value="F:rRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd02869">
        <property type="entry name" value="PseudoU_synth_RluA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006225">
        <property type="entry name" value="PsdUridine_synth_RluC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006224">
        <property type="entry name" value="PsdUridine_synth_RluC/D_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00005">
        <property type="entry name" value="rluA_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01129">
        <property type="entry name" value="PSI_RLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PseudoU_synth_2" evidence="5">
        <location>
            <begin position="92"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="178"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606225-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="36701" checksum="4BC49E08DA02AEC6" modified="2011-01-11" version="1">MSLYYEPIVYMIPPEEEGMLLKTILQKRMNISRKLISKLKLTEQGIMLNGIRVYISVKVKSGDRVEIRMERERSDDILPEPIPFEILFEDEHLLVVNKAAGMVVHPTHGHYTGTLANGVVHYWQAKGELFRFRPVHRLDQETTGVLVVAKNPYVHQHISEQMIAGTVDKRYTALVHGRPQQQEGRVDGPIDRNPDNPHLRMVTPDGYPALTLYKLEEVWSGGSRIGLKLESGRTHQIRVHMTYIGCPLIGDKMYRITPNDAVQRELYDQLDARMPRQALHASELSLVHPVTGERMTFYAPLPDDMIRMQELLRAQYHPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFM9</accession>
    <name>E3EFM9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arylamine N-acetyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370147.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20360"/>
    <dbReference type="EnsemblBacteria" id="ADO55520">
        <property type="protein sequence ID" value="ADO55520"/>
        <property type="gene ID" value="PPSC2_07380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1526"/>
    <dbReference type="eggNOG" id="COG2162">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049918_1_0_9"/>
    <dbReference type="OMA" id="YCFHLNG"/>
    <dbReference type="OrthoDB" id="1687886at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016407">
        <property type="term" value="F:acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001447">
        <property type="entry name" value="Arylamine_N-AcTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11786">
        <property type="entry name" value="PTHR11786"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00797">
        <property type="entry name" value="Acetyltransf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="33313" checksum="48CAA798CD01F042" modified="2011-01-11" version="1">MYTMTKEEIKAYLNRIGIPEVQPPTLSYLVELHKAHVKHLSWQTLDIFARKPAAIGFQESVQLILHGRSGYCFHLNGAFSALLHSLGYKVSLHHAGVQPLGAEPRINSFHLGLTVNLLNEQQEDEVWIVDVGLGDMPYEPLPLLMGTYEQPPLRYKVMESEVVTNGWRLEHDSLASFVGVDFAPTVVQDLEEFRPKHHFYSRSVESPWFNLFLIRQRQALEANELRGCIWKKRGLNGLEKIELDKKSQWLEVMADVFGEPLVNYSHQERDELWKRVLAAHMEWKKIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFR0</accession>
    <name>E3EFR0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370401.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55782">
        <property type="protein sequence ID" value="ADO55782"/>
        <property type="gene ID" value="PPSC2_08555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1799"/>
    <dbReference type="eggNOG" id="ENOG5030651">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2899950_0_0_9"/>
    <dbReference type="OMA" id="QFKMNQN"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="7417" checksum="0A0EEA58513C674F" modified="2011-01-11" version="1">MFTQMDQFKMNQNKDIQQLLSEWEEAIGYKLSQDKHSIYMEGVKDEIRLILPVMHSHKYSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG48</accession>
    <name>E3EG48_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Flagellar biosynthesis protein FlhF</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Flagella-associated GTP-binding protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">flhF</name>
        <name evidence="13" type="ORF">PPSC2_09960</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GTP-binding SRP family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370692.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22430"/>
    <dbReference type="EnsemblBacteria" id="ADO56081">
        <property type="protein sequence ID" value="ADO56081"/>
        <property type="gene ID" value="PPSC2_09960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2098"/>
    <dbReference type="eggNOG" id="COG1419">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009301_11_4_9"/>
    <dbReference type="OMA" id="FFAADMR"/>
    <dbReference type="OrthoDB" id="1162441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020006">
        <property type="entry name" value="FlhF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43134:SF3">
        <property type="entry name" value="PTHR43134:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03499">
        <property type="entry name" value="FlhF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="7" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13" id="KW-0966">Cell projection</keyword>
    <keyword evidence="13" id="KW-0969">Cilium</keyword>
    <keyword evidence="13" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AAA" evidence="11">
        <location>
            <begin position="277"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="domain" description="SRP54" evidence="12">
        <location>
            <begin position="278"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="56"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="107"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO56081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="481" mass="53707" checksum="23B9A5284BF6DA95" modified="2011-01-11" version="1">MRVKRYVVDTMPEAMLQIRGDLGTDAVILSTKEVKVGGFMGMFSKKKIEVVAAVEEQQPPKPRRAERSSHQLAQASSPLMNTPEKPEKPLVPVVPRQAAPEAYRRVTQQIAGSSKEGQAELTVNTEQAASATEHLSPRSANNLETISQAFDQEILLSNLKSSSELHKRPIEASVPDKSGAEENQALLNELREMKAMMTRFSRNSSMESTWPEALQEICEHVLEQEVERDLLEYWIEQVYVRRSEHPFAPETFDWEQAFREEVTSFIQTRLDKGISQDTKIVYVAGPTGVGKTTTIAKLAAEQLFKHHRKVGFITSDTYRISAVEQLRTYATILNVPLEVVQSPGDVQRAIQRLEHCDLILMDTAGRNYRNELLVSELQSLLSPINESETYLVLSLTSKSRDMLNITGHFSKFGLGKVVFTKMDETGSCGGMFNLLHQFPMQLAYITNGQNVPDDLLHPDAEMVTNMLLGAKGSSGVNGDSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG69</accession>
    <name>E3EG69_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370868.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23155"/>
    <dbReference type="EnsemblBacteria" id="ADO56262">
        <property type="protein sequence ID" value="ADO56262"/>
        <property type="gene ID" value="PPSC2_10760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2279"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_0_0_9"/>
    <dbReference type="OMA" id="MEHEHEF"/>
    <dbReference type="OrthoDB" id="762207at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="33270" checksum="60CC9A8AA90BFA7D" modified="2011-01-11" version="1">MDDLVHSDITDLDTLVNMIKLSFSFMDSTNMIALCDQLYSHVNQKYQELQLYKACKKPIQPIHTKRPLVYYYGYSHLMKGMAFQKQGKYEAARDCIEKYAELGWFNGLDPYGEAEVEYYRHAARANLYALDILSGRSEVLQEYVQFLRDNPEELLPGLLSIVEGAARHDYPLERVLESFAEQIEDFKYFEEPVNVSYYFRFCYQLALYYIKLRQFTVALGYILQSLKLSDTLGMEHEHEFRKCTAIFEIFRSQATATQQDQYITILKGVLKDEKIDFTAAIAQSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGD8</accession>
    <name>E3EGD8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable cell division protein WhiA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">whiA</name>
        <name evidence="8" type="synonym">yvcL</name>
        <name evidence="8" type="ORF">PPSC2_00915</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in cell division and chromosome segregation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the WhiA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368810.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13905"/>
    <dbReference type="EnsemblBacteria" id="ADO54166">
        <property type="protein sequence ID" value="ADO54166"/>
        <property type="gene ID" value="PPSC2_00915"/>
    </dbReference>
    <dbReference type="GeneID" id="66574781"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.171"/>
    <dbReference type="eggNOG" id="COG1481">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053282_0_0_9"/>
    <dbReference type="OMA" id="CDAEAAW"/>
    <dbReference type="OrthoDB" id="1634356at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043937">
        <property type="term" value="P:regulation of sporulation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.28.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01420">
        <property type="entry name" value="HTH_type_WhiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027434">
        <property type="entry name" value="Homing_endonucl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018478">
        <property type="entry name" value="Sporu_reg_WhiA_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003802">
        <property type="entry name" value="Sporulation_regulator_WhiA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023054">
        <property type="entry name" value="Sporulation_regulator_WhiA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039518">
        <property type="entry name" value="WhiA_LAGLIDADG_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37307">
        <property type="entry name" value="PTHR37307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02650">
        <property type="entry name" value="HTH_WhiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14527">
        <property type="entry name" value="LAGLIDADG_WhiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10298">
        <property type="entry name" value="WhiA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55608">
        <property type="entry name" value="SSF55608"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00647">
        <property type="entry name" value="DNA_bind_WhiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 4" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WhiA_N" evidence="6">
        <location>
            <begin position="18"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="LAGLIDADG_WhiA" evidence="7">
        <location>
            <begin position="125"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="HTH_WhiA" evidence="5">
        <location>
            <begin position="220"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF10298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="35770" checksum="EDE74D207BA5121D" modified="2011-01-11" version="1">MSFAAQTKKELTMIESQPCCEKAELSALIRMLGSVQLSNKRVILDVSTENAAIARRIYSLIKKHFQLHIELLVRKKMRLKKNNVYIVRIPNGVQELLKELYIVSEGFLFTDGINRDIIRKNCCKRAYLRGAFMAGGSVNNPEGSSYHLEISSMYEEHCQALVDLANEFHLNARCIERKKGFILYIKEGEKIIELLSIIGAHQALFKFEDVRIMRDMRNSVNRIVNCETANLNKTIGAAVRQIENIKLLEREVGLETLPDKLREVAEIRLAHPDLNLKEVGEMLKGVVSKSGVNHRLRKIDEMADKIRGENGLIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGJ7</accession>
    <name>E3EGJ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fe3+-citrate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ybbB1</name>
        <name evidence="3" type="ORF">PPSC2_03320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54636.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599448.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01535"/>
    <dbReference type="EnsemblBacteria" id="ADO54636">
        <property type="protein sequence ID" value="ADO54636"/>
        <property type="gene ID" value="PPSC2_03320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.646"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028727_1_0_9"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="178"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="2">
        <location>
            <begin position="301"/>
            <end position="555"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54636.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="555" mass="63816" checksum="35B6E9C3512FC886" modified="2015-05-27" version="2">MNLAPLYIRLQHYDRFQVDQIIPANGHNEGMNDNETKLCTLLIALSHGIRLYVDNIAIDLRQGSCILVLPVQRYTMESSNKEAQLARFTFETFKVEGMTLNPVAHPPLLCGYPYNLLISQVNRVLGNEAWTSNQCCSYLSTSEMAMMQGRLQLILGLMAQFDEQVSQLQNNEKINLVQQTVQYMEQHYDEDLTVEKLANMAGMVRWQYSQKFKIMTGKKPNDYLVQLRINHAKRLLCNSTETLGKISRKIGFKDEYYFSRCFHKLTGHTPREYENIHLRTGQKTVIDSFGRKIHIPKDTTRIVTDGKFTLGELLVLAMPPIGAAISIMKDNVIYHNKLRNIHNIGHWADPDKIAQLQPELLLLSYVHPEQDLQKLDAIAPTVILNSKFRLFERLRYIAKLVERSKAAEKWITRYENKVRWVRRQLADAYVAGETATVYLKFGAKLYIMGQSGLAATLYESLGFRPSANVMHLIEQGQAWIEIQQHQMNHYAGDRNFVLASRQELQTVAHCPHIAALADLSSSKTHFVDSIWNYDDPITRGQLLEVLPYIFNKKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGL9</accession>
    <name>E3EGL9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Trehalose-6-phosphate hydrolase</fullName>
            <ecNumber evidence="3">3.2.1.93</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">treC</name>
        <name evidence="3" type="ORF">PPSC2_03425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 13 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.93" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369295.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16220"/>
    <dbReference type="CAZy" id="GH13">
        <property type="family name" value="Glycoside Hydrolase Family 13"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54658">
        <property type="protein sequence ID" value="ADO54658"/>
        <property type="gene ID" value="PPSC2_03425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.668"/>
    <dbReference type="eggNOG" id="COG0366">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006462_1_1_9"/>
    <dbReference type="OMA" id="PNGEKWA"/>
    <dbReference type="OrthoDB" id="1573900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008788">
        <property type="term" value="F:alpha,alpha-phosphotrehalase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005993">
        <property type="term" value="P:trehalose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032091">
        <property type="entry name" value="Malt_amylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045857">
        <property type="entry name" value="O16G_dom_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012769">
        <property type="entry name" value="Trehalose_TreC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16657">
        <property type="entry name" value="Malt_amylase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02403">
        <property type="entry name" value="trehalose_treC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="2">
        <location>
            <begin position="23"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="575" mass="66884" checksum="0C83CACA5619A591" modified="2011-01-11" version="1">MEAMNKALIPQDKDWWRKSVVYQVYPKSFNDTTGKGTGDIRGLTQKLDYLQGLGVDIIWLQPVYVSPQRDNGYDVADYCRINPDYGTMQDFEELSREIRARGMHLMIDIVVNHSSTEHVWFQQARLSKDSEYRDYYIWRDPAPDGGPPNNWISKFGGPAWQYDEATNQYFLTLFDKTQADLNWENPKVRQEVVHVLEFWAEKGVSGFRLDVINLISKDRQFSDDDGSTAPGDGRKYYTDGPHVHEYLHELHEKVFSLYNSVTVGEMSSTSLDHCIRYSNPDRKELSMTFNFHHLKVDYPNGQKWELMPYDFEMLKKLFSDWQIGMQQGGGWSALFFNNHDQPRAISRFLDDDEYHVESAKLLATTLHGLQGTPYIFQGEEIGMPNPQWSDIEEFRDVESLNMYGILQEKGKSAEEALDIIRERSRDNSRTPMQWDNTRNAGFTTGTPWIKVDERYPQINVQSQLEDPNSIYSHYRKLIRLRKTVQVITDGDYQRLDEAHPQVYAYQRSNEQETLVVISNFSGRDVQFRIPDSFYLSLDNQAVAAAELLIGNTQYAPQLNQVVSLTPYASYMWIVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGT9</accession>
    <name>E3EGT9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA 2',3'-cyclic phosphodiesterase</fullName>
            <shortName evidence="1">RNA 2',3'-CPDase</shortName>
            <ecNumber evidence="1">3.1.4.58</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytlP</name>
        <name evidence="2" type="ORF">PPSC2_05765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'-phosphomonoester.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 3'-end 2',3'-cyclophospho-ribonucleotide-RNA + H2O = a 3'-end 2'-phospho-ribonucleotide-RNA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:11828"/>
            <dbReference type="Rhea" id="RHEA-COMP:10464"/>
            <dbReference type="Rhea" id="RHEA-COMP:17353"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:83064"/>
            <dbReference type="ChEBI" id="CHEBI:173113"/>
            <dbReference type="EC" id="3.1.4.58"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the 2H phosphoesterase superfamily. ThpR family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.58" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369805.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18730"/>
    <dbReference type="EnsemblBacteria" id="ADO55173">
        <property type="protein sequence ID" value="ADO55173"/>
        <property type="gene ID" value="PPSC2_05765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1179"/>
    <dbReference type="eggNOG" id="COG1514">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081251_3_1_9"/>
    <dbReference type="OMA" id="DWHITLA"/>
    <dbReference type="OrthoDB" id="1696971at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004113">
        <property type="term" value="F:2',3'-cyclic-nucleotide 3'-phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008664">
        <property type="term" value="F:2'-5'-RNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01940">
        <property type="entry name" value="RNA_CPDase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009097">
        <property type="entry name" value="Cyclic_Pdiesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004175">
        <property type="entry name" value="RNA_CPDase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35561">
        <property type="entry name" value="PTHR35561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55144">
        <property type="entry name" value="SSF55144"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02258">
        <property type="entry name" value="2_5_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="short sequence motif" description="HXTX 1" evidence="1">
        <location>
            <begin position="45"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="HXTX 2" evidence="1">
        <location>
            <begin position="132"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="1">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="21851" checksum="BC4CC72482746987" modified="2011-01-11" version="1">MKDESQRLFTAIALPDEHKKKLRHWVEQDLNHLSFRKWSDFRDYHVTLQFLGDVETSVIPKLEQALVHAAAEHRPFTLGMGEAGFFGREDFPRVLWRGVTGQRESLDQLHQSILRATEPLGFKPEERPYRPHITVARSYTGGEPVSASVWQSNDRSGEPWEVGEFVLYATRMGQKPMYQIIQTFPLMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGX5</accession>
    <name>E3EGX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Teichoic acid biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">wecG</name>
        <name evidence="1" type="ORF">PPSC2_05935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369841.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18900"/>
    <dbReference type="CAZy" id="GT26">
        <property type="family name" value="Glycosyltransferase Family 26"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55209">
        <property type="protein sequence ID" value="ADO55209"/>
        <property type="gene ID" value="PPSC2_05935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1215"/>
    <dbReference type="eggNOG" id="COG1922">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063203_2_1_9"/>
    <dbReference type="OMA" id="CICNTHS"/>
    <dbReference type="OrthoDB" id="1759731at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06533">
        <property type="entry name" value="Glyco_transf_WecG_TagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004629">
        <property type="entry name" value="WecG_TagA_CpsF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34136">
        <property type="entry name" value="PTHR34136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03808">
        <property type="entry name" value="Glyco_tran_WecG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00696">
        <property type="entry name" value="wecG_tagA_cpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="31283" checksum="FD5C3B8CCC46A4AB" modified="2011-01-11" version="1">MMKQLPQYRVGRIASTDVAALTFQETVHTLEQWAVGRKDSYVCICNTHSIVTAGNQPEFHEALTQADLCTPDGMPLVWALKLYGFERQDRVDGPSLMLKLCERAPQTEVSVYFYGSTPDTLDSLKDRIGQDYPGIRIAGSFSPPFRELQPDEEKRIIEEINASGAHIIFVSLGCPKQEVWMHRNKDRIRGVMIGVGAAFDYITGKVRRPPLMIQRLGLEWLYRLICEPKRLWKRYAYNNPMYIYRFLKSYRHNKRLTLYHNRHTGRGIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH65</accession>
    <name>E3EH65_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fumarylacetoacetate hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370474.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21355"/>
    <dbReference type="EnsemblBacteria" id="ADO55856">
        <property type="protein sequence ID" value="ADO55856"/>
        <property type="gene ID" value="PPSC2_08890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1874"/>
    <dbReference type="eggNOG" id="COG0179">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028458_5_2_9"/>
    <dbReference type="OMA" id="TELCFIY"/>
    <dbReference type="OrthoDB" id="775108at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAA_hydrolase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="22697" checksum="BAA8FC5355578A34" modified="2011-01-11" version="1">MNVEIRNVYCVGRNYKLHAEELGNEVPTEPMIFLKPSHAVVPLDGAALELPQGKGDIHFETELVVAVGRNYEPGMTADACLNAFAFGIDFTLRDVQSTLKKKGHPWTAAKGFKSSAPVTPFLPLESLDVLEQQDFSLFKNGQEVQRGHVKDMIFSIQHIVEYIATQYGLGKGDIIFTGTPAGVGPTTSGDHFELYWGSEHQGSFTIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHX4</accession>
    <name>E3EHX4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hpr</name>
        <name evidence="2" type="ORF">PPSC2_11720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371071.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2495"/>
    <dbReference type="EnsemblBacteria" id="ADO56466">
        <property type="protein sequence ID" value="ADO56466"/>
        <property type="gene ID" value="PPSC2_11720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2480"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107565_0_0_9"/>
    <dbReference type="OMA" id="LTSRQHM"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="21842" checksum="CE1F6D6D022F9B2B" modified="2011-01-11" version="1">MEYSKALRELYIMQQTYATFFSVTNKLQIQGDNYFEKLTSRQYMIMLAIAHLPEDETTLVNIARKLETSKQSAQKLIVNLENKGYLITTPSKRDKRAINVEITELGKRVMLECGEKAICLMADIFNEFTTEELEVLWSLLKRIYGAHNEEYVGFEEDVNYKFEDLEGFQEAQIRALDSFILRRKHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI21</accession>
    <name>E3EI21_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Helicase SNF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">M1-841</name>
        <name evidence="6" type="ORF">PPSC2_03570</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369325.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16380"/>
    <dbReference type="EnsemblBacteria" id="ADO54689">
        <property type="protein sequence ID" value="ADO54689"/>
        <property type="gene ID" value="PPSC2_03570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.699"/>
    <dbReference type="eggNOG" id="COG0553">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4715">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000315_21_1_9"/>
    <dbReference type="OMA" id="ICCHPSM"/>
    <dbReference type="OrthoDB" id="325071at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140658">
        <property type="term" value="F:ATP-dependent chromatin remodeler activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013663">
        <property type="entry name" value="Helicase_SWF/SNF/SWI_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08455">
        <property type="entry name" value="SNF2_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04434">
        <property type="entry name" value="SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0347">Helicase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="3">
        <location>
            <begin position="53"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="4">
        <location>
            <begin position="680"/>
            <end position="843"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="5">
        <location>
            <begin position="954"/>
            <end position="1114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="111"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1121" mass="128058" checksum="FE6715BB33671981" modified="2011-01-11" version="1">MSFELTRRAIRQLCSQSAYDDGDAYYRAKKVAFTQIDHNEGVYEATVKGSGFYAVAAMIRPNGSIRAECTCSSFQTTGRYCKHIAAVLLNAYDMRRGKSVSVRSYVSRLHPGTAPDPAGSIGSDEMYTSTDDPNEHTTRKSRSSGITQGDLQLTDSMLKLFGRKRPLRSTPALLDTRAILDFQFVIRPFAYGYQKYMFGIEMKAGPKRLYIVQKIRPFLDCIDRGDSYMFTKSFSYEPELYRFRAEHDAILQQLSQVCHQERMIRETSGTYSASGSHMSGERMLLIPPAAWDRLLPLLTAAQGVYFEIHGNMSEGIPQSDLMLPLQFEFDETEATSEGYQLSIQGLDDLTIMEDYGVVIADGKLVKQKADSLRRLSELKRMVEVHHRRAVQIAPEQMESFMDKVVPGLMKLGRVHMTRAVSDRVAQHPLKAKLYLDRVRDKLLAGLEFQYGDIIINPLETDARTPGNDRILIRDGEQEQRILELMEHSSFARTDSGYFMEDEDAEYDFLYHTVPQLEKLLDVYATGAVKAKINNTLPVPRIRAEWDERTDWLEFKFDIEGIPESEIRKLLQSLEEKQRYHRLPNGALLPLETEEYKELIRFMNETGIRKSDLDAAQIRIPVTQGLYLIDPHDHVKNLTLGKTFRQLLENIRNPDHLDFPVPVTLAPILRDYQVYGFQWLKTLAHYRFGGILADDMGLGKTLQSIAFLVSVLPEIRSQQLPAMIVSPASLVYNWRNELEKFAPHIRVTIADGSPEERGRIIRDATSYDVIITSYPLLRRDAEVYSKPSFHTLILDEAQAFKNHATQTAQAVKDVQARYRFALTGTPIENTLEELWSIFDVVFPELFPGGKRAFHNLPRNVIAKRVRPFLLRRLKSDVLKELPEKIESVQVSRLLPDQKKLYTAYLAKLQHETLKHLNEEGFQKNRIKILAGLTRLRQLCCHPGLFIEGYTGSSAKFEQLLEIITECLGSGKRMLIFSQFTTMLQMVGRELSREGVPYFYLDGQTPAPERVELCSRFNEGERELFLISLKAGGTGLNLTGADTVILYDLWWNPAVEEQATNRAHRMGQKKVVQVIRLVAQGTVEDKMYELQQKKKNLIDQVIQPGQESLSALTELEIRELLMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIF4</accession>
    <name>E3EIF4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycerol-3-phosphate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ugpA1</name>
        <name evidence="8" type="ORF">PPSC2_06185</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369898.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19140"/>
    <dbReference type="EnsemblBacteria" id="ADO55267">
        <property type="protein sequence ID" value="ADO55267"/>
        <property type="gene ID" value="PPSC2_06185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1275"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_2_9"/>
    <dbReference type="OMA" id="LWYSVQS"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="135"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="237"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="294"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="98"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="321" mass="35724" checksum="DB9E14D5C9ACC51E" modified="2011-01-11" version="1">MGELNKSLGLGTRSQQRTSSKARIRTGSLKIQRLRENALAYTFLAPSLILFAVFMFYPMIKSVYLSLHSTDPAGNVADYVGFDNFAMLFSSGQFLQGIKVTLLFAVLTVPVGILLALVLAALTHSKLRGMRIFQFAFSLPMVLSVGSSAVIWKFLFHPTLGMFNYVLSLFHINPVPWLTSPDWALFSVAIMTIWMNLGFNYIILSSGLQGIPDDMYESAKMDGAGPLVTFWRISMPLLSPTIFFVTVVSIIGAFQSFAQINILTKGGPVNSTNVFVYSIYQEAFVNFRFGTGSAQAIVLFAVILVLTMIQFKWVERKVHYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIR6</accession>
    <name>E3EIR6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE2</name>
        <name evidence="2" type="ORF">PPSC2_09270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370552.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21740"/>
    <dbReference type="EnsemblBacteria" id="ADO55935">
        <property type="protein sequence ID" value="ADO55935"/>
        <property type="gene ID" value="PPSC2_09270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1953"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_406362_0_0_9"/>
    <dbReference type="OMA" id="EQFGYFT"/>
    <dbReference type="OrthoDB" id="54843at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013217">
        <property type="entry name" value="Methyltransf_12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08242">
        <property type="entry name" value="Methyltransf_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_12" evidence="1">
        <location>
            <begin position="440"/>
            <end position="550"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="702" mass="81227" checksum="751D45BE4C6E54E0" modified="2011-01-11" version="1">MLQSLKAIANYRKESDLAWDTPTWLKLLVSAEERIVNLERIRSIGELKDANPVLDYVERTLLILDGLPLSFWVKELLEDVLVWSETAKGGTVRERLRWQHEGINLFVHNIGSSQLYVRQAQAESPAYPRNSMTRILIETHGLIGQYIRGEIPFAENRLLLEITRKGWLSSEELELVLRALNECIIAGVDPALWEQVRAEVEQLIGWIAWNNAPVVWSVKERLERLRSVSIHEGEPFEQAYAELERELNVEKALAPLENRTLWYVESALQDFSLQELVKVFLLTLRDGTGQEQPTTVRHISFESLMNTMYYDYRGVKKINVYKKRMIEKYLSALSWQDITKGKRKHNPHLSVIVEHKEELPSTVFFNFVFSSAAEKLIDFCIEAEKTPLYDKAVLLLFDLFGLRRDAYDRFHNEETYLTDMNQTADFKRVILDYVTGTRILDIGPGGGVLLDLIEQERPDSKPLGLDISVNVIEALKRKKQLEHRRWDVIKGDALRLEEFVETESMDTVIFSSILHELYSYIERDGKRFNSQTVEAALQSAYCVLAPGGRIIIRDGIMTEPVEQRRRIRFLEPDGMEWLMRYAQDFAGRPIEIERIGEHEAVLPVNDAMEFLYTYTWGAEAYVHEVQEQFGYFTPSQYEECIRNTLGSQAIIRVSRHYLQEGYAEALSSRVEFMDEQGQPVPLPDSTCLIVIEKPNPRDEATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIT4</accession>
    <name>E3EIT4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YwbE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ywbE</name>
        <name evidence="1" type="ORF">PPSC2_09350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370570.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21820"/>
    <dbReference type="EnsemblBacteria" id="ADO55953">
        <property type="protein sequence ID" value="ADO55953"/>
        <property type="gene ID" value="PPSC2_09350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1970"/>
    <dbReference type="eggNOG" id="COG4895">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_182218_0_0_9"/>
    <dbReference type="OMA" id="PHGIKVM"/>
    <dbReference type="OrthoDB" id="2026211at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019240">
        <property type="entry name" value="DUF2196"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40069">
        <property type="entry name" value="PTHR40069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09962">
        <property type="entry name" value="DUF2196"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03833">
        <property type="entry name" value="TIGR03833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7394" checksum="CDEE3B9A721B363E" modified="2011-01-11" version="1">MNGQNRSDIRAGLQVDIVLKKDQPTGKLTRGTVKDILTNSPRHPHGIKVRLVDGQVGRVKHIVMNEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIX4</accession>
    <name>E3EIX4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">p20</name>
        <name evidence="2" type="ORF">PPSC2_09540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22010"/>
    <dbReference type="EnsemblBacteria" id="ADO55993">
        <property type="protein sequence ID" value="ADO55993"/>
        <property type="gene ID" value="PPSC2_09540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2011"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_3_6_9"/>
    <dbReference type="OMA" id="VYLEDHW"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="17233" checksum="F49C16D961B35211" modified="2011-01-11" version="1">MPQVTRHTAWGPNTEEDTKAYIEQVLVSQLEKPRQDYELAVCLKETGILIGGVGIHVKDTNAEMGYILNPDYQGKGYATEAARALLGFGFSTLDVHRIYATCRPENKASEKVMQQIGMQREGIMREHWYYKGEFHDSYLYSILAEEYYRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ20</accession>
    <name>E3EJ20_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370807.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56201">
        <property type="protein sequence ID" value="ADO56201"/>
        <property type="gene ID" value="PPSC2_10500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2218"/>
    <dbReference type="eggNOG" id="ENOG50307GP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2466083_0_0_9"/>
    <dbReference type="OMA" id="HLWSELL"/>
    <dbReference type="OrthoDB" id="2099441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="11607" checksum="42C16900E6962A88" modified="2011-01-11" version="1">MVLLKDSSTKEEIREQYEQIWSELLNKDEKKAEHVLKKLEYELLPTRQRILRWWGKILSPLKKRFIWIILFNVIGFFLLAYVLFIYVSLWIEDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ27</accession>
    <name>E3EJ27_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_10535</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370814.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2236"/>
    <dbReference type="EnsemblBacteria" id="ADO56208">
        <property type="protein sequence ID" value="ADO56208"/>
        <property type="gene ID" value="PPSC2_10535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2225"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079050_0_0_9"/>
    <dbReference type="OMA" id="IPSEDAY"/>
    <dbReference type="OrthoDB" id="1206229at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168476" evidence="1">
        <location>
            <begin position="29"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="51"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="113"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="304" mass="33389" checksum="AB45AC0E6A638403" modified="2011-01-11" version="1">MNKFSRAAFASAISFSVLASCVSGVSAAASKSIIVQINNKPVSGDAEPYIENGSTLVALNMIKSIPGVTINWDNTSKMVTVDNNGTKSTLVAGKKEAMVGGAKVTLSISSVMKNGRVMVPLRFIANASGSQVYWNAPDRTVYVVKPTEDILKEIQSSDISVVRHSAYSLPRIVKVNVLSGEEGDSMAYIRYFPKKQSSEFFEQHMDIVNYYRIIDTHVELLWSARLNLQQEAKNASLPFLNNKIIEQSGKMPMIPKGFIYYNYSVPGGTTFGTIDKTGKKTLLGEATEDQAKQMFFSIPEEEQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC7</accession>
    <name>E3EJC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Deacylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_11485</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371019.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23850"/>
    <dbReference type="EnsemblBacteria" id="ADO56414">
        <property type="protein sequence ID" value="ADO56414"/>
        <property type="gene ID" value="PPSC2_11485"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2428"/>
    <dbReference type="eggNOG" id="COG3608">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076896_0_0_9"/>
    <dbReference type="OMA" id="WYLDLHE"/>
    <dbReference type="OrthoDB" id="1499029at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007036">
        <property type="entry name" value="Aste_AspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04952">
        <property type="entry name" value="AstE_AspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="241" mass="27378" checksum="0A985D8B968D566F" modified="2011-01-11" version="1">MQVKRYMLGKGSSWATPYYVAIEGQKGPCAMVVAGIHGNEIASIRAAEKLVKLLNEQKLRFSHGKLIIVPIVNQEAYRKRIRGKPDLNRTFPRQKKQAATQPLSAALFKLTQKHHPEWYLDLHEANGLSQKDAKVLGQTLISNKGNPVIPMTRRIIKRMNRSIKVKDRHFNMRLHELPGSSRTAAARILGARAVTVETGWSLPEKERIHYQMKIMQHFLREAGMIKANKVYLSGKVRTVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJE1</accession>
    <name>E3EJE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dhaR3</name>
        <name evidence="3" type="ORF">PPSC2_11555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371033.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23920"/>
    <dbReference type="EnsemblBacteria" id="ADO56428">
        <property type="protein sequence ID" value="ADO56428"/>
        <property type="gene ID" value="PPSC2_11555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2443"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_28_0_9"/>
    <dbReference type="OMA" id="YDTYGTK"/>
    <dbReference type="OrthoDB" id="1204683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="21784" checksum="2D3E209DC888EFB7" modified="2011-01-11" version="1">MGRAKEFDTESVLRKAMAVFGEHGYEGTSLTILLDQLGIARQSLYDTYGTKYDLFFSAIQLYIRDKTEAVVHLLSQPGSIKDAIATIFNESVRVLTDKRLSKECFIMNSAIEQAPHHHEIKAFISENTEKLELAFYNALVRAQKEGEIHATESELLSIARFLNHARLSLTFTAKTGASTEVLRDIVRTTLSVLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJR7</accession>
    <name>E3EJR7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386079.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59665">
        <property type="protein sequence ID" value="ADO59665"/>
        <property type="gene ID" value="PPSC2_26795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5664"/>
    <dbReference type="HOGENOM" id="CLU_852164_0_0_9"/>
    <dbReference type="OrthoDB" id="433284at1239"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="38407" checksum="47EADF3A530F24CD" modified="2011-01-11" version="1">MSTTIYNGYKLPLMTLNELQAFSKQFRKKAQDKVCELVTSFLAHEIAEMVDDFQFLSIENYISKHVLYKREADKAYEQTEMEKRGYIIPHNEKVKLSWHAYPNRSIYSIAWRKAEQRYREIHATQTRDPEVDFDCKACFIPLEDKIVALFYSEQKELKQLWEDCEEVSCYGYWDNVDPDERCSESEWKKRAKDWQNALPGYEYPHENGVFYEFICGFPGRMAIPIEDVMMRIPTLEDRARRIAVERVMDRRFNEIKSSVSIEGYDGLGIYNQTRRWIHSPEGKAELDQEISLVLPFLVPLISEGHLVVTLDKLVKYKFALSTEDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJW3</accession>
    <name>E3EJW3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386125.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59711">
        <property type="protein sequence ID" value="ADO59711"/>
        <property type="gene ID" value="PPSC2_26600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5613"/>
    <dbReference type="eggNOG" id="COG1479">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1198835_0_0_9"/>
    <dbReference type="OrthoDB" id="1779628at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="26329" checksum="2D92B718B934B0B5" modified="2011-01-11" version="1">MIWIDLNGLYYDDLPEAYKRRIKGTLIQIEEYDIDDSMKFELFKRWNNGVALKPSQIRKAKMTYEMINFLASVKDLPHIQAGFTPKGLNSETQSDMVLKAMAVLLTDNNTALDNRALNKMLDENLFASESIEETQGVIDYVGDAFQILDEKTLAKSFGTSKTVSLLYVARTAKREGRSLEEFANWMNHFFVKDYSKSGFGSQSGTAKLESVRRRNEIILSHYRKHFAAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKN3</accession>
    <name>E3EKN3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385898.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59484">
        <property type="protein sequence ID" value="ADO59484"/>
        <property type="gene ID" value="PPSC2_27660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5859"/>
    <dbReference type="HOGENOM" id="CLU_1553774_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="19998" checksum="7441C008F6D780E6" modified="2011-01-11" version="1">MDDIVSQYKKGLEQLKQTKEFLIKLDPVDFELKAIMHNIDQKINKTEQTIYNFQKVPSHRCGLCDRSYDEDHPKAVGGIKVCPYCRDISNNFRSASELEKEYNLSPGTIKRDSLPKEGNEAKLQAYLDCGLVYKTGAGYVVHKIVMTQYYEGEYKRRRKRSLKEENTTTEEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKQ2</accession>
    <name>E3EKQ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385917.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0109"/>
    <dbReference type="EnsemblBacteria" id="ADO59503">
        <property type="protein sequence ID" value="ADO59503"/>
        <property type="gene ID" value="PPSC2_27575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5840"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OrthoDB" id="495395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="470" mass="55035" checksum="811CFA1A0198F618" modified="2011-01-11" version="1">MEQTPTIRTELDKYLKKEGLNLAQLGQMSGMNRGIISAIVTGNKSMSINQLDRITEAMELPEGYFYDLFIENYIIDHPPNMRRIEPFLYRCVELEKFESIRRVVATIMDNLLYSPKLFEIAENLFLQGQYPAAQILYEGVAEAERYQHSERLAVCQYRIFTIQIGEDQNRNLRAAILFEPYVERLNEINQLDALKDLANVYRSLRKWDKVDEVARKMRAKAEIQYSMKHQDKSREYDEAIRKLSRPMFVYIAYADLLCASVCEAQGDYQRALQYTYAYAELDWVLEKDEETLHWMCLFSQWAEGNTYVNKLLSGDVSVLSEYAEYIAETSTNESEKLSKLLNIIIAANQYGIEVDDVLLRFKKDIDAFTELPTSTDMYTGQVITDYYAWFGYEMAHYYLHRGKYVDGFKDLMYAMVNSHIINNETYFINCIGLFMRFQVYAAPEVQKEFSNLIEKVWLSNVEKNNTVTYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELB0</accession>
    <name>E3ELB0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Metallophos_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_28470</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallophosphoesterase superfamily. YfcE family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386356.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59942">
        <property type="protein sequence ID" value="ADO59942"/>
        <property type="gene ID" value="PPSC2_28470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6039"/>
    <dbReference type="eggNOG" id="COG2129">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1370611_0_0_9"/>
    <dbReference type="OrthoDB" id="1242748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024654">
        <property type="entry name" value="Calcineurin-like_PHP_lpxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12850">
        <property type="entry name" value="Metallophos_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos_2" evidence="2">
        <location>
            <begin position="1"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="199" mass="22827" checksum="686E632DEC3ECF3E" modified="2011-01-11" version="1">MKILILSDLQGIEYREWMRFMQLDTSLFDVVFFLGDIDHMELSAIVTKFSSKQQVGILGNHDYYGDLEAYGITNVHGRSISFMDQTIVGLEGSIKYKKERAPMFTQEEALKICEELPEANMVIAHNSPKGIHDKEDIAHEGFIGLGRYISEKRPTFVFHGHQHVNKVSRLHDTWVISVYGGIIFDTKTRDIQHVLKVLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC75</accession>
    <name>A0A0D5ZC75_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44248">
        <property type="protein sequence ID" value="AKA44248"/>
        <property type="gene ID" value="PPSC2_12655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2689"/>
    <dbReference type="HOGENOM" id="CLU_1968392_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="13794" checksum="283A3AAA50AED25C" modified="2015-05-27" version="1">MWKTMKEKAAASPSKNSGDNIISQRSGGSATVREVFSVPKGGGHVKLCLKNHSDHPVKVSLTHIDSNKLYIESLVIAPHDTVTWNSNDQGFSDGLRSGDYILHWRGGDYKVDGETWGVAGSKPETSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCH2</accession>
    <name>A0A0D5ZCH2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YolD1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yolD1</name>
        <name evidence="1" type="ORF">PPSC2_15935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324526.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3405"/>
    <dbReference type="EnsemblBacteria" id="AKA44274">
        <property type="protein sequence ID" value="AKA44274"/>
        <property type="gene ID" value="PPSC2_15935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3403"/>
    <dbReference type="HOGENOM" id="CLU_131538_2_0_9"/>
    <dbReference type="OrthoDB" id="1702505at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014962">
        <property type="entry name" value="YolD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08863">
        <property type="entry name" value="YolD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12724" checksum="5B75D1B6C1A807BD" modified="2015-05-27" version="1">MFSEGNDLWESSRIIIPEHKEAYLKLMKDRQRGGKPELDDQEIQLIEQKLIESYNTCQPITLVVFSPFDDEELTCVITSINTARREVKLFRGEDDYSWIKLEDIISASI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCJ6</accession>
    <name>A0A0D5ZCJ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040103479.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3126"/>
    <dbReference type="EnsemblBacteria" id="AKA44267">
        <property type="protein sequence ID" value="AKA44267"/>
        <property type="gene ID" value="PPSC2_14645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3124"/>
    <dbReference type="HOGENOM" id="CLU_2495002_0_0_9"/>
    <dbReference type="OrthoDB" id="2163338at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9276" checksum="EEE86EE4E53FECD8" modified="2015-05-27" version="1">MLSTLPATNSASCAILSVQSHLLTKGTDLMENYRPANLSPAQIEQLQRMEHEFAELTGEPLVLIAYASRNGRTTSSSSVHGTTTTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E472</accession>
    <name>E3E472_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_12405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371216.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00095"/>
    <dbReference type="EnsemblBacteria" id="ADO56612">
        <property type="protein sequence ID" value="ADO56612"/>
        <property type="gene ID" value="PPSC2_12405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2631"/>
    <dbReference type="eggNOG" id="COG3290">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020211_13_5_9"/>
    <dbReference type="OMA" id="RIVICFF"/>
    <dbReference type="OrthoDB" id="970245at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032834">
        <property type="entry name" value="NatK_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14501">
        <property type="entry name" value="HATPase_c_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="domain" description="HATPase_c_5" evidence="2">
        <location>
            <begin position="327"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="433" mass="50228" checksum="B71FAFB2F1E5CEE5" modified="2011-01-11" version="1">MMEYNSLFLNLCVVLVMCFQVNFYFNSVFDKSSRKPNRMMYFIIFGLLNFLYLSVYLSPTFSSILALFVIFSLAQSYTVEIKTKIIFSILYAVLITIVNFISLYILYTVDSVKVSNLSHLSSQDHLIFSKVMLLSCIIMFAVIQIIRLFAKRRTFPLHARYYILFLIVPIISIYQVNVLSVYSEKNMYYFVSIIGFISLNVFIIYIFDNVIEKFQLMHENAQLQHQMDYQDANYEKTVHSFKNMKRIIHDTHQQFLYIDECIKRNELAEASEHIKVTLNKIEGAYQRVNTGNLVIDALVTNSLNIAQANGIKVDTQLNLYSQKVNIERYDLCVALGNMLDNAIEASKKVKIADDRYILIKIHSNESALFIHILNHMENEVAHLHSQKSNPDIHGIGLTNISRICDKYGGNMIIETKNKIFNNMVLIPFYKDSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E488</accession>
    <name>E3E488_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gltR3</name>
        <name evidence="3" type="ORF">PPSC2_12490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371232.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2659"/>
    <dbReference type="EnsemblBacteria" id="ADO56628">
        <property type="protein sequence ID" value="ADO56628"/>
        <property type="gene ID" value="PPSC2_12490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2648"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="MEIESYQ"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="32759" checksum="BD67448B9592F7D3" modified="2011-01-11" version="1">MDIRDLQIFLAVANEGSITRAAEKMEYVQSSISIRIQQLEKKLKTALFRRGRQGVRLTTSGETLKSYAEKIVFLTQEAERVVADNSIPRGPLRIGSPETTAAIRLPSILTDYHKSYPEVDLALKTGTTEELIHLVLKYELDGAFVAAPVDHAELDITEVGVEELAFISGGQFPSIDQPEQLQNLTLLVFRVGCSYRRKLEDWLHLQGIIPAKIMEFGTLEGILGCIHAGLGVSLLPRSVVERATVQYNLRSQEISEEFYKTPTLFIRRKDTYETAAMSEFIRISKQRFILT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4R1</accession>
    <name>E3E4R1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Redox-sensing transcriptional repressor Rex</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">rex</name>
        <name evidence="9" type="ORF">PPSC2_14415</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the transcriptional regulatory Rex family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371638.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02065"/>
    <dbReference type="EnsemblBacteria" id="ADO57039">
        <property type="protein sequence ID" value="ADO57039"/>
        <property type="gene ID" value="PPSC2_14415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3077"/>
    <dbReference type="eggNOG" id="COG2344">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061534_1_1_9"/>
    <dbReference type="OMA" id="GKPKVGY"/>
    <dbReference type="OrthoDB" id="1872374at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051775">
        <property type="term" value="P:response to redox state"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01131">
        <property type="entry name" value="Rex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009718">
        <property type="entry name" value="Rex_DNA-bd_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022876">
        <property type="entry name" value="Tscrpt_rep_Rex"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35786">
        <property type="entry name" value="PTHR35786"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02629">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06971">
        <property type="entry name" value="Put_DNA-bind_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 7" id="KW-0520">NAD</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0678">Repressor</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CoA_binding" evidence="8">
        <location>
            <begin position="79"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="7">
        <location>
            <begin position="16"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="90"/>
            <end position="95"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="217" mass="24349" checksum="9171B7D0798817CE" modified="2011-01-11" version="1">MKSDKISEAVVRRLPVYLRYLNALHKREVATVSSQELGQRLDLNPAQIRKDLAYFGDFGRKGIGYDVSYLIEKIRHILKIDQQINVVLVGAGNLGQALSNYNAYLKDNMKIVAVFDAFPDKVGTRINTLVVQPMDELETTVKEKNIRIGIITVPDFEAQHVADRLIESGIGAILNFAPIILKAPANIRIHATDFTTDLLSLAYYLEDGKEEAQYDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E507</accession>
    <name>E3E507_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Aldehyde-alcohol dehydrogenase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">adhE</name>
        <name evidence="5" type="ORF">PPSC2_15245</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371805.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02865"/>
    <dbReference type="EnsemblBacteria" id="ADO57215">
        <property type="protein sequence ID" value="ADO57215"/>
        <property type="gene ID" value="PPSC2_15245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3254"/>
    <dbReference type="eggNOG" id="COG1012">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1454">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007207_1_0_9"/>
    <dbReference type="OMA" id="QWFKVPP"/>
    <dbReference type="OrthoDB" id="1456634at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008774">
        <property type="term" value="F:acetaldehyde dehydrogenase (acetylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006066">
        <property type="term" value="P:alcohol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015976">
        <property type="term" value="P:carbon utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08178">
        <property type="entry name" value="AAD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034789">
        <property type="entry name" value="AAD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039697">
        <property type="entry name" value="Alcohol_dehydrogenase_Fe"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012079">
        <property type="entry name" value="Bifunc_Ald-ADH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11496">
        <property type="entry name" value="PTHR11496"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000111">
        <property type="entry name" value="ALDH_ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00913">
        <property type="entry name" value="ADH_IRON_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="3">
        <location>
            <begin position="9"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="Fe-ADH" evidence="4">
        <location>
            <begin position="464"/>
            <end position="851"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR000111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="870" mass="95566" checksum="FA26A3FF8B101EB1" modified="2011-01-11" version="1">MAVKNEVIQKEQSAEQYIQTLIDRANRAQQAFMSMNQEQIDGIVQAMALAGMDKHMHLAKLAVEETGRGVYEDKITKNMFATEYIYHSIKNEKTVGVIEDNDFDSFQKIAEPVGIIMGITPVTNPTSTTMFKALIAIKTRNPIIFGFHPSAQSCSAEAARVLLEAAVKHGAPADCIQWIEAPSMDKTNVLMNHPDVALILATGGSGMVKAAYSCGKPALGVGPGNVPCFIEKTADIKQAVNDLILSKSFDNGMICASEQAVIIEEPIFEQVKKLMIANGCYFVNKEEAAKLTQGAMNVEKCAVNPAIVGQSAVKIAEMSGITVPAGTKILVAEIEGVGTKFPLSAEKLSPVLACYKVKNAEQGIQRAAEVVEFGGMGHSSAIHSQDEDVIARFANRLQTGRIIVNAPSTHGAIGDIYNTNLPSLTLGCGSYGRNSTSSNVSAVNLINVKRVAKRTVNMQWFKVPSKIYFEKNSTQYLAKMPDITRVAIITDPMMVKLGYVDRVIHYLHQRQTPVAIEVFSEVEPDPSTVTVERGTEMMRRFQPDCIIALGGGSPMDAAKGMWMFYEYPDTDFNNLKQKFMDIRKRIYKYPRLGQKAQFVAIPTTSGTGSEVTSFAVITDKNLGNTKYPLADYELTPDVAIIDPVFVYSLPKTAVADTGMDVLTHAIEAYVSVMANDYTDGLAIKAIQLVFQYLEQSALIGDKLAREKMHNASTLAGMAFANAFLGINHSLAHKWGGQYHTAHGRTNAILLPHVIRYNAKKPTKFASFPKYSHFVADERYAEIARILGLPARTTEEGVNSLIDAIRKLNKTLGIEESFQQLGFDPKDFESRVDYLADRAFEDQCTTANPKLPLVTELADVYRNAFYGRFDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E515</accession>
    <name>E3E515_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">inoDH</name>
        <name evidence="3" type="ORF">PPSC2_15275</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371813.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02895"/>
    <dbReference type="EnsemblBacteria" id="ADO57223">
        <property type="protein sequence ID" value="ADO57223"/>
        <property type="gene ID" value="PPSC2_15275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3262"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_1_4_9"/>
    <dbReference type="OMA" id="PDKPWFY"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="139"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="360" mass="39710" checksum="53484972A6B9B63A" modified="2011-01-11" version="1">MSKTLKIGIIGCGGIANGKHLPSLAKQKRAEIIAFCDIIQERAEEAAEKYGAEGSQVYSDYRQLLENKDIEVVHVCTPNDSHSEITVAALEAGKHVLCEKPMAKTAEQAREMLDAANRTGKKLSIAYQNRYRDDSLYLKQLVEQGELGEIYLGKAIALRRRAVPTWGVFLDEEKQGGGPLIDIGTHALDLTLWLMDNYKPKSVLGSTFHKLGDRKNAANAFGPWNPDEFKVEDSAFGFITMQNGATIVLESSWALNVVEFGEAKTLLCGTEGGADMQDGLRINGEKNSRLFDTKIDLDAGGVAFYSGETENEADREARLWIESILDDKELLVKPEQALVVTEILEAIYESARTGKAVYFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E549</accession>
    <name>E3E549_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptide deformylase</fullName>
            <shortName evidence="2">PDF</shortName>
            <ecNumber evidence="2">3.5.1.88</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Polypeptide deformylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">def</name>
        <name evidence="3" type="synonym">def1</name>
        <name evidence="3" type="ORF">PPSC2_15440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H2O + N-terminal N-formyl-L-methionyl-[peptide] = formate + N-terminal L-methionyl-[peptide]</text>
            <dbReference type="Rhea" id="RHEA:24420"/>
            <dbReference type="Rhea" id="RHEA-COMP:10639"/>
            <dbReference type="Rhea" id="RHEA-COMP:10640"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:49298"/>
            <dbReference type="ChEBI" id="CHEBI:64731"/>
            <dbReference type="EC" id="3.5.1.88"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="2">Binds 1 Fe(2+) ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the polypeptide deformylase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.88" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57257.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014600032.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03090"/>
    <dbReference type="EnsemblBacteria" id="ADO57257">
        <property type="protein sequence ID" value="ADO57257"/>
        <property type="gene ID" value="PPSC2_15440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3299"/>
    <dbReference type="eggNOG" id="COG0242">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061901_4_2_9"/>
    <dbReference type="OrthoDB" id="1649129at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042586">
        <property type="term" value="F:peptide deformylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00487">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.45.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00163">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023635">
        <property type="entry name" value="Peptide_deformylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036821">
        <property type="entry name" value="Peptide_deformylase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10458">
        <property type="entry name" value="PTHR10458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01327">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004749">
        <property type="entry name" value="Pep_def"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01576">
        <property type="entry name" value="PDEFORMYLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56420">
        <property type="entry name" value="SSF56420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00079">
        <property type="entry name" value="pept_deformyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57257.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="17824" checksum="51F958719728B7DE" modified="2015-05-27" version="2">MSIRIIVLEPDDVLHKVAKEVTKITPNVQKLLDDMADTMYEAEGVGLAAPQVGILKRLIVVDAGDEHGLIKMINPEIVAEEGEQLGPEGCLSIPGLNGDVRRAEKVTVKGLNREGKAITVTATGLLSRAFQHEIDHLNGVLFTDIAEKVYEVALEQPGPNRQAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E550</accession>
    <name>E3E550_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Primosomal protein N'</fullName>
            <ecNumber evidence="9">3.6.4.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ATP-dependent helicase PriA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">priA</name>
        <name evidence="12" type="ORF">PPSC2_15445</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Component of the primosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the helicase family. PriA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371848.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03095"/>
    <dbReference type="EnsemblBacteria" id="ADO57258">
        <property type="protein sequence ID" value="ADO57258"/>
        <property type="gene ID" value="PPSC2_15445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3300"/>
    <dbReference type="eggNOG" id="COG1198">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013353_3_1_9"/>
    <dbReference type="OMA" id="RCHYCGY"/>
    <dbReference type="OrthoDB" id="1132322at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006269">
        <property type="term" value="P:DNA replication, synthesis of RNA primer"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006268">
        <property type="term" value="P:DNA unwinding involved in DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00983">
        <property type="entry name" value="PriA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005259">
        <property type="entry name" value="PriA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041222">
        <property type="entry name" value="PriA_3primeBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042115">
        <property type="entry name" value="PriA_3primeBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041236">
        <property type="entry name" value="PriA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040498">
        <property type="entry name" value="PriA_CRR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17764">
        <property type="entry name" value="PriA_3primeBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18074">
        <property type="entry name" value="PriA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18319">
        <property type="entry name" value="PriA_CRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00595">
        <property type="entry name" value="priA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 9" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 9" id="KW-0639">Primosome</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="10">
        <location>
            <begin position="317"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="11">
        <location>
            <begin position="585"/>
            <end position="768"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="9">
        <location>
            <begin position="550"/>
            <end position="562"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="9">
        <location>
            <begin position="577"/>
            <end position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="858" mass="97340" checksum="F503DF8AFAAD2874" modified="2011-01-11" version="1">METGNLVAKVIVDVPAKDTDRTFDYLIPDSMKPWIEPGSRVAVPFGKRTVQAFVISVVPAEEPPKYRMRAIQELLDLVPPLSPDLVELGKWMSERYACNQIMALQVMIPTALKGKAERYISIAEQHESTNPQRSMLSNQEDEIEWALLTDDGMSDPAERQIVSFIQNKEQVPLQQLSRRFPEEAEVIKSLLRRGVLQESQVIKDKLGKKTMKAVDLAISIDEASMALEQFSAKAQRQREVLAFLLERSEFLPLPLKEVMTSLGVSAATVKALEDKGYVLQEDVEVFRDPYRGRHFKPTDPLPLTAEQQSVYERIVRQLDIREQGAYLLHGVTGSGKTEIYLQTIQRCIEQNRQAIVLVPEISLTPQMVERFKGRFGDQVAVMHSRLSGGERYDEWRKIREGRVKVAIGARSAVFAPFRELGLIIMDEEHETSYKQEETPKYHARDVAIRRAHQHGAVVILGSATPSLESYYAARSQSNDEFAPLLLEMPTRALGNTLPEVHIMDMREELRAGNRSMFSRALHNGIAERLERKEQTVLLLNRRGHSTFVMCRSCGYVAGCPDCDISLTYHQRSNNLRCHYCGYSEPVPQTCPECGSEHIRYFGTGTQRVEEELAKLFPGIRVVRMDVDTTTEKNAHEKLLKQFRDKKADVLLGTQMVAKGLDFPDVTLVGVITADSALNLPDFRAAEKTFQLLTQVAGRAGRHQLPGEVFVQSYTPEHYSVVHASRHDYASFVREELKHRRNLHYPPYCRLILVTFSHEQLPVLVRLAENYSATLQGRARQRGWFGNMDRLTSDVLDILGPVASPISRIKNRYRFQCMIKWRGNIDAIGLAQQVADEMAESAQAQKLLISLDVDPQMLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5A9</accession>
    <name>E3E5A9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372055.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3513"/>
    <dbReference type="EnsemblBacteria" id="ADO57469">
        <property type="protein sequence ID" value="ADO57469"/>
        <property type="gene ID" value="PPSC2_16440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3510"/>
    <dbReference type="eggNOG" id="ENOG5030R8N">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2344060_0_0_9"/>
    <dbReference type="OMA" id="MITQVIG"/>
    <dbReference type="OrthoDB" id="2080472at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="97" mass="11191" checksum="C0069DA3C0936189" modified="2011-01-11" version="1">MSKQILNQILDKLQIMDDRIGTLENVQKSHGEHLQQLIQIVGTTNSKIEELTEDVSILKGNQQTMLQIQQEQQKILERLSVRSISQEADIAELRRIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W9</accession>
    <name>E3E5W9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-N-acetylglucosamine 4,6-dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">capE</name>
        <name evidence="3" type="ORF">PPSC2_19830</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the polysaccharide synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372760.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07050"/>
    <dbReference type="EnsemblBacteria" id="ADO58188">
        <property type="protein sequence ID" value="ADO58188"/>
        <property type="gene ID" value="PPSC2_19830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4226"/>
    <dbReference type="eggNOG" id="COG1086">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013560_4_1_9"/>
    <dbReference type="OMA" id="TRFVCIR"/>
    <dbReference type="OrthoDB" id="662797at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd05237">
        <property type="entry name" value="UDP_invert_4-6DH_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003869">
        <property type="entry name" value="Polysac_CapD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02719">
        <property type="entry name" value="Polysacc_synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Polysacc_synt_2" evidence="2">
        <location>
            <begin position="7"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="36209" checksum="EB6E2B250DCDA744" modified="2011-01-11" version="1">MFKGKKLLVTGGTGSWGQRLTAELLKEGPTEIRIFSRGEFAQIAMQRQFQSDPRLNFMIGDIRDLQALQEACHGVDYVFHLAALKHVPVCEKQPEEAFKTNVHGTENVIRASIEQGVAKVIDVSTDKAVDPVNVYGMTKAIGERLMIRANALSERTRFVCIRGGNVLGTSGSVVPLFKRQIAEGQDLTLTSPDMTRFFLTLGEAIGLLLKASVTAIGGETLVMKMKGCNIADLAEVMKEQAGQTKLKVKEIGIRGGEKLHEVLISPYEVPHTYRYDDRYFVILPQQADKRLLSQYGGLERVSFEQYRSDDELMDRAGIAELLQGME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E655</accession>
    <name>E3E655_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371344.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2774"/>
    <dbReference type="EnsemblBacteria" id="ADO56740">
        <property type="protein sequence ID" value="ADO56740"/>
        <property type="gene ID" value="PPSC2_12995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2768"/>
    <dbReference type="HOGENOM" id="CLU_2790075_0_0_9"/>
    <dbReference type="OrthoDB" id="2177555at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="7601" checksum="F8BF6644FCDAE1C0" modified="2011-01-11" version="1">MSKLGVSLTIGIFMIIFSIIFGFKVYIAVSAAMFGLFAYLATVGYLKRNSQDDPSNDGYYEFLENARN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6B8</accession>
    <name>E3E6B8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">50S ribosomal protein L25</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">General stress protein CTC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rplY</name>
        <name evidence="6 9" type="synonym">ctc</name>
        <name evidence="9" type="ORF">PPSC2_18810</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372564.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06020"/>
    <dbReference type="EnsemblBacteria" id="ADO57987">
        <property type="protein sequence ID" value="ADO57987"/>
        <property type="gene ID" value="PPSC2_18810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4031"/>
    <dbReference type="eggNOG" id="COG1825">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075939_2_1_9"/>
    <dbReference type="OMA" id="KEVQTHY"/>
    <dbReference type="OrthoDB" id="1673077at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008097">
        <property type="term" value="F:5S rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00495">
        <property type="entry name" value="Ribosomal_L25_TL5_CTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.120.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01334">
        <property type="entry name" value="Ribosomal_L25_CTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020056">
        <property type="entry name" value="Rbsml_L25/Gln-tRNA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029751">
        <property type="entry name" value="Ribosomal_L25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_L25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020057">
        <property type="entry name" value="Ribosomal_L25_b-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037121">
        <property type="entry name" value="Ribosomal_L25_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001021">
        <property type="entry name" value="Ribosomal_L25_long"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01386">
        <property type="entry name" value="Ribosomal_L25p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14693">
        <property type="entry name" value="Ribosomal_TL5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="SSF50715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00731">
        <property type="entry name" value="bL25_bact_ctc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_TL5_C" evidence="8">
        <location>
            <begin position="103"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="194"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF14693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="22855" checksum="494B5196C56D5C35" modified="2011-01-11" version="1">MSSNGGSIQLTAQPRTEKKGSAIRGLRLKGRIPAVVYGSEIEGTPVHVDAKEFNKVVRTGRSEVFNLTVEGGETIPVIIKDYQQRDNQWLHADFLKISKNKPLRVRVSIDYQGTPVGTKTGGILQVQETEVEVEGLPSDLPSTIEVDVSALDIGDKLSASDLKLPKGVTLHVSEEELLASVIVPRAVEVENAAVEGDAAATEGAEEASENKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R9</accession>
    <name>E3E6R9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Magnesium transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">corA5</name>
        <name evidence="6" type="ORF">PPSC2_21210</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373040.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08440"/>
    <dbReference type="EnsemblBacteria" id="ADO58471">
        <property type="protein sequence ID" value="ADO58471"/>
        <property type="gene ID" value="PPSC2_21210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4508"/>
    <dbReference type="eggNOG" id="COG0598">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059920_0_0_9"/>
    <dbReference type="OMA" id="YHIRHEL"/>
    <dbReference type="OrthoDB" id="822653at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046873">
        <property type="term" value="F:metal ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045863">
        <property type="entry name" value="CorA_TM1_TM2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002523">
        <property type="entry name" value="MgTranspt_CorA/ZnTranspt_ZntB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01544">
        <property type="entry name" value="CorA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144083">
        <property type="entry name" value="SSF144083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="249"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="281"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="37235" checksum="BD699F349DB7DF2F" modified="2011-01-11" version="1">MTAFEQISTFRGGWEWWDICAADWQDSVIQHLKEKLPEAAEWLDKVEDIPSSFISVRFPDGNQPLMCGSLIYSVQEEIDSQRNCNKFYFLVLDQKLVTLNLDQNTREIMHTAERQTMLEQCEDAADGMFVLARAVLHYFHTGMDKFEINLRRLEEDMEKRNARTLMDSILNARFELLYWSNMFIPFSELVTASREAYLDKLEENRFFKQLLYRVTRMEGLFRHYEKEIDTLISIDDAISAFRGNEITKTLTIVTAVFTPATVVGAIWGMNFENLPWIKTGWGFTFVIIATLLSMAGMYGWLMMKGWTGDLLKTNKRNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6X9</accession>
    <name>E3E6X9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Iron-sulfur cluster carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ybaL</name>
        <name evidence="7" type="ORF">PPSC2_22255</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the Mrp/NBP35 ATP-binding proteins family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the MIP18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373245.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09720"/>
    <dbReference type="EnsemblBacteria" id="ADO58681">
        <property type="protein sequence ID" value="ADO58681"/>
        <property type="gene ID" value="PPSC2_22255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4719"/>
    <dbReference type="eggNOG" id="COG0489">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024839_0_0_9"/>
    <dbReference type="OMA" id="PDNHPSE"/>
    <dbReference type="OrthoDB" id="1413173at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140663">
        <property type="term" value="F:ATP-dependent FeS chaperone activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02040">
        <property type="entry name" value="Mrp_NBP35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019591">
        <property type="entry name" value="Mrp/NBP35_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000808">
        <property type="entry name" value="Mrp_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044304">
        <property type="entry name" value="NUBPL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033756">
        <property type="entry name" value="YlxH/NBP35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42961">
        <property type="entry name" value="PTHR42961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10609">
        <property type="entry name" value="ParA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01215">
        <property type="entry name" value="MRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FeS_assembly_P" evidence="6">
        <location>
            <begin position="4"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="129"/>
            <end position="136"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="368" mass="40253" checksum="9B57F13397933FB1" modified="2011-01-11" version="1">MQSREQVIELLQQVREPQTGRRLVDLHFIRDVVVKEDRVSLTAIALDSQEETRTELDREIRQTLEKAGLSHVHIRIREASESEKSAIQNGEDTEEVADPVLTKGHAVGMEEHELLNPASGVRFIAIASGKGGVGKSTVAVNLAAALARQGKRVGLIDADIYGFSVPDMIGVEDVPSVEDGIIQPVERFGIKIMSMGFFVRENNPVIWRGPMLGRMLRQFFSDVEWGKLDYMILDLPPGTGDVALDVHQMIPQSEEIIVTTPHATAAFVAARAGAMALQTDHKVIGVVENMSYYVSSTGEKDYVFGRGGGAMLADTLHTKLLAQIPLGIPDNHPSEADFSPSVYKSESATGAIYDDIAAQITRLHMESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Y5</accession>
    <name>E3E6Y5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">rplM</name>
        <name evidence="5" type="ORF">PPSC2_22280</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373251.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09745"/>
    <dbReference type="EnsemblBacteria" id="ADO58687">
        <property type="protein sequence ID" value="ADO58687"/>
        <property type="gene ID" value="PPSC2_22280"/>
    </dbReference>
    <dbReference type="GeneID" id="66575611"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4725"/>
    <dbReference type="eggNOG" id="COG0102">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082184_2_2_9"/>
    <dbReference type="OMA" id="DFVVIIN"/>
    <dbReference type="OrthoDB" id="1822215at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00392">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01366">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005822">
        <property type="entry name" value="Ribosomal_L13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005823">
        <property type="entry name" value="Ribosomal_L13_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036899">
        <property type="entry name" value="Ribosomal_L13_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11545">
        <property type="entry name" value="PTHR11545"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00572">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002181">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52161">
        <property type="entry name" value="SSF52161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01066">
        <property type="entry name" value="rplM_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16505" checksum="1F439EEF5E166F79" modified="2011-01-11" version="1">MRTTYMAKPNEVERNWHIIDAEGKTLGRLASEAAALIRGKHKPQFTPHVDTGDFVVVINAEKIVLTGKKMENKKYYRHSLHPGGLKVTVAQDMVKNKPERMLELAVHGMLPKTRQGDKMKLRLKAYRGTEHPHAAQKPEVYELRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E799</accession>
    <name>E3E799_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373490.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5015"/>
    <dbReference type="EnsemblBacteria" id="ADO58954">
        <property type="protein sequence ID" value="ADO58954"/>
        <property type="gene ID" value="PPSC2_23525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4981"/>
    <dbReference type="HOGENOM" id="CLU_1325283_0_0_9"/>
    <dbReference type="OMA" id="GIRNTRV"/>
    <dbReference type="OrthoDB" id="1167563at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="205" mass="23754" checksum="1E37B299430CA9D6" modified="2011-01-11" version="1">MNKGWMLVVNNLHYNFIMTGSLSEKHTLFAEECFTNLFDCFETFLNISGIRNTRVSVYQSKKAKHAKIRWDKQELLRIVTDNELTPLMLVIEAPSIKSSYNKGTTPEVYILLSNDPMGQSPNNCGMLVSIRQDIYERIDQTIVEDVMMQLSQWIKATKLLHSSRNFYAGSKARAIMDILPFMLEKDTPDMKYVFQSWTPYPLPHT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7M5</accession>
    <name>E3E7M5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chitooligosaccharide deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pdaA</name>
        <name evidence="3" type="ORF">PPSC2_13430</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371433.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01115"/>
    <dbReference type="EnsemblBacteria" id="ADO56830">
        <property type="protein sequence ID" value="ADO56830"/>
        <property type="gene ID" value="PPSC2_13430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2860"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021264_2_3_9"/>
    <dbReference type="OMA" id="GMEPLAW"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168687" evidence="1">
        <location>
            <begin position="24"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="2">
        <location>
            <begin position="73"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="30128" checksum="91CD7682B866E0BF" modified="2011-01-11" version="1">MRYRGVLPCLALLLAFSSFPVHADTPPNIGTPHPKEAAAATSVYQSKDRATPTLAMLRKKHADIFKMCGPHTRQIALTFDDVPDSRYTPQVLDVLHANGIKATFFIVGHRAEKHPGIIRRIIREGHAIGNHSYTHPDFRKATPERFRHQITKTERILEASIGFRPRLIRPPYGEITEPQIQWARRHGYMIVNWNVDSLDWKGLSKTQIQRNVIPATRPGSIILMHAGGGQSSNLQGTVQALPGLIHSLKAKGYKFVTVPRLLHTSERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E812</accession>
    <name>E3E812_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YtfI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytfI</name>
        <name evidence="2" type="ORF">PPSC2_14815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371721.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3165"/>
    <dbReference type="EnsemblBacteria" id="ADO57125">
        <property type="protein sequence ID" value="ADO57125"/>
        <property type="gene ID" value="PPSC2_14815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3162"/>
    <dbReference type="eggNOG" id="ENOG50330CC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097083_0_0_9"/>
    <dbReference type="OMA" id="IAKHDND"/>
    <dbReference type="OrthoDB" id="2063771at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021338">
        <property type="entry name" value="DUF2953"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11167">
        <property type="entry name" value="DUF2953"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="27205" checksum="2D469932E20A7252" modified="2011-01-11" version="1">MWKWISIATIIVIFIVLAILLSRIRLKLEIAKHDNDDRAHLEIRILYGLVKMDYDIPAILITGLKKGLLYRLDRNKNIHKTDASVDSGNIDIEKIKQFIHDIRVLLKGTQSLQRWLRHTLAHVTVSKMEWSTNISLADAAYTATSTGMLWGLKTTLIGFASSIVRMDCTPKVFVVPYWVDRLRFTTILNCEAKISLGYLIFSMLRLAFRIWRVPGGPEAWKRVISKNPENQQASSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3E822</accession>
    <name>E3E822_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">Diaminopimelate decarboxylase</fullName>
            <shortName evidence="2">DAP decarboxylase</shortName>
            <shortName evidence="2">DAPDC</shortName>
            <ecNumber evidence="2 3">4.1.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lysA</name>
        <name evidence="6" type="synonym">lysA1</name>
        <name evidence="6" type="ORF">PPSC2_14865</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>H(+) + meso-2,6-diaminoheptanedioate = CO2 + L-lysine</text>
            <dbReference type="Rhea" id="RHEA:15101"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
            <dbReference type="EC" id="4.1.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 2 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 3">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; L-lysine from DL-2,6-diaminopimelate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.20" evidence="2 3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371730.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02500"/>
    <dbReference type="EnsemblBacteria" id="ADO57135">
        <property type="protein sequence ID" value="ADO57135"/>
        <property type="gene ID" value="PPSC2_14865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3172"/>
    <dbReference type="eggNOG" id="COG0019">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026444_0_1_9"/>
    <dbReference type="OMA" id="QFTVCEY"/>
    <dbReference type="OrthoDB" id="861683at2"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008836">
        <property type="term" value="F:diaminopimelate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06828">
        <property type="entry name" value="PLPDE_III_DapDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02120">
        <property type="entry name" value="LysA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002986">
        <property type="entry name" value="DAP_deCOOHase_LysA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022643">
        <property type="entry name" value="De-COase2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022644">
        <property type="entry name" value="De-COase2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000183">
        <property type="entry name" value="Orn/DAP/Arg_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02784">
        <property type="entry name" value="Orn_Arg_deC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00278">
        <property type="entry name" value="Orn_DAP_Arg_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01181">
        <property type="entry name" value="DAPDCRBXLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01179">
        <property type="entry name" value="ODADCRBXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="SSF50621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01048">
        <property type="entry name" value="lysA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 3" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="2 3" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn_Arg_deC_N" evidence="5">
        <location>
            <begin position="41"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="Orn_DAP_Arg_deC" evidence="4">
        <location>
            <begin position="298"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="290"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="293"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="330"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="334"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="362"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="390"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="455" mass="50264" checksum="838B6375806EED0C" modified="2011-01-11" version="1">MYLHGSSKINSNGHLEIGGCDTTLLKERFGTPLYIVDEQLVRRRCREFIEAFRETGLKFQVAYASKAFCVMAMCALAAEEGMSLDVVSSGELFTALQAGFPAERIHFHGNNKTPEEIEMALEAQIGCFVVDSKMELHLLQALASEKGQQVNILLRVTPGVEAHTHEYMATGQEDSKFGFDIANGTARQAVEQAIKLDHLNLLGVHSHIGSQIFEVNGFQMAAERVAVFCREIKEQLQYSFKVINLGGGFGIRYTEEDTPLKLSTYVQAIGEAVKTHFSGLYDELPEIWIEPGRSIVGDSGTTLYTVGSIKDIPQVRKYVSVDGGMTDNPRPALYQAKYEAMLANRAQDANEETVSIAGKCCESGDMLIWDVELPRPNSGDLLAVASTGAYNYSMASNYNRIRRPAVVFVNNGEAELVVRRETYEDIVRNDVLPQRLVRDQASSVVQPNAKITVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E856</accession>
    <name>E3E856_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Maue4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">maue4</name>
        <name evidence="1" type="ORF">PPSC2_15025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371762.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57169">
        <property type="protein sequence ID" value="ADO57169"/>
        <property type="gene ID" value="PPSC2_15025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3206"/>
    <dbReference type="HOGENOM" id="CLU_764711_0_0_9"/>
    <dbReference type="OrthoDB" id="1087304at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="359" mass="38537" checksum="D1F65B8961D71561" modified="2011-01-11" version="1">MMRVKISIILLVIVWFFTTGISDLQAKLDRGIKNTVTSNMFGASGDGTDQTKAIQSALDYLERVGGGKLILGKGTYLLSIAKSIHSKACIVIPAGVIIEGSGMGVTIIKRISSERKQNGVLLVNKGYDTKGGYKAAGNIVLRNFTITDGDVTSKPRTYGDLIALGHANNVLIERVQSLNHDQHFVDICGSRNITVRDSISNNLQDTYGTATIQVDRAKNLGIWGLLLDGTNPKNVTIENNKINSMSELVLQLGHDQSIAGDIRVVKNAINCLNKARAQIAIGKDEDTSILTANIKDNQIKLNNANSVGVNLVANTANRLENISIAGNTITGKMRSATIVGNSVASAGFEDILYSHYVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8A4</accession>
    <name>E3E8A4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371883.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03280"/>
    <dbReference type="EnsemblBacteria" id="ADO57296">
        <property type="protein sequence ID" value="ADO57296"/>
        <property type="gene ID" value="PPSC2_15630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3337"/>
    <dbReference type="eggNOG" id="ENOG503396S">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147364_0_0_9"/>
    <dbReference type="OMA" id="VEILHVP"/>
    <dbReference type="OrthoDB" id="2021496at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="17029" checksum="2D8E6D4D0EA55F54" modified="2011-01-11" version="1">MQKQCQCGEPMGLELRKVIYASKVEILHVPVFSCPSCFSSEVLQHVTKDIKELLQSLGSKPAPRRISFARNNELAEIIRKLVLEEADNPNVDWQSALEERMELRINLLLDLYRYARSLGDEDWMNDVEKRLVQLSGFTSKSVFTNTKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8F9</accession>
    <name>E3E8F9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase</fullName>
            <ecNumber evidence="7 8">6.3.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">D-alanyl-D-alanine-adding enzyme</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 12" type="primary">murF</name>
        <name evidence="12" type="ORF">PPSC2_16625</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>ATP + D-alanyl-D-alanine + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine</text>
            <dbReference type="Rhea" id="RHEA:28374"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57822"/>
            <dbReference type="ChEBI" id="CHEBI:61386"/>
            <dbReference type="ChEBI" id="CHEBI:83905"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7 8">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MurCDEF family. MurF subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.10" evidence="7 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372093.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03960"/>
    <dbReference type="EnsemblBacteria" id="ADO57508">
        <property type="protein sequence ID" value="ADO57508"/>
        <property type="gene ID" value="PPSC2_16625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3548"/>
    <dbReference type="eggNOG" id="COG0770">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031507_1_0_9"/>
    <dbReference type="OMA" id="VEMGANH"/>
    <dbReference type="OrthoDB" id="1861122at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047480">
        <property type="term" value="F:UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008766">
        <property type="term" value="F:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02019">
        <property type="entry name" value="MurF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000713">
        <property type="entry name" value="Mur_ligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035911">
        <property type="entry name" value="MurE/MurF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005863">
        <property type="entry name" value="UDP-N-AcMur_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01225">
        <property type="entry name" value="Mur_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63418">
        <property type="entry name" value="SSF63418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01143">
        <property type="entry name" value="murF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 7 8" id="KW-0132">Cell division</keyword>
    <keyword evidence="3 7 8" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7 8" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 12" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7 8" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase" evidence="9">
        <location>
            <begin position="26"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_M" evidence="11">
        <location>
            <begin position="110"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="10">
        <location>
            <begin position="323"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="112"/>
            <end position="118"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="467" mass="50181" checksum="4A57C5DA78909D41" modified="2011-01-11" version="1">MKRTIGQIASMCGGTLHAEADAERMVEGVFTDSRRPQSLGLFVPLVGERFDGHHYVQQIVSERGATAYLWQKDHGAPPTVNAIEVEDTLEALQHLAAAYLRETGVSVVGITGSNGKTTTKDIVNALLGTTFKVHKTEGNYNNHIGLPLTVLSMPQDTDILVLEMGMSGRGEIRLLANIAQPDVAVITNIGESHLLQLGSRTEIARAKLEIASGIKPGGLLIYNGDEPLLPQVLAEPETVKPEGLELFTFGLAADNDDYPTEITSDGEGSLFITAQSGQEAFRLPLLGQHNVVNGLAALAVARHFNVDADHIRKGLSSLKLTGMRIEVVKCSDGLTVLNDAYNASPASMKAAIQTLSAYKTGGRKIAVLGDMLELGAEEKQFHEEIGRFAAKHNIEALFTYGALGASIAQGAQGTMPTANVHAYTDKQKLIQHLRSYLHADDIVLVKASRGMRLEEIVDALKNGPLQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8G7</accession>
    <name>E3E8G7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Putative cysteine ligase BshC</fullName>
            <ecNumber evidence="1">6.-.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yllA</name>
        <name evidence="1" type="synonym">bshC</name>
        <name evidence="2" type="ORF">PPSC2_16665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the BshC family.</text>
    </comment>
    <dbReference type="EC" id="6.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372100.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04000"/>
    <dbReference type="EnsemblBacteria" id="ADO57516">
        <property type="protein sequence ID" value="ADO57516"/>
        <property type="gene ID" value="PPSC2_16665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3556"/>
    <dbReference type="eggNOG" id="COG4365">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022249_1_0_9"/>
    <dbReference type="OMA" id="TTGHQLN"/>
    <dbReference type="OrthoDB" id="295429at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01867">
        <property type="entry name" value="BshC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011199">
        <property type="entry name" value="Bacillithiol_biosynth_BshC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10079">
        <property type="entry name" value="BshC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF012535">
        <property type="entry name" value="UCP012535"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03998">
        <property type="entry name" value="thiol_BshC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="543" mass="62166" checksum="941A3D5722835B2F" modified="2011-01-11" version="1">MKIVPETLRGGSALAEDYIQGTGRASDLYEYDILHADAYAQRAKWLDKTEHLRLNRKDVVACLRIYNEQHNSHEAVHASLDRLESPDALVVVGGQQSGLFTGPMLVIYKAATIIKAAREAEERLGRPVIPIFWIAGEDHDWDEVNHTYVMAKDPQAVKIKLNKQPEHRSSVSAIKVDTVEWKQAMADIEQSLPDSEHKTDIMRMIEQGLTESYGLSEAFARLMGRLFGAYGLVLMDSADPLLRKLEASVFRRLVQHNDELETAYKTTATRIVDYGYHLQADVHEGGANLFYIHEEERLLLFKKARLFTDRRGIVAFTADELLEEIDRHPERFSNNVLTRPLMQDSLFPVLASVLGLGEIAYWAITRDAFGVLGMQMPILLPRMSFTLMEPGVEKHMLKYELTFGQVRDGLEERKKQWIATQDQLGMQDQFSEAKDAFIRMYKPLIQQTGMIEKGLLQLGETNCEKILGQIDYLEAKVQEALLRQNGTALRHWDHIEWSLFPFGQPQERAYTIYHFLNRYGLDLMDMIMNVPLDLSGTHRVIYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8R8</accession>
    <name>E3E8R8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">blt5</name>
        <name evidence="9" type="ORF">PPSC2_17875</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57778.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324606.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05215"/>
    <dbReference type="EnsemblBacteria" id="ADO57778">
        <property type="protein sequence ID" value="ADO57778"/>
        <property type="gene ID" value="PPSC2_17875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3819"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_11_9"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="99"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="142"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="171"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="213"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="247"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="278"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="302"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="337"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="365"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="4"/>
            <end position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57778.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="400" mass="42333" checksum="70D3CCF5836C869A" modified="2015-05-27" version="2">MNRIKGSIFFSVFVAMLGLMLIAPIMPPLIRELGLRESHSGLIISLGSITMALMAPVWGNLSDAKGRKPVILLGFIGMCVSCLLFTLTLFAGLNGWLSGGLLLVLLIVTRGLIGGFIPAVLSSSQAYMGDVTEGEERGSGMAIISAANGLGLVFGPAIAGAFTLIGLLWPLYFGIVIAAVAFVVSLLAIPAAQPVIQQKPARINPLQPGLRMYLFAGLVTMISIVTIQVIGGFYFQDQLGLTSEETARVVSFGLMFSGAAMLIVQIIQMKWLKWKPKLMILLGSLFLIAGMALFLISASLAVYYAAFFMFGIGTGLLMPGFMAGASLSVSQEQQGGAAGLVAAVQGISAIIAPILTTTLYRVDKYIPFMLIAVLVAVMAVIMLVVRKRNGNSEPVSHKAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8S1</accession>
    <name>E3E8S1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">S-layer protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_17890</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372360.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3826"/>
    <dbReference type="EnsemblBacteria" id="ADO57780">
        <property type="protein sequence ID" value="ADO57780"/>
        <property type="gene ID" value="PPSC2_17890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3822"/>
    <dbReference type="eggNOG" id="COG1361">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3391">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038571_0_0_9"/>
    <dbReference type="OMA" id="ANAGWIT"/>
    <dbReference type="OrthoDB" id="34792at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032109">
        <property type="entry name" value="Big_3_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16640">
        <property type="entry name" value="Big_3_5"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168258" evidence="2">
        <location>
            <begin position="27"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="311"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="371"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="435"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="263"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="263"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="298"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="531" mass="56989" checksum="F1BE6129CE3346DD" modified="2011-01-11" version="1">MSKFKSFCLTYLAVIVLFGTWTWSFSESTVYATSSPAPSVTDAVYATETTVTSWTNPSKQGQSVTFSIKTISTPQITKDLTGSVILMDGTDILDTLTMRPNGIANGYATATYTTSDLSVGSHPITAIYSGDARFAPSTSEPYVQVVNASTPTTTPSLRPTVTTVLSSPNPSSHGQEVRFSVRTTSNPQTSGDLTGTVILMDGTNILGTLTMEPVGISNGYANAYYTTSNLSVGSHPITAIYSGDVRFAPSTSEAYIQVVNGDAGTGGTGSTSGTGATTGNDSSSSNKKDKKDNADSSDSSFSSETTTSSSPSVSTTDVPTPEIMPVEQSEVAHEKYITGYQDGTFRPDQSITRAETAAMMARIMKLETKEGSTTYKDVPNMYWAKDSIIALTTQHLMNGYADGTFRPEQPITRAEMAAILASWKQLKGTQTAASPYTDIEKHWARDSIVALANAGWITGYNDNSFQPNKYITRVETVTILNTILKRGPLEGTIQATWKDVPVDYWAFKNIEEASRTHTSTINSEGTETFVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9C7</accession>
    <name>E3E9C7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371986.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57400">
        <property type="protein sequence ID" value="ADO57400"/>
        <property type="gene ID" value="PPSC2_16115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3442"/>
    <dbReference type="HOGENOM" id="CLU_2827135_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="66" mass="7389" checksum="A8C9F00B306CA0A0" modified="2011-01-11" version="1">MPEDSGHGKVFGVSITPNDIFLEEDGTVQIRNKELSNKIRQLQTKTVENLMSTSTRGDTNIFSICF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9E3</accession>
    <name>E3E9E3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA repair protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sbcC</name>
        <name evidence="3" type="ORF">PPSC2_16920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372156.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04255"/>
    <dbReference type="EnsemblBacteria" id="ADO57574">
        <property type="protein sequence ID" value="ADO57574"/>
        <property type="gene ID" value="PPSC2_16920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3613"/>
    <dbReference type="eggNOG" id="COG0419">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004785_1_2_9"/>
    <dbReference type="OMA" id="HACPVCE"/>
    <dbReference type="OrthoDB" id="1143316at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038729">
        <property type="entry name" value="Rad50/SbcC_AAA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13476">
        <property type="entry name" value="AAA_23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_23" evidence="2">
        <location>
            <begin position="6"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="214"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="403"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="916"/>
            <end position="950"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1129" mass="126578" checksum="099E591A1809E36F" modified="2011-01-11" version="1">MKPILLKLAGLQSYRESQEIRFDDLTETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAVNGTQGIMNHAEDTLAVAFTFELMSAQGPRRYRVERRFKRAGGVSVNNTLSRFIAYTEDGEEVLADKVQDVTRCVEEYIGLKMDDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLEKYGDQLTQKLSRRVKDNDIALKSLEAEQQGLGDASAEALELVKLRLKEAIDHAEASRRELERVSREAEALNKTRELVIELRQRVNELEEMARQEPGIALLERKLRQVSAAEALLPALTDWKEAVVEAEKRQKNAEQMAVLAASAAEAALVSVQADEQARQALSAEEPKLLLRIDQLEQALQLERDTEVLRTERERLAVELAHSEQTLAEHAAGLVKEQELQTRGLKRQQELQQELKQNEVRADERRMLQEAVQRLQQLETANEQWREAEQEYSTQEKRLALADERLKLMEQETQETEARRSILAAQVAEGIEALLALEAEITADVSALAAEEEQLRHELRAEELGRLAQHLAAELREGEPCAVCGSLHHPAPAAVAAHGADSSAPDELHRLRLGLQELRLTLRQQLHEQRSLLAQPAAADSGAAATGEPFTPAAAMPRGVAVWAERCTALERAAGELAARAHTLPAEAQALREADAAGQQRRIRAAAEQEAAVAALAQARSKREACTTRSEGLRAEWATQLPDVGPDQAAERYRAMQERDRRAEELRSRLEMSVTFLEEKAARVQQIQQSIIEEDKIIIARRTGLQSKDDLLREKQEQLRKWVGEGQAASLLEEATSRLLGLKNGAEAAARRRTEAEERKQQAVHASLIARQASDSAEERRQTAESRWGIRLEASSFATEAEVMECCLGPEEAARYEREVSLHREREKELSSRLKHVEEQLNGATVTEEQWETTTARLRDCRARDEEALQNRAKAERDLEDLQRRHVRWMELESNRLHLRSEAEKMSKLQSVFRGNAFVEYIAEEQLMQVSQSASRRLRFLTKQRYALEVDSSGGFVISDDANGGVKRPVSTLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLDPELLDTVITSLEKLHHDQLSVGVISHVPELRARLPRKLVVLPAEQTGGGSRVVMETF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9L3</accession>
    <name>E3E9L3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372225.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57644">
        <property type="protein sequence ID" value="ADO57644"/>
        <property type="gene ID" value="PPSC2_17245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3683"/>
    <dbReference type="eggNOG" id="ENOG503079R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2070226_0_0_9"/>
    <dbReference type="OrthoDB" id="1942114at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="14239" checksum="7FC340E005A019E6" modified="2011-01-11" version="1">MKIYTYYLANGVFPLDWEVCFSTVEEYKTQLFEKYTASQESNDFVIGGFHVLTDKIDAILNYALKDFQKEFPHNYELRCPAMIFPLPRGDESNGAEFAIILKRDEDGDTLVYSPLPLSYLEKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9T7</accession>
    <name>E3E9T7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADH dehydrogenase subunit 6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372456.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3925"/>
    <dbReference type="EnsemblBacteria" id="ADO57877">
        <property type="protein sequence ID" value="ADO57877"/>
        <property type="gene ID" value="PPSC2_18330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3922"/>
    <dbReference type="eggNOG" id="ENOG5032WWB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111025_0_0_9"/>
    <dbReference type="OMA" id="MIRTNET"/>
    <dbReference type="OrthoDB" id="1808992at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043857">
        <property type="entry name" value="DUF5819"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19136">
        <property type="entry name" value="DUF5819"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="227" mass="26471" checksum="1DCB6593DD9B8FE9" modified="2011-01-11" version="1">MKKKSEACILNATLFSLSLFLMVHFFFILLHAGPLNPVSVSLKSVTDNYVGRFFQQNWHLFAPQPMTQNLKLYVRVKYKEEGSTKTVLSNWYDVTEPMIRTNETTVFSPYNRMLRIGSGYIHQLYIGGKDDLTYKLMDKISRKENLSKEINASLEKDSDQVEQIIYRYASAFAKREFLKHEITDVQFMTSISDAIPYSKRNDLHFKVKEENVVYDWKGVVKDVVELP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9W7</accession>
    <name>E3E9W7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">dTTP/UTP pyrophosphatase</fullName>
            <shortName evidence="2">dTTPase/UTPase</shortName>
            <ecNumber evidence="2">3.6.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Nucleoside triphosphate pyrophosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Nucleotide pyrophosphatase</fullName>
            <shortName evidence="2">Nucleotide PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">maf</name>
        <name evidence="3" type="ORF">PPSC2_19410</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H2O + UTP = diphosphate + H(+) + UMP</text>
            <dbReference type="Rhea" id="RHEA:29395"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="EC" id="3.6.1.9"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>dTTP + H2O = diphosphate + dTMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:28534"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37568"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="EC" id="3.6.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Maf family. YhdE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.9" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372673.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06610"/>
    <dbReference type="EnsemblBacteria" id="ADO58100">
        <property type="protein sequence ID" value="ADO58100"/>
        <property type="gene ID" value="PPSC2_19410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4141"/>
    <dbReference type="eggNOG" id="COG0424">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040416_0_0_9"/>
    <dbReference type="OMA" id="RIDGDFY"/>
    <dbReference type="OrthoDB" id="1469203at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036218">
        <property type="term" value="F:dTTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035529">
        <property type="term" value="F:NADH pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036221">
        <property type="term" value="F:UTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009117">
        <property type="term" value="P:nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00555">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00528">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003697">
        <property type="entry name" value="Maf-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43213">
        <property type="entry name" value="PTHR43213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02545">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006305">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00172">
        <property type="entry name" value="maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="2">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="2">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="2">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="202" mass="21810" checksum="FD8CD1F5253B6EC1" modified="2011-01-11" version="1">MDGKITPRIILASTSPRRKELLAYLRLPFEVVPSHADESTPESWTPQQIVETLAARKAEAVVRTAAQSEEAGLVIGSDTIVVLEDSVLGKPADHADAVRMLTALQGRTHRVYTGVACIHTGTGKMLVRHRQTEVTMKPLNQEQIVAYVNTGEPSDKAGSYGIQGMGATLVESIQGCYFNVVGLPLSLLSDMLSDFGVNVLRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="79" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9X6</accession>
    <name>E3E9X6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Glutamate-1-semialdehyde 2,1-aminomutase</fullName>
            <shortName evidence="7">GSA</shortName>
            <ecNumber evidence="7">5.4.3.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Glutamate-1-semialdehyde aminotransferase</fullName>
            <shortName evidence="7">GSA-AT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">hemL</name>
        <name evidence="9" type="ORF">PPSC2_19450</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>(S)-4-amino-5-oxopentanoate = 5-aminolevulinate</text>
            <dbReference type="Rhea" id="RHEA:14265"/>
            <dbReference type="ChEBI" id="CHEBI:57501"/>
            <dbReference type="ChEBI" id="CHEBI:356416"/>
            <dbReference type="EC" id="5.4.3.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 7">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; 5-aminolevulinate from L-glutamyl-tRNA(Glu): step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.4.3.8" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372682.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06650"/>
    <dbReference type="EnsemblBacteria" id="ADO58109">
        <property type="protein sequence ID" value="ADO58109"/>
        <property type="gene ID" value="PPSC2_19450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4149"/>
    <dbReference type="eggNOG" id="COG0001">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016922_1_5_9"/>
    <dbReference type="OMA" id="WGPLIFG"/>
    <dbReference type="OrthoDB" id="493793at2"/>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00317"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042286">
        <property type="term" value="F:glutamate-1-semialdehyde 2,1-aminomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00375">
        <property type="entry name" value="HemL_aminotrans_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004639">
        <property type="entry name" value="4pyrrol_synth_GluAld_NH2Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00713">
        <property type="entry name" value="hemL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 7" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="4 7 8" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="7">
        <location>
            <position position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="434" mass="46833" checksum="EF05D8E19AE8842E" modified="2011-01-11" version="1">MIDEQRTVRKDTRSKAAFDEAKQYIPGGVNSPVRAFKSVGITPVYIDRGEGSRVYDIDGQSYLDYVCSWGPLIMGHAHPEVVKALQAAVVKGTSFGAPTLAETEMAKLVCERVPSMDIVRMVNSGTEATMSAIRLARGFTKRSKILKFEGSYHGHADSLLIKAGSGVATLGLPDSPGVPEVVATHTITVPYNDLASVKLAFEKFGEEIAAIIVEPVAGNMGVVPPQPGFLEGLREVTQQHGSLLIFDEVMTGFRVGLHSAQGRFGVTPDLTCLGKVIGGGLPVGAYGGRRDILEQIAPSGPIYQAGTLSGNPLAMAAGYSTLKLLTSEIYDRLEERAARLQAGFERNARELGIPVTINRVGSMVCPFFTDEKVVNFDTAKTSNQDHFRRYFTEMVNEGVSVAPSQFEGMFVSGVHTVEDIDATIEANYRALKRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Y1</accession>
    <name>E3E9Y1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ccsA</name>
        <name evidence="7" type="ORF">PPSC2_19475</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372687.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06675"/>
    <dbReference type="EnsemblBacteria" id="ADO58114">
        <property type="protein sequence ID" value="ADO58114"/>
        <property type="gene ID" value="PPSC2_19475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4154"/>
    <dbReference type="eggNOG" id="COG0755">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049710_4_0_9"/>
    <dbReference type="OMA" id="VMLVNIF"/>
    <dbReference type="OrthoDB" id="955123at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002541">
        <property type="entry name" value="Cyt_c_assembly"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045062">
        <property type="entry name" value="Cyt_c_biogenesis_CcsA/CcmC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30071">
        <property type="entry name" value="PTHR30071"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01578">
        <property type="entry name" value="Cytochrom_C_asm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="64"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="93"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="219"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="251"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrom_C_asm" evidence="6">
        <location>
            <begin position="68"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31344" checksum="FA6390389F50F7BA" modified="2011-01-11" version="1">MASGMLIYDSMIYVFALSLLFVFSDGIRRNANAKRTGTGLLLVVVVLQLVFMGMRTWNEGHLPIFVTYDFLFLFSFILVLISLFLSRYQRSEFAVLLLNIISFAVLVLNNIWMEPIDNPLGNWHTVHGLLLIHIALANLGFVAMTVAAVFSGLYLFLHRKLKVKKWNDTIKRLPSLEMMDRYTHMALLIGTPLLGVSIVVAVISIIAEERWRLLLDTKVLMTAIALCVYIVFLVSKRLNQRSGLVMAKWSLVGYTLLILNFLLNSWSVFHQWTGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z2</accession>
    <name>E3E9Z2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_19530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372697.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06730"/>
    <dbReference type="EnsemblBacteria" id="ADO58125">
        <property type="protein sequence ID" value="ADO58125"/>
        <property type="gene ID" value="PPSC2_19530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4165"/>
    <dbReference type="eggNOG" id="ENOG5031WZJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_920841_0_0_9"/>
    <dbReference type="OMA" id="FAQELWS"/>
    <dbReference type="OrthoDB" id="1794365at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="36204" checksum="527B8A66E19FED5B" modified="2011-01-11" version="1">MKIKDSKVTTKENNIVLFPKTLDYYQIQLTVMLENERYGEAMAMLRFLMQCQGQEQKQYDEWNALLQWLEAAFPQYADSGTATDNVEEDEVSEVELARRHARFKQEQDAGYGNKLLQMAMDQPLSEQTILALEQLSYLELPEIDDALLRWITEREIHPLLQFRVLQTMRRRGMEGTIEIRRGDEETEIDIETVPLQPDEFPEAIMRILERVADQTEVHEPTLFYFAQELWSQFVMAVYGTKDYRSMLVEEDGMPDIWAAALHQTVSESLNGNNNEEETRAIYGITDALRFRFEQAYRSMRLFVAAGMNTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z3</accession>
    <name>E3E9Z3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Exodeoxyribonuclease III</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">exoA</name>
        <name evidence="4" type="ORF">PPSC2_19540</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA repair enzymes AP/ExoA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372698.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06740"/>
    <dbReference type="EnsemblBacteria" id="ADO58126">
        <property type="protein sequence ID" value="ADO58126"/>
        <property type="gene ID" value="PPSC2_19540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4166"/>
    <dbReference type="eggNOG" id="COG0708">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027539_1_3_9"/>
    <dbReference type="OMA" id="WWSYRGR"/>
    <dbReference type="OrthoDB" id="1893707at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008853">
        <property type="term" value="F:exodeoxyribonuclease III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004808">
        <property type="entry name" value="AP_endonuc_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020847">
        <property type="entry name" value="AP_endonuclease_F1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020848">
        <property type="entry name" value="AP_endonuclease_F1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22748">
        <property type="entry name" value="PTHR22748"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00633">
        <property type="entry name" value="xth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00726">
        <property type="entry name" value="AP_NUCLEASE_F1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00728">
        <property type="entry name" value="AP_NUCLEASE_F1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51435">
        <property type="entry name" value="AP_NUCLEASE_F1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="3">
        <location>
            <begin position="5"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="29919" checksum="208C1BCDCB87E454" modified="2011-01-11" version="1">MKLISWNVNGLRACVTKGFYTYLKETDADIFCVQETKLQEGQILMENMEEYAQYWNYAEKKGYSGTAIFTKIKPLSVHYGLEENEEPEGRTITLEFEKFYLVNVYTPNTKRDLSRLPYRLEWEDRFRSYLQQLDAQKPVIICGDLNVAHQEIDLKNAKANYGNAGFTPEERDRMSQLLNAGFIDTFRYFYPDRTDVYSWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASIDCHITGSDHCPVILDLQDISA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA01</accession>
    <name>E3EA01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araQ5</name>
        <name evidence="7" type="ORF">PPSC2_19580</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372706.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06800"/>
    <dbReference type="EnsemblBacteria" id="ADO58134">
        <property type="protein sequence ID" value="ADO58134"/>
        <property type="gene ID" value="PPSC2_19580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4174"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_1_9"/>
    <dbReference type="OMA" id="GQHAFEW"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="133"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="181"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="70"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="30917" checksum="3DE661C7A57A2092" modified="2011-01-11" version="1">MMQTRAKSIVLYAGLLVGIILSMFPFYWLIVMATRTTSDIYRFPPQLWFGSHFLDNITRVLQQIDFAGAFFNTLFVASSVTVLVLFFDSLAGFAFAKFDFPGKKGLFVILLATMMVPSQLSLVPSFVMMASFGWVGTFKALIIPGMVNAFGIFWIRQYAEESIPKELLDAGRMDGCSFFRLYWNVALPILRPAFAFLGAFTFIGAWNDYLWPLIVLTDERKFTLQIALSQLNGIYNTDYAMVIAGTLLAVLPLIILFLFISRQFISDLAAGAIKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA05</accession>
    <name>E3EA05_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">msbA3</name>
        <name evidence="10" type="ORF">PPSC2_19590</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="10 11">SC2</strain>
        </source>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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        <location>
            <begin position="20"/>
            <end position="43"/>
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            <end position="301"/>
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            <end position="370"/>
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        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
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    </evidence>
    <sequence length="557" mass="63456" checksum="7E0E779382564DE1" modified="2011-01-11" version="1">MIVLEYLKKYLSKTRKYVFFYIAVTSVLWIIGIIVPYITGIYIDYLVSKSNISIILYFVLLLGIINIANILIQYLTALFSTKLNNLLLYEICNDIYQKIFKTKLSVFKDKDNAYLVDQINNDSSTVVDFFSNNISNLVLQVITIIVSGIIVLKADVLLCVIIFSLIPFYIFTYVVFRKKLYKANLKYKKEANEYYSKKVEQINKLVFIKKNVLFNEMNERLNKAFNSLFRVATSQVKTNYIFSNLNQFILIICYIFVIGIGGHKVVIGQMSVGQFTIINTYLSMIISSTSYLLSLASSYQETKVSIERLNDIMKSENDIYGSATLVELEKISIKKLGVKYSGESVFRDFSYDFSKGEIYGICGHNGSGKTTLLNTMIGLYSDLYTGEIAFNNCSIKDLDMLNMRRFKISYVEQNPEFLNLPIEEYLRFGINFSKETASNQNELINAFGLEGMITKSNLENILINENGSNFSGGEKQKLSLIRALSKDSFLTILDEPTSALDSKSVSGLVEILTKQKSRKITIVVSHDQRLLAACDHILNIEIQKERDDIGFHSYGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA55</accession>
    <name>E3EA55_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Thiol-disulfide isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
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        <name evidence="2" type="ORF">PPSC2_20535</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PPSC2_20535"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="1630944at2"/>
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        <property type="component" value="Chromosome"/>
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    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="THIOREDOXIN_2"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
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            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
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        </source>
    </evidence>
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        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="12993" checksum="4744675D16C4166E" modified="2011-01-11" version="1">MQKIVSHEDFNKAISTPGVTVAVFKADWCGDCHFIDPFMPDVEQQYADKLTLIEIDVEQAESVSQEQNVLGIPSFIAYSEGRELVRLVNRLRKSREEIEQFLDRAVEVHANLAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAL5</accession>
    <name>E3EAL5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transport permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rfbA5</name>
        <name evidence="8" type="ORF">PPSC2_22700</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-2 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4831"/>
    <dbReference type="EnsemblBacteria" id="ADO58773">
        <property type="protein sequence ID" value="ADO58773"/>
        <property type="gene ID" value="PPSC2_22700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22700"/>
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    <dbReference type="eggNOG" id="COG1682">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_596786_0_0_9"/>
    <dbReference type="OMA" id="TNCMLEY"/>
    <dbReference type="OrthoDB" id="577810at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="173"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="220"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="258"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="305"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="338"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="368"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="426"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="7">
        <location>
            <begin position="207"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="455" mass="52732" checksum="25C5C98E4E032B8F" modified="2011-01-11" version="1">MKLLKQIILLVLTIAFMLFCFRTLQLYDRFHSDVDFSIEVKADHADDYQVFYTAGTNEWAEDSSIHQVYDKVGSWVRLHYTIPSDTTKLRLDVGSKKSHIELRNMSIKAYSTYDTHFTDLAFIDVQQIKVKDKLNNSVAMITNGSDPYFSFNSAPIISKALSGTNYFKTSKNILMSLIAGLLIYFIARYLRGTMCFTGRILTEPRLVSSLARNDFKTKYAASYLGVVWGFVTPLLTIVTYWFVFQVGLRSGNVAEVPFILWFIAGIVPWFFFSEALSGSTNVFAEYSYLVKKVVFKIELLPSVKIISSLYVHLFFILFIFAVYGIYGYTPTLYSLQLIYYLFSMVVLVYSLSLLTSSIVLFFKDLNQIISIILTIGFWFTPIGWSVTMLPDFWRNIFKLNPMYYIVQGFRDTFIDHILFYERPYQFVYFWILCLAILTLGTKVFKKLKPHFSDVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAY1</accession>
    <name>E3EAY1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59045.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5107"/>
    <dbReference type="EnsemblBacteria" id="ADO59045">
        <property type="protein sequence ID" value="ADO59045"/>
        <property type="gene ID" value="PPSC2_23950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5068"/>
    <dbReference type="eggNOG" id="ENOG5032BWD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_771269_0_0_9"/>
    <dbReference type="OrthoDB" id="976656at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59045.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="359" mass="41474" checksum="E1A784D331E6C822" modified="2015-05-27" version="2">MLSSLFLNGCSEKPTNEKQQAADPTKPSTQVIEQKAVTEPESAAQKQDRNSNIVNPINKRNGNYVTDSNTLDQFIKKIQPQNEQLQKVLKEDLDRDGKPEYVLAFGLEKEEIDNIFVAREDTGYHIIGKLEDPVMVAHLNTDMKIMKLDQTEQKFIVVYSTSEVNEAEGFSIFTLDHNRINNLNYNYPEATGQGIRKLEDINKDGVYEDVSYYRFQDTQQHTIITYQKFDSTGPEKTKVLYENKNKKFVYPMVPTDIIQNYLEDHYLMNRFFIHLPEMAEFTALSASPKNHFEDIIDFSAMDYTGLDLNIKEIANEANQRTFLVRSNSSEEKKDKGLVFTLEKQSGKWKIMSIEMNDKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB00</accession>
    <name>E3EB00_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alkylphosphonate utilization protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">phnA</name>
        <name evidence="4" type="ORF">PPSC2_24995</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YjdM family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373813.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12490"/>
    <dbReference type="EnsemblBacteria" id="ADO59280">
        <property type="protein sequence ID" value="ADO59280"/>
        <property type="gene ID" value="PPSC2_24995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5297"/>
    <dbReference type="eggNOG" id="COG2824">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_134486_0_1_9"/>
    <dbReference type="OMA" id="AHEWTLE"/>
    <dbReference type="OrthoDB" id="1507972at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004624">
        <property type="entry name" value="YjdM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013988">
        <property type="entry name" value="YjdM_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013987">
        <property type="entry name" value="YjdM_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30305:SF3">
        <property type="entry name" value="PTHR30305:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03831">
        <property type="entry name" value="YjdM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08274">
        <property type="entry name" value="YjdM_Zn_Ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00686">
        <property type="entry name" value="phnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YjdM_Zn_Ribbon" evidence="3">
        <location>
            <begin position="4"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="YjdM" evidence="2">
        <location>
            <begin position="46"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12501" checksum="6EAF30C88F4C362E" modified="2011-01-11" version="1">MSNLPNCPECNSEYTYEDRSLFICPECAHEWSAESETESSEDVKVVKDANGNILKDGDSVTVIKDLKVKGSSSVLKIGTKVKNIRLVEGDHDIDCKIDGFGAMKLKSEFVKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB02</accession>
    <name>E3EB02_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sphingosine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yegS</name>
        <name evidence="4" type="ORF">PPSC2_25005</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the diacylglycerol/lipid kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373815.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12500"/>
    <dbReference type="EnsemblBacteria" id="ADO59282">
        <property type="protein sequence ID" value="ADO59282"/>
        <property type="gene ID" value="PPSC2_25005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5299"/>
    <dbReference type="eggNOG" id="COG1597">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045532_1_0_9"/>
    <dbReference type="OMA" id="VNDAYFM"/>
    <dbReference type="OrthoDB" id="869726at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003951">
        <property type="term" value="F:NAD+ kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005218">
        <property type="entry name" value="Diacylglycerol/lipid_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001206">
        <property type="entry name" value="Diacylglycerol_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045540">
        <property type="entry name" value="YegS/DAGK_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00781">
        <property type="entry name" value="DAGK_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19279">
        <property type="entry name" value="YegS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00046">
        <property type="entry name" value="DAGKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="SSF111331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00147">
        <property type="entry name" value="TIGR00147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50146">
        <property type="entry name" value="DAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAGKc" evidence="3">
        <location>
            <begin position="1"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="32208" checksum="31283170800773B4" modified="2011-01-11" version="1">MKKAMVIVNPSSGKEESLQHVRKVEEILREQGYAVTVKETAQELDATRFCVTACQETYDLVVSLGGDGTLHETINGFMDQAHRPKLGVIPLGTVNDFARALQIPLSPELAIRTLTSARVKAVDMGLLNGRMFANVVATGSLAESLSAVSSDDKSMFGTFAYFKEGLKELINHPVHPLIVRYDDRTWEGESPLFLATLTNSVGGFEKLAPGAAVDDGLLHCFIFKNLNILNTVTASISLFLGNLKDHSDIVYFTAKHVSVSSAEPVSTNVDGEEGPSLPIELGILARHIEVIVPEESE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBK6</accession>
    <name>E3EBK6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Arginine biosynthesis bifunctional protein ArgJ</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="7">Glutamate N-acetyltransferase</fullName>
                <ecNumber evidence="7">2.3.1.35</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="7">Ornithine acetyltransferase</fullName>
                <shortName evidence="7">OATase</shortName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="7">Ornithine transacetylase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="7">Amino-acid acetyltransferase</fullName>
                <ecNumber evidence="7">2.3.1.1</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="7">N-acetylglutamate synthase</fullName>
                <shortName evidence="7">AGSase</shortName>
            </alternativeName>
        </domain>
        <component>
            <recommendedName>
                <fullName evidence="7">Arginine biosynthesis bifunctional protein ArgJ alpha chain</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="7">Arginine biosynthesis bifunctional protein ArgJ beta chain</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">argJ</name>
        <name evidence="8" type="ORF">PPSC2_22925</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>L-glutamate + N(2)-acetyl-L-ornithine = L-ornithine + N-acetyl-L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:15349"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:44337"/>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
            <dbReference type="ChEBI" id="CHEBI:57805"/>
            <dbReference type="EC" id="2.3.1.35"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>acetyl-CoA + L-glutamate = CoA + H(+) + N-acetyl-L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24292"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:44337"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.1.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Amino-acid biosynthesis; L-arginine biosynthesis; L-ornithine and N-acetyl-L-glutamate from L-glutamate and N(2)-acetyl-L-ornithine (cyclic): step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 7">Heterotetramer of two alpha and two beta chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="7">Some bacteria possess a monofunctional ArgJ, i.e., capable of catalyzing only the fifth step of the arginine biosynthetic pathway.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the ArgJ family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.35" evidence="7"/>
    <dbReference type="EC" id="2.3.1.1" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373362.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10400"/>
    <dbReference type="MEROPS" id="T05.002"/>
    <dbReference type="EnsemblBacteria" id="ADO58824">
        <property type="protein sequence ID" value="ADO58824"/>
        <property type="gene ID" value="PPSC2_22925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4854"/>
    <dbReference type="eggNOG" id="COG1364">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027172_1_0_9"/>
    <dbReference type="OMA" id="DYVHENS"/>
    <dbReference type="OrthoDB" id="1083409at2"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00106"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004042">
        <property type="term" value="F:acetyl-CoA:L-glutamate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004358">
        <property type="term" value="F:glutamate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103045">
        <property type="term" value="F:methione N-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02152">
        <property type="entry name" value="OAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01106">
        <property type="entry name" value="ArgJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002813">
        <property type="entry name" value="Arg_biosynth_ArgJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016117">
        <property type="entry name" value="ArgJ-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042195">
        <property type="entry name" value="ArgJ_beta_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23100">
        <property type="entry name" value="PTHR23100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01960">
        <property type="entry name" value="ArgJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56266">
        <property type="entry name" value="SSF56266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00120">
        <property type="entry name" value="ArgJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="chain" id="PRO_5023468621" description="Arginine biosynthesis bifunctional protein ArgJ alpha chain" evidence="7">
        <location>
            <begin position="1"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5023468622" description="Arginine biosynthesis bifunctional protein ArgJ beta chain" evidence="7">
        <location>
            <begin position="195"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="158"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="281"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="403"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="408"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Involved in the stabilization of negative charge on the oxyanion by the formation of the oxyanion hole" evidence="7">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <feature type="site" description="Involved in the stabilization of negative charge on the oxyanion by the formation of the oxyanion hole" evidence="7">
        <location>
            <position position="120"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage; by autolysis" evidence="7">
        <location>
            <begin position="194"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="408" mass="42541" checksum="308065AE38E3AE54" modified="2011-01-11" version="1">MGKVGFTVVHEGNIVTPRGFTAGGLHCGLKNTNRNDIGAIRCEVEATAAAVYTTNVFQAAPLKVTRESLTDGRLQAIVVNSGNANACTGQQGEQDAYAMRSAAAHQLGVAESDVAVASTGVIGEHLKMDRVLGGISSLPERMSEASDGAEQFSQAILTTDLVKKEACVSVEVDGVTVHIAGAAKGSGMIHPNMATMLAFITCDAVIGQTALHQLLKQATDTSFNMITVDGDTSTNDMLIAMASGLAGNSELHTDHPDWEAFAEAFTYICRELAKAIARDGEGATKLVEVSVSGAISDASAQAIAKTVIGSSLVKSAVFGADANWGRIIAAVGRAGEPVNPDTVDIRLGDIIVLSQSSPVAFDEAEALSYLRGDTVQIIVDLHHGNGTATAWGCDLTYDYVRINAAYRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBT2</accession>
    <name>E3EBT2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373591.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11510"/>
    <dbReference type="EnsemblBacteria" id="ADO59056">
        <property type="protein sequence ID" value="ADO59056"/>
        <property type="gene ID" value="PPSC2_24005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5079"/>
    <dbReference type="eggNOG" id="COG1357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033401_5_5_9"/>
    <dbReference type="OMA" id="TGCNLSY"/>
    <dbReference type="OrthoDB" id="1677662at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13599">
        <property type="entry name" value="Pentapeptide_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="202" mass="22855" checksum="C2F5F18C95EF5865" modified="2011-01-11" version="1">MFFYTDKVYEGRDFGSMDAREGEWRNCEFTRCRFRGVEMNESLVEDCTFVDCDFTGAILNASHYKESAFTNCLFTSANLFVVRFDNCKLVGSDFAGANMDGITITGGDWSYTNLRHADLRKQDLRKIRFKEADLSECHLEKADLREADLTRVRLHKAHLQGTDLRGAKMDGVNFKDLDITGAKLDIELAVAVARSYGAKIDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBT9</accession>
    <name>E3EBT9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ywbI5</name>
        <name evidence="3" type="ORF">PPSC2_24025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373598.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11530"/>
    <dbReference type="EnsemblBacteria" id="ADO59063">
        <property type="protein sequence ID" value="ADO59063"/>
        <property type="gene ID" value="PPSC2_24025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5085"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="FAFMPPR"/>
    <dbReference type="OrthoDB" id="990666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="9"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="34945" checksum="B77FAD84973BAF6E" modified="2011-01-11" version="1">MSMEEGVALDIRHLQYFLEVARLRSFTKAAQSMFITQPTISKTIKSLEEELGVTLFDRIGKRIELTDAGKVIELQAQAIVKSFQSLSSELSDLMNLKKGHIRIGLPPMVGSSFFPRVIGEFHKAFPDVTIQLFEDGAKKVEQDVEAGALDIGVIVLPPVGDMFETFLFVEEKLNLLVHPTHALADCKEVPLSALAEEAFVLFREDFTLHDRIIAECVRAGFQPRVVYESSQWDLISEMVAANLGVALLPEAICRDLDSERLRILPLVDPVIPWHLGMIWRNDRYLSFAAREWISFTQRLLRTEYGGSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC09</accession>
    <name>E3EC09_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Serine protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yyxA</name>
        <name evidence="8" type="ORF">PPSC2_25310</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase S1C family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373882.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12805"/>
    <dbReference type="EnsemblBacteria" id="ADO59349">
        <property type="protein sequence ID" value="ADO59349"/>
        <property type="gene ID" value="PPSC2_25310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5366"/>
    <dbReference type="eggNOG" id="COG0265">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020120_0_2_9"/>
    <dbReference type="OMA" id="DTRHFDY"/>
    <dbReference type="OrthoDB" id="741829at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043504">
        <property type="entry name" value="Peptidase_S1_PA_chymotrypsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001940">
        <property type="entry name" value="Peptidase_S1C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00834">
        <property type="entry name" value="PROTEASES2C"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0720">Serine protease</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="7">
        <location>
            <begin position="306"/>
            <end position="405"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="43953" checksum="BE551A42BC7EFE05" modified="2011-01-11" version="1">MGLFEDDFYSTKVSTRAAKKTAFKARRGGRGRWPHRNRRVSPVQAAVISGAVSAVVAVLLFSFITGLPSTTAVTGASHYPLRQAAGDPYDRIVQAAAKIRPAVVSIVNLKGEDGNSTEQSALGSGVIFRVSSGKAFIMTNNHVIEGSDDLDIVTVDGVRKEAKLVGKDRISDIAVLAVDDKGISTVADIGDSSKLRLGETVIAIGNPLGLGDTLTSGIVSYTNRIIPISINQDGVYDWEQHVIQTDAAINEGNSGGALVDLDGRVIGINTMKIADTGVEGLGFAIPANEVMKTVNELVEDGKITRPYLGVYTVDLNNEYAPLDETQRKELKLPDSVKDGAVVLEAHGPAKEGGLKLNDVITAFDGEPINSTLDLRRYLYDNKKIGDELKVTFYRAGKEESVTLKLTDKPEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC42</accession>
    <name>E3EC42_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_25470</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373912.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12965"/>
    <dbReference type="EnsemblBacteria" id="ADO59382">
        <property type="protein sequence ID" value="ADO59382"/>
        <property type="gene ID" value="PPSC2_25470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5397"/>
    <dbReference type="eggNOG" id="COG1196">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_101313_1_0_9"/>
    <dbReference type="OMA" id="GCSVYAK"/>
    <dbReference type="OrthoDB" id="1893112at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027981">
        <property type="entry name" value="DUF4446"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14584">
        <property type="entry name" value="DUF4446"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="53"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="18808" checksum="A4EF80AF448A6E53" modified="2011-01-11" version="1">MAELNGLIMEQLAGIVAGIVLILLILLIVIIVQGSKLKKIRRKYETMMAGSGVENLETLLIDLKVQMDTIEDEQEAHRASMKSLRSKLTGLKGHIGIKRYNAFGERGSDLSFSLAIVDDNQDGIVLTGIYNRDGSYVYAKPLEAGQSAYSLSPEEKEAITLAQQVGQTGNATP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC48</accession>
    <name>E3EC48_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">Glucose-inhibited division protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">mnmG</name>
        <name evidence="11 14" type="synonym">gidA</name>
        <name evidence="14" type="ORF">PPSC2_25495</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 11">NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="9 11">Homodimer. Heterotetramer of two MnmE and two MnmG subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the MnmG family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373918.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12990"/>
    <dbReference type="EnsemblBacteria" id="ADO59388">
        <property type="protein sequence ID" value="ADO59388"/>
        <property type="gene ID" value="PPSC2_25495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5403"/>
    <dbReference type="eggNOG" id="COG0445">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007831_2_2_9"/>
    <dbReference type="OMA" id="FRPGYAI"/>
    <dbReference type="OrthoDB" id="146811at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002098">
        <property type="term" value="P:tRNA wobble uridine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00129">
        <property type="entry name" value="MnmG_GidA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004416">
        <property type="entry name" value="MnmG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002218">
        <property type="entry name" value="MnmG-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020595">
        <property type="entry name" value="MnmG-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026904">
        <property type="entry name" value="MnmG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044920">
        <property type="entry name" value="MnmG_C_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040131">
        <property type="entry name" value="MnmG_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806">
        <property type="entry name" value="PTHR11806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806:SF0">
        <property type="entry name" value="PTHR11806:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01134">
        <property type="entry name" value="GIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13932">
        <property type="entry name" value="GIDA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00136">
        <property type="entry name" value="gidA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01280">
        <property type="entry name" value="GIDA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01281">
        <property type="entry name" value="GIDA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 11" id="KW-0274">FAD</keyword>
    <keyword evidence="5 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8 11" id="KW-0520">NAD</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="GIDA" evidence="12">
        <location>
            <begin position="9"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="domain" description="GIDA_C" evidence="13">
        <location>
            <begin position="401"/>
            <end position="614"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="14"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="126"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="273"/>
            <end position="287"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="370"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF13932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO59388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="629" mass="70171" checksum="7D0E0B205746F6CC" modified="2011-01-11" version="1">MGYQGGDYDVIIVGAGHAGVESALAAARMGCRTLMITINLDMVAFMPCNPSIGGPAKGHVVREIDALGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHAMKETMEKEPNLTLRQGMVEELIIEDGKCVGVITKTGTEYRSKAVVLTTGTYLRGKIIMGELMYESGPNNQQPSLRLSEHLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDDQPKFFSYETKSSDNEQLPCWLTYTSVETHQIINDNLHRAPMFSGLIEGTGPRYCPSIEDKVVRFSDKPKHQIFLEPEGKNTSEYYVQGLSTSLPEDVQLAVLRTIPGMEKVEMMRNGYAIEYDAMVPTQLWPTLETKKVPGLFTAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVVLDRSQGYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTPIGHDIGLITDERYERFLDKKQKVEQEIERLRLAKVRPVDVNEMLEQGGSAPIQDGSNLLTVLRRPEISYAQVAQISPSPVALTEEEQEQVEIQIKYAGYIEKQLMHVERLQKMEKKKLPEDIAYNEVQGLAIEAKQKLEKIRPMSIGQASRISGVTPADISILLVYLEHYNRVTAARGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC85</accession>
    <name>E3EC85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YxbD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yxbD</name>
        <name evidence="2" type="ORF">PPSC2_01215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0241"/>
    <dbReference type="EnsemblBacteria" id="ADO54228">
        <property type="protein sequence ID" value="ADO54228"/>
        <property type="gene ID" value="PPSC2_01215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.233"/>
    <dbReference type="eggNOG" id="COG0456">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_140876_0_0_9"/>
    <dbReference type="OMA" id="NECEIIS"/>
    <dbReference type="OrthoDB" id="2055010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="18092" checksum="74BF768263A69300" modified="2011-01-11" version="1">MRIINIKEFDKKMITNFFICNWGTPQMVISSGIYQCDELDGFAILDHKEKIMGLITYVISDNECEIISLDSKDENKGIGTALLNQVEAVSKKSGCCKLKIVTTNDNLHAFLFYQKKGYQIARIFPNSVEKARIIKPEIPKISNNGIPIRDEILFEKCIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECF6</accession>
    <name>E3ECF6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvmB1</name>
        <name evidence="2" type="ORF">PPSC2_01555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO54299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0315"/>
    <dbReference type="EnsemblBacteria" id="ADO54299">
        <property type="protein sequence ID" value="ADO54299"/>
        <property type="gene ID" value="PPSC2_01555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.309"/>
    <dbReference type="eggNOG" id="COG1846">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_11_2_9"/>
    <dbReference type="OMA" id="KKEVYFR"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="18889" checksum="3E8650F3011DDC4E" modified="2011-01-11" version="1">MEKATSVQHVYDLLIKMNHQLEQHQQRESMTFLEEIREHFDGMTSLNMTDVHVMDCIGRHEPINVTTLAERMELSKGTISKVSTKLLKEGWIRRTQLNDNKKEIYFRLTPLGKKLFLVHERLHAKVQHQLFQFLDRYSSEELHVLKRLLSDGVGFLEAME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECI3</accession>
    <name>E3ECI3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-479</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-479</name>
        <name evidence="2" type="ORF">PPSC2_01675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368968.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14445"/>
    <dbReference type="EnsemblBacteria" id="ADO54326">
        <property type="protein sequence ID" value="ADO54326"/>
        <property type="gene ID" value="PPSC2_01675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.335"/>
    <dbReference type="eggNOG" id="ENOG5033DJI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_153192_0_0_9"/>
    <dbReference type="OMA" id="QYQAHKA"/>
    <dbReference type="OrthoDB" id="1676714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168777" evidence="1">
        <location>
            <begin position="31"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="132" mass="14492" checksum="F4048DA004C62FDC" modified="2011-01-11" version="1">MNRKRMLVICTLLLALSIGQSSTWGSRTNAAALAPERALHVQDNEASKDDDLLKTLGISSDEQLYDALYNGQTLADIAQTHNQDAQAIVDLQVAQLTEQLDQRLANKSITLEQYQAHKAELTQVVAKSVFGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECM3</accession>
    <name>E3ECM3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-943</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-943</name>
        <name evidence="2" type="ORF">PPSC2_04025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369430.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16825"/>
    <dbReference type="EnsemblBacteria" id="ADO54795">
        <property type="protein sequence ID" value="ADO54795"/>
        <property type="gene ID" value="PPSC2_04025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.802"/>
    <dbReference type="eggNOG" id="ENOG5033K2S">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_175650_0_0_9"/>
    <dbReference type="OMA" id="RYDEYMS"/>
    <dbReference type="OrthoDB" id="2070323at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9673" checksum="981076E32B7C66C8" modified="2011-01-11" version="1">MSQSEELERQLSELLTEGEIRENEAKKRERLSPKYEVRVQTQMDPIVEETRKYRSMARELDDRYDEYMSKADKSKANDQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS5</accession>
    <name>E3ECS5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">papX1</name>
        <name evidence="2" type="ORF">PPSC2_01880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369009.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0385"/>
    <dbReference type="EnsemblBacteria" id="ADO54369">
        <property type="protein sequence ID" value="ADO54369"/>
        <property type="gene ID" value="PPSC2_01880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.378"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_3_9"/>
    <dbReference type="OMA" id="SITYEIR"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="23"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="20345" checksum="94773402FE1F8472" modified="2011-01-11" version="1">MFFFLDSEIRQLAYNLFPGGNKPIGVLVDLFSITYEIRKNMEKRSREFGLSYGQYIALCVLSAQRDEMSSPSALAEKMGVSRAAISSMVISLEQEGFINKYDDPNDKRGVFVSLNDKGRSKIQQMDPFFIGLASRLMSDFTEAELCQFQTYLSRVRDAFEDVKGSRLTTPSALREEEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="81" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECX2</accession>
    <name>E3ECX2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Amidophosphoribosyltransferase</fullName>
            <shortName evidence="5">ATase</shortName>
            <ecNumber evidence="5">2.4.2.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Glutamine phosphoribosylpyrophosphate amidotransferase</fullName>
            <shortName evidence="5">GPATase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 11" type="primary">purF</name>
        <name evidence="11" type="ORF">PPSC2_04245</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>5-phospho-beta-D-ribosylamine + diphosphate + L-glutamate = 5-phospho-alpha-D-ribose 1-diphosphate + H2O + L-glutamine</text>
            <dbReference type="Rhea" id="RHEA:14905"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58681"/>
            <dbReference type="EC" id="2.4.2.14"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5 8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5 9">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 5 6">Purine metabolism; IMP biosynthesis via de novo pathway; N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5 6">In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.14" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369475.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17060"/>
    <dbReference type="MEROPS" id="C44.001"/>
    <dbReference type="EnsemblBacteria" id="ADO54841">
        <property type="protein sequence ID" value="ADO54841"/>
        <property type="gene ID" value="PPSC2_04245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.845"/>
    <dbReference type="eggNOG" id="COG0034">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022389_3_1_9"/>
    <dbReference type="OMA" id="ENAQPTF"/>
    <dbReference type="OrthoDB" id="267682at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004044">
        <property type="term" value="F:amidophosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009113">
        <property type="term" value="P:purine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00715">
        <property type="entry name" value="GPATase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01931">
        <property type="entry name" value="PurF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005854">
        <property type="entry name" value="PurF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035584">
        <property type="entry name" value="PurF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13537">
        <property type="entry name" value="GATase_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000485">
        <property type="entry name" value="Amd_phspho_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01134">
        <property type="entry name" value="purF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="5 6 11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5 9" id="KW-0408">Iron</keyword>
    <keyword evidence="5 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5 6" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="10">
        <location>
            <begin position="33"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5 7">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="267"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="314"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="376"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="377"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="413"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="469"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="472"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="493" mass="54175" checksum="B0E2327A471F1ACA" modified="2011-01-11" version="1">MSDEITARTLWTGDYYNEGSGKEGLFDKLKEECGVFGVYRHSDAASLAYYGLHALQHRGEESAGICVSSGDEFHYHRGMGLVKEVFNKDLMASLTGDIAIGHVRYSTSGDSKLTNAQPLVFKYRDGDLAVATNGNIVNALQIRHELEQGGSIFQTTSDTEVVAHLIARSSKDLVEAAKDALKRIVGGFAFLIMTNDKLLVASDPNGLRPLTMGRLGDAYLFASESCALETIGAELLRDIEPGELLILDKNGLHEDRYTEDKQRKALCAMEYIYFARPDSDLNGANLHAARKRMGSQLALEAFVDADLVTGVPDSSISAAIGYAEQTGIPYELGMIKNKYTGRTFIQPSQELREQGVKMKLSAVRRVVEGKRVIMIDDSIVRGTTSRRIVNMLRDAGALEVHVRITSPPFKNPCFYGIDTPDRRELIASSKTVEEIRQEINADSLFFMSAEGLIAAVGGHNEQDYKGGLCLACFDNDYPTQVDFKGEEKFGCSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED15</accession>
    <name>E3ED15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Peptide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnQ5</name>
        <name evidence="6" type="ORF">PPSC2_04445</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369518.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17275"/>
    <dbReference type="EnsemblBacteria" id="ADO54884">
        <property type="protein sequence ID" value="ADO54884"/>
        <property type="gene ID" value="PPSC2_04445"/>
    </dbReference>
    <dbReference type="GeneID" id="66574089"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.888"/>
    <dbReference type="eggNOG" id="COG1126">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="EVFCLIG"/>
    <dbReference type="OrthoDB" id="1191583at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="26731" checksum="4FD4277297F0073D" modified="2011-01-11" version="1">MGKIIVKNLKKSYGSNQVLKGIDMQVREGEVVCVIGPSGSGKSTFLRCMNMLEEITAGEVIVDDYKLGDKNVDINKVRENIGMVFQHFNLFPHMTVLKNIMFAPTELGKQTKTEARETAMKLLDRVGLADKADALPGQLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVGEVLGVMKDLAREGMTMMIVTHEMGFAREVSDRVVFMDGGYIVEEGTPQEVFGNPKNERTISFLEKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED49</accession>
    <name>E3ED49_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppC1</name>
        <name evidence="7" type="ORF">PPSC2_02190</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369046.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14955"/>
    <dbReference type="EnsemblBacteria" id="ADO54406">
        <property type="protein sequence ID" value="ADO54406"/>
        <property type="gene ID" value="PPSC2_02190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.415"/>
    <dbReference type="eggNOG" id="COG1173">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028518_1_4_9"/>
    <dbReference type="OMA" id="PSPPTWM"/>
    <dbReference type="OrthoDB" id="1734230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="205"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="267"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="96"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="302" mass="33072" checksum="E14908517D69D7A1" modified="2011-01-11" version="1">MVSMQVEEVFSPEIIRKSPSSWSVLRRELVRDKMALISIGFVALFLIFIYASVLFVNQDVVTTVDLGAIREAPGSVHWLGTDRAGRDIFGQLVIGARNSFTIGFTITLLSAAIGLTLGLLAGFYGGLVDNIIMRIIDFILVLPFLMLVIVFVSIVPKSGIGSFIFIMTAFLWIGKARLIRAKVLSERELDYVQASKTLGTPNWKIIWLGVLPNLSSVVIVNLTLSLAGNIGIETGLSYLGFGLPESTPSLGTLVSYANDPDVLQNNWWMWLPASLLILVLMLAINFIGQALKRATDAKQRLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDL3</accession>
    <name>E3EDL3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Manganese transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">troA</name>
        <name evidence="5" type="ORF">PPSC2_06460</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial solute-binding protein 9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369952.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19425"/>
    <dbReference type="EnsemblBacteria" id="ADO55321">
        <property type="protein sequence ID" value="ADO55321"/>
        <property type="gene ID" value="PPSC2_06460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1331"/>
    <dbReference type="eggNOG" id="COG0803">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016838_1_1_9"/>
    <dbReference type="OMA" id="DPHIWFD"/>
    <dbReference type="OrthoDB" id="1703187at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030001">
        <property type="term" value="P:metal ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006129">
        <property type="entry name" value="AdhesinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006128">
        <property type="entry name" value="Lipoprotein_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006127">
        <property type="entry name" value="ZnuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01297">
        <property type="entry name" value="ZnuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00691">
        <property type="entry name" value="ADHESINB"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00690">
        <property type="entry name" value="ADHESNFAMILY"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <keyword evidence="1 3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168863" evidence="4">
        <location>
            <begin position="35"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="35394" checksum="37F947B33217A62E" modified="2011-01-11" version="1">MNKQFKKALPQWVATVGVLSLVLVLATACTDAKKTEQGATKEAGQKIKATTTIGMISDIVGKVGGVHVEVTGIMKSGVDPHLYKASQGDMRKLDEADIIFYNGLHLEGKMQDILEKISKQKPVIPVSKNIAQNQLRAASPEMGSEYDPHIWFDVQNWMSAVETVRDELSALDAAHAEDYKANAEAYLAELRKLDDYTREQITSIPKAQRVLVTAHDAFGYFGDAYQIQVRGLQGMSTESEAGSQDVTKLRDYLVEHKIKAIFVESSVPRKAIDAVIQGAAQQSHTIQVGGELYSDAMGEEGTEDGTYIGMVKHNVNTIVRALK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE32</accession>
    <name>E3EE32_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fructosamine deglycase</fullName>
            <ecNumber evidence="1">3.5.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">agaS</name>
        <name evidence="3" type="ORF">PPSC2_02770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the conversion of a range of fructosamine 6-phosphates to glucose 6-phosphate and a free amino acid.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homooctamer.</text>
    </comment>
    <dbReference type="EC" id="3.5.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369152.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15570"/>
    <dbReference type="EnsemblBacteria" id="ADO54512">
        <property type="protein sequence ID" value="ADO54512"/>
        <property type="gene ID" value="PPSC2_02770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.522"/>
    <dbReference type="eggNOG" id="COG2222">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012520_3_0_9"/>
    <dbReference type="OMA" id="YAMCILE"/>
    <dbReference type="OrthoDB" id="1046291at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05710">
        <property type="entry name" value="SIS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035488">
        <property type="entry name" value="FrlB_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024713">
        <property type="entry name" value="Fructosamine_deglycase_FrlB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009290">
        <property type="entry name" value="FrlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="27"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR009290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="337" mass="38764" checksum="2B22E858829F6024" modified="2011-01-11" version="1">MLNFDEQLFLKLVEQEGLAFRGQIEEIVDGIAKKGYSNIFLIGAGGTIAMMYPYEYILKSNSTIDVHAAIAAEFMVMNNRHFSKDSVCIFTSVSGTTQETVAAAEFCKERGATTIALVAERDTPLTKIVDHCITTGSEKHSFDTFFMLLYMVVFRFMYNNNEFPQYEQFTKEVALLPRAILDAVKTFDPKAEAFAKEHKDTDYHMMVGSGNLWGNTYSYAMCILEEMQWIHAKSIHAAEFFHGTLELVVEDTSVILLKGEDETRPLMDRVERFAEKITKKLTIIDTKDFALEGISEEFRKHFAVSINWSVLSRISAYLERERNHPLTLRRYYRQMEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE80</accession>
    <name>E3EE80_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">occM1</name>
        <name evidence="8" type="ORF">PPSC2_05000</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369636.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17890"/>
    <dbReference type="EnsemblBacteria" id="ADO55003">
        <property type="protein sequence ID" value="ADO55003"/>
        <property type="gene ID" value="PPSC2_05000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1009"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_1_1_9"/>
    <dbReference type="OMA" id="IGLHYST"/>
    <dbReference type="OrthoDB" id="1523519at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="93"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="17"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="24682" checksum="5882C6A1F89D330E" modified="2011-01-11" version="1">MSMEYILRIMKPMLEGAQMTIILFFITLILSIPLGFIVTLLAKSRFKPIAWLMHTYIYVIRGTPLLLQLLFFCFGLPMLPVIGEYLVLDRTTAAVLAFVLNYAAYFAEIFRGGMLSIDKGQYEASQVLGLSKSQTLIRVIVPQMVRIALPAVTNEATTLVKDTALLYAVAVPELLHFANTAVNRDFSIVPYVVAAVIYLLMALVLTIFFRALEKRFKFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EED6</accession>
    <name>E3EED6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Alkaline phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">phoB1</name>
        <name evidence="9" type="ORF">PPSC2_06770</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the alkaline phosphatase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370018.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19735"/>
    <dbReference type="EnsemblBacteria" id="ADO55387">
        <property type="protein sequence ID" value="ADO55387"/>
        <property type="gene ID" value="PPSC2_06770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1394"/>
    <dbReference type="eggNOG" id="COG1785">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008539_6_2_9"/>
    <dbReference type="OMA" id="NLTGMMM"/>
    <dbReference type="OrthoDB" id="585847at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16012">
        <property type="entry name" value="ALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001952">
        <property type="entry name" value="Alkaline_phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018299">
        <property type="entry name" value="Alkaline_phosphatase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11596">
        <property type="entry name" value="PTHR11596"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00245">
        <property type="entry name" value="Alk_phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00113">
        <property type="entry name" value="ALKPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00098">
        <property type="entry name" value="alkPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00123">
        <property type="entry name" value="ALKALINE_PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169144" evidence="8">
        <location>
            <begin position="34"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="204"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="436" mass="45723" checksum="4B8718CAC129EF65" modified="2011-01-11" version="1">MKKPSMKKSILALSAVTVLTVPLLSADIPTAFAAATSTKSTVAESKAQKAVSAKADTPKNVILFIGDGMGEASRNAIRLATVGKSGLLEMDKMPITGLVSTSSGDNLVTDSAAAATAIATGVKTYNGAIGMDLNKKPVTTIMELAKKAGMSTGVVTTSQVTDATGAAFGAHVEKRSAQSEIAKQYLEKSKLDVILGGGEDFWYPAGTPGKHPDAPAEDPEEASKGTQGNLVEQAKKLGYSYVTDQAEMKAAKGSKLLGLFANEEMFQAHNKLGNSYNPTVSLPDMTAKAIDVLSKNKKGFFLMVEEEGTDEMAHDNEGELTIKAGQQLDKAVKVAKDYAKAHPDTLVLVTADHETGGLAIEGEDAEDESGEGVSKEDGPFTVKGSDEKFYIDWTTGGHTSVDVALTAMGPGSSQFSGNYPNTAIHDKLVKLLQLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEG8</accession>
    <name>E3EEG8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lysophospholipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_06910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370050.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19880"/>
    <dbReference type="EnsemblBacteria" id="ADO55419">
        <property type="protein sequence ID" value="ADO55419"/>
        <property type="gene ID" value="PPSC2_06910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1425"/>
    <dbReference type="eggNOG" id="COG2755">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3401">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037723_0_0_9"/>
    <dbReference type="OMA" id="HNDAAIN"/>
    <dbReference type="OrthoDB" id="1247435at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01821">
        <property type="entry name" value="Rhamnogalacturan_acetylesterase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037459">
        <property type="entry name" value="RhgT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43695">
        <property type="entry name" value="PTHR43695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168833" evidence="1">
        <location>
            <begin position="24"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="domain" description="SGNH_hydro" evidence="2">
        <location>
            <begin position="182"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="403" mass="43664" checksum="609A32EE3146C893" modified="2011-01-11" version="1">MIGLCVGFSLLFATILIPGQALAEKQLAAPLRFDFGPGDVADGYTQVTAKDAYTPERGYGFTDLSKVNGENRGGSDAIRSDFVRVQGSSFVVNLPPADYTLSLIAGDIAGNTDIMVKAESIVKVEPTAKTAGQFVEAGFELALIDGQLELYFSGNEAKINALVITPKGARTAGEHPSVYLAGDSTVQTYKSSMKPQAGWGQMIAPFFTDETIFVNRSIGGRSTKTFLVQGRLDDILRNIRPGDYLFIQFGHNDAAINNQERYVSPADYKVYLKTYIQGATQRGAVPVLITPVGRRDYDAASASFRISFPEYVQAMKETASETGVALVDLSQLSVAYYDTLGLEGTLPLFLHLEPGVYSAFPDGVKDDTHFQEYGAEQIARLVAQGVRDLNIPLSSYVKAENLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEH1</accession>
    <name>E3EEH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yoaA</name>
        <name evidence="2" type="ORF">PPSC2_06925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370053.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1443"/>
    <dbReference type="EnsemblBacteria" id="ADO55422">
        <property type="protein sequence ID" value="ADO55422"/>
        <property type="gene ID" value="PPSC2_06925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1428"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_3_6_9"/>
    <dbReference type="OMA" id="HSRIEIG"/>
    <dbReference type="OrthoDB" id="1538300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="14"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="22055" checksum="62E3D08DF96C1740" modified="2011-01-11" version="1">MTMETFPTLVTDRLYLRQLTLADAEDIFNYFSRDEVTKFYDLESFTKVEQAEKFIRSMLTRYEKQEGFRWGITLKEAPERVVGTIGFHNWQKEHSRIEIGYELAPEYWRQGLMTAAMKVVVDYGFQLPQVHRIEAFIDPDNEGSRRLLLKSGFTKEGHLRDYFYEKGQFVDAVVFGYLRKEFSAEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EER9</accession>
    <name>E3EER9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ankyrin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">anK3</name>
        <name evidence="2" type="ORF">PPSC2_08435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370375.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1784"/>
    <dbReference type="EnsemblBacteria" id="ADO55756">
        <property type="protein sequence ID" value="ADO55756"/>
        <property type="gene ID" value="PPSC2_08435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1773"/>
    <dbReference type="eggNOG" id="COG0666">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044830_0_0_9"/>
    <dbReference type="OMA" id="PDMVYPY"/>
    <dbReference type="OrthoDB" id="1623454at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13637">
        <property type="entry name" value="Ank_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="SSF48403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="48"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="140"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="178"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="360" mass="40622" checksum="47BCAAC21B9E4E5E" modified="2011-01-11" version="1">MIQLKDIGKFDVLPEIAMHIVEGNISALRQALTEGWDIEQEIKLSKHTTLSPLDLALISQRMDVLKLLVEQGVQLNAKDRPAFLTAVRYCSEEIVRYVVAHGAKLDGKNQVKSGAYEQAYYGNKKNIPLIHELGLDIKQHGGATLRNAVSNHDLNTVALLLEHGADINYNASDMVYPYKATPLTVAARNNDFAMVKYLVEHGADVTLAEKGGDRAYTIAVSNKNVEMAEYLKSVEPPAFHNLENKQHALKSYKLPKDLTAFLMGDQRRVDLPENDLGIQFVEFFSFIDTVEMKVGRQKLLRLSLEVDNYSDILLVWNPKHKCLGYYDEEHQEYADVCSFAEFLAQPGDYLEKMIEGEYLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEY1</accession>
    <name>E3EEY1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YybG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yybG</name>
        <name evidence="2" type="ORF">PPSC2_00585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368749.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0117"/>
    <dbReference type="EnsemblBacteria" id="ADO54104">
        <property type="protein sequence ID" value="ADO54104"/>
        <property type="gene ID" value="PPSC2_00585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.115"/>
    <dbReference type="eggNOG" id="COG1357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068870_0_0_9"/>
    <dbReference type="OMA" id="GCTVYDC"/>
    <dbReference type="OrthoDB" id="1677662at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="251"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="30279" checksum="4AF59D95EA34DCE5" modified="2011-01-11" version="1">MYTADCEKCFGLCCVALPYAKSADFAFNKDGGTPCQHLNADYRCDIHKNLRNNGLRGCTVYDCFGAGQKISQVVYNGKSWRDNPAIADEMFNLFPIMQQLHEMLYYLNEALSLKETHSIYTELHKAMEKTEQLTDQDPKSLIDLHVPTHRALVNDLLVQTSELVREKFKKNMENHKLSKKIKNRDLIGANLRGVNLRGANLRGVLLIAADLREADLSMTDLIGADFRDADLSGANLEGSIFLTQAQLNSAKGNSKTKLPPSLSFPSHWIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFA9</accession>
    <name>E3EFA9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-ketoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">linC</name>
        <name evidence="1" type="ORF">PPSC2_05320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369705.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18235"/>
    <dbReference type="EnsemblBacteria" id="ADO55072">
        <property type="protein sequence ID" value="ADO55072"/>
        <property type="gene ID" value="PPSC2_05320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1078"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_0_9"/>
    <dbReference type="OMA" id="KGVMFGM"/>
    <dbReference type="OrthoDB" id="1356861at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="28235" checksum="FB210B53186F1381" modified="2011-01-11" version="1">MAEQRLQGKIAVVSGGGSGIGKATAIRFAEQGAKVVLLDRTPEHAEETKAIIEQVGGEALVLECDISKPDMIQQGFAKVAETYGKLDIVFANAGINGTMAPIETMELEEWDHTMNINLRGTFATVKYAVPYLKERGGSIIITSSINGNRTFSGIGFSAYASTKAAQVAFMKMAALELARYKIRVNAICPGAIDTKIDDNTYPTEDLKKVQIPVEFPKGGEHPLEDAPGEPEQVANLVLFLASDESSHVSGTEIYVDGAESLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFE5</accession>
    <name>E3EFE5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">chvE</name>
        <name evidence="3" type="ORF">PPSC2_05475</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369741.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18385"/>
    <dbReference type="EnsemblBacteria" id="ADO55108">
        <property type="protein sequence ID" value="ADO55108"/>
        <property type="gene ID" value="PPSC2_05475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1112"/>
    <dbReference type="eggNOG" id="COG4213">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_13_1_9"/>
    <dbReference type="OMA" id="SARWIDD"/>
    <dbReference type="OrthoDB" id="859573at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168421" evidence="1">
        <location>
            <begin position="26"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="35"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="361" mass="39504" checksum="474814BBD7ADC9E2" modified="2011-01-11" version="1">MKKGAVVVWLLVLALMLSACNLAESGTGSKEKGYVGISMPTKSSERWVGDGENMVRLFQEQGYKTDLQYAEDVVENQISQIENMITKGVNVMVIASVDGNTLTDVIQKAHDQGIQVISYDRLIRNTPYLTYYATFDNFKVGVLQAAYIEKKLGLKEGKGPFNIELFGGSPDDNNAYFFFNGAMSVLKPYIDSGKLVVRSKQMTMAQIATLRWDGALAQSRMDNLLSAYYSGANLDAVLSPYDGISIGIISSLKGVGYGSANKPLPIITGQDAELASIKSIVAGEQTQTIFKDTRKLAEQTVVMANSILQGKQAKVNDVKSYNNGKKVIPAYLLDPISVDRTNVEKDIVGSHYYTKEQIGLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFM3</accession>
    <name>E3EFM3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">narP</name>
        <name evidence="7" type="ORF">PPSC2_07355</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370141.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20335"/>
    <dbReference type="EnsemblBacteria" id="ADO55514">
        <property type="protein sequence ID" value="ADO55514"/>
        <property type="gene ID" value="PPSC2_07355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1520"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_90_1_9"/>
    <dbReference type="OMA" id="SHIVIMT"/>
    <dbReference type="OrthoDB" id="1687028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="6"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="5">
        <location>
            <begin position="145"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="24825" checksum="FA598383AF30701D" modified="2011-01-11" version="1">MRKVWQVVIIDIHPTSMLGTKLILEDQQDLLVRGMSSSGTEGLELVCSIRPEIILMDYRLPEGTAEPFLTQMRVLSPDSHIVIMTDEDNITLFQQLISLGANGMLSKQASPSQLIHLINGLREGFASLPMDWIRCGNWPFMPLMASEPFDELTQTEVFIMERIVQGITYDKIAVEIEVSRRSIDNYLRKIYAKLGVSSRAQAIERYALYARQMKQLYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFX5</accession>
    <name>E3EFX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Phosphoglycerol transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yqgS</name>
        <name evidence="10" type="ORF">PPSC2_08845</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the LTA synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370465.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21310"/>
    <dbReference type="EnsemblBacteria" id="ADO55847">
        <property type="protein sequence ID" value="ADO55847"/>
        <property type="gene ID" value="PPSC2_08845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1865"/>
    <dbReference type="eggNOG" id="COG1368">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021310_0_0_9"/>
    <dbReference type="OMA" id="VSNHRPF"/>
    <dbReference type="OrthoDB" id="1067869at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012160">
        <property type="entry name" value="LtaS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005091">
        <property type="entry name" value="Mmb_sulf_HI1246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0464">Manganese</keyword>
    <keyword evidence="4 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="131"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="176"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="9">
        <location>
            <begin position="279"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="287"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="329"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="443"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="502"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="503"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR005091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR005091-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR005091-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR005091-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="660" mass="75703" checksum="B7603F22D2B8C1CE" modified="2011-01-11" version="1">MLVIRTTSARRTGNMFSRLLLSQYFGLVLFFVLMIGKLVLIHYNLHAQNIDMNPLDYVIAIGSLLLVSFWTLWLPRRGRLIALVVLDILLTALIYSDMVYYRYFQDFITIPVLLQAGQVDSLGGSIASLMYWWDIFFFADWILFIPYVIFVASLRRRFTTNDHYLEASRSSFTKRFLLRFSKGALAFLIGYVLTFGPIKIYTSTWATGIFVGNWWSMALYNVTGLIGFHGYDIYRYGQDHLGPQPTLAQVESDKDKEWFNQHQKLLQVKNDLYGKYKGKNVMVIQAEAFMNFFIGKQINGQAITPNFDKLTKESMYFNNYFHQTAQGRTSDADFSTHASLHPLPTGSVFIRYADHKFDTLPSILKDTGYSPNAFHVYDSSFWNRYTMYKAMNYDKFYSKKDFKIDEPLGWSLGDKSFFRQTLNDLTTEVKQPFYAYMVGISSHHPYNLSPDAVDLDVGEFEGTMFGDYLKSVHYVDEALGELVDQMKKDGLWDNTILMFYGDHDNSIKDKALYEKFLGKPLTDLDMQKIMNQVPLLVHLPDGSQAGTYTEPAGQLDLTPSVMHLLGISTKPYHFMGNDLFSGKPRMVVLRTGAFTDGRVYYIPSEDGTFSNGTCYNLSTGQPTDVNACGPGYTEALNRLKISDQVITYDLIREWETEAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFZ4</accession>
    <name>E3EFZ4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Chromosome partition protein Smc</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">smc</name>
        <name evidence="5" type="ORF">PPSC2_09695</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for chromosome condensation and partitioning.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="3">Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SMC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370642.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22160"/>
    <dbReference type="EnsemblBacteria" id="ADO56027">
        <property type="protein sequence ID" value="ADO56027"/>
        <property type="gene ID" value="PPSC2_09695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2043"/>
    <dbReference type="eggNOG" id="COG1196">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001042_2_2_9"/>
    <dbReference type="OMA" id="HNKIAME"/>
    <dbReference type="OrthoDB" id="1149850at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030261">
        <property type="term" value="P:chromosome condensation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007062">
        <property type="term" value="P:sister chromatid cohesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01894">
        <property type="entry name" value="Smc_prok"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024704">
        <property type="entry name" value="SMC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010935">
        <property type="entry name" value="SMC_hinge"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036277">
        <property type="entry name" value="SMC_hinge_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011890">
        <property type="entry name" value="SMC_prok"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06470">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005719">
        <property type="entry name" value="SMC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00968">
        <property type="entry name" value="SMC_hinge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75553">
        <property type="entry name" value="SSF75553"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02168">
        <property type="entry name" value="SMC_prok_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC hinge" evidence="4">
        <location>
            <begin position="521"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="167"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="262"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="332"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="682"/>
            <end position="828"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="878"/>
            <end position="926"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="32"/>
            <end position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1189" mass="135090" checksum="E8103D313F81294C" modified="2011-01-11" version="1">MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGKMEDIIFAGSDARKAVNYGEVSLTLDNEDQALPLDFGEVTVTRRVHRSGDSEYFINRQSCRLRDITELFMDTGIGKEAYSIIGQGRIEEILSTRSEDRRGIFEEASGIVKYKSRKKDAVRKLDETEQNLLRIHDLVSELEDQIGPLKEQSEKAIHFKELRSELKSKEISMYVHQIEQIHTSWSDATSKLALLQQEQLQLSTVVSRHDAMLENDRNELRQLEEQVERLQKDLLQYSEATEKSEGYGELLKERTRNLEANREQLILSLSTSESRHSERKSELDQLNEKLSALNVELDELRARLSDEEAKLIGVTGGISQEQEESLKGGLLELMNQMAQARNEIRYTDQQKEALERRVNRVSDESGKWEAQKVELEQRKKGLEATIQKLGQEISSLRSGYIQGSEQYQALQKLLEENQGTVRKWEQKREAQISRRDTMKEMQDDFDGFMLGVKEVLKASRKGTLHGVHGAVAELIRVPEHLEQAMETALGASVQHIVMENESVSRQAISFLKQRQLGRATFLPMDVIRPRQIGAGERQIVESAEGFVGIGADLVQYDDRYAGIVGSLLGNVVIARTLEDANRIAARCQYRYRVVTLEGDVVNAGGSMTGGSQFKKNANLLGRKRQLDQLDQDILDTEQQIARLRQSAIDTKRQLEETQTRLDELRQGGDVKRTEEQQMAMELKQLEHELRHVLEQVAASGQEKKGFDQEIKELEASRAEALVKLAALEEEEKKTHQAIHAAEFARKANESAKEQLQGELTNLKVREGKLDQERFSLEEQIRRLRGDYDTLGKDSRQNKTLLASIEADLLTNEQETVKQIENLNQYRLKKEEAAEQLEFKRAARSSLSKKLEVAENDTKEQRIQLKSVEELLRQTEIGVNRLDVELENVLKKLSDDYELSYELAKQRYPIPEDIEGTQSEVERLKRGISALGEVNLGAIEEYQRVHERYTFLDEQKSDLVEAKTTLYQVIREMDDEMSKRFKTTFDAIRREFGTVFSKLFGGGRADLVLLDPERLLETGIDIVAQPPGKKLQNLQLLSGGERALTAMALLFAILHVKPVPFCVLDEVEAALDEANVVRFAQYLREFSEQTQFIVVTHRKGTMEESDVLYGVTMEEGGVSKLVSVKLDNDEAEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB9</accession>
    <name>E3EGB9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase</fullName>
            <ecNumber evidence="2">2.5.1.145</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">lgt</name>
        <name evidence="4" type="ORF">PPSC2_00825</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) + L-cysteinyl-[prolipoprotein] = H(+) + S-1,2-diacyl-sn-glyceryl-L-cysteinyl-[prolipoprotein] + sn-glycerol 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:56712"/>
            <dbReference type="Rhea" id="RHEA-COMP:14679"/>
            <dbReference type="Rhea" id="RHEA-COMP:14680"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57685"/>
            <dbReference type="ChEBI" id="CHEBI:64716"/>
            <dbReference type="ChEBI" id="CHEBI:140658"/>
            <dbReference type="EC" id="2.5.1.145"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; lipoprotein biosynthesis (diacylglyceryl transfer).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the Lgt family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.145" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368791.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13815"/>
    <dbReference type="EnsemblBacteria" id="ADO54147">
        <property type="protein sequence ID" value="ADO54147"/>
        <property type="gene ID" value="PPSC2_00825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.153"/>
    <dbReference type="eggNOG" id="COG0682">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013386_0_1_9"/>
    <dbReference type="OMA" id="TDVPWAI"/>
    <dbReference type="OrthoDB" id="435911at2"/>
    <dbReference type="UniPathway" id="UPA00664"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008961">
        <property type="term" value="F:phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042158">
        <property type="term" value="P:lipoprotein biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01147">
        <property type="entry name" value="Lgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001640">
        <property type="entry name" value="Lgt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30589">
        <property type="entry name" value="PTHR30589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01790">
        <property type="entry name" value="LGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00544">
        <property type="entry name" value="lgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01311">
        <property type="entry name" value="LGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="51"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="94"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="180"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="210"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="239"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="268"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="308"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="337"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol)</name>
            <dbReference type="ChEBI" id="CHEBI:64716"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="351" mass="39713" checksum="DB08C66122934BCD" modified="2011-01-11" version="1">MSTATLLLNPIAFSIGAIKVHWYGLILGLAALVGLYLAIREGKRFGIPQEFFMDMLLLGVPSAIIGARIYYVAFKWEDYRDNLWDVFKIWNGGIAIYGALIGAIICAVIYFRYKGYNFWRIADICAPGLLIGQAIGRWGNFVNQEAYGGPTEETFLRNQLHLPDFIVNQMNVNGVFHHPTFLYESLWSIVGVILLLVIRRMKFVRAGEMFAFYFIWYSIGRFFIERVRTDSLAFQGPDWLASFVNALWSPMVWLGFEPGYLDPNYGNVRISQLLAIFIIVAAVIFILVRRRKGSAVARYSDPIVSSKTGIDQVPDVTPEQVSRPGQDAVSPTATVDKLSKEDTDEDKKEHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGF1</accession>
    <name>E3EGF1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein-export membrane protein SecG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">secG</name>
        <name evidence="10" type="ORF">PPSC2_00975</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in protein export. Participates in an early event of protein translocation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the SecG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368823.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13965"/>
    <dbReference type="EnsemblBacteria" id="ADO54179">
        <property type="protein sequence ID" value="ADO54179"/>
        <property type="gene ID" value="PPSC2_00975"/>
    </dbReference>
    <dbReference type="GeneID" id="66574769"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.183"/>
    <dbReference type="eggNOG" id="COG1314">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094156_6_1_9"/>
    <dbReference type="OMA" id="VTVMMQP"/>
    <dbReference type="OrthoDB" id="2024128at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015450">
        <property type="term" value="F:protein-transporting ATPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004692">
        <property type="entry name" value="SecG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34182">
        <property type="entry name" value="PTHR34182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03840">
        <property type="entry name" value="SecG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01651">
        <property type="entry name" value="SECGEXPORT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00810">
        <property type="entry name" value="secG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="53"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8065" checksum="68000EA662AF3700" modified="2011-01-11" version="1">MEIFLKVLLVVFSIAVIAVVLLQKGKSAGLSGAISGGAEHLFGKTKARGMDLILQRVTAVLGACFMIVSVLVAFFAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGH0</accession>
    <name>E3EGH0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-349</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-349</name>
        <name evidence="2" type="ORF">PPSC2_01075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368841.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0211"/>
    <dbReference type="EnsemblBacteria" id="ADO54198">
        <property type="protein sequence ID" value="ADO54198"/>
        <property type="gene ID" value="PPSC2_01075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.203"/>
    <dbReference type="eggNOG" id="ENOG50306XG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_289481_0_0_9"/>
    <dbReference type="OrthoDB" id="412340at1239"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011646">
        <property type="entry name" value="KAP_P-loop"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07693">
        <property type="entry name" value="KAP_NTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="KAP NTPase" evidence="1">
        <location>
            <begin position="54"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1059" mass="123510" checksum="6BF34DA7843D97C0" modified="2011-01-11" version="1">MIPCLNKDALKLLVGTADERYNYSPDYFQKTHFPQVMHRYHGNQLLEEITENELFKNLLEVDAEGNRVFFLFGSTGSGKSELLCWIKDKWQLHEVNRPVVRISRTELNPQVLIKKCYAAIGIPLGISIDETRWDLLLKKPITLINQIVWSTLSEILPTDEEIVPTALLIRPVIEKNVTEFILQVQNGRIKKPLEVLHQNQFDDLISNTTLQIPIDYSLLRKKLSQKLDQFLFEGKDIASLFKELTEQIKRMNIRPLLLIDDLVQSVNIYATDLLDQIITLEEGKWDVVIGLTPGVVRDTDKGFDLTQRIQNLDTITDRVKKLWLSDESGKDFYNLDRSQVSSYMSNYLVQLKASQGFACGNQCPHYWECKGYSISEEEEVDDEKIVQEVNLLPFNRHLIRRTFDAIPVGKGKLRYMILNSKEIIRFFQNGKREKISRVLPLVKREKFSDHPELFIKTYAEWYVPEEKDECLIPQKILRYFGYLDEEVKVSLNTLETKSEINSVLMTKGDPQQPNVVKSSVRDWVEGKKVNPELLDSVRLGVSSLIHEVVKGVNMSLPSTPRMTSTIQRRSVVNRTRYPITLDSKGTGIRSIVVKRGFAALQISNFQSLKYSEKARVFQQIANEYETARWIYNSEDIKRSWHCELEKGLGMSIDSFVYLLKNWAETCLEIGNARWSSEVQKQFHLTQDVLNLIEESYKDWHLLRDNLIRFPKSNGKRELAFEFDLWLESYQPVKELEQYQIGEESLYVFLLRLKNNYLTYLGLLDKYLKQKIQTAKGMLPFLLGSRNKKYLLHAERIRGFDVTTTYTLQDYLNYSEFEESLEQEGIMNRFSVNASLYRDVMDLSKQFESVCLEVEKQMGEFNKILSEDWSNDRPDWSKLSIEKEELIKTIDDLSMLIHCLSISRNAWTQVLRSNHVIDDVKLVKAIWARLVQTAKQLVRRKGANLDIQNNIVEWQSIDFYELKTRLEVMDIREFEQQNVIKHLKNDLGCEGVKSLDDLIMKIELNDDLRPSVKRHLKLLLEQGSTTLPPMQWKRLLDELKMRFPALFEVVEIRLVASGCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGL7</accession>
    <name>E3EGL7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydcN1</name>
        <name evidence="2" type="ORF">PPSC2_03415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369293.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16210"/>
    <dbReference type="EnsemblBacteria" id="ADO54656">
        <property type="protein sequence ID" value="ADO54656"/>
        <property type="gene ID" value="PPSC2_03415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.666"/>
    <dbReference type="eggNOG" id="COG1396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3837">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_085376_5_0_9"/>
    <dbReference type="OMA" id="ARESEPH"/>
    <dbReference type="OrthoDB" id="1069752at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="13"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="20939" checksum="92F65AAB5AA8C157" modified="2011-01-11" version="1">MMENINLILSKNLKHLRNERKLSLDKLADLTGISKTMLGQIERGESNPSITTVWKIANGLKISFTALISEPPADAVVVPKSKVQVLEESNHYRLYPFFPYEGNRNFEVYTVEIETGGELSSAPHREGTEEFITVFEGEMVVKVSEETYTVKAGDSIRFKADRPHIYYNLGETLVRMNMIIYYSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGM4</accession>
    <name>E3EGM4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore gernimation protein GerA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yndD1</name>
        <name evidence="4" type="ORF">PPSC2_03450</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369300.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16245"/>
    <dbReference type="EnsemblBacteria" id="ADO54663">
        <property type="protein sequence ID" value="ADO54663"/>
        <property type="gene ID" value="PPSC2_03450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.673"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021639_4_0_9"/>
    <dbReference type="OMA" id="QPGQDLK"/>
    <dbReference type="OrthoDB" id="576172at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004995">
        <property type="entry name" value="Spore_Ger"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03323">
        <property type="entry name" value="GerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005690">
        <property type="entry name" value="GerBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="323"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="365"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="488"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="47"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="53"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="562" mass="62923" checksum="64D109ECAABA489C" modified="2011-01-11" version="1">MWSKIISYLPSWSTLFQAGLALIIPLGIYYINTSIYSFVGSKGAKSKHSSSHPLSNKHNEGHMDQQHEPSSKITGNYDSDLQAIREAIGENSDVHFREFVVKKFHARSVLVFIEGMQDEKLMSKQVLEVLMFEGQQQGQDQQEQPEGISNSFIKESLMPLTQISEVTRMEELYEFILLGHTALLIEGMKEALLVGPPNGAIRSVNEPTSEALLRGPRIGFTEVLSENTSMLRRQGLNKSLELKKFQVGSRIKKDLVIAYIKDIVNPDLLEEVSRRISKIDMDFLPESGYVEQLIEDNYLSPFQQAHNTERPDRVINALLEGRIAILLDGTPFALIVPVTFSMLLQSPEDYYERWIPGTLLRLLRFSGAFIALMGPALYISFISFHPGLIPTKLVISIIGTRQGVPFPSVIEVMILEISIEILREAGIRLPKPIGPAMGIVGGLVIGDAAVNAGIVSPFLVIVVAVTAISSFSIPTYSAGITLRLLRFVGMFFAAMLGMFGTILFFLLICIHLTKLKSFGVPYVTPFSPMRLSDWKDLYIRAPMSLMKRRPVMMKTQQRKRRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGS9</accession>
    <name>E3EGS9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dppB</name>
        <name evidence="7" type="ORF">PPSC2_05720</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369795.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18700"/>
    <dbReference type="EnsemblBacteria" id="ADO55163">
        <property type="protein sequence ID" value="ADO55163"/>
        <property type="gene ID" value="PPSC2_05720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1169"/>
    <dbReference type="eggNOG" id="COG0601">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036879_0_0_9"/>
    <dbReference type="OMA" id="PDFWMGI"/>
    <dbReference type="OrthoDB" id="1479518at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="94"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="201"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="259"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="306"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="95"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="37042" checksum="BDA197EA974D4507" modified="2011-01-11" version="1">MNSYIVKRLAILIPVLLGMTLIVFSIIHAIPGDPAETILGDKATEQSKQALREQLGLDKPWLQQYGTYLSELARGDLGDSIRTRQPIAREMVPYLAATLELTVASMFFAVVVGMNAGIVSAWKRNSWFDYVSMVIALVGVSMPIFWLGLMEQWIFANKLHWLPSIGRMNSRDPVEAVTHLAVIDAFIGGRMDQVWTVIKHLILPSIALGTIPMAVIARITRSSMLEVMDADYIRTARAKGLASFQVVYKHALKNAAIPVLTVIGLQTGSLLGGAVLTETIFAWPGIGRYIFEAISSRDYPVIQSGILIIAFLFVIINLIVDLLYAVLDRRIRYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH10</accession>
    <name>E3EH10_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370197.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1593"/>
    <dbReference type="EnsemblBacteria" id="ADO55570">
        <property type="protein sequence ID" value="ADO55570"/>
        <property type="gene ID" value="PPSC2_07615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1575"/>
    <dbReference type="HOGENOM" id="CLU_2082522_0_0_9"/>
    <dbReference type="OrthoDB" id="773875at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="117" mass="13261" checksum="C76E99C1E8FCD41B" modified="2011-01-11" version="1">MKLKAVLLDTRSFEAMKAFYGSLLDLQVVEEGPSRLSFQVGESVLVFQESSHMENEFYHKKFAPLGDVEGSFIVTDKQRPWFPDDRLPAVFGISVLFEGTCSARLSLHKGLYELRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH25</accession>
    <name>E3EH25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_07675</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370212.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1608"/>
    <dbReference type="EnsemblBacteria" id="ADO55585">
        <property type="protein sequence ID" value="ADO55585"/>
        <property type="gene ID" value="PPSC2_07675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1590"/>
    <dbReference type="eggNOG" id="ENOG503078Q">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1487667_0_0_9"/>
    <dbReference type="OMA" id="TARYKNE"/>
    <dbReference type="OrthoDB" id="2054485at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168210" evidence="2">
        <location>
            <begin position="22"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="56"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="181" mass="20305" checksum="DEC94EBCFE9155D6" modified="2011-01-11" version="1">MKKAILLLLMIVVLIPSQVLAATSTKAMSTSEIEKLYFENYKDRVKEIKAAQKKLNAILGAEVRELTQRLNQATARYKNEVKNKSSKTVIAQAKADCDKLKKQLSVAKVELSKSIKNYKRESDQVLKDIAKQKAELIKFIKNHTAGKDKLTESQFSKQVNGEIMSIGNSFTEALKTLTEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH94</accession>
    <name>E3EH94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Thioredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yneN</name>
        <name evidence="4" type="ORF">PPSC2_09035</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370503.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21505"/>
    <dbReference type="EnsemblBacteria" id="ADO55885">
        <property type="protein sequence ID" value="ADO55885"/>
        <property type="gene ID" value="PPSC2_09035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1903"/>
    <dbReference type="eggNOG" id="COG0526">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042529_11_4_9"/>
    <dbReference type="OMA" id="RKMGRVH"/>
    <dbReference type="OrthoDB" id="1617952at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016209">
        <property type="term" value="F:antioxidant activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000866">
        <property type="entry name" value="AhpC/TSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00578">
        <property type="entry name" value="AhpC-TSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168453" evidence="2">
        <location>
            <begin position="30"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="68"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="23736" checksum="722134D31423240F" modified="2011-01-11" version="1">MKRFLFIRAIIVLVMVGSSWGIIANTVYSASLPVENAPLEEKYKGEKELDVEKNVGAESAAAEVIKRIKPGQQLPSMILKGLNGKSYDVGALRNKAMIISFWASWCDPCRLEAPMLNELYSKYKHDVDVYGINVTRYDRLEDVQKFSRSLALRFPILLDEQGALFEQFGGVAFPTHVTIDDHGRVREIIIGMLSERELECKIEALSKKIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHE0</accession>
    <name>E3EHE0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_10020</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370704.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2121"/>
    <dbReference type="EnsemblBacteria" id="ADO56093">
        <property type="protein sequence ID" value="ADO56093"/>
        <property type="gene ID" value="PPSC2_10020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2110"/>
    <dbReference type="eggNOG" id="ENOG5033BFA">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113290_0_0_9"/>
    <dbReference type="OMA" id="PQVQYSI"/>
    <dbReference type="OrthoDB" id="1656107at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003770">
        <property type="entry name" value="MLTG-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02618">
        <property type="entry name" value="YceG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="77"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="87"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="215" mass="22814" checksum="A88F1B38BE04CDD1" modified="2011-01-11" version="1">MIKNRSFMLGMGTGLIMGALLLQLAIIGQGQSQQSSTDPKNMTREQLEKAAAELNLQISDSSDPKMTEEEWRNKLIKEGNKTPVAPQKAKPAQTPSTPKVPANSTSSAASKPSTSTSVPQSPNKPQTQRAGTITTPDIPKQPATPQVQYSIASGSNLRSVASGLERAGVVSDASAFEAAAKAKKINTKIRTGTYQFAKGEDFSSIITKITKKPSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHI6</accession>
    <name>E3EHI6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">XRE family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_10225</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370748.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22695"/>
    <dbReference type="EnsemblBacteria" id="ADO56139">
        <property type="protein sequence ID" value="ADO56139"/>
        <property type="gene ID" value="PPSC2_10225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2154"/>
    <dbReference type="eggNOG" id="COG1426">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047530_0_1_9"/>
    <dbReference type="OMA" id="QEMTKIR"/>
    <dbReference type="OrthoDB" id="2071222at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025194">
        <property type="entry name" value="DUF4115"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13464">
        <property type="entry name" value="DUF4115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="HTH cro/C1-type" evidence="3">
        <location>
            <begin position="8"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="131"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="322"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="364" mass="38232" checksum="5D001AF4B69F64E5" modified="2011-01-11" version="1">MSELGQQLKEARLQKGLSLDDVQEMTKIRKRYLEAIETGDYKVLPGSFYVRAFIKTYAETVGLNPDELLEGHQSNVPEPEPEAVMEPVTQKRSSRPATIGNLKWLPTALMWLFLVLIVGVIYAYWVSNNHSTPKTAENTTPITTPSTPSTTPNTTPSTTPNTSTPNTTTTPNNGQTTAPNGAGGQTPDTGKTGETQPGGTGTTDATTPNTGQQPDTTTPAQGVTVAQDGKQGKTTIFKVSSATGATVKVDIKATGESWLEVYKGQNSRGEKLSYGMTKSGDAMSFDIGPEGLYIKSGRSSATDISVAGQPITDNKSTTRVLIQQGEASSTGASSGVTGSTDTTTNGSTDTTQSGTDSSTTTDGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ9</accession>
    <name>E3EHZ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yclJ</name>
        <name evidence="8" type="ORF">PPSC2_11840</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371096.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24165"/>
    <dbReference type="EnsemblBacteria" id="ADO56491">
        <property type="protein sequence ID" value="ADO56491"/>
        <property type="gene ID" value="PPSC2_11840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2507"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OMA" id="DVHINHL"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="3"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="130"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="130"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="26308" checksum="7991F109A1A3A0E4" modified="2011-01-11" version="1">MSNVLIIEDDNMLGDTLSLYLTGEGYNVTRVELATEGIALLDKEQPDIILLDLLLPDLDGVNPCPLIRKHTDVPIIVISTENNISERIRTLTLGADDYICKPFSMQELKARIEALFRRIKITRLQGRNTSPEAEPENGISLDLARRMVIVNGQMVEMTYSEFELMKLFYSNRGIVFSRYALIQALRGTDSFINERAVDVHINHLRRKIEKDPKKPQLIKTIWGIGYKFMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI00</accession>
    <name>E3EI00_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 10">Diaminobutyrate--2-oxoglutarate transaminase</fullName>
            <ecNumber evidence="6 10">2.6.1.76</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">DABA aminotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ectB</name>
        <name evidence="11" type="ORF">PPSC2_11845</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 10">Catalyzes reversively the conversion of L-aspartate beta-semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>2-oxoglutarate + L-2,4-diaminobutanoate = L-aspartate 4-semialdehyde + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:11160"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58761"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="2.6.1.76"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 10">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4 10">Amine and polyamine biosynthesis; ectoine biosynthesis; L-ectoine from L-aspartate 4-semialdehyde: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 9">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.76" evidence="6 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371097.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24170"/>
    <dbReference type="EnsemblBacteria" id="ADO56492">
        <property type="protein sequence ID" value="ADO56492"/>
        <property type="gene ID" value="PPSC2_11845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2508"/>
    <dbReference type="eggNOG" id="COG0160">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016922_10_0_9"/>
    <dbReference type="OMA" id="ELDQWKP"/>
    <dbReference type="OrthoDB" id="386839at2"/>
    <dbReference type="UniPathway" id="UPA00067">
        <property type="reaction ID" value="UER00121"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045303">
        <property type="term" value="F:diaminobutyrate-2-oxoglutarate transaminase activity"/>
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        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047307">
        <property type="term" value="F:diaminobutyrate-pyruvate transaminase activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019491">
        <property type="term" value="P:ectoine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004637">
        <property type="entry name" value="Dat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012773">
        <property type="entry name" value="Ectoine_EctB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43552">
        <property type="entry name" value="PTHR43552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43552:SF2">
        <property type="entry name" value="PTHR43552:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00709">
        <property type="entry name" value="dat"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ectoine_ectB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0032">Aminotransferase</keyword>
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    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00008954"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00013155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00014798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU365034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="420" mass="46547" checksum="9E1F9067F7754803" modified="2011-01-11" version="1">MNTFETLESNVRSYCRSFPVVFNKAKNDVLYTEAGEGYIDFFAGAGALNYGHNNDFMKNRLLDYLTSDRIMHGLDMYTTAKQEFMESFSERILQPKGLNYKLQFCGPTGTNAVEAALKLARKVKKRNGVFAFMGGFHGMSLGSLSITSNNSMRESAGVPLNNVTFIPYNSMFNGMDTILYMEQLLTDTHSGVEKPAAIILETVQAEGGINIADNEWLRELRQLCDDHDILLIVDDIQVGCGRVGSFFSFERAGIVPDMVVLSKSISGYGLPMSLLLLKPELDIWSPGEHNGTFRGNQLAFVGAKAALEFRDTVGLEAQVKEKEAFVQQFLREHIQKMDPLIEIRGLGLIWGIDVTHLGEAFAKEVATLCFSKGLIIERAGRNDTVLKIMPALTISMENLSKGCNIIKESMAQVTSNLVTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI31</accession>
    <name>E3EI31_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_03620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54699.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040102168.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54699">
        <property type="protein sequence ID" value="ADO54699"/>
        <property type="gene ID" value="PPSC2_03620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.709"/>
    <dbReference type="HOGENOM" id="CLU_1915004_0_0_9"/>
    <dbReference type="OrthoDB" id="2070332at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54699.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="132" mass="14875" checksum="F630CB368F37E677" modified="2015-05-27" version="2">MFLTILTYSIQAIVILLIIFTLVRKNRKKIGRGSLSLLLLLLGLAASYELDNYTFGDQLFSFLGLPAWSNRVDNTGFHYSLLLSSIFFIPGIIIGYKNPEDFGALIGRRVSSIYLFLIIISLLFFIISCLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIA1</accession>
    <name>E3EIA1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">bcrB3</name>
        <name evidence="7" type="ORF">PPSC2_05960</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369846.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18925"/>
    <dbReference type="EnsemblBacteria" id="ADO55214">
        <property type="protein sequence ID" value="ADO55214"/>
        <property type="gene ID" value="PPSC2_05960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1220"/>
    <dbReference type="eggNOG" id="COG1277">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050687_0_1_9"/>
    <dbReference type="OMA" id="NEHMKLF"/>
    <dbReference type="OrthoDB" id="1745385at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032688">
        <property type="entry name" value="ABC2_membrane_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12679">
        <property type="entry name" value="ABC2_membrane_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="102"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="231"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="29250" checksum="761B8DA1239D255C" modified="2011-01-11" version="1">MADFFKLVHNENLKIYLRVRTWIMLGLLAVITAVIPMLISLVSDQVSVWDGIALTTLFTFFLNTTFTVIVAADSVAGEFTWGTIKLLLIRPWTRSKILLSKYISVILFSLLGTIVLVLMVTLSSWLMLSKDAPAGSVPLFSDPVSYVTLNFLYSYIALFVTMAFAFMLSAVFRSSALAIGLSLFMMFTKTVYNSIGLFSTDRFEWTQYVLFTHMDLKKYLDMPPGTVTSDLTFSLTVLAAYYVVFIAIAWVVFVKRDVST</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIA8</accession>
    <name>E3EIA8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA polymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ykoU</name>
        <name evidence="1" type="ORF">PPSC2_05990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369853.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18955"/>
    <dbReference type="EnsemblBacteria" id="ADO55221">
        <property type="protein sequence ID" value="ADO55221"/>
        <property type="gene ID" value="PPSC2_05990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1227"/>
    <dbReference type="eggNOG" id="COG3285">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008325_1_1_9"/>
    <dbReference type="OMA" id="TTAWWKE"/>
    <dbReference type="OrthoDB" id="2061599at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014145">
        <property type="entry name" value="LigD_pol_dom"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02778">
        <property type="entry name" value="ligD_pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33716" checksum="87A129D790028AB2" modified="2011-01-11" version="1">MGRAVKGTITIEGHEIAITNPDKPLWPEAGVTKALYLRKLAVLAPFLLKYCHQRLLTVIRWPHGIHGDFFYQKNAPHPRPDYIETALHDGIEYIVLGKLPQLLWLGNQAALEFHPSLHLAGSQLPCEWMIDLDPSREVEPRIMEAASIVGEVLASLGLDSVPKTSGATGVQIIVPIRPGITFDELRSIGLLVGQFVTEKHPHLFTLERLKKDRGTAIYFDYLQHYQGKTLAAPYTPRARPGATVSTPLTWEEVRQDVSPLDYHLLNIEERLNQIGDLIDKVPPQPVEDLLKHMRSKTHPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIR1</accession>
    <name>E3EIR1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mmbP</name>
        <name evidence="2" type="ORF">PPSC2_09245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370547.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21715"/>
    <dbReference type="EnsemblBacteria" id="ADO55930">
        <property type="protein sequence ID" value="ADO55930"/>
        <property type="gene ID" value="PPSC2_09245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1948"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_10_5_9"/>
    <dbReference type="OMA" id="TFMFRGG"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168468" evidence="1">
        <location>
            <begin position="31"/>
            <end position="447"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="447" mass="50273" checksum="A394CF850E87784A" modified="2011-01-11" version="1">MTKKKGFALTMVVLLLMVAALAGCSGGSSSSDGSKELTFMFRGGTDEQKAYKDVIKKFEEEHPGVKVKMVVTAADQYATKLRAAITGNNLPDIFYFAPGDLKAYVNSGVLKDLTPYIDKSKDINLDNIWKYGVDLYRYDGKMAGQGNIYGMPKDLGPFALGYNKTMFEKAGVPLPDKDKPYTWDEFIKVNQELTKDTNGDGKPDQYGTGFNVQWALQAFVWSNGADWLDESKTKVTIDDPKFAEALQFFADMQNKYKITPGIEQSQTLDTYQRWMKGEMAFFPVGPWDMSTFEKLPFEYDLLPFPTGSTGKPATWIGSLGIGVSSKTKYPDEAVELVNYLTTSKEGMKQLVDAKVQIPNLLDMADEWAKDTKTKPNNKQEFIDIVNDYGRSLPGNYTYNAEWYDIFFTDIQPVLDGKITAADYVKQEQPKMQKLLDKAVEQEKKSQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIV0</accession>
    <name>E3EIV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alpha-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gaa</name>
        <name evidence="4" type="ORF">PPSC2_09420</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glycosyl hydrolase 31 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370586.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21890"/>
    <dbReference type="CAZy" id="GH31">
        <property type="family name" value="Glycoside Hydrolase Family 31"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55969">
        <property type="protein sequence ID" value="ADO55969"/>
        <property type="gene ID" value="PPSC2_09420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1987"/>
    <dbReference type="eggNOG" id="COG1501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000631_10_0_9"/>
    <dbReference type="OMA" id="QGVDCFK"/>
    <dbReference type="OrthoDB" id="469334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000322">
        <property type="entry name" value="Glyco_hydro_31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025887">
        <property type="entry name" value="Glyco_hydro_31_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13802">
        <property type="entry name" value="Gal_mutarotas_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01055">
        <property type="entry name" value="Glyco_hydro_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="SSF74650"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gal_mutarotas_2" evidence="3">
        <location>
            <begin position="157"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="774" mass="86709" checksum="09D5F4B4D098AF1C" modified="2011-01-11" version="1">MKFTDGYWLVRKGYEIQNPADIRDIVTDDASMTVYAATHRIEHKGDTLNGALLKATYSSPMPNVIRVRLNHHKGRVHHGPDFEIHTLPTEVAITVGEDVAVLKSGDLSVRVGRGKSWDVGFYVKDRKVTGSGHRGPGYITDPQDQPFFREQLELGMGEYVYGLGERFTPFVKNGQVVDIWNEDGGTSSEQAYKNIPFYLSNKGYGVFVNHPEKVSYEIASENVSKVQFSVSGESLEYFIIGGANPKEVLDNYTKLTGKPALPPAWTFGLWLTTSFTTDYDEATVNHFVDGMAERDLPLSVFHFDCFWMKEYQWCDFQWDQDMFPDPEGMLQRLKAKGLKICAWINPYIAEKSILFDEGMENGYLVKTADGSVWQWDMWQAGMGLVDFTNPAAVAWYQDKLKVLIDQGVDCFKTDFGERIPTDVVYYDGSDPMKMHNYYTHLYNKAVFDVLEEKLGKNEAALFARSATAGGQQFPVHWGGDCSSTYESMAESLRGGLSLGLSGFGFWSHDISGFELTAAPDLYKRWVQFGLLSSHSRLHGNVSYRVPWLFDEESVDVVRSFTKLKCSLMPHLYAAAVESSVKGLPMMRAMVLEFPQDPTCATLDLQYMLGDSILVAPIFNKEGNVQYYVPEGQWTNLLTNEIVSGGRWVNEQHDFTTLPVLVKPNTLLAIGHEDRRPDYDYADQVALHLFELGEGQQARTVIVNTSGEEELTVTASRKDSVITVKAEGAVKPWSLVLRGIHEAVQVKEGTSLAGEQGLIITPASSGQQELTIHLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ43</accession>
    <name>E3EJ43_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Conjugal transfer protein TraR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yteA1</name>
        <name evidence="7" type="ORF">PPSC2_10595</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370830.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22990"/>
    <dbReference type="EnsemblBacteria" id="ADO56224">
        <property type="protein sequence ID" value="ADO56224"/>
        <property type="gene ID" value="PPSC2_10595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2239"/>
    <dbReference type="eggNOG" id="COG1734">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043144_1_1_9"/>
    <dbReference type="OMA" id="NYDNHPG"/>
    <dbReference type="OrthoDB" id="1932026at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037187">
        <property type="entry name" value="DnaK_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014240">
        <property type="entry name" value="YteA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000962">
        <property type="entry name" value="Znf_DskA_TraR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01258">
        <property type="entry name" value="zf-dskA_traR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109635">
        <property type="entry name" value="SSF109635"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02890">
        <property type="entry name" value="bacill_yteA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51128">
        <property type="entry name" value="ZF_DKSA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DksA C4-type" evidence="6">
        <location>
            <begin position="54"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="dksA C4-type" evidence="4">
        <location>
            <begin position="97"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="167"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="21213" checksum="61BBC954E914AC26" modified="2011-01-11" version="1">MNHLNDSQLAELKHMLLEQKNDLEKHFKQNGQENTQLGETLTDSTGELSSYDNHPADIGTETFERSRDLAINESLENELEQVNAALKRMKDGTYGICVESGEEIPFERLQAIPYTAYTVEHTPTRELSNDRPIEEQVMTPPPKGAGEVHQRNAGRFDDAGAWDAVEKYGTSNSPATAAKRDVTDYDENM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ64</accession>
    <name>E3EJ64_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370851.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23070"/>
    <dbReference type="EnsemblBacteria" id="ADO56245">
        <property type="protein sequence ID" value="ADO56245"/>
        <property type="gene ID" value="PPSC2_10675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2261"/>
    <dbReference type="eggNOG" id="ENOG503396B">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_124423_0_0_9"/>
    <dbReference type="OMA" id="DPIEWYE"/>
    <dbReference type="OrthoDB" id="2053023at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168241" evidence="1">
        <location>
            <begin position="28"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="18886" checksum="CB6CD68595DF76FC" modified="2011-01-11" version="1">MMKLASKWTVLTLMMMLITTAGATAQGYTPVADAENQETVYINEMDIRDGQIYLSADPIEWYEGAAADKAFVEHEGNTGLDGAPDGYYIVNNSVQNDVYQVAPDASVEVQIYDHTGNIEDTDVQWNESIPLAQFEKDFAKKDVLDLSQFPYHVTLRDGKVVKIVQQFIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ76</accession>
    <name>E3EJ76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl transferase family 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370968.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2391"/>
    <dbReference type="EnsemblBacteria" id="ADO56363">
        <property type="protein sequence ID" value="ADO56363"/>
        <property type="gene ID" value="PPSC2_11235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2378"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1146338_0_0_9"/>
    <dbReference type="OMA" id="HYDNIAD"/>
    <dbReference type="OrthoDB" id="1379602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="28559" checksum="0B06853B29EEF353" modified="2011-01-11" version="1">MIIHVYALCWNEEKMLPFFFKHYDNIADQYYIFDNDSTDNSISMLKAHPKVNMNRFEIEGNSVVRSAQDLFNQCWKESRNKADWIIICDVDEHFYHPNLRTYLQECTSKGITLIVPNGYEMVSDFFPNSQQPLYETVRNGVRSQTYDKPQIFNPSAIQEINFSPGRHTAEPAGNVIKPSNNEVLLLHYKYLGFDYLNSRFSALKQGLREGDTTNRWGFHYLWDENQKMEQFKDLKNRSVRVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJD0</accession>
    <name>E3EJD0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Endospore coat-associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yheD5</name>
        <name evidence="2" type="ORF">PPSC2_11500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371022.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23865"/>
    <dbReference type="EnsemblBacteria" id="ADO56417">
        <property type="protein sequence ID" value="ADO56417"/>
        <property type="gene ID" value="PPSC2_11500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2431"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_2_0_9"/>
    <dbReference type="OMA" id="SYWRLAN"/>
    <dbReference type="OrthoDB" id="1740489at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="253"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="287" mass="33257" checksum="C8DDB17B6C363AEA" modified="2011-01-11" version="1">MNSSQAQALRSKWHKTQLLLQHGSIKPFVPETRKYSKANVKSMLEKYGMVYVKPERGTFGKGVMKVEQEAGQRFAYQYEEKRLEFKHLDALITSLSKHTGKKSYLIQKGIHLLRHQNRYFDIRIMVQRNAKGSWESTGIIGRLGHPRKIVTNYHSGGKPMALEQLLQSHLSQSKQAELVNKLNELGITIATQLQKTYPKFRQIGVDIGLDHRFIPWIIEVNTKPDPYIFNQLTDKSMYRKVISYWRLANEKKKVTVPSKDKKNNNKNKDKVANKVDHTNKEPKSKKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJU4</accession>
    <name>E3EJU4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386106.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59692">
        <property type="protein sequence ID" value="ADO59692"/>
        <property type="gene ID" value="PPSC2_26670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5633"/>
    <dbReference type="HOGENOM" id="CLU_1833226_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="16527" checksum="603D1EE02AA47EF0" modified="2011-01-11" version="1">MKNVFDFDLNYDFREVRELMIKEKLSEEELMEGLEAEEVFVKVCITDHVYNRMNNSFGRQCNWEMIEDLILEKGHLLFELKFDEEFAMKNSDGTLALICKLYPHNGELVLILETVIRTVIIINGKEVDKQVKVYRSTKTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKA3</accession>
    <name>E3EKA3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_27910</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385844.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0036"/>
    <dbReference type="EnsemblBacteria" id="ADO59430">
        <property type="protein sequence ID" value="ADO59430"/>
        <property type="gene ID" value="PPSC2_27910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5914"/>
    <dbReference type="eggNOG" id="COG0629">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078758_6_2_9"/>
    <dbReference type="OrthoDB" id="1942216at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04496">
        <property type="entry name" value="SSB_OBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000424">
        <property type="entry name" value="Primosome_PriB/ssb"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00436">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50935">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="127"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="19690" checksum="76DDDE8186D67FE4" modified="2011-01-11" version="1">MLITQTIRREVKGEMKDVKVLFGSGRLSNDPPEITEVGENKTKVMRGDKNHPFAIAIPDPSMGKYDNGRFKPKYYNCELWGKNAENLAKLGYKGQKIEVFGRLKTHTYNGKEYENLTIERFELLEMRPKNDHESSKTAENGGDRDANAGATQNEENPFYDGKPIEISDDDIPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKD3</accession>
    <name>E3EKD3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385874.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0066"/>
    <dbReference type="EnsemblBacteria" id="ADO59460">
        <property type="protein sequence ID" value="ADO59460"/>
        <property type="gene ID" value="PPSC2_27765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5883"/>
    <dbReference type="HOGENOM" id="CLU_896189_0_0_9"/>
    <dbReference type="OrthoDB" id="2150658at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="284"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="36253" checksum="3ABF3C5F80AD8496" modified="2011-01-11" version="1">MIYLIFFMVWAGVILSLLLQTKSKKRLPTSDIAFESPFYHVVYRMSFGIPFKWFVEDDRNLTNKGRKTEQLLIQSGYHKKFTVQSFMAFKVLVFFTSILLIFITLGLIDKLPSLFHWLLQVDTTRISKEGVSLDMILITSILYLSFSLFPGIILRQKAKKELVNSNKDLPILHMFTILMLRSNKTVTEILFALTKLNSYHKKVFERGYLMYLRNKHEGMEYLRSQFDNARFIEMFNLLEDIGTYAREECISIMDSNMKSLVHETNTLKRRNDITRLVYSEASMVVPFSAIILLGAAPIVIAGLRMFSLSTVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKI6</accession>
    <name>E3EKI6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386232.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59818">
        <property type="protein sequence ID" value="ADO59818"/>
        <property type="gene ID" value="PPSC2_26085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5489"/>
    <dbReference type="HOGENOM" id="CLU_478846_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="569" mass="63837" checksum="B55019B1142138BB" modified="2011-01-11" version="1">MNTKSIEINFGATADAEGKIHDKKDVTLNNLVSGSIYQYTFKTTVNRQDNDDHYLSIDIMGDNIDLEAVTQSNTEVTICTSNSPRLFISEGVKIFELEGTDYKDGDIVTVKLVIEFVSSDIQFLTNEVLLQSKKDKISNPICVGISDHILNFFTTDGLGVKTFPLDNQGIKNISMRPASPFDFKIIASSMLIELKVQVQINFWHENELCCSALLSSEIGLSPKMVTSTNDSLGFKIENAVVNEEILYPYYDKDKIINYFQSEQAIADTMVIISREIVSLDPNSKYSFASLANNLSLPNIWQTFSGFRVHFERFDYRIGYINNESVGFLFVVFSIESLHLPSPCSYLKNNNIESTLVNQTRSLFKDWNQDNCKPLTNWITLGFSHSSLNEIVEPFANQGMEERQTIHGRPVSGELYYYFRSRFDSLQINPTSLTLDLRIVDTGGKIEASIGSGCTKITGSVSISLIFEGIHAAVKIKRMNKFFVLTPEIAIDKISVQVGNTPHPVDQIIGKILTDFSEGPIRVGIALVMMKQHEIPLFLGEYSGIVYSLVKADYFENESFVLTVDANIPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKM9</accession>
    <name>E3EKM9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386275.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0472"/>
    <dbReference type="EnsemblBacteria" id="ADO59861">
        <property type="protein sequence ID" value="ADO59861"/>
        <property type="gene ID" value="PPSC2_25885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5438"/>
    <dbReference type="HOGENOM" id="CLU_2331130_0_0_9"/>
    <dbReference type="OrthoDB" id="2189553at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="98" mass="11330" checksum="899485CF850B425D" modified="2011-01-11" version="1">MHNDDLSQTFIEMIDTRVIVQSGNNPVCIVPNDEFNLKIHQDIPYLTLQDIADQLEARCKGRDFLVDVWEEGGLSGTIYRYNNMDKKWRKHGTTKGFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKS4</accession>
    <name>E3EKS4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">Signal peptidase I</fullName>
            <ecNumber evidence="4 7">3.4.21.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PPSC2_27470</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="10 11">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
            <plasmid evidence="10 11">pSC2</plasmid>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins.</text>
            <dbReference type="EC" id="3.4.21.89"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Membrane</location>
            <topology evidence="8">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the peptidase S26 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.89" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59525.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0131"/>
    <dbReference type="EnsemblBacteria" id="ADO59525">
        <property type="protein sequence ID" value="ADO59525"/>
        <property type="gene ID" value="PPSC2_27470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5814"/>
    <dbReference type="eggNOG" id="COG0681">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028723_5_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000223">
        <property type="entry name" value="Pept_S26A_signal_pept_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019758">
        <property type="entry name" value="Pept_S26A_signal_pept_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019757">
        <property type="entry name" value="Pept_S26A_signal_pept_1_Lys-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019756">
        <property type="entry name" value="Pept_S26A_signal_pept_1_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43390">
        <property type="entry name" value="PTHR43390"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10502">
        <property type="entry name" value="Peptidase_S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00727">
        <property type="entry name" value="LEADERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02227">
        <property type="entry name" value="sigpep_I_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00501">
        <property type="entry name" value="SPASE_I_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00760">
        <property type="entry name" value="SPASE_I_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00761">
        <property type="entry name" value="SPASE_I_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5 7" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S26" evidence="9">
        <location>
            <begin position="21"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="42"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR600223-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF10502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO59525.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="170" mass="19651" checksum="1ED0AE4086EC998B" modified="2015-05-27" version="2">MELFDHRFFTEVWKKDRRVVRTAVMLVILFHFFSIGIVPSESMAPTLEPDDLVLYVNTKHVTRGDIVFFTYPLDEKLKYVKRIIGLPGDEVEVKNQAVYVNGKPLEENYLLEQPLYTFSKAIVPEGYYFVLGDNRNNSEDSTHWGFLKADNVNGKAIGVLLPFSKFKIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL51</accession>
    <name>E3EL51_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386027.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0220"/>
    <dbReference type="EnsemblBacteria" id="ADO59613">
        <property type="protein sequence ID" value="ADO59613"/>
        <property type="gene ID" value="PPSC2_27080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5726"/>
    <dbReference type="HOGENOM" id="CLU_2207445_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="12327" checksum="358C46600C3C2B59" modified="2011-01-11" version="1">MKKELKVNETIVQVEETKQKMTTIYIETSDADIYVNGVLLWQRYKDPKFAKIPPLFRSFVADKTDYPDETGDGKIAADLHMKGFKTSASFYFPKNASFTYPCTDGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELC8</accession>
    <name>E3ELC8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59960.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0571"/>
    <dbReference type="EnsemblBacteria" id="ADO59960">
        <property type="protein sequence ID" value="ADO59960"/>
        <property type="gene ID" value="PPSC2_28375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6018"/>
    <dbReference type="eggNOG" id="ENOG5034BY6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1494851_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="32"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59960.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="20831" checksum="094C7E3455169C29" modified="2015-05-27" version="2">MYQKENPLKYLSRGIKVSRFRKTKKQIRNRVLYAILLSKDIKLSDLAKNVGVSSRGVNGWVMGAQPNDHNMSKLCDFLNYPHHILFNEEIVNRSPIICIPSRSKYYKRVVAVSPAQNNVLHGLLVLYDISLGDFATWLDLGPATIRKYIHRKCLPDPQIQKRMADFFRIPANILFYDALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCG7</accession>
    <name>A0A0D5ZCG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine protein kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025678551.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3076"/>
    <dbReference type="EnsemblBacteria" id="AKA44266">
        <property type="protein sequence ID" value="AKA44266"/>
        <property type="gene ID" value="PPSC2_14400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3074"/>
    <dbReference type="eggNOG" id="COG0515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100878_0_0_9"/>
    <dbReference type="OrthoDB" id="997658at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ABC1" evidence="1">
        <location>
            <begin position="52"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="22134" checksum="18D63CAEC8D3E482" modified="2015-05-27" version="1">MTVFNIQVYPGVHRPGSPYEVQWCNPAGLPFLGAGAQGAVFQLSTTTCVKVYANEFDTQQEADSLLRASSASFVPQVYEVGQNYIIMEFIQGQGIKAFLSVQQSFPSFLAKGLLTILYEMKRVGFTRIDTALRHVYVTPEEQIKVIDHVNSYRTVQPYPARMLSSLANIGYLAPFIHYVKREDPAIYTEWNQASIIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCP5</accession>
    <name>A0A0D5ZCP5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0457"/>
    <dbReference type="EnsemblBacteria" id="AKA44336">
        <property type="protein sequence ID" value="AKA44336"/>
        <property type="gene ID" value="PPSC2_25945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5456"/>
    <dbReference type="HOGENOM" id="CLU_2937331_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="7530" checksum="C1F5E3D21D7D78EB" modified="2015-05-27" version="1">MLKIAKIMNWRQRGDVEMLRRFNPWNQKEYTEWYHFIWLMPLFTLILTCVWGLAWLRVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E469</accession>
    <name>E3E469_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Beta-glucanase</fullName>
            <ecNumber evidence="3">3.2.1.73</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">1,3-1,4-beta-D-glucan 4-glucanohydrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Endo-beta-1,3-1,4 glucanase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Lichenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">exoK</name>
        <name evidence="12" type="ORF">PPSC2_12390</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in beta-D-glucans containing (1-&gt;3)- and (1-&gt;4)-bonds.</text>
            <dbReference type="EC" id="3.2.1.73"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 16 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.73" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371213.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2640"/>
    <dbReference type="CAZy" id="GH16">
        <property type="family name" value="Glycoside Hydrolase Family 16"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56609">
        <property type="protein sequence ID" value="ADO56609"/>
        <property type="gene ID" value="PPSC2_12390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2628"/>
    <dbReference type="eggNOG" id="COG2273">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071026_1_0_9"/>
    <dbReference type="OMA" id="WYVSDGW"/>
    <dbReference type="OrthoDB" id="1046649at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042972">
        <property type="term" value="F:licheninase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044791">
        <property type="entry name" value="Beta-glucanase/XTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008264">
        <property type="entry name" value="Beta_glucanase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000757">
        <property type="entry name" value="GH16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008263">
        <property type="entry name" value="GH16_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31062">
        <property type="entry name" value="PTHR31062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00722">
        <property type="entry name" value="Glyco_hydro_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00737">
        <property type="entry name" value="GLHYDRLASE16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01034">
        <property type="entry name" value="GH16_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51762">
        <property type="entry name" value="GH16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003167995" description="Beta-glucanase" evidence="10">
        <location>
            <begin position="26"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="domain" description="GH16" evidence="11">
        <location>
            <begin position="28"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="26979" checksum="EDBDDED404C7825E" modified="2011-01-11" version="1">MKKKYWFTLVITGIVSLFFSVSAFAANVFWEPLSYYNPSTWQKADGYSNGDMFNCTWRANNVNFTNDGKMKLSLTSSAYNKFDGGEYRSKNTYRYGLYEVNMKPAKNTGIVSSFFTYTGPANGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVVDLGFDASSGFHTYAFDWQPGYIKWYVDGVLKHTATTNIPKTPGQIMMNLWNGTGVDSWLGPYNGVNPLYAEYDWVKYTSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4E5</accession>
    <name>E3E4E5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplC7</name>
        <name evidence="7" type="ORF">PPSC2_12735</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371289.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00145"/>
    <dbReference type="EnsemblBacteria" id="ADO56685">
        <property type="protein sequence ID" value="ADO56685"/>
        <property type="gene ID" value="PPSC2_12735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2708"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="IWIGYAN"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="144"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="186"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="263"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="78"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="298" mass="33479" checksum="A09F06B1E7BCC59E" modified="2011-01-11" version="1">MNQLLKRKSKGDLWFDIINYVMLTIVMLLVLFPLYFVLIASLSDPNLIYSGEVWFFPKGFTLDGYGRIFSDSSIWIGYANSILYASLGTLIGVAVTVCAAYPLARKGLAGKPVIMWFLLISMFFSGGLIPTYLLIKDLHMLNTIWALVIPGAGGVFNVIIVRTFFQSTIPDEMWEAASIDGCSNTRFFWSIVLPLSKSVIAVMVLYHVVGFWNGFFDALIYLNDESKYPLQLVLRNILVQNQANSSMMIDVESYAAKMRVTELIKYGVIMVSSLPLLILYPFLQKYFVKGVMIGSIKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X2</accession>
    <name>E3E4X2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glycerol-3-phosphate dehydrogenase [NAD(P)+]</fullName>
            <ecNumber evidence="8">1.1.1.94</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">NAD(P)H-dependent glycerol-3-phosphate dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 17" type="primary">gpsA</name>
        <name evidence="17" type="ORF">PPSC2_14700</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>NAD(+) + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:11092"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.94"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 13">
            <text>NADP(+) + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:11096"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.94"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8 14">Membrane lipid metabolism; glycerophospholipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8 14">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 12">Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.94" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371696.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02335"/>
    <dbReference type="EnsemblBacteria" id="ADO57100">
        <property type="protein sequence ID" value="ADO57100"/>
        <property type="gene ID" value="PPSC2_14700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3137"/>
    <dbReference type="eggNOG" id="COG0240">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033449_0_2_9"/>
    <dbReference type="OMA" id="NRMFGNM"/>
    <dbReference type="OrthoDB" id="1419877at2"/>
    <dbReference type="UniPathway" id="UPA00940"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009331">
        <property type="term" value="C:glycerol-3-phosphate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004367">
        <property type="term" value="F:glycerol-3-phosphate dehydrogenase [NAD+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046167">
        <property type="term" value="P:glycerol-3-phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046168">
        <property type="term" value="P:glycerol-3-phosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006650">
        <property type="term" value="P:glycerophospholipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00394">
        <property type="entry name" value="NAD_Glyc3P_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006168">
        <property type="entry name" value="G3P_DH_NAD-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006109">
        <property type="entry name" value="G3P_DH_NAD-dep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011128">
        <property type="entry name" value="G3P_DH_NAD-dep_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07479">
        <property type="entry name" value="NAD_Gly3P_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01210">
        <property type="entry name" value="NAD_Gly3P_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000114">
        <property type="entry name" value="Glycerol-3-P_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00077">
        <property type="entry name" value="GPDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00957">
        <property type="entry name" value="NAD_G3PDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4 8 11" id="KW-0520">NAD</keyword>
    <keyword evidence="3 8 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 8 14" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_Gly3P_dh_N" evidence="15">
        <location>
            <begin position="4"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="NAD_Gly3P_dh_C" evidence="16">
        <location>
            <begin position="181"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="256"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8 9">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <begin position="9"/>
            <end position="14"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <position position="256"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="282"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000114-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000114-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000114-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU004280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF01210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF07479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO57100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="346" mass="36942" checksum="5CD59AFF6137023F" modified="2011-01-11" version="1">MSEKIAVLVAGSWGTALASVLATNNNDVSVWTRSEQQAAEINEKHTNEHYLPGSILSDRISATTDMQTAVSGAKAVIIVSPSSAARQVARSLKAHFTKDMLVVHAIKGFETETLKRMSTVISEELEIAEDDIAVLSGPSHAEEVVKKCPTTVVVASSNEKAAQAAQGLFMNSYFRVYTNRDLLGVELSGALKNIIALGAGMSDGLGFGDNAKAALLTRGLAEITRAGVEMGANPLTFAGLAGIGDLVVTATSRHSRNWRAGSLLGQGQQLDAVLESMGMVVEGIRTTKAAYAISQKLGVQMPITEVLYGVLFEGRDVRKAVEALMGRDPKTEMEVMPLQTWEQWHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E582</accession>
    <name>E3E582_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372028.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3485"/>
    <dbReference type="EnsemblBacteria" id="ADO57441">
        <property type="protein sequence ID" value="ADO57441"/>
        <property type="gene ID" value="PPSC2_16315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3483"/>
    <dbReference type="HOGENOM" id="CLU_2772063_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="8415" checksum="944A41FF12250237" modified="2011-01-11" version="1">MYSKIPFFCFFFKPFKPFKALKKATQMSDLYLPMYLEHQMNKGAYLKPEKRNSDRFYSRKRDAKRYAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D8</accession>
    <name>E3E5D8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Tnr</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">Tnr</name>
        <name evidence="5" type="ORF">PPSC2_17305</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04645"/>
    <dbReference type="EnsemblBacteria" id="ADO57657">
        <property type="protein sequence ID" value="ADO57657"/>
        <property type="gene ID" value="PPSC2_17305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3698"/>
    <dbReference type="eggNOG" id="COG2041">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_247383_0_0_9"/>
    <dbReference type="OMA" id="GSARYKC"/>
    <dbReference type="OrthoDB" id="3385at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00063">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003961">
        <property type="entry name" value="FN3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036116">
        <property type="entry name" value="FN3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00060">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49265">
        <property type="entry name" value="SSF49265"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50853">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168557" evidence="2">
        <location>
            <begin position="39"/>
            <end position="1530"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="3">
        <location>
            <begin position="642"/>
            <end position="731"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="3">
        <location>
            <begin position="819"/>
            <end position="903"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="3">
        <location>
            <begin position="984"/>
            <end position="1066"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="3">
        <location>
            <begin position="1150"/>
            <end position="1231"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="4">
        <location>
            <begin position="1352"/>
            <end position="1415"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="4">
        <location>
            <begin position="1474"/>
            <end position="1530"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1300"/>
            <end position="1326"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1300"/>
            <end position="1317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1530" mass="168765" checksum="EA9EE5B7DC8E6E55" modified="2011-01-11" version="1">MYRKNKRRVRKHSKWVYGALALLLLLMTIPIFPQRVSAATQEIIGGPFCQNNLPGGGDSWGSWSGSGIGATEVYTGMGSARYKCDGTTQPTNRFIDIGRSIKTSDYRVFVYIEGSYHTDIYTSNAAAGDSWRPNGTNLYTWTNVTKFYANSDYQGKWIDITDSITLRDVRYFRAMGTSQQTSNEISRFGIRIIPKSDLMPKPPQIHADAGGQAVTGWTKKPVTVWIDGDVAPEGLKHYEYSLNGGAFQQFIGPFTVYDHGVNTIYARTVDVNNQYSGLSSANARIDRMPPTPPNIDVTGNSNEYAVLLQPGADDYSGLAHTQFRLTGVVNQDWQDYGGVFHVNQDGKSTIYARSIDSVGNVSREVSKEVTIDKKGPTAPLIRVSETGPTNRDVNIAIESGSDSTNGIKMTQYRLSPTGEWLTYNGTFTLNAEGSYELSARTINNLDVSSPIVTQSVLIDRTKPTPPKVAFSEVTNPTRYINKPVQFTLSGVTDTTALHYEYQLGSGAYVPGSSGILNSSGIVEVTAQAVDAAGNRSVPVTAKTYIDLEQPSIQLTPNSREWKDTHIDVKIQYADQHSGIEPSTMQYKVTNSPDSPENWETAVDPIVQLDLSNEGEWYVHAKVKDQAGNIYERVSSALRIQKQPQSVVLSATSVRNTEVDLQWTLPSGLNDGYVYTVRNLTTNEVWDVSHPTNSFTDTGLLGGHEYEYEVRCSNHVGGNAYSNRVHVLTLPDAPDHVQLRPVSRHSAEIMAEFTPVFSANKYSITAADANTGEIIFKDTVTQDVYNSIKGMEPGKYYEVSVSAINDTGEGAAKHVSFLSLPDSPSGFRNVTIREDGIDLKWNSVITATYYALERDEVSVYNDVYTEFTDTELQAGTEYSYRISAENATGFGDYAHLGVMTLPDRVTTLSSVTKDVYSVGVAWQDVQGAEGYILNVNDEPKVQIPRDIRSYTFEGLPAGRSANIKIRAYNRSGTGRDTSINVVTLPNSPIQLAAVDVREHDATLIWAPVDGATQYKVTINGQNYYSTEPRVVVSGLTGGKNYDFQVSSGNSSGYSPPALGQLLTLPPQVQNVKVTELGNGKISLTWDEIISASQYAVIRKDTGEIFNTRKAYIILSDIQPGIIYSFSIQAMNTTGEGDITPLTYRALPGQIADRSLVVKSVTDTDLLITWQEAPGADAYNVYKNEMLIGHTIAHEFKVDGLDSSTLYRITVKPVNTSGEGKRTEGQVETLPSPAFAFSKTETTNSEFIIHWESEHENDIFVLASEEGTELYRGKDRGFIWRQLREKQLYTVQLWAENSQGKRTEAKQANGKTTGNTVDTGGGAGGAGSAKPIQTVVEEPTEIKTEFFQGLTIETKPNHFSDIERVFNREKINALADLGVVKGTSSTLFEPNRPVTRMEFTSMLVRSLKLPLETDMALEFEDITPSAWYVDLLKTAIKDQVARGFSSKVFGPDRVINREQAAKMVNNIIKATPQQESNVYSDSSQIVEWARKDVLGLTEINLVQGYPDGSFRAKQEVTRAEAAEMIYNMLQMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5J8</accession>
    <name>E3E5J8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372298.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3763"/>
    <dbReference type="EnsemblBacteria" id="ADO57717">
        <property type="protein sequence ID" value="ADO57717"/>
        <property type="gene ID" value="PPSC2_17595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3759"/>
    <dbReference type="eggNOG" id="ENOG50305Y5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1675404_0_0_9"/>
    <dbReference type="OMA" id="DFTDQHN"/>
    <dbReference type="OrthoDB" id="1546276at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="18969" checksum="9C3098A5049BD36A" modified="2011-01-11" version="1">MKKYIEFYFYLPFFDLIDDTDGVFSLEELMRQLNISFNVMELYNQYLSYGEGVSRVGKGDVFVFFTKYDKNSFILIDLFNDFTDQHNMVKLGVRCEIKHDKRIRYILNNIHLRAEAKSKMNESNDDLLKLDINSEEYPKEIRYEDHIYIKNIYYNTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Q1</accession>
    <name>E3E5Q1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppD5</name>
        <name evidence="7" type="ORF">PPSC2_18550</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372507.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05770"/>
    <dbReference type="EnsemblBacteria" id="ADO57928">
        <property type="protein sequence ID" value="ADO57928"/>
        <property type="gene ID" value="PPSC2_18550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3975"/>
    <dbReference type="eggNOG" id="COG0444">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_23_9"/>
    <dbReference type="OMA" id="RVNVMYL"/>
    <dbReference type="OrthoDB" id="1101128at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="5"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="41"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="355" mass="39274" checksum="18E2AD726462F91B" modified="2011-01-11" version="1">MNRLLEVKDLTISFKTRQGLVQAIRGVNFHVNKGETLAIVGESGSGKSVTSQAVMKLIPTPPGVYQKGQIMFDGQELINKTEKQMQKIRGKEIGLISQDPMTSLNPTMKVGKQITEVLFKHEKISKDAARKRGIELLNLVGIPHPEQRFNQYPHEFSGGMRQRVVIAMALAANPKLLIADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVAKMADRVAVMYAGQIVETGTVNEIFYNPKHPYTWGLLASMPSLDSHGQKLAAIPGTPPDLLHPPVGDAFAARSSYAMKIDFEKEPPLYQLSDTHFVKSWLLHPDAPAVEPPEAVKAKLRKLDNAFEKPVLVEQYGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5R1</accession>
    <name>E3E5R1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372517.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05815"/>
    <dbReference type="EnsemblBacteria" id="ADO57938">
        <property type="protein sequence ID" value="ADO57938"/>
        <property type="gene ID" value="PPSC2_18595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3984"/>
    <dbReference type="eggNOG" id="ENOG5033YIJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_139132_1_1_9"/>
    <dbReference type="OMA" id="AGNFAIC"/>
    <dbReference type="OrthoDB" id="1871614at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="13144" checksum="6255B8B06B3873CD" modified="2011-01-11" version="1">MIHLEKESGRIRLVLDAYFMGEDIVLLISGGDQPHLGTITAGARLEPIQTVQLQNHKEFYITEEIAVRLRKEFAGNFAICCGTHLDHATKDEIRVLTDMAIQMGKELIEELKQVRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5S2</accession>
    <name>E3E5S2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cysteine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tcyB</name>
        <name evidence="8" type="ORF">PPSC2_18640</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372527.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05860"/>
    <dbReference type="EnsemblBacteria" id="ADO57949">
        <property type="protein sequence ID" value="ADO57949"/>
        <property type="gene ID" value="PPSC2_18640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3994"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_1_4_9"/>
    <dbReference type="OMA" id="QWEAGYS"/>
    <dbReference type="OrthoDB" id="1523519at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="21"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="24816" checksum="47C0A88668D2DCCF" modified="2011-01-11" version="1">MDDRQIQIIMDSLLPLLKAGVSFTIPLTLISFALGLLLALITALARLSKWRILKLIFGFYVWVIRGTPLLVQLYIIFYGLPSVGITLDPFIASVIGFTLSVGAYSSEIMRAAIISIQEGQWEAGYSLGMTRWQVLRRIVLPQASRVSVPPLANSFISLVKDTSLAATITYVEMFRTANQIVATTYEPLLVYTEAGVIYLLFSTILTVLQNYLEKRLSRFSVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E610</accession>
    <name>E3E610_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Multidrug ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gldA7</name>
        <name evidence="6" type="ORF">PPSC2_20020</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58229.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07240"/>
    <dbReference type="EnsemblBacteria" id="ADO58229">
        <property type="protein sequence ID" value="ADO58229"/>
        <property type="gene ID" value="PPSC2_20020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4266"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OrthoDB" id="1926714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="320"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="353"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58229.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="370" mass="41009" checksum="17B0B50388241523" modified="2015-05-27" version="2">MLKVQQVSKWYEGNRGVHKLDFEMQRGEIVGFLGPNGAGKTTTMRMITGYLQPNEGVITIDGIPIQDKGRQARSKIGYLPETPPLYGDMSVRSYLKFVASIRDVPVREQKLRISEMISRLGLNGREKQLVRSLSKGYKQRLGLAGAIIHNPDLLVLDEPTSGLDPNQILEIRQLIQEIGENHTVLLSTHILPEVDALCNRVLIIHEGKLVMDGRPDALGGSMEDGFKVKLEVKGKHEQVMDVIRAWGKVQVESLAPTLPSVNTKLTATEQDLTELLLTGASDEDFREELFFVLSDAKLPILEMKKENLSLENIFQQLTTRETEEGQGGDPAVHDLHTSKNEATVITADHGEASASDNKVEEDKDTGGNRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E667</accession>
    <name>E3E667_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF2263 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371356.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E667"/>
    <dbReference type="STRING" id="1406.LK13_00745"/>
    <dbReference type="EnsemblBacteria" id="ADO56752">
        <property type="protein sequence ID" value="ADO56752"/>
        <property type="gene ID" value="PPSC2_13055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2780"/>
    <dbReference type="eggNOG" id="COG4295">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024412_4_1_9"/>
    <dbReference type="OMA" id="AHRDPFY"/>
    <dbReference type="OrthoDB" id="1481953at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012664">
        <property type="entry name" value="CHP02452"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019261">
        <property type="entry name" value="PARG_cat_microbial"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10021">
        <property type="entry name" value="DUF2263"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF014899">
        <property type="entry name" value="UCP014899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52949">
        <property type="entry name" value="SSF52949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02452">
        <property type="entry name" value="TIGR02452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2263" evidence="1">
        <location>
            <begin position="18"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="33627" checksum="FDA76DA706C94E18" modified="2011-01-11" version="1">MKNTMNSRSNRDVRSYMAHETLSILENGHYTNTKQVQVNIAKEVENAVTGSKLYRPSQLVAIKQEAEQRIKSIWGASSDVVEQAVIGKIEVTGESTLQAAHRLQVEEKREHVACLNFASAKNPGGGFLGGSQAQEESLARSSALYPCISQMEEMYQHNRKLRSCFYSDYMIYSPQVPVFRDDQGTLLENPYLVDFLTAPAVNAGVVREREPEQVNRIGEVMLERIRYILGMAMQNGVEHLVLGAYGCGVFRNKPEEVADWFKQVLVAEGYGLLFEQIVFAVLDHKTEQRTLNSFKNALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H5</accession>
    <name>E3E6H5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Polyphosphate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_19075</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372619.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06275"/>
    <dbReference type="EnsemblBacteria" id="ADO58044">
        <property type="protein sequence ID" value="ADO58044"/>
        <property type="gene ID" value="PPSC2_19075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4087"/>
    <dbReference type="eggNOG" id="COG2326">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048699_1_2_9"/>
    <dbReference type="OMA" id="RTHYENV"/>
    <dbReference type="OrthoDB" id="953793at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006797">
        <property type="term" value="P:polyphosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016898">
        <property type="entry name" value="Polyphosphate_phosphotransfera"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022300">
        <property type="entry name" value="PPK2-rel_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028756">
        <property type="entry name" value="PPK2_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03709">
        <property type="entry name" value="PPK2_rel_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="3">
        <location>
            <begin position="29"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="32475" checksum="0D4FF02A816D3078" modified="2011-01-11" version="1">MSDSLGMLTPGKKVSLKEWDPKDTKNIKNKEEIRQETDQLKERFAELQSKLFTEKKQAVLFVFQGMDCSGKDGVIKQVFSNLNPAGVTVHSFKSPTTEELSHDFLWRAHSVTPGRGYIAAFNRSYYEDVLITRVHGQVSDKQAKRNIKHIKHFEQLLLDSGVKVVKIFLHISKQFQLEKLIDRIEKPRKNWKLDPSDLQERKFWKQYTQYYEEVLELSATKQAPWYVVPSDNRWYRDYTVLRIAVQTLEEMKLSDPDPRPELKALLPELYKERDKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H8</accession>
    <name>E3E6H8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATPase AAA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yrvN</name>
        <name evidence="3" type="ORF">PPSC2_19090</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06290"/>
    <dbReference type="EnsemblBacteria" id="ADO58047">
        <property type="protein sequence ID" value="ADO58047"/>
        <property type="gene ID" value="PPSC2_19090"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.4090"/>
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        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="977094at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
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        <property type="project" value="InterPro"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="P:DNA replication"/>
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        <property type="project" value="InterPro"/>
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        <property type="entry name" value="AAA+_ATPase"/>
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        <property type="entry name" value="AAA_assoc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
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        <property type="entry name" value="MgsA_C"/>
    </dbReference>
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        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="50"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008959"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="436" mass="48451" checksum="A3EE7E6A316919B4" modified="2011-01-11" version="1">MDLFSYSQESTPNNRLLADRLRPTSLDEYIGQEHVVGPGKLLRRAIEADQVSSILLYGPPGCGKTTLAHIISQHTQGDFVRLNAVEASVKDVREVIDRAQTNKSMYGKKTILFLDEVHRFNSSRQDALLPAVEKGTIVFIGATTENPFHYVNGALMSRSTLFQLEALTQEHSLAAMRRALSDADKGLGYMQLQVDEAALDHIASMANGDIRRALNALELAALTTPPLADGTIHVTLEVAEESIRRPIVKADESTQYDVLSAFHKSIRGSSDAALFWFLYAVEKLGMDPMTFIRRLIAASSEDIGLANPQAMVQAVSALEAYRNNGWPEAKLNIAQAILFAVESPKSNAVYTAISRAMSAMDDMKSAEVPLHLRDAHYKGSEKLGHVGYQYPHNFPNHYVRQQYLPNSIADQTFYQATEQGNESKIRQNQRWRDSQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R7</accession>
    <name>E3E6R7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytxH</name>
        <name evidence="2" type="ORF">PPSC2_21200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08430"/>
    <dbReference type="EnsemblBacteria" id="ADO58469">
        <property type="protein sequence ID" value="ADO58469"/>
        <property type="gene ID" value="PPSC2_21200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4506"/>
    <dbReference type="eggNOG" id="COG4980">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105320_0_2_9"/>
    <dbReference type="OMA" id="MNYANSA"/>
    <dbReference type="OrthoDB" id="2146228at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024623">
        <property type="entry name" value="YtxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12732">
        <property type="entry name" value="YtxH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="133" mass="13654" checksum="F5F408BC44D94364" modified="2011-01-11" version="1">MSNMDNQNMASTSGFAKGLFIGGLIGAAAALLFAPKPGRDLRSDLSEKMTVVSDKTKDVASVVSSKATDLAKTVSTKTADVAKTVSESKDNIVASVTKASADVANEAAKADKEVMDATAQAAKDTQKQLNANS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6S9</accession>
    <name>E3E6S9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_21260</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373050.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08490"/>
    <dbReference type="EnsemblBacteria" id="ADO58481">
        <property type="protein sequence ID" value="ADO58481"/>
        <property type="gene ID" value="PPSC2_21260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4518"/>
    <dbReference type="eggNOG" id="COG4768">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1592937_0_0_9"/>
    <dbReference type="OMA" id="VRHANDI"/>
    <dbReference type="OrthoDB" id="1911762at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009293">
        <property type="entry name" value="UPF0478"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06103">
        <property type="entry name" value="DUF948"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="106"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="25"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="18927" checksum="B64F9CEB5EAC9E14" modified="2011-01-11" version="1">MLTQVSIFIIAIAFAVLVIYLIKTLKAAQGSLDKVTQTLQEVQKTVDELSYEVKQTVRHANDITADVDHKLKQVEPVMESVKNLGEVLSEVTLAAKQASTALMTRLQKSRSTASSTSGTEKAIKSTVSNRPLTATERTVQSYNATYGEPAGKPAKNWLGYVDIAAGVWQKMRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6U0</accession>
    <name>E3E6U0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">High-affinity heme uptake system protein IsdE</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Iron-regulated surface determinant protein E</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Staphylococcal iron-regulated protein F</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fhuD1</name>
        <name evidence="11" type="ORF">PPSC2_21300</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373060.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08530"/>
    <dbReference type="EnsemblBacteria" id="ADO58492">
        <property type="protein sequence ID" value="ADO58492"/>
        <property type="gene ID" value="PPSC2_21300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4528"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_2_3_9"/>
    <dbReference type="OMA" id="IWKHFNA"/>
    <dbReference type="OrthoDB" id="1473468at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015886">
        <property type="term" value="P:heme transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019957">
        <property type="entry name" value="ABC_transptr_haem-bd_IsdE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03659">
        <property type="entry name" value="IsdE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0349">Heme</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168204" description="High-affinity heme uptake system protein IsdE" evidence="9">
        <location>
            <begin position="36"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="10">
        <location>
            <begin position="64"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="34"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="151"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00031148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00031463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="34512" checksum="59761CD321EF215A" modified="2011-01-11" version="1">MKQYAALTQKKSFVFYMLIGIMILLLAGCSGGTQAGQNPSDGSTSTAASDATGKSSNDKTATPRIVATTVAISEITDALGLGLAGKPTSTKVLPDRYKDVPDVGNPMSPDMEKVMSLKPTDVLSVTTLKYDLEPKFKDLNINAEFLNFESLANMQKEIQKLGDRFDKAEKAKEINGALDAKVAEIQQKIKGKKSPKVLILLGVPGSYLVATEHSYIGDLVKIAGGTNVVQGEKVEFIAHNTEALQQSNPDIILRAAHGMPDEVVKMFDEEFKTNDIWKHFNAVKKGHVYDLPEPLFGTTGNLAASSALDELMKMLYPSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W9</accession>
    <name>E3E6W9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9 10">Xylose isomerase</fullName>
            <ecNumber evidence="2 9 10">5.3.1.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">xylA</name>
        <name evidence="13" type="synonym">xylA3</name>
        <name evidence="13" type="ORF">PPSC2_21440</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 9 10">
            <text>alpha-D-xylose = alpha-D-xylulofuranose</text>
            <dbReference type="Rhea" id="RHEA:22816"/>
            <dbReference type="ChEBI" id="CHEBI:28518"/>
            <dbReference type="ChEBI" id="CHEBI:188998"/>
            <dbReference type="EC" id="5.3.1.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="9">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9 11">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9 10">Belongs to the xylose isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.5" evidence="2 9 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373089.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08635"/>
    <dbReference type="EnsemblBacteria" id="ADO58521">
        <property type="protein sequence ID" value="ADO58521"/>
        <property type="gene ID" value="PPSC2_21440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4558"/>
    <dbReference type="eggNOG" id="COG2115">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037261_1_0_9"/>
    <dbReference type="OMA" id="TLAMYEI"/>
    <dbReference type="OrthoDB" id="481478at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009045">
        <property type="term" value="F:xylose isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00455">
        <property type="entry name" value="Xylose_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013452">
        <property type="entry name" value="Xylose_isom_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001998">
        <property type="entry name" value="Xylose_isomerase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00688">
        <property type="entry name" value="XYLOSISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02630">
        <property type="entry name" value="xylose_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51415">
        <property type="entry name" value="XYLOSE_ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0859">Xylose metabolism</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="12">
        <location>
            <begin position="142"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="266"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="305"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="307"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="337"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="438" mass="49240" checksum="2B8FAF868E80914C" modified="2011-01-11" version="1">MAYFEQVSKINFEGKQSDNPFAFKFYNPQEIVAGKTMEEHLRFSMAYWHTLVAGGSDPFGVETAERPWSKFTGLDLAKARVEAAFELLDKLNLPYFAFHDVDIAPEGASLKEFYSNLDTIVDLIEEHMKATGKKLLWNTANMFSHPRYLHGAATTCNADVYAHAAAQIKKGLEVGKRLGADNYVFWGGREGYETLLNTDLKLEQDNLGRMFHMAVDYAREIGFDAQFLIEPKPKEPTKHQYDFDAATTIAFLQKYDLDQHFKLNLEANHATLAGHTFDHEVRVARVNGMLGSLDANQGDLLLGWDTDEFPVDLYDATLTMYEVLQNEGLGRGGINFDAKVRRASFEPEDLFLAHIAGMDTYAKGLKVAAKLIEDRVFEDFIEKRYSSFKEGIGADIVSGKATLASLAEYALANEAPRKNVSGRQEYLKATLNQYILAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6X6</accession>
    <name>E3E6X6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoIIM2</name>
        <name evidence="2" type="ORF">PPSC2_22240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373242.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09705"/>
    <dbReference type="EnsemblBacteria" id="ADO58678">
        <property type="protein sequence ID" value="ADO58678"/>
        <property type="gene ID" value="PPSC2_22240"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4716"/>
    <dbReference type="eggNOG" id="COG1300">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_099320_0_1_9"/>
    <dbReference type="OMA" id="CAFGLKF"/>
    <dbReference type="OrthoDB" id="1722795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002798">
        <property type="entry name" value="SpoIIM-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01944">
        <property type="entry name" value="SpoIIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="22494" checksum="5DC7B62B818311A6" modified="2011-01-11" version="1">MGLKAFFYDLRTTRRLILIAALFFCASIVVGWLSTGVIQAMLAQQMEGLGGVAQRLQNSEHPQWSFFVFIFFNNAIKCVLVIYTGALFGIVPFIFLIVNGMVLGFVVHLQTDMGRSMYEIVVKGLLPHGVIELPVLIIACAFGLKFGVNIISTLGTSIGLKRKGTGPSWEVFLKQTLTVSIWSVIFLFIAAAIESGITYRLLSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E709</accession>
    <name>E3E709_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">30S ribosomal protein S17</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">rpsQ</name>
        <name evidence="6" type="ORF">PPSC2_22390</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 4">Belongs to the universal ribosomal protein uS17 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432574.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09855"/>
    <dbReference type="EnsemblBacteria" id="ADO58711">
        <property type="protein sequence ID" value="ADO58711"/>
        <property type="gene ID" value="PPSC2_22390"/>
    </dbReference>
    <dbReference type="GeneID" id="66575589"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4747"/>
    <dbReference type="eggNOG" id="COG0186">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073626_1_0_9"/>
    <dbReference type="OMA" id="HPMYGKF"/>
    <dbReference type="OrthoDB" id="2035880at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01345_B">
        <property type="entry name" value="Ribosomal_S17_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019984">
        <property type="entry name" value="Ribosomal_S17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000266">
        <property type="entry name" value="Ribosomal_S17/S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019979">
        <property type="entry name" value="Ribosomal_S17_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10744">
        <property type="entry name" value="PTHR10744"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00366">
        <property type="entry name" value="Ribosomal_S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00973">
        <property type="entry name" value="RIBOSOMALS17"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03635">
        <property type="entry name" value="uS17_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00056">
        <property type="entry name" value="RIBOSOMAL_S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 4 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 3 5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="87" mass="10119" checksum="8CDFDF08B568A061" modified="2011-01-11" version="1">MSERNARKVLVGKVVSDKMDKTIVIAVETYKKHDLYHKRIKVTKKFKAHDENNTAQIGDTVKIMETRPLSKDKNWRLVEIVEKAVII</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E775</accession>
    <name>E3E775_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Tagatose-6-phosphate kinase</fullName>
            <ecNumber evidence="2">2.7.1.144</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lacC</name>
        <name evidence="4" type="ORF">PPSC2_23415</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + D-tagatofuranose 6-phosphate = ADP + D-tagatofuranose 1,6-bisphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12420"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58694"/>
            <dbReference type="ChEBI" id="CHEBI:58695"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.144"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate metabolism; D-tagatose 6-phosphate degradation; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-tagatose 6-phosphate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the carbohydrate kinase PfkB family. LacC subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the carbohydrate kinase pfkB family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.144" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373466.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10905"/>
    <dbReference type="EnsemblBacteria" id="ADO58930">
        <property type="protein sequence ID" value="ADO58930"/>
        <property type="gene ID" value="PPSC2_23415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4957"/>
    <dbReference type="eggNOG" id="COG1105">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050013_5_0_9"/>
    <dbReference type="OMA" id="QLNEPGP"/>
    <dbReference type="OrthoDB" id="1323781at2"/>
    <dbReference type="UniPathway" id="UPA00704">
        <property type="reaction ID" value="UER00715"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009024">
        <property type="term" value="F:tagatose-6-phosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001059">
        <property type="term" value="P:D-tagatose 6-phosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005988">
        <property type="term" value="P:lactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01164">
        <property type="entry name" value="FruK_PfkB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002139">
        <property type="entry name" value="Ribo/fructo_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017583">
        <property type="entry name" value="Tagatose/fructose_Pkinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000535">
        <property type="entry name" value="1PFK/6PFK/LacC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00990">
        <property type="entry name" value="RIBOKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03168">
        <property type="entry name" value="1-PFK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0423">Lactose metabolism</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="3">
        <location>
            <begin position="16"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR000535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="31545" checksum="64E7BB5129BE4D8A" modified="2011-01-11" version="1">MITTVTLNAAVDKIYTVAGFGLNAVHRIEGGLTVPGGKGVNAARVIRTLGQPVRATGFVAGHTGRLLIDGLSAEGVNADFIETAHGETRLAITVLDPAARTQTELIESGPTVGPLELAALRRKIATLAEDSAWVVLSGSLPPGCPPDLYAELCTLAKSRGARVALDASGEALRLGLRGKPDLVKPNEDEAARFAGIDAARPDAAEAAASQLLEAGAQLAVISLGARGALAVTRDARYRVSLPEADIVSALGSGDAMVAGMVTGAAAGLDLPAMLRQGAACGTAAALHAMAGKIELQDVERLEQGITVTLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7D7</accession>
    <name>E3E7D7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yjkA</name>
        <name evidence="7" type="ORF">PPSC2_24425</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0014 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373682.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11915"/>
    <dbReference type="EnsemblBacteria" id="ADO59148">
        <property type="protein sequence ID" value="ADO59148"/>
        <property type="gene ID" value="PPSC2_24425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5172"/>
    <dbReference type="eggNOG" id="COG0390">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076147_1_0_9"/>
    <dbReference type="OMA" id="PWYEPQY"/>
    <dbReference type="OrthoDB" id="1882150at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005226">
        <property type="entry name" value="UPF0014_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30028">
        <property type="entry name" value="PTHR30028"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03649">
        <property type="entry name" value="UPF0014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00245">
        <property type="entry name" value="TIGR00245"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="117"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="214"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="27930" checksum="2D6ECC39C8E1DE72" modified="2011-01-11" version="1">MTIVALILSLGFVFIAIVMSKSFKLGLDRDIIIATIRASVQLLVIGYVLHLIFGMQSYGFIVLFILLMITVASQNVARKGRFIPQLMWKSFLTLLCVEIVTQAFLIGLHIIPATARYMIPISGMIIGSSMILSSLLVSRLKSEVLLRKPEIMLILALGGTPRQAIFPILKNCIHSSMIPTIEGQKTLGLVQLPGMMTGQIIAGANPIVAVRLQLLIVFTTMTSAILTSVLLSLFIYPTLFTRQQQLRTESWEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7H3</accession>
    <name>E3E7H3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">PTS dihydroxyacetone transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydhN3</name>
        <name evidence="7" type="ORF">PPSC2_24590</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5">Binds 1 Mg(2+) ion per trimer.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373717.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12070"/>
    <dbReference type="EnsemblBacteria" id="ADO59184">
        <property type="protein sequence ID" value="ADO59184"/>
        <property type="gene ID" value="PPSC2_24590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5209"/>
    <dbReference type="eggNOG" id="COG1447">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_152490_0_0_9"/>
    <dbReference type="OMA" id="THIQDHI"/>
    <dbReference type="OrthoDB" id="2038379at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00215">
        <property type="entry name" value="PTS_IIA_lac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003188">
        <property type="entry name" value="PTS_IIA_lac/cel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036542">
        <property type="entry name" value="PTS_IIA_lac/cel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34382">
        <property type="entry name" value="PTHR34382"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02255">
        <property type="entry name" value="PTS_IIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000699">
        <property type="entry name" value="PTS_IILac_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46973">
        <property type="entry name" value="SSF46973"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51095">
        <property type="entry name" value="PTS_EIIA_TYPE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="4">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <note>ligand shared between all trimeric partners</note>
        </ligand>
    </feature>
    <feature type="modified residue" description="Phosphohistidine; by HPr" evidence="6">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000699-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000699-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="12494" checksum="20BE236AFFCA16A7" modified="2011-01-11" version="1">MDKINIAELTEEQISFQLILHSGSARSKVIQALTEYRNENVEGADELLKEAKQDLRAAHDIHFQMVKKEAGGTQTPFSLLLMHAEDHLMSTVTMKDLVKELLELFKSRSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7L9</accession>
    <name>E3E7L9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_13405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371427.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01090"/>
    <dbReference type="EnsemblBacteria" id="ADO56824">
        <property type="protein sequence ID" value="ADO56824"/>
        <property type="gene ID" value="PPSC2_13405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2855"/>
    <dbReference type="eggNOG" id="COG3266">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096787_0_0_9"/>
    <dbReference type="OMA" id="QSNERMF"/>
    <dbReference type="OrthoDB" id="1558763at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025341">
        <property type="entry name" value="DUF4247"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14042">
        <property type="entry name" value="DUF4247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168620" evidence="2">
        <location>
            <begin position="29"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="146"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="150"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="186"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="27685" checksum="058FFE1963CBA3AE" modified="2011-01-11" version="1">MSKRTWQYALKVIVALSLFVSVLSGCGAPNVKDTYPLESVSGSGNSTSYVYRAAGKTVPEVAEELKEQRTPEQMSPQSNERMFLVYSDEWYHLQQDPAKKEDTLIEIDSKKYVEQNYSSSFLKGYLTATVLDALFDSLRGSGSYRGYSSRDVYRPSQGQYRAPTAQEKKTIPPITVERKGSVTRRGKNSDSSVGSSGSLFDRGSSSSPSRGSISRDRGSSGGSSIFDSPRKSYSKPKTRSGSGKISRRSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7X7</accession>
    <name>E3E7X7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Biotin synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">bioB3</name>
        <name evidence="8" type="ORF">PPSC2_14270</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371609.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01925"/>
    <dbReference type="EnsemblBacteria" id="ADO57010">
        <property type="protein sequence ID" value="ADO57010"/>
        <property type="gene ID" value="PPSC2_14270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3046"/>
    <dbReference type="eggNOG" id="COG0502">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033172_0_1_9"/>
    <dbReference type="OMA" id="IMGFNPY"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044271">
        <property type="term" value="P:cellular nitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018130">
        <property type="term" value="P:heterocycle biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901362">
        <property type="term" value="P:organic cyclic compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901566">
        <property type="term" value="P:organonitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044272">
        <property type="term" value="P:sulfur compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042364">
        <property type="term" value="P:water-soluble vitamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010722">
        <property type="entry name" value="BATS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024021">
        <property type="entry name" value="FeFe-hyd_HydE_rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034422">
        <property type="entry name" value="HydE/PylB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43726">
        <property type="entry name" value="PTHR43726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00348">
        <property type="entry name" value="FeFe_hydrogenase_maturase_(Hyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00876">
        <property type="entry name" value="BATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03956">
        <property type="entry name" value="rSAM_HydE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="32"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="339" mass="37829" checksum="03543EB881E817C3" modified="2011-01-11" version="1">MTELLTRLDSEPALRAQLRQLAARTKLERYGKGVFLRGLIEFSSICRQDCMYCGLRASNKQADRYRLQPEEILACCAEGYELGYRTFVLQSGEDYWFTAARLTKLIREIKSRFADVAVTLSIGERDDETYERLYEAGADRFLLRHETASPSLYAKLHPTMTIESRRSRLLALQRIGFQIGAGCMVGLPGQTNSELADDLVYLHSLSPDMIGIGPFLPHSNTPLREASQGSMEKALDIISLSRLVVPDALIPASTAMGTIHPQGREKALQAGANVVMPNLSPLAVRPKYAIYENKICLGDESAQCRHCLELRIRGAGFEVDMGRGDSLRVQRQLMRQGTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E850</accession>
    <name>E3E850_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_14995</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371756.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57163">
        <property type="protein sequence ID" value="ADO57163"/>
        <property type="gene ID" value="PPSC2_14995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3200"/>
    <dbReference type="eggNOG" id="ENOG502ZHGC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1873376_0_0_9"/>
    <dbReference type="OMA" id="CKHKAER"/>
    <dbReference type="OrthoDB" id="1648810at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="57"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="15084" checksum="A5EF4BD0A5A20CFF" modified="2011-01-11" version="1">MWNSLTWVIVGVLLVALGWIVMAWRGRSGNQQQSDEHRGSNVVEFRPRKPARQSRTGNEMKSKVSSGTRANTKAADIQAQAGFGLSDSIQSTSKQKCSFCKKEEKLTFYADDNGSLYGVCKECKHKAERQDMLPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8B7</accession>
    <name>E3E8B7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arginine decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cad</name>
        <name evidence="4" type="ORF">PPSC2_15690</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Orn/Lys/Arg decarboxylase class-I family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371896.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03340"/>
    <dbReference type="EnsemblBacteria" id="ADO57309">
        <property type="protein sequence ID" value="ADO57309"/>
        <property type="gene ID" value="PPSC2_15690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3350"/>
    <dbReference type="eggNOG" id="COG1982">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025925_2_1_9"/>
    <dbReference type="OMA" id="WSTLLTE"/>
    <dbReference type="OrthoDB" id="485164at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00615">
        <property type="entry name" value="Orn_deC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000310">
        <property type="entry name" value="Orn/Lys/Arg_deCO2ase_major_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008286">
        <property type="entry name" value="Prn/Lys/Arg_de-COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036633">
        <property type="entry name" value="Prn/Lys/Arg_de-COase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01276">
        <property type="entry name" value="OKR_DC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03711">
        <property type="entry name" value="OKR_DC_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55904">
        <property type="entry name" value="SSF55904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00703">
        <property type="entry name" value="OKR_DC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OKR_DC_1" evidence="3">
        <location>
            <begin position="221"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="491" mass="54051" checksum="6E316C1721E82BE1" modified="2011-01-11" version="1">MNQSNTPLFTALKKHAQSNPVQFHIPGHKKGVGADREFREFMGDNAFSIDMINIAPLDDLHQPSGVIEEAQKLAAEAFGADYTYYSVQGTSGAIITMIMSICMPGDKIIVPRNIHKSIMSAIIFAGAKPVFISPVSDENLGIHHGVTTKSVRRALERHPDAKGVLVINPTYYGVCADLKEIVDLAHSYNVPVLVDEAHGVLIHFHADLPMSAMEAGADMSATSVHKLGGSLTQSSILNVNTKNGFVNPQRVQTIFSMLTTTSTSYILLASLDTSRRNLALNGHEIAQRALELAEYCRAEVNKIEGLYCFGSEILGTEATYDYDPTKVTVHIRHLGLTGYDVENWLRDHYNIEVELSDMYNILCLVTPGDTKEEIDILLKALRELAALHYSTGQQHELVVKIPDIPQLSLIPRDAFYGDTEIVPFKESAGRIIAEFIYVYPPGIPILLPGEVISQDNIDYIVDHVEVGLPVKGPEDRTVHQVKVIVETDAIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Z0</accession>
    <name>E3E8Z0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yobV11</name>
        <name evidence="3" type="ORF">PPSC2_24640</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12115"/>
    <dbReference type="EnsemblBacteria" id="ADO59197">
        <property type="protein sequence ID" value="ADO59197"/>
        <property type="gene ID" value="PPSC2_24640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5220"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041141_5_0_9"/>
    <dbReference type="OMA" id="VDATRWK"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_11" evidence="1">
        <location>
            <begin position="5"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="WYL" evidence="2">
        <location>
            <begin position="142"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="36394" checksum="70F7B367643CA680" modified="2011-01-11" version="1">MRLHRLIAILLCIESRGRMKARELALALETSVRSIYRDIDLLAEAGVPIVTASGPKGGIYLMDGYTANLKQLNGGDVIQLYLTGMGIYTGGSTESGLKLKNTLLKLEQTMPAPYQSDIQKAKARFYFDDTPWWTERVAIPCLEAVRAAVWGSYKVTIQYEKADGSCSSRDVHPYGLVVKKGDWYLIAFCEVGQEIRTFKCERIIEIQPSAEVFEVPGDFSLEHYWMRQESTFKQLCREKKYYPVLIRTTKKQAGILAKRMEIIQSVQEGSHFLVTVNMYSYEAACRDTMDWIGRVEIVEPAILRQFVKEEISRLQRIYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E943</accession>
    <name>E3E943_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1330 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373783.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59250">
        <property type="protein sequence ID" value="ADO59250"/>
        <property type="gene ID" value="PPSC2_24865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5270"/>
    <dbReference type="eggNOG" id="COG5470">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_145407_1_2_9"/>
    <dbReference type="OMA" id="MIVIHEF"/>
    <dbReference type="OrthoDB" id="1534521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010753">
        <property type="entry name" value="DUF1330"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07045">
        <property type="entry name" value="DUF1330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1330" evidence="1">
        <location>
            <begin position="2"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="97" mass="10949" checksum="F8C235A14AEC5B5E" modified="2011-01-11" version="1">MSAYVIVDIKVEEEAVFKQYAELADALLQEVPGFRNLTLDPQPETLEGTWKPSIVVVHEFPTYEAAKQFYYSDDYAPLIKLRQSGTQANVILVNGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9H4</accession>
    <name>E3E9H4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">30S ribosomal protein S20</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">rpsT</name>
        <name evidence="9" type="ORF">PPSC2_17060</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Binds directly to 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the bacterial ribosomal protein bS20 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372187.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04395"/>
    <dbReference type="EnsemblBacteria" id="ADO57604">
        <property type="protein sequence ID" value="ADO57604"/>
        <property type="gene ID" value="PPSC2_17060"/>
    </dbReference>
    <dbReference type="GeneID" id="66576632"/>
    <dbReference type="KEGG" id="ppm:PPSC2_17060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3643"/>
    <dbReference type="eggNOG" id="COG0268">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_160655_1_0_9"/>
    <dbReference type="OMA" id="GVIHKNA"/>
    <dbReference type="OrthoDB" id="2005443at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00500">
        <property type="entry name" value="Ribosomal_S20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002583">
        <property type="entry name" value="Ribosomal_S20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036510">
        <property type="entry name" value="Ribosomal_S20_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33398">
        <property type="entry name" value="PTHR33398"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01649">
        <property type="entry name" value="Ribosomal_S20p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46992">
        <property type="entry name" value="SSF46992"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00029">
        <property type="entry name" value="S20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="9466" checksum="1E09FAEA20F64AB2" modified="2011-01-11" version="1">MPNIKSAIKRVKTSDKRRALNASQKSALRTAVKAADTALVGNEAEAAAAAFKVASQKLDKAVTKGLIHKNAAARKKSRLAKKLNALTAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J2</accession>
    <name>E3E9J2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GTPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqeH</name>
        <name evidence="2" type="ORF">PPSC2_17145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372204.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04480"/>
    <dbReference type="EnsemblBacteria" id="ADO57623">
        <property type="protein sequence ID" value="ADO57623"/>
        <property type="gene ID" value="PPSC2_17145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3662"/>
    <dbReference type="eggNOG" id="COG1161">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017878_0_2_9"/>
    <dbReference type="OMA" id="HYNEVQD"/>
    <dbReference type="OrthoDB" id="942962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030378">
        <property type="entry name" value="G_CP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019988">
        <property type="entry name" value="GTP-bd_ribosome_bgen_YqeH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03597">
        <property type="entry name" value="GTPase_YqeH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51721">
        <property type="entry name" value="G_CP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CP-type G" evidence="1">
        <location>
            <begin position="66"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="375" mass="41995" checksum="4B59282C251F5B92" modified="2011-01-11" version="1">MTERPDGGTAVKCSGCGIVMQTTGPDLPGYIPEKLLTREPVICQRCFRIKNYNETSSVTVDQDEFLKLLSQIGDKDALVIHIVDIFDFEGSLISGLQRFVGSNPVVLAVNKTDLLPKVTNWNKVRNWVQKQAKEQGLRTEEIVLCSAKKNQGFDRLLDVVSELRGNRDVYVVGATNVGKSTLINRLIRDYSDMEQELTTSRYPGTTLDMVNIPLDDGKHIIDTPGIVYPWRFSEIVSRQDLSAIMPDKPLKPAAYQLDAGQTLFFGGMARFDFVDGQHQSFTCYINGGLKIHRTKLERADQLFADHAGELLSPPTRDQLAEMPEWTRHEFRVPRKSPSDIYISGLGWIRVNSENGALVAVHAPRGVRVLLRPALI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9J6</accession>
    <name>E3E9J6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Magnesium chelatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">moxR</name>
        <name evidence="3" type="ORF">PPSC2_17165</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372208.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04500"/>
    <dbReference type="EnsemblBacteria" id="ADO57627">
        <property type="protein sequence ID" value="ADO57627"/>
        <property type="gene ID" value="PPSC2_17165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3666"/>
    <dbReference type="eggNOG" id="COG0714">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034716_2_0_9"/>
    <dbReference type="OMA" id="RRIQCNP"/>
    <dbReference type="OrthoDB" id="895310at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011703">
        <property type="entry name" value="ATPase_AAA-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041628">
        <property type="entry name" value="ChlI/MoxR_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07726">
        <property type="entry name" value="AAA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17863">
        <property type="entry name" value="AAA_lid_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_3" evidence="1">
        <location>
            <begin position="41"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="AAA_lid_2" evidence="2">
        <location>
            <begin position="233"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="35877" checksum="4F77730AC15B7218" modified="2011-01-11" version="1">MPVRQESVQIVSAIRSNLESCILGKSFEIKLLLTAMLAGGHILIEDVPGTGKTQMIKALAKSMRGDYRRVQCNPDILPSDITGVSIFHPRDERFYFRPGPVMTNILLADEINRATTKTQSALLEVMEERSVTVDGDTHMLPHPFMLCATQNPIDFEGTYMLPEAQLDRFMLKISLGYPDLETERNMLLHHQTGQPADRLEAVAHMEQIADIQQEIRDIYMDEAVTSYLLDIVRATREHPSVLLGGSPRAALAFVMAAKAYAFQDNRDYVLPDDVKALAPYVLTHRLLLRPEARLDSSNAQSVLQSVLRQVHVPVRMERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9L2</accession>
    <name>E3E9L2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">RNA polymerase sigma factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sigK</name>
        <name evidence="9" type="ORF">PPSC2_17240</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the sigma-70 factor family.</text>
    </comment>
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        <property type="gene ID" value="PPSC2_17240"/>
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    <dbReference type="KEGG" id="ppm:PPSC2_17240"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3682"/>
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        <property type="taxonomic scope" value="Bacteria"/>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="project" value="UniProtKB-KW"/>
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    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
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        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
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        <property type="entry name" value="RNA_pol_sigma-K"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
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        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="spore_sigmaK"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="SIGMA70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="2" id="KW-0749">Sporulation</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="8">
        <location>
            <begin position="198"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26443" checksum="26E593BBC54CD846" modified="2011-01-11" version="1">MPGLFSAIALFIKELTLLVSYVKNNAFPQPLTEKEEARHLKLFAEGNAHSRNTLIEHNLRLVAHIVKKFDNTGEDLEDLISIGTIGLIKAIESFQTGKGTKLATFAARCIENEILMHLRSLKKTRKDVSLHDPIGTDKEGNEITLIDILGSEADDIVDKVQLKIEKSKIYRNLDILDEREKEVVIGRFGLEAGGEERTQREIARELGISRSYVSRIEKRALMKLYHEFYKQKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9P3</accession>
    <name>E3E9P3_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57833">
        <property type="protein sequence ID" value="ADO57833"/>
        <property type="gene ID" value="PPSC2_18140"/>
    </dbReference>
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    <dbReference type="OMA" id="VPWSIEY"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="26048" checksum="382318B05EA0A1D8" modified="2011-01-11" version="1">MIEQLVPYDDLLNHNPFLADEVRYNLLHRICESEESTCLKTSDGNMIFAQSPGHKAWLWISQQIIGNHQLTYIEQLLRYLKGNNLPGVCGDVETVEKFANAYAERHTAQVHTHMVMESYFCPEYKKPLGVGGILRQAISKDVQLVAQFLAGFAEEALDHSVDPAGQISAAEAAKLLILRLDKPSCCKRAYDCSFKINKPSDAIYRWAHPSIIYNSLFYHTQFRVNRRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA73</accession>
    <name>E3EA73_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Spore protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">sspB</name>
        <name evidence="1" type="ORF">PPSC2_20620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07870"/>
    <dbReference type="EnsemblBacteria" id="ADO58365">
        <property type="protein sequence ID" value="ADO58365"/>
        <property type="gene ID" value="PPSC2_20620"/>
    </dbReference>
    <dbReference type="GeneID" id="66575934"/>
    <dbReference type="KEGG" id="ppm:PPSC2_20620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4398"/>
    <dbReference type="eggNOG" id="ENOG5032YCI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_169738_2_0_9"/>
    <dbReference type="OMA" id="LQDMKYE"/>
    <dbReference type="OrthoDB" id="2064087at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.10.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001448">
        <property type="entry name" value="SASP_alpha/beta-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038300">
        <property type="entry name" value="SASP_sf_alpha/beta"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00269">
        <property type="entry name" value="SASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="8486" checksum="8DD4CF9413A1F4A3" modified="2011-01-11" version="1">MYEANQGRGRRSNTLVVPQANNALQQLKYEAAQELGITIPADGYYGDMPSREAGSLGGYITKRLVQLAEQQLSGRSGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA91</accession>
    <name>E3EA91_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_20705</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372952.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07950"/>
    <dbReference type="EnsemblBacteria" id="ADO58383">
        <property type="protein sequence ID" value="ADO58383"/>
        <property type="gene ID" value="PPSC2_20705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4416"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_0_9"/>
    <dbReference type="OMA" id="HIRRIQA"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="327"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="348"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="381"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="614" mass="70419" checksum="86E6EB1DF612B09A" modified="2011-01-11" version="1">MRRVKYIYQKFLDSSFRTKLMLSYFLLSGFIVLILGFVYFETSARNITANVTDSVTSVLRSNNQLLDNKLTAIQKTVDMIPIDHDLLQTITDVDTTDSSSLLRTDRSITKILYRYFGNMEEVYASQIMTQKYAYGSTERMYIPVQPFYSSPLATTAVQAEGATKWIPAYSYADTFHQQDLKQGSYDFSSLFAVVKQLHLTALDDAGTFHTLPEGKEKPILILNFRPDLLKVGFEDYAARSGFAHLSYGMIHDNNGIVMSSDRQQQAGEPVADWLKKAITSEQGTKMVNVKGQSILLVYEAMKTTGWVSYIAIPMEDVLGHLSTIRTYTLFFLGIMMLIAVILAYLLSVYISKPITDMKQAMKVMEKGDFDIRIPERGYDELGDLVIRFNQMNEKIKDLIEENYKSRLRAKESELMALNLQLNPHFLYNTLTTMYWIALEHKQQELGQLIISLAEMLQITTRNKNDTWSLETDLNWLEKYIYIMQNRFENKFTVEYDIDPILLQMEVPKLFLQPFVENSIIHGFAEMESGGQIKITAWIETQLVCFKVEDNGLGIQEDHIRRIQAGEIRSTGIKNVDRRVRLLYGVALHSSEGKGTIVLIRIGETHRSNQMTPIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAC4</accession>
    <name>E3EAC4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha-amylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_21540</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373109.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08735"/>
    <dbReference type="CAZy" id="GH95">
        <property type="family name" value="Glycoside Hydrolase Family 95"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58542">
        <property type="protein sequence ID" value="ADO58542"/>
        <property type="gene ID" value="PPSC2_21540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4579"/>
    <dbReference type="eggNOG" id="COG1554">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004617_2_2_9"/>
    <dbReference type="OMA" id="WTAGADW"/>
    <dbReference type="OrthoDB" id="179460at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004560">
        <property type="term" value="F:alpha-L-fucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016518">
        <property type="entry name" value="Alpha-L-fucosidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027414">
        <property type="entry name" value="GH95_N_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14498">
        <property type="entry name" value="Glyco_hyd_65N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007663">
        <property type="entry name" value="UCP007663"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hyd_65N_2" evidence="2">
        <location>
            <begin position="12"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="824" mass="91789" checksum="2461CBA34587A9D9" modified="2011-01-11" version="1">MTKSERPQSLRLWYRQPAEVWEEALPVGNGRLGAMVFGGIREEHLQLNEDTLWSGFPRDGVQYDALRYLEPARKLIADGKYKEAEQLITSNMLGRDTEAYQPLGDLWITQENLGEIAHYERELDMQTGTAAVTFQSDGVRYTRKVIASAPDGVIMVSLTANKVGKIHASVRMTTPHSCDDEAGEDVHFSDSSQWASDNDPSEEPTRDFITLTGRAPSHVESNYHGDHPQSVVYENDLGMAFAVQARVIPEGGTLTTRDDGALIISDADKITVYLAAATGFRGFQAMPNSDATESAEACKVILDGAISLGSEQVRQRHEQDHRKLFDRVALELGSDTLTDESVLPTDLRLERYQKGQADRGLEVLLFQYGRYLLMGSSRPGSQPANLQGIWNDRVQPPWNSNYTTNINTQMNYWPAEVCNLAECHEPLLHMIGEVSRTGRRVASIHYGAQGWTAHHNIDVWRYAGPSAGHASWAFWPLGGVWLTAHLWERYLFTLDTTYLAEQAYPLMKGAAAFCLDWLAEGPDGRLATSPSTSPENKFITPGGEDCSISMGSTMDMTLIRELLSNCIQAADLLELDDEFRKRCEETRERLVPYQIGRHGQLQEWLVDFEEAEPGHRHVSHLYGVYPGRQIHIRDTPELAEAARISLRRRLDHGGGHTGWSCAWLINLYARLEDGDTAHRYVRTLLSRSTYPNLFDAHPPFQIDGNFGATAGIAEMLLQSRLGELTLLPALPSAWPEGRVSGLKGCGGITVSMEWSGSRLVRAELTASVQTGSCTIRSAHPFSADARQAQPDPKHGGFILSWIFTKKQEKTNEHTIIIEGEGETQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAE3</accession>
    <name>E3EAE3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 14">Undecaprenyl-diphosphatase</fullName>
            <ecNumber evidence="4 14">3.6.1.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13 14">Bacitracin resistance protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12 14">Undecaprenyl pyrophosphate phosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">uppP</name>
        <name evidence="15" type="synonym">bacA3</name>
        <name evidence="15" type="ORF">PPSC2_21630</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 14">
            <text>di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:28094"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60392"/>
            <dbReference type="EC" id="3.6.1.27"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="14">Cell membrane</location>
            <topology evidence="14">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="14">Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 14">Belongs to the UppP family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.27" evidence="4 14"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58561.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08825"/>
    <dbReference type="EnsemblBacteria" id="ADO58561">
        <property type="protein sequence ID" value="ADO58561"/>
        <property type="gene ID" value="PPSC2_21630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4599"/>
    <dbReference type="eggNOG" id="COG1968">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060296_2_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050380">
        <property type="term" value="F:undecaprenyl-diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016311">
        <property type="term" value="P:dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01006">
        <property type="entry name" value="Undec_diphosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003824">
        <property type="entry name" value="UppP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30622">
        <property type="entry name" value="PTHR30622"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02673">
        <property type="entry name" value="BacA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00753">
        <property type="entry name" value="undec_PP_bacA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 14" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="6 14" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0133">Cell shape</keyword>
    <keyword evidence="14" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="8 14 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="37"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="106"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="136"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="208"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="236"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00021581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00032707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00032932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO58561.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="257" mass="28336" checksum="4F69C0B108F2B0BB" modified="2015-05-27" version="2">MGIIEGLTEFLPVSSTGHMILTADLLGLNTENDTVKTFEVIVQLGAVMAVVVLYWRRFLSLFDFRRKISSQPRLNLLHIILAMIPAGLIGVLFRDVIKQYLFGPETVLYSLVIGGLLMIAAEKFHPPIRSHTLDEITYKQAFTIGVFQVLALWPGFSRSGSTMSGGLFARVSHTAAAEFTFLVSVPVMLGASGIDMIKSMDHLSMSDFPVFAAGFITAFIVGMLAIKTFLGLLKRLSLTTFAIYRFVLAAVFFFIIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAH7</accession>
    <name>E3EAH7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphonate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">phnC3</name>
        <name evidence="6" type="ORF">PPSC2_21785</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58595.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025674722.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08920"/>
    <dbReference type="EnsemblBacteria" id="ADO58595">
        <property type="protein sequence ID" value="ADO58595"/>
        <property type="gene ID" value="PPSC2_21785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4635"/>
    <dbReference type="eggNOG" id="COG3638">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03256">
        <property type="entry name" value="ABC_PhnC_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012693">
        <property type="entry name" value="ABC_transpr_PhnC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02315">
        <property type="entry name" value="ABC_phnC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0918">Phosphonate transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58595.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="256" mass="28202" checksum="8A78A62982E16586" modified="2015-05-27" version="2">MIEFRNVSKTYPNGTKGLNNINLTIQEGEMVVIVGLSGAGKSTLLRSINRLHDITSGDIVVGGRSVTSAGGSELRRIRRDIGMIFQSFNLVKRSTVLRNVLSGRVGYHSTLRTILGLFPKEDIELALTALERVNIREKAYSRADELSGGQQQRVSIARALAQEAKIILADEPVASLDPLTTRQVMDDLQRINREMQITTIVNLHFIDLAREYATRIIGLRAGEVVFDGTPEEATDEAFAEIYGRAIKHDELLGVGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAH9</accession>
    <name>E3EAH9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Phosphate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ptxC</name>
        <name evidence="7" type="ORF">PPSC2_21795</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373164.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08930"/>
    <dbReference type="EnsemblBacteria" id="ADO58597">
        <property type="protein sequence ID" value="ADO58597"/>
        <property type="gene ID" value="PPSC2_21795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4637"/>
    <dbReference type="eggNOG" id="COG3639">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064254_1_0_9"/>
    <dbReference type="OMA" id="RFAIIGR"/>
    <dbReference type="OrthoDB" id="1209768at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005769">
        <property type="entry name" value="PhnE/PtxC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01097">
        <property type="entry name" value="PhnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="74"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="265" mass="29077" checksum="11FDB88D55B53AD7" modified="2011-01-11" version="1">MNDPTLRRPIGSRLRFWALAILLIIIYIWAFRGMQFEGLQGTAKSVSVAILGGFLHPDWSFVYIPEGEDLLRGLLDTLVISVLGTFVSAFVCLPFAFWASSNMSRLRPLSGSGKFVLSVIRVFPEMIVAILFIKAVGPGSFAGVLALGIHSIGMLAKLFSETIESVDHGPQEALIACGANRWQVIFFAVLPQVIPQFLSYSLYRFEINIRSATTLGLVGAGGIGTPLLFALQMRNWNRVGVILLGIVVLIILTDLVSGWLRKRIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAL1</accession>
    <name>E3EAL1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_22680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4827"/>
    <dbReference type="EnsemblBacteria" id="ADO58769">
        <property type="protein sequence ID" value="ADO58769"/>
        <property type="gene ID" value="PPSC2_22680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4803"/>
    <dbReference type="HOGENOM" id="CLU_2827136_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="66" mass="7761" checksum="B2154058CEFC0CBB" modified="2011-01-11" version="1">MVDEELTYTLNIINSEIPVERSYPKGKIPTKISPLKGNLQLIKILLNLYLHKYDFKNNMKVIKEEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAS8</accession>
    <name>E3EAS8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uroporphyrinogen-III synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hemD</name>
        <name evidence="2" type="ORF">PPSC2_23710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373528.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11215"/>
    <dbReference type="EnsemblBacteria" id="ADO58992">
        <property type="protein sequence ID" value="ADO58992"/>
        <property type="gene ID" value="PPSC2_23710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5018"/>
    <dbReference type="eggNOG" id="COG1587">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011276_9_1_9"/>
    <dbReference type="OMA" id="DAVCFTT"/>
    <dbReference type="OrthoDB" id="1185397at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004852">
        <property type="term" value="F:uroporphyrinogen-III synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006780">
        <property type="term" value="P:uroporphyrinogen III biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06578">
        <property type="entry name" value="HemD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10090">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036108">
        <property type="entry name" value="4pyrrol_syn_uPrphyn_synt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003754">
        <property type="entry name" value="4pyrrol_synth_uPrphyn_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039793">
        <property type="entry name" value="UROS/Hem4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40082">
        <property type="entry name" value="PTHR40082"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02602">
        <property type="entry name" value="HEM4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69618">
        <property type="entry name" value="SSF69618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HEM4" evidence="1">
        <location>
            <begin position="20"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="31638" checksum="B67E4189DB4F449A" modified="2011-01-11" version="1">MAQRMAGKRVALAGPRKAEEMALLVMKMGGEPVERPAQGTVFLDDIELRNAVVSWVKNPPDWYIFTTGMGLDALFDMAEDMGVAEQIIELLQSSNIAARGYKTVNGLKKRGFTPAVRDEDGSLIGLTRAFAPYDLKGKEVLLQLHGDPAPRLVEWLDEQGAVTRQVLPYKHIPPEEAKLQALLDDVINRTIDAVTFTSGPQIRFLAQYAREQNRFEDLLEAFREDVIAVSVGKVTAQSILEEGIERIVFPTEERMGAMMVELGKYFEHSDSVHGCGLKSVNGHLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAU9</accession>
    <name>E3EAU9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nsrR3</name>
        <name evidence="1" type="ORF">PPSC2_23810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373549.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5074"/>
    <dbReference type="EnsemblBacteria" id="ADO59013">
        <property type="protein sequence ID" value="ADO59013"/>
        <property type="gene ID" value="PPSC2_23810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5038"/>
    <dbReference type="eggNOG" id="COG1959">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107144_4_3_9"/>
    <dbReference type="OMA" id="RSIDCEV"/>
    <dbReference type="OrthoDB" id="1794390at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18302" checksum="168FC27BF5A57851" modified="2011-01-11" version="1">MNSEKRLRTATPKWLGIALKALVYLEKHGELCASGSIARSIDCEVTLVRRVLTRLVQADLIAAREGREGGYVLTRSADHITLADIYHAIEICDPIFPGMMHEPETNPFCGELAIAVSEILAESERRMLEVWESHTLASLAKRTSLVVGNCNHTEDKDAKSSSQRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAZ0</accession>
    <name>E3EAZ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Voltage-gated potassium channel</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_24955</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the shaker potassium channel beta subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373803.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59270">
        <property type="protein sequence ID" value="ADO59270"/>
        <property type="gene ID" value="PPSC2_24955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5288"/>
    <dbReference type="eggNOG" id="COG0667">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_0_9"/>
    <dbReference type="OMA" id="TANAYNR"/>
    <dbReference type="OrthoDB" id="1351747at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005399">
        <property type="entry name" value="K_chnl_volt-dep_bsu_KCNAB-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43150">
        <property type="entry name" value="PTHR43150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01577">
        <property type="entry name" value="KCNABCHANNEL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0407">Ion channel</keyword>
    <keyword evidence="3" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="2">
        <location>
            <begin position="15"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="35645" checksum="F18A928E058773AA" modified="2011-01-11" version="1">MRYRNVGNSGLKISEIGLGSWLTYGTAAEQEAAHTCIAKAFELGINFFDTANAYNRGEGEKAMGAALKPYRRESYVLSTKVFFPMDSGPNDRGLSRKHIMEQCEASLKRLGTDYIDMYFCHRYDPDTPLEETLRALDDLQAQGKILYAAVSEWSAAQLTDAYGIGKRLNLRPLIANQPIYNMFERYIEHEVLPVSGQVGIGQIVFSPLAQGILTGKYKPGQPIPTGSRGADASVNSVISSYMNDTVLNCVQELDKLAKDLGVTLSQLALAWILREPGISAALIGATKPAQIEENVKAVEMTLQPETCAEIEQILKQAEGFEPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB73</accession>
    <name>E3EB73_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA-directed RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sigX</name>
        <name evidence="4" type="ORF">PPSC2_20805</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372974.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4456"/>
    <dbReference type="EnsemblBacteria" id="ADO58405">
        <property type="protein sequence ID" value="ADO58405"/>
        <property type="gene ID" value="PPSC2_20805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4437"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_4_9"/>
    <dbReference type="OMA" id="ESSERTW"/>
    <dbReference type="OrthoDB" id="1914729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="2">
        <location>
            <begin position="9"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="3">
        <location>
            <begin position="111"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="19011" checksum="E13F9D968F247B83" modified="2011-01-11" version="1">MDIKDLEDLYVSCKSDLFGYLLRMLHNKQDAEDLLQECFIRFIRASPDLPEDRIRFYLLRIAKNLAIDLMRKRKKMDEYTLRKEMLYYHWDTFDFEIQEEVNRILLLASNTEQRTVLELRLVQGYSIKETARILNKSENAVKSSLHRASQRIKLKYIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBB7</accession>
    <name>E3EBB7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Magnesium transporter MgtC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mgtC3</name>
        <name evidence="8" type="ORF">PPSC2_21100</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MgtC/SapB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373018.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08330"/>
    <dbReference type="EnsemblBacteria" id="ADO58449">
        <property type="protein sequence ID" value="ADO58449"/>
        <property type="gene ID" value="PPSC2_21100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4486"/>
    <dbReference type="eggNOG" id="COG1285">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079292_0_1_9"/>
    <dbReference type="OMA" id="PWIIDDS"/>
    <dbReference type="OrthoDB" id="2022224at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003416">
        <property type="entry name" value="MgtC/SapB/SrpB/YhiD_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33778">
        <property type="entry name" value="PTHR33778"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02308">
        <property type="entry name" value="MgtC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01837">
        <property type="entry name" value="MGTCSAPBPROT"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="26318" checksum="485B9D6A2EEF5306" modified="2011-01-11" version="1">MNNPWIIDDSHVILRLLLSMLLGGFIGFERERSNHAAGLRTHIMVSLGSTLIMLLSIYGFADFIKEANVRIDPARLATAVITGVGFLGAGTIMFTGKSITGLTTAASIWVVAAIGLGVGAGFYLPSIAATVLVFLNLWVFNKLELRYMRGRKPHLITLYGLSSHGLLDQISTYLEQEKVEIRKIMIKEHEHVPFHELHPDRQSMEVSLEVLARHDFNAVRIAADLRQWEDIAAVSVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBK2</accession>
    <name>E3EBK2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Argininosuccinate synthase</fullName>
            <ecNumber evidence="2 9">6.3.4.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">Citrulline--aspartate ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">argG</name>
        <name evidence="10" type="ORF">PPSC2_22905</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-aspartate + L-citrulline = 2-(N(omega)-L-arginino)succinate + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10932"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57472"/>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.4.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the argininosuccinate synthase family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.5" evidence="2 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373358.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10380"/>
    <dbReference type="EnsemblBacteria" id="ADO58820">
        <property type="protein sequence ID" value="ADO58820"/>
        <property type="gene ID" value="PPSC2_22905"/>
    </dbReference>
    <dbReference type="GeneID" id="66575486"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4850"/>
    <dbReference type="eggNOG" id="COG0137">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032784_4_2_9"/>
    <dbReference type="OMA" id="QCEVVTF"/>
    <dbReference type="OrthoDB" id="357142at2"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004055">
        <property type="term" value="F:argininosuccinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01999">
        <property type="entry name" value="Argininosuccinate_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00005">
        <property type="entry name" value="Arg_succ_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001518">
        <property type="entry name" value="Arginosuc_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018223">
        <property type="entry name" value="Arginosuc_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023434">
        <property type="entry name" value="Arginosuc_synth_type_1_subfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024074">
        <property type="entry name" value="AS_cat/multimer_dom_body"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11587">
        <property type="entry name" value="PTHR11587"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00764">
        <property type="entry name" value="Arginosuc_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69864">
        <property type="entry name" value="SSF69864"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00032">
        <property type="entry name" value="argG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00564">
        <property type="entry name" value="ARGININOSUCCIN_SYN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00565">
        <property type="entry name" value="ARGININOSUCCIN_SYN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 9" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="9"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="281"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="45333" checksum="609C29599CBE0C6F" modified="2011-01-11" version="1">MAKEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYIDDLRDEFAKDFIYPMFQAGALYEGQYLLGTSIARPLIAKRMVDIAIAEGATAIAHGATGKGNDQVRFELNAAALTPDIQVIAPWRLEEFRNQFPGRAEMIAYAEKHGIPVTASAAKPYSMDRNLLHISYESGVLEDPWFDPSAPENKEMFLLSNAPEDAPDEAEYLELEFKAGNCVALNGEQLTPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYETPGGTILFTAHRKMESITMDREVMNLRDSLITRYATLVYNGFWFAPERVALQALVHESQKNVSGTVRVKLYKGNIIGAGVKSPVSLYNPDIATMEADPTQAYDQGDATGFIRLNALRLKVNAGVTQNHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM5</accession>
    <name>E3EBM5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CDP-glucose 4,6-dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ddhB</name>
        <name evidence="2" type="ORF">PPSC2_23010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373381.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4903"/>
    <dbReference type="EnsemblBacteria" id="ADO58843">
        <property type="protein sequence ID" value="ADO58843"/>
        <property type="gene ID" value="PPSC2_23010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4874"/>
    <dbReference type="eggNOG" id="COG0451">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_1_7_9"/>
    <dbReference type="OMA" id="CYENREW"/>
    <dbReference type="OrthoDB" id="1180629at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd05252">
        <property type="entry name" value="CDP_GD_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013445">
        <property type="entry name" value="CDP_4_6_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02622">
        <property type="entry name" value="CDP_4_6_dhtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="10"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="356" mass="40404" checksum="455718CEE8AE3FB5" modified="2011-01-11" version="1">MLFWKGKKVLITGHTGFKGSWISIWLQKLGAEVMGFSMEPLTTPNLFSQAEVGSGMQTTYGDIRDFNQLKQLICSFEPEIIFHMAAQSLVRKSYLDPLETFSTNIIGTANLFEAARSVDSLRVIINVTSDKCYENKEWIWGYRENEPLGGSDPYSASKGCAELITTSYRSSFFSDGPSVASVRAGNVIGGGDWAEDRLVPDIIRSIVSNKIIFIRNPCSVRPWQHVLEPLYGYLLLAERMWFDGKEYGDSWNIGPGDQEAVSVETLLRLFENAWGESLNIQYDDKGNHPHEANYLRLDCSKAKLKLGWSSLLSVDTSIDWVVDWTRAYIQGEDMRRVTLNQISYFEEIIKEHSHHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBZ4</accession>
    <name>E3EBZ4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">2,3-bisphosphoglycerate-dependent phosphoglycerate mutase</fullName>
            <shortName evidence="4">BPG-dependent PGAM</shortName>
            <shortName evidence="4">PGAM</shortName>
            <shortName evidence="4">Phosphoglyceromutase</shortName>
            <shortName evidence="4">dPGM</shortName>
            <ecNumber evidence="4 5">5.4.2.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gpmA</name>
        <name evidence="6" type="synonym">gpmA3</name>
        <name evidence="6" type="ORF">PPSC2_24275</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 5">
            <text>(2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate</text>
            <dbReference type="Rhea" id="RHEA:15901"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:58289"/>
            <dbReference type="EC" id="5.4.2.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 5">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 3/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.11" evidence="4 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373653.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11795"/>
    <dbReference type="EnsemblBacteria" id="ADO59118">
        <property type="protein sequence ID" value="ADO59118"/>
        <property type="gene ID" value="PPSC2_24275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5140"/>
    <dbReference type="eggNOG" id="COG0588">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033323_1_1_9"/>
    <dbReference type="OMA" id="RMLPYWY"/>
    <dbReference type="OrthoDB" id="1122642at2"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00186"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046538">
        <property type="term" value="F:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01039">
        <property type="entry name" value="PGAM_GpmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001345">
        <property type="entry name" value="PG/BPGM_mutase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005952">
        <property type="entry name" value="Phosphogly_mut1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11931">
        <property type="entry name" value="PTHR11931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01258">
        <property type="entry name" value="pgm_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00175">
        <property type="entry name" value="PG_MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="2 4" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="8"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="21"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="87"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="114"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="183"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="4">
        <location>
            <position position="9"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="4">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="98"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="4">
        <location>
            <position position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="29017" checksum="4484148F09F2C969" modified="2011-01-11" version="1">MYQVVLVRHGESVYNRQNLFTGWTDVDLTEQGTHEAIEAGRILKEAGYTFDLAFASVLKRSIRTLYHILDELDHLWIPVQKSWKLNERHYGALQGHSKLDSAVQYGEEQVHIWRRSLTVRPPMLDAQDERSPHREERYRHIKPEELPLGESLEDTVHRVGEFWKQRIMPLILKKERVIISAHGNTLRALIKYMENLDETALLDLNIPTGIPLVYELDEHIDPIRRFYLGDPSHVEAKKQAVANQSKVTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC45</accession>
    <name>E3EC45_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation initiation inhibitor Soj</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">soj</name>
        <name evidence="2" type="ORF">PPSC2_25480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373915.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12975"/>
    <dbReference type="EnsemblBacteria" id="ADO59385">
        <property type="protein sequence ID" value="ADO59385"/>
        <property type="gene ID" value="PPSC2_25480"/>
    </dbReference>
    <dbReference type="GeneID" id="66574972"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5400"/>
    <dbReference type="eggNOG" id="COG1192">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037612_1_4_9"/>
    <dbReference type="OMA" id="VQCEYFA"/>
    <dbReference type="OrthoDB" id="729012at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="2"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="27562" checksum="DF84914FC0E71A25" modified="2011-01-11" version="1">MSKIIAVANQKGGVGKTTTSVNLGAGLASLGKRVLLVDIDPQGNTTSGVGINKADVANCIYDVLINEVDPSEAIISTQVEGLDIIPATIQLAGAEIELVPTISRELRLKRSLQLVKHNYDYILIDCPPSLGILTLNSLTASDSVIIPIQCEYYALEGLSQLLNTVRLVQKHLNTSLQIEGVLLTMFDARTNLGIQVIEEVKKYFQSKVYQTIIPRNVRLSEAPSHGQSIITYDPRSRGAEVYIELAKEVVSYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC64</accession>
    <name>E3EC64_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-359</name>
        <name evidence="3" type="ORF">PPSC2_01115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368850.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0220"/>
    <dbReference type="EnsemblBacteria" id="ADO54207">
        <property type="protein sequence ID" value="ADO54207"/>
        <property type="gene ID" value="PPSC2_01115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.211"/>
    <dbReference type="eggNOG" id="COG0607">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_846891_0_0_9"/>
    <dbReference type="OrthoDB" id="1216593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168812" evidence="1">
        <location>
            <begin position="25"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="65"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="37212" checksum="D191AA3F383BA9D4" modified="2011-01-11" version="1">MKRLLITALLVVGLMNWNTDSIFAEEEIDAIGTQIILQVANPNILVNGEEKLLDSATGAAPISYKGTTFLPVKNLVELLGGSLEYSKLAQRYQIQLDGKTVQLRADSKQATVDGQVRMLSIAPVNIRGTLLVPLRVLSEHLDVKMKWDKVQQRAVLYHGGMGERWYEDNYTSKVSNKYGRYSDQSIGYKVNYPLSWGDPLVIQKNNATIETIFYESPFVKISSYSDHMLSSYSENEGLKLEETYEQYLDRHGFLDGEIKEKRTFVDKAYDIFIDDGENSYIYLVIFKEDEVGVFCIKLNQNMTSEDYKATKEWGNLLNNTFEADSAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC78</accession>
    <name>E3EC78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Asparagine synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">asnH</name>
        <name evidence="8" type="ORF">PPSC2_01185</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the asparagine synthetase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368864.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0234"/>
    <dbReference type="EnsemblBacteria" id="ADO54221">
        <property type="protein sequence ID" value="ADO54221"/>
        <property type="gene ID" value="PPSC2_01185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.226"/>
    <dbReference type="eggNOG" id="COG0367">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014658_3_3_9"/>
    <dbReference type="OMA" id="YANNIPP"/>
    <dbReference type="OrthoDB" id="610569at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004066">
        <property type="term" value="F:asparagine synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006529">
        <property type="term" value="P:asparagine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01991">
        <property type="entry name" value="Asn_Synthase_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00712">
        <property type="entry name" value="AsnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006426">
        <property type="entry name" value="Asn_synth_AEB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001962">
        <property type="entry name" value="Asn_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033738">
        <property type="entry name" value="AsnB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00733">
        <property type="entry name" value="Asn_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13537">
        <property type="entry name" value="GATase_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001589">
        <property type="entry name" value="Asn_synthetase_glu-h"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01536">
        <property type="entry name" value="asn_synth_AEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0061">Asparagine biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="7">
        <location>
            <begin position="2"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="active site" description="For GATase activity" evidence="5">
        <location>
            <position position="2"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="744" mass="85799" checksum="BD1FDFF21F5D656F" modified="2011-01-11" version="1">MCGIAGVVRLDGTSLSQNVDTILQNMAEEISYRGPDDEQFFIKGPLGFAFRRLSIVDINGGKQPLTNEDGTIVLIANGEIYNSTELRAKLSSRHQYKTNSDCEIILHLYEEKGIDLLQDLIGMYAFALWDSRKQKMFIARDRFGIKPLFFTANRERLVFASEIKSLMKYPDCPRSLDWNKALTDPWLSGYTATDLSDPSSFFEGIEHLPAGCAVEVDVKKGSWKQIRYWDLLANNNQSFAELSDQEIINYYANLLEDSVQKCLQSDVEIGLFLSGGIDSASIAAITSERQNIHTFSVLSQSTLTNEDAKYAHITAKYLGLPNHQVLFHWDENDFEPNHWRKLLWLCESPLCGPEQLYKFHLHRYARSVCPDLKVILTGQGSDEFNGGYSSVLAPAWENNWEGFTKNLNRLEMGRYMSNLPSKLFVWEEHFEQSPLSEKFILSKSSEVRRESSWEAYILTKFRDIQMYNCWLEDRIAAGNSIENRVPFLDHRIVEFALSIPSARRKGLFWDKKLLRSGIQNRLPSELYKRSKVPFFYGEDARFTLRMMLDLLLKQKSVLLEEAVASSKFSDFIDTDAFFSIAQQLSQDPEVTNMEYFLRIVNMGLLQHMVEQTNVKYEDSDNFIILSNHPIENWEKNEEEIHLKLSKRREAIKLEDIPLFAPEVFLVQRDDIQKDNHAYLVVDNHLTYALSEDEAGQWLRVLRKINGEQSLKEILSDLDITESEIRKFLEEAIDFGVITMKPIAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECH9</accession>
    <name>E3ECH9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Sucrose-6-phosphate hydrolase</fullName>
            <ecNumber evidence="3 8">3.2.1.26</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7 9">Invertase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">scrB3</name>
        <name evidence="12" type="ORF">PPSC2_01655</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Enables the bacterium to metabolize sucrose as a sole carbon source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.</text>
            <dbReference type="EC" id="3.2.1.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Glycan biosynthesis; sucrose metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.26" evidence="3 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368964.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14425"/>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54322">
        <property type="protein sequence ID" value="ADO54322"/>
        <property type="gene ID" value="PPSC2_01655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.331"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001528_7_1_9"/>
    <dbReference type="OMA" id="WMGVPDG"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="UniPathway" id="UPA00238"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004564">
        <property type="term" value="F:beta-fructofuranosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005985">
        <property type="term" value="P:sucrose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018053">
        <property type="entry name" value="Glyco_hydro_32_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006232">
        <property type="entry name" value="Suc6P_hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01322">
        <property type="entry name" value="scrB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00609">
        <property type="entry name" value="GLYCOSYL_HYDROL_F32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="10">
        <location>
            <begin position="37"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="11">
        <location>
            <begin position="341"/>
            <end position="484"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="491" mass="56572" checksum="DB0548B6E04496BA" modified="2011-01-11" version="1">MKMTKEQKYRLIEQAEPGEIASLQKKVEQCQWRQSFHIQPPTGLLNDPNGFSYYQGEYHLFYQWFPLGTDHGMKYWYHLKSKDLVTWHSAGIGITPGDDFDSHGAYSGSALEHEDKLYMMYTGNTRDENWIRHPYQCMAVMDESGRITKWEHPVIDHVPEGYTDHFRDPKLWKDGDSFYCVIGAQRTNSTGCVVLYRSTDLHTWQFEGELNTGLESFGYMWECPDYFELNGAGVLVFSPQGLEPSGDENQNIYQSGYVIGKLLNTETRTLEHGAFHELDRGFDFYAPQTMIDPQGRRIMVAWMGLPDIEYPTDPNGWAHCLTLPRELTLHEGKLLQRPIPELTTLRRNSEDRVADTLSSESKTYEGFKGTAYELICEVDLLDAKAFGIEFRASETEKTVIKYNAVSRKLVLDRSQSGEPVAAEYGEVRQCAWDKDHIKLHLFVDTSSVEIFINDGEEVFTSRIFPHPESDEIRFFADKGEALFQAVKWNFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECI5</accession>
    <name>E3ECI5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Glycoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yxiA1</name>
        <name evidence="9" type="ORF">PPSC2_01685</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 43 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368970.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14475"/>
    <dbReference type="CAZy" id="GH43">
        <property type="family name" value="Glycoside Hydrolase Family 43"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54328">
        <property type="protein sequence ID" value="ADO54328"/>
        <property type="gene ID" value="PPSC2_01685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.337"/>
    <dbReference type="eggNOG" id="COG3507">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009397_1_1_9"/>
    <dbReference type="OMA" id="VLQFTIH"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032291">
        <property type="entry name" value="Abn2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006710">
        <property type="entry name" value="Glyco_hydro_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006558">
        <property type="entry name" value="LamG-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16369">
        <property type="entry name" value="GH43_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04616">
        <property type="entry name" value="Glyco_hydro_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00560">
        <property type="entry name" value="LamGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169076" evidence="7">
        <location>
            <begin position="28"/>
            <end position="811"/>
        </location>
    </feature>
    <feature type="domain" description="LamGL" evidence="8">
        <location>
            <begin position="670"/>
            <end position="803"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="258"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity, responsible for pKa modulation of the active site Glu and correct orientation of both the proton donor and substrate" evidence="6">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR606710-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="811" mass="88172" checksum="46F062EADB3D9F92" modified="2011-01-11" version="1">MKQLFVRKVTAASLAGALLLPASLVGAESTLNSDTAGIQSVEQTSLQAQGLENVLSQSKKAVSFKETSVHDPSILKVKDIFYIFGSHLAAAKSKDLMNWDTIATGVANGNALIPNVKEELKEALDWAQTDTLWAADVIQLADGKFYMYYNACKGDSPRSAMGLAVADKIEGPYKNKGIFLKSGMWDQPSEDGTIYDATKHPNAVDPDTFYDKNGKLWMVYGSYSGGIFIMQMDEKTGKPLPGQSYGKKLTGGNHARMEGPYIQYSPQTDYYYLFLSYGGLSADGGYNLRVARSKTPDGPFYDAEGNDMIKVKANPDKPLFDDASIEPYGVKLIGNYLIPREIGDPGTGLGTGYVSPGHNSAYYDPKTKKHFVIFHSRFPGRGEQFEVRVHEMFMNADGWPVVAPYRYTGDEDSLKKLSEKDVIGQYSYVNHGKEISANIKQAVTVNLDRGGKLSGGVNGTWKLGADNQLEITADGAKYKGVFLRHRDPDTGAKTLAFTALSSKGVAVWGSLKPDLKASKIVAAVQKDLSLGDTSNVFYDLTLPTQAAQDTTISWESSRPEIISVTGEVYRPEAGSQPAAVTLTATIKKDKATAKKSFTAIVPEQAQGPQLARYSWSEDQGTSVVDSTYNQLDGKTYGGATWDKDGKLGGALSLNGKDGYVQLPNTVTDAKDFTFSAWVNWKGGAAWQRIFDFGNGQARHMFLTPSQGSGVLQFTIHEGTDQSLLSKSSLPLNQWTHVAVTLEGNTGKLYVNGEEVAVNDGITFNPNELLTNEAYLGKSRFVADAYFNGSLDEVQLYNKALTAEEIKALADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECL1</accession>
    <name>E3ECL1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">IclR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">kdgR1</name>
        <name evidence="5" type="ORF">PPSC2_03975</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369419.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16780"/>
    <dbReference type="EnsemblBacteria" id="ADO54783">
        <property type="protein sequence ID" value="ADO54783"/>
        <property type="gene ID" value="PPSC2_03975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.790"/>
    <dbReference type="eggNOG" id="COG1414">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062618_4_1_9"/>
    <dbReference type="OMA" id="DTTETIH"/>
    <dbReference type="OrthoDB" id="370329at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014757">
        <property type="entry name" value="Tscrpt_reg_IclR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005471">
        <property type="entry name" value="Tscrpt_reg_IclR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09339">
        <property type="entry name" value="HTH_IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01614">
        <property type="entry name" value="IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00346">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51077">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51078">
        <property type="entry name" value="ICLR_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH iclR-type" evidence="3">
        <location>
            <begin position="8"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="IclR-ED" evidence="4">
        <location>
            <begin position="70"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="247" mass="27123" checksum="D888D5ADADDFC96E" modified="2011-01-11" version="1">MEDRKLTVRAVERALDILLCFTAESDLGLTEIASQIGLHKSTVHRLLTTLEDRGFVVRNAETEKYRLGFRIWELSTHLSQSDEPAVLLQPAMEGLRDRLGETVSLYLRDGSMRIRIQAVQSNQAIRRVAPVGARMPLAVGASSKVLAAFMPPQELEVLLSSEEWPPSVDPEVYKAQLQDIREKGYATSYEEREPGAAAVAAPIVNRKGQVAAALSVSGPVSRLAPETLHDFAPVLIEAAKEMGLMLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECQ3</accession>
    <name>E3ECQ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lacG</name>
        <name evidence="7" type="ORF">PPSC2_01775</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368987.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14565"/>
    <dbReference type="EnsemblBacteria" id="ADO54347">
        <property type="protein sequence ID" value="ADO54347"/>
        <property type="gene ID" value="PPSC2_01775"/>
    </dbReference>
    <dbReference type="GeneID" id="66574626"/>
    <dbReference type="KEGG" id="ppm:PPSC2_01775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.356"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_1_9"/>
    <dbReference type="OMA" id="LFWVYIA"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="81"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="152"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="191"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="249"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="81"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="31717" checksum="7DA09B125FF09BE8" modified="2011-01-11" version="1">MKTAVQQARANTRSGEKTFQWFVAILLTVGGLLMVLPFAWMILSSFKTEGEVTKIPPTIWPEHFTLDNFKILFDSMAFGTYLTNTLIIVLASFFGLFLNAMAGYGFAKFQFKGKGFLFYLVLATMMIPGQVTMIPVYLILNQMGLTNSMLGIVLPGLVGAFAIFLFRQFMSDIPEELLEATRLDGAGEFRTFLQIVLPISTPIIAVQAILTFIGGWNSFLWPLIIANDEKLYTLSVGLSLLKGQNESQFALQMAGSTFMVVPIMIIFIIFQKYIIENYTISGIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECQ6</accession>
    <name>E3ECQ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Multidrug ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pstB1</name>
        <name evidence="5" type="ORF">PPSC2_01785</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368990.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0366"/>
    <dbReference type="EnsemblBacteria" id="ADO54350">
        <property type="protein sequence ID" value="ADO54350"/>
        <property type="gene ID" value="PPSC2_01785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.359"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="IALAHNH"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="3"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="32811" checksum="2CD5AD5995D3802E" modified="2011-01-11" version="1">MTIDIQALSKSYGSHQVLNELHFHIDNGIFGLLGDNGAGKTTLMKILATLLRFDRGEVEIFGHSLKKEPDAIRSLLGYLPQYFDFFPNVTILESMNYFAALKGIQGKHHIQEETSQRLIEVGLIDQVDKKIKQLSGGMKQRLGIAQAMLGQPKLLIVDEPTVGLDPKERIAFRNLLQNYGEDRIILLSTHIVPDVSSTCDKLLVLKEGRCLYQGAIDDMIRTVEGKVWLVDVGKRQLEQLSQQARITSIVRKEGRVQARLLCNYPPDCCTEVTPETANLEDAYLYISDPEES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED39</accession>
    <name>E3ED39_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YclD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yclD</name>
        <name evidence="1" type="ORF">PPSC2_02145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369036.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14910"/>
    <dbReference type="EnsemblBacteria" id="ADO54396">
        <property type="protein sequence ID" value="ADO54396"/>
        <property type="gene ID" value="PPSC2_02145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.405"/>
    <dbReference type="eggNOG" id="ENOG5032TVI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_134270_0_0_9"/>
    <dbReference type="OMA" id="EQWTFDA"/>
    <dbReference type="OrthoDB" id="1838368at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="17032" checksum="15E08E10EB8E7281" modified="2011-01-11" version="1">MQTPRIGKELFTLLNGKELEHKQQEAMMLLTVTEDQWPHIAMISVGEVVALDEGNLRLALWPGTTTTGNMIRTGKATLAVFTGGKAHYVRLSLKHLPALPGAKHVRERFAAHVFAAREDSAQYADILTGVTIRLKEPESVIHRWKETVAELLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED48</accession>
    <name>E3ED48_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppB1</name>
        <name evidence="7" type="ORF">PPSC2_02185</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369045.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14950"/>
    <dbReference type="EnsemblBacteria" id="ADO54405">
        <property type="protein sequence ID" value="ADO54405"/>
        <property type="gene ID" value="PPSC2_02185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.414"/>
    <dbReference type="eggNOG" id="COG0601">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036879_1_2_9"/>
    <dbReference type="OMA" id="TFVVIQF"/>
    <dbReference type="OrthoDB" id="1479518at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="189"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="244"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="289"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="97"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="35625" checksum="0BC966461BBABE0E" modified="2011-01-11" version="1">MWKFTMRRLLVMIPQLFALSVLIFFLAKAMPGDALTGLITSTPNLNPAALEEQRQRLGLNDPVWVQYGNWLVQLAHGDLGKSYVHKISVTDLIGSRLGNTFFLGVVILVLTYLIAIPLGVLSGRYQHSLLDKTVVGYTYLSFATPLFILALLLLYVFGFRLGWFPTSGSVDVGVEPGTWSYYVNKSYHLILPAVTGALLSTTATIQYLRNEVIDTRLKDFVKTARSKGVPEGKIYSRHIFKNSLLPIAAFLGYDLTGVIAGNVFLESIFGYPGLGQLFLQSITQRDFSVVNALVMISGFLALLGTLLSDVILSKVDPRIRIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDF3</accession>
    <name>E3EDF3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">3-dehydroquinate dehydratase</fullName>
            <shortName evidence="5">3-dehydroquinase</shortName>
            <ecNumber evidence="5">4.2.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Type I DHQase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Type I dehydroquinase</fullName>
            <shortName evidence="5">DHQ1</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">aroD</name>
        <name evidence="6" type="ORF">PPSC2_04655</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>3-dehydroquinate = 3-dehydroshikimate + H2O</text>
            <dbReference type="Rhea" id="RHEA:21096"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="EC" id="4.2.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the type-I 3-dehydroquinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369565.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17550"/>
    <dbReference type="EnsemblBacteria" id="ADO54932">
        <property type="protein sequence ID" value="ADO54932"/>
        <property type="gene ID" value="PPSC2_04655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.935"/>
    <dbReference type="eggNOG" id="COG0710">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064444_0_0_9"/>
    <dbReference type="OMA" id="ATMAMGE"/>
    <dbReference type="OrthoDB" id="1298468at2"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046279">
        <property type="term" value="P:3,4-dihydroxybenzoate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00502">
        <property type="entry name" value="DHQase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00214">
        <property type="entry name" value="AroD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018508">
        <property type="entry name" value="3-dehydroquinate_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001381">
        <property type="entry name" value="DHquinase_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01487">
        <property type="entry name" value="DHquinase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01093">
        <property type="entry name" value="aroD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01028">
        <property type="entry name" value="DEHYDROQUINASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="3 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0704">Schiff base</keyword>
    <feature type="region of interest" description="3-dehydroquinate binding" evidence="5">
        <location>
            <begin position="47"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="5">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="5">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>3-dehydroquinate</name>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>3-dehydroquinate</name>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="233"/>
        </location>
        <ligand>
            <name>3-dehydroquinate</name>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>3-dehydroquinate</name>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="27961" checksum="E388712AC94508E1" modified="2011-01-11" version="1">MGKIVKINDVRIGEGAPKICVPMVGETLEQLKEEAAHLRTLDLDIVEWRVDFFEHVEDLEKVKAALHEIRSILANIPLVFTFRSAREGGEKEISAASYVELNRTIAATGQVELIDVELFNEEADVKTLVEAAHKHNVYVIISNHDFQKTPSKEEIVSRLRKAQELGGDLPKIAVMPTNTADVLTLLDATRTMAEEYADRPIITMSMAGKGVVSRLTGELFGSALTFGAAKKASAPGQIPVTELREILQVLHSHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDI1</accession>
    <name>E3EDI1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_04790</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0978"/>
    <dbReference type="EnsemblBacteria" id="ADO54960">
        <property type="protein sequence ID" value="ADO54960"/>
        <property type="gene ID" value="PPSC2_04790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.963"/>
    <dbReference type="HOGENOM" id="CLU_1244319_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="18"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="18740" checksum="E8B6465B9CE566E1" modified="2011-01-11" version="1">MEKKGDTSAIVTKANTVSFTDQSNNMSSEALQAVQEVVKQGGITDYPDGSFRPDEPLTHCGGGSSTMNPTPTSTPTPNHVPVTATVPPDQYGIVGSGDTLVDLKNVFFSADQDELSYHVITSDVYVVEAEVASQQLTLKPKSAGSTQVFVTAEDGKGGRASVFFTYTVTGSTYSSTLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDR9</accession>
    <name>E3EDR9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370008.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1398"/>
    <dbReference type="EnsemblBacteria" id="ADO55377">
        <property type="protein sequence ID" value="ADO55377"/>
        <property type="gene ID" value="PPSC2_06725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1384"/>
    <dbReference type="eggNOG" id="ENOG5032VCJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_976070_0_0_9"/>
    <dbReference type="OMA" id="DGIHYGF"/>
    <dbReference type="OrthoDB" id="1678347at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="31916" checksum="A2712EFF04EE557C" modified="2011-01-11" version="1">MDSGSNLAYGSATPLIEALIEFEQELEANRHSLSFDLGLIMEQGRAPRYMATPPDVIPFAHAGVDGIHYGFLTDFGLEKDLSQAPIVCVSPVDWTGVWVVARHLQDFLSVVYTENSSLKRYYASGADYSGHAGQRPLQAVDERTAFVRECFRERFGILPIQDMAAYIDSLRTERKQNEVAPTLNGLGIQTSSSMKRSSSIESDFLNVTEPFLWEQQGEAVRELFRSGSHEARLAFIRDAQTRHLFTHSALRAFVTGQLKLMGLSEAATYLEESYYTVIPDTMESR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDV8</accession>
    <name>E3EDV8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Putative septation protein SpoVG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">spoVG</name>
        <name evidence="5" type="ORF">PPSC2_00180</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Could be involved in septation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the SpoVG family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007428016.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13195"/>
    <dbReference type="EnsemblBacteria" id="ADO54024">
        <property type="protein sequence ID" value="ADO54024"/>
        <property type="gene ID" value="PPSC2_00180"/>
    </dbReference>
    <dbReference type="GeneID" id="66574928"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.35"/>
    <dbReference type="eggNOG" id="COG2088">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_103669_2_1_9"/>
    <dbReference type="OMA" id="KDVAHPI"/>
    <dbReference type="OrthoDB" id="1871825at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00819">
        <property type="entry name" value="SpoVG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007170">
        <property type="entry name" value="SpoVG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036751">
        <property type="entry name" value="SpoVG_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38429">
        <property type="entry name" value="PTHR38429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04026">
        <property type="entry name" value="SpoVG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160537">
        <property type="entry name" value="SSF160537"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 4" id="KW-0132">Cell division</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0717">Septation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="10557" checksum="FAE9C51F9CA4EC5D" modified="2011-01-11" version="1">MQITDVRLRRVNSEGRMKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSGTREKIQAAVLTEYERAAVDEEVAIEEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE76</accession>
    <name>E3EE76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">oppA3</name>
        <name evidence="9" type="ORF">PPSC2_04980</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369632.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17870"/>
    <dbReference type="EnsemblBacteria" id="ADO54999">
        <property type="protein sequence ID" value="ADO54999"/>
        <property type="gene ID" value="PPSC2_04980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1004"/>
    <dbReference type="eggNOG" id="COG4166">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017028_0_3_9"/>
    <dbReference type="OMA" id="YLQKQTV"/>
    <dbReference type="OrthoDB" id="162819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023765">
        <property type="entry name" value="SBP_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01040">
        <property type="entry name" value="SBP_BACTERIAL_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0564">Palmitate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169139" evidence="7">
        <location>
            <begin position="32"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="8">
        <location>
            <begin position="87"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="547" mass="61090" checksum="766D424E5DAD7358" modified="2011-01-11" version="1">MKKMHWMTIILLLAVTALAGCSSTADKTASNDSSAASQADVPQEITANLAGGEPYTLDPAFASDTTSYFVIDNLYEGLYTYDKAGKIVEGAASKVDVSPDGKTYTFTIRDGAKWSNGDPLTAKDFEYSWKRVLNPKTAAYDPSALYYIKGAEAYNTGKGKIEDVGVTAKDDKTLVVELKSPLSFFPTIAVGHAYLPVNQAVVEKSDKWAAEANTIVGNGAYVAKEWKHNEQITLTKNDQYWNKDAITMATINFKMVQDSTTYYQMYKTGDLDLILSLPVDTLDQEKSSKEFLSHPSFSVYTYSFNVKQKPFDNKKIRQAIAYAIDREALATNVTKGGETPAYGYVPYGTTTPSGKDFRDEAPKKYYEFDAAKAKQLLAEGLKEEGLTKLPPITFKYNTSDKHKKVAEAIQEMLKTNLGVEVTLENQEWKTYIDTFKQKNFQIARMGWEGNFLDPLGVLGHYTSKNSNNFTNWSNSEYDKLIESSTFELDPAKRFEQLHQAEDVLMEDLPIIPIQFSADTALISPKIQGIVFDARSNPDLRFAKRVEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE86</accession>
    <name>E3EE86_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_05025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369642.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55009">
        <property type="protein sequence ID" value="ADO55009"/>
        <property type="gene ID" value="PPSC2_05025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1014"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087539_0_0_9"/>
    <dbReference type="OMA" id="EWWIRNG"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039532">
        <property type="entry name" value="TetR_C_Firmicutes"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14278">
        <property type="entry name" value="TetR_C_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="9"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="21302" checksum="85EEBA9D9B483EDD" modified="2011-01-11" version="1">MTKVDRRILKTQESLKKAVIELMTEKNFDEITIQDIADRANVNRGTIYLHYQDKYDLLDKLIETHLNELGEMDKWACELDWTDALVPYFEYFKENYLFFSTMLASKGTPSSFRTRLFASFIEGFKGEIDRESSRNTELSEDVMLQYAGNAYVGIIEWWIRNGMPYPPQVMAKQVGVLLERSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA0</accession>
    <name>E3EEA0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Big_4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_05090</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369656.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17940"/>
    <dbReference type="EnsemblBacteria" id="ADO55023">
        <property type="protein sequence ID" value="ADO55023"/>
        <property type="gene ID" value="PPSC2_05090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1031"/>
    <dbReference type="eggNOG" id="COG3250">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3408">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3533">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002465_0_0_9"/>
    <dbReference type="OMA" id="GHHEDYL"/>
    <dbReference type="OrthoDB" id="3763at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011081">
        <property type="entry name" value="Big_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043750">
        <property type="entry name" value="DUF5695"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07532">
        <property type="entry name" value="Big_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18951">
        <property type="entry name" value="DUF5695"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168824" description="Big_4 domain-containing protein" evidence="2">
        <location>
            <begin position="28"/>
            <end position="1341"/>
        </location>
    </feature>
    <feature type="domain" description="Big_4" evidence="3">
        <location>
            <begin position="1228"/>
            <end position="1284"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1305"/>
            <end position="1326"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1306"/>
            <end position="1326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1341" mass="147533" checksum="AB6E67B9235A9FAD" modified="2011-01-11" version="1">MKFKGILAAFLFLTTASVLFGTHTAEAHELSNDKLTIHTGEHGEISSIRIKGDAFPTEYVMNATVTPEQNTADHQWLGELMFTYRLDGGSWTKAWTNKSADARKITTSGNRVTVTYENSSNAEGIRNFKVIETYSAESNGSVLWNIQVQNTSGKKLEIGDFGLPLPFNEQWTYGDAIYETRVVTHSFVGNNSSYITAGRPSGIGSSLLLIPDSTTGAGFEYQDHWRDEEHPGSKWAWNPANEGKWLEGLNVFYIHSNVIKSTNRGYLPNTSLILNPGQSKNYGFKFLAVKDEHDVKDTLYQENLVDTTVVPGMIVPTNQKAKVDLRTKQTINKVTYPDGTVIPQTDSKAGGHQIYELKFTKLGPNFITVEYGNGNKTVLQFYAIEPIDQALQRHATFMVDKTQWNVPGDLRDKVFDDWMMHTKSKRNIFNGYWGWGDDWGLTHGQFLAEKNTLSPVAKEVRAVDDYLETAIWTNLMNGHHEDYLIHDFLMPEPNDTPTYRGYAYPHVYNTYFSMYKIAKEYPDLVTYKHPKETYLLRAYNIFKALYEGPVAYNWETGLMGELTTPDIIQALHDEGYDDEANDLKEKMDRKYNNFKNTKYPYGSEYSYDNTGEEAVYTLAKQNIDTEGEQSKALEMMGKINAKTRASRGHMPVWYYYTDPVTITGENWFNFQYTTSLAGYAMDDWIRHHEDNHREEQQRLSYAAKIANVGAINSGQISSDPEDIGAVAWTYQAEKGNNGTNGTGGGKNVPLFNGWRGMSGEADLGLFGALKTLSADIAIDPIFGLTGYGAEVSKSGNVYTIKPLDGLFKRVNLITEKLYIELEKDQYTEAKLATSKDYVWLQLKNQTPGQAHSTYVTFDGLKKGTYLVKVGGQSQGKFNAYAPTNKLKLEMGTASSYTVELTPTTPDPNKAPVVDAGKDSKVKLPDQIILKGTATDDGLPQGKVTSEWSLVEGPQNAKVTFSSKTSLRSKVNVSEPGTYIFKLTASDSQLSGEAKVTVIAEPAAPLPEQLAVYKFDETSGAVAADSSESGNDATVKGTAAWAAGKRGNAVSLNGKDSYVQLPAGIVSRAQQLTVSGWVKANSLSDYVRIFDFGSGTNEYMFLTPKAGNRMLFAITNQGNGQGQEQTIDAPVLPTGVWKHVAVTLSGSTGILYVDGKEVGRNTNLTLNPTSLGQTKNNFIGKSQYPDPYFNGLVDEFRIYSRALNANEVAGLASGTAQSLTATENITALKEVNVTTHVGEKPELPSVVEATYGEGSTKWVAVEWEDIDPAQYAAPGSFELKGKVEGTELKAMAKVTVIEAGAVASPVTPISPETSVTPPTTTSPVTSVLPSRLISPAKSVGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEC7</accession>
    <name>E3EEC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Nucleoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">iunH1</name>
        <name evidence="4" type="ORF">PPSC2_05220</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369683.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1067"/>
    <dbReference type="EnsemblBacteria" id="ADO55049">
        <property type="protein sequence ID" value="ADO55049"/>
        <property type="gene ID" value="PPSC2_05220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1058"/>
    <dbReference type="eggNOG" id="COG1957">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036838_11_0_9"/>
    <dbReference type="OMA" id="HFNGGNI"/>
    <dbReference type="OrthoDB" id="1763387at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016799">
        <property type="term" value="F:hydrolase activity, hydrolyzing N-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006139">
        <property type="term" value="P:nucleobase-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901564">
        <property type="term" value="P:organonitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.245.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001910">
        <property type="entry name" value="Inosine/uridine_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023186">
        <property type="entry name" value="IUNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036452">
        <property type="entry name" value="Ribo_hydro-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12304">
        <property type="entry name" value="PTHR12304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01156">
        <property type="entry name" value="IU_nuc_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53590">
        <property type="entry name" value="SSF53590"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IU_nuc_hydro" evidence="3">
        <location>
            <begin position="5"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="33657" checksum="9DD1D61011D86683" modified="2011-01-11" version="1">MSKKLILDVDTGIDDALAIAYAVHSPELELLGITTTFGNISVEEATRNSLILLEKLGVEAPVVSGAHKPYARELFKPYSRHIHGEDGIGNQLKGAPSRQAASGDAADFIIGQARRYEGKLTLVAVGPLTNLAIALDRCPELPQLLDRLIIMGGAVTVKGNVTPTAEANIYADPEAAAYVLEAGFPLTLVGLDVTMQTLLPQQEVDKWREQGTELGMFMADMTDFYMEAYRNFRPGIAGCALHDPLAVGLAIDSSFVETRPMHIAVEVGDSTEVGRTREVQNETGAQTLTTIDVALKVDAERFLRHFLSRVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEI7</accession>
    <name>E3EEI7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphoesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pgpB1</name>
        <name evidence="3" type="ORF">PPSC2_07015</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370069.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19995"/>
    <dbReference type="EnsemblBacteria" id="ADO55438">
        <property type="protein sequence ID" value="ADO55438"/>
        <property type="gene ID" value="PPSC2_07015"/>
    </dbReference>
    <dbReference type="GeneID" id="66573533"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1446"/>
    <dbReference type="eggNOG" id="COG0671">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072573_10_2_9"/>
    <dbReference type="OMA" id="VFWYVLM"/>
    <dbReference type="OrthoDB" id="1930882at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="2">
        <location>
            <begin position="62"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="19501" checksum="724633C533EE2BFC" modified="2011-01-11" version="1">MQRLVVKLVNLEQRLFKWINGRLHNRFLNFWLYYLTHLGGATFTIASTLLIWWLAPYPWKDSGMKGAIALAVSHIPVAIVKKLYPRIRPYLALPGTNTFRNPLSDHSFPSGHTTAIFSATVPFMLQSPMLALLLLPVAIIVGFSRIYLGLHYPTDVLAGAVIGTSAAIGTVAFWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEN7</accession>
    <name>E3EEN7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pstB3</name>
        <name evidence="6" type="ORF">PPSC2_08275</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370344.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20880"/>
    <dbReference type="EnsemblBacteria" id="ADO55724">
        <property type="protein sequence ID" value="ADO55724"/>
        <property type="gene ID" value="PPSC2_08275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1739"/>
    <dbReference type="eggNOG" id="COG1117">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="AFMYMGD"/>
    <dbReference type="OrthoDB" id="1416748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015415">
        <property type="term" value="F:ATPase-coupled phosphate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03260">
        <property type="entry name" value="ABC_PstB_phosphate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005670">
        <property type="entry name" value="Phosp_transpt1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43423">
        <property type="entry name" value="PTHR43423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00972">
        <property type="entry name" value="3a0107s01c2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="34"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="10"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="66"/>
            <end position="73"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="31204" checksum="45EF816D10A295F9" modified="2011-01-11" version="1">MEHVITRAAKTATPATSVQSTRSEQLAGQAPHPFSTEDLSIYYGSFEAVKKVNLAFPEQTVTALIGPSGCGKSTFLRSLNRMNDEIASSSTTGHIWMDGQDLTAPETDVIKLRQQIGMVWQRPNPFYKSIYNNIAFGPKYRGVRKKKQLDEIVESSLRKAALWDEVKDRLHDSALALSGGQQQRLCIARALSVQPKILLLDEPASALDPVSTGKVEELITELKKELRIVIVTHNMQQAARISDYTAYFYVGSLVEHGKTNDIFTNPENELTQEYIMGRFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEQ9</accession>
    <name>E3EEQ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sasP</name>
        <name evidence="4" type="ORF">PPSC2_08375</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the alpha/beta-type SASP family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309613.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20980"/>
    <dbReference type="EnsemblBacteria" id="ADO55746">
        <property type="protein sequence ID" value="ADO55746"/>
        <property type="gene ID" value="PPSC2_08375"/>
    </dbReference>
    <dbReference type="GeneID" id="66578237"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1760"/>
    <dbReference type="eggNOG" id="ENOG5032YCI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_169738_2_0_9"/>
    <dbReference type="OMA" id="MECASEV"/>
    <dbReference type="OrthoDB" id="2064087at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.10.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001448">
        <property type="entry name" value="SASP_alpha/beta-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018126">
        <property type="entry name" value="SASP_alpha/beta-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038300">
        <property type="entry name" value="SASP_sf_alpha/beta"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00269">
        <property type="entry name" value="SASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00304">
        <property type="entry name" value="SASP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0749">Sporulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="7987" checksum="74E56DF7CCAA7259" modified="2011-01-11" version="1">MAQGNNGNSNNLVVSRSSGALEQMKYEIAQELGISIPQDGYQGNMTSYENGSIGGYITKRLVTIAEQQLAGQYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEU8</accession>
    <name>E3EEU8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">3-oxoacyl-[acyl-carrier-protein] synthase 2</fullName>
            <ecNumber evidence="3 12">2.3.1.179</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">fusC</name>
        <name evidence="16" type="ORF">PPSC2_00405</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 12">
            <text>(9Z)-hexadecenoyl-[ACP] + H(+) + malonyl-[ACP] = 3-oxo-(11Z)-octadecenoyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:55040"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10800"/>
            <dbReference type="Rhea" id="RHEA-COMP:14074"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:83989"/>
            <dbReference type="ChEBI" id="CHEBI:138538"/>
            <dbReference type="EC" id="2.3.1.179"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>a fatty acyl-[ACP] + H(+) + malonyl-[ACP] = a 3-oxoacyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:22836"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9916"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78776"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 12">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 12 14">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.179" evidence="3 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368717.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EEU8"/>
    <dbReference type="STRING" id="1406.LK13_13420"/>
    <dbReference type="EnsemblBacteria" id="ADO54071">
        <property type="protein sequence ID" value="ADO54071"/>
        <property type="gene ID" value="PPSC2_00405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.81"/>
    <dbReference type="eggNOG" id="COG0304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_69_2_9"/>
    <dbReference type="OMA" id="RIYCEAA"/>
    <dbReference type="OrthoDB" id="606297at2"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00834">
        <property type="entry name" value="KAS_I_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017568">
        <property type="entry name" value="3-oxoacyl-ACP_synth-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018201">
        <property type="entry name" value="Ketoacyl_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="PTHR11712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000447">
        <property type="entry name" value="KAS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03150">
        <property type="entry name" value="fabF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00606">
        <property type="entry name" value="B_KETOACYL_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 12" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8 12" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5 12" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_KS" evidence="15">
        <location>
            <begin position="6"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="active site" evidence="13">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR000447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000447-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM00825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO54071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="414" mass="43636" checksum="85699D85C063F54E" modified="2011-01-11" version="1">MVRRRVVVTGQGVVTPVGLHLTDFWNSLLEGKSGIGPVTVFDTANIPTKIGAQVTGFDPLEYMSKKEAQKVAQFTQFALAAARQAVEQSKLVIDERNAGRVGVIVGSGAGGLDVIEENYRKLTELGPKRVSPYFVSSMMINSAPGEISIAIGAKGPSFAVVTACATGSNAIGEALRTIQYGTADVVVAGGAEANFSQLDLASFANIHALSRRNEEPQKASRPFDTDRDGFVIGGGAGVLVLEELEHALNRGATILAEVAGYGCTTDAYHITAPDPSGSGPAEAINIALQDGGLTPQEIDYVNAHGTSTPFNDRMEINAIQKVFGEHAPRLAISSIKSMTGHLMGGAGAVELIATVQSMIHSKVPPTLNCDNPEAPELNFVPHVYQEREVRAAISNSFGFGGHNVCLAVRKWEGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFJ5</accession>
    <name>E3EFJ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Fructokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ydhR</name>
        <name evidence="1" type="ORF">PPSC2_07225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370113.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20205"/>
    <dbReference type="EnsemblBacteria" id="ADO55486">
        <property type="protein sequence ID" value="ADO55486"/>
        <property type="gene ID" value="PPSC2_07225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1492"/>
    <dbReference type="eggNOG" id="COG1940">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036604_3_0_9"/>
    <dbReference type="OMA" id="AWQNFNF"/>
    <dbReference type="OrthoDB" id="1130699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01125">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="304" mass="32528" checksum="74861E80566004D2" modified="2011-01-11" version="1">MKRDHGEGITTAMTVLGAIEAGGTKFVCGIGNERGEVLERASFPTTTPAETMENVIAFFEGKGIEALGVGSFGPIDPIEGSDTYGYITTTPKPHWGNYNLIGKLKEHFDVPMGFDTDVNGAALGESIWGAAKGLDNCLYITIGTGIGAGALVGGKLVHGLSHPEMGHILVRRHPEDNYEGTCPYHGDCLEGLAAGPALEKRWKVKGHELSVDHPAWEMEAHYLAQALMSYILILSPQKIIMGGGVMKQDQLFPLIRTKLQQLLNGYVQHSSLTTEIEQYIVSPGLGDNAGLCGALALAKEKLNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFK2</accession>
    <name>E3EFK2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cyclic dehypoxanthine futalosine synthase</fullName>
            <shortName evidence="6">Cyclic DHFL synthase</shortName>
            <ecNumber evidence="6">1.21.98.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Dehypoxanthine futalosine cyclase</fullName>
            <shortName evidence="6">DHFL cyclase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Menaquinone biosynthetic enzyme MqnC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mqnC</name>
        <name evidence="8" type="synonym">foS2</name>
        <name evidence="8" type="ORF">PPSC2_07260</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>dehypoxanthine futalosine + S-adenosyl-L-methionine = 5'-deoxyadenosine + cyclic dehypoxanthinylfutalosinate + H(+) + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:33083"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58864"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64270"/>
            <dbReference type="EC" id="1.21.98.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Quinol/quinone metabolism; menaquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the radical SAM superfamily. MqnC family.</text>
    </comment>
    <dbReference type="EC" id="1.21.98.1" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370120.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20235"/>
    <dbReference type="EnsemblBacteria" id="ADO55493">
        <property type="protein sequence ID" value="ADO55493"/>
        <property type="gene ID" value="PPSC2_07260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1499"/>
    <dbReference type="eggNOG" id="COG1060">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040406_1_0_9"/>
    <dbReference type="OMA" id="ATMMFGS"/>
    <dbReference type="OrthoDB" id="419725at2"/>
    <dbReference type="UniPathway" id="UPA00079"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046992">
        <property type="term" value="F:oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009234">
        <property type="term" value="P:menaquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00992">
        <property type="entry name" value="MqnC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045567">
        <property type="entry name" value="CofH/MnqC-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022431">
        <property type="entry name" value="Cyclic_DHFL_synthase_mqnC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034405">
        <property type="entry name" value="F420"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020050">
        <property type="entry name" value="FO_synthase_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43076">
        <property type="entry name" value="PTHR43076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19288">
        <property type="entry name" value="CofH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00343">
        <property type="entry name" value="aminofutalosine_synthase_(mqnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03699">
        <property type="entry name" value="menaquin_MqnC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00423">
        <property type="entry name" value="TIGR00423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0474">Menaquinone biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="51"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="377" mass="42954" checksum="82F0EAE179238020" modified="2011-01-11" version="1">MSVIDHILDKALRGERLNLEDTVALFESDEVEKIGHAANKVMNRMHPDPIKTFVIGRNINYTNVCDVYCRFCAFYRRPGSDEGYVLPDEVIFQKIKETQEVGGTEILMQGGVNPNLPFSYYTDLLKAIKERFPDITMHSFSPAEIHKMKEKSGLSMEETIRAIHEAGLDSLPGGGGEILDDRTRRKISRLKGSWRDWMDVMQTAHKVGMNTTATMVIGFGELMEERALHLLRVRDAQDECIENKYNSEGFLAFIPWTFQPDNTNLKKERQTPEEYLKTVAISRLVLDNIKHIQSSWVTMGPEIGKKSLYYGCDDFGSTMIEENVVSAAGATYKVNIESILQLIRETGHIPAQRNTRYDIIRTFDSASSIEHDFIMQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFX8</accession>
    <name>E3EFX8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphopantetheine adenylyltransferase</fullName>
            <ecNumber evidence="6">2.7.7.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Dephospho-CoA pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Pantetheine-phosphate adenylyltransferase</fullName>
            <shortName evidence="6">PPAT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">coaD</name>
        <name evidence="8" type="ORF">PPSC2_09625</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>(R)-4'-phosphopantetheine + ATP + H(+) = 3'-dephospho-CoA + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:19801"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57328"/>
            <dbReference type="ChEBI" id="CHEBI:61723"/>
            <dbReference type="EC" id="2.7.7.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 4/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the bacterial CoaD family.</text>
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        <property type="gene ID" value="PPSC2_09625"/>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.2029"/>
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        <property type="reaction ID" value="UER00355"/>
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        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="F:pantetheine-phosphate adenylyltransferase activity"/>
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        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="term" value="P:coenzyme A biosynthetic process"/>
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        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="entry name" value="PPAT"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="PPAT_bact"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001980">
        <property type="entry name" value="PPAT"/>
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    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
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        <property type="entry name" value="PTHR21342:SF1"/>
        <property type="match status" value="1"/>
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    <dbReference type="Pfam" id="PF01467">
        <property type="entry name" value="CTP_transf_like"/>
        <property type="match status" value="1"/>
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    <dbReference type="PRINTS" id="PR01020">
        <property type="entry name" value="LPSBIOSNTHSS"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01510">
        <property type="entry name" value="coaD_prev_kdtB"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="cyt_tran_rel"/>
        <property type="match status" value="1"/>
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    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
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    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 6 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CTP_transf_like" evidence="7">
        <location>
            <begin position="10"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="14"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="22"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
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    <feature type="binding site" evidence="6">
        <location>
            <position position="78"/>
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        <ligand>
            <name>substrate</name>
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        <location>
            <position position="92"/>
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        <ligand>
            <name>substrate</name>
        </ligand>
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    <feature type="binding site" evidence="6">
        <location>
            <begin position="93"/>
            <end position="95"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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    <feature type="binding site" evidence="6">
        <location>
            <begin position="128"/>
            <end position="134"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="6">
        <location>
            <position position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022993"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00029346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="19456" checksum="AD6091E714BEBFEE" modified="2011-01-11" version="1">MIEHKPRVAVYPGTFDPVTMGHQDIIQRAARQFDLLIVAVLNNISKNPLFSLEERMELLRTVTRDIPNVEVDSFRDLTANYVRQKGAQVIVRGIRSVTDFEYELQLASTNHKLNPDAETIFMMTNPAYSYLSSSMVKEIAHFDGKVVDLVSPEVEDALRAKVSANRGGSTMKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGA8</accession>
    <name>E3EGA8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">50S ribosomal protein L31</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rpmE</name>
        <name evidence="8" type="synonym">rpmE1</name>
        <name evidence="8" type="ORF">PPSC2_00715</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Binds the 23S rRNA.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="EnsemblBacteria" id="ADO54136">
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        <property type="gene ID" value="PPSC2_00715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.144"/>
    <dbReference type="eggNOG" id="COG0254">
        <property type="taxonomic scope" value="Bacteria"/>
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    <dbReference type="HOGENOM" id="CLU_114306_4_3_9"/>
    <dbReference type="OMA" id="WYPDAKV"/>
    <dbReference type="OrthoDB" id="2014569at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
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        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="F:structural constituent of ribosome"/>
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        <property type="project" value="InterPro"/>
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        <property type="term" value="P:translation"/>
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        <property type="project" value="UniProtKB-UniRule"/>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00501">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="L28p-like"/>
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    </dbReference>
    <dbReference type="InterPro" id="IPR027491">
        <property type="entry name" value="Ribosomal_L31_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042105">
        <property type="entry name" value="Ribosomal_L31_sf"/>
    </dbReference>
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        <property type="entry name" value="PTHR33280"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01197">
        <property type="entry name" value="Ribosomal_L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01249">
        <property type="entry name" value="RIBOSOMALL31"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143800">
        <property type="entry name" value="SSF143800"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01143">
        <property type="entry name" value="RIBOSOMAL_L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="7">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="7248" checksum="E90904EB53E70D0F" modified="2011-01-11" version="1">MQQAIQPKYNVTNVTCACGNTFETGSVKESLRVEICSACHPFFTGKQKFIDAGGRVDRFKKKYGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGX4</accession>
    <name>E3EGX4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rfaG3</name>
        <name evidence="3" type="ORF">PPSC2_05930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55208.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599539.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18895"/>
    <dbReference type="EnsemblBacteria" id="ADO55208">
        <property type="protein sequence ID" value="ADO55208"/>
        <property type="gene ID" value="PPSC2_05930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1214"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009583_35_0_9"/>
    <dbReference type="OrthoDB" id="694191at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="72"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="224"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55208.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="413" mass="46695" checksum="3AD00A1A4289B275" modified="2015-05-27" version="2">MSQQVSRRMTPPVSKVLIIHNFYQQSGGEDKVVEQESAMLRSRGIETEHYYVHNDSIQSKGLANMAKLAVEATWSFPEFKRIKGLLLRVKPDVVHVHNFFPVISPSVYHACERLGIPVVQTLHNYRLICPAATFMRGNEVCEKCLHGTLLHSIRHGCYRGSQLQTIPVAAMIKFNELIGTWQHKVSRYIALTEFARDKFAESGIPLDRIAVKPNFVHHQTVKAKYDPNDRYLLFVGRISAEKGVRNLLQAWSQLEDRGGLRLVIIGEGPEKAELAAAHQQEDIRFLGKQDGDTVLDCMSRAMYVMVPSIWYEGFPMTIVESYSVGTPVLCSRIGALEEVVEDGVTGFHFQHDDLENIKTVIRRAVAYENYAAMRQKVAENYAAHYTEEVNVKQLLAIYSEAMEECDDEAAAPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH51</accession>
    <name>E3EH51_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA recombinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pinR1</name>
        <name evidence="7" type="ORF">PPSC2_07775</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370238.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1634"/>
    <dbReference type="EnsemblBacteria" id="ADO55611">
        <property type="protein sequence ID" value="ADO55611"/>
        <property type="gene ID" value="PPSC2_07775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1617"/>
    <dbReference type="eggNOG" id="COG1961">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010686_5_1_9"/>
    <dbReference type="OMA" id="QRQMEGI"/>
    <dbReference type="OrthoDB" id="1791095at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006118">
        <property type="entry name" value="Recombinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00397">
        <property type="entry name" value="RECOMBINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="6">
        <location>
            <begin position="5"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-serine intermediate" evidence="4 5">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR606118-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="205" mass="24012" checksum="21485615921B36D8" modified="2011-01-11" version="1">MSEIRHYGYIRVSTKDQNEARQLEAMQDLGIMERDYFIDKKSGKNFDRPQYQALKSVLRKGDILFIKDLDRLGRNAEEIKRKWQDITHEIGAHIVILDMPILDTRQYHNGLEKVISSIVLELLSYMAEREREKINGRQSEGIAAAKNNGVVFGRPKQAISDDFIMVYEEWKQGGITAVEAMRRIEMKPNTFYRRVKEYEQQQQVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC4</accession>
    <name>E3EHC4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATP-dependent helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yqhH</name>
        <name evidence="4" type="ORF">PPSC2_09170</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370532.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21640"/>
    <dbReference type="EnsemblBacteria" id="ADO55915">
        <property type="protein sequence ID" value="ADO55915"/>
        <property type="gene ID" value="PPSC2_09170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1933"/>
    <dbReference type="eggNOG" id="COG0553">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006041_1_0_9"/>
    <dbReference type="OMA" id="YVWEQCD"/>
    <dbReference type="OrthoDB" id="291634at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140658">
        <property type="term" value="F:ATP-dependent chromatin remodeler activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="86"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="378"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="574"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="574"/>
            <end position="589"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="630" mass="71314" checksum="5F64489ED01636F9" modified="2011-01-11" version="1">MKAKPTSSQHTQNQAPLPVPVQFDRSWQDELDQRLHKGGPWGDWDLYQLAIEAEKAKLVPSFDELQCLQHLQDLTPLPHQLDTARKVLFEMSGRAILADEVGLGKTIEAGMILKEYLVRGLASKVLILVPASLVLQWVRELNSKFGIPAVAQKKAYSWSSEVVVASMDTAKREPHSNILLDTDYDLLIIDEAHKLKNKKTSNYQFIMKLRKKYCLLLTATPVQNDLSELFNLITLLKPGQLGRQGDFSANFVVDKRLPKNEDQLKDELSKVMIRNRRGEGPVQFTKRNVSNIHLELSPEEQALYDGVTSFVKEQYQANGGNLSSMLSLVTLQREVCSSRDAVFVTLVNLSKKMAPDSPLRDRVWDLVAHIKAIKANSKAEKALELIRKMNEKVIIFTEYRATQEYLLNYFRDRGLSAVPYRGGMNRGRKDWMMDLFRGRIQVMIATEAGGEGINLQFCHHMINFDLPWNPMRVEQRIGRVHRLGQKHDVNIFNLSTTGTIEEHILHLLHEKINMFEMVIGGLDVILEKFEKKESIEKSLYKIMLESSSDDEIRRKMQKLGHSLDSIKQEIEQIRTNPSVTPNVATDKSAGTKQPKGRLTGVSSSVTEDLLGLAGDAASPTKARRSVKGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHU0</accession>
    <name>E3EHU0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Zinc ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">psaA3</name>
        <name evidence="6" type="ORF">PPSC2_11180</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial solute-binding protein 9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56352.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905731.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23575"/>
    <dbReference type="EnsemblBacteria" id="ADO56352">
        <property type="protein sequence ID" value="ADO56352"/>
        <property type="gene ID" value="PPSC2_11180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2367"/>
    <dbReference type="eggNOG" id="COG0803">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016838_1_0_9"/>
    <dbReference type="OrthoDB" id="1703187at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030001">
        <property type="term" value="P:metal ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006129">
        <property type="entry name" value="AdhesinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006128">
        <property type="entry name" value="Lipoprotein_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006127">
        <property type="entry name" value="ZnuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01297">
        <property type="entry name" value="ZnuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00691">
        <property type="entry name" value="ADHESINB"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00690">
        <property type="entry name" value="ADHESNFAMILY"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0732">Signal</keyword>
    <keyword evidence="1 3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005673392" evidence="5">
        <location>
            <begin position="30"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56352.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="332" mass="36100" checksum="B4D910D3289309E5" modified="2015-05-27" version="2">MNTWFKKSFVLSAGLALILAGCGAKSDNAATNASQTEPNTAQTADSGKKLNVVTTFYPMYEFTKQVAGDHANVAALIPAGAEPHDWEPSAKDMAQVKDADVFVYNGIVEGWAEQALSSASNDKRVVVEASKGLNLMEGSAEEEEGEEAHAEEGHDHDHVLDPHVWLDPVLAQKEVEAIEAGLVKADPANKADYEKNADAYIAKLKELDNEFKTGLKDVKRKDFITQHAAFSYLAKQYGLTQVPIAGLSPEQEPTPDKLAGIIKFAKENNVKTIFFETLVDPKVAETVATEIGSKTDVLNPLEGLTDEDKQKNLDYLGVMKNNLEALKKALNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHV3</accession>
    <name>E3EHV3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Imm63 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371050.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2473"/>
    <dbReference type="EnsemblBacteria" id="ADO56445">
        <property type="protein sequence ID" value="ADO56445"/>
        <property type="gene ID" value="PPSC2_11625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2458"/>
    <dbReference type="eggNOG" id="ENOG50305YG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1649705_0_0_9"/>
    <dbReference type="OMA" id="WHEANRR"/>
    <dbReference type="OrthoDB" id="1476741at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028952">
        <property type="entry name" value="Imm63"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023351">
        <property type="entry name" value="YppE-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15599">
        <property type="entry name" value="Imm63"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140415">
        <property type="entry name" value="SSF140415"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Imm63" evidence="1">
        <location>
            <begin position="52"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF15599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="18132" checksum="E1B1201C3E635C6C" modified="2011-01-11" version="1">MKKIYREQEIIDMTIKLLEQTSMYEEQYEQYVRRPFRTDFYDDLSPYVKVGKQGYTLQMYERGVQMLNKLTQDVEDVMYWIIEDTIHIIAHLNLLRKYKVDNQNTHLKYTKEIMKELTTAMNNAFYEIGGIYQEWHEANRRATLENPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHX5</accession>
    <name>E3EHX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acyl-CoA thioesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_11725</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the C/M/P thioester hydrolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371072.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2496"/>
    <dbReference type="EnsemblBacteria" id="ADO56467">
        <property type="protein sequence ID" value="ADO56467"/>
        <property type="gene ID" value="PPSC2_11725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2481"/>
    <dbReference type="eggNOG" id="COG1073">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029849_3_0_9"/>
    <dbReference type="OMA" id="IVFPYVP"/>
    <dbReference type="OrthoDB" id="1121855at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016790">
        <property type="term" value="F:thiolester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006637">
        <property type="term" value="P:acyl-CoA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016662">
        <property type="entry name" value="Acyl-CoA_thioEstase_long-chain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014940">
        <property type="entry name" value="BAAT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006862">
        <property type="entry name" value="Thio_Ohase/aa_AcTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042490">
        <property type="entry name" value="Thio_Ohase/BAAT_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08840">
        <property type="entry name" value="BAAT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04775">
        <property type="entry name" value="Bile_Hydr_Trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016521">
        <property type="entry name" value="Acyl-CoA_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bile_Hydr_Trans" evidence="3">
        <location>
            <begin position="13"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="BAAT_C" evidence="4">
        <location>
            <begin position="198"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="2">
        <location>
            <position position="227"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="2">
        <location>
            <position position="340"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="2">
        <location>
            <position position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR016521-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="424" mass="47815" checksum="E118B87DA83CE37F" modified="2011-01-11" version="1">MKLQVQPRIAIIDEKIDFCVTGLPPEDKMKITASMHFPWAVSEKYQSFAWFTADSNGSVDLSKHKPDSGTYDYIDSMGLIASLQKINSEGGNIAHNISIDGSLFIDIVCENGQDRECIRLERMFKLPEVKRHQITDEFVGELFYTENSNYKTIVVLGGSDGERSGLSLLSGPLASRGFNVLTVGYFNEKGLPKKLEEIPLEYFEKVFSWLKRNPLTCTNEIYVHGTSKGGELALLLASRYNFIAKVVASAPHAYCFQALDGLMSGKNVSSWSYEGRSLPFIPVDNDIFYEHHRHCIEKNIPFGFITTYKKSVERARNKEEARIKIENANANLLLISGQQDNIWNTHDACVEIMSILKKNNYKYKYNLLDYKDLGHSLPIPFIIPLSETLNLKMGGGVFTCGGTLKGNSFGQSDSWQKTIEFFMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIB8</accession>
    <name>E3EIB8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369863.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1251"/>
    <dbReference type="EnsemblBacteria" id="ADO55231">
        <property type="protein sequence ID" value="ADO55231"/>
        <property type="gene ID" value="PPSC2_06035"/>
    </dbReference>
    <dbReference type="GeneID" id="66573733"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1237"/>
    <dbReference type="eggNOG" id="ENOG503061V">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2602746_0_0_9"/>
    <dbReference type="OMA" id="PEFALSH"/>
    <dbReference type="OrthoDB" id="1926445at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="8538" checksum="E39566BE43A7A653" modified="2011-01-11" version="1">MPRKPYPQQISHRVGQSHIAFRGPAGGEQDALPPEFALSHGTPPPFPVAVAHVDMEAVVSTSPSHSFPSLDVERIIDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIT6</accession>
    <name>E3EIT6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370572.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21830"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55955">
        <property type="protein sequence ID" value="ADO55955"/>
        <property type="gene ID" value="PPSC2_09360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1972"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009583_2_0_9"/>
    <dbReference type="OMA" id="ERVDLWQ"/>
    <dbReference type="OrthoDB" id="948440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="15"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="189"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="389" mass="43874" checksum="70C106894620C70E" modified="2011-01-11" version="1">MLRVALFTDTYTPDVNGAALTLERWIGYLETHGVSTLVFAPEADHHLSSGPGVERFRSIPFLLYRECRLAIPNAKQINERLSAFSPHLIHVATPFNLGLYGTSYAAKHHIPLVASYHTHFDKYLEYYKLRWLEPALWKYMLWFHRHCERVYVPSRSTMELLRNKGMGQLEIWGRGIDTDRFQPTVNREAIWEKWGVRADAFVILYVGRLAPEKGIDTLLDSYLQLPDDVRAASVLVIAGDGPLFKFKTAADIGMPEHAVHWLGFVKGPELAELYAAADVFLFPSTTETFGNVVLEAMASGTPVIGANEGGVKDNVIHRKTGLLCPAGDAAAFAKAVHLLYEDVPLRDFLSRTGRAYSLEQTWDRIFERLLDSYMDAATLHLDSRPVTRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIY7</accession>
    <name>E3EIY7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ydaO2</name>
        <name evidence="4" type="ORF">PPSC2_09605</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the acyltransferase 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370623.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2034"/>
    <dbReference type="EnsemblBacteria" id="ADO56006">
        <property type="protein sequence ID" value="ADO56006"/>
        <property type="gene ID" value="PPSC2_09605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2024"/>
    <dbReference type="eggNOG" id="COG1835">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005679_2_2_9"/>
    <dbReference type="OMA" id="SIYLCHF"/>
    <dbReference type="OrthoDB" id="1979131at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="88"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="138"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="172"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="206"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="237"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="260"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="288"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="314"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="3">
        <location>
            <begin position="15"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="357" mass="40620" checksum="BA4E9C1788FB9B15" modified="2011-01-11" version="1">MPEDKGKMEQDKLQFVDTLRALAIMGVLLVHVSQHVDGLNGWLQKGLSIGAKGVALFYMASAFTLFLSLSRRSSDKREGLAAYLLRRFFRIAPLYYVMLGIYLAVNGTGPRFWLGDQEGVTATNIAAHVLFLNGLNPYWINGIIGVEWSIAVECMFYLFIPLLFKLIRSVRHATWFVMMVLVASFGLNTVFAQYPLISDHSLWGHYLYLWFPNQLPVFGLGILLFFIWKDERHWKSVDALSGGLLLGTVLFAFFGGMADYLLGVGLLLGAYALYHWQPMWLLNQVWSWIGRLSYSMYLTHMLVLGLIIQIKLPFAPLVSLTLMFIMTLLITAGLSWFTYIWIEQPGIRLGKKLISRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ49</accession>
    <name>E3EJ49_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitroreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370836.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23020"/>
    <dbReference type="EnsemblBacteria" id="ADO56230">
        <property type="protein sequence ID" value="ADO56230"/>
        <property type="gene ID" value="PPSC2_10625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2245"/>
    <dbReference type="eggNOG" id="COG3560">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073125_1_0_9"/>
    <dbReference type="OMA" id="YDIPANW"/>
    <dbReference type="OrthoDB" id="1847197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016657">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034599">
        <property type="term" value="P:cellular response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02140">
        <property type="entry name" value="Frm2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033877">
        <property type="entry name" value="Frm2/Hbn1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43035">
        <property type="entry name" value="PTHR43035"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="10"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="200" mass="23170" checksum="FAC454123AA356F7" modified="2011-01-11" version="1">MTKDFFTALKDRRSYYGISKEQVISDQRIQEIVEEAVKYTPTSFNSQTSRAVVLLGEHHDKLWNITENILREVVGNEEQFKSTAEKMNGFRSGYGTVLFFEDNNVIAGLQQQFEAYADNFPIWANQSNGMLQLVVWTALEQEGLGASLQHYNPLIDEKVKNEWDIPEHWKLIAEMPFGKPTFQPGDKEFQPIEERVKTFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJD7</accession>
    <name>E3EJD7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">flaR</name>
        <name evidence="2" type="ORF">PPSC2_11535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371029.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23900"/>
    <dbReference type="EnsemblBacteria" id="ADO56424">
        <property type="protein sequence ID" value="ADO56424"/>
        <property type="gene ID" value="PPSC2_11535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2439"/>
    <dbReference type="eggNOG" id="COG0563">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092618_0_3_9"/>
    <dbReference type="OMA" id="RIRPKIW"/>
    <dbReference type="OrthoDB" id="1286005at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="26910" checksum="F3E5CC91DAD2AF5E" modified="2011-01-11" version="1">MDSVKYAIVFLPLFLLYLLLKGGALAVGLLYRLIYSISTLRAGQSDDLLAVQHAKRIIVIGSPGSGKTFLAKRLSMWIHLPYTSLDDLYWGPEWKRSTDKQFHKQLGEVLQREEWIIEGNYHECYFTERLQRSDTIIVMDVSTIEAISGVITRSLNRFLFSKELPTGIEREAVRIWDISPRFVRFVLGFRRRIRPKIWPLILQYGNERNLIILKSKYCSCPWMSPDRQLSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJH5</accession>
    <name>E3EJH5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Alpha-galactosidase</fullName>
            <ecNumber evidence="3 6">3.2.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">melA9</name>
        <name evidence="11" type="ORF">PPSC2_12010</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids.</text>
            <dbReference type="EC" id="3.2.1.22"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 36 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.22" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371129.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24335"/>
    <dbReference type="CAZy" id="GH36">
        <property type="family name" value="Glycoside Hydrolase Family 36"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56525">
        <property type="protein sequence ID" value="ADO56525"/>
        <property type="gene ID" value="PPSC2_12010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2541"/>
    <dbReference type="eggNOG" id="COG3345">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009640_2_1_9"/>
    <dbReference type="OMA" id="ISPFEEN"/>
    <dbReference type="OrthoDB" id="131906at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052692">
        <property type="term" value="F:raffinose alpha-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016052">
        <property type="term" value="P:carbohydrate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14791">
        <property type="entry name" value="GH36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038417">
        <property type="entry name" value="Alpga-gal_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000111">
        <property type="entry name" value="Glyco_hydro_27/36_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002252">
        <property type="entry name" value="Glyco_hydro_36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031705">
        <property type="entry name" value="Glyco_hydro_36_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031704">
        <property type="entry name" value="Glyco_hydro_36_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16874">
        <property type="entry name" value="Glyco_hydro_36C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16875">
        <property type="entry name" value="Glyco_hydro_36N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005536">
        <property type="entry name" value="Agal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00743">
        <property type="entry name" value="GLHYDRLASE36"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00512">
        <property type="entry name" value="ALPHA_GALACTOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_36N" evidence="10">
        <location>
            <begin position="28"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_36C" evidence="9">
        <location>
            <begin position="651"/>
            <end position="752"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="367"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="477"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="479"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="549"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="200"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="444"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="527"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="549"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR005536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR005536-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR005536-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF16875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="757" mass="85230" checksum="3B881BCB6B31205D" modified="2011-01-11" version="1">MNIHVNEALGLFHLQSKDCSYIIQLVEGYPAHVYWGAQLHHDQSLASILELRERCSFSPTPDSSSRTLSLDTLPQEYPQYGTSDFRQPAYQVALADGTRTTELKYSGYRIEPGKPKLEGLPSVYTESDDEATTLLLFLEDQHSGLKTTLLYTVFANHSAIARSTLFEHKGSAVMNIEHAMSASVDFADSNYQALYLSGAWVRERHIQRRDLGPGAIRLESRRGSSSHQMNPFLALLRPDATEDRGDVYGFSLIYSSNFVAQAEVEQFNQTRVSIGINPFDFSWRLEPGQSFQTPEAVLVFSEEGLGGMSRTYHRLYRTRLCRGTYRDKERPILVNNWEATYFDFDADKIEAIAKEAGPLGIELFVLDDGWFGKRDNDNSSLGDWFEDRRKLPGGLTDLAKRVNEQGLQFGLWVEPEMVSPDSELYRTHPDWCLHAEGRRRTEGRSQLVLDLSRKEVCDYLYETLSSVFSIAPITYVKWDMNRNMTEIASATATSERQKEIAHRYMLGLYDLLERLTSRFPDILFESCSGGGGRFDPGMLYYMPQTWTSDDTDAIERLAIQYGTSIVYPASTMGAHVSNVPNHQVGRNTSLAIRGDVAMSGNFGYELDLTAFTNEEKELAARQIAQYKEIRSLVQQGDMYRLLSPFEGRGDTAWMFVSEDQSEAFVAYFRVLAEPNGPIRRLTLKGLDPAKKYIIETGATGNTSDPINTSTEDGVSPFRLAFDGEIFGGDRLMKIGLVVSDLTGDFASSTFRLKAISC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJR3</accession>
    <name>E3EJR3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386075.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0270"/>
    <dbReference type="EnsemblBacteria" id="ADO59661">
        <property type="protein sequence ID" value="ADO59661"/>
        <property type="gene ID" value="PPSC2_26815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5668"/>
    <dbReference type="HOGENOM" id="CLU_1633763_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18899" checksum="00C172845B85B667" modified="2011-01-11" version="1">MKMELLETLARCRVVDSSEMTIPSEVIEELREEKLVLQKEFGEEPSRKTLYMLTDKGEVYIKQNMPEIREIYRGFIVEQDLALCDFYLRRSVDERKSWITKDDLIKKYRLPGTVDGAFMNREGKLVGVKVLNQTASYAAVEKVEGFLKAAQIEFVHYIMFSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJS9</accession>
    <name>E3EJS9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59677.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886197.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0286"/>
    <dbReference type="EnsemblBacteria" id="ADO59677">
        <property type="protein sequence ID" value="ADO59677"/>
        <property type="gene ID" value="PPSC2_26725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5649"/>
    <dbReference type="HOGENOM" id="CLU_2937334_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59677.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="7005" checksum="49AFB7CFB76A921C" modified="2015-05-27" version="2">MKRLQGAEYHTQKDNLIPIAYSTTKAGNICLYYKGGFKHYLNDHEKLTFRTDGLKELNKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJU5</accession>
    <name>E3EJU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386107.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59693">
        <property type="protein sequence ID" value="ADO59693"/>
        <property type="gene ID" value="PPSC2_26665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5632"/>
    <dbReference type="HOGENOM" id="CLU_2899966_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="6883" checksum="4007027636D9E63D" modified="2011-01-11" version="1">MTKQVVVEENIFNKGFKQAIQLAVQSENVQEGEPFAILQNVAIIGVVENGEILIQKMLKDVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK05</accession>
    <name>E3EK05_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386128.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0323"/>
    <dbReference type="EnsemblBacteria" id="ADO59714">
        <property type="protein sequence ID" value="ADO59714"/>
        <property type="gene ID" value="PPSC2_26590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5610"/>
    <dbReference type="HOGENOM" id="CLU_2524439_0_0_9"/>
    <dbReference type="OrthoDB" id="2227725at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9569" checksum="7C93A03393BD0865" modified="2011-01-11" version="1">MSRNFPSIIAGPVKKRNACVIGKTITSAVLGYADRDDEVYLICKLNNEDRFHFEIPMGFDPEDLELDSFAHKLITEDEFNAFID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK49</accession>
    <name>E3EK49_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59758.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886211.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59758">
        <property type="protein sequence ID" value="ADO59758"/>
        <property type="gene ID" value="PPSC2_26370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5558"/>
    <dbReference type="HOGENOM" id="CLU_1538576_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59758.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="174" mass="19810" checksum="3BA22537B9DC7DC0" modified="2015-05-27" version="2">MTIQFNVYLYLGEPARVDKLIQRGLPGLYFRRGTSLIGMDTGVITEEERHRIVQEYKLRDFEVDQERFHALLKHLETTGGSLTDIELAFPERLGKDLGKSDKPLHSQSAFMVSSILKRGWNNECDVKSIEYVKDGIFIRCTALAELQITSTNNLNIEEVMNSFPIGILSSVIRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKB2</accession>
    <name>E3EKB2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385853.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59439">
        <property type="protein sequence ID" value="ADO59439"/>
        <property type="gene ID" value="PPSC2_27865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5905"/>
    <dbReference type="HOGENOM" id="CLU_2155877_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="111" mass="13159" checksum="4707B15AA4889984" modified="2011-01-11" version="1">MNNQRIVIVSPSYGIFEPNRAYERLLKKEGLSSWDCIEARTNERMIEFIKKQFARNKSTLDVAFLGKEKNQYLALKEVDISRPWRISKENESESIVYLDYPLSNVELNYYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKE0</accession>
    <name>E3EKE0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385881.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0073"/>
    <dbReference type="EnsemblBacteria" id="ADO59467">
        <property type="protein sequence ID" value="ADO59467"/>
        <property type="gene ID" value="PPSC2_27730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5876"/>
    <dbReference type="HOGENOM" id="CLU_2918390_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="6822" checksum="579D6B46A2AF71A7" modified="2011-01-11" version="1">MTKVIRKLKNRAGYVSVETVIVAGLIIALGAYAISQFYTTSQATTEWSIQNINKIYDVKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKN7</accession>
    <name>E3EKN7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_27640</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="14 15">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
            <plasmid evidence="14 15">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the transposase 35 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the transposase 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385902.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0094"/>
    <dbReference type="EnsemblBacteria" id="ADO59488">
        <property type="protein sequence ID" value="ADO59488"/>
        <property type="gene ID" value="PPSC2_27640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5855"/>
    <dbReference type="eggNOG" id="COG0675">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032903_0_0_9"/>
    <dbReference type="OMA" id="CRALTGW"/>
    <dbReference type="OrthoDB" id="222391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001959">
        <property type="entry name" value="Transposase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010095">
        <property type="entry name" value="Transposase_IS605_OrfB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021027">
        <property type="entry name" value="Transposase_put_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12323">
        <property type="entry name" value="HTH_OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01385">
        <property type="entry name" value="OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07282">
        <property type="entry name" value="OrfB_Zn_ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01766">
        <property type="entry name" value="tspaseT_teng_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-0614">Plasmid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="HTH_OrfB_IS605" evidence="13">
        <location>
            <begin position="14"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_IS605" evidence="11">
        <location>
            <begin position="175"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_Zn_ribbon" evidence="12">
        <location>
            <begin position="299"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF12323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO59488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="372" mass="42686" checksum="92C372763842EB02" modified="2011-01-11" version="1">MQHGQDFSSKNLRHKAYKYRIYPNRMQQQLIHQMFGCCRFVFNHFLAMWNNSYAATGKGLSYNTCATQLPALKQQCDWLKKVDSIALQSAVRHVADSFARYFKKQTQAPRFKNRKHPVQSYTTRYTHGNIAVNGSKLKLPKLGWLRFANSRQCEGRILSATVRRNAAGNYFVSLVCEVEVAPLLVNDKSIGIDLGLKTFAVTSDGMRVSHPKALSQYEKKLACWQRRLARRTKDGSNWQKAKQKVALIHERIANIRHDFLHKLSTKLIHENQTISIEHLRVANMLKNHKLAKSIADASWSEFSRQLTYKAEWYGRTLKMADTFAPTSQACHVCGEINPEVKNLSVRQWVCPSCKTLHDRDVNAAHNIKDVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKP4</accession>
    <name>E3EKP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0101"/>
    <dbReference type="EnsemblBacteria" id="ADO59495">
        <property type="protein sequence ID" value="ADO59495"/>
        <property type="gene ID" value="PPSC2_27605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5848"/>
    <dbReference type="HOGENOM" id="CLU_2524440_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9662" checksum="A6A4239C8A801AE0" modified="2011-01-11" version="1">MEANSLKGVKSVINAESIIEKLSDEQLKQAYEEIKAWRDSGMLENGIIRDVQNELQSANGSNVNIFTLSEPFLWEICKRRYEEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL52</accession>
    <name>E3EL52_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386028.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0221"/>
    <dbReference type="EnsemblBacteria" id="ADO59614">
        <property type="protein sequence ID" value="ADO59614"/>
        <property type="gene ID" value="PPSC2_27075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5725"/>
    <dbReference type="eggNOG" id="COG1397">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024566_8_1_9"/>
    <dbReference type="OMA" id="AGNGACM"/>
    <dbReference type="OrthoDB" id="1661477at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.4080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005502">
        <property type="entry name" value="Ribosyl_crysJ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036705">
        <property type="entry name" value="Ribosyl_crysJ1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03747">
        <property type="entry name" value="ADP_ribosyl_GH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101478">
        <property type="entry name" value="SSF101478"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="33098" checksum="4C931DF6929448C7" modified="2011-01-11" version="1">MDLEQSIKGAIYGIQIGDALGAAVECLSKNGIRKRYGKVEDYKSGIWGIPYFLKTKGSGTDDTRLSFAVLRGLLKDNPETGLTKEFNKERVKFLHIGRTLFYAYLLHGTNWKCTAKRVHSILKGKTAGNGALMRTLPVALLYDSWDDIVTLTTLQAEMTHLHPISTQSCLIYNRVAFLIMNQVSIRDAIMEATKRTDYENTFLQTPKLPPNGYAFHTLIWVLYWLYHSETFEEAVIGAVNEGGDADTIASLVGGIAGLYYGFNSIPGRFLSLKSRERLDAYTLKICLARSSRHQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL95</accession>
    <name>E3EL95_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YopX domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386341.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0538"/>
    <dbReference type="EnsemblBacteria" id="ADO59927">
        <property type="protein sequence ID" value="ADO59927"/>
        <property type="gene ID" value="PPSC2_28535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6055"/>
    <dbReference type="HOGENOM" id="CLU_1863219_0_0_9"/>
    <dbReference type="OrthoDB" id="1538548at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.290">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023385">
        <property type="entry name" value="YopX-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019096">
        <property type="entry name" value="YopX_protein"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09643">
        <property type="entry name" value="YopX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YopX" evidence="1">
        <location>
            <begin position="5"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="16213" checksum="F78EFBB944E48A71" modified="2011-01-11" version="1">MNEMKFKIWDQKEHKMYKWLNGEPQEELIEHFLESVEIMGLTFFKRPGQKYLLYSGQKDKLENEYCDGDIVKVNKFTFESSAPLPENLIVRNYGGMFQLFRGKESLMGLHLSYIEDGEIVGNIYENPEMLELMNKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELE6</accession>
    <name>E3ELE6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF6440 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_28290</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386392.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0589"/>
    <dbReference type="EnsemblBacteria" id="ADO59978">
        <property type="protein sequence ID" value="ADO59978"/>
        <property type="gene ID" value="PPSC2_28290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5999"/>
    <dbReference type="HOGENOM" id="CLU_2233878_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045515">
        <property type="entry name" value="DUF6440"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20037">
        <property type="entry name" value="DUF6440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169043" description="DUF6440 domain-containing protein" evidence="1">
        <location>
            <begin position="31"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="DUF6440" evidence="2">
        <location>
            <begin position="44"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="11872" checksum="4A1F176B63677B29" modified="2011-01-11" version="1">MKKLFGIIAILFVVVMSGCTTNQNQTQSIAENMPNGYSDRFIESEVYKHKVGDKYNYQYVITDKKTNVQYLVLSTARRNSDGGIAITPIINGDGKPYMTLHMDKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC97</accession>
    <name>A0A0D5ZC97_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">tnpIS3D</name>
        <name evidence="1" type="ORF">PPSC2_15010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44268.1"/>
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        <property type="gene ID" value="PPSC2_15010"/>
    </dbReference>
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    <dbReference type="Proteomes" id="UP000006868">
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    </dbReference>
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    </dbReference>
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        <property type="project" value="InterPro"/>
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        <property type="project" value="InterPro"/>
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        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
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        <property type="entry name" value="Transposase_8"/>
    </dbReference>
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        <property type="entry name" value="HTH_Tnp_1"/>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11796" checksum="2E81CEDCB7E59FDC" modified="2015-05-27" version="1">MAKKGQSFRQYSLDVKMEAVRLVNEEHMSIREVTKQLDIRNKSQVQSWVTKYRAGENLQPTTTRQGRPKTKFSSMEEEMAYLRAEIEYLKKQYPNLHKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCC4</accession>
    <name>A0A0D5ZCC4_PAEPS</name>
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            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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    </gene>
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    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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        <property type="gene ID" value="PPSC2_18430"/>
    </dbReference>
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    <dbReference type="eggNOG" id="ENOG5032WS0">
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    <dbReference type="HOGENOM" id="CLU_1738289_0_0_9"/>
    <dbReference type="OrthoDB" id="1456773at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="18015" checksum="9A9FE155F317DE13" modified="2015-05-27" version="1">MSDEEIVHLIFEDRQDIEVILSDLELSLNESVLKYGLSTKKFLYLDYRGEQSMEIVNYILDYEFAHSLELASQKELEELGEFDYEYIPDKIKEVNKLIYPKRYGLFTYPTSGDYYALFIAKLEHKSKLLRAELLVDEWTPYKERCIQYYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCC8</accession>
    <name>A0A0D5ZCC8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
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        <location>
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    <feature type="transmembrane region" description="Helical" evidence="1">
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    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="14162" checksum="19D2E422C1829E66" modified="2015-05-27" version="1">MLKNPYYLTFVLLVWLIASLVLRISYNYPNTLYNWLLASLIIRLIVRAIHATYQKNEKISRITDRIVELFMLLISFGVIISIFSTKDFSWSDQLIFLLAELYLLIGVCVNIFEIRRKGRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCE4</accession>
    <name>A0A0D5ZCE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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    </gene>
    <organism evidence="1 2">
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    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PPSC2_12535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2659"/>
    <dbReference type="HOGENOM" id="CLU_2956316_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6742" checksum="7CC7A244C29BD2CA" modified="2015-05-27" version="1">MGVWSSGFVVKSLFTCNAEEQKGLAMHVASKVKFIKLKGRIVNFFTNTLHLKEICEIRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCK9</accession>
    <name>A0A0D5ZCK9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_22085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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    </dbReference>
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    <dbReference type="EnsemblBacteria" id="AKA44316">
        <property type="protein sequence ID" value="AKA44316"/>
        <property type="gene ID" value="PPSC2_22085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4701"/>
    <dbReference type="HOGENOM" id="CLU_2863643_0_0_9"/>
    <dbReference type="OrthoDB" id="1997195at2"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7678" checksum="5AE01EEF865B267A" modified="2015-05-27" version="1">MVFISMQAVREKPIHWLPSKQACGDRQLWKMTAENMLLHDVRRFRKDEANLIPIPMEDEARDHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCN2</accession>
    <name>A0A0D5ZCN2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886173.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0205"/>
    <dbReference type="EnsemblBacteria" id="AKA44373">
        <property type="protein sequence ID" value="AKA44373"/>
        <property type="gene ID" value="PPSC2_27140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5740"/>
    <dbReference type="HOGENOM" id="CLU_1439780_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021683">
        <property type="entry name" value="DUF3267"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11667">
        <property type="entry name" value="DUF3267"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="21348" checksum="610E9D34FE7AE4F6" modified="2015-05-27" version="1">MQKIGEIHRGNANIWYGIGIGFVLTAVSLWLSIWALDLDISLYLQANKIWEVLLILPTMLLAFVIHECIHVVLFKLFGKGKARIKVSREKSVGAVVMHQVNEEVFYKRWEMIIILLSPLMLLSLFFYGLHLCITMPFLIVVNIVLNAIGSSVDVYASLILLCKGCPNIVVNFDSSMVKMNIYHLNKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCR0</accession>
    <name>A0A0D5ZCR0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886215.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44346">
        <property type="protein sequence ID" value="AKA44346"/>
        <property type="gene ID" value="PPSC2_26245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5526"/>
    <dbReference type="HOGENOM" id="CLU_1873392_0_0_9"/>
    <dbReference type="OrthoDB" id="1998386at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="136" mass="15934" checksum="592E87D0CB7FAAC8" modified="2015-05-27" version="1">MRMKKFEYKKVSFWDLTDGYHSQLDVKHLNQLGQDGWELITAVNGEYIFKRQITVVKGYEFKLYYGGELVKTIQYNGGMLSALKTARRILNRRKYTCVGIYKDGKRIKEYKLAGDQLLCSPYPPYKGAIHDESENY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCV0</accession>
    <name>A0A0D5ZCV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44352">
        <property type="protein sequence ID" value="AKA44352"/>
        <property type="gene ID" value="PPSC2_26390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5562"/>
    <dbReference type="HOGENOM" id="CLU_2247366_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="104" mass="12563" checksum="77093B007109D52B" modified="2015-05-27" version="1">MSFSVYLFVLTSWSLLASFLFAFQFSAFSSNDINKILKFPNPFRVHHLIQLIFFLPVFVLVVIGYALYYYFSYMYTYVYRPIYTHIIKFLQLKLWEKKTNIPTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E478</accession>
    <name>E3E478_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sodium:melibiose symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yagG</name>
        <name evidence="4" type="ORF">PPSC2_12435</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371222.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2649"/>
    <dbReference type="EnsemblBacteria" id="ADO56618">
        <property type="protein sequence ID" value="ADO56618"/>
        <property type="gene ID" value="PPSC2_12435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2637"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027408_0_0_9"/>
    <dbReference type="OMA" id="GLYTAWM"/>
    <dbReference type="OrthoDB" id="1249292at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001927">
        <property type="entry name" value="Na/Gal_symport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="PTHR11328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00792">
        <property type="entry name" value="gph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="35"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="58"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="97"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="126"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="161"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="245"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="280"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="311"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="333"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="376"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="420"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="462" mass="50082" checksum="DA89DF58DF945A40" modified="2011-01-11" version="1">MRSSSDIVVMGNETSVQTGSNITLKEKIGYGFGDFASQLLFAAAMTFLSYFYTDVIGISAGVIGTLMLVARVLDAFIDVAIGALIDKTKSRHGKARPWLLWMSGPFALSGILLFTVPSGNMTITILYIYVTYLLMNFIYSSINVPYGVLNSMITQDSYQRSLLNIFRMSLANIGALLINYFTLPLVKSFGGGQKGWIYTFIIFGLLGTFLFLVTFFSTKERVTPSVVQKPIPFGRAFGALMRNKYWKLILGFAVVYFINNALGTGMNIYYARYVLKDANLIGVLGISLLLPSLFGYMLLPPVVKRIGKRNSSIIGSILLIVGSLVIAVSPTSLMAVCLGLVIKALGHAAILGTFFAMLADTIEYGEWKTGMRTEGLVYSAGSFGTKAGGGLGAALIGWGLALGGYAGGQATISTTALASIHFMFIYVPIILAILQILLLAFYNLDKLFPGIVKELEFLKNAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4I1</accession>
    <name>E3E4I1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cell division protein FtsJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371483.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01365"/>
    <dbReference type="EnsemblBacteria" id="ADO56880">
        <property type="protein sequence ID" value="ADO56880"/>
        <property type="gene ID" value="PPSC2_13675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2909"/>
    <dbReference type="eggNOG" id="ENOG5032TAJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_166822_1_0_9"/>
    <dbReference type="OMA" id="FCTEGLY"/>
    <dbReference type="OrthoDB" id="2008003at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12655" checksum="75128911C3BFBAC0" modified="2011-01-11" version="1">MYLFMDDYRPCPPGFKLARDADECLLLLHEYPISILSLDYDLGPGQPTGKDVAAAIASKQLYPREIYLHSSSPQGRRAMYDLLYASKPEGVTVHNGPIPEVRMQEILNESKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4J1</accession>
    <name>E3E4J1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0291 protein PPSC2_13720</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0291 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371493.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01410"/>
    <dbReference type="EnsemblBacteria" id="ADO56890">
        <property type="protein sequence ID" value="ADO56890"/>
        <property type="gene ID" value="PPSC2_13720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2919"/>
    <dbReference type="eggNOG" id="COG4224">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_173137_3_2_9"/>
    <dbReference type="OMA" id="YLGNIRR"/>
    <dbReference type="OrthoDB" id="2005891at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01103">
        <property type="entry name" value="UPF0291"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009242">
        <property type="entry name" value="DUF896"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37300">
        <property type="entry name" value="PTHR37300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05979">
        <property type="entry name" value="DUF896"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="7906" checksum="609AB651D52A4ABD" modified="2011-01-11" version="1">MDIDSLVQRINELARKAKAEGLTEEETTERANLREIYLGNIRRNFRQQLETIEFVDDDTSKGNDGLKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4M6</accession>
    <name>E3E4M6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371526.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2964"/>
    <dbReference type="EnsemblBacteria" id="ADO56925">
        <property type="protein sequence ID" value="ADO56925"/>
        <property type="gene ID" value="PPSC2_13870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2961"/>
    <dbReference type="HOGENOM" id="CLU_2701360_0_0_9"/>
    <dbReference type="OMA" id="ASQPHKR"/>
    <dbReference type="OrthoDB" id="2076303at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="73" mass="7971" checksum="FE6F980874653291" modified="2011-01-11" version="1">MAKIKSTLDIQLDLTRPVEDLTEIISAVIASQPHKRKEILEGLDIAVGNALAEIQAQEEKEQKVDDDSSGKVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4P4</accession>
    <name>E3E4P4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">SanA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sanA</name>
        <name evidence="3" type="ORF">PPSC2_13945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371543.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01600"/>
    <dbReference type="EnsemblBacteria" id="ADO56943">
        <property type="protein sequence ID" value="ADO56943"/>
        <property type="gene ID" value="PPSC2_13945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2979"/>
    <dbReference type="eggNOG" id="COG1434">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051474_3_0_9"/>
    <dbReference type="OMA" id="LAYAKWT"/>
    <dbReference type="OrthoDB" id="1879123at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06259">
        <property type="entry name" value="YdcF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003848">
        <property type="entry name" value="DUF218"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02698">
        <property type="entry name" value="DUF218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="DUF218" evidence="2">
        <location>
            <begin position="72"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="26660" checksum="BE2D129F6B181202" modified="2011-01-11" version="1">MKFLQWIKSTGPQLHEPKSRQSRNGKIFMVSKRFILGLMIFILVGFVWAGIRVWNMNTAASTNPLQHAQIGIVLGASMWGAEPSPGLKERLEEALWLYRNGTVQRLIVSGGLDQPDFPYTEAEGMQRYLVDRGVPVQHILLENQATSTYENLLYSQRIMKEYDWNSTVIITHSYHGPRAMEIAQFLNFDHPQMALTESKVLNMPIHQSREVLAYAKWTLQRWWISAQTWIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Q4</accession>
    <name>E3E4Q4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">3-hydroxybutyryl-CoA dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hbd2</name>
        <name evidence="5" type="ORF">PPSC2_14380</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371631.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02040"/>
    <dbReference type="EnsemblBacteria" id="ADO57032">
        <property type="protein sequence ID" value="ADO57032"/>
        <property type="gene ID" value="PPSC2_14380"/>
    </dbReference>
    <dbReference type="GeneID" id="66577102"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3069"/>
    <dbReference type="eggNOG" id="COG1250">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009834_2_0_9"/>
    <dbReference type="OMA" id="CKLGFGH"/>
    <dbReference type="OrthoDB" id="862072at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022694">
        <property type="entry name" value="3-OHacyl-CoA_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006176">
        <property type="entry name" value="3-OHacyl-CoA_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02737">
        <property type="entry name" value="3HCDH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000105">
        <property type="entry name" value="HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH_N" evidence="4">
        <location>
            <begin position="5"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="3">
        <location>
            <begin position="187"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="56"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalytic activity" evidence="1">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000105-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000105-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="32462" checksum="A29F17509D3364E6" modified="2011-01-11" version="1">MQFKKIGVIGGGTMGQGISEMLASKGIDVLLVEQTPEKLDYAYNMIETSLDKQLEKWAITQAEKKLILSRIEKVSHLAELASCDMVIETITENLDEKKVVFQELDHVCPSNIILASNTSTLSLTELASSTKYPERVIGMHFIYPVSRIDLVEIIRGLKTSDDTFENTKMFVEEIVEKKGVMIYESPGFVTSRIICLLINEAAHVLQEGVASAEDIDDAMRIGYNFQNGPLEMADRFGLDSVLAALERMFREFGELKYRPSIVLKKMVRAGNLGVKSGEGFFKYDKDGDRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E542</accession>
    <name>E3E542_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 10 11">Ribulose-phosphate 3-epimerase</fullName>
            <ecNumber evidence="7 10 11">5.1.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 15" type="primary">rpe</name>
        <name evidence="15" type="ORF">PPSC2_15405</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10 11">
            <text>D-ribulose 5-phosphate = D-xylulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:13677"/>
            <dbReference type="ChEBI" id="CHEBI:57737"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="EC" id="5.1.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10 13">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="10 13">Binds 1 divalent metal cation per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="10">Carbohydrate degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 10 11">Belongs to the ribulose-phosphate 3-epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.1" evidence="7 10 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371840.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03055"/>
    <dbReference type="EnsemblBacteria" id="ADO57250">
        <property type="protein sequence ID" value="ADO57250"/>
        <property type="gene ID" value="PPSC2_15405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3292"/>
    <dbReference type="eggNOG" id="COG0036">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054856_2_1_9"/>
    <dbReference type="OMA" id="WLQVDGG"/>
    <dbReference type="OrthoDB" id="1697639at2"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00106"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004750">
        <property type="term" value="F:D-ribulose-phosphate 3-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019323">
        <property type="term" value="P:pentose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00429">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02227">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026019">
        <property type="entry name" value="Ribul_P_3_epim"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000056">
        <property type="entry name" value="Ribul_P_3_epim-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11749">
        <property type="entry name" value="PTHR11749"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00834">
        <property type="entry name" value="Ribul_P_3_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001461">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01163">
        <property type="entry name" value="rpe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01085">
        <property type="entry name" value="RIBUL_P_3_EPIMER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01086">
        <property type="entry name" value="RIBUL_P_3_EPIMER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="13" id="KW-0170">Cobalt</keyword>
    <keyword evidence="9 10 11" id="KW-0413">Isomerase</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="8 10 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="10 14">
        <location>
            <begin position="141"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="175"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10 14">
        <location>
            <begin position="197"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10 12">
        <location>
            <position position="34"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10 12">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10 14">
        <location>
            <position position="7"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 13">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 13">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 13 14">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10 13">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00009541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR001461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO57250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="23560" checksum="AE13D12BEC13C808" modified="2011-01-11" version="1">MLKIAPSILSADFARLGSEVAEVQAAGADWIHVDVMDGHFVSNITLGPPIVQAIRPHTTLPLDVHLMIEQPERYIGDFVKAGANIITVHAEACVHLHGVIHLIKQQGALAGVALNPGTSPYAIKEVLPNVDMILVMTVNPGFGGQSFIPETLNKIRQIRAWLNELGRPDVHIEVDGGIAEETAPAVFEAGADVLVAGSAVYGRADRAAAITAIRDSVAHLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5B6</accession>
    <name>E3E5B6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Orotidine 5'-phosphate decarboxylase</fullName>
            <ecNumber evidence="7">4.1.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">OMP decarboxylase</fullName>
            <shortName evidence="7">OMPDCase</shortName>
            <shortName evidence="7">OMPdecase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">pyrF</name>
        <name evidence="10" type="ORF">PPSC2_16475</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7 8">
            <text>H(+) + orotidine 5'-phosphate = CO2 + UMP</text>
            <dbReference type="Rhea" id="RHEA:11596"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57538"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="EC" id="4.1.1.23"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 7 8">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the OMP decarboxylase family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.23" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57476.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03810"/>
    <dbReference type="EnsemblBacteria" id="ADO57476">
        <property type="protein sequence ID" value="ADO57476"/>
        <property type="gene ID" value="PPSC2_16475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3517"/>
    <dbReference type="eggNOG" id="COG0284">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067069_1_1_9"/>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00120"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004590">
        <property type="term" value="F:orotidine-5'-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01200_B">
        <property type="entry name" value="OMPdecase_type1_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014732">
        <property type="entry name" value="OMPdecase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018089">
        <property type="entry name" value="OMPdecase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001754">
        <property type="entry name" value="OMPdeCOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32119:SF2">
        <property type="entry name" value="PTHR32119:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00215">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00934">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01740">
        <property type="entry name" value="pyrF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00156">
        <property type="entry name" value="OMPDECASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="6 7 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 7 8" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OMPdecase" evidence="9">
        <location>
            <begin position="11"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="66"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57476.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="25953" checksum="AB19B568C1184733" modified="2015-05-27" version="2">MNEAFQQMAGRLMVALDYPDAQQAEQLIRQLEGIPCYIKVGMQLFYSAGPAFVKQLKSRGYSVFLDLKMHDIPNTVRGGAESITRLGVDMFNVHAAGGRSMMSAARAGAEAAISADSSLTMPLIIAVTQLTSTDQTTMNTELGIPGTVQDAVVRYAQLTREAGLDGVVASPLEVPAIRAVCGSDFKTITPGIRPAGSATGDQSRVLTPEQAIAQGSSYIVVGRPITAASDPRAAAKHIIEEMIQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F3</accession>
    <name>E3E5F3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">yjgC</name>
        <name evidence="16" type="ORF">PPSC2_17380</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mo-bis(molybdopterin guanine dinucleotide)</name>
            <dbReference type="ChEBI" id="CHEBI:60539"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the prokaryotic molybdopterin-containing oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372253.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04720"/>
    <dbReference type="EnsemblBacteria" id="ADO57672">
        <property type="protein sequence ID" value="ADO57672"/>
        <property type="gene ID" value="PPSC2_17380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3713"/>
    <dbReference type="eggNOG" id="COG3383">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000422_2_0_9"/>
    <dbReference type="OMA" id="NLAWCHP"/>
    <dbReference type="OrthoDB" id="323168at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008863">
        <property type="term" value="F:formate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015942">
        <property type="term" value="P:formate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02753">
        <property type="entry name" value="MopB_Formate-Dh-H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041924">
        <property type="entry name" value="Formate_Dh-H_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006478">
        <property type="entry name" value="Formate_DH_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019574">
        <property type="entry name" value="NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12838">
        <property type="entry name" value="Fer4_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10588">
        <property type="entry name" value="NADH-G_4Fe-4S_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00929">
        <property type="entry name" value="NADH-G_4Fe-4S_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01591">
        <property type="entry name" value="Fdh-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51839">
        <property type="entry name" value="4FE4S_HC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="5 11" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9 11" id="KW-0408">Iron</keyword>
    <keyword evidence="10 11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="12">
        <location>
            <begin position="4"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S His(Cys)3-ligated-type" evidence="15">
        <location>
            <begin position="80"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="13">
        <location>
            <begin position="142"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="13">
        <location>
            <begin position="185"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="14">
        <location>
            <begin position="261"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="271"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="303"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO57672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="980" mass="109299" checksum="9C82AA9FED996EB0" modified="2011-01-11" version="1">MTDSTIKITLNGQELKTNSSATILEVINENNIAHPQLCYVPEVDPIRTCDTCIVEVDGKLVRSCSTLATNGMNIHLHSDRAKAAQTEAMDRLLENHLLYCTVCDNNNGNCKLHNTAELMEIEHQKYPYRPKVDPTEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSLDWEAERPRVIWDEGVAINDSSCVSCGQCVTVCPCNALMEKSMLGEAGFMSGINKDLLNPMVDLIKEVEPGYSGIFAISEAEAAMRETRTKKTKTVCTFCGVGCSFEVWTKGRKILKVQPTSEGPVNGISTCVKGKFGWDFVNSDQRLTSPLIRQGDEFVEATWEEALSLMASKMGAIKETYGGEALGFISSSKFTIEENYLMQKLARQVFQTNNVDNCSRYCQSPASWGLQYTGGIGGDSGTIKDIASAGLVILVGCAPGEGHPVLATRIKRAHKLHGQKLISVDLRKHEMAERADLFMRPKQGTDYVWLSAVAKYIIEQNWHDAKFIEEHVNFYPEYLKLLENFTLEFAEQETGISKETLIQVATMIHEADGTAICWGMGVTQNIAGSYTSIAIANLLLVTGNFMRPGAGAYPLRGHNNVQGAADMGTMPDIFPGYQPVTNDAIRSKFEAAYGVQIPSQRGLDNIQMLEAIETGKLKGMYIAGEEMAWVDADSNHTQEMLANLDFLVVQDVFLSKTAEFADVILPAVPSLEKDGTFTNTERRVQRLYEALRPVGDSKPDWWIFSQFAKHMGFDWDYSHPSEIFEEMAALTPFFSQCNYDVLEGWNSFHWGSPDGSNTPLLHTNGFNFPDKKARLGLFEYVPPKEYPAEFDLTLNNGRLLEQFHEGNMTTKSTGLQLKLPKVFVEVSPELAEERGVTDGSLVRLESPYGAVKLRVLVTDRVQGTEIYVPMHSTSHEGAVNLLTGGAFDVITRTPAYKQTKVRMQILEIDGQNPLPRINPRYKKRHPQNGVEVNRKWNRPGYVDLVDQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5G9</accession>
    <name>E3E5G9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/purescine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potC1</name>
        <name evidence="7" type="ORF">PPSC2_17455</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372269.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04795"/>
    <dbReference type="EnsemblBacteria" id="ADO57688">
        <property type="protein sequence ID" value="ADO57688"/>
        <property type="gene ID" value="PPSC2_17455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3729"/>
    <dbReference type="eggNOG" id="COG1177">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_3_0_9"/>
    <dbReference type="OMA" id="FPMFVWG"/>
    <dbReference type="OrthoDB" id="1264541at2"/>
    <dbReference type="Proteomes" id="UP000006868">
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        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
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        <property type="match status" value="1"/>
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    </dbReference>
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        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
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    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="228"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="61"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="30298" checksum="6737BB8CBA429DA5" modified="2011-01-11" version="1">MVNKNRFGNIYLVIVFLVLYAPILYLMYYSFNSGGTMHEFEGFTLQYYKEVFADTRLIIIVINTLVIALLSSALATIIGIMGALAIHQMQNRRVKNTLLSLNNVLIVNPDVIIGASFLILFTMVGIKLGFYSVLLSHIAFSVPIAVIMILPRLQEMSPSLVDAARDLGASRLDVLTKVILPFIKPGIYAGFFMALTYSLDDFAVTFFVTGSGYSTLSVEIYSRARQGVSLSINALSTLIFLFTVLLVVGYYFIMRKANRNGKKEPAAEMGVPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N6</accession>
    <name>E3E5N6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18480</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05695"/>
    <dbReference type="EnsemblBacteria" id="ADO57913">
        <property type="protein sequence ID" value="ADO57913"/>
        <property type="gene ID" value="PPSC2_18480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3961"/>
    <dbReference type="eggNOG" id="COG1413">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147314_0_0_9"/>
    <dbReference type="OMA" id="HTYNDFR"/>
    <dbReference type="OrthoDB" id="1430624at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="17253" checksum="2BB9552B0E1F4A5A" modified="2011-01-11" version="1">MENNETQQEFAEVYEQLKVAANRTSDWKARLAAVNDLGAWKNQQTIDLLTHRMNNDMVYAVQEAAYHKLQEWGENVQPPVRKEGELVKGLTKILVRIKKSLPADHTYNDFREKLHKMRVDIYDVYEGDKGAEFDQWLEQKWASLSTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Z1</accession>
    <name>E3E5Z1_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07150"/>
    <dbReference type="EnsemblBacteria" id="ADO58210">
        <property type="protein sequence ID" value="ADO58210"/>
        <property type="gene ID" value="PPSC2_19930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4247"/>
    <dbReference type="eggNOG" id="COG4587">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084465_1_2_9"/>
    <dbReference type="OMA" id="YALWFAR"/>
    <dbReference type="OrthoDB" id="1552415at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010390">
        <property type="entry name" value="DUF990"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06182">
        <property type="entry name" value="ABC2_membrane_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="208"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="238"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="29707" checksum="D4F13DA1A8AF8CA8" modified="2011-01-11" version="1">MRNNKYVKVLQLGMQNEMEYRANYWLQMAGFMLPIMTQIFLWLAVFGSSGQARVVDYSLPEMLVYVVMAGVTGKLIATGFEYEIATDIKEGGLAKFMVQPVHYFAYRFCRFIGGKVIQSAVVLLAAAILLLCLSLEGQISFELSYILLYILALPGALVLNFVVYYALSGIAFWVTESAGLFYTLSLVIYVASGTVFPLTIFGDALARLFSLLPFSYTVFFPVNALTGKLTVLEAAKGIGVQWLWIVVLAAVSRWVWQAGVKRFVSVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E643</accession>
    <name>E3E643_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NAD(P)-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yhhX</name>
        <name evidence="3" type="ORF">PPSC2_12935</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371332.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00620"/>
    <dbReference type="EnsemblBacteria" id="ADO56728">
        <property type="protein sequence ID" value="ADO56728"/>
        <property type="gene ID" value="PPSC2_12935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2756"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_19_0_9"/>
    <dbReference type="OMA" id="VAHIYRR"/>
    <dbReference type="OrthoDB" id="1840839at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="132"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="339" mass="39610" checksum="0DFF341EC84A9E41" modified="2011-01-11" version="1">MLTIGYIGNGKSTNRYHLPFSLTRDHLKVKTIYARNPDKGEWEKIPGVQYTDHLESLMNDKEIQLIVVCTPVESHYTYAKMALDHGKNVLIEKPFMLTKEEAVSIFQYAKEKNLIIQCYQNRRYDSDFLTTKKVIESGKLGDLLEVEMHFDYYRPETPNSTSHFSKYNSYLYGHGAHTIDQVLSYFGKPDTIHYDVRQLLGSGRMNDYFDLDFYYPSLKVSIKSSFFRLKERPSFVVYGKKGVFIKQTKDRQEEHLKLYYLPKGHADFGIDQPEHYGILTYLDDDGQYHEEKVVSEKGDYARVYDDLYHSIIHGKEKAITDEETITSMEILEKGIEECN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6M2</accession>
    <name>E3E6M2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ecsB</name>
        <name evidence="2" type="ORF">PPSC2_20245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372854.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07500"/>
    <dbReference type="EnsemblBacteria" id="ADO58282">
        <property type="protein sequence ID" value="ADO58282"/>
        <property type="gene ID" value="PPSC2_20245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4316"/>
    <dbReference type="eggNOG" id="COG4473">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054332_0_0_9"/>
    <dbReference type="OMA" id="RKQRFYR"/>
    <dbReference type="OrthoDB" id="1927626at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010288">
        <property type="entry name" value="EcsB_ABC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05975">
        <property type="entry name" value="EcsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037259">
        <property type="entry name" value="EcsB_ABC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="189"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="280"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="304"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="345"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="372"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="46715" checksum="8108FFD43AF4F5FD" modified="2011-01-11" version="1">MDLQRLHKERRLAFWGQVLPYLGYVIQSGLAVVFGFALIAFAAWYTSLLMHIPPDLPIRWIMLIVAIPIAHASFRTYLNEADIVFLRPQEHAMPQYFKASRIRGVVYKIFGLLLLSIILWPLYIRSDAAPKPLLLTLLLFVLLKLLFSYGGWQELRMVSVGGSVGYRLLRWVLAVLMVAAWLWQPPLHSLPFIVLVGVVYVLVLRLPVKLLVAWEKLIRTEGMQAARVMRTLGWFVDVPALTQRVTPRRWLSWLGGNIPWNRRGAYRYLLFKTFLRTEPAGIVIRLGILGLLIIYITHASWIGIAVYLFFIFLIGVQITSLRQYHRDSLWLQLYPIPAHSRRASFLDFVVRLTLPAAVVLWLPFLAKGTEDLLSTVLILVGGVLVVFLLRGTQAKKWRLDGQDEEEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6M8</accession>
    <name>E3E6M8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">Histidinol-phosphatase</fullName>
            <shortName evidence="7">HolPase</shortName>
            <ecNumber evidence="4 7">3.1.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">hisJ3</name>
        <name evidence="9" type="ORF">PPSC2_20275</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H2O + L-histidinol phosphate = L-histidinol + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14465"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57699"/>
            <dbReference type="ChEBI" id="CHEBI:57980"/>
            <dbReference type="EC" id="3.1.3.15"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 8/9.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the PHP hydrolase family. HisK subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.15" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372860.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07530"/>
    <dbReference type="EnsemblBacteria" id="ADO58288">
        <property type="protein sequence ID" value="ADO58288"/>
        <property type="gene ID" value="PPSC2_20275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4322"/>
    <dbReference type="eggNOG" id="COG1387">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054611_2_0_9"/>
    <dbReference type="OMA" id="DYDRPMY"/>
    <dbReference type="OrthoDB" id="1615112at2"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004401">
        <property type="term" value="F:histidinol-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010140">
        <property type="entry name" value="Histidinol_P_phosphatase_HisJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004013">
        <property type="entry name" value="PHP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21039">
        <property type="entry name" value="PTHR21039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02811">
        <property type="entry name" value="PHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="SSF89550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01856">
        <property type="entry name" value="hisJ_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHP" evidence="8">
        <location>
            <begin position="4"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU366003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="269" mass="30614" checksum="4A3E5BC6949F0B10" modified="2011-01-11" version="1">MKFDLHTHHFRCGHADGNIRDYIEAGIQSGLQAIGISDHSPFLCNEKDQAFPKIYMAKSQLAEYVKEVQELKKEYEGRIDVLLGLETDYFPDFVELYRSTLAPYPFDYLIGSIHNVEGDSIFNRNRWKKLSDARKVEVKQAYYALIQQSARSGMFQILGHIDAMKGNFPAFSDIPADEAIDETLRVIAESNVAIEINTSGKTKLSGGWYPSASILERAHHFGVEVTFGSDAHKPSRVGDDWEDVKAMLKDIGFREWVYFKEKRKIPVAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6T8</accession>
    <name>E3E6T8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Iron ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fhuC1</name>
        <name evidence="5" type="ORF">PPSC2_21290</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373058.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08520"/>
    <dbReference type="EnsemblBacteria" id="ADO58490">
        <property type="protein sequence ID" value="ADO58490"/>
        <property type="gene ID" value="PPSC2_21290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4526"/>
    <dbReference type="eggNOG" id="COG1120">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
    <dbReference type="OMA" id="KALCQEI"/>
    <dbReference type="OrthoDB" id="1048863at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="1"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="31285" checksum="14057E5D93C0B95D" modified="2011-01-11" version="1">MDIKDITFSYDRKTDRLHAINAVIERGRITTIIGPNGCGKSTLLSVMSNNAVPRMGQVILDGKEIAHYKPKELARQLAVVHQQNEAPSDLTVEKLVSFGRLPHKSMFTTSRDEDEEAVEWAIACTNLEERRTHTLDQLSGGERQRVWIAMALAQRTPILFLDEPTTYLDMYYQLEILELIRQLNQEHGLTIVMVLHDINQAIRYSDVMIAMKEGRIIANGPPKEIVTSELIQAVYGVKVVIRQDEEAGMYLIPIGVGASEHLQVQRECKVSVLELSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7F7</accession>
    <name>E3E7F7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">msmG</name>
        <name evidence="7" type="ORF">PPSC2_24515</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373701.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11990"/>
    <dbReference type="EnsemblBacteria" id="ADO59168">
        <property type="protein sequence ID" value="ADO59168"/>
        <property type="gene ID" value="PPSC2_24515"/>
    </dbReference>
    <dbReference type="GeneID" id="66575167"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5193"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_2_9"/>
    <dbReference type="OMA" id="MTAMVMA"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="181"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="240"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="30759" checksum="0064F44BB1A4BBCA" modified="2011-01-11" version="1">MQRSRTGRILLEAGMIVLSLLFLYPLFLAINNSFKSFAEVMTDVIALPKQLSLDNYVYVWKFIDYPRLFLNNTIITVLGLAGIVLISSIAAYKLARTKSKWSSAIYMLCIMPMLIPFQSIMLTVLRLAKDLNLADSTWGLGLLYWGFGAPLAVFIYHGFVKGIPVEIDESAKIDGASGFRLFFSVIFPLLKSVTATIVIIDVMWIWNDFLLPLLMVNGSPSTKTLTLAAYTFVGQYTSDWQYAMTAMVMAVLPSIIVFIFLQKYIVKGVVAGAVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7X3</accession>
    <name>E3E7X3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Formate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hydN</name>
        <name evidence="5" type="ORF">PPSC2_14250</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371605.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01905"/>
    <dbReference type="EnsemblBacteria" id="ADO57006">
        <property type="protein sequence ID" value="ADO57006"/>
        <property type="gene ID" value="PPSC2_14250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3042"/>
    <dbReference type="eggNOG" id="COG1142">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043374_3_0_9"/>
    <dbReference type="OMA" id="APVQCRH"/>
    <dbReference type="OrthoDB" id="1762646at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13247">
        <property type="entry name" value="Fer4_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="2"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="81"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="21146" checksum="2E5F256EA9888C3C" modified="2011-01-11" version="1">MNRFVLADPDQCIGCRTCEIACVIAHSSENPFISPDDEFHFHPRLKVIKSFGVTAPVQCRHCEDAPCANACPNGSITNADGCILINSESCIGCKTCMIACPYGAITMVPQYRDGQPVVQDGLYTNVSGRLQPKERMIASKCDLCEGVDGGPACIGKCPTQALKLVEPDLVHARVEEKRAASARQLLHMTRIPATGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E876</accession>
    <name>E3E876_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rqc2 homolog RqcH</fullName>
            <shortName evidence="1">RqcH</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yloA</name>
        <name evidence="1" type="synonym">rqcH</name>
        <name evidence="3" type="ORF">PPSC2_15495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Part of the ribosome quality control system (RQC). Recruits Ala-charged tRNA and directs the elongation of stalled nascent chains on 50S ribosomal subunits, leading to non-templated C-terminal Ala extensions (Ala tail). The Ala tail promotes nascent chain degradation. May add between 1 and at least 8 Ala residues. Binds to stalled 50S ribosomal subunits.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Associates with stalled 50S ribosomal subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NEMF family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371857.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03145"/>
    <dbReference type="EnsemblBacteria" id="ADO57268">
        <property type="protein sequence ID" value="ADO57268"/>
        <property type="gene ID" value="PPSC2_15495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3310"/>
    <dbReference type="eggNOG" id="COG1293">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022481_2_1_9"/>
    <dbReference type="OMA" id="SKPGFVI"/>
    <dbReference type="OrthoDB" id="713667at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043023">
        <property type="term" value="F:ribosomal large subunit binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072344">
        <property type="term" value="P:rescue of stalled ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00844_B">
        <property type="entry name" value="RqcH_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008532">
        <property type="entry name" value="NFACT_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043682">
        <property type="entry name" value="RqcH_bacterial"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05670">
        <property type="entry name" value="NFACT-R_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="NFACT-R_1" evidence="2">
        <location>
            <begin position="459"/>
            <end position="556"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="582" mass="66449" checksum="01F4DA8C811A58C6" modified="2011-01-11" version="1">MALDGIVTRAIVHELQAIRGGRINKIHQPNERDIVLNLRVQGGSVKLLLSANPTFPRVHFTEQSFLNPTEAPMFCMLLRKHCEGGIIENITQVGMERIIHMDIRQRDELGDISFKRIIIEVMGRHSNIILLDPETGVMLDGIHHVTPSISSYRVVMPGFQYTEPPEQNKLDPLEVEEAAFFSSYQAAIEAEEAPKRWIVNTFTGLSPLIAEEILIRASNEEASGDKDRRLWRAFSDIMDDVRNHHFQPVSGLNAQDKVIFSAIPLTLIQGERKEYTTISECMEDFFGEKAERDTVKQKVSDLLRFLQNERSKNLKKLDHLHQDLAEAEDADQFRIYGELLFASLHEVKKGDKEVTLTNFYDEEQSAITIPLDPLLNPSDNAQRYFKKYNKYKNSLAVIDEQLEKTHDEIRYMDNLLQQLAHASINDIEEIREELVQQGYLRDRVKKGKKKKKNDRPTLHVYTSSEGIELLVGKNNLQNEYVTNRLAGPNDTWLHTKDIPGSHVVIRAEKFGDATLEEAAQLAAYFSQAKQSSSVPVDATLIRHVRKPSGAKPGFVIYDHQRTLFITPDEELVKKLPNRIKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8J1</accession>
    <name>E3E8J1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372124.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57541">
        <property type="protein sequence ID" value="ADO57541"/>
        <property type="gene ID" value="PPSC2_16775"/>
    </dbReference>
    <dbReference type="GeneID" id="66576691"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3580"/>
    <dbReference type="HOGENOM" id="CLU_195272_0_0_9"/>
    <dbReference type="OrthoDB" id="1964651at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="76" mass="8643" checksum="45B374E23A40B0F7" modified="2011-01-11" version="1">MSHCHYDPVVCPPIQFVNHQFYPQVVPVVHPIEIINQAHVIPVPHHVFPVVVKDPGDPCCHTRSHGKRPVRTSSKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E924</accession>
    <name>E3E924_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Dihydroorotate dehydrogenase</fullName>
            <shortName evidence="6">DHOD</shortName>
            <shortName evidence="6">DHODase</shortName>
            <shortName evidence="6">DHOdehase</shortName>
            <ecNumber evidence="6">1.3.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pyrD</name>
        <name evidence="8" type="synonym">pyrD3</name>
        <name evidence="8" type="ORF">PPSC2_24785</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the conversion of dihydroorotate to orotate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>(S)-dihydroorotate + A = AH2 + orotate</text>
            <dbReference type="Rhea" id="RHEA:18073"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:30864"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="6">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Pyrimidine metabolism; UMP biosynthesis via de novo pathway.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.-.-" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373764.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12280"/>
    <dbReference type="EnsemblBacteria" id="ADO59231">
        <property type="protein sequence ID" value="ADO59231"/>
        <property type="gene ID" value="PPSC2_24785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5253"/>
    <dbReference type="eggNOG" id="COG0167">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042042_0_0_9"/>
    <dbReference type="OMA" id="SCPHAKG"/>
    <dbReference type="OrthoDB" id="1109542at2"/>
    <dbReference type="UniPathway" id="UPA00070"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004152">
        <property type="term" value="F:dihydroorotate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04740">
        <property type="entry name" value="DHOD_1B_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00224">
        <property type="entry name" value="DHO_dh_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033888">
        <property type="entry name" value="DHOD_1B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005720">
        <property type="entry name" value="Dihydroorotate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024920">
        <property type="entry name" value="Dihydroorotate_DH_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012135">
        <property type="entry name" value="Dihydroorotate_DH_1_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01180">
        <property type="entry name" value="DHO_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000164">
        <property type="entry name" value="DHO_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01037">
        <property type="entry name" value="pyrD_sub1_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0288">FMN</keyword>
    <keyword evidence="5 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHO_dh" evidence="7">
        <location>
            <begin position="4"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="69"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="201"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="45"/>
            <end position="46"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="200"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="252"/>
            <end position="253"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="274"/>
            <end position="275"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="33484" checksum="3FF21F44DDD408BB" modified="2011-01-11" version="1">MISMACNIAGVPFKNPIIMASGTFGFGREYAEFYSPELLGGIVGKGLTLHPKAGNTGQRIHETASGMLNSVGLENPGVAAFLKDELDDMTRWNTAVIANVGGSNLEEYVQAVAMITENAQKRRTMNRRGVDMLELNISCPNVKQGGMQFGIQTEVAREVVRQVRNVTALPLVVKLSPNAENITQMAVMCEEEGADGVSLINTFSAMKIDIRRRRSVFANTYAGLSGPAIKPIALRMVHQVAQAVSIPVIGMGGISSVEDIIEFTMAGAAAIQVGTYNFVHLHAGAELVYGLEQWMQQEKVQSLDEIRGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Y0</accession>
    <name>E3E9Y0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Precorrin-2 dehydrogenase</fullName>
            <ecNumber evidence="3">1.3.1.76</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_19470</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>NAD(+) + precorrin-2 = 2 H(+) + NADH + sirohydrochlorin</text>
            <dbReference type="Rhea" id="RHEA:15613"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58351"/>
            <dbReference type="ChEBI" id="CHEBI:58827"/>
            <dbReference type="EC" id="1.3.1.76"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; siroheme biosynthesis; sirohydrochlorin from precorrin-2: step 1/1.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.76" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372686.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06670"/>
    <dbReference type="EnsemblBacteria" id="ADO58113">
        <property type="protein sequence ID" value="ADO58113"/>
        <property type="gene ID" value="PPSC2_19470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4153"/>
    <dbReference type="eggNOG" id="COG1648">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011276_8_1_9"/>
    <dbReference type="OMA" id="STQIWKL"/>
    <dbReference type="OrthoDB" id="1185397at2"/>
    <dbReference type="UniPathway" id="UPA00262">
        <property type="reaction ID" value="UER00222"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004325">
        <property type="term" value="F:ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043115">
        <property type="term" value="F:precorrin-2 dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019354">
        <property type="term" value="P:siroheme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028161">
        <property type="entry name" value="Met8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042518">
        <property type="entry name" value="SirC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006367">
        <property type="entry name" value="Sirohaem_synthase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35330">
        <property type="entry name" value="PTHR35330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01470">
        <property type="entry name" value="cysG_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="215" mass="24324" checksum="6B7A02B88B1598F3" modified="2011-01-11" version="1">MQHFVPISLNCNNKLCCVVGGGRIAERKVKGMMESGASITVISPNITPDLQVLADHKQLHWVNRVYREGDLQGAFLVYAATNQREVNNKVAHEARQRGILVNVADHSEEGDFITPGIIRRGRLTISISTEGAGPAVTADITSALDTLFGSEYEPYLDFMHDMRQIIKRKISSPQQRTKLLRRLASSEILEQIRRHEFMAWTEKEIDLWIAQNQEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z0</accession>
    <name>E3E9Z0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">ATP-dependent Clp protease proteolytic subunit</fullName>
            <ecNumber evidence="2">3.4.21.92</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Endopeptidase Clp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">clpP</name>
        <name evidence="5" type="synonym">clpP5</name>
        <name evidence="5" type="ORF">PPSC2_19520</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2 4">Belongs to the peptidase S14 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.92" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58123.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324659.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06720"/>
    <dbReference type="MEROPS" id="S14.001"/>
    <dbReference type="EnsemblBacteria" id="ADO58123">
        <property type="protein sequence ID" value="ADO58123"/>
        <property type="gene ID" value="PPSC2_19520"/>
    </dbReference>
    <dbReference type="GeneID" id="66576164"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4163"/>
    <dbReference type="eggNOG" id="COG0740">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058707_3_2_9"/>
    <dbReference type="OrthoDB" id="1728970at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07017">
        <property type="entry name" value="S14_ClpP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00444">
        <property type="entry name" value="ClpP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001907">
        <property type="entry name" value="ClpP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023562">
        <property type="entry name" value="ClpP/TepA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018215">
        <property type="entry name" value="ClpP_Ser_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10381">
        <property type="entry name" value="PTHR10381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00574">
        <property type="entry name" value="CLP_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00127">
        <property type="entry name" value="CLPPROTEASEP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00493">
        <property type="entry name" value="clpP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00381">
        <property type="entry name" value="CLP_PROTEASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0720">Serine protease</keyword>
    <feature type="active site" evidence="3">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58123.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="21640" checksum="BC64EDDE9123B5C8" modified="2015-05-27" version="2">MSLVPMVVEQTNRGERSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLSAEDPEKDINLYINSPGGSVTAGMGIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAPGKRYALTNSEVMIHQPLGGIQGQASDMLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEAEEAKAYGIIDQVLSKPINL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA15</accession>
    <name>E3EA15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">PTS beta-glucoside transporter subunit IIABC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">arbF3</name>
        <name evidence="16" type="ORF">PPSC2_19635</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372720.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4198"/>
    <dbReference type="EnsemblBacteria" id="ADO58148">
        <property type="protein sequence ID" value="ADO58148"/>
        <property type="gene ID" value="PPSC2_19635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4187"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_2_1_9"/>
    <dbReference type="OMA" id="YACISGG"/>
    <dbReference type="OrthoDB" id="328780at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036878">
        <property type="entry name" value="Glu_permease_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018113">
        <property type="entry name" value="PTrfase_EIIB_Cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001127">
        <property type="entry name" value="PTS_EIIA_1_perm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011297">
        <property type="entry name" value="PTS_IIABC_b_glu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001996">
        <property type="entry name" value="PTS_IIB_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00358">
        <property type="entry name" value="PTS_EIIA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00367">
        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55604">
        <property type="entry name" value="SSF55604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00826">
        <property type="entry name" value="EIIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00830">
        <property type="entry name" value="PTBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01995">
        <property type="entry name" value="PTS-II-ABC-beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51093">
        <property type="entry name" value="PTS_EIIA_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00371">
        <property type="entry name" value="PTS_EIIA_TYPE_1_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51098">
        <property type="entry name" value="PTS_EIIB_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01035">
        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="116"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="145"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="201"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="245"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="287"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="326"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="383"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="422"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="14">
        <location>
            <begin position="4"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="15">
        <location>
            <begin position="107"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-1" evidence="13">
        <location>
            <begin position="488"/>
            <end position="592"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO58148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="618" mass="65842" checksum="C9E2377DC4AC03A6" modified="2011-01-11" version="1">MSDKELSKKIVTLVGGEENVNSVFHCATRLRFKLKDRTKADKAALEATPGVITVVESSGQFQVVIGNNVGQVFEHMMAETNLQDADNPNAKKEESSEKTNFLGKAVDIISSIFSPLLGALAGAGLLKGIMALIASLHWIDTASGTYLILNAASDSVFYFLPIFLAITSSRKFKTNAFVSVAVAGALVYPDVIAAVDNPAKLAFLGIPIILIKYSSSVIPIILAVWVQSYVERWFNSFVHQSVKNIIVPMLSLLVVVPLTFLAFGPVGNLISQGLANGFTWVYNLSPLIAGAVAGAFWQVFVIFGVHWGFVPIMLSNIQTLGYDTMLPMLTAAVLSQAGATLGVFLKSRNTQMKALAGSSTLAAVFGITEPTIYGVTLKLKKPFIYACISGGIGGAIIASGGATAKSFSLPSLLALPTYFGAGFLWVVLGLLVAFVLAVVLVMILGFDDPKEEAVKTETAPVKKEVTIEKEILVSPLQGKVLPLEQSSDVAFASGAMGKGILIDPTEGVLTSPVNGTITTVFPTGHAIGITSNDGAEILIHVGVNTVKLKGQFFDKRVKEGDVVKQGQLLLEFDIEQIKAAGYTTTTPIIVTNSAQYLDVLNTMETEVKREDYLLTVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA99</accession>
    <name>E3EA99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">PTS beta-glucoside transporter subunit IIABC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">bglP11</name>
        <name evidence="16" type="ORF">PPSC2_20745</name>
    </gene>
    <organism evidence="16 17">
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<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
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    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="658" mass="74569" checksum="A63239A646667CFD" modified="2011-01-11" version="1">MLDKIKEFASTFFVTGDPMIYGADVSIALATIGIVFVLTYFKKWGWLWKNWLTTVDHKKVGIMYILAAILMLFRGGVDALLMRIQLATPDVTLLHPEHYNQIFTTHGTIMILFMAMPLMFGLFNIAVPLQIGARDVAFPFLNALSFWLFFMGAMLFNLSFVIGGSPDAGWLSYPPLSELQFSPGVGQNFYIWGIQISGIGSLATGINFIVTIIKMRAPGMTWMKMPVFTWSVFSSCVIIIFAFPILTVTLALLFLDRFGGGHFFTLDFGGNPMMYINLIWMWGHPEVYIVVLPAFGIYSEVISVFSKKKLFGYKSMVYAMFIIAILSFFTWAHHFFTMGSGADVNAFFAISTMVIAIPTGVKVFNWLFTMYRGKLEFKTPMMWSIAFIPNFLIAGLTGVMLSVAPADFQFHNSYFLIAHFHSALIGGVVFGYLAGLYYWWPKMFGFTLPETPGKWAFWFWNIGFYVCFIPQYSLGLMGMTRRLSTYGWDTGWQPLNMVSTVGAFLMGIGFLFQVLQILLGIKNYRKLKDTTGDPWGGHTLEWSIPSPAPEYNFATIPQVEERDDWWAEKDKRAKGIFRKQPPIEAIHMPKNSAIPFIMSVFFFIAGFGFVFGWSFFYIPGLIGVAICMICRSFFSYDGDYYIPADEVKRTEAAIRGSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAF2</accession>
    <name>E3EAF2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">resE7</name>
        <name evidence="10" type="ORF">PPSC2_21675</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373137.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4622"/>
    <dbReference type="EnsemblBacteria" id="ADO58570">
        <property type="protein sequence ID" value="ADO58570"/>
        <property type="gene ID" value="PPSC2_21675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4608"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_3_9"/>
    <dbReference type="OMA" id="YDLFCRI"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="93"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="33679" checksum="57B8F63A04976652" modified="2011-01-11" version="1">MTTLLYICIGIAVAAVCTAVVAIMLYRRSIQRTMKTIENMLDAAINGSFSEDVFDESVLSAIEAKFAKFLSICSVSSKNLLAEKNKINELISDISHQTKTPVANILLYSQLLSEYELSQDTSTCVKALSAQAEKLNFLIQTLLKTSRLETGIITVAPRRESVQKLLDAALEQMMPKADAKGISVVMEDTVTHAYFDLKWTSEAVYNIMDNAIKYTETGGSMNIKVTAYDLFCRIDIIDSGIGIAEEEQGKIFTRFYRSPTVNSQEGVGIGLFLAREIIAAEGGYIKVRSRYGRGSTFSIFLSMDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAH8</accession>
    <name>E3EAH8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Phosphate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">phnE</name>
        <name evidence="8" type="ORF">PPSC2_21790</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58596.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324733.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08925"/>
    <dbReference type="EnsemblBacteria" id="ADO58596">
        <property type="protein sequence ID" value="ADO58596"/>
        <property type="gene ID" value="PPSC2_21790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4636"/>
    <dbReference type="eggNOG" id="COG3639">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064254_1_2_9"/>
    <dbReference type="OrthoDB" id="1209768at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005769">
        <property type="entry name" value="PhnE/PtxC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01097">
        <property type="entry name" value="PhnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="135"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="228"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="258"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="93"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="6">
        <location>
            <begin position="15"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58596.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="30725" checksum="549C3BA7C51CC20A" modified="2015-05-27" version="2">MKPDSTVQPLSSTQPSPSAGPPQPSKPPAGPPLPGRYKRYATWMIFIVVLVACSIHTDATPYQLIVGLPEMGKLLEEMFPPDWSYLPTIWKPMLETIQIAIVGTTLGAILAIPVALLCAYNVMPRKLISLPMRTILNLVRTIPDLLFASIFVAVFGIGPFAGMLALLFFSFGIIAKLTFEAIEAIDPGPLEAMTAVGASRIQVIAFGVVPQALPYFVSYLLYTFEVNVRAASVLGLVGAGGIGLLLDRSLGLFRYDRASIIILLTLVIVLAIDYGSNLLRRKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAI0</accession>
    <name>E3EAI0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ycbU</name>
        <name evidence="5" type="ORF">PPSC2_21800</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373165.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08935"/>
    <dbReference type="EnsemblBacteria" id="ADO58598">
        <property type="protein sequence ID" value="ADO58598"/>
        <property type="gene ID" value="PPSC2_21800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4638"/>
    <dbReference type="eggNOG" id="COG0520">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003433_2_1_9"/>
    <dbReference type="OMA" id="RVSPHIY"/>
    <dbReference type="OrthoDB" id="1474443at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="4">
        <location>
            <begin position="53"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="376" mass="41465" checksum="BBCEEBC3756FC33A" modified="2011-01-11" version="1">MKHPFQSYRQLFPVLSSHIHVGSCSQGAISRPVSAAIEEYHRSLLQHGLNGDLSMARLEEARGHFAKLIGAEPDEIAVMSSASEAIAGVATALPYVPGKEGIVYADTDFPTVGHIWQAQEMFRDHICCIPSTEGEVTIEQYEEHVTENTALIMVSHVNYTNGFQQDLKSIAHIAHRNQALLFVDAYQSAGMIPVDVKAMGIDILVAGARKYMLGIPGVAFLYISKDRVERFKPRLTGWLGQEPASRFDIAHPVPAAGTRRFETGLPSFISIFAANAALKLLLEIGVMNIQTYMNELLDFSVEYGRSKGLHIRIPDRGGTLPSLLAVEVADVSAVERRLRSRNMIVSARKDIIRVAPHFYNTAEEVRRVIDELAGSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAM6</accession>
    <name>E3EAM6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Flagellar motor protein MotA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">motA3</name>
        <name evidence="10" type="ORF">PPSC2_22755</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the exbB/tolQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373323.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10270"/>
    <dbReference type="EnsemblBacteria" id="ADO58784">
        <property type="protein sequence ID" value="ADO58784"/>
        <property type="gene ID" value="PPSC2_22755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4818"/>
    <dbReference type="eggNOG" id="COG1291">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079895_0_0_9"/>
    <dbReference type="OMA" id="ANLIWLN"/>
    <dbReference type="OrthoDB" id="897037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002898">
        <property type="entry name" value="MotA_ExbB_proton_chnl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01618">
        <property type="entry name" value="MotA_ExbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0966">Cell projection</keyword>
    <keyword evidence="10" id="KW-0969">Cilium</keyword>
    <keyword evidence="10" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="5"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="182"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="MotA_ExbB" evidence="9">
        <location>
            <begin position="104"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="251"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="29776" checksum="08C6C7A28288C486" modified="2011-01-11" version="1">MDITIVLGIIAGIIALIGGFLWEGGEFSGLLQGTSALIVFGGTFAAVVISYPASKLKTIPTALRMAFSREDNPTEQYIEDLVSMAATSRRSGVLALERISSEHPNAFLREGLQLVIDGTEQEQIKQILELELDAIEHKHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSLTEPTALGPSIAVAFIATLYGVASANLIFLPIASKIRAASESEIITMDLLLQGILAIQNGENPKLVRKKLEFFIRSEQNIDRKPPRRSRTESATPKEDFHESAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAS2</accession>
    <name>E3EAS2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Precorrin-8X methylmutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cbiC</name>
        <name evidence="6" type="ORF">PPSC2_23680</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CobH/CbiC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373522.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11185"/>
    <dbReference type="EnsemblBacteria" id="ADO58986">
        <property type="protein sequence ID" value="ADO58986"/>
        <property type="gene ID" value="PPSC2_23680"/>
    </dbReference>
    <dbReference type="GeneID" id="66575335"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5012"/>
    <dbReference type="eggNOG" id="COG2082">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084703_1_1_9"/>
    <dbReference type="OMA" id="GAPIFCD"/>
    <dbReference type="OrthoDB" id="1812068at2"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016993">
        <property type="term" value="F:precorrin-8X methylmutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003722">
        <property type="entry name" value="Cbl_synth_CobH/CbiC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036588">
        <property type="entry name" value="CobH/CbiC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02570">
        <property type="entry name" value="CbiC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63965">
        <property type="entry name" value="SSF63965"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiC" evidence="5">
        <location>
            <begin position="16"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="214" mass="23066" checksum="BBE80A374B18B212" modified="2011-01-11" version="1">MDFKTDFKPLTVQPQEIEGKSFAMITEELGEHPFTAEQYPVVQRVIHASADFELGRSMVFHPKAIEAGIAAIRAGQPVVADVQMIQAGLSKDRIRQFGGDVHVYISDPDVMEEAKRLNTTRAIISMRKAIQAGEGGIYAIGNAPTALLELIRLVKEGAAKPGLVIGMPVGFVSAAESKDELRKLDIPFITNIGRKGGSTIVVAALNAISLMAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAS3</accession>
    <name>E3EAS3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Precorrin-6x reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cbiJ</name>
        <name evidence="4" type="ORF">PPSC2_23685</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373523.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11190"/>
    <dbReference type="EnsemblBacteria" id="ADO58987">
        <property type="protein sequence ID" value="ADO58987"/>
        <property type="gene ID" value="PPSC2_23685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5013"/>
    <dbReference type="eggNOG" id="COG2099">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068627_0_0_9"/>
    <dbReference type="OMA" id="THPYAAQ"/>
    <dbReference type="OrthoDB" id="1726104at2"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016994">
        <property type="term" value="F:precorrin-6A reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003723">
        <property type="entry name" value="Precorrin-6x_reduct"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36925">
        <property type="entry name" value="PTHR36925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02571">
        <property type="entry name" value="CbiJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00715">
        <property type="entry name" value="precor6x_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51014">
        <property type="entry name" value="COBK_CBIJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="28179" checksum="CB0B2874F2A972A7" modified="2011-01-11" version="1">MIFMLCGTSDARELALQIRDIGFNVLTSVVTESAAASLSEAGLDVRTGRMTADEMGAMIREKGIQAVVDASHPFAEEAHANAMAAARESGVPYIRYERTGLVYDNHPLLHIVPSYEEAALEAKQLKGSVMLTTGSKTLGTFTKHLLGDPEIRLVARMLPRLDNMEKCGELGMEQKNIIAMQGPFSRELNEALYKHFGTTVMVTKESGRTGAVDEKVQSALDLGIHVILISRPEVEFGTVFDHFDGVIDALRTATGKISI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB33</accession>
    <name>E3EB33_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydeQ</name>
        <name evidence="2" type="ORF">PPSC2_25145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373846.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5376"/>
    <dbReference type="EnsemblBacteria" id="ADO59313">
        <property type="protein sequence ID" value="ADO59313"/>
        <property type="gene ID" value="PPSC2_25145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5329"/>
    <dbReference type="eggNOG" id="COG2249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058643_0_2_9"/>
    <dbReference type="OMA" id="QFPFSWY"/>
    <dbReference type="OrthoDB" id="1143659at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="21018" checksum="EF0155BD757FEF69" modified="2011-01-11" version="1">MKILIIVAHPNLQSSRMNRAWTEVMRQQPETTVHVLYEAYPDQQINVSREQALLDSHDRIIFQYPLYWYSTPPLLKQWFDEVLAFGWAFGPDGEHLKGKEIGIAISTAGTAASYQPGGYNLFTIRDIAKPMEALANYVSAHYLPPFAIHNANHVTGEQITASQAAYVQHLATVRHVQTSDLITINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB43</accession>
    <name>E3EB43_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Penicillin-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_25195</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59323.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324921.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5387"/>
    <dbReference type="EnsemblBacteria" id="ADO59323">
        <property type="protein sequence ID" value="ADO59323"/>
        <property type="gene ID" value="PPSC2_25195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5340"/>
    <dbReference type="eggNOG" id="COG1680">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022757_0_0_9"/>
    <dbReference type="OrthoDB" id="537440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168769" evidence="1">
        <location>
            <begin position="24"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="496"/>
            <end position="601"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59323.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="664" mass="73888" checksum="C4932334F4E860D5" modified="2015-05-27" version="2">MEKMIYTILAVLLLSTTITTACMAPNGASVAAPVNIPVASEKASLEGPRDAKELEAFADGVFANKMKKFNTVGSNFVVVAGGKVILSKGYGYADKGKKIPVDKNTVFQIGSVTKSFTALAAMQLVDKGKMDLKHDIQEYLGGIKVPNKTGKKLTMFDLLTYSSGFDEPDILMEMHPEYADKYFPMKKYIASNMPTVVRPPGEAYTYDNFGFMLAGYAVANVTGMSYSKYMEKNIFKPLGMNSTSVRFTPQLLSRMAAHYGPTGELIPLDGFKPTEKPEGGIVSTADDMAKYLIMHLNKGKYKGKEVVSPKSIEQMHTYQLFPDKEFPVTTIGFEGYFKEKMNNQHVILKGGNVTGHSSLIVILPEKNTAMYMSYNNDSMMSLDVYEEFMNHYYPRKSEVPKSTYATLSEQQAQDYVGLYQNTRIAALRTKVSYSDGKLIMETGTSGKHTLKMIHPLLFEDESGNKLTFNKNEAGHIAYLYYMQLPDLVAYAQKVNIDSPFSDVPADSKYISYINNLNALEVMSGKSANLFDPKGTMTQGEFSEVLLRAHGWYKQPFMIEPNKKQMMAGLRNYQPNSPITRQMAAVMIQNLKQVEPGIKVKLSGETDAWAVKAVTALVSQGIMDPNTKINVDGSIDFRSKQLLKRQEASALLDQAFNYYTLPISH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB61</accession>
    <name>E3EB61_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373874.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12765"/>
    <dbReference type="EnsemblBacteria" id="ADO59341">
        <property type="protein sequence ID" value="ADO59341"/>
        <property type="gene ID" value="PPSC2_25270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5358"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_0_0_9"/>
    <dbReference type="OMA" id="ELGWMED"/>
    <dbReference type="OrthoDB" id="762207at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="32289" checksum="D8F7F4B1AB4CDE04" modified="2011-01-11" version="1">METSILKSLKPDIIVEMLGMAVAFENWKKVMETAGILYQCVQRIYEERQYHKAMKLPIPLVNLERPLVYYFGLSHLMCGMAHQHQGAYEQARECIYKYAELGWMEDLEEEDNQVVEEFRFLAKTNLYAVNILSGNIELIEEYVAFLQDNLEEILPGLNTILQAALMYHLDVGDILHTFAEQIDEFGSYEDAENISYYYSYCYHLALYYRKCGRLQDAVGLTVRAMQLVDQPGNDRNFKRCTALFESIRESATAEQISQYRQMLMQCLDEYETDSNSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB64</accession>
    <name>E3EB64_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Damage-inducible protein DinB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DinB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373877.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12780"/>
    <dbReference type="EnsemblBacteria" id="ADO59344">
        <property type="protein sequence ID" value="ADO59344"/>
        <property type="gene ID" value="PPSC2_25285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5361"/>
    <dbReference type="eggNOG" id="COG2318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_138368_0_0_9"/>
    <dbReference type="OMA" id="GHEVSFF"/>
    <dbReference type="OrthoDB" id="2047691at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007837">
        <property type="entry name" value="DinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05163">
        <property type="entry name" value="DinB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18930" checksum="1E039F4660C9B6D4" modified="2011-01-11" version="1">MSGTLQVRDHLLNELETGVRTGEALIRKIRPEDWSFRPQDNFRSLLELVHHFVLIPASDLAIMQEKSEAEVGSIENSLSGMEDPERLAATFRQNFEAYKAYILSLSEDDYLNRSTKAFYMEHGHLQVQWQIETVTHVFHHRSLIYNYLKQLGHEVSFFMLYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBV1</accession>
    <name>E3EBV1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">glnR3</name>
        <name evidence="5" type="ORF">PPSC2_24085</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373610.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11590"/>
    <dbReference type="EnsemblBacteria" id="ADO59075">
        <property type="protein sequence ID" value="ADO59075"/>
        <property type="gene ID" value="PPSC2_24085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5098"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2909">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062177_0_0_9"/>
    <dbReference type="OMA" id="VDDHIYR"/>
    <dbReference type="OrthoDB" id="1287053at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="44486" checksum="C66F3C0696F72066" modified="2011-01-11" version="1">MIRLQFDADGYSVVYNADRVMLLAKEFALLRFLYDNRNQVFTREQLLDCVWPLEYPVERTVDDHIYRLRKKLKAWTGLRIHTVRGYGYSLTLTDVQQQNHPSLHDQEVQDAVHGLFRKYQLLGQGNSIVALAAQQEQMGFQMSSFYQMYTRFVQADVAWFLKQEDFAPADRLYWMLLLYTGTAGVTDEGLALCERALVSGLLSSDQERELRILNILEAYVENGQPERAQEGLPLTLMVMERDDLDKFVMPVALMEMYMHLVANHMEKAAELSDRLEGMLSKAPYLRELGRYRMMRGLMLLRTGDVDNAERLMDEGLVTLDMAKQELLKIKAVCQIRGFLKLCGSYPMLEEKYAAQYNRLDRDNNLTLHRPALRRWLEQILSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBZ2</accession>
    <name>E3EBZ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Restriction endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_24265</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373651.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11785"/>
    <dbReference type="EnsemblBacteria" id="ADO59116">
        <property type="protein sequence ID" value="ADO59116"/>
        <property type="gene ID" value="PPSC2_24265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5138"/>
    <dbReference type="eggNOG" id="COG1403">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1022487_0_0_9"/>
    <dbReference type="OMA" id="YSNKEFR"/>
    <dbReference type="OrthoDB" id="1843957at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029471">
        <property type="entry name" value="HNH_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14279">
        <property type="entry name" value="HNH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00507">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNHc" evidence="2">
        <location>
            <begin position="190"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="26"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="31487" checksum="50221A0EBB21CF84" modified="2011-01-11" version="1">MTDLQQDKDEAREPLMKKCTYCQETKPLTDFQRRTGRRAGPYSRRGPCRSCRGLAPQERVVTSAPSHEETKPLAAPVERHSSVADTAAYRLEASAQPSNDSQRPRRKPVTDKARERHRQRVRHLLSRLKPADTRALRLNRNGMIRLRGKTDQGRRWHQEIELDLAMTLVRERMAVIVNPYTVRRLYSNKEFRQYVLKRDRYTCFFCGGYGDTIDHLLPRAKGGHTTPVNCVCACNECNQVKAARDVEEFIESGVPLPIPNDFEPPDASEDTLRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBZ9</accession>
    <name>E3EBZ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373658.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5185"/>
    <dbReference type="EnsemblBacteria" id="ADO59123">
        <property type="protein sequence ID" value="ADO59123"/>
        <property type="gene ID" value="PPSC2_24300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5145"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_0_0_9"/>
    <dbReference type="OMA" id="NDWDEAN"/>
    <dbReference type="OrthoDB" id="762207at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="291" mass="33924" checksum="DADA32BA869394A5" modified="2011-01-11" version="1">MEEVLNQREAIYLLSDSHALDKACELFRISYTCNDWDEANKVADYLHSLAESLYHTQLRNAADGKYETLNAKHPLVFYYAYSYLAKSIYYQNMGQYEEARDYIMKYSEMGWFMGLDQSGHEEVERFRFLAKANLYTIDLLSGKKELLPEYVQFLHDNDEELLPGLVGIAEAANLNNWDIDDLLNEFADDIEIFEGYEDRANRVYYLKLVNQLAIYQLKKKQYIVALNYILVSLQFSIGVEANTDFRTLVALFETYRDLATLSQQEQYQTILLRGLHNEKGINLDNYGLSVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC31</accession>
    <name>E3EC31_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppB9</name>
        <name evidence="7" type="ORF">PPSC2_25415</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373904.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12910"/>
    <dbReference type="EnsemblBacteria" id="ADO59371">
        <property type="protein sequence ID" value="ADO59371"/>
        <property type="gene ID" value="PPSC2_25415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5386"/>
    <dbReference type="eggNOG" id="COG0601">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036879_1_2_9"/>
    <dbReference type="OMA" id="FADIPVM"/>
    <dbReference type="OrthoDB" id="1479518at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="94"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="187"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="241"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="287"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="95"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="320" mass="36244" checksum="488C6C199E70A0B2" modified="2011-01-11" version="1">MKQYIIRRLLQLIPTLIGISIIVFAISAMVPGDYITAKQNPNMTAEKAQQLRHIYGLDKPEYQRYFIWAGNMLKGNMGDSLQHKQPVTKVISNYVWNSFIIAFFSLIFSWLIAIVAGVFSAKFQYSLFDKFVTLFIFLCMSLPSFFIGLLVIKIFALEWGILPVGGMTTAGVEAGSWDYMVDVLKHMFLPTLVLTMLSTGSLTRYFRTGMLEVIRQDYIRTARAKGLKERTVIFKHALRNALIPAITLLGFELPALFGGAMILEKVFVWPGVGQVYLESISMRDYPFMLGFTIFLAILTLLGNLLSDVLYGMADPRIRLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECA7</accession>
    <name>E3ECA7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">wcaA</name>
        <name evidence="4" type="ORF">PPSC2_01310</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368892.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14030"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54250">
        <property type="protein sequence ID" value="ADO54250"/>
        <property type="gene ID" value="PPSC2_01310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.258"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_810928_0_0_9"/>
    <dbReference type="OMA" id="IFCDADF"/>
    <dbReference type="OrthoDB" id="1445278at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027791">
        <property type="entry name" value="Galactosyl_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02709">
        <property type="entry name" value="Glyco_transf_7C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="6"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_transf_7C" evidence="3">
        <location>
            <begin position="211"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="44453" checksum="0ABAF04FEB9E9F39" modified="2011-01-11" version="1">MAIRYSVIIPTYNRAQQLLLTLASFEAQTYSKQLFEVIVADDGSTDGTKEMVEDFKASYPLIYVSHPEQRGRSAVRNLGLRQAKGIYIIFCDADFLVLPHFIKTVSRYHRKYPKSVLSGIPHSWDDAFTHYHPDFSVEEKEHCRSILTQSGLWNPDFETANEIIPIITPHDVLHQTGALPKVVSPTRVPPSTQKQFASTDVAPWMMLVTRCVAIRRNHLIRIGGFNERFVLYGLEDWDLGYRLHRLKIPFYCIKELVGYHQEHPTHLRGNVLNTENLRIMYETYGFNDSSLNLFALIPPSEDFETYKNTLRVLRRGLRSRLTRSSAMLLRRTLRIAAKQFYYHNNTPAYQQSLRAIKKKAENRKSRVAHVLREMLVKSEKLLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECF7</accession>
    <name>E3ECF7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ycbB1</name>
        <name evidence="3" type="ORF">PPSC2_01560</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368942.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14255"/>
    <dbReference type="EnsemblBacteria" id="ADO54300">
        <property type="protein sequence ID" value="ADO54300"/>
        <property type="gene ID" value="PPSC2_01560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.310"/>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_080651_0_0_9"/>
    <dbReference type="OMA" id="EKPQMRS"/>
    <dbReference type="OrthoDB" id="930905at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013972">
        <property type="entry name" value="YcbB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08664">
        <property type="entry name" value="YcbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="2"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="34953" checksum="042B5A51AE822752" modified="2011-01-11" version="1">MRFYIVDDDQGIRSMLADIIEDEGLGEVVGEAEDGSYVNSSLLELNRIDVLLIDLLMPLRDGIQTVRALGDQFSGKIIMISRIESKNMIGEAYSLGIEYYIAKPLNRLEIIAVIQKVTERLRMQQSITDIQRTLQGLSMFTSNSPSATLEPTRNIVSSGQFLLSEMGMIGEAGSVDLLDMLEYLEQYEEETGNLSPYLFPSLKDIFANIASKRLGDSASAIELSKEIKASEQRVRRAIFQTLSHIVSLGLTDYTHPKFENYASKFFDFTEIRKKMLELQNNVEPSLSQARINTKKFVQVLYMEAKRLLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECV0</accession>
    <name>E3ECV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidase S51</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">M1-966</name>
        <name evidence="4" type="ORF">PPSC2_04140</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S51 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369454.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0836"/>
    <dbReference type="EnsemblBacteria" id="ADO54819">
        <property type="protein sequence ID" value="ADO54819"/>
        <property type="gene ID" value="PPSC2_04140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.825"/>
    <dbReference type="eggNOG" id="COG3340">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090997_0_0_9"/>
    <dbReference type="OMA" id="DFYVLPH"/>
    <dbReference type="OrthoDB" id="1485646at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005320">
        <property type="entry name" value="Peptidase_S51"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03575">
        <property type="entry name" value="Peptidase_S51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0720">Serine protease</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="205" mass="22797" checksum="81A18B6AD3597B36" modified="2011-01-11" version="1">MRKLFLSSSFKDVAPCLVHFADENLEGKTVTFIPTASIPEKVKFYVNTGKKALEDLGLVVDEIEISTATLNEIESKIRENDYIYITGGNTFYLLQELRRSGADKIIAEEVNAGKLYIGESAGSMILSPNIEYVRLMDNVQEAPALDSFAALGIIEFYPVPHHTNIPFKKAVENIIEEYGSQLNLYPISNAEFILVEGDSIKVENA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECW3</accession>
    <name>E3ECW3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">N5-carboxyaminoimidazole ribonucleotide mutase</fullName>
            <shortName evidence="3 4">N5-CAIR mutase</shortName>
            <ecNumber evidence="3 4">5.4.99.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5-(carboxyamino)imidazole ribonucleotide mutase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 7" type="primary">purE</name>
        <name evidence="7" type="ORF">PPSC2_04205</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole + H(+) = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate</text>
            <dbReference type="Rhea" id="RHEA:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58730"/>
            <dbReference type="ChEBI" id="CHEBI:77657"/>
            <dbReference type="EC" id="5.4.99.18"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate from 5-amino-1-(5-phospho-D-ribosyl)imidazole (N5-CAIR route): step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the AIR carboxylase family. Class I subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.18" evidence="3 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369467.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17025"/>
    <dbReference type="EnsemblBacteria" id="ADO54832">
        <property type="protein sequence ID" value="ADO54832"/>
        <property type="gene ID" value="PPSC2_04205"/>
    </dbReference>
    <dbReference type="GeneID" id="66574135"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.837"/>
    <dbReference type="eggNOG" id="COG0041">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094982_2_2_9"/>
    <dbReference type="OMA" id="SNSIDGW"/>
    <dbReference type="OrthoDB" id="1701464at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034023">
        <property type="term" value="F:5-(carboxyamino)imidazole ribonucleotide mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01929">
        <property type="entry name" value="PurE_classI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033747">
        <property type="entry name" value="PurE_ClassI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000031">
        <property type="entry name" value="PurE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024694">
        <property type="entry name" value="PurE_prokaryotes"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00731">
        <property type="entry name" value="AIRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001338">
        <property type="entry name" value="AIR_carboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01001">
        <property type="entry name" value="AIRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01162">
        <property type="entry name" value="purE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1 3 4" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRC" evidence="6">
        <location>
            <begin position="3"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR001338"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001338-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="161" mass="16718" checksum="4967E58A7864DCEC" modified="2011-01-11" version="1">MSVQVAVIMGSTSDWDTMQHACAVLDELEIGYEKKVVSAHRTPDLMFRFAEEAAGRGLKVIIAGAGGAAHLPGMVAAKTSLPVIGVPVQSKALNGLDSLLSIVQMPGGIPVATVAIGKAGSTNAGLLAAQILGAFDEKISQRVVARRDRIRDEVLEGSDSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED25</accession>
    <name>E3ED25_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Alanine racemase</fullName>
            <ecNumber evidence="3">5.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">alr</name>
        <name evidence="7" type="ORF">PPSC2_06305</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>L-alanine = D-alanine</text>
            <dbReference type="Rhea" id="RHEA:20249"/>
            <dbReference type="ChEBI" id="CHEBI:57416"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="EC" id="5.1.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 3 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the alanine racemase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369924.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19250"/>
    <dbReference type="EnsemblBacteria" id="ADO55293">
        <property type="protein sequence ID" value="ADO55293"/>
        <property type="gene ID" value="PPSC2_06305"/>
    </dbReference>
    <dbReference type="GeneID" id="66573679"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1303"/>
    <dbReference type="eggNOG" id="COG0787">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028393_2_2_9"/>
    <dbReference type="OMA" id="HMTHFSD"/>
    <dbReference type="OrthoDB" id="859043at2"/>
    <dbReference type="UniPathway" id="UPA00042">
        <property type="reaction ID" value="UER00497"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008784">
        <property type="term" value="F:alanine racemase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030632">
        <property type="term" value="P:D-alanine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01201">
        <property type="entry name" value="Ala_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000821">
        <property type="entry name" value="Ala_racemase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011079">
        <property type="entry name" value="Ala_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001608">
        <property type="entry name" value="Ala_racemase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020622">
        <property type="entry name" value="Ala_racemase_pyridoxalP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00842">
        <property type="entry name" value="Ala_racemase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01168">
        <property type="entry name" value="Ala_racemase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00992">
        <property type="entry name" value="ALARACEMASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01005">
        <property type="entry name" value="Ala_racemase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="SSF50621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00492">
        <property type="entry name" value="alr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00395">
        <property type="entry name" value="ALANINE_RACEMASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ala_racemase_C" evidence="6">
        <location>
            <begin position="248"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; specific for D-alanine" evidence="3">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; specific for L-alanine" evidence="3">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="138"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="317"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="3 4">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR600821-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR600821-52"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="398" mass="44179" checksum="E3F30C74B74E4C01" modified="2011-01-11" version="1">MQAQYRSTRAEINLDHLGANYEAFRKVLPADKLILVCVKANAYGHGAVEISKEMERLGADYLSVAFLDEALELRHAGIELPILVLGYTSPEAVQTAWEHDISLTVFSEEVLEGIRRLDRQGSERKLKVHIKIDSGMGRLGLLPGEAALAFVRQAHELEQVLLEGMYTHFARADEEDKSYTLLQYDRFRGVADALREQGITIPIIHTGNSAATIDTPSLSPNMVRIGISIYGLYPSDEVNRQVIELLPVLSLKTAVVYTKTLPPGWGVSYGTRYVTSSEERIGTLPIGYADGYSRMLSGKVEVLIRGRRVPVLGTICMDQCMVSLQSFAEDAEEIQTGEEVVLIGQQSGEIIAADELASKLGTIHYEVICMIADRVPRVYMRDHVPVVRVNSLLPTHWN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED51</accession>
    <name>E3ED51_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-560</name>
        <name evidence="3" type="ORF">PPSC2_02200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14965"/>
    <dbReference type="EnsemblBacteria" id="ADO54408">
        <property type="protein sequence ID" value="ADO54408"/>
        <property type="gene ID" value="PPSC2_02200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.417"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_2_9"/>
    <dbReference type="OMA" id="PDVFARW"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="29766" checksum="53AD35A4DA0BE38A" modified="2011-01-11" version="1">MQIKALEEELGMTLFDRAGKKIKMTDAGKLLLQHSAHALKDLQQAKASIEELRTEQRGSLRIGIALPELEESLQEMFAHFHRSFPKISLHICPSFDVTEQLLDNRVDVGITLHSGTDERLVQLPLRTENYCLIVPVNHAFSNRSSLMLDELRHVPWAMQPECHPGRKLIEKCFLDRGYPFATVLETNSIPSILRWVQEGLAVTLQTKSLAAELDRSLFCTVPILRGVPQGQLELIYRSDRYQGEAVKRLIEKIQTVLTECSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE6</accession>
    <name>E3EDE6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yulF</name>
        <name evidence="2" type="ORF">PPSC2_04620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369558.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17515"/>
    <dbReference type="EnsemblBacteria" id="ADO54925">
        <property type="protein sequence ID" value="ADO54925"/>
        <property type="gene ID" value="PPSC2_04620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.928"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_7_0_9"/>
    <dbReference type="OMA" id="FINYCQY"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="333" mass="37394" checksum="85E81A8046CDD6A0" modified="2011-01-11" version="1">MRFGIVGTNWITERFIQAAIETDEFSLTAVYSRTEEKGQAFAAKYNSQPEVFTDLAQMAASDQVDAVYIASPNSLHAEQAILCMNHGKHVLCEKPFASNAAEVQSMIEAARNNDVLLMEAVKSTLMPNFKIIKDHMYKIGRVRRYFASYCQYSSRFDAFKQGKVLNAFNPAFSNGSLMDLGVYCLYPMVALFGKPDEIRAVGVLLSSGVDGEGSIVMKYPDMDAIVMHSKITDSYLPAEIQGEYGTMVIDKISQPYEVKIHYRDGTIEDLTKAQTREPMYYEIQEFIDLIKSGERNSSINSLECSLTVAEVMEEARQQFGLRYEADLKNTSAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDR3</accession>
    <name>E3EDR3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Metallopeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pepQ</name>
        <name evidence="5" type="ORF">PPSC2_06700</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370002.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19665"/>
    <dbReference type="EnsemblBacteria" id="ADO55371">
        <property type="protein sequence ID" value="ADO55371"/>
        <property type="gene ID" value="PPSC2_06700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1379"/>
    <dbReference type="eggNOG" id="COG0006">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017266_4_1_9"/>
    <dbReference type="OMA" id="IHEWPYL"/>
    <dbReference type="OrthoDB" id="415910at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008235">
        <property type="term" value="F:metalloexopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001714">
        <property type="entry name" value="Pept_M24_MAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001131">
        <property type="entry name" value="Peptidase_M24B_aminopep-P_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00599">
        <property type="entry name" value="MAPEPTIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00491">
        <property type="entry name" value="PROLINE_PEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="4">
        <location>
            <begin position="5"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="3">
        <location>
            <begin position="144"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="362" mass="39541" checksum="744584937A18740C" modified="2011-01-11" version="1">MNEKITRLYDELKSQAWDGLLVTDPKHIYYLTGFASDPHERFLGLVLLRDQEPELIVPALDAEAAQAASSVTRISTHTDTDNPYDLLRQRTGTGVKAFALEKEHVSVLRYEQLHTAIGAAQYVDLGPVLQEMRVRKTPEEVQRLKHAARLVEDALRHGLTHVREGVTEVELVAEIEYQMKKLGADGPSFDTTVLSGLKTALPHGVPGTRKLQHGDLLMFDMGVYCDGYASDITRTFAFGKLSTELETIYNTVLRSNEAGIAAIRPGVSCASVDQAARAVVEAAGYGPAFNHRVGHGLGMSVHEYPSVHGGNNDLLHEGFVFTIEPGIYVPGLGGVRIEDDVLVTSEGVEVLTSFPKELTVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE40</accession>
    <name>E3EE40_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">M1-674</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-674</name>
        <name evidence="3" type="ORF">PPSC2_02805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369160.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15620"/>
    <dbReference type="EnsemblBacteria" id="ADO54520">
        <property type="protein sequence ID" value="ADO54520"/>
        <property type="gene ID" value="PPSC2_02805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.531"/>
    <dbReference type="eggNOG" id="COG0265">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_798872_0_0_9"/>
    <dbReference type="OMA" id="WIGETNN"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0720">Serine protease</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="107"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="389" mass="41979" checksum="39D47469C28BD066" modified="2011-01-11" version="1">MMCRLVIGIYIIDYDEKEMHVAVATFYQAFKLKSRIWRTMLKRNGVTGIGVGYADPNRPAKGAAIVLYTLRNLSAVSQTKLQAVTQNISRASAVPIRILGVGSFKREAATPTQTNPRQRWRPVPGAVSVGTTVPTTAGGTGGLIVIKNNTLFILSNAHVLVPTNTSQFHNTIQPSPADGGRTADQIGRAFQFVPLTTTGVNFQDSAIAIANSNSLLNPRYLINQSGGLITVPGHLLSYRLGMTFKRMAKTNGFARGVVEAIGVEQRVRGDSGIKTFRDQTVIRFTQGRTGPGDSGSVWLNDSNDRLNNYAAAVHFAGSTDGTRSVSFPIERAMRTYGTLVAIPAAAGGYKAGVAKGKAPKNNYAYVRPLTRKQRSLSPVITSNTEQEKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE43</accession>
    <name>E3EE43_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">O-acetylhomoserine aminocarboxypropyltransferase</fullName>
            <ecNumber evidence="5">2.5.1.49</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cysD</name>
        <name evidence="5" type="ORF">PPSC2_02820</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the trans-sulfuration enzymes family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.49" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369163.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15635"/>
    <dbReference type="EnsemblBacteria" id="ADO54523">
        <property type="protein sequence ID" value="ADO54523"/>
        <property type="gene ID" value="PPSC2_02820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.534"/>
    <dbReference type="eggNOG" id="COG2873">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018986_4_0_9"/>
    <dbReference type="OMA" id="TYTLFAH"/>
    <dbReference type="OrthoDB" id="637281at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003961">
        <property type="term" value="F:O-acetylhomoserine aminocarboxypropyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006235">
        <property type="entry name" value="OAc-hSer/O-AcSer_sulfhydrylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01326">
        <property type="entry name" value="OAH_OAS_sulfhy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00868">
        <property type="entry name" value="CYS_MET_METAB_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="3">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="430" mass="46237" checksum="6D68F0E2CD78D1F8" modified="2011-01-11" version="1">MSEERKLSFETLAVHAGQEIDPTTFSRAVPLYQTTSYGFRDAEHAADLFSLKEFGNIYTRLMNPTTDVFEQRIAALEGGAGALATASGMAAISFSILNIAGAGDEIVSASSLYGGTYNLFSTTLPKLGIKVHFVDSDDPENFRHAITDKTKAIFAETIGNPQGNVLDVEAVSAIAHEYGIPLIVDNTFPSPYLLRPIEYGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKASGRFPGLTGPDPSYHGVVYTEAVGPIAYIIKARVQLLRDLGAAISPFNSWLLLQGLETLHLRLERHSQNALKVAQYLESHKDVEWVSYAGLPSHPSYELAQKYLPKGQGAILTFGIKGGSQAGSKLIANVKLFSHLANVGDSKSLIIHPASTTHQQLNAEEQVAAGVKPELLRLSVGTEAIDDILYDLEQAITASQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE66</accession>
    <name>E3EE66_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Citrate lyase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_04930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369622.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17825"/>
    <dbReference type="EnsemblBacteria" id="ADO54989">
        <property type="protein sequence ID" value="ADO54989"/>
        <property type="gene ID" value="PPSC2_04930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.993"/>
    <dbReference type="eggNOG" id="COG2301">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062194_0_0_9"/>
    <dbReference type="OMA" id="TGPVWEY"/>
    <dbReference type="OrthoDB" id="1107373at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039480">
        <property type="entry name" value="C-C_Bond_Lyase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15617">
        <property type="entry name" value="C-C_Bond_Lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="395" mass="44832" checksum="7B1FB5F93A2245EB" modified="2011-01-11" version="1">MEFHNRSPKSILAYAIGAALYMPATRLEVAEEIKNGKHEGLTTVILDLEDAIGDQQVGQAEESLAQQLFQLLSYVRTGMMSEQQLPLLFVRVRSVEQLERLLNSLGEALELLTGFVLPKFSSDNGRAYFALIAEYNRTMHTGAGDASRTPVLYGLPILESSKIIYRETRWKELLAIKEILDEVQEYVLNVRIGATDFSSLYGLRRSPDITIYEIAVIRDCIADIINLFGRVDSDYVISGPVWEYFSHRERIFKPQLRVSPFEDAFGKPGRYLRMDFISDAVDGLIREVMMDKENGIIGKTIIHPSHIKPVQAMYAVTHEEYMDALEIVERNDGSLGVFKSTYANKMNEIKPHLNWAYRIINRSKVYGVLHEQQHFVSLLPNHENTSAANSGAVQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EED4</accession>
    <name>E3EED4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA helicase</fullName>
            <ecNumber evidence="3">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">recQ</name>
        <name evidence="12" type="ORF">PPSC2_06760</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the helicase family. RecQ subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370016.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19725"/>
    <dbReference type="EnsemblBacteria" id="ADO55385">
        <property type="protein sequence ID" value="ADO55385"/>
        <property type="gene ID" value="PPSC2_06760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1392"/>
    <dbReference type="eggNOG" id="COG0514">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001103_14_3_9"/>
    <dbReference type="OMA" id="HHDIPKS"/>
    <dbReference type="OrthoDB" id="54580at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043138">
        <property type="term" value="F:3'-5' DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004589">
        <property type="entry name" value="DNA_helicase_ATP-dep_RecQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006293">
        <property type="entry name" value="DNA_helicase_ATP-dep_RecQ_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010997">
        <property type="entry name" value="HRDC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002121">
        <property type="entry name" value="HRDC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044876">
        <property type="entry name" value="HRDC_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032284">
        <property type="entry name" value="RecQ_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018982">
        <property type="entry name" value="RQC_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00570">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16124">
        <property type="entry name" value="RecQ_Zn_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09382">
        <property type="entry name" value="RQC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00341">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00956">
        <property type="entry name" value="RQC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47819">
        <property type="entry name" value="SSF47819"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01389">
        <property type="entry name" value="recQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00614">
        <property type="entry name" value="recQ_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50967">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 12" id="KW-0347">Helicase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="10">
        <location>
            <begin position="32"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="11">
        <location>
            <begin position="221"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="HRDC" evidence="9">
        <location>
            <begin position="537"/>
            <end position="617"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="632" mass="71088" checksum="3BEAF5B66A3F984A" modified="2011-01-11" version="1">MSVQAPTLERAQDLLQKFYGYPDFREGQKKIVASMLEGNDTLGIMPTGGGKSICYQIPALLHEGLTIVVSPLISLMKDQVDALTTMGIAAAYINSTLSGREVNDRIRAARNGDLKLLYVAPERLELDWFRDEMAQLPISCVAVDEAHCVSQWGHDFRTSYLAVAPFVDGLYERPIVAAFTATATPQVMDDIVRLLRLRSPETFVTGLGRPNLAFSVLRGEDKRSFLLNYAREHEGESGIIYAATRKDVDDLYQRLRDAGMAAGRYHAGMTDQERADSQEGFLYDDIRVIVATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGDPSQCILLFGPQDIVTQKFLIEQNPQDEDRKRNDYRKLQQIVDYCYTTRCLRSAQLEYFGEAQEHEACGICSSCTDERELVDMTIDAQKIFSCIHRMRERYGVSMVASVLKGSRNKKVLQYGFDSLPTYGVMGNRTEKEIAEIINVLVSEGYLMLSEGQYPVVRLQQLAAEVLRGQREVMQRVVRHATAFAGGAGSRGRKGRDTYPAAVNETVFEQLRLIRRDLAAQEHVPSYIIFNDATLREMSVASPQSEADMLRIKGVGEVKFRKYGKPFLDFFQNQGNTGGMVSEDEIFADDVYEDFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEW4</accession>
    <name>E3EEW4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">kinE</name>
        <name evidence="14" type="ORF">PPSC2_00505</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54087.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885835.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13510"/>
    <dbReference type="EnsemblBacteria" id="ADO54087">
        <property type="protein sequence ID" value="ADO54087"/>
        <property type="gene ID" value="PPSC2_00505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.98"/>
    <dbReference type="eggNOG" id="COG5000">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027927_0_0_9"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 14" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="328"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="13">
        <location>
            <begin position="351"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="11">
        <location>
            <begin position="415"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="12">
        <location>
            <begin position="487"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="552"/>
            <end position="756"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO54087.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="758" mass="85816" checksum="AB26E4ADD2C2F90A" modified="2015-05-27" version="2">MSIKIRITIILSGSVLFILLLNIALNYYTTHENLRSDSETKMVLTAKIIGGAIEQTRHSWEAVDKQLGYNLWLSATLAANQLDPDIRNIQQEQLQQIATLHRDINISLMIRDGQGYKVVKSSNPKELTSSDPLMGYWKNAVDQLYEHGQVAMAHGQNLDHFWTSSFDYTDSASSHINKWGFYYDQKRNYLIRVSFQDTSVQDFIPILSPAEIVKQTQQVDYRILEITGINPATFGGATMDKNGNDRKHYYMYNEPIQFGTYQLTRMPEDRLAVSRAILSGESIVQDCYIKGERVLVSYIPFYPTNRDAYVIRIVMNYDTIASVISKQLISLVAISIVLLEVVIIGSYVLASLFVRPIQSILGKVNEMADGHFDTRLEIKGGHELARLGERINAMAYNLGMYTRRLEQMYEENRSVKEHLESVINQTADAIHVTDQEDRVIRVNHAFEALYGWTKKELVGRKLEFVPPQQQEEYEFQKESLLQGESIVSSETLRMRKDGSTVEISMSTSPILDEQGEILGFICVSRDITGRNRMEELLRRSEKLTTVGQLAAGVAHEIRNPLTTLRGFLQLQQQNQVLNMKHNDIMMSELDRINLIVSEFLILAKPQAVHFQKKDVRYIVSDVISLLDSQAHLLGIVFNLQVTDEPALVYAEENQLKQVFINLLKNSMEAMSKGGIITIHLFLEGESVKIFIRDQGTGIPAEMLSKLGEPFVTNKETGTGLGLMVSQRIIQSHKGTLDIESTEGEGTTALVQLPIAKPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFB9</accession>
    <name>E3EFB9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369715.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1100"/>
    <dbReference type="EnsemblBacteria" id="ADO55082">
        <property type="protein sequence ID" value="ADO55082"/>
        <property type="gene ID" value="PPSC2_05350"/>
    </dbReference>
    <dbReference type="GeneID" id="66573880"/>
    <dbReference type="KEGG" id="ppm:PPSC2_05350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1085"/>
    <dbReference type="HOGENOM" id="CLU_189149_0_1_9"/>
    <dbReference type="OMA" id="HGFNHAS"/>
    <dbReference type="OrthoDB" id="2088478at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043937">
        <property type="term" value="P:regulation of sporulation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018540">
        <property type="entry name" value="Spo0E-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037208">
        <property type="entry name" value="Spo0E-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09388">
        <property type="entry name" value="SpoOE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140500">
        <property type="entry name" value="SSF140500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="7039" checksum="999F712B8BCE680E" modified="2011-01-11" version="1">MIRDDILRQQLENARQKLYILQAKHGFNHASVLKQSVIMDNLINQYNHLFYIKEKKPTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFC6</accession>
    <name>E3EFC6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">kinB1</name>
        <name evidence="12" type="ORF">PPSC2_05385</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369722.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18305"/>
    <dbReference type="EnsemblBacteria" id="ADO55089">
        <property type="protein sequence ID" value="ADO55089"/>
        <property type="gene ID" value="PPSC2_05385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1092"/>
    <dbReference type="eggNOG" id="COG4191">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_428853_0_0_9"/>
    <dbReference type="OMA" id="MFNNELQ"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168180" description="Histidine kinase" evidence="10">
        <location>
            <begin position="28"/>
            <end position="629"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="182"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="210"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="302"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="337"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="372"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="11">
        <location>
            <begin position="425"/>
            <end position="629"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="389"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="629" mass="71616" checksum="2E86935B1BAAC257" modified="2011-01-11" version="1">MRHVPKAVAALLAVIVILLSLDHIGYAAKMTPEREYKIPSWDMRWGAEDEDGSLDEVTDHSKVWMHIEDDTQLLKQPGNRGTAWIRIKLPSLNDETPAVLFENIYGRHITLYKDGTNFYESYRGYNYENNRILIPLKPEDSGKTLYIWTESSKNRLGIIGNVMTGDYRDLLGNLVRMDVLDIVLGSTFIFIALVLLICSFFLFRPSMAMWLSLSAIVLSIGLMIVTYSPFLYTFYRGYGKLYLQLFDVALFILLPSLAFFFEQNINSILLIRKFRKLLTAYSLFCFIIMIVNLGAQERLNDVYYFFSVIVLGILLVALMVLLVFASIRMALKGDHEAIILSTGFAFFAVITIAELSWFFIRDGHYNMFLWKWGVFGFVLALIAILGRRLAEKHKQVVRYSRELEMFNNELQRSEKMEIISDLAASVAHEVRNPLQVTRGFLQLMSKQEDGKNKDYLHIALEELDRASAIITDFLTFAKPEFDHTKTLTILDEFKHIEGIISPMANLQGGKISLDIPQEIKVRGNSSKFKQAFINIIKNSIEALREQGHIHIWAYVDNGEAVIHIRDNGEGMDAQTLSRLGEPYFSNKTKGTGLGMMVTFRIIETMNGKISFTSAKGVGTEATIRFPVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFM4</accession>
    <name>E3EFM4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">avtA</name>
        <name evidence="3" type="ORF">PPSC2_07360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370142.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20340"/>
    <dbReference type="EnsemblBacteria" id="ADO55515">
        <property type="protein sequence ID" value="ADO55515"/>
        <property type="gene ID" value="PPSC2_07360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1521"/>
    <dbReference type="eggNOG" id="COG1167">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_0_6_9"/>
    <dbReference type="OMA" id="EGHYRKH"/>
    <dbReference type="OrthoDB" id="1024978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="47"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="46348" checksum="73A062C221FF4060" modified="2011-01-11" version="1">MQYSFASRTAAMLASPVRHIRENARKHSFISLAEELPAQELFPVKLLEEAAHDVFGSGPDALQYGEPEGYFPLRAWLAGEWEQRKGVRVPPGQILLTTGSQQAIDLIVRLMVDERDPVLVENPTSPGCLQVLSMQGAQVVPVESDGEGVIPDKLEALMIRYRPKLFFATPTFTNPTGSLWSAARRQEILDLCRRHEVLVVEDDSYGELHFKTKHETHDKSPHAQSRKFAEAYPSLFALDHAGQGGQVLYIGSFNKTVAPALRTGWAAGPAPLIEGMYALKQLADVQSSTMNQRLLFQLLTNSRFQWHEHLAMLNKEYSTRLQLLLELLKRPFWKDVTYHIPSGGMYVWVKLPAGLDSALLLKAALPKGVAFMPGALCAVGDEGASHIRLNFSHPGREQLLMGMNLIGETIGEFTARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT4</accession>
    <name>E3EFT4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370425.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1834"/>
    <dbReference type="EnsemblBacteria" id="ADO55806">
        <property type="protein sequence ID" value="ADO55806"/>
        <property type="gene ID" value="PPSC2_08660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1824"/>
    <dbReference type="eggNOG" id="ENOG5032EHB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1684851_0_0_9"/>
    <dbReference type="OMA" id="NEQDEYI"/>
    <dbReference type="OrthoDB" id="1420738at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="18777" checksum="88A8161C1713F509" modified="2011-01-11" version="1">MSRYETRLEDYRRRERPSYRVFEGMQELVCSVGQLHNNWLYVNVDQWDQDPVHTPIYYLDEHWLEECAEDGTAATNEQDEYIPLWISDRQVQTWFELATFESVVEVLKAAGKPVTLQMVIVAVKYYDKRDAYLDYDEVKAVTDLWFVLTKVRNHLTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFW4</accession>
    <name>E3EFW4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stress responsive protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309679.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21255"/>
    <dbReference type="EnsemblBacteria" id="ADO55836">
        <property type="protein sequence ID" value="ADO55836"/>
        <property type="gene ID" value="PPSC2_08795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1854"/>
    <dbReference type="eggNOG" id="ENOG5032YE5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_080664_3_1_9"/>
    <dbReference type="OMA" id="KFENNYD"/>
    <dbReference type="OrthoDB" id="1584631at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013097">
        <property type="entry name" value="Dabb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07876">
        <property type="entry name" value="Dabb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00886">
        <property type="entry name" value="Dabb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51502">
        <property type="entry name" value="S_R_A_B_BARREL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Stress-response A/B barrel" evidence="1">
        <location>
            <begin position="2"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="10887" checksum="F54C2EE5EF155E64" modified="2011-01-11" version="1">MIKHIVLFKLKDRSPESIEHTASILRSMNGKIKELLSLEVGTDVIRSERSYDISLTAVVETLEDLQTYQVHPVHQEIIVHMNEVKDVSIAVDYEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFZ8</accession>
    <name>E3EFZ8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Signal recognition particle protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Fifty-four homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ffh</name>
        <name evidence="11" type="synonym">ffH</name>
        <name evidence="11" type="ORF">PPSC2_09715</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="7">The SRP-RNC complex is targeted to the cytoplasmic membrane.</text>
    </comment>
    <comment type="domain">
        <text evidence="7">Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the GTP-binding SRP family. SRP54 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370646.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22180"/>
    <dbReference type="EnsemblBacteria" id="ADO56031">
        <property type="protein sequence ID" value="ADO56031"/>
        <property type="gene ID" value="PPSC2_09715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2047"/>
    <dbReference type="eggNOG" id="COG0541">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009301_6_0_9"/>
    <dbReference type="OMA" id="DTAGRHK"/>
    <dbReference type="OrthoDB" id="656414at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048500">
        <property type="term" value="C:signal recognition particle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008312">
        <property type="term" value="F:7S RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00306">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036891">
        <property type="entry name" value="Signal_recog_part_SRP54_M_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013822">
        <property type="entry name" value="Signal_recog_particl_SRP54_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004125">
        <property type="entry name" value="Signal_recog_particle_SRP54_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004780">
        <property type="entry name" value="SRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022941">
        <property type="entry name" value="SRP54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042101">
        <property type="entry name" value="SRP54_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564">
        <property type="entry name" value="PTHR11564"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564:SF7">
        <property type="entry name" value="PTHR11564:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02881">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02978">
        <property type="entry name" value="SRP_SPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00963">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47446">
        <property type="entry name" value="SSF47446"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00959">
        <property type="entry name" value="ffh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0733">Signal recognition particle</keyword>
    <feature type="domain" description="SRP54_N" evidence="10">
        <location>
            <begin position="2"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="8">
        <location>
            <begin position="100"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="SRP54" evidence="9">
        <location>
            <begin position="101"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="108"/>
            <end position="115"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="190"/>
            <end position="194"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="248"/>
            <end position="251"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="458" mass="50749" checksum="84DF2D01DA1AE246" modified="2011-01-11" version="1">MAFEGLSTRLQNVFSKLRGKGKVSEDDVAQAMREVRLALLEADVNFKVVKDFIAKVKEKSVGKEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQILGEQINAPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELRQIHTNVKPDEVLLVVDSMTGQDAVNVAEHFNNSLELTGVVLTKLDGDTRGGAALSVKAVTGCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTKQEKQNPDMINHSRRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALKQLKSMGKGMKFPFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG04</accession>
    <name>E3EG04_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Signal peptidase I</fullName>
            <ecNumber evidence="4 6">3.4.21.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sipS3</name>
        <name evidence="9" type="ORF">PPSC2_09745</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins.</text>
            <dbReference type="EC" id="3.4.21.89"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Membrane</location>
            <topology evidence="6">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the peptidase S26 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.89" evidence="4 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370651.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22210"/>
    <dbReference type="EnsemblBacteria" id="ADO56037">
        <property type="protein sequence ID" value="ADO56037"/>
        <property type="gene ID" value="PPSC2_09745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2053"/>
    <dbReference type="eggNOG" id="COG0681">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028723_5_0_9"/>
    <dbReference type="OMA" id="RSQVWVK"/>
    <dbReference type="OrthoDB" id="1741894at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000223">
        <property type="entry name" value="Pept_S26A_signal_pept_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019758">
        <property type="entry name" value="Pept_S26A_signal_pept_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43390">
        <property type="entry name" value="PTHR43390"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10502">
        <property type="entry name" value="Peptidase_S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00727">
        <property type="entry name" value="LEADERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02227">
        <property type="entry name" value="sigpep_I_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00761">
        <property type="entry name" value="SPASE_I_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S26" evidence="8">
        <location>
            <begin position="29"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR600223-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF10502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="23829" checksum="A8AC3A303D423381" modified="2011-01-11" version="1">MEQEVGQGAVQQPTDQDGTPKRKPKNEIFEWLKAIIIALVLVFLIRWLLFKPFIVDGPSMQPNFHTGERVIVNEILYDFRAPKPGEVIVFHVPEEKRDFIKRVIAVAGDTVKVEGDTITVNGKPIQEPYLKAPLEEAHQNGELYNKFTNFPNEKFKNGKVPEGHIFVMGDNRSNSTDSRMIGYIDLKEVVGRADVIFWPVMDMQWINH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG05</accession>
    <name>E3EG05_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Ribosome biogenesis GTPase A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ylqF</name>
        <name evidence="5" type="ORF">PPSC2_09750</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56038.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599660.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22215"/>
    <dbReference type="EnsemblBacteria" id="ADO56038">
        <property type="protein sequence ID" value="ADO56038"/>
        <property type="gene ID" value="PPSC2_09750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2054"/>
    <dbReference type="eggNOG" id="COG1161">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011106_1_0_9"/>
    <dbReference type="OrthoDB" id="1083771at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030378">
        <property type="entry name" value="G_CP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023179">
        <property type="entry name" value="GTP-bd_ortho_bundle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019991">
        <property type="entry name" value="GTP-bd_ribosome_bgen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016478">
        <property type="entry name" value="GTPase_MTG1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006230">
        <property type="entry name" value="MG442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03596">
        <property type="entry name" value="GTPase_YlqF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51721">
        <property type="entry name" value="G_CP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CP-type G" evidence="4">
        <location>
            <begin position="13"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="58"/>
            <end position="61"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="130"/>
            <end position="135"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00014898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR006230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR006230-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56038.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="286" mass="32171" checksum="78F6619C72D2577F" modified="2015-05-27" version="2">MTIQWFPGHMTRARRQIEAKLKLIDLVIELIDARLPLSSRNPMIDDILQGKPRMIILNKADLADPVVSQQWIAYFKEQGHVAFPVDATTGTGLKEIPVQAKLLLKEKIDRQISKGMNPRPIRALIVGIPNVGKSTLINRMAGRNIAATGDRPGVTKAQQWIKTGEIELLDTPGILWPKFEDQNVGYRLAVTGAIKEEILNVEDIAFFATKYLVQYYWDAMAERFELTERPEDTENPDDVVNVMEAIGRKRGCIVSGGRVDLEKASKIILRELRAGKLGRFSLEAPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGE1</accession>
    <name>E3EGE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cu amine oxid N1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">M1-323</name>
        <name evidence="5" type="ORF">PPSC2_00930</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368813.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13920"/>
    <dbReference type="EnsemblBacteria" id="ADO54169">
        <property type="protein sequence ID" value="ADO54169"/>
        <property type="gene ID" value="PPSC2_00930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.174"/>
    <dbReference type="eggNOG" id="COG5513">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_753828_0_0_9"/>
    <dbReference type="OMA" id="WNAAQKT"/>
    <dbReference type="OrthoDB" id="1624082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021729">
        <property type="entry name" value="DUF3298"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025303">
        <property type="entry name" value="PdaC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037126">
        <property type="entry name" value="PdaC/RsiV-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11738">
        <property type="entry name" value="DUF3298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13739">
        <property type="entry name" value="PdaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168432" evidence="1">
        <location>
            <begin position="32"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="63"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="127"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="domain" description="PdaC" evidence="4">
        <location>
            <begin position="173"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3298" evidence="3">
        <location>
            <begin position="281"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="369" mass="39882" checksum="98993C810EE012C8" modified="2011-01-11" version="1">MNKHTKKWGSALLAAGILAGVAVIPVSYIGAASTKQQQATTQQPGIAIQWNGKTLAAKGIQVNGNTMIPVAALRDSLGIPVSYDTKEGTYTVGSGYNKLYIVVSSSDAYVNVNGINTRSMDAKMIAGKLYIPMSLLKDYLGIDAQWNAAQKTVTLSKSQLNPITIASQTLPASSNAKVSYKIKYPQISGSQLNPEAQQTINNVLKKHAETVLAAGKKMVAEGEVTAERPYDFENDFAIAYNKDGILSVIMQDYSYTGGAHGMTARKGYTFSLADGKLLQLSDVLKANPNYKKFLNADLKKKIDALQAGEGFEKFKELAADQNFYVTNSGVTIVFDLYDYAPYAYGIPEFTYSFAQLLPQGGKPFAGQNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGQ1</accession>
    <name>E3EGQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369768.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18515"/>
    <dbReference type="EnsemblBacteria" id="ADO55135">
        <property type="protein sequence ID" value="ADO55135"/>
        <property type="gene ID" value="PPSC2_05610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1141"/>
    <dbReference type="eggNOG" id="COG2856">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_122894_1_2_9"/>
    <dbReference type="OMA" id="RRFIVIH"/>
    <dbReference type="OrthoDB" id="1840229at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="1">
        <location>
            <begin position="21"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16595" checksum="F016A2054866A1F2" modified="2011-01-11" version="1">MNELIHKLVRKYRTNCPFDIAKALGIHIRYCDLGSTTKGLYYHKLRRRFIVIHNGLTPEWERFVCAHELGHDRLHKGISRFFMEEHSYFSPGKFEQQANRFAVLLLSEGNPPLADETLDHYLPRIGLPKETALFFDHKTEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGU5</accession>
    <name>E3EGU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Nitrate/nitrite response regulator protein narL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yhcZ</name>
        <name evidence="7" type="ORF">PPSC2_05790</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369811.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18755"/>
    <dbReference type="EnsemblBacteria" id="ADO55179">
        <property type="protein sequence ID" value="ADO55179"/>
        <property type="gene ID" value="PPSC2_05790"/>
    </dbReference>
    <dbReference type="GeneID" id="66573783"/>
    <dbReference type="KEGG" id="ppm:PPSC2_05790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1185"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_90_10_9"/>
    <dbReference type="OMA" id="VAMDVRM"/>
    <dbReference type="OrthoDB" id="1687028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="2"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="5">
        <location>
            <begin position="137"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="214" mass="23838" checksum="1D056430B103E4F3" modified="2011-01-11" version="1">MKIVIVDDHPLVRKGLAAVISMQPNVQFAGEAQNQQEALAVIEETDPDLVLLDLKLADESGLDIIKIARGRGFRSKFILLTSSATREDFLKAEEASVDGYVLKEALPEELIYAIHLVNKGRKYYDPAILENKLREDAGNLTDDLTPKEKEVLVELGQGACNREIASRLFISEFTVKKHVSQILAKLRLADRTQAALYANAIGLAKYEPTNMMMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGY9</accession>
    <name>E3EGY9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">puuR1</name>
        <name evidence="2" type="ORF">PPSC2_07520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370176.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55549">
        <property type="protein sequence ID" value="ADO55549"/>
        <property type="gene ID" value="PPSC2_07520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1554"/>
    <dbReference type="eggNOG" id="COG1396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_085376_5_0_9"/>
    <dbReference type="OMA" id="GEMYFEM"/>
    <dbReference type="OrthoDB" id="1069752at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="20695" checksum="B4A42FF3C226C65F" modified="2011-01-11" version="1">MDSMQYIIGSNLAQIRKTRGLSLDKVAELTGVSKGMLAQIEKGRSNPTVTTLWKIANGLHVSFSTFLKEDPPQITKIRRADLHPVIDEGGNYFVYPVFPYHSEKKFEVFTVSLKPGFTHKAEEHLGEETILMIRGEMYFEMQGQQLKLSAGDAVQFQGSDFHTYRNDSDEDADFYVLIYYAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH63</accession>
    <name>E3EH63_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Poly-gamma-glutamate biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">capA</name>
        <name evidence="5" type="ORF">PPSC2_08880</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CapA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370472.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1882"/>
    <dbReference type="EnsemblBacteria" id="ADO55854">
        <property type="protein sequence ID" value="ADO55854"/>
        <property type="gene ID" value="PPSC2_08880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1872"/>
    <dbReference type="eggNOG" id="COG2843">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038823_2_4_9"/>
    <dbReference type="OMA" id="MANNHGM"/>
    <dbReference type="OrthoDB" id="1003186at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07381">
        <property type="entry name" value="MPP_CapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019079">
        <property type="entry name" value="Capsule_synth_CapA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09587">
        <property type="entry name" value="PGA_cap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00854">
        <property type="entry name" value="PGA_cap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="PGA_cap" evidence="4">
        <location>
            <begin position="163"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="65"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="65"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="121"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="473" mass="51087" checksum="2E67DBAC55ACEF32" modified="2011-01-11" version="1">MYPPRSQRNEGRKRARKPKIGKAWIITNLVLLFMIVGLFGYYYIFEHDSSGSLAENAKYSQTEKNIQTGSANDENSTPSGSEDVNETKDSTVPDTSSRPVTTPDTNASEASSSGAKLSSEKDGQAQEDSPNKDVNNDDAPTEKRGTKDVIKSNTDDGNSPAVILHFIGDVQFSGKVEQRLEQNGFDYPYQYLGSLFHKDDLTIANLETPVTTNGVGALNKTYVYKSSPKALTAMAAAGVDAVNLANNHILDQGTSGLLDTLKYLDEKGIAHAGAGRNAKEAYAPHYFERNGIKIALLGATRVMPEANWNASAKQPGVAGAYDSTAIVKSIREARNQADLVIVVAHWGKERATTLEPHQTELSHAFIDAGADLVIGGHPHVLQGMEQYKGKWIAYSTGNFIFSKSTVPATWDTAIFQATCTRNGDCKMKLTPYRAELGQPIPLKDVEASKILQKVATLSPSNVSIGVDGTVSAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHF2</accession>
    <name>E3EHF2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Zinc metalloprotease</fullName>
            <ecNumber evidence="9">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">yluC</name>
        <name evidence="11" type="ORF">PPSC2_10065</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the peptidase M50B family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370715.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22535"/>
    <dbReference type="EnsemblBacteria" id="ADO56105">
        <property type="protein sequence ID" value="ADO56105"/>
        <property type="gene ID" value="PPSC2_10065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2121"/>
    <dbReference type="eggNOG" id="COG0750">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025778_1_0_9"/>
    <dbReference type="OMA" id="QYMVGFG"/>
    <dbReference type="OrthoDB" id="1395197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004387">
        <property type="entry name" value="Pept_M50_Zn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008915">
        <property type="entry name" value="Peptidase_M50"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42837">
        <property type="entry name" value="PTHR42837"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02163">
        <property type="entry name" value="Peptidase_M50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00054">
        <property type="entry name" value="TIGR00054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 11" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="11" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6 9" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="169"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="349"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="395"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="10">
        <location>
            <begin position="194"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU362031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="423" mass="47042" checksum="B075330B17A17F64" modified="2011-01-11" version="1">METIQIVLMTVLMFFVIVTVHEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETRFTLRLLPFGGFARMAGEDPEVNEIETGQTIAVRVTDGVVKTIYLDQLDNRKNVVRGEVLDIDLEQALTVKLDVDGEDQQYTVHPQAMMVTKGQSIQIAPKDRQYGSKTVGQRAMAIFAGPLMNFILAFILFGLHIQMVGIQVDNPTYVQISEITAGMPAAEADLHKGDIIESVNGVAIGANVENMIKLIADSQDKPMKWTVRRDDKTFDLTITPRAMEGQKGGKVGIVPELPKRQAGVGETFKFAGQSMVRTTDIIFQGFSQLIQRFSINDLGGPVRTFEVTGQIAKQGIEQLTYWTAIMSLYLGIFNLLPIPALDGSRLVFLGVEAVRGRPVDPSREGMVHFVGFAMLFLLMIAVTYNDILRLING</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH4</accession>
    <name>E3EHH4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">4-hydroxy-tetrahydrodipicolinate synthase</fullName>
            <shortName evidence="8">HTPA synthase</shortName>
            <ecNumber evidence="4 8">4.3.3.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dapA</name>
        <name evidence="10" type="synonym">dapA3</name>
        <name evidence="10" type="ORF">PPSC2_10170</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 8">Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>L-aspartate 4-semialdehyde + pyruvate = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + H2O</text>
            <dbReference type="Rhea" id="RHEA:34171"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:67139"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="4.3.3.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homotetramer; dimer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the DapA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB.</text>
    </comment>
    <dbReference type="EC" id="4.3.3.7" evidence="4 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370736.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22640"/>
    <dbReference type="EnsemblBacteria" id="ADO56127">
        <property type="protein sequence ID" value="ADO56127"/>
        <property type="gene ID" value="PPSC2_10170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2143"/>
    <dbReference type="eggNOG" id="COG0329">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049343_7_1_9"/>
    <dbReference type="OMA" id="GMDACVP"/>
    <dbReference type="OrthoDB" id="1438588at2"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008840">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00950">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00418">
        <property type="entry name" value="DapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005263">
        <property type="entry name" value="DapA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002220">
        <property type="entry name" value="DapA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020624">
        <property type="entry name" value="Schiff_base-form_aldolases_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12128">
        <property type="entry name" value="PTHR12128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00701">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001365">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00146">
        <property type="entry name" value="DHPICSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01130">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00674">
        <property type="entry name" value="dapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00665">
        <property type="entry name" value="DHDPS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="8 9 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 8" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0704">Schiff base</keyword>
    <feature type="active site" description="Proton donor/acceptor" evidence="8">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="8">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </ligand>
    </feature>
    <feature type="site" description="Part of a proton relay during catalysis" evidence="8">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <feature type="site" description="Part of a proton relay during catalysis" evidence="8">
        <location>
            <position position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR001365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="31383" checksum="CFA0D2254FD346D9" modified="2011-01-11" version="1">MVNFGRLITAMVTPFDQQGEIDWTALSSLIDYLIEEQHSESLVVSGTTGESPTLSDDEKIKLFAFVVEKAAGRCKIIAGTGSNNTRHSIHLTRAAEQAGADGVLLVVPYYNKPNQEGMYQHFKSIANSTSLPAILYNVPSRTGASLTAETTLRLAQIPNIVGTKECASLAQVTQIAAAAPEGFLVYSGDDASGLPAMAVGAYGIISVASHVVGAEMKRMLDSFVGGHAQEAAKLHQQLFPIFKGMFGCPHPLPNPVAVKYALELRGIKVGSVRLPLIPPTEDEAEFIKNLFTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHK6</accession>
    <name>E3EHK6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Molybdenum cofactor biosynthesis protein B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mobB1</name>
        <name evidence="8" type="ORF">PPSC2_10315</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">May be involved in the biosynthesis of molybdopterin.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the MoaB/Mog family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370766.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22785"/>
    <dbReference type="EnsemblBacteria" id="ADO56159">
        <property type="protein sequence ID" value="ADO56159"/>
        <property type="gene ID" value="PPSC2_10315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2173"/>
    <dbReference type="eggNOG" id="COG0521">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077358_2_3_9"/>
    <dbReference type="OMA" id="TGWDGIL"/>
    <dbReference type="OrthoDB" id="1528139at2"/>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00886">
        <property type="entry name" value="MogA_MoaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012245">
        <property type="entry name" value="MoaB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008284">
        <property type="entry name" value="MoCF_biosynth_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43232">
        <property type="entry name" value="PTHR43232"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00994">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006443">
        <property type="entry name" value="MoaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00177">
        <property type="entry name" value="molyb_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01078">
        <property type="entry name" value="MOCF_BIOSYNTHESIS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="7">
        <location>
            <begin position="20"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00015262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR006443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="18822" checksum="88BD433951ACC69E" modified="2011-01-11" version="1">MNITSVEEHRQESPQQVNCMVVTVSDTRTMETDTGGRLLKELLETNGYKVVRYVIVKDDYEGIRQLVAEAAAHEDIEAVLLTGGTGISPRDTTYEAVSSLLDKELPGFGEIFRYLSFAEDIGSAAILSRAVAGTVGQTAVFSMPGSRGAVRLAMERIIVPELRHVMREIYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHM8</accession>
    <name>E3EHM8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ytnJ</name>
        <name evidence="4" type="ORF">PPSC2_10895</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NtaA/SnaA/DszA monooxygenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370896.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23285"/>
    <dbReference type="EnsemblBacteria" id="ADO56290">
        <property type="protein sequence ID" value="ADO56290"/>
        <property type="gene ID" value="PPSC2_10895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2307"/>
    <dbReference type="eggNOG" id="COG2141">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022256_1_2_9"/>
    <dbReference type="OMA" id="QVEGYHL"/>
    <dbReference type="OrthoDB" id="1591714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01095">
        <property type="entry name" value="Nitrilotriacetate_monoxgenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016215">
        <property type="entry name" value="NTA_MOA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000337">
        <property type="entry name" value="NTA_MOA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03860">
        <property type="entry name" value="FMN_nitrolo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0288">FMN</keyword>
    <keyword evidence="4" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="3">
        <location>
            <begin position="18"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="58"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="145"/>
            <end position="149"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="217"/>
            <end position="220"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00033748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000337-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="446" mass="49849" checksum="A363FE698FEE7E15" modified="2011-01-11" version="1">MAKNRQIKLGAIIHGVGGSMTTWRHPDVPADASINFDFYKTQAQKAEEGKFDLVFIADGLFINEKSIPHFLNRFEPITILSALAGVTKHIGLVGTLSTSYSEPFTVARQFSSIDHISGGRAGWNVVTSPLEGSALNFNKGEHPSHPQRYKIADEYLQVTKGLWDSWEEDAFVRDKEAGVFFDPDKLHTLNHKGEFFSVQGPLNIGRSKQGQPVIFQAGSSEDGKNLAAKEADAVFTGHETLEEAQQFYRDVKERAVRYGRAEEDIVILPGISPIIGSTPEEAERKYEEITNLVTIEAALKYLGRFFDHHDFSQYPLDEPFPELDGIGSNSFRSGTDKIKRTAKEQNLTLREVALRSATPRTSFIGTAEQVADRVQEWFERKGADGFIIGSDVPTGLHDFVNLVVPILQERGIYRQDYEFNTLRENLGVPIPENRYTAARSKVKVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHQ7</accession>
    <name>E3EHQ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cysteine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cysM</name>
        <name evidence="4" type="ORF">PPSC2_11030</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370925.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23420"/>
    <dbReference type="EnsemblBacteria" id="ADO56319">
        <property type="protein sequence ID" value="ADO56319"/>
        <property type="gene ID" value="PPSC2_11030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2335"/>
    <dbReference type="eggNOG" id="COG0031">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021018_1_0_9"/>
    <dbReference type="OMA" id="WMADYGF"/>
    <dbReference type="OrthoDB" id="1033353at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001216">
        <property type="entry name" value="P-phosphate_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00901">
        <property type="entry name" value="CYS_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="10"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="32932" checksum="CB79852F3DCECC34" modified="2011-01-11" version="1">MNVYRNTLELIGRTPLVELNSYSLPRGIRLFAKLEFMNPGGSVKDRVGKALIEKALKTGQLKPGGTLIEATAGNAGIGLAMAALHYDISVIFAVPEKFSQEKQDLMKALGARIVHTPTSEGMKGAIEKTKQLAAEIKDAYLPQQFSNPDNPEAYYTTMGPEIWNDLDGKVDVFVAGAGSGGTFMGTSRYLKEQNAAIKTVIVEPEGSILNGGESGPHKTEGIGMELIPEFVDKGYFNAIHTISDVDAFNRVKELAEREGILVGSSSGSALHAALLEAESAPDGAHIVTIFPDSSERYLSKKIYEGGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHR3</accession>
    <name>E3EHR3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">von Willebrand factor A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">vWFA1</name>
        <name evidence="4" type="ORF">PPSC2_11050</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370931.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23440"/>
    <dbReference type="EnsemblBacteria" id="ADO56325">
        <property type="protein sequence ID" value="ADO56325"/>
        <property type="gene ID" value="PPSC2_11050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2341"/>
    <dbReference type="eggNOG" id="COG2304">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_456857_0_0_9"/>
    <dbReference type="OMA" id="MKMFIDM"/>
    <dbReference type="OrthoDB" id="370392at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00092">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169251" evidence="2">
        <location>
            <begin position="34"/>
            <end position="600"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="459"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="domain" description="VWFA" evidence="3">
        <location>
            <begin position="42"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="600" mass="65081" checksum="9E04B749CC9BA48C" modified="2011-01-11" version="1">MFSRDRKWFLVIGIICTMIMSSILAWQPQTANAASPSASKVDAVLVVDVSNSMNTSDPGKIGNEAMKMFIDMLSTQNDKVGIVAYTDVVQREKALLNISSEADKQELKTFIDGLNRGAYTDTSVGVKEAIRILQDGKTAGHAPMIVMLADGNNDFNKTTGRTESQSAQDMAQAVAEAKKSGVPIYTIGLNADGKLNKNKLADIAQQTGGKSFITSSADDLPNILSEIFASNLKLKVVPLQSITANGDYQDVTVTVPNDSVLEANISIMSSKPVDARLIDPSGNTKSIPSSDVLLSKSKSYSLIKLLKPVAGDWKLQVKGVQQDKIDINLVFNYDLELKLDAPPAKSYKKGDSVQIRSYLTSNNQPYQDQELYANMNAVLKVKDLDTGATNEVPLTNAGDAFTGSYTIPDEHDYELTVRAEEKSFYRETQPVTISAKAGAASGTNTGTTQPTAPAEKSKLLPLILLGVGLLVLLVAAYFIWKAVKKANRGFVGQIVLEIRDENTGEKTYPQYKKLNTFRGKFNLHQLLQLAPEFAGTDKVVFTPANQDRIVVRSTPEITIEKSGRAVDAGNGLELKNGDRLTIPLASVDKTILLEFISVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHR5</accession>
    <name>E3EHR5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcription initiation factor TFIID</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_11060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370933.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23450"/>
    <dbReference type="EnsemblBacteria" id="ADO56327">
        <property type="protein sequence ID" value="ADO56327"/>
        <property type="gene ID" value="PPSC2_11060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2344"/>
    <dbReference type="eggNOG" id="ENOG502ZA6K">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019686_0_0_9"/>
    <dbReference type="OMA" id="RDNCERI"/>
    <dbReference type="OrthoDB" id="267395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="544"/>
            <end position="571"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="788" mass="90444" checksum="6EFB9F218747B04F" modified="2011-01-11" version="1">MREQLLRYAADYAAAEDQLIGSGDGRSSIHFPSVFLFIGDHMSPVMNTIADINRTKWDNSTGVTYIQICSQEEHEAADRSVEAIVHTVAVPEESSHQTLRRDLHQAFYTHESKLIELNTALRRASGHLADYGRLYSSFERVHLSILTTADDPMNVLIPEITLLAEYIFAQSFKSVQMDLYVLMSESDQAAQFGYRSATSVAFMRELDYIQSPAYTFTAPLHMTEDKLTIPVSHAPSPLFDLVYVLSDKNERGVTVPNSLRESCDIICHIQLLKNRYQAGDSYRSQDGGYNNTSFKNNIMTESGRQGYVSAGFSRVNRPNQSIALTVLYHFYVKLLERMRTEQDWDIRDKLNYFGLDAAERGRTRNDLVPGNEAIMDMSALMTSGASYGSLKRMSLREAEETLFGQGCEAFFRDNCERIVQKRLGDFQADMRLQVAVNAAAKEHPHIGFFELTDWTDENQTGNVLTAVRGMIRDTSNDLQISAAELDALYSGRVEDQPFQRLPLMDKHNVRSLIRYLTETVYGHKMHMLRIQVDLELLRRYEMALEKWHAQAKHITVQLANLERELHQAATDSIRQADSYTGQNLFEYYERVTEDVMHELESKRGKSIFFDARHMGPVSGLLDEGLSALVDRLTQTCRTLILSSQPFNQTFEEELLRRANVAAAYENRLVVPKDELFKKLYQTLEEHGGINVRLLDYTHEHRYEEKYFFGDYEGEFLPYAMDVDITSRIYKLGFVHERRSSGVEKLHLMGGFHLEDLMVYRNGKTYYETYTANGFVFHGIDVDRLPELR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHT9</accession>
    <name>E3EHT9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Zinc ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">adcB</name>
        <name evidence="8" type="ORF">PPSC2_11175</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the ABC-3 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56351.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885942.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23570"/>
    <dbReference type="EnsemblBacteria" id="ADO56351">
        <property type="protein sequence ID" value="ADO56351"/>
        <property type="gene ID" value="PPSC2_11175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2366"/>
    <dbReference type="eggNOG" id="COG1108">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028808_3_1_9"/>
    <dbReference type="OrthoDB" id="1421296at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001626">
        <property type="entry name" value="ABC_TroCD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30477">
        <property type="entry name" value="PTHR30477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00950">
        <property type="entry name" value="ABC-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="131"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="169"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="243"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56351.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="282" mass="30025" checksum="6FC5A396E2D74AFF" modified="2015-05-27" version="2">MEMLHYDFMQRAFCAGGVIALLASVLGVYLMLRRQALMADMLSHVSLAGVAAGAYLGISPTITGFIVAVIGAIIVEYVRRSYKTYSEISVAIIMVGGLSTAVILMNLNQSINKGFSAYLFGSVVAVNQTELMLMIVVAVIGGIFFFVFRRPLYQITFDEETAKTNGLPVKSISFAFSILTGMIVAAAMPIVGVLLVSSLIVLPAALAIRIAPSFAAAIWISMITALIGVFMGLTASYELSTPPGGTIAMVLLLFLIVGASIQKLVRKLGKQQASRRKNTAGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHY0</accession>
    <name>E3EHY0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iS4C</name>
        <name evidence="2" type="ORF">PPSC2_11750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371077.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2501"/>
    <dbReference type="EnsemblBacteria" id="ADO56472">
        <property type="protein sequence ID" value="ADO56472"/>
        <property type="gene ID" value="PPSC2_11750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2486"/>
    <dbReference type="eggNOG" id="COG3385">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055577_0_0_9"/>
    <dbReference type="OMA" id="RREVICI"/>
    <dbReference type="OrthoDB" id="699395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="84"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="34962" checksum="F6FCD792F00DE1C8" modified="2011-01-11" version="1">MREIAQRGHGPLFVILDDTVCEKTKPSSQATHRIQGASFQHSHLKGQSVYGHVVVQALLRSGDRVFPFASERYDREAKSKIDLACEMIRSVPMSTCRTYVLMDSWYPSASVLQTSAERGFHVISGLKTNRIFYPQGIRQSLKNFASYISKSDTVLVTIGSSAYRVYRYEGKLNLLENAALLLCWKEGDGFEPKQMKAFLSTDISLSNEEILCYYSKRWDIETYFRTAKVQLAMDRYQVRSTQAIDRYLTLLMFSALYCQYDSQGSLNDGLHHYRIQKKHDMIDYIYNQAKSGATLDQIKTWLSVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI06</accession>
    <name>E3EI06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sdr2</name>
        <name evidence="2" type="ORF">PPSC2_12320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371199.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2626"/>
    <dbReference type="EnsemblBacteria" id="ADO56595">
        <property type="protein sequence ID" value="ADO56595"/>
        <property type="gene ID" value="PPSC2_12320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2614"/>
    <dbReference type="eggNOG" id="COG1231">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004498_0_2_9"/>
    <dbReference type="OMA" id="ASFIHYE"/>
    <dbReference type="OrthoDB" id="1442136at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="1">
        <location>
            <begin position="114"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="40754" checksum="4227B9FFA8C3271A" modified="2011-01-11" version="1">METQLNRDAPVIIVGAGLCGLRAAALLNTHGIRYLILEARNRIGGRGLSVEVEGKPELGKFDLGPTWYWPRYEIAMNQLVEELSLQTFEQYNEGRMLVERSRNTPPQQHDLSAEAMEYSLRFIGGVQSLIDALAAQIPSEAIYLNTKVTSIHQEDDSRVKIQTDAGNFHASSVIVALPPRIVERNITFFPKLSAELKSNLMNKPTWMASQAKIIAVYDTPFWRDQGLSGFVSSWVGPLREIHDASPSTGSGALFGFFGLPAKARLNMGNEQLLELVLEQLTRLFGPAAKHVKGTLFKDWSFDEHTAVEEDTDPLLDYPSYGPIIDGKGSRQNIYFAGTETAYRQGGHLEGALRSAERVVNEVIKHLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI79</accession>
    <name>E3EI79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal-dependent hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcJ</name>
        <name evidence="2" type="ORF">PPSC2_03825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369383.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0764"/>
    <dbReference type="EnsemblBacteria" id="ADO54747">
        <property type="protein sequence ID" value="ADO54747"/>
        <property type="gene ID" value="PPSC2_03825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.757"/>
    <dbReference type="eggNOG" id="COG1574">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009942_8_0_9"/>
    <dbReference type="OMA" id="DIACHAI"/>
    <dbReference type="OrthoDB" id="751534at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013108">
        <property type="entry name" value="Amidohydro_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07969">
        <property type="entry name" value="Amidohydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro_3" evidence="1">
        <location>
            <begin position="57"/>
            <end position="520"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="527" mass="58591" checksum="F82A7F6B9E336E5A" modified="2011-01-11" version="1">MQGMKDTLADKVLLSNAIFNGLENEASPGFIAVRGERIAAVGHPEEAQAWIGSETVVYDLGDAFIMPGIHDNHVFFTGYMSMHRGVDLTHTASSEEAVQLLLQEANHLPSGKDVTAYGWSEEKWGELPEPSLLDGLFPDRAVIAINQNKSYCWMNRLAEERYQFSPDQCSAEARALLLQAMMQDRSLVQQEFMEFCRLLAARGVTSIKDIGFDRHSELLPILEELKETGELPLRFHFSLEPVVEPFDISIGIKYKALYHGDLIRFQGYKLMLDGVVADHTGDMLEPYADMPGVTNLRAVDYEKIEASVLEADSQGIKCCLTAEGDAAIRQAVSMIEKCRAQQGNHLIRHSISDLEYPHPDDLNRMGENEIFAEVYAQILLLNPSYEEAYMSAVAGKENENRFYNYKSMLEANVPITIGTDLPLFITSVPDSLYAASHRLFPDGSPAGGWYPDQGMPASEVLKAWTINGAKHCYMEEVTGTLEAGKYADIAVFDRDLLNASAGDIRDAQVILTIMGGKVTYNHSWNEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIC1</accession>
    <name>E3EIC1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Branched-chain amino acid dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">atoD</name>
        <name evidence="3" type="ORF">PPSC2_06050</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit A family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369866.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19015"/>
    <dbReference type="EnsemblBacteria" id="ADO55234">
        <property type="protein sequence ID" value="ADO55234"/>
        <property type="gene ID" value="PPSC2_06050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1240"/>
    <dbReference type="eggNOG" id="COG1788">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019942_2_0_9"/>
    <dbReference type="OMA" id="FVKAWKG"/>
    <dbReference type="OrthoDB" id="1660857at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012792">
        <property type="entry name" value="3-oxoacid_CoA-transf_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004163">
        <property type="entry name" value="CoA_transf_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02429">
        <property type="entry name" value="pcaI_scoA_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01273">
        <property type="entry name" value="COA_TRANSF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="23720" checksum="50564461780CDA3B" modified="2011-01-11" version="1">MNKKVNSAEEAIKKIKDGDTVMVGGFMQGGIPEELVRALVDSNSADNLTIISNDTGTPELSIYRLVKSGRVKRIFASYIGSNPETGRLLMTKEADVQLFPQGTLAEKIRAGGAGLGGILTPVGVGTIVEEGKKKIKIDEREYLLELPLKADVALIRAHKADEAGNLVINGSSRNFNLVMATAAEYVVAQTDEYVKAGEIDPNHINVPGIFVDAIVKVGGDNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIC6</accession>
    <name>E3EIC6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase M22</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydiC3</name>
        <name evidence="2" type="ORF">PPSC2_06075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369871.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19040"/>
    <dbReference type="EnsemblBacteria" id="ADO55239">
        <property type="protein sequence ID" value="ADO55239"/>
        <property type="gene ID" value="PPSC2_06075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1245"/>
    <dbReference type="eggNOG" id="COG1214">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064886_0_1_9"/>
    <dbReference type="OMA" id="ERNHSVH"/>
    <dbReference type="OrthoDB" id="1826274at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002949">
        <property type="term" value="P:tRNA threonylcarbamoyladenosine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000905">
        <property type="entry name" value="Gcp-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022496">
        <property type="entry name" value="T6A_TsaB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735">
        <property type="entry name" value="PTHR11735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735:SF11">
        <property type="entry name" value="PTHR11735:SF11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00814">
        <property type="entry name" value="TsaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03725">
        <property type="entry name" value="T6A_YeaZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TsaD" evidence="1">
        <location>
            <begin position="45"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="30745" checksum="77AE0EFA84B224E9" modified="2011-01-11" version="1">MQREHTDVNEKPRERFLTLDTATTVMAAALMNGKELLGESNVFGERNHSVHVITELERLLSEAGLTRDDVDGLAVGVGPGSYTGIRIAVTAAKTLAWAWGVPVTSISTLHALAWGGWNRGIELKGQEGKQESVNNDLPGAQAADWIVPVLDARRGQVYTGLFATNTVKDIGSPQRLEPDAIRLMTAWTDDLLQRLEALPAEERPAVIWLVGETAVHAETAERLRAWSELRVVPYELEGKWVGRLGADKLLRQEYDELHTLVPNYTQLAEAEANLLRQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIE3</accession>
    <name>E3EIE3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Large adhesin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369887.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1276"/>
    <dbReference type="EnsemblBacteria" id="ADO55256">
        <property type="protein sequence ID" value="ADO55256"/>
        <property type="gene ID" value="PPSC2_06150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1264"/>
    <dbReference type="eggNOG" id="COG4675">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1123675_0_0_9"/>
    <dbReference type="OMA" id="FIISETG"/>
    <dbReference type="OrthoDB" id="1772047at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="SSF49842"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="26477" checksum="104CFC8A19CCE2A4" modified="2011-01-11" version="1">MFRHYCWQKRMHRRKFRRCAVKKVKVLPKVIVKGIRGPQGPQGPQGLPGPQGVPGAQGQQGLQGFQGIPGPAGPVGVTGPAGAVGPAGQAGAIGPAGPAGPAGAIGPAGPAGAIGPAGPAGATGPAGPAGPAGVGISDFLSVFRADPGTGTDTVPGNTPITFTGVLANVGGAFTFTPPSPTITINETGSYFISFSIHNQGDADFNLTVNGTPITPLPFSGNGGGPTAAEVIVTVTTVPTTIQLVNANATPAQLHNNINTTMTILKLTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIN8</accession>
    <name>E3EIN8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_08040</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370299.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1701"/>
    <dbReference type="EnsemblBacteria" id="ADO55676">
        <property type="protein sequence ID" value="ADO55676"/>
        <property type="gene ID" value="PPSC2_08040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1691"/>
    <dbReference type="eggNOG" id="ENOG5033HNP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1784980_0_0_9"/>
    <dbReference type="OrthoDB" id="1544996at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168467" evidence="2">
        <location>
            <begin position="30"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16246" checksum="85A66D271637E06A" modified="2011-01-11" version="1">MKVKFLPQAFLAATLLISLVVASPAISHAEKGGKIPDQMLAGTIIQYDENNNMVVLEKGTPVPEQQKSKAAIAPLTAEQQVELEKEKQQDKEIEEATKSLPVYHIDNPDPQPGLKVIYDGEGFIKDIILPDQKEINWDLYIRRIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIS3</accession>
    <name>E3EIS3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Ribonucleoside-diphosphate reductase</fullName>
            <ecNumber evidence="5 10">1.17.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">nrdE</name>
        <name evidence="12" type="ORF">PPSC2_09305</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>[thioredoxin]-disulfide + a 2'-deoxyribonucleoside 5'-diphosphate + H2O = [thioredoxin]-dithiol + a ribonucleoside 5'-diphosphate</text>
            <dbReference type="Rhea" id="RHEA:23252"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="EC" id="1.17.4.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Genetic information processing; DNA replication.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the ribonucleoside diphosphate reductase large chain family.</text>
    </comment>
    <dbReference type="EC" id="1.17.4.1" evidence="5 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370559.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21775"/>
    <dbReference type="EnsemblBacteria" id="ADO55942">
        <property type="protein sequence ID" value="ADO55942"/>
        <property type="gene ID" value="PPSC2_09305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1960"/>
    <dbReference type="eggNOG" id="COG0209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000404_4_1_9"/>
    <dbReference type="OMA" id="RGSIQNI"/>
    <dbReference type="OrthoDB" id="357568at2"/>
    <dbReference type="UniPathway" id="UPA00326"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004748">
        <property type="term" value="F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013346">
        <property type="entry name" value="NrdE_NrdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026459">
        <property type="entry name" value="RNR_1b_NrdE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000788">
        <property type="entry name" value="RNR_lg_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013509">
        <property type="entry name" value="RNR_lsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013554">
        <property type="entry name" value="RNR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008926">
        <property type="entry name" value="RNR_R1-su_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039718">
        <property type="entry name" value="Rrm1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11573">
        <property type="entry name" value="PTHR11573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02867">
        <property type="entry name" value="Ribonuc_red_lgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00317">
        <property type="entry name" value="Ribonuc_red_lgN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08343">
        <property type="entry name" value="RNR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01183">
        <property type="entry name" value="RIBORDTASEM1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48168">
        <property type="entry name" value="SSF48168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02506">
        <property type="entry name" value="NrdE_NrdA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04170">
        <property type="entry name" value="RNR_1b_NrdE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00089">
        <property type="entry name" value="RIBORED_LARGE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="9" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 10" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 10 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RIBORED_LARGE" evidence="11">
        <location>
            <begin position="552"/>
            <end position="574"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="694" mass="78995" checksum="4CD55BC95A921849" modified="2011-01-11" version="1">MRHIELNNMLMKRDTDGFFQLEKDQEAVAEFMKEVQERSLKFADTAAQVLYMIENDYYENFYNSYTADEINDIFHITHSYNFKFPSYMAASKFYTDYAMKSNDRKVYLEHYPDRVAAVALHLGRGNADTARLLSRSMMEQRLQPATPTFLNAGKSRRGELVSCFLLEMDDSLNSINYVLNTCMQLSKIGGGVAVNLSKLRSRGEAIKGVEGAAKGIMPVLKLMEDGFSYADQMGQRKGSGAAYYNIFGWDVLEFLDSKKINADERVRLKTLSIGLLVPNRFYKLAQDNEPLHVFAPYSVFKAYGTHLDDMDLDEMYDTLLADDRVKKKIAMSARDMLTKIAMIQLESGYPYIMNKSNANQAHALKNVGQIKMSNLCTEIFQLQETSEIADYGQQDIIRRDVSCNLASLNIVNVMEHGKIRESVHEGMIALTSVSDMTQVANAPGVAKANREMHSVGLGVMNLHGYLAKNKIAYESNEAKDFVRTFFMTMNYHSIEKSMEIAKAAGQSFYGFEESDYATGVYFDRYLNTDYRPTTARVQELFKDIYIPTQADWDTLKADVMKNGLYHAYRMAIAPTASISYIQNATSSVMPIVEQIETRTYANSTTYYPMPYLQKDNVFFYKSAYQMDQFKVLDLIAEIQPHVDQGISTVLHVNSDVTTRQLARCYLYAAHKGLKSLYYTRTKKLSVEECLTCSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIU1</accession>
    <name>E3EIU1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional crp fnr family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09380</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21850"/>
    <dbReference type="EnsemblBacteria" id="ADO55960">
        <property type="protein sequence ID" value="ADO55960"/>
        <property type="gene ID" value="PPSC2_09380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1977"/>
    <dbReference type="eggNOG" id="COG0664">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075053_9_1_9"/>
    <dbReference type="OMA" id="NKERFML"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0010">Activator</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="24"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="22861" checksum="DB566016D57EE055" modified="2011-01-11" version="1">MQLYYRSLENMAHQASIIDQDWNRFVEQTRVRHVQQGTYLIETGEPVKHAYFCSEGLFRLFYTLADGREYNVGFSPEDDYVTSYGAMVQGKPSTFTIEAMEDSVVIEIPYYVLKELMDTSHMWERFVRKSVERLYIRKEERERELLYLSARERYDAFLLKYPGLDKRVAQYHIASYIGVSPVSLSRLLRSKPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJC3</accession>
    <name>E3EJC3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">PhoB family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ykoG3</name>
        <name evidence="9" type="ORF">PPSC2_11465</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371015.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23830"/>
    <dbReference type="EnsemblBacteria" id="ADO56410">
        <property type="protein sequence ID" value="ADO56410"/>
        <property type="gene ID" value="PPSC2_11465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2424"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_1_9"/>
    <dbReference type="OMA" id="LMEHKNQ"/>
    <dbReference type="OrthoDB" id="1020672at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="4"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="136"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="136"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="27318" checksum="706DAB5299683440" modified="2011-01-11" version="1">MDKSVLVIDDEEKISRLLQLELSHEGYVVEIAQTGREGLEKALAHTWDIIILDVMLPEINGVEVLKQIRKVDNHTPIIMVTARNTTPDKVSGLDEGANDYITKPFEIEELLARMRASMRNQLEPAATASPKEDKQQSKLQVDSLVLEPKTRSVVREGKRIELTPKEFDLLLYLMEHKNQVLHRDQMIQDVWGFDFVGDTNVVDVYIRYVRKKIDHGYKKKLIKTVRGVGYCIREEDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJH0</accession>
    <name>E3EJH0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore gernimation protein KA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gerKA2</name>
        <name evidence="4" type="ORF">PPSC2_11970</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371124.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24290"/>
    <dbReference type="EnsemblBacteria" id="ADO56520">
        <property type="protein sequence ID" value="ADO56520"/>
        <property type="gene ID" value="PPSC2_11970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2535"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021639_4_1_9"/>
    <dbReference type="OMA" id="IFREFRI"/>
    <dbReference type="OrthoDB" id="576172at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004995">
        <property type="entry name" value="Spore_Ger"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03323">
        <property type="entry name" value="GerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005690">
        <property type="entry name" value="GerBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="318"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="412"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="445"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="506"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="507"/>
            <end position="524"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="539" mass="59530" checksum="B724D8735527D3B9" modified="2011-01-11" version="1">MLTRWIRSVLKPGKRYTQDIEKSKQQTATDPIHSSLSHTLSLLKLKLGQGPDFVIRDFSESPVHAGHLAVCYIEGLIDQNLLSDLMESLITEMGSADTFMFKENTAASLLKNTIPSGNIQMIHSQNEVYQAILSGNAVIVIDGNNYALVVSIAGGVRRAIQEPSTQTVVRGPKEGFTEDISTNITLIRRKLRTPDLKFESHVIGRYTQTKVMLAYIENVANPEVIQEITKRLQSIDTDSILESGYIEEFIQDEPLSLFPTMLNSERPDTVAGSLLDGQVAVLVDGTPFALIAPVTFFNFFQTAEDYYQRYDISTFLRALRVVSFLVSLLLPSLFIALTTFQQEMIPTTLLITLMAQREGTPFPALLEALMMELMFEVIREAGVRMPRVIGPAVSIVGALVIGQAAVQAGLVSGAMVIVVAFTAISNFVIPYFAMASAVRLLRFALMLLAGALGLFGILIGIIPLLIHLVSLKSFGVDYFVPYSPTFKTNMKDLIIRVPWWAMKTRPSEKSGHNQTRQAAHQYPASSDDTEGGHKPDTQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJL8</accession>
    <name>E3EJL8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Amidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gat</name>
        <name evidence="3" type="ORF">PPSC2_12215</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371172.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24570"/>
    <dbReference type="EnsemblBacteria" id="ADO56568">
        <property type="protein sequence ID" value="ADO56568"/>
        <property type="gene ID" value="PPSC2_12215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2583"/>
    <dbReference type="eggNOG" id="COG0154">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009600_15_0_9"/>
    <dbReference type="OMA" id="SGWAFDD"/>
    <dbReference type="OrthoDB" id="1239251at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168483" evidence="1">
        <location>
            <begin position="38"/>
            <end position="722"/>
        </location>
    </feature>
    <feature type="domain" description="Amidase" evidence="2">
        <location>
            <begin position="82"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="722" mass="78677" checksum="4E93CEF9A9BE8FD0" modified="2011-01-11" version="1">MRARTLKASTRNVIGSYYKWIAAGMIVTLTGCSLASAAPSPSLSSSSKTSEPTSSLVTFQLQEATIAQMQDAMKSGALSSVELTAMYLNRVYAYDSSGIRLNSIPVLNPDVLKEAAQADQQRAQGINTGPLQGIPYTVKDSYKVKGLTVASGSPAFKNLMAKDDAFTVEKIRKSGGVLIGKTNMPPMAAGGMQRGVYGRAESPYNPDYLAAAWYSGSSNGSGVSTAANLAAFGMGEETVSSGRSPASNNGLIAYTPSRGLISIRGNWPLFPIRDVVVPHTRTVEDMLRLLDVIVVEDKITKGDFWREQKAVRLPSVNSVRPNSYLELRDTQALKGKRIGVPKIYIGKDSETTTPIKFRPSIQALWEKAVKDLTALGAEVVEVDFPLQVNSEKDRPTAKTPEERGLMPAKWAEKEFGLLNPYVAEEFLKSVGDPNFPSWANIDPATVFPNPPGSVDAKRGRDLGHYDVFIDTIKKGVTPYEQIPQFQEGLRGLENVRKIDFENWMKQNNLDFIVFPANSNIGKADSDVNETSYEEAWENGNYFSNTNFLLREYGIPSVSVSMGAMKDTGMPVNLTMAGAAYSDNDLLRYAYSYEQATKNRPIATRTPALEDETFSYNPQTALPPSKRKETEAPALKLNASLKGDILALKGSVTDQSEIAQLKVYVNGMRVAITEDKANWSATLPTAIYKQSGASQADTLHILLLAKDIYGNTSAQIKSVTLPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJR0</accession>
    <name>E3EJR0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386072.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59658">
        <property type="protein sequence ID" value="ADO59658"/>
        <property type="gene ID" value="PPSC2_26835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5672"/>
    <dbReference type="HOGENOM" id="CLU_1223759_0_0_9"/>
    <dbReference type="OrthoDB" id="142817at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="226" mass="26587" checksum="81D4FAD0EF3E4A46" modified="2011-01-11" version="1">MNKAFFKWFKQSKAIDVGGKPQIFFHGSIQEFSVFDTSRIRANETDALYNGFWFSSNKDDASPAWSDPKYVNAYYLSVQKPAPHTVIKELFKEIKADEQSYSKFSIEKGFRSWADVVRFELQVMGYDGVIHRDIPEINRKEFEEKGETVYNSNRCFQYKLKKHDDLGGVDLYRIQCGREDYITGYEDLKDFLHQHSERVFVVFKPSQIKSIHNEGSWCPDHNDVRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJW4</accession>
    <name>E3EJW4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386397.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0594"/>
    <dbReference type="EnsemblBacteria" id="ADO59983">
        <property type="protein sequence ID" value="ADO59983"/>
        <property type="gene ID" value="PPSC2_28265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5993"/>
    <dbReference type="HOGENOM" id="CLU_2736282_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="71" mass="8368" checksum="585E70C2F31DA5F7" modified="2011-01-11" version="1">MTNMLRSQIEYWFNSKTLLTIKILNAKGKEESLHGRIISYEPESNNILFYEDDFKRVDNILLSEILNVETS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJY9</accession>
    <name>E3EJY9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386422.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0619"/>
    <dbReference type="EnsemblBacteria" id="ADO60008">
        <property type="protein sequence ID" value="ADO60008"/>
        <property type="gene ID" value="PPSC2_28145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5967"/>
    <dbReference type="HOGENOM" id="CLU_2495005_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9990" checksum="723542DC0638D200" modified="2011-01-11" version="1">MHNIENGLGTEKIKTNEPESLDDLLQQMEENSERNDFSDEYLLENGHCLPAIGEYSYGVSYTPTAWVLPYLRELKKLKEKEAVREK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKA8</accession>
    <name>E3EKA8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385849.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0041"/>
    <dbReference type="EnsemblBacteria" id="ADO59435">
        <property type="protein sequence ID" value="ADO59435"/>
        <property type="gene ID" value="PPSC2_27885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5909"/>
    <dbReference type="HOGENOM" id="CLU_1015062_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="32059" checksum="A319BBE23E147703" modified="2011-01-11" version="1">MTFFIKSKLHLDEFFKVLQSKKMKPLKISENELSVTCKQRNALELELASFLSHYLFVKTVKEALQTLMFEESFKTTFLEESLEYFETSSYWKNISLILVAEYFQNSKTINIDSFMLFNMKGFKQEVQEYVRYATAEWDEEEETYIYDDKIRNLFTELRSHISHLDTSVYETIHLFGKGDTVKFQTSAGMIVDEKHLNHILGEEDIIQVQGSMDAWEKEVLLFPALVMILSVKKLIVHVNVMDEVRSALERSKQMFPPDIVVMIENCTGCGRCDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKG0</accession>
    <name>E3EKG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386206.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0402"/>
    <dbReference type="EnsemblBacteria" id="ADO59792">
        <property type="protein sequence ID" value="ADO59792"/>
        <property type="gene ID" value="PPSC2_26200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5517"/>
    <dbReference type="eggNOG" id="COG0175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_335500_0_0_9"/>
    <dbReference type="OMA" id="KESINWW"/>
    <dbReference type="OrthoDB" id="499077at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="850" mass="98735" checksum="E108D068E16BA92C" modified="2011-01-11" version="1">MQIQSDKKELDYIEPIIEQLVEAYLDPRHLFPWFVANSNGKDSSTLSYCVWKAVERVAVEDRKRKVYFATTDTLLEHPHMKELMEFSFRNMNEVAKAKQLPIEAFLVKPKMTAVMKMIAHGNPLPTPKSSINRWCTDLLKLKPMEEIQSRLIQEHGAIILMLGVRSDESQKRSGSIKKHSIFGEFIFPKVGAKENPSGFFDKYMSHPIVDLSDEEVWRTITYARILPWGTKATTIRKMYEGAGECPIQVDKQSSKPCGGTSRNGCMICMMTTSQDDKMLQSFIDKGEEWAIHMNRLRKLIRESLFDARFRRPVNTWRKNKLDWVNPFIQNYDEKNDEWKTAKKKKASREEFHQQFESEQENFNRMSEGLCFDSKPVYPNLSLAGYTLQARIFLLKAFLYTQEVSGVKLVSEEELMYIKKIWADECGWLENEEDLKPEFPVYPGSLVLNPDYTVNIEETTIPNLTLYGKVVDHETGFGMIIPPIENKKLTPSPRKRRKMTKAEELAMLTMPTPKTINLDPTQKEHHEAFYILQDWGYDEETIVAQCEQSSVRTGVYLPYYWLPAYNVEKRFDWSKLGTRDHVVYWNTVVFIVCDPKIKTYEEASSYVNWYIDQAGKPQTLKEANGDHLYVKQYGGLSPVVAKREMLKNGEDPDIIPVELKKYVGVTDIELMTARVMRYYGNNEQLVEAYLKGETWDSVNQMIIAGMMPHEAKLFLLYQAYLPHVLTKNVKAYAGMADENLQKAHKLRYRDGSKGKAFWSHFHLADLVKDMDSKEITLFLLQNDYDNSDIPKEVAQFVKIDEKVWSFIRSLRKRGMPLEQVQKALDLLIVKHDELESTEEVSYVHMEFDISA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELA1</accession>
    <name>E3ELA1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF6036 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386347.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0544"/>
    <dbReference type="EnsemblBacteria" id="ADO59933">
        <property type="protein sequence ID" value="ADO59933"/>
        <property type="gene ID" value="PPSC2_28510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6049"/>
    <dbReference type="HOGENOM" id="CLU_1576403_0_0_9"/>
    <dbReference type="OrthoDB" id="260408at91061"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045792">
        <property type="entry name" value="DUF6036"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19502">
        <property type="entry name" value="DUF6036"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6036" evidence="1">
        <location>
            <begin position="3"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="19451" checksum="7931F9C150F0A422" modified="2011-01-11" version="1">MNTVNEVMENFLMADQFIKQVFPNLDRLELVVVGGASFLLKGFDNKFTLDIDTITQLDSDVLDYLESFSINNASSEVITLSETYYERTVALPSQCKVLDLRMLCNEDLVLAKVGRSKRSDIDDILETGILYETNLELLNTIATELESKNYDNFKNKWEDFKRTVLYSFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC36</accession>
    <name>A0A0D5ZC36_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599589.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1615"/>
    <dbReference type="EnsemblBacteria" id="AKA44203">
        <property type="protein sequence ID" value="AKA44203"/>
        <property type="gene ID" value="PPSC2_07700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1597"/>
    <dbReference type="HOGENOM" id="CLU_2845719_0_0_9"/>
    <dbReference type="OrthoDB" id="1807259at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="YunC_sf"/>
    </dbReference>
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        <property type="entry name" value="SSF102891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="7486" checksum="5D350DA59C3F792C" modified="2015-05-27" version="1">MIHIEPIQVGEHTFIGVEVKLPKTTLLTISNSRGYIMCGASKMYRIRGSEIFRCLSRKFKRDKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCC0</accession>
    <name>A0A0D5ZCC0_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
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    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillus</taxon>
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    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0115"/>
    <dbReference type="EnsemblBacteria" id="AKA44385">
        <property type="protein sequence ID" value="AKA44385"/>
        <property type="gene ID" value="PPSC2_27550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5834"/>
    <dbReference type="HOGENOM" id="CLU_1784985_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
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        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16628" checksum="E66EB573777E4C21" modified="2015-05-27" version="1">MKRNQAPQEHPIVSLFTLYSMPISAMLLTMTMYVIKATTNLHMELNSVWSTFVLVAVVTMLNPLTFLIEIPMSILSERILSIPAFVFRFISKTMELLLLVWLIHQIDGAIEAVELSMYGQITFAFLLHLITAWMTYSTSQVKEQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCM6</accession>
    <name>A0A0D5ZCM6_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44363">
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        <property type="gene ID" value="PPSC2_26790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5663"/>
    <dbReference type="HOGENOM" id="CLU_2918389_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="7242" checksum="D74B18423225AC7F" modified="2015-05-27" version="1">MNNVVVCTDNSYTWRNKLTIGKEYEVIRSFPDPHADYSMFEIKCDDSEVSVYRANRFKEQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCN8</accession>
    <name>A0A0D5ZCN8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_27525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
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    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
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    <dbReference type="EnsemblBacteria" id="AKA44383">
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        <property type="gene ID" value="PPSC2_27525"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.5826"/>
    <dbReference type="HOGENOM" id="CLU_2506220_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
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    </dbReference>
    <dbReference type="GO" id="GO:0016021">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="10593" checksum="31252F5B2FD8027E" modified="2015-05-27" version="1">MFFLGLTFCFIAWIAGIICMMQGNLMWGSIIFCIGVILLIIMVLYYKKKEVRKEDLSVKGTSAPMWFDCYPVPDCDDAPDCDAAPDCHGAPDCTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCS0</accession>
    <name>A0A0D5ZCS0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PPSC2_26510</name>
    </gene>
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        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Paenibacillus</taxon>
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        <name>pSC2</name>
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    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
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    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44356">
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        <property type="gene ID" value="PPSC2_26510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26510"/>
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    <dbReference type="HOGENOM" id="CLU_2013027_0_0_9"/>
    <dbReference type="OrthoDB" id="1938794at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="14041" checksum="1610A33D1642A6BE" modified="2015-05-27" version="1">MRLLIIEDDDHKADKVSHSLEGHVFERARSYNTGLRNVLGKKTVYDRVILDMGLPKFDDGNCYEANCGLLILEEMRRNKIKLPVLIHSSNQFDISNFPNVLGYIVASNDSIVKEVNDFIFLIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E474</accession>
    <name>E3E474_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fruR3</name>
        <name evidence="7" type="ORF">PPSC2_12415</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56614.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025677743.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00105"/>
    <dbReference type="EnsemblBacteria" id="ADO56614">
        <property type="protein sequence ID" value="ADO56614"/>
        <property type="gene ID" value="PPSC2_12415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2633"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_0_9"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="3"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="HTH cro/C1-type" evidence="6">
        <location>
            <begin position="7"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56614.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="36776" checksum="32BC57F1E881F1AE" modified="2015-05-27" version="2">MKPKLNDVAQLAGVSPTTVSRVLNNRGYISQETKDQVHKAMQELNYFPNDVARSLFSKRTNLIGLIIPTTSNPFFGELTFHIENICASLGYKLLLCNSLNQLDKEESYVDMLMRNQVDGIIVGTHNRGIVNYEQKNIAVIAIDRFLSDSIPVVGSDNYLGGKLASELLIEKGCKHIFHINGPVELETPASLRRKAYEDVMEQYGRKAITYEVHDPFHQQNHNEPIKRLLDEHPEVDGLFASNDMVAASFIAEARRRGKRVPEDIRVIGYDGTETTRNLLPELTTIQQPIQEIARSSIELLIKEIEGGFSDVPRETYLPVKLIEASTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E486</accession>
    <name>E3E486_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12480</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371230.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00380"/>
    <dbReference type="EnsemblBacteria" id="ADO56626">
        <property type="protein sequence ID" value="ADO56626"/>
        <property type="gene ID" value="PPSC2_12480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2646"/>
    <dbReference type="eggNOG" id="COG1073">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034451_1_0_9"/>
    <dbReference type="OMA" id="AEFCKIT"/>
    <dbReference type="OrthoDB" id="721431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010520">
        <property type="entry name" value="FrsA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06500">
        <property type="entry name" value="FrsA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="388" mass="44069" checksum="D5E35E98D89BC9C3" modified="2011-01-11" version="1">MSIEFSRWPNNYMMSYQVTKALGMASLGATDVTEIYEACKKIDPNDKETWHREWLITAEALERHGKEAEAFGNWYTARNCYIRACNYHRIAEYAVMDNDTEKIRIFRKVNELFEAAGKYFDVKPEKIQVDYEDVKLDGYFFSPSWIKGPKPTILALNGGDEWSIENYFWLGPAFISCGYNFMVYDQPGTGLSMYEKGKGRRADSEAFHSRAIDFLLTRPEVDPSKIIVHGESFAAYDSLRFASFDHRIAAVISDGGTHAFDWEAMLKWMPPSLAAHGMRILGAKSLDDFAENPRFAYNLEGVLHQIECPLLVMHGAEEILVQPNPLTQALKNYEQAGSKNKTFFAIEDRRLGGLEHCQVDNINVLHEVVLNWLCSVGLGPSAPRPSDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4I4</accession>
    <name>E3E4I4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Acid sugar phosphatase</fullName>
            <ecNumber evidence="3">3.1.3.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nagD</name>
        <name evidence="5" type="ORF">PPSC2_13690</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the HAD-like hydrolase superfamily. NagD family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56883.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01380"/>
    <dbReference type="EnsemblBacteria" id="ADO56883">
        <property type="protein sequence ID" value="ADO56883"/>
        <property type="gene ID" value="PPSC2_13690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2912"/>
    <dbReference type="eggNOG" id="COG0647">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043473_1_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006357">
        <property type="entry name" value="HAD-SF_hydro_IIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006354">
        <property type="entry name" value="HAD-SF_hydro_IIA_hyp1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13344">
        <property type="entry name" value="Hydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000915">
        <property type="entry name" value="PGP-type_phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01460">
        <property type="entry name" value="HAD-SF-IIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01457">
        <property type="entry name" value="HAD-SF-IIA-hyp2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR000915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000915-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56883.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="269" mass="28838" checksum="50B3D9F94E13D1D3" modified="2015-05-27" version="2">MGEGIAIKSLLIDLDGTLYHGNRMIKGADLFISRLRSEQIPYAYVTNNASRTPESVAEHLIGMGIEAASHEVYTSALAAAQYVAQQSPGALVYCIGETGLREALTGAGLQLVQNHPDYVVQGIDRQFTYETLAAAMRWIREGATFILTNPDLQLPSHDGLTPGAGTIGAAIEAASQVKPIVIGKPSSVLMNYALNRLNIRADEALVVGDNMLTDIAAGAAAGCKTALILSGVTTRANMDEHIRAVGVKPDLMFENLDELQEWMKEELKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4W4</accession>
    <name>E3E4W4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Stage IV sporulation protein A</fullName>
            <ecNumber evidence="1">3.6.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Coat morphogenetic protein SpoIVA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoIVA</name>
        <name evidence="2" type="ORF">PPSC2_14670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">ATPase. Has a role at an early stage in the morphogenesis of the spore coat.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371689.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02315"/>
    <dbReference type="EnsemblBacteria" id="ADO57092">
        <property type="protein sequence ID" value="ADO57092"/>
        <property type="gene ID" value="PPSC2_14670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3130"/>
    <dbReference type="eggNOG" id="COG5019">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043635_0_0_9"/>
    <dbReference type="OMA" id="RMPENAQ"/>
    <dbReference type="OrthoDB" id="241008at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030435">
        <property type="term" value="P:sporulation resulting in formation of a cellular spore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014201">
        <property type="entry name" value="Spore_IV_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09547">
        <property type="entry name" value="Spore_IV_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007466">
        <property type="entry name" value="SpoIVA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02836">
        <property type="entry name" value="spore_IV_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0749">Sporulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR007466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="492" mass="55186" checksum="D81C4B7F1EF0A76E" modified="2011-01-11" version="1">MEKVDIFKDIAERTGGDIYLGVVGAVRTGKSTFIKRFMETIVLPNITSEADRARAVDELPQSAAGKTIMTTEPKFVPNNAVQIKVTEGLDVNVRLVDCVGYAVEGAKGYEDENGPRMISTPWFEEPIPFQEAAEIGTRKVIQEHSTLGVVVTTDGTIAEIPRSSYVESEERVIEELKEVGKPFVLVINSTHPRSDETLQLRSELAAKYDIPVMTLSAATMTEDDVTGVLREVLYEFPVHEVNVNLPSWVMVLNENHWLRSNYENSVRDTVKDIRRLRDVDRVVGQFMEYEFIDRAGLSGMNMGQGVAEIDLYAPDELYDQILVEVVGVEIRGKDHLLQMMQDFAHAKREYDRFAEALEMVKTTGYGIAAPSLAEMALDEPQLIRQGTRFGVRLKATAPSIHMIRVDVESEFAPIIGTEKQSEELVRYLMQDFENDPIKIWESDIFGRSLHSIVREGIQGKIAMMPDNARYKLQETLGRIINEGSGGLIAIIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z3</accession>
    <name>E3E4Z3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fe3+-citrate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fhuD7</name>
        <name evidence="4" type="ORF">PPSC2_15175</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371792.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02795"/>
    <dbReference type="EnsemblBacteria" id="ADO57201">
        <property type="protein sequence ID" value="ADO57201"/>
        <property type="gene ID" value="PPSC2_15175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3240"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_10_1_9"/>
    <dbReference type="OMA" id="AVLEWQQ"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168618" evidence="2">
        <location>
            <begin position="28"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="3">
        <location>
            <begin position="65"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="179"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="333" mass="35817" checksum="6060E18E1A8E8246" modified="2011-01-11" version="1">MKKGFIGFLLLLTFMLTLAGCGATDNAANKGQTATSGSKPTEAATGPVTVKHNRGELTLDKPAQRVVVLEWTFTEDLIALGVQPVGNADNANYKVYVTPEAALDSNVVDVGTRNEPNLEAIAALKPDLIISNFDGNEAIYEQLKAIAPTIEYNLNDGNGYDYDKMVEIFNSIAVALGKEDKAKQVLADLDQHYAEAKQKLAAADKSDFHFILTQAFTSQNAASLRMFSDNSVVVGTLAKIGLVNDWKPSKVESYGFSTVGIEALSAVQDSNFIYIVQPDDNVFGSSMKNNSVWNGLKFVKEKRTYPLASTTWTFGGPVSSKGLVDGVVGAITQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E557</accession>
    <name>E3E557_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372003.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3460"/>
    <dbReference type="EnsemblBacteria" id="ADO57417">
        <property type="protein sequence ID" value="ADO57417"/>
        <property type="gene ID" value="PPSC2_16195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3458"/>
    <dbReference type="eggNOG" id="ENOG5033XHX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_151921_0_0_9"/>
    <dbReference type="OrthoDB" id="1847037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="15309" checksum="46A0FF17D186D1A7" modified="2011-01-11" version="1">MLNEALKLIKEQTKDSIDARDTERATLLSWPGSPSIEVDGDPAPYPADKLVFADYLLDREVKADFIAAEYLEGDEAKGSVTGVLANGVVYETGEPYKQTPRSSLRGKLVIPSPLQAGDRLIVSRLSGQRYYVHGKDVGGNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E588</accession>
    <name>E3E588_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372034.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3492"/>
    <dbReference type="EnsemblBacteria" id="ADO57448">
        <property type="protein sequence ID" value="ADO57448"/>
        <property type="gene ID" value="PPSC2_16345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3489"/>
    <dbReference type="HOGENOM" id="CLU_1309135_0_0_9"/>
    <dbReference type="OMA" id="ENGMSAY"/>
    <dbReference type="OrthoDB" id="2116842at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="21696" checksum="475DD2586083E8D3" modified="2011-01-11" version="1">MAQIRIAELDRALKDVAGKRADVSPEEFKKTEYLLSINPQIVRIVRDYEFAVKSSISLKSYEGSKGHVRQTKAVILKYKRPELYFLFKTLTQIIQSSINNLVNPYERTILELLYIKGARYLVAQSYMGKGYRNDMYPISGSTFAERRREAIKKIAHSFQILGLLELVQAEYRIGELSNLQFLELRPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D7</accession>
    <name>E3E5D7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">betI7</name>
        <name evidence="3" type="ORF">PPSC2_17285</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372237.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04635"/>
    <dbReference type="EnsemblBacteria" id="ADO57656">
        <property type="protein sequence ID" value="ADO57656"/>
        <property type="gene ID" value="PPSC2_17285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3694"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_17_2_9"/>
    <dbReference type="OMA" id="VNMHQIA"/>
    <dbReference type="OrthoDB" id="2047542at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="17"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="23245" checksum="8886A1F12C45BEF1" modified="2011-01-11" version="1">MVNSESQSVSLKIPREELNRRRILAAARELFIKNGVYNVNMHQIAKTAGVGQASLYRRYSDKGDICQEIAYEEYQPLFDEVQAFLDQSPETAALDRLYHVIVRYVSFLEAKVPWLCEVSRASTGHRPLQSPLCQWMRNISRNLLNEAVEQGDVSGVDISYTIEALLAVLHNIDYHLQDEGFTSQRVLDGLHRIFIEGLRANRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F4</accession>
    <name>E3E5F4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YrhD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yrhD</name>
        <name evidence="1" type="ORF">PPSC2_17385</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372254.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04725"/>
    <dbReference type="EnsemblBacteria" id="ADO57673">
        <property type="protein sequence ID" value="ADO57673"/>
        <property type="gene ID" value="PPSC2_17385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3714"/>
    <dbReference type="eggNOG" id="COG2427">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_102904_1_0_9"/>
    <dbReference type="OMA" id="INHVIGM"/>
    <dbReference type="OrthoDB" id="1925714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012440">
        <property type="entry name" value="DUF1641"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07849">
        <property type="entry name" value="DUF1641"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="17449" checksum="7F78C0AB6B12E1BA" modified="2011-01-11" version="1">MAKPISIVRKRILTAEERQKQSLDQLTADLADNGAALQKTLEIVRELHDSGLLEAAQSMLKAKETIAKIAVGQATRKPVTNMINNLMGAAGMLSEVDPGLMKKLANSVTTGLNEAEEHLKQNKKTRLRDLMKAMNDPDVNRAMGFGIHFLKGMGKGLSDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N1</accession>
    <name>E3E5N1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yurM7</name>
        <name evidence="7" type="ORF">PPSC2_18455</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57908.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886031.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05670"/>
    <dbReference type="EnsemblBacteria" id="ADO57908">
        <property type="protein sequence ID" value="ADO57908"/>
        <property type="gene ID" value="PPSC2_18455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3956"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_2_9"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="26"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="86"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="122"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="159"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="200"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="257"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="87"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57908.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="32782" checksum="ACF2E6E02BA0D16F" modified="2015-05-27" version="2">MKTQAAANYPLGVATRGKMLTRVGYAALYILLIILAVTQLLPLVWLMLFSLKNNQEVFNLPPFALPSQPHWENYMNVWTSGNIGRYFFNSVWITVISVALTVLLASFVTFAITRMRWKGSQLVLGLFMVGLMIPVHSTLIPLFSMFLKLHLTDTSVSIILSYVAFNLPTTMMILLGFYYALPREVEEAAVMDGCSVNRMFFRIVLPMTTPVMATTSIINMIYNWNEFIFVNTFISSDENKTLTVGVQNFIGQYTTDWGAIGATLMISILPILLVFLIMSDRIVEGIAAGSVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5P2</accession>
    <name>E3E5P2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Endonuclease V</fullName>
            <ecNumber evidence="1">3.1.21.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Deoxyinosine 3'endonuclease</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Deoxyribonuclease V</fullName>
            <shortName evidence="1">DNase V</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nfi</name>
        <name evidence="2" type="synonym">dna5</name>
        <name evidence="2" type="ORF">PPSC2_18510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate.</text>
            <dbReference type="EC" id="3.1.21.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the endonuclease V family.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.7" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372498.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3968"/>
    <dbReference type="EnsemblBacteria" id="ADO57919">
        <property type="protein sequence ID" value="ADO57919"/>
        <property type="gene ID" value="PPSC2_18510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3967"/>
    <dbReference type="eggNOG" id="COG1515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047631_1_1_9"/>
    <dbReference type="OMA" id="RIHFRQA"/>
    <dbReference type="OrthoDB" id="1681607at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043737">
        <property type="term" value="F:deoxyribonuclease V activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06559">
        <property type="entry name" value="Endonuclease_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00801">
        <property type="entry name" value="Endonuclease_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007581">
        <property type="entry name" value="Endonuclease-V"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28511">
        <property type="entry name" value="PTHR28511"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04493">
        <property type="entry name" value="Endonuclease_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1 2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="site" description="Interaction with target DNA" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="26394" checksum="07A16BA93673078D" modified="2011-01-11" version="1">MRHRKMEPIINHEWDLDEKEAVKLQQELSLKVTKEDRFPEIQYVAGVDVAYSEQSDLLVAAIVILDASSLQVVESIVVEDAVHFPYIPGLFSFRELPPIVKALKQIKTSPQLVVCDGQGIAHPRRFGLASHLGVIFDIPTIGCGKTRLWGEFEEPSQERGACSLLMDREEIIGRALRTQDNIKPLFVSVGHRISLETACNWILKLCPQYRLPETTRQADQLVRKALSQINQGSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W1</accession>
    <name>E3E5W1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">betI3</name>
        <name evidence="6" type="ORF">PPSC2_19790</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58180.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886140.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07010"/>
    <dbReference type="EnsemblBacteria" id="ADO58180">
        <property type="protein sequence ID" value="ADO58180"/>
        <property type="gene ID" value="PPSC2_19790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4218"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_40_3_9"/>
    <dbReference type="OMA" id="HGINAPA"/>
    <dbReference type="OrthoDB" id="1570162at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025996">
        <property type="entry name" value="TetR_C_WHG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13305">
        <property type="entry name" value="TetR_C_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="20"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58180.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="23780" checksum="BB7CE2CF51D1DA6C" modified="2015-05-27" version="2">MSEPSQPYRTYSEVKLQQQQLLRKNVIDAACILLVEEGPEAVTVRRVAQKLSCSTKIIYSIFGSKDGLANEMYLDGCRLLAETFQQVPVTQNVLADLEALCWAYWEFARLHSAYYKMMFGGALSDFKPDEQSLEGTTTALSRILQTVIHAMELGALKEQDPLLVVRMLWSALHGVIHLQFAGHFLTVDMAQEVYAFTLRNTLDVCKPSSSPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W4</accession>
    <name>E3E5W4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE7</name>
        <name evidence="2" type="ORF">PPSC2_19805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372755.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07025"/>
    <dbReference type="EnsemblBacteria" id="ADO58183">
        <property type="protein sequence ID" value="ADO58183"/>
        <property type="gene ID" value="PPSC2_19805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4221"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069129_1_2_9"/>
    <dbReference type="OMA" id="ACGKGRH"/>
    <dbReference type="OrthoDB" id="1515497at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="44"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="261" mass="29747" checksum="A2AAA5504002EE9B" modified="2011-01-11" version="1">MAEWYEQSFGEDYLLVYKHRDFQGAYQEVQKMISWLKLPQGSSVLDLCCGMGRHSLALADAGYKMTGVDLSNVLLREARAADSEGRVSWHQGDMRAVPLEESFDAVVNLFTSFGYFEKDEEQLKVLKEIYRLLKPGGRFIIDYLNPSYVAAHLVPHSSREDEGNWIEEHRVIEDGFVKKQIAIRSAASVTTTEAASELGTTHADAEPVRVYYERVKLYPYEKFRDLLEQAGLSVEQVHGSYDEDQYIEDASPRMIFVGVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y5</accession>
    <name>E3E5Y5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Iron permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ywbL</name>
        <name evidence="8" type="ORF">PPSC2_19900</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372776.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07120"/>
    <dbReference type="EnsemblBacteria" id="ADO58204">
        <property type="protein sequence ID" value="ADO58204"/>
        <property type="gene ID" value="PPSC2_19900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4241"/>
    <dbReference type="eggNOG" id="COG0672">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023979_0_0_9"/>
    <dbReference type="OMA" id="PVIMVKG"/>
    <dbReference type="OrthoDB" id="433945at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033573">
        <property type="term" value="C:high-affinity iron permease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005381">
        <property type="term" value="F:iron ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004923">
        <property type="entry name" value="FTR1/Fip1/EfeU"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31632">
        <property type="entry name" value="PTHR31632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03239">
        <property type="entry name" value="FTR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168181" evidence="7">
        <location>
            <begin position="36"/>
            <end position="609"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="358"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="388"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="422"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="462"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="500"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="527"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="583"/>
            <end position="599"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="609" mass="64848" checksum="1965CD92B38C9E13" modified="2011-01-11" version="1">MNRRNKSLGWMFVLVAALLLTVTPFISGSGSAAFAQSNAKAVSNDQLMPVVGGALVEAGQDQWTEASKDLKEFRGLWEAAKANGGDSAHIAAVDQALTDAEEALSHGGGDSAKAALSVLARSVNEFVTAAEGDKPAPAGAKAAEKLLPMAKGSLAAMQKGDWAAARVDYDRIVKAWYQVETPIRLDHFSVYSSLETKISLIRISMQAEPIRQAQALKEMQELTTLLSDYSQGKLANTDQGADAGNAAAGAANGSTASLGDAVTLLESARQDVVASQPEQAADKVGQFIALWPSVEGHVQISDPVSYTAIENQMTETSGYLLSSPPNRDKALQTLDQMLDRLHPLTEERSYTAWDATLILLREGLEAILVLAALLAYAKKSGEAVAGRWIWAGAGTGLVLSGILAVLFTSLVAAAASGSMRELLEGVTGLVAVVLMLTVGNWLHSKSNAAAWNRFVENSVGNALARGSLWSLFAVSALAILREGAETAIFYIGMAPAIETSQLLIGIGSATVILVVLAFAIIKFSVRLPIRAFFLTATVLIYYLVFRFLGESIHSLQVAGKLPGHTASSLPSISWLGMYPTWETFTPQALVLIFMVWQLVRQEIRSSKSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y6</accession>
    <name>E3E5Y6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Diaminopimelate decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lysA3</name>
        <name evidence="4" type="ORF">PPSC2_19905</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Orn/Lys/Arg decarboxylase class-II family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372777.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07125"/>
    <dbReference type="EnsemblBacteria" id="ADO58205">
        <property type="protein sequence ID" value="ADO58205"/>
        <property type="gene ID" value="PPSC2_19905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4242"/>
    <dbReference type="eggNOG" id="COG0019">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026444_0_3_9"/>
    <dbReference type="OMA" id="NADNPQE"/>
    <dbReference type="OrthoDB" id="861683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006596">
        <property type="term" value="P:polyamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022643">
        <property type="entry name" value="De-COase2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022657">
        <property type="entry name" value="De-COase2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022644">
        <property type="entry name" value="De-COase2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022653">
        <property type="entry name" value="De-COase2_pyr-phos_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000183">
        <property type="entry name" value="Orn/DAP/Arg_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002433">
        <property type="entry name" value="Orn_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02784">
        <property type="entry name" value="Orn_Arg_deC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00278">
        <property type="entry name" value="Orn_DAP_Arg_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01179">
        <property type="entry name" value="ODADCRBXLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01182">
        <property type="entry name" value="ORNDCRBXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="SSF50621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00878">
        <property type="entry name" value="ODR_DC_2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00879">
        <property type="entry name" value="ODR_DC_2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn_DAP_Arg_deC" evidence="2">
        <location>
            <begin position="21"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="Orn_Arg_deC_N" evidence="3">
        <location>
            <begin position="36"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="425" mass="46817" checksum="DF29BA63922293F9" modified="2011-01-11" version="1">MDQKDEVLLERFGEHPTPFYYYDGDALHAHVSSLLARLHPAVRVHYALKANGNVPLAGLLRSLGCGVEIASAGEMFVAMEAGYAAEDVLYAGPGKTIAELREAITCGIGCIHVESVRELRLLEDIAAQTGVFVRAAVRINPDNDLSGATIKMGGVPRPFGVDEGQLDHFFKVLEDCPHVYFQGIQVYTGTQMLKADQILASFANTLQLAERVQAQYSVAMHTINLGGGFGVPYFAHEQPLDMDHVIDGLNALAEQTRSRMPGVRLIIESGRYLVAQSGMYVCRALYTKKSKGEKFVVADGGMNHYVAATFRGRRLRDNYPVRIMRRQSAEVSTELETVSIVGPLCTPEDCIVKKAELPPIQEGDYIAFPNAGAYGLSYSPLYFLGHATPAELLDYRGKVHIIREHGDRTDLLHHQRMIALPEDVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Z5</accession>
    <name>E3E5Z5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Biotin carboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_19950</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Purine metabolism.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372786.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07170"/>
    <dbReference type="EnsemblBacteria" id="ADO58214">
        <property type="protein sequence ID" value="ADO58214"/>
        <property type="gene ID" value="PPSC2_19950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4251"/>
    <dbReference type="eggNOG" id="COG0026">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040535_1_0_9"/>
    <dbReference type="OMA" id="HERDHGV"/>
    <dbReference type="OrthoDB" id="1232897at2"/>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003135">
        <property type="entry name" value="ATP-grasp_carboxylate-amine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041356">
        <property type="entry name" value="PGM1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040754">
        <property type="entry name" value="PreAtp-grasp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02222">
        <property type="entry name" value="ATP-grasp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18105">
        <property type="entry name" value="PGM1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18604">
        <property type="entry name" value="PreAtp-grasp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="3">
        <location>
            <begin position="173"/>
            <end position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="458" mass="50368" checksum="82742375249F3A3C" modified="2011-01-11" version="1">MTTKTINLVEALAHERDHGVLIWLFNIGAEQVWHPSPRKGGMVDRDEQQVVNRMEEMNLLLCRSQDVIVLREQPDEAFLDMLQRLGFSLPRIEVPEPSDPLTPISELVLADDALLARLRAVADAGHSSGGAKAWLVPYAVTPQEEAIAERCGLELIGAPSAVCAQVNDKIFSRLTAQKLGFAVSEGAVCVDEAAIRRECERLAGLSDEPVKLIIKQPHGASGQGMYMLDELSKLDTLLSVMRRFGGSSSSSGGWLVERWHNKQMDLNYQLCIDEGGGVTMFSLKRQNVDGTVYIGSQVPADIGETLEEEVRRCAYQLGTYLYSIGYTGMASIDGFVDEDGLLIPVIEINGRFTLSTYISFLSSVLGERHKTLSRYYRNVTATPLTYSRLCGLLAEEGLLYTPERPEGVFVYTAGTLSGIPVKRGYVNRIFTLILADSWQEADAYAHKLEGIIAGLGCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Z9</accession>
    <name>E3E5Z9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glucosamine-6-phosphate deaminase</fullName>
            <ecNumber evidence="2">3.5.99.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">GlcN6P deaminase</fullName>
            <shortName evidence="2">GNPDA</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Glucosamine-6-phosphate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">nagB</name>
        <name evidence="4" type="ORF">PPSC2_19970</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>alpha-D-glucosamine 6-phosphate + H2O = beta-D-fructose 6-phosphate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:12172"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:75989"/>
            <dbReference type="EC" id="3.5.99.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-sugar metabolism; N-acetylneuraminate degradation; D-fructose 6-phosphate from N-acetylneuraminate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.5.99.6" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372790.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07190"/>
    <dbReference type="EnsemblBacteria" id="ADO58218">
        <property type="protein sequence ID" value="ADO58218"/>
        <property type="gene ID" value="PPSC2_19970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4255"/>
    <dbReference type="eggNOG" id="COG0363">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049611_1_1_9"/>
    <dbReference type="OMA" id="FNEPCSS"/>
    <dbReference type="OrthoDB" id="1828393at2"/>
    <dbReference type="UniPathway" id="UPA00629">
        <property type="reaction ID" value="UER00684"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004342">
        <property type="term" value="F:glucosamine-6-phosphate deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006044">
        <property type="term" value="P:N-acetylglucosamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019262">
        <property type="term" value="P:N-acetylneuraminate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01399">
        <property type="entry name" value="GlcN6P_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01241">
        <property type="entry name" value="GlcN6P_deamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006148">
        <property type="entry name" value="Glc/Gal-6P_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004547">
        <property type="entry name" value="Glucosamine6P_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018321">
        <property type="entry name" value="Glucosamine6P_isomerase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11280">
        <property type="entry name" value="PTHR11280"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01182">
        <property type="entry name" value="Glucosamine_iso"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00502">
        <property type="entry name" value="nagB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01161">
        <property type="entry name" value="GLC_GALNAC_ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glucosamine_iso" evidence="3">
        <location>
            <begin position="11"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for enolization step" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <feature type="active site" description="For ring-opening step" evidence="2">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for ring-opening step" evidence="2">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <feature type="active site" description="For ring-opening step" evidence="2">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="26218" checksum="558283DD3A095D7E" modified="2011-01-11" version="1">MNIRILNSRENLNATAATVIVSLLLSKPQAMLGLATGSTPIGIYRHLADMYCKGQVSFARAYSVNLDEYVGLSPEHPQSYRSFMNEHLFQHIDIPISHTRVPNGNALNLTAECAAHEQAILDHGPVDLQLLGIGHNGHIGFNEPGHSLTGATHVVDLKERTRSANARFFGDINAVPRQAVTMGVGTILKAKQIMLVAFGAEKADIIRQALTGPVTTECPASLLQCHPNVLILLDQEAGGWFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6A5</accession>
    <name>E3E6A5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Signal peptide protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_18750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372552.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05965"/>
    <dbReference type="EnsemblBacteria" id="ADO57974">
        <property type="protein sequence ID" value="ADO57974"/>
        <property type="gene ID" value="PPSC2_18750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4018"/>
    <dbReference type="eggNOG" id="COG1716">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089612_1_0_9"/>
    <dbReference type="OMA" id="SIKEWYI"/>
    <dbReference type="OrthoDB" id="1687028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00060">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00498">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SSF49879"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="FHA" evidence="2">
        <location>
            <begin position="96"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="20117" checksum="1D6D46DB3DA5947D" modified="2011-01-11" version="1">MKTAQSRWVFIIDVAMFGLMLAIAFYVFNRPGYSGLKTVVAIGIGISVLVYILRNLVSVVPVPRPKADRKRIAKLVLIDEEGESIKEWYIEGETSLLIGKTTSRSEADIDLAGTDYASLVSVEHAVLNRVNSDWFVEDVDSGNGTGLRSANESVTKKLESGEPYRIYSGDLLYIANTRLLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6C9</accession>
    <name>E3E6C9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Aminomethyltransferase</fullName>
            <ecNumber evidence="3 7">2.1.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">Glycine cleavage system T protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">gcvT</name>
        <name evidence="10" type="ORF">PPSC2_18855</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">The glycine cleavage system catalyzes the degradation of glycine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(6S)-5,6,7,8-tetrahydrofolate + (R)-N(6)-(S(8)-aminomethyldihydrolipoyl)-L-lysyl-[protein] = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + (R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:16945"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:10492"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="ChEBI" id="CHEBI:83143"/>
            <dbReference type="EC" id="2.1.2.10"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">The glycine cleavage system is composed of four proteins: P, T, L and H.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="3 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372575.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06065"/>
    <dbReference type="EnsemblBacteria" id="ADO57998">
        <property type="protein sequence ID" value="ADO57998"/>
        <property type="gene ID" value="PPSC2_18855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4042"/>
    <dbReference type="eggNOG" id="COG0404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007884_10_2_9"/>
    <dbReference type="OMA" id="MPVQYPA"/>
    <dbReference type="OrthoDB" id="282830at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019464">
        <property type="term" value="P:glycine decarboxylation via glycine cleavage system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00259">
        <property type="entry name" value="GcvT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006223">
        <property type="entry name" value="GCS_T"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022903">
        <property type="entry name" value="GCS_T_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00528">
        <property type="entry name" value="gcvT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GCV_T" evidence="8">
        <location>
            <begin position="18"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="9">
        <location>
            <begin position="285"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00031395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="366" mass="40479" checksum="5A8DC30DD7DDB167" modified="2011-01-11" version="1">MSNLRRTPLYSSYGTQPGVRCIDFGGWELPVQFSGIQKEHEAVRQRAGLFDVSHMGEFLVEGKEAEAFLQRVTTNDVSQLEPGQAQYSLLCYPDGGVVDDLLVYCKGPERYMLVVNASNIDKDWDWLIRHVPASVHLKNVSDAIALLALQGPEAARIAAAVTDTDITNLASFRFHENVQLFGAKALVSRTGYTGEDGFEFYIPAEEAPAVWDGLLRCGESYGLIPAGLGARDTLRFEARLPLYGQELSATISPLEAGLGFFVKLNKGDFIGREALQRQKEQGIPRKLIGLEMIDRGIPRAHYPVFAEGQHIGEVTTGTQSPTLKRNLGLALVDSRFSTLSTPLEVEIRGKRLRAEVVPAPFYKRLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6F6</accession>
    <name>E3E6F6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tar</name>
        <name evidence="2" type="ORF">PPSC2_18980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372602.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06190"/>
    <dbReference type="EnsemblBacteria" id="ADO58025">
        <property type="protein sequence ID" value="ADO58025"/>
        <property type="gene ID" value="PPSC2_18980"/>
    </dbReference>
    <dbReference type="GeneID" id="66576270"/>
    <dbReference type="KEGG" id="ppm:PPSC2_18980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4068"/>
    <dbReference type="eggNOG" id="COG0826">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011540_0_2_9"/>
    <dbReference type="OMA" id="YGGVSHF"/>
    <dbReference type="OrthoDB" id="1264653at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001539">
        <property type="entry name" value="Peptidase_U32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032525">
        <property type="entry name" value="Peptidase_U32_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01136">
        <property type="entry name" value="Peptidase_U32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16325">
        <property type="entry name" value="Peptidase_U32_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01276">
        <property type="entry name" value="PEPTIDASE_U32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_U32_C" evidence="1">
        <location>
            <begin position="360"/>
            <end position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="443" mass="50290" checksum="2D66F7D10D56AECB" modified="2011-01-11" version="1">MGTITKTRKYTGKRNRLDKPELLAPAGNLEKLKFAVHYGADAVYIGGQKYGLRSNADNFSFEEMREGVEFANKYGAKVLVATNIYAHNEDIAGIEEYLRNLYEVGIHAVIVADPAIVSVALRAVPGLEVHLSTQQSTLNWQAVKFWKDEGLPRVVLGRETSLEEIEEIKKHVDIEIEAFVHGAMCSSFSGRCVLSNHFTDRDSNRGGCCQSCRWKYDLFEDARPGEVWISEEEAQDNNVLKQFQLGVNQLPLFEESDNAFSMGSKDLCMIENIPDLIDVGVDSFKVEGRMKSIHYVATVVNVYRQAIDSYMADPENYVLKPEWIEEINKAANRPLNTGFFYDTPDHEDHIYEPEEKAVPYDFAGLVMDYDAASGIATIQQRNHFKPGHEIEFFGPNGTFFKQTVGTIWDEEGNELDAARHPLQRIKMKVDQPVSYFDMMRKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6P6</accession>
    <name>E3E6P6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Abortive phage infection protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">skfD</name>
        <name evidence="2" type="ORF">PPSC2_20345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="2 3">SC2</strain>
        </source>
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        <source>
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        <source>
            <dbReference type="EMBL" id="ADO58306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="576" mass="64575" checksum="6089054571BA8E54" modified="2011-01-11" version="1">MNPIGKPVVLTANFKKLGLLGGVGLICFFIFQLLIPSISNPSPESLMNAKVISKQEAVIHALDFARSELGYTESQPEKPVVTYQAETDLYGYLSREKLVQEYDRTWKKNYPYETFRVDLPDSSAKGKLQIHVDLSTGKVVSFKRITSSTNYTQADVSTDEQARSRLVRVAEGDMTLEAKEQAAAIWIKRFGFKPSELKLATTEGEGGLKYTVDEKKIGASVLTLAFTFEDGDVRSFTQSFSAPSSYTDYVKKQTYWANWMTYAGYALFSFVLGVLAIVYASLTRRHTSFVRGIILSIVYFIASIAGTMNMLPLLQAEAGSKGMLLFLMVFQVGVTFFMAVAIYFSLVGGDGLMRQVGLNAWPRAKEPGYGLYVLRSMYVGYLWAFILLGVQSILFFVLERTFNTFSTTDATQSPYNMAYPWLLPIMAWMAGIGEETVYRLFGIPMVKKIVKNTFVACLITTLIWALGHTLYPIYPVISRPIELTFLGLLFSFVFLRYGFIAAMFSHVIFDSILMGLSVISLGDTVNVSAGLFWILLPAIVGYIIYWFSPKKPNRIMFEPMKKEEPYSTTPPPEGQL</sequence>
</entry>
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    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
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    </feature>
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        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO58500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="13451" checksum="D3BFB84915DE1835" modified="2011-01-11" version="1">MVIVTNTSKITPGNAHLLIERFNKEGQVEKMEGFLGLEVLLTENTKDYDEVTISTRWKEKENFQGWTKSEAFRESHNHRQIPDYIIENKITFYEVKIVRHPIANNDSSLASEIEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E726</accession>
    <name>E3E726_PAEPS</name>
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        <submittedName>
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        </submittedName>
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    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
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                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
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        </location>
    </feature>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO58728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="8908" checksum="E6925A6A67728D10" modified="2011-01-11" version="1">MSKEQGLQDAHVKIGTKQTIRMVELGFASEVYVAEDADQRFTSNIIDLCNKHGVKVTLVDTMKNLGAACGIEVGAAMAAIVKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E765</accession>
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    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltraansferase</fullName>
        </submittedName>
    </protein>
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    </gene>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="18542" checksum="6ADE2BF283802906" modified="2011-01-11" version="1">MSGFIKLVPMNAEQYERFEQRSLADYAEEKIQAGTWTVEEAPERAKESFATYLPQRLGTPHAHLYMLEYSNSTGQGAKEAGYIWFNITESAQGKEAFLLDILVYDSYQGQGLGTLTMQALEQEARRLGAVRIGLHVFGHNERALHVYRKSGYRVTDIQMSKEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7B1</accession>
    <name>E3E7B1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ttgR</name>
        <name evidence="6" type="ORF">PPSC2_23585</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373502.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11090"/>
    <dbReference type="EnsemblBacteria" id="ADO58966">
        <property type="protein sequence ID" value="ADO58966"/>
        <property type="gene ID" value="PPSC2_23585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4993"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_40_3_9"/>
    <dbReference type="OMA" id="ADQIEYS"/>
    <dbReference type="OrthoDB" id="1570162at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025996">
        <property type="entry name" value="TetR_C_WHG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13305">
        <property type="entry name" value="TetR_C_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="12"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="23034" checksum="5F1513108C6E86ED" modified="2011-01-11" version="1">MKHIKRRERESSEIRRKIIEAARSLFLNQGYAEVSMRKIADQIEYSPTTIYHYFSNKEAVVRELLLEGNALFLKALQQRVDEAQAAGLNALDTLKTVSDAYVRFGMANPEYYNILFISNLESVSSVSLIDSGSFKGFELLEGGLKVAMEEGGIIQGDEHLMARSVWSMLHGLTSLLLNFELPMAKANNELISFTIDTFFRGLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8R4</accession>
    <name>E3E8R4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372353.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3819"/>
    <dbReference type="EnsemblBacteria" id="ADO57773">
        <property type="protein sequence ID" value="ADO57773"/>
        <property type="gene ID" value="PPSC2_17860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3816"/>
    <dbReference type="eggNOG" id="ENOG502ZP3D">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1904686_0_0_9"/>
    <dbReference type="OMA" id="PRANIGY"/>
    <dbReference type="OrthoDB" id="1899457at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="133" mass="15288" checksum="DA1EC6AA2415AB55" modified="2011-01-11" version="1">MSKKDKKEIQTLIYRYSGPRANIGYTFEPLRYGDTDEPKLEEMIFIYADDFDIVLSVLKSKYPLVDPDTGETSEAFDACWDNPIQASVWHEILTELDAWPAKEPELRIFIDSFTAWVRAHLKQADGIIVTGNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8S8</accession>
    <name>E3E8S8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sigma factor sigB regulation protein rsbQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvfQ</name>
        <name evidence="2" type="ORF">PPSC2_17920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372367.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05245"/>
    <dbReference type="EnsemblBacteria" id="ADO57787">
        <property type="protein sequence ID" value="ADO57787"/>
        <property type="gene ID" value="PPSC2_17920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3828"/>
    <dbReference type="eggNOG" id="COG0596">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_30_0_9"/>
    <dbReference type="OMA" id="VCPSPCF"/>
    <dbReference type="OrthoDB" id="1196738at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="21"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="30470" checksum="886BEDB3113ED5AD" modified="2011-01-11" version="1">MTVDILLRNNVKVLGTGSQTIVFAHGFGCDQDMWRYIVPSFIDNYQIVLFDYVGSGDSQIKYYDSKKYSDLQGYAQDVLDIMEVLDLRNTIFVGHSVSSMIGMLASIRSPQYFERIVMLGPSPRYVNDLPSYYGGFDKSDIDELLDMMQMNFIGWASYMAPIAMQNPERGNLTEELEKAFCSRDPHIARQFAEVTFFSDCRVDLQHASVPTLILQCSDDSIAPIEVGDYLHTHLRNSRLQQMRAKGHYPHLSQPGETSDLIKEYLASV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E905</accession>
    <name>E3E905_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Nickel transporter permease NikC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nikC3</name>
        <name evidence="7" type="ORF">PPSC2_24705</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373745.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12200"/>
    <dbReference type="EnsemblBacteria" id="ADO59212">
        <property type="protein sequence ID" value="ADO59212"/>
        <property type="gene ID" value="PPSC2_24705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5234"/>
    <dbReference type="eggNOG" id="COG1173">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028518_5_3_9"/>
    <dbReference type="OMA" id="YFWIWIN"/>
    <dbReference type="OrthoDB" id="1734230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="193"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="238"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="72"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="29937" checksum="C2E4C18EA685CDBB" modified="2011-01-11" version="1">MKKIRLSFRGSLLTGGALFGLIVLLGLLAPWAAPHDPLHVDLLNRLAPPSRKYPFGTDHLGRDVLSRLIYGIRTSVLIACAITVATLCISLPTGLLIGYVRGRVDQLIMRGIDGVLAFPDIILTVAIVGILGPGFVNMTLAIIAVRWAGYVRYIRSLVQKACQEDYVRYARLFGNSHVRILRRYVLPQVWPQLLVYTVWDIGRVVLMIAGLSFLGLGVQPPKPEWGVMLHDATSYFQVAPHVMIFPGLAIMLFVLACQLLGDHFSEKEAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E935</accession>
    <name>E3E935_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">slmA</name>
        <name evidence="3" type="ORF">PPSC2_24830</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373775.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5305"/>
    <dbReference type="EnsemblBacteria" id="ADO59242">
        <property type="protein sequence ID" value="ADO59242"/>
        <property type="gene ID" value="PPSC2_24830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5263"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_7_2_9"/>
    <dbReference type="OMA" id="HPAHAYE"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041478">
        <property type="entry name" value="TetR_C_27"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17935">
        <property type="entry name" value="TetR_C_27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="7"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="192" mass="21974" checksum="563BD294E8B31FC7" modified="2011-01-11" version="1">MEKSSDILTKEQILIATEDTLRRFGVAKSSVTDVAKVLGVSHGTIYRHFKSKAELLEGVTEKWLNEKIIDPLTEICQDSSVLGIPHLKRYIQTLIELKQYYARDDEEMFGMYTRVTEQAADLIDQHIAHIVDQLADIIARGGITVDQPTQLARTLFYATTRFHHPAHAYEWKSPAIEREFSEVWMLLEKGIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E977</accession>
    <name>E3E977_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polyketide biosynthesis enoyl-CoA hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pksI</name>
        <name evidence="2" type="ORF">PPSC2_15885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371936.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03580"/>
    <dbReference type="EnsemblBacteria" id="ADO57350">
        <property type="protein sequence ID" value="ADO57350"/>
        <property type="gene ID" value="PPSC2_15885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3391"/>
    <dbReference type="eggNOG" id="COG1024">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009834_7_2_9"/>
    <dbReference type="OMA" id="MHEKTFH"/>
    <dbReference type="OrthoDB" id="1275789at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27813" checksum="4140F56CB36832B5" modified="2011-01-11" version="1">MSQSVVELLELERGIIQVTMQDRVHKNTFTLEMTHGLREAFHTIQDDSTCKVVILTGYDNYFATGGTQEGLLAIHEGTSKFTDENIYSLALNCKVPVIAAMQGHAVGGGFVMGLFSDFVILGKESMYTTNFMRYGFTPGMGATFIIPQKLGFSLGEELLLNGGNYRGAELEKRGVPFPVLPRKEVMSYGLDLARQLAEKPRFSLITLKDHLVAPLRAQLPKIVEQELIMHEKTFHQAEVKERIINLFGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9I6</accession>
    <name>E3E9I6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yitL</name>
        <name evidence="3" type="ORF">PPSC2_17115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CvfB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372198.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04450"/>
    <dbReference type="EnsemblBacteria" id="ADO57617">
        <property type="protein sequence ID" value="ADO57617"/>
        <property type="gene ID" value="PPSC2_17115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3656"/>
    <dbReference type="eggNOG" id="COG2996">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064885_0_0_9"/>
    <dbReference type="OMA" id="GAFMDWG"/>
    <dbReference type="OrthoDB" id="1382881at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014464">
        <property type="entry name" value="CvfB_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039566">
        <property type="entry name" value="CvfB_S1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040764">
        <property type="entry name" value="CvfB_WH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37296">
        <property type="entry name" value="PTHR37296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17783">
        <property type="entry name" value="CvfB_WH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13509">
        <property type="entry name" value="S1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF012524">
        <property type="entry name" value="YitL_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="72"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="154"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR012524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="302" mass="34062" checksum="EA79BFEEBEE4971D" modified="2011-01-11" version="1">MSLIAGTYVTIMVDREVSPFGYFLTVGEQDVLLHYTELTREIEVGERLEVFIFHDTEDRLAATMKKPFLSLGEMAKLEVADVHPRLGCFLEMGLGRQLLLPIRELPENRDLHPRVGDYVYAIMEHDKQGRLRAKLAGEQELAPLCFHAPSSWLNTWVQATVYKPLQMGTFVLVDGGVLGFGAIGMIHSSERNRMLRLGEEVKVRVTLVREDGRVNLAMSPRKEVGRDEDADRLIAFLKERPGGGMPYSDATPPDIIKQRFGISKSAFKRAMGKLMKEGLVTQKENWTYLVETMPKPKDGNGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9P2</accession>
    <name>E3E9P2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372412.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3880"/>
    <dbReference type="EnsemblBacteria" id="ADO57832">
        <property type="protein sequence ID" value="ADO57832"/>
        <property type="gene ID" value="PPSC2_18135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3874"/>
    <dbReference type="eggNOG" id="ENOG5032FME">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2956340_0_0_9"/>
    <dbReference type="OMA" id="FIERWIW"/>
    <dbReference type="OrthoDB" id="2017772at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="7401" checksum="72B8C4699498A465" modified="2011-01-11" version="1">MDDKFIEELREISRNDKRRSEFLIKGMKETLQERKEKNFIERWIWGQKNKKLIARKFKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9T9</accession>
    <name>E3E9T9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05640"/>
    <dbReference type="EnsemblBacteria" id="ADO57879">
        <property type="protein sequence ID" value="ADO57879"/>
        <property type="gene ID" value="PPSC2_18340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3924"/>
    <dbReference type="eggNOG" id="COG2764">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046006_11_2_9"/>
    <dbReference type="OMA" id="YKQAFGA"/>
    <dbReference type="OrthoDB" id="1467120at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="22"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="174" mass="19293" checksum="75BDF8011EAD7CB1" modified="2011-01-11" version="1">MTESREYVGVSGKYTKKGIPNGFTSITPFITVKNPSEAIEFYKAVFNARVKDITELPDENGNKIIVHAELDFGNGFLQLGAANPTYQLVLPPDEGNACYSFGIYVMNVDQVIENAVARGAKVREPVANFVSGDRFASILDPCGVRWSIMTRIEDLSEEESSRRVAEWAKSFSEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA41</accession>
    <name>E3EA41_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytochrome P450</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372904.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4383"/>
    <dbReference type="EnsemblBacteria" id="ADO58333">
        <property type="protein sequence ID" value="ADO58333"/>
        <property type="gene ID" value="PPSC2_20465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4365"/>
    <dbReference type="eggNOG" id="COG4994">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_141608_2_0_9"/>
    <dbReference type="OMA" id="VRYTRTW"/>
    <dbReference type="OrthoDB" id="1644255at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027843">
        <property type="entry name" value="DUF4440"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14534">
        <property type="entry name" value="DUF4440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4440" evidence="1">
        <location>
            <begin position="6"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="13696" checksum="73781024A463377C" modified="2011-01-11" version="1">MQNNQIIEYEEKLRKAMLASDVQILNELIHDDLIFVNHFGQVINKEADLEAHRSGVLHFTDIQVLNQSVIPLDDTVVTVTRVSLRGTVGNDPIEDEMCYTRVWHNIDGALKIISGHCSTVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAK3</accession>
    <name>E3EAK3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycerophosphodiester phosphodiesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_22640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373300.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10115"/>
    <dbReference type="EnsemblBacteria" id="ADO58761">
        <property type="protein sequence ID" value="ADO58761"/>
        <property type="gene ID" value="PPSC2_22640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4795"/>
    <dbReference type="eggNOG" id="COG0584">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065128_0_0_9"/>
    <dbReference type="OMA" id="RHEWTES"/>
    <dbReference type="OrthoDB" id="1542724at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008081">
        <property type="term" value="F:phosphoric diester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="SSF51695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GP-PDE" evidence="1">
        <location>
            <begin position="35"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="33372" checksum="ECFE3A80008D6B59" modified="2011-01-11" version="1">MKRVIAAVILLMLIGTFLLAYKGQSTEEHTGFTTHRVISHAMGAVDGLAYTNAREAFVENYKKGSRVFEVDLMFTSDEHLVARHEWTESFTKQMQQEHAVATEQGGKPWSYHQFKNTPIHGSYTPLDWKDVLDLLEKYPDAYIVTDTKEQDSAQIKRLFAQLTLQAQEKNPELLSRIVPQIYNEEMLQTLRSIYPYTSIIYTLYATEDTDDQIIQFVQQHDITAVTLPENRVSGALVESLRQAGAVCYVNTINELKDATEYEQMGVRGFYTDVLTEKELRKRSWLYALRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAS5</accession>
    <name>E3EAS5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cobalt-precorrin-3B C(17)-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cbiH</name>
        <name evidence="7" type="ORF">PPSC2_23695</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
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            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373525.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11200"/>
    <dbReference type="EnsemblBacteria" id="ADO58989">
        <property type="protein sequence ID" value="ADO58989"/>
        <property type="gene ID" value="PPSC2_23695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5015"/>
    <dbReference type="eggNOG" id="COG0155">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1010">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024863_0_0_9"/>
    <dbReference type="OMA" id="HDIGMLT"/>
    <dbReference type="OrthoDB" id="402333at2"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11646">
        <property type="entry name" value="Precorrin_3B_C17_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006363">
        <property type="entry name" value="Cbl_synth_CobJ/CibH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006066">
        <property type="entry name" value="NO2/SO3_Rdtase_FeS/sirohaem_BS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01466">
        <property type="entry name" value="cobJ_cbiH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00365">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="5">
        <location>
            <begin position="6"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="6">
        <location>
            <begin position="482"/>
            <end position="582"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="603" mass="64011" checksum="B09C27BF4C32A3CF" modified="2011-01-11" version="1">MSPLGKLLVIGFGPGDMEHITKRALDALAESEVIIGYNTYVDLIRPLLNGQEIVRTGMTEEVSRAQEAVRQAEMGKKVAVISSGDAGVYGMAGLVYEVLMQKGWRREDGVEVEVVPGISAIQSCASLLGAPVMHDACTISLSDHLTPWETIVKRVEAAASADFVIALYNPRSGRRTRQIVETQSILLRYRDPQTPVGLVKSAYRERQQVIVTTLEDMLNHDIGMLTTVIIGNSSTTVYDGLIVTPRGYQRKYTLDATEQVLKPHQRLRTEAEPWSLGAQVDRALDAPQGGGTLTAPTEPSASGAAVATQARPQAMAAVQVTPAKQTGAAAPASLAAEALGRLAVGGKLPGEANTRWSGQAPTAQSAVGTAAGAGAGAAAGKAPGGFGKPALFEVGVSPGVGNKKFTARQMALLAEVAGDDGELEYTPDHQIVLRVPCADPEELVGQLRDERFIVMPIGDVFKVKACDFCNMEKDDAVPVAEHLQVVLGGLQAPKETSIALNGCGMACYGAVLEDIGIVYRKGGYDLFLGGKKFGRNAHAAQPVAEGIRGDQITDIVENIIAEYKEKGHPNERFHKFFKRVGIVAGFRHEDAPATVEVNAVCGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB13</accession>
    <name>E3EB13_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gluconate:proton symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373826.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12555"/>
    <dbReference type="EnsemblBacteria" id="ADO59293">
        <property type="protein sequence ID" value="ADO59293"/>
        <property type="gene ID" value="PPSC2_25060"/>
    </dbReference>
    <dbReference type="GeneID" id="66575061"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5310"/>
    <dbReference type="eggNOG" id="COG2610">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052160_0_0_9"/>
    <dbReference type="OMA" id="PPAYGML"/>
    <dbReference type="OrthoDB" id="1585405at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015128">
        <property type="term" value="F:gluconate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003474">
        <property type="entry name" value="Glcn_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30354">
        <property type="entry name" value="PTHR30354"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02447">
        <property type="entry name" value="GntP_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="228"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="261"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="293"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="330"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="408"/>
            <end position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="431" mass="43343" checksum="401A24682603B8A2" modified="2011-01-11" version="1">MEGLTISWIGALAGLAIAIILILRKLNPVYALFLGAIVGALLGGANLEQTISVLISGTQSVMGTVIRVLAAGVLAGVMMESGAAETIAQAIVKKFGGSKAILALALATMIITAVGVFIPVAVLIVAPIALSVGNKMGISKLALLLALSGGGKAGNIISPNPNTIAAARGFNLDLSHVMLAGVVPAICGLIMTVLVASMLKNKGVKVSEQDIMDSDVDTSKYPALGRAIVAPVVAVILLMINPIGSISGIEALSNFKVDAMYILPIAGIVGMLAMGQGRNILKYSASGLNKMTATVLILIGAGGIAGLISASNLSAQVVGLIEASGVSGTFLAPLAGILMAAATASTSTGVILATGSFGEAILNMGTAPLAAAVMVHTGATVIDSLPQGNYFHVTADSMKMSIKQRMGLIPYEAIVGGTMAIVATIIYGFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB15</accession>
    <name>E3EB15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gntR11</name>
        <name evidence="5" type="ORF">PPSC2_25065</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373828.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12560"/>
    <dbReference type="EnsemblBacteria" id="ADO59295">
        <property type="protein sequence ID" value="ADO59295"/>
        <property type="gene ID" value="PPSC2_25065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5312"/>
    <dbReference type="eggNOG" id="COG1802">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_5_5_9"/>
    <dbReference type="OMA" id="DNHELYI"/>
    <dbReference type="OrthoDB" id="1911275at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="17"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="28107" checksum="2AEB83FE2167991D" modified="2011-01-11" version="1">MVQSSEFLYPSKWLLKASAGDRVTSELRMRIISGAIESGTILSENKLAADFAVSRSPIREALKILASENIIRLERMGAVVMGLSEKEIEEIYDVRLLIESFVFERLIKMDTHDLAKELSKILEMMKVAVKYSDADEFSYQDVLFHETIIRAVNHSYILMIWNNLKPVMESLILLSMRMRFKEKYEDFSRIVKNHELYIEAIQAKDRDLMIKSLHVNFDDVQGKVEDLWMSQQLLSKGVVPPND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB19</accession>
    <name>E3EB19_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">betI9</name>
        <name evidence="3" type="ORF">PPSC2_25085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59299.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324912.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5362"/>
    <dbReference type="EnsemblBacteria" id="ADO59299">
        <property type="protein sequence ID" value="ADO59299"/>
        <property type="gene ID" value="PPSC2_25085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5316"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_091687_2_1_9"/>
    <dbReference type="OrthoDB" id="1745184at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041479">
        <property type="entry name" value="TetR_CgmR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17937">
        <property type="entry name" value="TetR_C_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="7"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59299.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="183" mass="20732" checksum="1504886F2FF25309" modified="2015-05-27" version="2">MNTTKKTLKRELILKAASIIVQEEGVEKLTLEAVAKKAGVSKGGLLYHFPNKDELILGMVEQLSTSFITEFNERAENDTHSQGRWTRAYMNTSFSGDQDASDLFTALSAAQFTNPQMLKLLQDEYANIQNKIENDELDPVRSTIVRLAIDGLWFAEMFGLALPNEELKQKIIEELKTYIKENE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB21</accession>
    <name>E3EB21_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Beta-xylanase</fullName>
            <ecNumber evidence="7">3.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">xynB3</name>
        <name evidence="10" type="ORF">PPSC2_25090</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-xylosidic linkages in xylans.</text>
            <dbReference type="EC" id="3.2.1.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Glycan degradation; xylan degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the glycosyl hydrolase 10 (cellulase F) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.8" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373834.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12585"/>
    <dbReference type="CAZy" id="GH10">
        <property type="family name" value="Glycoside Hydrolase Family 10"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59301">
        <property type="protein sequence ID" value="ADO59301"/>
        <property type="gene ID" value="PPSC2_25090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5318"/>
    <dbReference type="eggNOG" id="COG3693">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041139_0_0_9"/>
    <dbReference type="OMA" id="YSWRASG"/>
    <dbReference type="OrthoDB" id="654705at2"/>
    <dbReference type="UniPathway" id="UPA00114"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031176">
        <property type="term" value="F:endo-1,4-beta-xylanase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044846">
        <property type="entry name" value="GH10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031158">
        <property type="entry name" value="GH10_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001000">
        <property type="entry name" value="GH10_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31490">
        <property type="entry name" value="PTHR31490"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00331">
        <property type="entry name" value="Glyco_hydro_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00134">
        <property type="entry name" value="GLHYDRLASE10"/>
    </dbReference>
    <dbReference type="SMART" id="SM00633">
        <property type="entry name" value="Glyco_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00591">
        <property type="entry name" value="GH10_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51760">
        <property type="entry name" value="GH10_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4 7 10" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 7 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="10" id="KW-0858">Xylan degradation</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168720" description="Beta-xylanase" evidence="8">
        <location>
            <begin position="31"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="GH10" evidence="9">
        <location>
            <begin position="44"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO59301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="35289" checksum="E778BCC1DE954C3E" modified="2011-01-11" version="1">MLRTKVGKLVSSLALAGVLLSSVLVNQADAGLANGSKFLGNIIAGSVPPSYGTYWNQVTPENSTKWESVEGSRNNMNWSQADTAYNYARSNGFPFKFHTLVWGAQEPGWVKGLSAADQKAEVTQWIKAAGQRYPNAAFVDVVNEPLHQKPSYRNAIGGDGSTGWDWVIWSFQQARQAFPNAKLHINDYGIINDPSLADQYVNIINQLKSRGLIDGIGIQCHHFSMDNVSVNTMNTVLNKLSATGLPIYVSELDITGDDNTQLARYKEKFPVLWQNPSVKGVTLWGYIQGQTWKDGTHLLNSNGTERPALQWLRQYLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB44</accession>
    <name>E3EB44_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373857.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59324">
        <property type="protein sequence ID" value="ADO59324"/>
        <property type="gene ID" value="PPSC2_25200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5341"/>
    <dbReference type="eggNOG" id="ENOG5032CF6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1979357_0_0_9"/>
    <dbReference type="OMA" id="ISYLMAK"/>
    <dbReference type="OrthoDB" id="1621453at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="14758" checksum="1B90A668EA1D17B5" modified="2011-01-11" version="1">MKSQLRNITVDGYAFVYWYTGGSSFILNLSPKENKNIKITLIFQADPPEGEPHTSWSFYDISAQINGMETVIHLGKPKHIAEIISYLMAKRQELWIQGRPQVLDHAWDLLKEMGYCEFKPIWIRQW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB67</accession>
    <name>E3EB67_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE11</name>
        <name evidence="2" type="ORF">PPSC2_25300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373880.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5411"/>
    <dbReference type="EnsemblBacteria" id="ADO59347">
        <property type="protein sequence ID" value="ADO59347"/>
        <property type="gene ID" value="PPSC2_25300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5364"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049749_5_1_9"/>
    <dbReference type="OMA" id="CFRIPRQ"/>
    <dbReference type="OrthoDB" id="1515497at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="53"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="29223" checksum="CB17011AA06945E1" modified="2011-01-11" version="1">MNKWNTEEAIRRWNMHAENFTAKYTEEGDRSREVLLNPALQECMGLIAGKKVLDAGCGEGYLSRKMVQEGALVEAVDYSTEMLKLARERTPSAMGITYHHGNLERLEMFEDQSFDLIVSNMVIQDLAHYELAIAEMRRLLVPGGSFIFSILHPCFLTPQSGWVKDETGKKLYWKVDQYFNEGPLEQAIPYDQEEKLLYFHRTLGSYVQTIVEAGLLLDGMIEPKPSADMLEKYPHFREDLNVSNFLIFKTQRQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB82</accession>
    <name>E3EB82_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yxdJ</name>
        <name evidence="8" type="ORF">PPSC2_20850</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372983.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08095"/>
    <dbReference type="EnsemblBacteria" id="ADO58414">
        <property type="protein sequence ID" value="ADO58414"/>
        <property type="gene ID" value="PPSC2_20850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4446"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_3_9"/>
    <dbReference type="OMA" id="VWEYGFG"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="3"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="129"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="129"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26815" checksum="BE971058BD2AD0BE" modified="2011-01-11" version="1">MHKILIVEDDPQISSLLQSYLEKYGYQGVVVSNFDQVLGVFQKVKPDLVILDVNLPRFDGFYWCRQIRTQSTCPILFVSARDDKMDQVIALQNGADDYITKPFHPEVLLAKVESNLRRAYGLYAVAQKSRTITVSGLTLYPDTMELVFHDKQVEMSHKEAALLELLMTYPKQVVGRVHLLEALWDDYQYVGENTLNVYVTRVRKKLSELGLEDIIETVRGAGYRLHLTEEEEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBC6</accession>
    <name>E3EBC6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yngC</name>
        <name evidence="2" type="ORF">PPSC2_21145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373027.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08375"/>
    <dbReference type="EnsemblBacteria" id="ADO58458">
        <property type="protein sequence ID" value="ADO58458"/>
        <property type="gene ID" value="PPSC2_21145"/>
    </dbReference>
    <dbReference type="GeneID" id="66575834"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4495"/>
    <dbReference type="eggNOG" id="COG0586">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044208_1_2_9"/>
    <dbReference type="OMA" id="LFIYWIG"/>
    <dbReference type="OrthoDB" id="1928533at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="22896" checksum="D5065E61115F9EDD" modified="2011-01-11" version="1">MDHISSIINYLFEIIRSLGYFGIMLGLMVEVIPSEIVLAYGGFLVSSGHINFFGAVVFGTIGGVLAQLFIYWIGRYGGRPVLDKYGKYILIKKSHVDHAEAWFNKYGTGVIFTARFIPVVRHAISIPAGLARMNVWRFIILTTLAIIPWSVLFIYLGMLLGDKWEQIDEVAAPYIKPILLVALALLIIYFVIKWIVAKNKKGSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBH5</accession>
    <name>E3EBH5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">amyC5</name>
        <name evidence="7" type="ORF">PPSC2_22035</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373215.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09185"/>
    <dbReference type="EnsemblBacteria" id="ADO58649">
        <property type="protein sequence ID" value="ADO58649"/>
        <property type="gene ID" value="PPSC2_22035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4689"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_2_9"/>
    <dbReference type="OMA" id="FQRNIMS"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="66"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="107"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="240"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="70"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31243" checksum="D496A5EA5688496A" modified="2011-01-11" version="1">MASKKIASSMIKFIVLTVILILFIVPFVFLLINSFKENMAITSNPLSLPESFNMANYMNAFDKMNYIAAFTNSLVITVLSVLFISLFAAMTAHYFVRNNTKFNQYTFMLMVASMIIPFQAIMIPLVKIYGSLDLLNSKWSLIYMYIGFGSSLAVFIYHGFVKSIPKELEEAALIDGCTRIQTFFRIVFPVLMPTTATISILNVLWIWNDFLLPSLILVDPEQRTLPLSTYNFYGTYTVDYGPLMASLVLTIFPIIIIYLFAQKYIIQGVMQGSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBR3</accession>
    <name>E3EBR3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Phosphoglucomutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">manB1</name>
        <name evidence="11" type="ORF">PPSC2_23185</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373419.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10670"/>
    <dbReference type="EnsemblBacteria" id="ADO58881">
        <property type="protein sequence ID" value="ADO58881"/>
        <property type="gene ID" value="PPSC2_23185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4910"/>
    <dbReference type="eggNOG" id="COG1109">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016950_0_0_9"/>
    <dbReference type="OMA" id="PQDNGYK"/>
    <dbReference type="OrthoDB" id="637615at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016868">
        <property type="term" value="F:intramolecular transferase activity, phosphotransferases"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005844">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005845">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005846">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005843">
        <property type="entry name" value="A-D-PHexomutase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036900">
        <property type="entry name" value="A-D-PHexomutase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016066">
        <property type="entry name" value="A-D-PHexomutase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005841">
        <property type="entry name" value="Alpha-D-phosphohexomutase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02878">
        <property type="entry name" value="PGM_PMM_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02879">
        <property type="entry name" value="PGM_PMM_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02880">
        <property type="entry name" value="PGM_PMM_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00408">
        <property type="entry name" value="PGM_PMM_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00509">
        <property type="entry name" value="PGMPMM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55957">
        <property type="entry name" value="SSF55957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00710">
        <property type="entry name" value="PGM_PMM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_I" evidence="8">
        <location>
            <begin position="48"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_II" evidence="9">
        <location>
            <begin position="231"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_III" evidence="10">
        <location>
            <begin position="334"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_IV" evidence="7">
        <location>
            <begin position="482"/>
            <end position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="572" mass="62911" checksum="36811A87ADD39AED" modified="2011-01-11" version="1">MTQLSKKALEGIESWLQDPYIDEETKQELRALQGNDQELEDRFYKELEFGTGGLRGVIGAGSNRMNRYVIGRATQGLARYILEQHAGKEGKPSVVIAHDSRHFSPEFALDAALVLAGNGIVAKLFPSLRPTPQLSFSVRHLGASGGIVVTASHNPPEYNGYKVYNNEGGQLVPDQAEKVIGYIREVPSFADIKSLTREEAEAQGLLIWLGEEEDEAFVDTVAGVSVNRELIAAGPGKNFKVVFTPLHGTGNIPVRRVLEKIGFEQVHIVPEQEQPDAEFSTVKSPNPEERDAFKLAIALGEKIGADLLIGTDPDADRMGAVVKNRDGEYVVLSGNQSGAIMVYYLLNQLKETGKLPNNGAVIKTIVTSEMGAVIAEHFGATVFNTLTGFKYIGEKMNQFDQTGEYTYLFGYEESYGYLAGNYARDKDAVLAAMLIAEAAAYYSTQGKTLYDVLQELYEQFGYFLEKLESRTLKGKDGVEQIQSKMTDWRSNAPQEIAGVKVDKVLDYSQGLDGLPQENVLKFLLEDGSWFCLRPSGTEPKIKVYFAVRGSSLSDAEQRIGQLVDAVMARVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC40</accession>
    <name>E3EC40_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Mechanosensitive ion channel protein MscS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mcsBUsg</name>
        <name evidence="9" type="ORF">PPSC2_25460</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373910.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12955"/>
    <dbReference type="EnsemblBacteria" id="ADO59380">
        <property type="protein sequence ID" value="ADO59380"/>
        <property type="gene ID" value="PPSC2_25460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5395"/>
    <dbReference type="eggNOG" id="COG0668">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037945_8_2_9"/>
    <dbReference type="OMA" id="GMQDTLT"/>
    <dbReference type="OrthoDB" id="1903165at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045276">
        <property type="entry name" value="YbiO_bact"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30460">
        <property type="entry name" value="PTHR30460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="35"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="116"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="297"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="316" mass="34873" checksum="3422E93CD3689563" modified="2011-01-11" version="1">MTFIHWLAGNLDTDDVVQGAIHWKDAVWKWLTDSAMWSTFLFVILKIVIIFIITRIFIRVINKIIDKSMEQKGDNGRFRLNTRRLTTVGELLKNVTNIVFNFILIMLVLSQMGINLGPLIAGAGVLGLAVGFGAQSLVKDVITGFFIIFEDQFAVGDVIQTGTFKGTVEMIGLRTTRLVSWKGEVYILPNGSITTVTNFSMSNALAVVDVPMKAERSLEEAVSLVKQAIQGIEESNAQILNMPDVLGVQSMTTSEYIVRVVAECMPNTGALVERDIQNNIKRALEDEEHRQAALETAITLEKEDEPGRKGGEKGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC46</accession>
    <name>E3EC46_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chromosome partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">noc</name>
        <name evidence="8" type="ORF">PPSC2_25485</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373916.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12980"/>
    <dbReference type="EnsemblBacteria" id="ADO59386">
        <property type="protein sequence ID" value="ADO59386"/>
        <property type="gene ID" value="PPSC2_25485"/>
    </dbReference>
    <dbReference type="GeneID" id="66574971"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5401"/>
    <dbReference type="eggNOG" id="COG1475">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023853_0_1_9"/>
    <dbReference type="OMA" id="SQSYVAN"/>
    <dbReference type="OrthoDB" id="653368at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041468">
        <property type="entry name" value="HTH_ParB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023705">
        <property type="entry name" value="Nucleoid_occlusion_protein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004437">
        <property type="entry name" value="ParB/RepB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17762">
        <property type="entry name" value="HTH_ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04285">
        <property type="entry name" value="nucleoid_noc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00180">
        <property type="entry name" value="parB_part"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0717">Septation</keyword>
    <feature type="domain" description="ParB" evidence="7">
        <location>
            <begin position="21"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="272" mass="31262" checksum="CC018FFB58AEDB8E" modified="2011-01-11" version="1">MKEQFSKLFGLTERSNGDEIKQIPVRDIVSSPYQPRTIFDDEKIDELCQTIKTHGVIQPIVVRFRNGQYEIIAGERRWRAVTKLGMETIPAIVREFNDSQAASIALIENLQREGLTAIEEAVAYQKLIDLHQLTQESLAQRLGKSQSTIANKIRLLHLPERVKEALMERKVSERHARALLSLETEELQYKVLDEVIAKELNVKQTEARVAFYKQVSTIKKSKRISFTKDVRLALNTIRQSIDMVSGSGLDIKTKESDHEDHYEIVIQIPKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC51</accession>
    <name>E3EC51_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Membrane protein insertase YidC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Foldase YidC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Membrane integrase YidC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Membrane protein YidC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yidC</name>
        <name evidence="12" type="synonym">oxaA</name>
        <name evidence="12" type="ORF">PPSC2_25510</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373921.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13005"/>
    <dbReference type="EnsemblBacteria" id="ADO59391">
        <property type="protein sequence ID" value="ADO59391"/>
        <property type="gene ID" value="PPSC2_25510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5406"/>
    <dbReference type="eggNOG" id="COG0706">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036138_5_0_9"/>
    <dbReference type="OMA" id="WIMPIMI"/>
    <dbReference type="OrthoDB" id="524437at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032977">
        <property type="term" value="F:membrane insertase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01811">
        <property type="entry name" value="YidC_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028055">
        <property type="entry name" value="Membr_insert_YidC/Oxa1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001708">
        <property type="entry name" value="YidC/ALB3/OXA1/COX18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023060">
        <property type="entry name" value="YidC/YidC1/YidC2_Firmicutes"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12428">
        <property type="entry name" value="PTHR12428"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02096">
        <property type="entry name" value="60KD_IMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00701">
        <property type="entry name" value="60KDINNERMP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03592">
        <property type="entry name" value="yidC_oxa1_cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0143">Chaperone</keyword>
    <keyword evidence="8" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0564">Palmitate</keyword>
    <keyword evidence="4 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9 11" id="KW-0732">Signal</keyword>
    <keyword evidence="2 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008953356" description="Membrane protein insertase YidC" evidence="11">
        <location>
            <begin position="31"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="134"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="208"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="231"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="265"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO59391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="33121" checksum="B819F45853144D49" modified="2011-01-11" version="1">MSRLKTQRGKWFLLIALLALVAVLSGCTQAAHNSYTTADLANGSWWQRYVVYWFSYALDTFAQWFSGEYGLAVLILVIIVRTIILPLTLKQVRSSRAMQAIQPQLKEIQAKYKDTPERVQQETMKLFQENKVNPMAGCLPLLVQMPIFIALYNAIYYNSALRDHDFLWLQLGKPDHFFILPILAAITTFIQTWMMMKMNPTPQQGPMQFLLYVYPVLILFMSYNFPSALPLYWFFSNIYTIVQNYFLYRNNDKDAALANVKTASLTKTGSSNSKKKSGKNTKGAKKSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC79</accession>
    <name>E3EC79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YxnB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yxnB</name>
        <name evidence="1" type="ORF">PPSC2_01190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368865.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0235"/>
    <dbReference type="EnsemblBacteria" id="ADO54222">
        <property type="protein sequence ID" value="ADO54222"/>
        <property type="gene ID" value="PPSC2_01190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.227"/>
    <dbReference type="eggNOG" id="ENOG50343YD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1648761_0_0_9"/>
    <dbReference type="OMA" id="DEWRHIN"/>
    <dbReference type="OrthoDB" id="2055010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="19746" checksum="28BDDE27DEE0478F" modified="2011-01-11" version="1">MRKLTIDELRQLVPEYNNDLAKERASGIFNYIIMMVALARDHHMQHQDLVNWIHRHFEERGYYEETLLKFGSGNTKLFLQDFVIGRSLLYENIEVFIHENGNYEVQSTSWWLNQPTEACFYFDMEPEEIVKYVQSLACSKADRLGITLKISHKNGIEQALICKKGTII</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC94</accession>
    <accession>E3E4W9</accession>
    <name>E3EC94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">insK12</name>
        <name evidence="2" type="ORF">PPSC2_00490</name>
        <name evidence="3" type="ORF">PPSC2_01255</name>
        <name evidence="4" type="ORF">PPSC2_07960</name>
        <name evidence="5" type="ORF">PPSC2_08010</name>
        <name evidence="6" type="ORF">PPSC2_14685</name>
    </gene>
    <organism evidence="3 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57097.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0097"/>
    <dbReference type="EnsemblBacteria" id="ADO54084">
        <property type="protein sequence ID" value="ADO54084"/>
        <property type="gene ID" value="PPSC2_00490"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54237">
        <property type="protein sequence ID" value="ADO54237"/>
        <property type="gene ID" value="PPSC2_01255"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55661">
        <property type="protein sequence ID" value="ADO55661"/>
        <property type="gene ID" value="PPSC2_07960"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55671">
        <property type="protein sequence ID" value="ADO55671"/>
        <property type="gene ID" value="PPSC2_08010"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57097">
        <property type="protein sequence ID" value="ADO57097"/>
        <property type="gene ID" value="PPSC2_14685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00490"/>
    <dbReference type="KEGG" id="ppm:PPSC2_01255"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07960"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08010"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1674"/>
    <dbReference type="eggNOG" id="COG2801">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027402_4_3_9"/>
    <dbReference type="OMA" id="VQISMTE"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
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        <property type="project" value="InterPro"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00665">
        <property type="entry name" value="rve"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13333">
        <property type="entry name" value="rve_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="126"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57097.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="34096" checksum="80F8FCA8E10E4447" modified="2011-01-11" version="1">MTRKEARFEIIEGMRTRYSLKWLLELAHVSRAGYYKWRKTQQTTQQRKQEEELLESHMLSIHRIHPYFGYLRMTVALRREGILVNHKKVYRLMKKLGIRSVIRKKRRFFGKQASVVNANRLDRQFQADSPLSKLVTDITYIRAGERFVYLSVIQDLFNNEIVAWRLSERNDLALVSETLDVLSKNVNMEGVILHSDQGFQYTSKPFNRKLKRLGMLGSHSRRGNCLDNACIESFFSHLKTEKIYLTKPGTLAEVEQHVREYISFYNENRFQKKLNNRSPIEYRETVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECE6</accession>
    <name>E3ECE6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore gernimation protein GerA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gerA</name>
        <name evidence="3" type="ORF">PPSC2_01510</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368931.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14205"/>
    <dbReference type="EnsemblBacteria" id="ADO54289">
        <property type="protein sequence ID" value="ADO54289"/>
        <property type="gene ID" value="PPSC2_01510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.299"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021639_4_1_9"/>
    <dbReference type="OMA" id="FPAYIET"/>
    <dbReference type="OrthoDB" id="576172at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004995">
        <property type="entry name" value="Spore_Ger"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03323">
        <property type="entry name" value="GerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005690">
        <property type="entry name" value="GerBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="249"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="291"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="378"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="410"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="492" mass="54865" checksum="4E8923366DBE7BC1" modified="2011-01-11" version="1">MARPLEAKLDYLEKTLGHLPDVVFKKMNVGQTGIHVIMIYLSGIADTSMINEQIVKPLILTGIRENHSPVNPDKIKEELIQQTAFTIDMTEGTDLETCVSKVLSGYTCLLIEGTDDVFFASTGKFPSRSVEEPSTETLVRGPREGFIEDLESNLAMVRRHIKDISFRIDKITIGRRSSRKLAILYISDIANPELVQEVKRRVETIDVDDASDTGVIEQWIEEHPWSPFPQIQASERSDKAITALMSGRVVIMLDGTPFVLIAPMTFWMLAQSPEDYYERFPLGTFFRMLRLMALFIATFLPSLYVALISFHPGLIPPELVISIVASREGIPFPVFVEALIMELALEILREASLRLPKGIGQVIGIVGGLVIGQAAVEAAVVSAFLIIVVGLTAIASFASPQYSGSIGIRLLRFPIMMIAGVFGLYGVILAFICLGVHMVQIKSFGVPYMSPLAPVRLRDQQDTLVRVPYKYLRKRPMMLKTQDETHSNRKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECF3</accession>
    <name>E3ECF3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">norA1</name>
        <name evidence="9" type="ORF">PPSC2_01540</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368938.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14235"/>
    <dbReference type="EnsemblBacteria" id="ADO54296">
        <property type="protein sequence ID" value="ADO54296"/>
        <property type="gene ID" value="PPSC2_01540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.306"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_10_14_9"/>
    <dbReference type="OMA" id="LSMETIG"/>
    <dbReference type="OrthoDB" id="626204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="76"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="105"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="166"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="212"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="248"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="278"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="303"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="337"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="369"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="10"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="399" mass="44058" checksum="EE764C446CA8FA82" modified="2011-01-11" version="1">MVRNLYLNRNIACMIVISLIANMSGSMILPLFAIYVEQFGISTLGMSILFSLFYVGRFLGGGMAGRIYEKIGAKRLGLGLLIAEIACMLLFPIATSFIILSILRLLQGLVAIGLTVFVRVTVNHMSTAENRGTLNGYISSSEGAGMILGPLISGVIVSYFSLSVPFYFVAIFACISFIAVSRMTFANSPLKPQQQHPPLQKPQRRIILTKQLLLYSTVHLLEMSAFAIFLTYFSVYATYKLHWSPAEISLAFTIIGISTFVSAPFIGKISDMLKDRLLLCIIGLLLIMMEIILFLWFTEPWIVYLGMFIGGIGGASYLDSFYSQLGDVIPEENRSSFIGNVVSLSELGAIVSPIIAGALMDCFSINTPFYYNMILVLIAIVIQYTIRLKSKSVRKRPIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECK4</accession>
    <name>E3ECK4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Ribonuclease H</fullName>
            <shortName evidence="5">RNase H</shortName>
            <ecNumber evidence="4 5">3.1.26.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rnhA</name>
        <name evidence="7" type="ORF">PPSC2_03940</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>Endonucleolytic cleavage to 5'-phosphomonoester.</text>
            <dbReference type="EC" id="3.1.26.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5">Binds 1 Mg(2+) ion per subunit. May bind a second metal ion at a regulatory site, or after substrate binding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 5">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the RNase H family.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.4" evidence="4 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369412.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16745"/>
    <dbReference type="EnsemblBacteria" id="ADO54776">
        <property type="protein sequence ID" value="ADO54776"/>
        <property type="gene ID" value="PPSC2_03940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.783"/>
    <dbReference type="eggNOG" id="COG0328">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030894_6_2_9"/>
    <dbReference type="OMA" id="MQEIEIF"/>
    <dbReference type="OrthoDB" id="1953872at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006401">
        <property type="term" value="P:RNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd09278">
        <property type="entry name" value="RNase_HI_prokaryote_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00042">
        <property type="entry name" value="RNase_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002156">
        <property type="entry name" value="RNaseH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022892">
        <property type="entry name" value="RNaseHI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00075">
        <property type="entry name" value="RNase_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50879">
        <property type="entry name" value="RNASE_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase H type-1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="9"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16651" checksum="CBDCC37166F94C03" modified="2011-01-11" version="1">MKEVMVYTDGACSGNPGPGGWGIVLLYGEHRKELSGAEKMTTNNRMEIKSVIEALKLLKEPCRVKVHSDSAYVVNCFKQGWIKNWLRNGWRNSKNQPVENKELWEELWELMGNHEVEYVKVKGHSDNELNNRCDFLATSAVKNLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="80" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECL9</accession>
    <name>E3ECL9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">D-alanine--D-alanine ligase</fullName>
            <ecNumber evidence="7">6.3.2.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">D-Ala-D-Ala ligase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">D-alanylalanine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">ddl</name>
        <name evidence="11" type="ORF">PPSC2_04005</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Cell wall formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + 2 D-alanine = ADP + D-alanyl-D-alanine + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11224"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57416"/>
            <dbReference type="ChEBI" id="CHEBI:57822"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="8">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="8">Binds 2 magnesium or manganese ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the D-alanine--D-alanine ligase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.4" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369426.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16805"/>
    <dbReference type="EnsemblBacteria" id="ADO54791">
        <property type="protein sequence ID" value="ADO54791"/>
        <property type="gene ID" value="PPSC2_04005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.798"/>
    <dbReference type="eggNOG" id="COG1181">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039268_0_0_9"/>
    <dbReference type="OMA" id="NTTPGMT"/>
    <dbReference type="OrthoDB" id="764798at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008716">
        <property type="term" value="F:D-alanine-D-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00047">
        <property type="entry name" value="Dala_Dala_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000291">
        <property type="entry name" value="D-Ala_lig_Van_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005905">
        <property type="entry name" value="D_ala_D_ala"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011095">
        <property type="entry name" value="Dala_Dala_lig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011127">
        <property type="entry name" value="Dala_Dala_lig_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07478">
        <property type="entry name" value="Dala_Dala_lig_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01820">
        <property type="entry name" value="Dala_Dala_lig_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039102">
        <property type="entry name" value="Ddl/VanB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01205">
        <property type="entry name" value="D_ala_D_alaTIGR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00843">
        <property type="entry name" value="DALA_DALA_LIGASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00844">
        <property type="entry name" value="DALA_DALA_LIGASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 7 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0464">Manganese</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="10">
        <location>
            <begin position="139"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR039102-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="362" mass="40151" checksum="C5C73C82A193B7C3" modified="2011-01-11" version="1">MANQKLTVGLVYGGKSGEHEVSLQTAYAVMNAFNYEKYEIIPFYITKAGDWRRGTLLNAPLTTVEQLKLEHAEGGTKAALDTLFGKLYGEQTLDVLFPLLHGTFGEDGTIQGLFEMADMPYVGAGVLASAAGMDKGVMKKLFEHAGLPQVKYCYFNSTQWAQTGHDLVRNIETELGYPCFVKPANLGSSVGISKASNREELEKAVDLALQFDLKVIVEEYVDAREIEVSVLGNDEPIASVPGEIVSSSDYYDYAAKYTDGQSEMLIPAPLDEEVADRIRESALQAFRALEGCGISRADFFVRRSDGHILINEVNTMPGFTPFSMYPLLWRETGVSYVNLLDRMIALALERYERRSALHYENS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECR1</accession>
    <name>E3ECR1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Alpha-N-arabinofuranosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">abfA</name>
        <name evidence="5" type="ORF">PPSC2_01810</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homohexamer; trimer of dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 51 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368995.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3ECR1"/>
    <dbReference type="STRING" id="1406.LK13_14575"/>
    <dbReference type="CAZy" id="GH51">
        <property type="family name" value="Glycoside Hydrolase Family 51"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54355">
        <property type="protein sequence ID" value="ADO54355"/>
        <property type="gene ID" value="PPSC2_01810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.364"/>
    <dbReference type="eggNOG" id="COG3534">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017810_1_1_9"/>
    <dbReference type="OMA" id="SKYMRGW"/>
    <dbReference type="OrthoDB" id="620389at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046556">
        <property type="term" value="F:alpha-L-arabinofuranosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046373">
        <property type="term" value="P:L-arabinose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010720">
        <property type="entry name" value="Alpha-L-AF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06964">
        <property type="entry name" value="Alpha-L-AF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00813">
        <property type="entry name" value="Alpha-L-AF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha-L-AF_C" evidence="4">
        <location>
            <begin position="294"/>
            <end position="494"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="504" mass="56869" checksum="51D791F3BFCA6118" modified="2011-01-11" version="1">MAAAVKAKMIVDKSFRIAEVDKRIYGSFVEHLGRAVYGGIYEPTHSTSDESGFRNDVKELVKELDVPIIRYPGGNFVSGYNWEDGVGPVASRPRQLELAWRTVEPNEVGTNEFFKWAKDVGSEVMMAVNLGTRGIDAARNLVEYCNHPGGSYWSDLRRSHGIEQPHKIKTWCLGNEMDGPWQIGHKTAEEYGRLAVESAKAMRLIDPDIELVSCGSSSSTMPTFPEWEATTLDHTYEVADYISLHQYYGNHDNDTANYLARSMDMDHFIHTVISTCDYIKAKKRSKKKMMLSFDEWNVWYHSNDADKKIDPWSVAPPQLEDIYNFEDALLVGSMLITFLRHADRVKMACLAQLVNVIAPIMTENNGKAWKQTIFYPYLHASRYGRGVSLMPVVDSEKYDSKDFTDIPYLDSAVVYDEEGDALTVFAVNRHLSESLELTVDVRSFEGYRIVEHTVLEHDDLKATNSPAGEKVTPHNGGNAKLEDGIVKAHLGKASWNVIRLAKSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS1</accession>
    <name>E3ECS1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">phoR3</name>
        <name evidence="12" type="ORF">PPSC2_01860</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369005.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14625"/>
    <dbReference type="EnsemblBacteria" id="ADO54365">
        <property type="protein sequence ID" value="ADO54365"/>
        <property type="gene ID" value="PPSC2_01860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.374"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_6_9"/>
    <dbReference type="OMA" id="AMNRVES"/>
    <dbReference type="OrthoDB" id="692375at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="193"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="213"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="281"/>
            <end position="496"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="498" mass="55453" checksum="C20B3BD62FA136A2" modified="2011-01-11" version="1">MKAGRKKRRKYVLRSLRSQLLARTLLILALLLVLIGFLQYFLMKDFLYRSRADAMNTQLNSIPVDLLIKDSQENSGDGIAAPQDDTNRRGNRPGPFLFWPDMSLASIGIDGTFQSLSNENGLKPPRLTTQQYQAMQQSKRMRHGYQLITDAQGKEQLVVFRPLGPPDRSSGLLQMGVSTNSMQEQLINQLRTFILLSLIALAIGLALMLPVLRRTLVPLSRMVEAVKRIDAGNLDERFDAEQGQYEVDRLAVSFNGMLERLEHSFAAERELQMQMRRFIADASHELRTPLTSIHGFLEVLLRGAASNPKQLQSALESMYGESKRMNKLVSDLLLLAKLDRTPELKLEDISLDALLLEMKPQLLMLAGTRKVFFDMTAGVRVLAEGDKIKQVVLNLFHNAVQHTDMEQGVIHVNLSAGKKLADIQIRDNGPGMGKEQLERIFERFYRGDESRTRSSGGAGLGLAITKSIVEAHGGSITAESTLGTGSIFKVTLPLAGTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED66</accession>
    <name>E3ED66_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">NAD(P)H nitroreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">frp</name>
        <name evidence="4" type="ORF">PPSC2_02270</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nitroreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369063.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15020"/>
    <dbReference type="EnsemblBacteria" id="ADO54423">
        <property type="protein sequence ID" value="ADO54423"/>
        <property type="gene ID" value="PPSC2_02270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.431"/>
    <dbReference type="eggNOG" id="COG0778">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070764_4_1_9"/>
    <dbReference type="OMA" id="PWHFVVA"/>
    <dbReference type="OrthoDB" id="1847197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02149">
        <property type="entry name" value="NfsB-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033878">
        <property type="entry name" value="NfsB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="3">
        <location>
            <begin position="17"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="25452" checksum="BBF7C90287CE1D1A" modified="2011-01-11" version="1">MSNTSAKKQEILDAFLFRHATKEFAPDRIIPEEDFQFILETGRLSPSSVGFEPWQFVVVQNQALREKLAAVSSGGQKQLPAASHVVLILARKDVRYDSPYVEHMYKEVKGMSDEDFASLPGRYKIFQGENQRLLENERTLFDWASKQTYIALGNMMTAAAQIGIDSCPIEGFNYDQVHAILEEEGLLENGLLDISVIAAFGYRAHEPKREKSRQPLEKVTRWVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDK6</accession>
    <name>E3EDK6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Divalent metal cation transporter MntH</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">mntH</name>
        <name evidence="5" type="ORF">PPSC2_06435</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">H(+)-stimulated, divalent metal cation uptake system.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the NRAMP family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369945.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19400"/>
    <dbReference type="EnsemblBacteria" id="ADO55314">
        <property type="protein sequence ID" value="ADO55314"/>
        <property type="gene ID" value="PPSC2_06435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1325"/>
    <dbReference type="eggNOG" id="COG1914">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020088_2_0_9"/>
    <dbReference type="OMA" id="SPKWLRY"/>
    <dbReference type="OrthoDB" id="416257at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046873">
        <property type="term" value="F:metal ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00221">
        <property type="entry name" value="NRAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001046">
        <property type="entry name" value="NRAMP_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11706">
        <property type="entry name" value="PTHR11706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01566">
        <property type="entry name" value="Nramp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00447">
        <property type="entry name" value="NATRESASSCMP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01197">
        <property type="entry name" value="nramp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0406">Ion transport</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0769">Symport</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="212"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="262"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="297"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="351"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="376"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="417"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="439" mass="47066" checksum="94173AFA8A494140" modified="2011-01-11" version="1">MKNSKGNFAEIASLSEVNRSLSIPKDGTWFRKFLAFAGPGYMVAVGYMDPGNWATDIAGGSKFGYTLLSVILISNLMAILLQALSGKLGIATGKDLAQMCRDAYSRPVAIGLWLLCEIAIAAMDLAEVIGSAIALKLLFGLPLLYGVIITAFDVMLILLLQNKGFRALETLVIVLMATIAGCFGINLILAQPEWGGVLGGFVPDSQILTNPSMLYIAIGIMGATVMPHNLYLHSSIVQTRKYEQTSAGKREAITFATWDSSIALMFALFINAAILIVAAAVFHTAGRTDVAEISDAYYLLSPLLGTTLASILFGVALLASGQNSTVTGTLAGQIVMEGFLNLRLSPWLRRLVTRLIAIIPAVIVTAIAGEKGAEELLVLSQVILSIQLPFAIIPLLLFTSDKKIMGEFANKMWQKVLTWIVTAIIIILNVVLIIQTITG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDL0</accession>
    <name>E3EDL0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369949.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19410"/>
    <dbReference type="EnsemblBacteria" id="ADO55318">
        <property type="protein sequence ID" value="ADO55318"/>
        <property type="gene ID" value="PPSC2_06445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1328"/>
    <dbReference type="eggNOG" id="ENOG50343BP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2410443_0_0_9"/>
    <dbReference type="OMA" id="FICKCMD"/>
    <dbReference type="OrthoDB" id="1955953at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="12563" checksum="A73E013F7AF2D415" modified="2011-01-11" version="1">MILVIRYETNLKNTGDMMSYRPNIVNFTLAGSNEKEGLYEFKMSLADGTECRVFSQRNPEWTLTNISRLLTTPCPVCHKDFICKCMDQFHDEFLEQINAKQLFEKALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDW6</accession>
    <name>E3EDW6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidylprolyl isomerase</fullName>
            <ecNumber evidence="2">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">prsA1</name>
        <name evidence="8" type="ORF">PPSC2_00215</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368680.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13230"/>
    <dbReference type="EnsemblBacteria" id="ADO54032">
        <property type="protein sequence ID" value="ADO54032"/>
        <property type="gene ID" value="PPSC2_00215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.42"/>
    <dbReference type="eggNOG" id="COG0760">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034646_5_1_9"/>
    <dbReference type="OMA" id="VESRNEP"/>
    <dbReference type="OrthoDB" id="1838755at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000297">
        <property type="entry name" value="PPIase_PpiC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027304">
        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109998">
        <property type="entry name" value="SSF109998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50198">
        <property type="entry name" value="PPIC_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0697">Rotamase</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168160" description="Peptidylprolyl isomerase" evidence="6">
        <location>
            <begin position="34"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="PpiC" evidence="7">
        <location>
            <begin position="179"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="328"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="332"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="372" mass="40932" checksum="1F69A54B61473859" modified="2011-01-11" version="1">MSQLNKRKPWRMLSLGMAALLAISVLAACTKQADENKVKDEPKDNSKVVVTYKGGTITENEFNQEISMMKFLYPEYEAALASDQVREQIVKQEVVYKLLAAKADDKAKEEGAKQGNEQLEQYKKSVGEDKFKTFLSDQKLTEQGVKDYFTRVMTVINSETNKVTDDQLKQEFEKNKDQFTTATVRHVLINFEDPKTKKQRTKEATLKLAKEVKAKLDGGADFATIAKKYSEDPGSASNGGLYENASVAQWVPAFKEAAETQPINKIGEPVETEYGYHVIKVESRNEPTFDKLKDNEKAALKNKLAGESIQNFTENDLTKLDLKINLPKAPATQEKSGATSGAGSTTTPSGTTSGTGDSKAGTTKDGAANEGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE42</accession>
    <name>E3EE42_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YdfE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydfE</name>
        <name evidence="2" type="ORF">PPSC2_02815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369162.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15630"/>
    <dbReference type="EnsemblBacteria" id="ADO54522">
        <property type="protein sequence ID" value="ADO54522"/>
        <property type="gene ID" value="PPSC2_02815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.533"/>
    <dbReference type="eggNOG" id="COG1853">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075333_1_0_9"/>
    <dbReference type="OMA" id="LIMSFQE"/>
    <dbReference type="OrthoDB" id="1681849at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016646">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002563">
        <property type="entry name" value="Flavin_Rdtase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01613">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavin_Reduct" evidence="1">
        <location>
            <begin position="26"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="23772" checksum="ACCD309DD7F8D0A2" modified="2011-01-11" version="1">MDPMNQINQMNYSPSIKTITPSILYYGTPVILLNTLNEDGTTNISPISSSWALGDCVVLGIGTGGKALENMERHSECVINVPGPSMWENVERLAPFTGKNPVPVEKEKHGFTYQKDKYEISGLTAIDSNRVKPARIRECPIQIEAKVKEARIPDHSPYFAIVETQAIQVHVHQDIILGENHIDPAKWSPLIYNFRHYFGLGEHLGKTFRSET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEL9</accession>
    <name>E3EEL9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Endospore coat-associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yheC1</name>
        <name evidence="3" type="ORF">PPSC2_08190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370329.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20795"/>
    <dbReference type="EnsemblBacteria" id="ADO55706">
        <property type="protein sequence ID" value="ADO55706"/>
        <property type="gene ID" value="PPSC2_08190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1722"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_0_0_9"/>
    <dbReference type="OMA" id="EDHSIRG"/>
    <dbReference type="OrthoDB" id="1675180at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="293"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="384" mass="43218" checksum="4F5A628BF0C377A0" modified="2011-01-11" version="1">MSLVMPGMLGVLVSRKQDATPPITEADFCRRLSLLGRRSGISVMAFTAEGVSPEDHSIRGYVYRAGVWTFGRFPLPDIVYNRCLHVHESQNVKRTLGDIAEQKSCKLIYWSRNLPGKWQVYRALHTVDKVRPFVPPTAPYRDTLQLVEWLQRHSELFMKPQSGTHGKGTLYLRLAEGGQGLYVQGRNSQNRPFRRLFSELDAGLSWIDGIAHKRAYIVQPYLKLTSQSNHPFDVRALMQKDGNGCWRLTGFAVREGRKGTLTSNLHGGGEAHPAEPYLREQFGVDSTRLIIGQMMELSLTIAGALEERYGRLGELGIDYGIDRSGNIWLLEVNSRPGRASFFQTRQPECAFRSVNRPLEYARYLMTHSKATGPKGAGASLEHTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEW8</accession>
    <name>E3EEW8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-250</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-250</name>
        <name evidence="1" type="ORF">PPSC2_00525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368737.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13530"/>
    <dbReference type="EnsemblBacteria" id="ADO54091">
        <property type="protein sequence ID" value="ADO54091"/>
        <property type="gene ID" value="PPSC2_00525"/>
    </dbReference>
    <dbReference type="GeneID" id="66574862"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.102"/>
    <dbReference type="eggNOG" id="ENOG5033DM7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_182779_0_0_9"/>
    <dbReference type="OMA" id="FYALGTE"/>
    <dbReference type="OrthoDB" id="2024468at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="97" mass="11072" checksum="854D958600CE71D5" modified="2011-01-11" version="1">MGVKHGREYEQILNDLTEAVGRIPDSYEFFEMEAEDWDRLNPMGRQEVNEALAEDLFYALGTEPIITVGSGVVIYEPEQHRIYVLIGDEELTSVPLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEX5</accession>
    <name>E3EEX5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YwhD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ywhD</name>
        <name evidence="1" type="ORF">PPSC2_00555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368743.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13560"/>
    <dbReference type="EnsemblBacteria" id="ADO54098">
        <property type="protein sequence ID" value="ADO54098"/>
        <property type="gene ID" value="PPSC2_00555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.109"/>
    <dbReference type="eggNOG" id="ENOG502Z8XT">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133833_0_0_9"/>
    <dbReference type="OMA" id="LVWVTID"/>
    <dbReference type="OrthoDB" id="1682564at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014852">
        <property type="entry name" value="YwhD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08741">
        <property type="entry name" value="YwhD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="18708" checksum="FD3BC1B971034913" modified="2011-01-11" version="1">MSENQPDGKKQIALNIVSGKSKHKGFGAGSIDLNSMSPVIIDRGEAKIDIGAMHAKSKVERGIKFSTNKEDVPNGRQVWLVWVAVDRTPEGRMYGGATACEMLIDDEAKRGWKILADHVNRMDYALKRRFMLDDLGSEDKAALKSLLISHNEEWWDASPEELKQALEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFH1</accession>
    <name>E3EFH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Signal peptide protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_07110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370089.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20090"/>
    <dbReference type="EnsemblBacteria" id="ADO55462">
        <property type="protein sequence ID" value="ADO55462"/>
        <property type="gene ID" value="PPSC2_07110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1470"/>
    <dbReference type="eggNOG" id="COG5001">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_129_2_9"/>
    <dbReference type="OMA" id="LEVVGHQ"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033425">
        <property type="entry name" value="MASE3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17159">
        <property type="entry name" value="MASE3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="210"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="237"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="310"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="451"/>
            <end position="704"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="713" mass="81025" checksum="2E39279EEFB7B197" modified="2011-01-11" version="1">MNIRLEVKKTIGIGIAAIVLFVLVQLFHVTLNKIYSYNVFFLLYPIIGFACAAICFSIFYQSWSVLLEQLTWQRLLIAPTFLVAGLLYLVHIVSFSFVSLTDFALSPGISLWLLFVNRAFTSIMLLFVCSLPFRRTKSEYKTVALWAGIGCTLLILGVIKAYDAGLPDLRIRYELGNLGWTLNLVVMLLLVLTFIFGVRKYRKVRPAELGMLLIVRGIGLCVVSQLFYLFAKQMSDINHLIGLLTNVIAFYNLLSGLVRLMVLVPYREKQAAESEFNHIAYNDDITGLPNRRRLSQRLDKILRNSLKSDETVALLVLNIDRFKAINDSLGHTAGNYLLYAVGERLGHFCREGEAVFSMGGDEFAFLLMGYEDSDAMRNRIDDMVKLFDQPFDINGESYHVMVSVGIALYPSDANQSEQLIQQADTAVHSAKEQGVNFQRYASAMQMRAHERLQLENDLRRALENEEFSLVYQPRVHLQSGELTSLEALVRWNHPHRGMVMPGDFIPVAEESGLIVPLGEWVLREACLQNKQWQELGYPPIPISVNLSMRQFQQKKLVDVIRGILAYTGLEPRYLELEITESMTFDKDRAFEQLKKIKAIGVAISIDDFGTGYSSLHYLKNLPIDRLKIDRSFVNEVLIDSKNAAIVSTIASMAHHLKLKVTAEGVENEEQLQFLQAQDCHEGQGYYFSRPIPAEVFEKLFLRKPVNWLVQDGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN6</accession>
    <name>E3EFN6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Protein aroM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">aroM</name>
        <name evidence="1" type="ORF">PPSC2_07415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55527.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1550"/>
    <dbReference type="EnsemblBacteria" id="ADO55527">
        <property type="protein sequence ID" value="ADO55527"/>
        <property type="gene ID" value="PPSC2_07415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1533"/>
    <dbReference type="HOGENOM" id="CLU_2808415_0_0_9"/>
    <dbReference type="OrthoDB" id="1537462at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55527.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7403" checksum="6133B13BFFCEFAFB" modified="2015-05-27" version="2">MKRKQRFKMYKLGMITIGQSLLRSDVAPIVERALEGRAKLVQALGAAAGARLATMPGMTDDMFMNVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG31</accession>
    <name>E3EG31_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar FliJ protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fliJ</name>
        <name evidence="11" type="ORF">PPSC2_09875</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FliJ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370677.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22345"/>
    <dbReference type="EnsemblBacteria" id="ADO56064">
        <property type="protein sequence ID" value="ADO56064"/>
        <property type="gene ID" value="PPSC2_09875"/>
    </dbReference>
    <dbReference type="GeneID" id="66577940"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2081"/>
    <dbReference type="eggNOG" id="COG2882">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_139638_1_1_9"/>
    <dbReference type="OMA" id="WMDEISI"/>
    <dbReference type="OrthoDB" id="2000409at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012823">
        <property type="entry name" value="Flagell_FliJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02050">
        <property type="entry name" value="FliJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02473">
        <property type="entry name" value="flagell_FliJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0966">Cell projection</keyword>
    <keyword evidence="7" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="11" id="KW-0969">Cilium</keyword>
    <keyword evidence="11" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="17131" checksum="3950FE89BBA40610" modified="2011-01-11" version="1">MRFQYSFQKVVDLKTNEKSQAEWLLSSAVGQLQVEEQTLTQLIGERNRVISAIQKAAEDCAPLSSIQELQAYVNHLDQCITRKHRDVQYAQQNVQSKQTVLTDKMLDEQVWLKAREKANVKFQQEMLLREQNELDEMASVRFAMKAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG57</accession>
    <name>E3EG57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yisQ</name>
        <name evidence="2" type="ORF">PPSC2_10700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370856.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2278"/>
    <dbReference type="EnsemblBacteria" id="ADO56250">
        <property type="protein sequence ID" value="ADO56250"/>
        <property type="gene ID" value="PPSC2_10700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2266"/>
    <dbReference type="eggNOG" id="COG0534">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012893_5_3_9"/>
    <dbReference type="OMA" id="IAHACDE"/>
    <dbReference type="OrthoDB" id="1415498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006603">
        <property type="entry name" value="DinF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="322"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="355"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="464" mass="51387" checksum="E27BA9D761325258" modified="2011-01-11" version="1">MSLSQESGSKQAQAVKTMTVFAITWPIFIEMLFHILMGSVDTFMLSHVSDEVVSAVGVSRQLIEFTIILFNLLGLGVGVIIAQLLGAQKHVDASRVTASALTFNLVFGLALSLMFIVSRDFLLSFYHITPTIKENAEIYMMLAGGSLFLEALMLTAGPVIRSHGFTKDTMIVGIGMNILHVVGNALLIYGWFGLPQMGVAGAAISTVISRVVACVWIFILLYKRVSAPIRIQYYVQLQWSKLVAILKIGIPAGLEWLSYQLSQMMVTRFVSFMGTTAIATHFYTNTIVYFFMVFGMAVGEGTEIIVARLIGAGDKEKAYHQLLRSLKWSLVITIAVIVAVSFFRYEVMAIFTDEPAIIQLGAAILLFCILLEPGRVFNHVVINSLRAAGDVQFPLMMAIISMWGIKIPLAYVLGIHMGYGVLGVWIAHACDEWVRGIFHYLRWKGRKWQHKSLLSKAELQAESA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGA2</accession>
    <name>E3EGA2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alcohol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">adh3</name>
        <name evidence="2" type="ORF">PPSC2_12305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371196.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2623"/>
    <dbReference type="EnsemblBacteria" id="ADO56592">
        <property type="protein sequence ID" value="ADO56592"/>
        <property type="gene ID" value="PPSC2_12305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2611"/>
    <dbReference type="eggNOG" id="COG1064">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026673_20_1_9"/>
    <dbReference type="OMA" id="QYPGGYA"/>
    <dbReference type="OrthoDB" id="969875at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="4"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="296" mass="31555" checksum="E9E52FC4D59415BD" modified="2011-01-11" version="1">MCSGDASTISGAAPEYPRIPGHEVIGIVEQLGDEFTKWEIGQRVGTGYHSGDDHVTGLTMDGGYAEYMVAFEEALILIPDEVSSEEAAPLMCAGETTFSALRNSSARPGDLVAISGIGGLGHLAVQYAKKAGYQTVAISRGVQKENLAKELGAHFYIDSEKEDPAKALKALGGAKVILATAPNAEVISSLVNGLATEGELIIVAGSRERLELSAMDFLKGPHTVKGSFTGKAKEIEAAVRFSVLTDVRPIIEVFPLERASEAYEKMMAAKTRFRAVLSMSAENKANKSSPRKNEHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGA3</accession>
    <name>E3EGA3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 4">Thioredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">trxA3</name>
        <name evidence="7" type="ORF">PPSC2_12310</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the thioredoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371197.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2624"/>
    <dbReference type="EnsemblBacteria" id="ADO56593">
        <property type="protein sequence ID" value="ADO56593"/>
        <property type="gene ID" value="PPSC2_12310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2612"/>
    <dbReference type="eggNOG" id="COG3118">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090389_10_3_9"/>
    <dbReference type="OMA" id="CRVISPI"/>
    <dbReference type="OrthoDB" id="1630944at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000077">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01068">
        <property type="entry name" value="thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3 5" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="6">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="5">
        <location>
            <begin position="29"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00020570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000077-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="11728" checksum="080BFC091E303B64" modified="2011-01-11" version="1">MSATALTNQTFNNQIQSGITLVDFWAPWCGPCQIQLPIIHQLADDLKEKATIATINVDEQTELATRFGIRSIPALLLFQDGKLMDTMIGINQRDVLEAKILKLMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGD3</accession>
    <name>E3EGD3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ogt1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ogt1</name>
        <name evidence="3" type="ORF">PPSC2_00890</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368805.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13880"/>
    <dbReference type="EnsemblBacteria" id="ADO54161">
        <property type="protein sequence ID" value="ADO54161"/>
        <property type="gene ID" value="PPSC2_00890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.166"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033043_0_0_9"/>
    <dbReference type="OMA" id="VEYEPDN"/>
    <dbReference type="OrthoDB" id="1382732at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="22"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="446"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="448"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="589" mass="67715" checksum="02915D5AD16A6F17" modified="2011-01-11" version="1">MKGKHLRVSEPSPKIIALRFDASFFFEKAVRSLDRNHYDKALKYFRKAVEYEPDNPVNHCNMAGILSEMGDYAGSNEILSSVLSDVDSSMTECYFYMANNYANMEQFEEAEKALVTYLEEDEEGQFLDEAEEMMELLYYELDRPTKLNRIKARQGVVEHDQARVLLEEGKFAQAAQLLKQISEEQPDMFAARNNLALAYYYMGLFQNAKATIIQVLEDEPGNLHALCNLAIFYQHEGGGPELDRLVQTLAVTIPFQEEQVFKLATTMGILGRHEEAYRHFRRLLHGNGENNADASLYHYTAVAASNTGRYAEARRLWSHLQKQDASSEVPRFFLSRLEELQQEGTPLQVLSYHYHLPFEEQFRMWEKFGAEQVPDSMKKDPLIRSSFFWALRHGDRATQLQVIQALSLIGDDEVRQALESFVEDPDQESELKRRALQVLQELAEQEVQNTHTETEHPERLEAEKDPYTTEGDISASSVDPQWQAVLDKVLTVMSKSSDPAMQHDLRSLWQEYLDRLAPEVPMVQHTEGWAAALEYLTAKMHHHSVTYQEVADRYGISVSTVSRYARQIDSVCGIKQKLKQPLSTFKKQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGG4</accession>
    <name>E3EGG4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">7-cyano-7-deazaguanine synthase</fullName>
            <ecNumber evidence="1">6.3.4.20</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">7-cyano-7-carbaguanine synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">PreQ(0) synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Queuosine biosynthesis protein QueC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">queC</name>
        <name evidence="2" type="ORF">PPSC2_01045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>7-carboxy-7-deazaguanine + ATP + NH4(+) = 7-cyano-7-deazaguanine + ADP + H(+) + H2O + phosphate</text>
            <dbReference type="Rhea" id="RHEA:27982"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:45075"/>
            <dbReference type="ChEBI" id="CHEBI:61036"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="1">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; 7-cyano-7-deazaguanine biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the QueC family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.20" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368835.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0205"/>
    <dbReference type="EnsemblBacteria" id="ADO54192">
        <property type="protein sequence ID" value="ADO54192"/>
        <property type="gene ID" value="PPSC2_01045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.197"/>
    <dbReference type="eggNOG" id="COG0603">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081854_0_0_9"/>
    <dbReference type="OMA" id="QDPIKYV"/>
    <dbReference type="OrthoDB" id="1681374at2"/>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01995">
        <property type="entry name" value="ExsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01633">
        <property type="entry name" value="QueC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018317">
        <property type="entry name" value="QueC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42914">
        <property type="entry name" value="PTHR42914"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06508">
        <property type="entry name" value="QueC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006293">
        <property type="entry name" value="ExsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00364">
        <property type="entry name" value="TIGR00364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="9"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="24641" checksum="9AC20A24277E7683" modified="2011-01-11" version="1">MNKKALVVFSGGQDSTTCLLWALKEYDEVQTVSFQYGQRHKLELECASEIAKELNVKHHVLDLNLLNQLAPNALTREDIEIEAGSEGALPNTFVDGRNMLFLSFAAILAKQLGYYHIITGVCQTDFSGYPDCRDVFVKSLNVTLNLSMDYNFVIHTPLMWLNKKQTWELADQLGHLDFVRTKTLTCYNGIIGDGCGECPACLLRRAGLEQYLQERGNTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGM2</accession>
    <name>E3EGM2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Spore gernimation protein GerC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yndF3</name>
        <name evidence="5" type="ORF">PPSC2_03440</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369298.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16235"/>
    <dbReference type="EnsemblBacteria" id="ADO54661">
        <property type="protein sequence ID" value="ADO54661"/>
        <property type="gene ID" value="PPSC2_03440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.671"/>
    <dbReference type="eggNOG" id="ENOG502ZT3R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051140_0_1_9"/>
    <dbReference type="OMA" id="KRESTMF"/>
    <dbReference type="OrthoDB" id="1421701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02887">
        <property type="entry name" value="spore_ger_x_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168195" evidence="4">
        <location>
            <begin position="26"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="399" mass="44992" checksum="A8C2FE1CF87D791E" modified="2011-01-11" version="1">MCRRSFLSLLLAFILLVTQVGCWSSKEVEELSIYTGLALDKGELSPLEQELEKKGSRYFKKNTITTSVQIVPKKSSGSTNQQGGDGGQELNYVNIAGTGDSILEIFRQLSLRLDRPVIGHHLKVIVVSTELAKLQTMQQLMDFVLRDNDIRPSCMVFLSKDRAANTLVTKYTGEIPSIHILNMLRNHFRTSKVMRGVNLSELDGLMHSKKSYILQNITESKGELEFSGAGIIKGETGHWIGALGQQDVESIGWITGDVEGGAVKTYDKRNEAITYEIKSVKSKITTKVGKDDDISFHVKIESKGRLIENWDEKVDPTETRNMKEAEQEFEKQVTRRIKSLMHKLQSEYKVDVAGFGDHLKIDKPQVWKKVKDDWDYKFSKIPVTFDIKLTITDLGSSAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGY0</accession>
    <name>E3EGY0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Lantibiotic biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">spaC1</name>
        <name evidence="1" type="ORF">PPSC2_07475</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370167.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20445"/>
    <dbReference type="EnsemblBacteria" id="ADO55540">
        <property type="protein sequence ID" value="ADO55540"/>
        <property type="gene ID" value="PPSC2_07475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1545"/>
    <dbReference type="eggNOG" id="COG4403">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_049438_0_1_9"/>
    <dbReference type="OMA" id="CHGWAGA"/>
    <dbReference type="OrthoDB" id="393144at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd04793">
        <property type="entry name" value="LanC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033889">
        <property type="entry name" value="LanC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007822">
        <property type="entry name" value="LANC-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05147">
        <property type="entry name" value="LANC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01950">
        <property type="entry name" value="LANCSUPER"/>
    </dbReference>
    <dbReference type="SMART" id="SM01260">
        <property type="entry name" value="LANC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="453" mass="50766" checksum="CE2546701D2332DD" modified="2011-01-11" version="1">MKTGQFVMEVCDQLQAKDFSTTIALRLSNPESVYKAVHAEQNISPETKYHPWGETSLSHGYPGNIFLLSQCRASDSTYDWNQAIYLNMKHIQASLAKSGLNDVSLYSGWTGIASSVREASNHGEYYSHFLQQIHEWMIPLTEQWLQLNTAQLALHEGMPLQSFDTISGATGIGRYIVMNSTDPSCTPLVEPILQFLTDLTYPIKIHNRYVPGWYSPQKFQFLDRDKRNYPMGNFNCGMAHGIPGPLALLSVAYNSGIEVKGQYQAIETITEWLLKYKNEDTYGYYWPHIVPFEAETGSLQFDLNRAREAWCYGTPGVACSLFLAGKALHDEVLQKMAVKACIGAISYEVAKREMDSSALCHGLAGLLTISWRMWCHSKEPAFIPLIQQLTSQLIDRFQADSPLGYLDPEPRADSSLAWLTKAGLLEGVAGIASALLSVSQNKEMPWDYTLMLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH80</accession>
    <name>E3EH80_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GTP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370489.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EH80"/>
    <dbReference type="STRING" id="1406.LK13_21430"/>
    <dbReference type="EnsemblBacteria" id="ADO55871">
        <property type="protein sequence ID" value="ADO55871"/>
        <property type="gene ID" value="PPSC2_08965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1889"/>
    <dbReference type="eggNOG" id="COG1306">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030168_0_0_9"/>
    <dbReference type="OMA" id="RPWIQDF"/>
    <dbReference type="OrthoDB" id="272884at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025275">
        <property type="entry name" value="DUF4015"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13200">
        <property type="entry name" value="DUF4015"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4015" evidence="1">
        <location>
            <begin position="69"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="392" mass="43771" checksum="2E89617F2B6DA3F0" modified="2011-01-11" version="1">MNMIWAIMLFAMGIGGNGDSSANAPNVKETVATTIGSAMIQAQHSNLKVDASNPPVKIDPQPTTPAIKGIYVTAYSAGGSRMTQLLELLDKTELNSMVIDIKDDAGYITYPTTNPELLKLGKPQKFIKDIFGLMDRLKKHNVYPIARIVVFKDTVLANKNPEMSFRNADDSVWKNGKGDGFVNPYNKEVWDYNIAIAKEAAKLGFKEIQFDYVRFPEGFEKRADKLKYTKSDQSRSDTVAEFVQYARKELAPLGVRVSVDIFGYAASVPAAEGIGQDFTKISENVDVISPMVYPSHYTTGWFGVKDPDKNPYQTIKGSMADTHKKLNPTGKLKPIIRPWIQDFTASWLGSGHYAKYGKTQVEDQIRALKDMKVDEYLLWNATNRYTSGVTYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHT4</accession>
    <name>E3EHT4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GTPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">COBW3</name>
        <name evidence="5" type="ORF">PPSC2_11150</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. CobW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370951.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23545"/>
    <dbReference type="EnsemblBacteria" id="ADO56346">
        <property type="protein sequence ID" value="ADO56346"/>
        <property type="gene ID" value="PPSC2_11150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2361"/>
    <dbReference type="eggNOG" id="COG0523">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017452_1_4_9"/>
    <dbReference type="OMA" id="IDVENWE"/>
    <dbReference type="OrthoDB" id="1267701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036627">
        <property type="entry name" value="CobW-likC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="cobW" evidence="3">
        <location>
            <begin position="3"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="CobW C-terminal" evidence="4">
        <location>
            <begin position="276"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="230"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="364" mass="41152" checksum="C34076C10083590D" modified="2011-01-11" version="1">MIPIVVLSGFLGSGKTTLLQHALAYYKEQGLKPAILMNELGDVNLDGSLVNDQAPMKEMLSGCICCTIRGDLGVELMNLAEEYKPDVIIVECTGVANPMEIVDAVTDASIYSSMVLQSVITVMDARQFLDFSLGSERSKSFRLMQDQLRCASKLIINKTDLLAAGELQKVQAFVKELNPYALTVSTERSDVDPVTFFSIQGEKRMEISRQKESTVDIGNDHHYAEDRLHTYGHDDHTDHHPHDCQEPEHHDHDHDHKHGEHYHSYDHVVVHTHFFGQPVSRFEFEQLFRSLPAEIYRAKGIVRFLESEGQMMFQFAYRELEIIPIRPQKPVNDVAVIMGENFSASEIEERLKRLEAAAKPLASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI49</accession>
    <name>E3EI49_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">M1-869</name>
        <name evidence="4" type="ORF">PPSC2_03695</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369353.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0734"/>
    <dbReference type="EnsemblBacteria" id="ADO54717">
        <property type="protein sequence ID" value="ADO54717"/>
        <property type="gene ID" value="PPSC2_03695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.727"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041141_5_1_9"/>
    <dbReference type="OMA" id="RLPPVMF"/>
    <dbReference type="OrthoDB" id="1654295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028349">
        <property type="entry name" value="PafC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016838">
        <property type="entry name" value="PafC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00420">
        <property type="entry name" value="HTH_DEOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="3">
        <location>
            <begin position="2"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="34780" checksum="8DFC39AA81936068" modified="2011-01-11" version="1">MPLSRQFEIVYMLLHKKKVTADELAEHFEVSTRTIYRDIDALSAAGIPIYSSRGKGGGISLMEGYVFNTSLLSEQEQDDILMALQSVATATIPQVEEVLNKLSRLFKKEMGNWIEVDFSPWGSQNSQRQLFTLIRNAIITNRVIKFRYYNVAGEQSYRSIEPAKLLFKDKSWYVEGYCLNTESYRVFKISRMKEIVVTEISYEPRTVVAATDTKMNDLLHTIEVTLHISAQGAYRVYDEFAEKTITQREDGSYTVTAQFPVGNWLDSYLLSFGPLLIEVSPEQVRTRILSHLETMKRNLNDPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI88</accession>
    <name>E3EI88_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Holo-[acyl-carrier-protein] synthase</fullName>
            <shortName evidence="9">Holo-ACP synthase</shortName>
            <ecNumber evidence="9">2.7.8.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">4'-phosphopantetheinyl transferase AcpS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">acpS</name>
        <name evidence="11" type="ORF">PPSC2_03865</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>apo-[ACP] + CoA = adenosine 3',5'-bisphosphate + H(+) + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9690"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:58343"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="EC" id="2.7.8.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the P-Pant transferase superfamily. AcpS family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the P-Pant transferase superfamily. Gsp/Sfp/HetI/AcpT family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.7" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369392.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16680"/>
    <dbReference type="EnsemblBacteria" id="ADO54756">
        <property type="protein sequence ID" value="ADO54756"/>
        <property type="gene ID" value="PPSC2_03865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.765"/>
    <dbReference type="eggNOG" id="COG0736">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089696_1_2_9"/>
    <dbReference type="OMA" id="DERHYAV"/>
    <dbReference type="OrthoDB" id="1893660at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008897">
        <property type="term" value="F:holo-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00101">
        <property type="entry name" value="AcpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008278">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037143">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002582">
        <property type="entry name" value="ACPS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004568">
        <property type="entry name" value="Ppantetheine-prot_Trfase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01648">
        <property type="entry name" value="ACPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56214">
        <property type="entry name" value="SSF56214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00516">
        <property type="entry name" value="acpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00556">
        <property type="entry name" value="pantethn_trn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 9" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="5 9" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACPS" evidence="10">
        <location>
            <begin position="4"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="134" mass="14678" checksum="0FD9A7F7A331017E" modified="2011-01-11" version="1">MIYGIGHDVLEISRMAHILAGKYADAFLNRVLTPAERELAVERKGRLAEFVAGRFAAKEAITKAFGCGIGQIIGFSDMEILPEPGGKPVVYLSSSAWDRLRLPNTGDSNYSIHLSITHQPNIASAFVIVEYKET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIC4</accession>
    <name>E3EIC4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phzA</name>
        <name evidence="2" type="ORF">PPSC2_06065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369869.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19030"/>
    <dbReference type="EnsemblBacteria" id="ADO55237">
        <property type="protein sequence ID" value="ADO55237"/>
        <property type="gene ID" value="PPSC2_06065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1243"/>
    <dbReference type="eggNOG" id="COG1335">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068979_5_5_9"/>
    <dbReference type="OMA" id="SEFCVDT"/>
    <dbReference type="OrthoDB" id="1442962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isochorismatase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="19971" checksum="0C17FA8A68E4EB43" modified="2011-01-11" version="1">MGQTVLLLIDVQQAMFMYDEKLYREQEVVAHLQQLLTEARTIGTPVIFVQHTDEADEDFRENSVGWAIADVVRPLPHERIVRKSSWDSFYQTELRDVLQELGAEQLIIAGMQTEFCLDTTCRSAYSLGYQNNVLVSDAHSTFDSKVLSGEQIVAHHNAVLGNRFARLLTTADVHFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EID5</accession>
    <name>E3EID5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Co-chaperonin GroES</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">10 kDa chaperonin</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Chaperonin-10</fullName>
            <shortName evidence="3">Cpn10</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">groES</name>
        <name evidence="5" type="synonym">groES2</name>
        <name evidence="3" type="synonym">groS</name>
        <name evidence="5" type="ORF">PPSC2_06120</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 4">Belongs to the GroES chaperonin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429271.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19085"/>
    <dbReference type="EnsemblBacteria" id="ADO55248">
        <property type="protein sequence ID" value="ADO55248"/>
        <property type="gene ID" value="PPSC2_06120"/>
    </dbReference>
    <dbReference type="GeneID" id="66573716"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1255"/>
    <dbReference type="eggNOG" id="COG0234">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_132825_2_0_9"/>
    <dbReference type="OMA" id="RSINMTI"/>
    <dbReference type="OrthoDB" id="1965002at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00320">
        <property type="entry name" value="cpn10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.33.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00580">
        <property type="entry name" value="CH10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020818">
        <property type="entry name" value="Chaperonin_GroES"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037124">
        <property type="entry name" value="Chaperonin_GroES_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10772">
        <property type="entry name" value="PTHR10772"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00166">
        <property type="entry name" value="Cpn10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00297">
        <property type="entry name" value="CHAPERONIN10"/>
    </dbReference>
    <dbReference type="SMART" id="SM00883">
        <property type="entry name" value="Cpn10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00580"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10130" checksum="F465623FBA8FEC26" modified="2011-01-11" version="1">MIKPLGERVLVEAIEQETTTSFGIVLPDSAKEKPQEGKIIAVGAGALKDGARIPLEVKEGDRVIFSKYAGTEIKYEGKEYLIMKESDIHAIIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIU8</accession>
    <name>E3EIU8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydeC</name>
        <name evidence="5" type="ORF">PPSC2_09415</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370584.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21885"/>
    <dbReference type="EnsemblBacteria" id="ADO55967">
        <property type="protein sequence ID" value="ADO55967"/>
        <property type="gene ID" value="PPSC2_09415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1985"/>
    <dbReference type="eggNOG" id="COG1917">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2169">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="OMA" id="MSEGHFC"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="194"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="306" mass="35262" checksum="A20B03C34164C191" modified="2011-01-11" version="1">MQREMLRENRIHGNPMYPVSVYPSVEQLNGNRILESHWHEEMEFIVVEQGSAVFQTDMIYTEVSEGEALFVNSGELHAGYLQKSPRCVFSAVVFHPDMLHSRTQDTVQTQFIEPFIHKKLVPPPHIRGVQSWEQELLTALKRIITSHEQNAPARELTTKAQLYSIIACLFPHMTPANGEDVVMASQRNKIERIKKALAYINSHAHEPIRLREISDEVGMSEGHFCRFFKQMVQKSPVEYINYQRIQKACRLLEQSDRKVVDIALDVGFENLSYFIATFKKWNGLTPSLYRKQHEADQALAVPAITD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIY4</accession>
    <name>E3EIY4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Beta-galactosidase</fullName>
            <shortName evidence="6">Beta-gal</shortName>
            <ecNumber evidence="3 6">3.2.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">pbg</name>
        <name evidence="13" type="ORF">PPSC2_09590</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.</text>
            <dbReference type="EC" id="3.2.1.23"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the glycosyl hydrolase 42 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370620.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22055"/>
    <dbReference type="CAZy" id="GH42">
        <property type="family name" value="Glycoside Hydrolase Family 42"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56003">
        <property type="protein sequence ID" value="ADO56003"/>
        <property type="gene ID" value="PPSC2_09590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2021"/>
    <dbReference type="eggNOG" id="COG1874">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012430_1_1_9"/>
    <dbReference type="OMA" id="SRRHYCF"/>
    <dbReference type="OrthoDB" id="831762at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009341">
        <property type="term" value="C:beta-galactosidase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004565">
        <property type="term" value="F:beta-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013739">
        <property type="entry name" value="Beta_galactosidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013738">
        <property type="entry name" value="Beta_galactosidase_Trimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003476">
        <property type="entry name" value="Glyco_hydro_42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013529">
        <property type="entry name" value="Glyco_hydro_42_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36447">
        <property type="entry name" value="PTHR36447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02449">
        <property type="entry name" value="Glyco_hydro_42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08533">
        <property type="entry name" value="Glyco_hydro_42C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08532">
        <property type="entry name" value="Glyco_hydro_42M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001084">
        <property type="entry name" value="B-galactosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Glyco_hydro_42" evidence="10">
        <location>
            <begin position="14"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_42M" evidence="11">
        <location>
            <begin position="397"/>
            <end position="607"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_42C" evidence="12">
        <location>
            <begin position="616"/>
            <end position="673"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="307"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="160"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="315"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR001084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO56003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="675" mass="77203" checksum="058EC47D600A3EBC" modified="2011-01-11" version="1">MISSKLPKVFYGGDYNPEQWDEATHQEDLRMFRQAGIDIATLNVFSWAKIQSDEITYHFEWLDQLIDNLYESDIFVCLATSTAAHPAWMATRYPDILRVDADGRKRKFGGRHNSCPNSPTYRKYAEQMADRLAERYKDHPAILVWHVSNEYGGDCYCDNCAAAFRVWLKQKYESLEELNRVWNTSFWGHTFYDWDEIVPPNNLSEHWGENHSTFQGISLDYARFNSDSMLDCYLLEYNAIKKHIPDAVVTTNLMGFFKQLDYFKWAKHMDIVSWDSYPGANTPISYTAMAHDLMRGLKDGQPFMLMEQTPSQQNWQAYNSLKRPGVMRLWSYQAVAHGADTVMFFQLRRSIGACEKFHGAVIEHAGHENTRVFREVAQLGNELGALGNTLLDATVHAKVAILFDWDNWWALEKSSGPSVALKYLDQVHKYYATLFRRNVQVDLISVDTDFQKYDLIIAPVLYMVKPSTAEKLEQFTERGGTFLTTFFSGIVNENDLVTTGGYPGKLRNLLGIWVEEIDALLPESHNRIILKEKVGVLEGEYKCGLLCDLLHSEGAEVLAEYGDDFYQGMPVLTRNRFGQGEAWYVATDPEEPFLDGLLGYICEQKGISSLLRAPAGIEATMRSKDGKSYLFVLNHNAQTQQYHLDDQKGKELISGKFLEGDICIEGYGFQVLELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ14</accession>
    <name>E3EJ14_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_10480</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370801.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2223"/>
    <dbReference type="EnsemblBacteria" id="ADO56195">
        <property type="protein sequence ID" value="ADO56195"/>
        <property type="gene ID" value="PPSC2_10480"/>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.2213"/>
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    <dbReference type="OrthoDB" id="2208943at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169277" evidence="2">
        <location>
            <begin position="21"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="118"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="125"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="15304" checksum="DBB5421CC951DB87" modified="2011-01-11" version="1">MVYATCYTYNGAALGTSVSAASVVPSADTSVSVSASEALTKDQTTSQATVDQSEQEAQKVVAKYLIAVHEKNFSDAVSLVKDSWYLSEEKQIQKYEEYSNRTDFDKIEVVGTQKESNSSVAVTIKEDGKKQKIESNQRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ96</accession>
    <name>E3EJ96_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">DNA methyltransferase</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_11340</name>
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        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_11340"/>
    </dbReference>
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    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06445">
        <property type="entry name" value="ATase"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036217">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNAb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01035">
        <property type="entry name" value="DNA_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46767">
        <property type="entry name" value="SSF46767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA_binding_1" evidence="1">
        <location>
            <begin position="3"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="107" mass="12274" checksum="AE367D38F6F88465" modified="2011-01-11" version="1">MQPFTARVLQIILLIPEGKVMTYGQIAAEAGSPRGARQVVRILHTLSQKHRLPWHRVVNRLGEIALQEDESASLQRLYLEEEGIQFNANGRIPLDQYLYHPQTETEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ97</accession>
    <name>E3EJ97_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
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        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370989.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56384">
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        <property type="gene ID" value="PPSC2_11345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2400"/>
    <dbReference type="eggNOG" id="ENOG50306CP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2899908_0_0_9"/>
    <dbReference type="OMA" id="MIKESRM"/>
    <dbReference type="OrthoDB" id="1991245at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="7442" checksum="DC711103DC60D8C4" modified="2011-01-11" version="1">MIKESRMTTTNEPSDLWMTRFLRESEQKKKQLIREARKNNDIPLMNSISFHLAQRDQQHLIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJN1</accession>
    <name>E3EJN1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385816.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0007"/>
    <dbReference type="EnsemblBacteria" id="ADO59402">
        <property type="protein sequence ID" value="ADO59402"/>
        <property type="gene ID" value="PPSC2_28045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5945"/>
    <dbReference type="HOGENOM" id="CLU_1254938_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="128"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="168"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="182"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="204"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="24813" checksum="474ABF6157464F03" modified="2011-01-11" version="1">MANKNQPNNESGKRKDNRRTFSVSKGFKNVHDVLDELPDNEMSRFVCEAILHYYQVKNNPNWMGEQIQQIFAMQTQLQQMISGFGGGFSPPPQYPAQGMQQQPYTVPFQQAPMQQPATMHPSFMQPGVQENVDVPPSQPSPSLPSVPEGEFPTAEQVVEHAMQQVMNEEVEAPVNESTNLPKDEVQTEKMDSTHADAQPKRRKKSSFGQNLIRTQLGQTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJN2</accession>
    <name>E3EJN2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DUF5698 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_28040</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="6 7">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
            <plasmid evidence="6 7">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385817.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0008"/>
    <dbReference type="EnsemblBacteria" id="ADO59403">
        <property type="protein sequence ID" value="ADO59403"/>
        <property type="gene ID" value="PPSC2_28040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5943"/>
    <dbReference type="eggNOG" id="COG4843">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_128643_0_0_9"/>
    <dbReference type="OMA" id="EFHAIME"/>
    <dbReference type="OrthoDB" id="1480783at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044035">
        <property type="entry name" value="DUF5698"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022930">
        <property type="entry name" value="UPF0316"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40060">
        <property type="entry name" value="PTHR40060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18955">
        <property type="entry name" value="DUF5698"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0614">Plasmid</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="DUF5698" evidence="5">
        <location>
            <begin position="24"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF18955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="19749" checksum="F056DE9A6703CAD0" modified="2011-01-11" version="1">MSTILILELLGVIAVNALSNSIGTLKTIFISKKYLKPAYVITFLDAIIFATALKQIASGNGVEFLIAFAIGKVIGVYLADVVENRLALGILETEIFLNDKDRMIEVADTLRDKGYTVNTFVSYGYKGVKRYKVDVTILRKEFPVLERILKEFNIENPTMQVKDISNIHGKITVSSVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJS8</accession>
    <name>E3EJS8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59676.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886196.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0285"/>
    <dbReference type="EnsemblBacteria" id="ADO59676">
        <property type="protein sequence ID" value="ADO59676"/>
        <property type="gene ID" value="PPSC2_26730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5650"/>
    <dbReference type="HOGENOM" id="CLU_1625462_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59676.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="19009" checksum="A666E2C12B7DE32F" modified="2015-05-27" version="2">MKFMPHKGDLQMIDTTEKENEAMAENFVGELIERDTGRTQFTEVRQDQTMGLLIEYLKQHRHLDSDDLYDTENKPVAIKPEDFHFLVDNMMDVAKRTNTIDTDESICFPNKLCYLKHDVNLIFFVMWGQGTCVQVYISDEDWRESSAITYEQVKASLLSNDAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK14</accession>
    <name>E3EK14_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNase H type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_26555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RNase H family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59723.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886296.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0332"/>
    <dbReference type="EnsemblBacteria" id="ADO59723">
        <property type="protein sequence ID" value="ADO59723"/>
        <property type="gene ID" value="PPSC2_26555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5601"/>
    <dbReference type="eggNOG" id="COG0328">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030894_2_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.970.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009027">
        <property type="entry name" value="Ribosomal_L9/RNase_H1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011320">
        <property type="entry name" value="RNase_H1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037056">
        <property type="entry name" value="RNase_H1_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002156">
        <property type="entry name" value="RNaseH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01693">
        <property type="entry name" value="Cauli_VI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00075">
        <property type="entry name" value="RNase_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55658">
        <property type="entry name" value="SSF55658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50879">
        <property type="entry name" value="RNASE_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase H type-1" evidence="2">
        <location>
            <begin position="68"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59723.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="25997" checksum="A01B847E078EEF57" modified="2015-05-27" version="2">MKFYAIRSGQDPITKKSVGGLILNSWDQAKEYVTGVKGAEYKSFEDEDAAKSFLQGDGSQVTKALEMQPDVLYCYVDGSYNNNIPNYSYGICAVLNEKVVHIQNGQGNNPDAIEMQQIGGELLGAITSLQYAKNNRHPQVVILHDYLGVAHHATGFWKRTNKYSERYFTWMQNFFSSNTDMKVNFVKVKAHTGNNFNEIADGLAKLAIGIKPDAIFYRMVEKHHVSLKDQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK36</accession>
    <name>E3EK36_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386159.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59745">
        <property type="protein sequence ID" value="ADO59745"/>
        <property type="gene ID" value="PPSC2_26455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5577"/>
    <dbReference type="HOGENOM" id="CLU_2495003_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="10361" checksum="DAC10D55A71B2AE6" modified="2011-01-11" version="1">MENKTRWIIFNKKGKRVSTQTLIHPDGRHYLQLEPFEQDLKKKGLYAQRAESFEQRSNAWNQYSFKKKLETLGWKFNQNGDVIADW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKC2</accession>
    <name>E3EKC2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59449.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886157.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0055"/>
    <dbReference type="EnsemblBacteria" id="ADO59449">
        <property type="protein sequence ID" value="ADO59449"/>
        <property type="gene ID" value="PPSC2_27815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5895"/>
    <dbReference type="eggNOG" id="COG1896">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114091_0_0_9"/>
    <dbReference type="OrthoDB" id="1508841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59449.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="24214" checksum="A75DD6D8C4E49153" modified="2015-05-27" version="2">MFLGTYLSKIRGLMNLKRYQNLYVFKQRSVAEHSWSVAKIAQSLAYLEMDKFGHDVDMGVLLQKAITHDELELITGDILSHTKRRTPAMRQAVDELEAIIYEEEYGAKILPENWMEQFRTFTLEAKDDTIEGKILGAADVIDTILESTEEIKLGNLEYFTDVLQSSAEKLITIDLDSVRYFLKYSLPDFGLDIHQYYGENVVQAIKEIEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKT2</accession>
    <name>E3EKT2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_27425</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="14 15">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
            <plasmid evidence="14 15">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the transposase 35 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the transposase 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385947.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0139"/>
    <dbReference type="EnsemblBacteria" id="ADO59533">
        <property type="protein sequence ID" value="ADO59533"/>
        <property type="gene ID" value="PPSC2_27425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5805"/>
    <dbReference type="eggNOG" id="COG0675">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032903_0_0_9"/>
    <dbReference type="OMA" id="DTCRQVY"/>
    <dbReference type="OrthoDB" id="222391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001959">
        <property type="entry name" value="Transposase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010095">
        <property type="entry name" value="Transposase_IS605_OrfB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021027">
        <property type="entry name" value="Transposase_put_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12323">
        <property type="entry name" value="HTH_OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01385">
        <property type="entry name" value="OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07282">
        <property type="entry name" value="OrfB_Zn_ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01766">
        <property type="entry name" value="tspaseT_teng_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-0614">Plasmid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="HTH_OrfB_IS605" evidence="13">
        <location>
            <begin position="24"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_IS605" evidence="11">
        <location>
            <begin position="184"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_Zn_ribbon" evidence="12">
        <location>
            <begin position="309"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF12323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO59533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="44877" checksum="519AF1D4A6A81550" modified="2011-01-11" version="1">MQLRQDFLSENLIRQDFSTKNLNHKAYKFRIYPNREQQQLIRHMFGCCRFVFNHFLAMWNDSYAATGKGLSYNTCATGLPNLKQQYNWLKKVDSIALQSAVRNVADSFDRFFKKQTQAPRFKSRKHPVQSYTTKYTNGNIAIQTNQLKLPKLGWIRFAKSRALKGRILSATVRRNAAGKYFVSIVCEVEIKPLPQSSKEIGIDLGLKDFAVCSDGVRVANPKVFRKYEQKLAFWQRWLARRTKDGSNWQKAKLKMALIHERIANIRHDFLHKLSTKLIRENQTLSIEDLKVSNMLKNHKLAKSIADASWSEFRRQLTYKAEWYGRILKMVDTFAPTSQACHRCGAINPEVKNLQVRQWTCPSCHATHDRDENAAQNIKQMGLIWSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL54</accession>
    <name>E3EL54_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27065</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59616.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0223"/>
    <dbReference type="EnsemblBacteria" id="ADO59616">
        <property type="protein sequence ID" value="ADO59616"/>
        <property type="gene ID" value="PPSC2_27065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5723"/>
    <dbReference type="eggNOG" id="ENOG50333SB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1249615_0_0_9"/>
    <dbReference type="OMA" id="IVFTEER"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169312" evidence="2">
        <location>
            <begin position="30"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="26"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="26"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="25067" checksum="9E820A78DD9CF7A1" modified="2011-01-11" version="1">MNIIFKITSFTLLAGVLFLTGCSPSDTEKQTQEVTPPKQQEQSQKLDSEKQPAKGELKITDAQKVQAYVDEQNRKMEAMSQEVDYYKQYAKDMILILPSDKVQELINKEYHYAVTINNIQFPQSGVLEIRETAFDIVFTEERVKFSVLPESESVKGKIPTDLEDAVSTSASPQTKDEDGKTILTYSYKDLKPGERISFKISDELKKKLSVNTNDLVVKVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELB3</accession>
    <name>E3ELB3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386359.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0556"/>
    <dbReference type="EnsemblBacteria" id="ADO59945">
        <property type="protein sequence ID" value="ADO59945"/>
        <property type="gene ID" value="PPSC2_28455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6036"/>
    <dbReference type="HOGENOM" id="CLU_2181299_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12329" checksum="524BDA6B266A68DE" modified="2011-01-11" version="1">MPFMNPIAVDNPFYAMGGMHKIARGISGHLVEEPNNSVCIPAFYAIVTGKGHTGRFIDDLKAKYRIVRFPSIINPVLEGMLERRGFKKKRQYVEVLKGKTEVYVWSATI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC21</accession>
    <name>A0A0D5ZC21_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cold-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016822696.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11745"/>
    <dbReference type="EnsemblBacteria" id="AKA44325">
        <property type="protein sequence ID" value="AKA44325"/>
        <property type="gene ID" value="PPSC2_24220"/>
    </dbReference>
    <dbReference type="GeneID" id="66575222"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5128"/>
    <dbReference type="HOGENOM" id="CLU_197449_0_0_9"/>
    <dbReference type="OrthoDB" id="1995338at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025916">
        <property type="entry name" value="YdjO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14169">
        <property type="entry name" value="YdjO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="70" mass="8002" checksum="963F2B24DB0930BD" modified="2015-05-27" version="1">MYRRQAPEIIPEENTAIWSCTNEGCNGWMRTDFTFLSEPACPLCQATMGQEMRMLPILNRTGNSFVAQRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCB1</accession>
    <name>A0A0D5ZCB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3497"/>
    <dbReference type="EnsemblBacteria" id="AKA44283">
        <property type="protein sequence ID" value="AKA44283"/>
        <property type="gene ID" value="PPSC2_16370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3494"/>
    <dbReference type="HOGENOM" id="CLU_2772064_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="8146" checksum="2406DFA36D29B6BF" modified="2015-05-27" version="1">MQPTCWTRWSVYEYMKHRFVCTGEVPDERELLEELPDIDKSELIEGMAEFRLILGDWPIAGSDKPCEVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCG1</accession>
    <name>A0A0D5ZCG1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324920.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44328">
        <property type="protein sequence ID" value="AKA44328"/>
        <property type="gene ID" value="PPSC2_25160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5333"/>
    <dbReference type="eggNOG" id="ENOG50307C0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1913382_0_0_9"/>
    <dbReference type="OrthoDB" id="1917053at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="118" mass="13574" checksum="3D822C84D3D67D5B" modified="2015-05-27" version="1">MRRIVVSGNTYLWNYRTVRDIYCRSKLTIISENKDIKFIILFTTKDTIVTGSPLNEGLRVMKEGKQYSINLNQPKYVAEVLQYILGMELDVTVKKVHELNGNELLVSMGYQDVTGLLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-10-07" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4B9</accession>
    <name>E3E4B9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tnpA3</name>
        <name evidence="7" type="ORF">PPSC2_12630</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transposase 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2692"/>
    <dbReference type="EnsemblBacteria" id="ADO56659">
        <property type="protein sequence ID" value="ADO56659"/>
        <property type="gene ID" value="PPSC2_12630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2682"/>
    <dbReference type="eggNOG" id="COG4644">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1395142_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002513">
        <property type="entry name" value="Tn3_Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01526">
        <property type="entry name" value="DDE_Tnp_Tn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0814">Transposable element</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="DDE_Tnp_Tn3" evidence="6">
        <location>
            <begin position="29"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="22215" checksum="D5614BA83CA5C76F" modified="2011-01-11" version="1">MSEINSLNLRYNSHLRERMGHFPDRITDGYGCNLGPAQTSKHMRSLVTPHMLSFVNRRHVTAQKIDAAIRDILNQYNTLSLPKLWGDGKTAAADGTMFDLYEENLLSEYHIRYGGYGGIAYHHISDTYIALFSHFIPCGVWEAVYIIDGLLKNKSSIYKLNSRVAAAFCFNNICFCPNQKPRTDIVSRKNKNMYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4F5</accession>
    <name>E3E4F5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Diacylglycerol kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugtP3</name>
        <name evidence="7" type="ORF">PPSC2_12770</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyltransferase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371299.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2728"/>
    <dbReference type="CAZy" id="GT28">
        <property type="family name" value="Glycosyltransferase Family 28"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56695">
        <property type="protein sequence ID" value="ADO56695"/>
        <property type="gene ID" value="PPSC2_12770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2719"/>
    <dbReference type="eggNOG" id="COG0707">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028367_0_1_9"/>
    <dbReference type="OrthoDB" id="1165736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009247">
        <property type="term" value="P:glycolipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009695">
        <property type="entry name" value="Diacylglyc_glucosyltr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06925">
        <property type="entry name" value="MGDG_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MGDG_synth" evidence="6">
        <location>
            <begin position="18"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_tran_28_C" evidence="5">
        <location>
            <begin position="231"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="377" mass="42235" checksum="94BBF7C98CD2FEB9" modified="2011-01-11" version="1">MRQEPQILILTADYGEGHHQVSKVLQQSLIRNGYSEVAVVDLFREAYPVLNKIIRFLYRQSPHAASLGIPYYGWIYHLTNRLPMKGKIAAWMNSLGGDRLKKIILHYQPEVIIYTFPFGSLPSSEALSAIRPRTAVVITDFDVHRRWLFAKPDHYFVPASDVKEAMIRQGVPESRITVTGIPVRESFYDAAMIGSSSVKEADEHVILLMANVCGTLQSLSRLIGKLLLLSGVRIQVICGRQKRWRRRLTESWADDARVDVFGFTYQLHVLMSSACCVITKAGGVTLSETIQAGVPIFILNPFLGQEKENALYLQRKGAAAVAFTIHDLVLQIQAMISSEPIKQSMMNGLLAARQKTSADHIVRHLFPEASPLRRGGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4S1</accession>
    <name>E3E4S1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Methylglyoxal synthase</fullName>
            <shortName evidence="1">MGS</shortName>
            <ecNumber evidence="1">4.2.3.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 4" type="primary">mgsA</name>
        <name evidence="4" type="ORF">PPSC2_14465</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>dihydroxyacetone phosphate = methylglyoxal + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17937"/>
            <dbReference type="ChEBI" id="CHEBI:17158"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="EC" id="4.2.3.3"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the methylglyoxal synthase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.3" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371648.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02115"/>
    <dbReference type="EnsemblBacteria" id="ADO57049">
        <property type="protein sequence ID" value="ADO57049"/>
        <property type="gene ID" value="PPSC2_14465"/>
    </dbReference>
    <dbReference type="GeneID" id="66577087"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3087"/>
    <dbReference type="eggNOG" id="COG1803">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120420_1_0_9"/>
    <dbReference type="OMA" id="FAWRELV"/>
    <dbReference type="OrthoDB" id="1726279at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008929">
        <property type="term" value="F:methylglyoxal synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019242">
        <property type="term" value="P:methylglyoxal biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01422">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00549">
        <property type="entry name" value="Methylglyoxal_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004363">
        <property type="entry name" value="Methylgl_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018148">
        <property type="entry name" value="Methylglyoxal_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011607">
        <property type="entry name" value="MGS-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036914">
        <property type="entry name" value="MGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30492">
        <property type="entry name" value="PTHR30492"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02142">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006614">
        <property type="entry name" value="Methylglyox_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00851">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52335">
        <property type="entry name" value="SSF52335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00160">
        <property type="entry name" value="MGSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01335">
        <property type="entry name" value="METHYLGLYOXAL_SYNTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51855">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MGS-like" evidence="3">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="1">
        <location>
            <begin position="35"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="1">
        <location>
            <begin position="55"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="1 2">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR006614-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16374" checksum="51A8F9A84870C0BF" modified="2011-01-11" version="1">MLKIAFIAHDRKKDEMVNFITAYEHVFTDHQLYSTGTTGQRIMEQTKLQIHRFMSGPLGGDQQIGAMVAQNDMDLIIFLRDPLMAQPHEPDISALLRLCDVQGIPLATNVATAEILVKALDRGDFAWRELVHKYKPGIDQQGDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4T7</accession>
    <name>E3E4T7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Prephenate dehydrogenase</fullName>
            <ecNumber evidence="4">1.3.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">tyrA</name>
        <name evidence="10" type="ORF">PPSC2_14540</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>NAD(+) + prephenate = 3-(4-hydroxyphenyl)pyruvate + CO2 + NADH</text>
            <dbReference type="Rhea" id="RHEA:13869"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:29934"/>
            <dbReference type="ChEBI" id="CHEBI:36242"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.3.1.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-tyrosine biosynthesis; (4-hydroxyphenyl)pyruvate from prephenate (NAD(+) route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the prephenate/arogenate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.12" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371662.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02190"/>
    <dbReference type="EnsemblBacteria" id="ADO57065">
        <property type="protein sequence ID" value="ADO57065"/>
        <property type="gene ID" value="PPSC2_14540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3103"/>
    <dbReference type="eggNOG" id="COG0287">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055968_2_1_9"/>
    <dbReference type="OMA" id="MWRDICL"/>
    <dbReference type="OrthoDB" id="533829at2"/>
    <dbReference type="UniPathway" id="UPA00122">
        <property type="reaction ID" value="UER00961"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008977">
        <property type="term" value="F:prephenate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004665">
        <property type="term" value="F:prephenate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006571">
        <property type="term" value="P:tyrosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003099">
        <property type="entry name" value="Prephen_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02153">
        <property type="entry name" value="PDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51176">
        <property type="entry name" value="PDH_ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0827">Tyrosine biosynthesis</keyword>
    <feature type="domain" description="Prephenate/arogenate dehydrogenase" evidence="8">
        <location>
            <begin position="1"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="9">
        <location>
            <begin position="294"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="362" mass="39729" checksum="41087880873F38BB" modified="2011-01-11" version="1">MKIAIFGVGLIGGSLALCFKGKPDITVVGHAHLPELMEPMLSRGVVDTATLSVEEAAKDADFIFLCVPVGLLEHYLELLSQLPLKAGCIITDVGSTKSAIAKKASEISLRNAYFIGGHPMAGSERSGVKAASALLFENAYYVLSPAEGVPEEAYSSLEHLLKYTGAHVVRVQPDMHDDIVGAISHLPHIIAAALVNQVRKHNDENPLYRTLAAGGFRDITRIASSDPVVWRDILLSNRDVLLGLLEEWNGQIERFTHLLRTQDGEGIADEFLTAGHFRSELPERRKGVIVSTFDLYIDVPDTPGIIGRIAMELGNHSINLSNMRIIESREDVPGIMRLSFRQEQDWERAKTLLDSMGYKVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4V9</accession>
    <name>E3E4V9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hup</name>
        <name evidence="5" type="ORF">PPSC2_14650</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57087.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599981.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02295"/>
    <dbReference type="EnsemblBacteria" id="ADO57087">
        <property type="protein sequence ID" value="ADO57087"/>
        <property type="gene ID" value="PPSC2_14650"/>
    </dbReference>
    <dbReference type="GeneID" id="66577051"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3125"/>
    <dbReference type="eggNOG" id="COG0776">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105066_3_1_9"/>
    <dbReference type="OrthoDB" id="1847472at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030261">
        <property type="term" value="P:chromosome condensation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020816">
        <property type="entry name" value="Histone-like_DNA-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01727">
        <property type="entry name" value="DNABINDINGHU"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00045">
        <property type="entry name" value="HISTONE_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0226">DNA condensation</keyword>
    <keyword evidence="3 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57087.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="9741" checksum="10E49621FF1E4384" modified="2015-05-27" version="2">MNKTDLINQVSESTELSKKDVTKAIDAVFEAIAGALQNGDKVQLVGFGNFEVRERSARKGRNPQTGEEIEIPASKIPAFKPGKALKDGIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E570</accession>
    <name>E3E570_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Terminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">xkdF3</name>
        <name evidence="3" type="ORF">PPSC2_16265</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372016.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3474"/>
    <dbReference type="EnsemblBacteria" id="ADO57430">
        <property type="protein sequence ID" value="ADO57430"/>
        <property type="gene ID" value="PPSC2_16265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3472"/>
    <dbReference type="eggNOG" id="COG0338">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058371_0_0_9"/>
    <dbReference type="OMA" id="KITHVSY"/>
    <dbReference type="OrthoDB" id="706429at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027924">
        <property type="entry name" value="XkdF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14550">
        <property type="entry name" value="Peptidase_S78_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S78_2" evidence="2">
        <location>
            <begin position="40"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="339"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="392"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="419" mass="45425" checksum="F88C22D34A99ED26" modified="2011-01-11" version="1">MARELKNVDITHISYVDKGANKKRFFLTKGEKKPDFEKQVRLITKTDDPKQLVYGVVYEPDAEDTHGDIMTADEIEKAVHGFMSNLAIAKGAVMDTQHDFDPGVGDVVECYVAPVDFEMGEETIKKGSWVLVTKASDDIWEKIQNEEVTGYSMAGTAETIEKQKEPAAKSNDEVTGFFNLMKSFFTGEKIAKGAVADKYNKGRPSREFWAAQDALNTVLFNWDSWNSGMETDPDAIREALQDFVDIAQTVLVQEDIMKAMGKPPEQITKAGKKISADNLKHIDDAIASLTELKTKTAPAEEAEPKEDEDLNTEDIAKAVQAAIAPIAKQVEVLSTQVTELKKQEGGDPGQPAGTEAPAEPQANALTDAITKALAPLTEQVQALATDVQVVKNSRGGSAQGGSGEDEIQKSGGVSFGGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>E3E594</accession>
    <name>E3E594_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57454.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3498"/>
    <dbReference type="EnsemblBacteria" id="ADO57454">
        <property type="protein sequence ID" value="ADO57454"/>
        <property type="gene ID" value="PPSC2_16375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3495"/>
    <dbReference type="HOGENOM" id="CLU_2618730_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57454.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="8918" checksum="474DD272223A6395" modified="2015-05-27" version="2">MRKTHNKSLRGGTDMKQGKRLTKKQKIGLLKARPGVTLDNWVSERETADGVVLLNKFSGKRWLLNKHYGALQPYKVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D0</accession>
    <name>E3E5D0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cell division protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yggT</name>
        <name evidence="3" type="ORF">PPSC2_16540</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YggT family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372075.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03875"/>
    <dbReference type="EnsemblBacteria" id="ADO57490">
        <property type="protein sequence ID" value="ADO57490"/>
        <property type="gene ID" value="PPSC2_16540"/>
    </dbReference>
    <dbReference type="GeneID" id="66576738"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3531"/>
    <dbReference type="eggNOG" id="COG0762">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_136788_4_3_9"/>
    <dbReference type="OMA" id="MSWLPGA"/>
    <dbReference type="OrthoDB" id="2069856at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003425">
        <property type="entry name" value="CCB3/YggT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33219">
        <property type="entry name" value="PTHR33219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02325">
        <property type="entry name" value="YGGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="9819" checksum="0BD5C2A2654E7C70" modified="2011-01-11" version="1">MIEVIYWLFQIYSYMIIAYVLLSWLPNARESVIGDLLARFVEPYLSPFRRFIPPIFGMIDISPIVALIALRFASYGLISLIGNFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D4</accession>
    <name>E3E5D4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">tetB</name>
        <name evidence="9" type="ORF">PPSC2_17270</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372234.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04620"/>
    <dbReference type="EnsemblBacteria" id="ADO57653">
        <property type="protein sequence ID" value="ADO57653"/>
        <property type="gene ID" value="PPSC2_17270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3691"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_3_0_9"/>
    <dbReference type="OMA" id="ESRAMNH"/>
    <dbReference type="OrthoDB" id="1108236at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="197"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="220"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="259"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="292"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="322"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="349"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="382"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="411"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="15"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="440" mass="47370" checksum="0980730F9A668751" modified="2011-01-11" version="1">MDTQSMALSGNERKLMGTLCLLIIFGNINMTMFNLSIPSISADFALTSSQVSWVMVGYSILMAIGAGTYGKLTESFSFRQLYVIGLILLAFGSMIGFFAASYLQVIIGRLLQAAGASSISPLSYAAVTLYFKPTVKGRVLGTLSATIAFASGFGPVFGGFVEQYFGWRALFIVSSLSLFVIPLIFKYVPDKKHDRGSFDFLGAVLFSAGLALVLLGVTNYWFMLIAGAAVLLWFGTHIQKKEHPFIDASFMKNAPYRRILGIGFLTFVCNTGLTFTLPVMMKNSFHLPTSKIGLLMLPGAVCAALLGSRIGGWTDRFGSSRVLVISQSLVVSGFILLGVSVHLPPWIDALLIITLMIGFNGVLTSSSNLVSTTLRSAELGVGMGIFTLAYLLGGAFGPALVGRLIDLKMPFFVVYFTISLLAILTYLFARKANPSGSYGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D6</accession>
    <name>E3E5D6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372236.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3700"/>
    <dbReference type="EnsemblBacteria" id="ADO57655">
        <property type="protein sequence ID" value="ADO57655"/>
        <property type="gene ID" value="PPSC2_17280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3693"/>
    <dbReference type="HOGENOM" id="CLU_193767_0_0_9"/>
    <dbReference type="OrthoDB" id="2045288at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7166" checksum="B8E510B35A8E1972" modified="2011-01-11" version="1">MDQKQLNSEVSRKASTETGTDTTSDKKKAYEQFIPTIASLKELDLSGIEPHLPPIYKKHYTKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5E4</accession>
    <name>E3E5E4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Thg1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372244.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04675"/>
    <dbReference type="EnsemblBacteria" id="ADO57663">
        <property type="protein sequence ID" value="ADO57663"/>
        <property type="gene ID" value="PPSC2_17335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3704"/>
    <dbReference type="eggNOG" id="COG4021">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044271_3_0_9"/>
    <dbReference type="OMA" id="RCRNDAV"/>
    <dbReference type="OrthoDB" id="1759890at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008193">
        <property type="term" value="F:tRNA guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024956">
        <property type="entry name" value="tRNAHis_GuaTrfase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007537">
        <property type="entry name" value="tRNAHis_GuaTrfase_Thg1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038469">
        <property type="entry name" value="tRNAHis_GuaTrfase_Thg1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12729">
        <property type="entry name" value="PTHR12729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04446">
        <property type="entry name" value="Thg1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thg1" evidence="1">
        <location>
            <begin position="8"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="28856" checksum="8C9F594974E02A78" modified="2011-01-11" version="1">MKKDDFGNRMKEYENAYRLSLPRRLPVIIRIDGAHFHTFTRGMTKPFDEKLIFALWETCKYLAYNIMGCKLVYHQSDEISLLLTNYDKLTTQSWFENNLQKMVSISASLATAKFNEEIQKVYPDKPLATFDARAWVLPHDEVANYFLWRQQDATKNSISMVAQAYFKHSELQGLNGSQLQDKLFVEKGLNWNDLPVWQKRGICITKQQYNKGEAVRSKWDVDHDTPIFSQNRDYINQYVYLNKDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5I0</accession>
    <name>E3E5I0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YdeI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydeI</name>
        <name evidence="2" type="ORF">PPSC2_17500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372280.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E5I0"/>
    <dbReference type="STRING" id="1406.LK13_04840"/>
    <dbReference type="EnsemblBacteria" id="ADO57699">
        <property type="protein sequence ID" value="ADO57699"/>
        <property type="gene ID" value="PPSC2_17500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3739"/>
    <dbReference type="eggNOG" id="COG4430">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116201_0_0_9"/>
    <dbReference type="OMA" id="TEELKWG"/>
    <dbReference type="OrthoDB" id="1278667at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014922">
        <property type="entry name" value="DUF1801"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016786">
        <property type="entry name" value="YdeI_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08818">
        <property type="entry name" value="DUF1801"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021308">
        <property type="entry name" value="UCP021308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1801" evidence="1">
        <location>
            <begin position="21"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="199" mass="22836" checksum="63CDF3C482D270CC" modified="2011-01-11" version="1">MTSREEINPKVDAYLDKVKKWKAEMEKLRAIMLDCQLTEELKWGKPCYMFQNSNIAIIQGFKEHCALMFFKGALLKDPNGILIKPGEDTQAGRQIRFTNVEGIVEMEAILKDYINEAIEVEKTGLKVDFKKNTELIFPEEFQAKLDEDPALKTAFAALTPGRQRAYVMHFSAPKQSKTRESRIEKCMQDILNGKGLNDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N4</accession>
    <name>E3E5N4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tctD</name>
        <name evidence="5" type="ORF">PPSC2_18470</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372490.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3960"/>
    <dbReference type="EnsemblBacteria" id="ADO57911">
        <property type="protein sequence ID" value="ADO57911"/>
        <property type="gene ID" value="PPSC2_18470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3959"/>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4977">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_1_9"/>
    <dbReference type="OMA" id="GYQTAKY"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="7"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="159"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="30580" checksum="657A67D50E89904F" modified="2011-01-11" version="1">MSFSSKTIVIVDDEQRTRQGIHQTLEQWAAGKYRIMTSGNGLEALHMLQAEKVHLLITDVRLPEFSGLDLIRSLERDSHRPAIIVISGYAEFDYVQQALRLGAVNYLLKPIDKQELLNAVNEALQLEEERQRYKKLDKLADPVLLELDLQATTLSDPVRRAFTFMAEHLHEPITMAQTAAHSHLNASYFSVLFKEQSGLSFSEYLHRIRIQRAKELLLHTQLTIAQIGERSGYRTDKYFIKVFKATEGVSPSRYRQQMRKGPENID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y3</accession>
    <name>E3E5Y3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Iron ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ycdO</name>
        <name evidence="6" type="ORF">PPSC2_19890</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EfeM/EfeO family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372774.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07110"/>
    <dbReference type="EnsemblBacteria" id="ADO58202">
        <property type="protein sequence ID" value="ADO58202"/>
        <property type="gene ID" value="PPSC2_19890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4239"/>
    <dbReference type="eggNOG" id="COG2822">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050342_0_1_9"/>
    <dbReference type="OMA" id="WTGWHRL"/>
    <dbReference type="OrthoDB" id="1430947at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd14656">
        <property type="entry name" value="Imelysin-like_EfeO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018976">
        <property type="entry name" value="Imelysin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034981">
        <property type="entry name" value="Imelysin-like_EfeO/Algp7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038352">
        <property type="entry name" value="Imelysin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09375">
        <property type="entry name" value="Peptidase_M75"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168015" evidence="4">
        <location>
            <begin position="27"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M75" evidence="5">
        <location>
            <begin position="57"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="27"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF09375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="32017" checksum="87BD23F4C2F24949" modified="2011-01-11" version="1">MKLRYAVPAGVLVSSILFAGCGQAGTADQQPAATPKDTGATTQTTTPAATAPNFDQAVAAYRTYATEQCDTFVKKTEEFTNAVKAGELDKAKALYAPARMYYERIEPIAEALGDLDPNIDARDGDVETADWRGFHRIEKTLWEENTTKGLDEFSDRLLSDAKLLRAKVETVNIDASLMVTGAVELLNEVSTSKVTGEEERYSHTDLYDFAANVEGAQKIYDILKTDLNQKDAALEKQIGERFTALQQELAPFKDGEGYVSYTKLKPEEIKKLSQNLDALAEPLSQMGKLLGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6A3</accession>
    <name>E3E6A3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine protein phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pppL</name>
        <name evidence="2" type="ORF">PPSC2_18740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372550.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05955"/>
    <dbReference type="EnsemblBacteria" id="ADO57972">
        <property type="protein sequence ID" value="ADO57972"/>
        <property type="gene ID" value="PPSC2_18740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4016"/>
    <dbReference type="eggNOG" id="COG0631">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034545_1_1_9"/>
    <dbReference type="OMA" id="NEDHSLA"/>
    <dbReference type="OrthoDB" id="1835483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="1">
        <location>
            <begin position="37"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="29572" checksum="1EE73C08890536AF" modified="2011-01-11" version="1">MQPYFVVCGAAVLFAVLLIIRIRLTRSSGSRTVSGIEIGNGQTIGSRSEQDDYFSSMTTPVGTLAVVADGISGLANGRMSSTLAVTTFTKAFAKLEDTTNLNGYFAEAATQSNRGILQNLNGQGGGTTLAAVIVCGYQLYYGAVGDSLITIYRNGHFQTVNSKHTAETLLEERVLAGQMTSEEAKTSPVRNQLVNYLGYEGFESMELGNAPIRLYSGDYVLLCSDGIQEALTEIEQEEIMRKGGTPQEMADAMIDTINDKGFKSQDNATVLILAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6C0</accession>
    <name>E3E6C0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pullulanase</fullName>
            <ecNumber evidence="3">3.2.1.41</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Alpha-dextrin endo-1,6-alpha-glucosidase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Pullulan 6-glucanohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pulA</name>
        <name evidence="7" type="ORF">PPSC2_18815</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>Hydrolysis of (1-&gt;6)-alpha-D-glucosidic linkages in pullulan, amylopectin and glycogen, and in the alpha- and beta-limit dextrins of amylopectin and glycogen.</text>
            <dbReference type="EC" id="3.2.1.41"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 13 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.41" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372566.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06025"/>
    <dbReference type="CAZy" id="CBM41">
        <property type="family name" value="Carbohydrate-Binding Module Family 41"/>
    </dbReference>
    <dbReference type="CAZy" id="CBM48">
        <property type="family name" value="Carbohydrate-Binding Module Family 48"/>
    </dbReference>
    <dbReference type="CAZy" id="GH13">
        <property type="family name" value="Glycoside Hydrolase Family 13"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57989">
        <property type="protein sequence ID" value="ADO57989"/>
        <property type="gene ID" value="PPSC2_18815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4033"/>
    <dbReference type="eggNOG" id="COG1523">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004744_4_0_9"/>
    <dbReference type="OMA" id="HAFVNDQ"/>
    <dbReference type="OrthoDB" id="99080at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051060">
        <property type="term" value="F:pullulanase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10315">
        <property type="entry name" value="CBM41_pullulanase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013784">
        <property type="entry name" value="Carb-bd-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005323">
        <property type="entry name" value="CBM41_pullulanase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004193">
        <property type="entry name" value="Glyco_hydro_13_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011840">
        <property type="entry name" value="PulA_typeI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045041">
        <property type="entry name" value="Pullulanase_PULA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43631">
        <property type="entry name" value="PTHR43631"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02922">
        <property type="entry name" value="CBM_48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03714">
        <property type="entry name" value="PUD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49452">
        <property type="entry name" value="SSF49452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02104">
        <property type="entry name" value="pulA_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="6">
        <location>
            <begin position="182"/>
            <end position="584"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00031076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="843" mass="95603" checksum="8D994AC7D121A544" modified="2011-01-11" version="1">MSDFNQLKGLEHTAYPIYEGYDLGLTYTPAGSKFKVWAPTAQQVHIALYSDAGVYDQEGIVQEHGGGQEFLMSRDDQGVWSIELEGDWNRYYYMYRLEWVDHTIHYAADPYARAVSANGQRTAIIDLDQTNPDGWEQDEGPVLERATDAIIYELHVRDFSMDPHFNTGIKDLSAAQGRFAAFTYTGLTDSEGNRIGLDHLLELGITHVHLLPVADFHTVNDFSELGTEYNWGYDPQHYNVPEGSYSSNPADPEARIRELKLLVQSLHAAGIGVIMDVVYNHTYSVEKGPFEPVVPGYYYRTDEQGKLTNGSGVGNEMATERPMVRKYIKDSLRYWAEEYHIDGFRFDLMALIDTPTVEQLTRELRSEIRPDLLIYGEPWTGGESPQPLLTLKGTQRDKGFAVFNDNYRSAIKGDSDGTGSGFATGAENQEERVLQGAFGAIYDFTAQPSETVNYVTAHDNLNLWDKILTVRHALENCRFPQWEQGNPKDGRTAEQAVAEADPYQEMDESNLLENETVRKSLLANGMVLTSQGIPFIHAGDELLRSKYGDHNSYRSSDVVNAIRWNNKARFRPVFDYYQGLIALRRSHPAFRMDQRELVEQHMEVLQSSGHVVAFALRHHANGDAWNHIVVIYNGSDTEQTILLPAESDRWHVVVDAHGAGNETRYEVVGHRVTVSRWSMMVLYDQDGPPQASFLTEHDHQANEQVDNKTKGLDEGTNQEIAGTAMTDAQLGNDREVIPFRTIELIYERADRQYSGWNVWVWGTGYRDGHVEFQDLDDGRAVARIRVAPDVQRIGYIVRLNHWDAKDVEADRYIVVDLTRSVMQVLIHSGREEYLLLVNDNRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6F2</accession>
    <name>E3E6F2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Xylanase deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cda2</name>
        <name evidence="4" type="ORF">PPSC2_18960</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372598.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06170"/>
    <dbReference type="EnsemblBacteria" id="ADO58021">
        <property type="protein sequence ID" value="ADO58021"/>
        <property type="gene ID" value="PPSC2_18960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4063"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046845_0_0_9"/>
    <dbReference type="OMA" id="PPWGIVN"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0858">Xylan degradation</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="3">
        <location>
            <begin position="38"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="459"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="461"/>
            <end position="482"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="482" mass="55541" checksum="909DCAAAE44F936B" modified="2011-01-11" version="1">MQTLLLWMFYISTFYAFIPALVSRIFGFRVFRRGKSDQEYALTFDDGPDPVYTPQLLDLLKRFDAKATFFVVGMNAEKHPELLKRMHDEGHLIGIHNYVHKSNWLMRPVTVRRQITQTESVIRRVTGEGTTFYRPPWGIVNFFDISKNNGRRIVLWSSMFGDWKASIGAKQLAERMLKKLRGGEVMLLHDCGTTLGADAEAPQNMLIALEKLLRVAQKQQLRSVRVDTLFCRQSGNQSTVSSLSSTDWIKRTMVFGWLQYERLFHALFRLRPVSKDNTIFYYRRRIYHGPNINMENGRWLEKGDPIIELHFDNKMLFQLGATAKSLVHLAIQLIRVVKRQLPDLTQRVVHDSGMKGVKAIYAVSMIHRGPEKLGFQVQELPQGLFKHVSTVYLKLLFRIIHPSGSEQLSEKKEVMVPKLIVMPIDTLFERFQPGDSHRSDQVFEPTDQRDVVHTLNSEMTEEGEPMHTSIRASQTADTGSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6F4</accession>
    <name>E3E6F4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Penicillin-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pbp</name>
        <name evidence="3" type="ORF">PPSC2_18970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58023.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06180"/>
    <dbReference type="EnsemblBacteria" id="ADO58023">
        <property type="protein sequence ID" value="ADO58023"/>
        <property type="gene ID" value="PPSC2_18970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4065"/>
    <dbReference type="eggNOG" id="COG0768">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009289_6_3_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036138">
        <property type="entry name" value="PBP_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56519">
        <property type="entry name" value="SSF56519"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="2">
        <location>
            <begin position="266"/>
            <end position="585"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58023.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="591" mass="64611" checksum="0A289D2EB778846F" modified="2015-05-27" version="2">MNVSRRHNSFNRQRRIAYIALGIMVLLLILCFRLAWIQGTAGIHLSLYGGHSLKEMSVRQRQEGIAIDTGRGQFTDRHGQPLTGGVVWTPVLFPDVDGQAALHGQELAKLLHTSKGQLLTRWRELQSPLIWRDGRGEPIQIHPNEAGRLLKLAPSLIELVPYAQRYRDMPNGRQWLGFLYERGERASELPMGAAGLERTLEPLLSGVGETFVSRSVDAQRRPLTHVPLRVSAPSNSHYPLQVQTTIDLPLQEQIEKLTESNHLAEGAVVVLDAGNADVMAMVSRPFYNPIHVDPQQKTDWSNRALKAVTPGSIFKLVTAAAALESGVVQPQEQFHCHGAYGKYGLSCWKEKGHGTLNLEEGLAVSCNSVFAHLGERLNAEQIQSAASALGLSRTVGWQDRNLAGLPQFRPLDHEEKGAVFGSHTNASDPGVRVQTAIGQRDVLVTPLQAANLIVTLLHDGQVHAPRIVKRISYADGSTLLELPAHAAPLPQGSRSIRTSTAHTLREAMEQVVTHGTGASLRNKTWKLAGKSGTAQALKNGHPINHQWFIGYGPIERPRYAVAVLVQNASAHAANQATALFGQVMDLLAQSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G9</accession>
    <name>E3E6G9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rrf2 family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yrzC</name>
        <name evidence="1" type="ORF">PPSC2_19045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372613.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06255"/>
    <dbReference type="EnsemblBacteria" id="ADO58038">
        <property type="protein sequence ID" value="ADO58038"/>
        <property type="gene ID" value="PPSC2_19045"/>
    </dbReference>
    <dbReference type="GeneID" id="66576257"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4081"/>
    <dbReference type="eggNOG" id="COG1959">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107144_0_1_9"/>
    <dbReference type="OMA" id="YGLTIMM"/>
    <dbReference type="OrthoDB" id="1794390at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030489">
        <property type="entry name" value="TR_Rrf2-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00738">
        <property type="entry name" value="rrf2_super"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01332">
        <property type="entry name" value="HTH_RRF2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="15579" checksum="5EEE12ED0BF18CE1" modified="2011-01-11" version="1">MKISTKGRYGLTIMMELAARFGEGPTSLKSIAEKNQLSEHYLEQLIAPLRNAGLVKSIRGAYGGYILANEPSGVTAGDIIRVLEGPISPVDFTEEDDPAKRQLWLRIRDSIAEVLDSTTLKDLITYQEHDELDNYMFYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H9</accession>
    <name>E3E6H9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">uvrD</name>
        <name evidence="8" type="ORF">PPSC2_19095</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372623.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06295"/>
    <dbReference type="EnsemblBacteria" id="ADO58048">
        <property type="protein sequence ID" value="ADO58048"/>
        <property type="gene ID" value="PPSC2_19095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4091"/>
    <dbReference type="eggNOG" id="COG3973">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010312_4_0_9"/>
    <dbReference type="OMA" id="ASRTYEF"/>
    <dbReference type="OrthoDB" id="114076at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000212">
        <property type="entry name" value="DNA_helicase_UvrD/REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014016">
        <property type="entry name" value="UvrD-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027785">
        <property type="entry name" value="UvrD-like_helicase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11070">
        <property type="entry name" value="PTHR11070"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13538">
        <property type="entry name" value="UvrD_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51198">
        <property type="entry name" value="UVRD_HELICASE_ATP_BIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 8" id="KW-0347">Helicase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD-like helicase ATP-binding" evidence="7">
        <location>
            <begin position="186"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="13"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="207"/>
            <end position="214"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="713" mass="80856" checksum="AD4D34D0301B419B" modified="2011-01-11" version="1">MENKFQSAYQEEQHRLSLAMEEIDRRLERLRNTPVYTGHDFTEQVLESAREEKRQALAKSSQEPYFGRMDFDERGRGQRKPLYIGKIGVEREETSAYPLVIDWRAPIASLFYSFTGGEETASYEAPEGTVEGLVYLKRNVVIRKRILERVADTYNRESDEPAVSDEFLVYRLGENKDNRLRDIVSTIQAEQDQIIRAAKNTALVIQGVAGSGKTTVALHRLAFLLYQYKDQVSADKMVIFAPNHMFLDYISDVLPELGVGNIQQSTFADWALGLLGLDLPLADPTETLSYWFESGGLRTESMDEAPGRFKGSVHFMKLLQDFVERLEPISVPEGDFSPWDGAVLPRTEILNWFNEEYKPYPLAKRKERVLARVHRWIEMELKKSPSAAALKERKKKAGSREKAYAKKWPQYDALTLYKQLFQAAKGLPAEAAAEMKASLPASIFKATQSDLRSQIIREEDLTALVYLHVLIHEVESSQRFDHVVIDEAQDFSPFHIALLDLFVKGHSFTILGDLSQGIHEYRGVHAWEEMSSLFAPEQTGYFALTRSYRSTLEIIEFANTILEQGVRGGITAVPVFRSGDPVRTVSYDSSVREESLLTALKELSSKEYRTVSVLTRTLKEAVELHEVFTSAGLDVHLIDGGKKQYEGGLSVLPVYLSKGLEFDAVIVADADQDHYGERTWDAKLLYVGCTRALHELWLLHDGPLPSYVQAQTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6P0</accession>
    <name>E3E6P0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Succinate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">sdhC</name>
        <name evidence="8" type="ORF">PPSC2_20325</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372872.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07580"/>
    <dbReference type="EnsemblBacteria" id="ADO58300">
        <property type="protein sequence ID" value="ADO58300"/>
        <property type="gene ID" value="PPSC2_20325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4333"/>
    <dbReference type="eggNOG" id="COG2009">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078991_0_0_9"/>
    <dbReference type="OMA" id="YDMMANI"/>
    <dbReference type="OrthoDB" id="750409at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03497">
        <property type="entry name" value="SQR_TypeB_1_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011138">
        <property type="entry name" value="Cytochrome_b-558"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034804">
        <property type="entry name" value="SQR/QFR_C/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016002">
        <property type="entry name" value="Succ_DH_cyt_b558_Firmicute"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000701">
        <property type="entry name" value="SuccDH_FuR_B_TM-su"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01127">
        <property type="entry name" value="Sdh_cyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000170">
        <property type="entry name" value="Succ_dh_cyt_b558"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81343">
        <property type="entry name" value="SSF81343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02046">
        <property type="entry name" value="sdhC_b558_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0349">Heme</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="95"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="25251" checksum="E57A8953FA2C2849" modified="2011-01-11" version="1">MRGFYSRKLHSLLGVIPLALFFVEHLVTNFTAVEGGKEGFNRSVAFLNGLPLVIVLETLFIYLPLLFHGIYGLYIAYQADPNVKRFGYSRNWRFLFQRISGVITFVFIIWHVYDTRFQVALGNVTHEELGGVMHGIVTNPVYFILYLISVVSASFHFANGLWAFMVSWGITVGPRAQKVSSYICMTLFVVVSIGFVASLLAFRSAEFQETATALVHCSAFKQIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6R2</accession>
    <name>E3E6R2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yyaC1</name>
        <name evidence="2" type="ORF">PPSC2_21175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373033.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08405"/>
    <dbReference type="EnsemblBacteria" id="ADO58464">
        <property type="protein sequence ID" value="ADO58464"/>
        <property type="gene ID" value="PPSC2_21175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4501"/>
    <dbReference type="eggNOG" id="ENOG5032WEB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_104063_2_0_9"/>
    <dbReference type="OMA" id="KPYWTLQ"/>
    <dbReference type="OrthoDB" id="1455540at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009665">
        <property type="entry name" value="DUF1256"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023430">
        <property type="entry name" value="Pept_HybD-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06866">
        <property type="entry name" value="DUF1256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53163">
        <property type="entry name" value="SSF53163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02841">
        <property type="entry name" value="spore_YyaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="21536" checksum="131136AEDF78830B" modified="2011-01-11" version="1">MSLYNRASTSGRSPLEPTNVEKTDRDGLAPFFREIQHQHAMDKLTFVCIGTDRSSGDSLGPLVGTMLKEQGFPNVIGTMTEPCDADHLVSYLERIPQDHHVIAIDACLGQHGSTGMFLVAREPLTPARSVGLSLPSVGHYSVAAIVNERSAKPYWTLQMTSLHLVMTMAAYIADAAACEFGLKTASQDFPAGYRFRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6S2</accession>
    <name>E3E6S2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Anti-sigma factor antagonist</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_21225</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the anti-sigma-factor antagonist family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373043.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08455"/>
    <dbReference type="EnsemblBacteria" id="ADO58474">
        <property type="protein sequence ID" value="ADO58474"/>
        <property type="gene ID" value="PPSC2_21225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4511"/>
    <dbReference type="eggNOG" id="COG1366">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_115403_9_3_9"/>
    <dbReference type="OMA" id="MNLAINI"/>
    <dbReference type="OrthoDB" id="1864829at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043856">
        <property type="term" value="F:anti-sigma factor antagonist activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003658">
        <property type="entry name" value="Anti-sigma_ant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13466">
        <property type="entry name" value="STAS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00377">
        <property type="entry name" value="ant_ant_sig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="STAS" evidence="3">
        <location>
            <begin position="9"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12461" checksum="F5B6C59DED4C3BB1" modified="2011-01-11" version="1">MNTNKNEKFNAITETADGVNTVYLSGELDLSVAPDFRLVMEPLVGESSQDLIVNLRDLKYIDSTGIGILLSILKARHGMESRFTVQEVPPQIQKLFDMTGIAKFFAPQENSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W4</accession>
    <name>E3E6W4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">lanT</name>
        <name evidence="12" type="ORF">PPSC2_21415</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373084.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4567"/>
    <dbReference type="MEROPS" id="C39.004"/>
    <dbReference type="EnsemblBacteria" id="ADO58516">
        <property type="protein sequence ID" value="ADO58516"/>
        <property type="gene ID" value="PPSC2_21415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4553"/>
    <dbReference type="eggNOG" id="COG2274">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="CACVVIA"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008234">
        <property type="term" value="F:cysteine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005074">
        <property type="entry name" value="Peptidase_C39"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03412">
        <property type="entry name" value="Peptidase_C39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50990">
        <property type="entry name" value="PEPTIDASE_C39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="1 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="147"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="185"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="263"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="287"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="365"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase C39" evidence="11">
        <location>
            <begin position="2"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="151"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="462"/>
            <end position="695"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="496"/>
            <end position="503"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="706" mass="80204" checksum="5C4A819A262778A6" modified="2011-01-11" version="1">MEHSECGLASLAMILGFYGHNISLTELRNQVGAVRAGISMQQLQEIGSTYHLKSRGYRATASQLNELIAPLILLWDNQHFVVLEKIKKKKVIILDPAFGRLILPLKEFTEKYSGFALSLIPLKDFRSKRKRPKWMFYIKLAFKSRKLLISVFLVSILLQGLGVLIPKITQFSVDNLLESKNNSFLVPLGWAIFTIFLFSQLFQFLRGYMIAKLQSQMDTSMMTQFIAKLFKLPFEFFENRKGGELVFRANSNVTIRRVLSNRVITIFIDGLLLITYAALMINLLWQIGLLVTIIGFLLLLITVLSSFTTHRLSRKETSSQAEMHGFLSEHIHGITDIKVLGFESRVFKKWEELFKKQLTNTEKRVIWNASLDSMTVSIQFIFPLLILWIGFHYVLEGWITFGGLLGLQTLSTAFMVPLVSLGSTLSELVTVGTYIQRIQDVIENVEEPSGNHKPNHTFKGYIKFKDVSFNYHRFGKYVLKNINLEIFPGEKVAIVGASGSGKSTLAKLILGLYKASIGEVSVDNIPLDQWHLREFRQKIGVILQETKLFNVSILDNIAMDNGDCTIDMVVRAAKQADIHRFIMSLPLGYQTVVSENGLNFSGGQRQRILLARAFLAEPQILLLDEATSSLDSVSEQLITDFLQERHCTQIIIAHRLSTVQRADRIIVLDQGEIIEQGNHQELIGLKGKYFDLYNLKKTDFQVEPVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E707</accession>
    <name>E3E707_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">50S ribosomal protein L24</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">rplX</name>
        <name evidence="6" type="ORF">PPSC2_22380</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="3">One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 4">Belongs to the universal ribosomal protein uL24 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58709.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025365930.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09845"/>
    <dbReference type="EnsemblBacteria" id="ADO58709">
        <property type="protein sequence ID" value="ADO58709"/>
        <property type="gene ID" value="PPSC2_22380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4745"/>
    <dbReference type="eggNOG" id="COG0198">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_093315_2_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06089">
        <property type="entry name" value="KOW_RPL26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01326_B">
        <property type="entry name" value="Ribosomal_L24_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041988">
        <property type="entry name" value="KOW_RPL26/RPL24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003256">
        <property type="entry name" value="Ribosomal_L24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005825">
        <property type="entry name" value="Ribosomal_L24/26_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12903">
        <property type="entry name" value="PTHR12903"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00467">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17136">
        <property type="entry name" value="ribosomal_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01079">
        <property type="entry name" value="rplX_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01108">
        <property type="entry name" value="RIBOSOMAL_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 4 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="KOW" evidence="5">
        <location>
            <begin position="2"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58709.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="11442" checksum="F38E5893C1C8EA30" modified="2015-05-27" version="2">MHVKKDDTVLVITGKDKGKKGRVIAAYPRQNRVLVEGVNMIKKHQKPNQLNPQGGIIEKEAPIHVSNVMHIDPKSGKVTRVGYKVLDNGKKVRIAKRSGEVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E771</accession>
    <name>E3E771_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Cardiolipin synthase</fullName>
            <shortName evidence="12">CL synthase</shortName>
            <ecNumber evidence="12">2.7.8.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">cls3</name>
        <name evidence="14" type="ORF">PPSC2_23395</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>2 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) = a cardiolipin + glycerol</text>
            <dbReference type="Rhea" id="RHEA:31451"/>
            <dbReference type="ChEBI" id="CHEBI:17754"/>
            <dbReference type="ChEBI" id="CHEBI:62237"/>
            <dbReference type="ChEBI" id="CHEBI:64716"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
            <topology evidence="12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the phospholipase D family. Cardiolipin synthase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.-" evidence="12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373462.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10885"/>
    <dbReference type="EnsemblBacteria" id="ADO58926">
        <property type="protein sequence ID" value="ADO58926"/>
        <property type="gene ID" value="PPSC2_23395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4953"/>
    <dbReference type="eggNOG" id="COG1502">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038053_1_2_9"/>
    <dbReference type="OMA" id="HASRSYF"/>
    <dbReference type="OrthoDB" id="1881748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008808">
        <property type="term" value="F:cardiolipin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032049">
        <property type="term" value="P:cardiolipin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01916">
        <property type="entry name" value="Cardiolipin_synth_Cls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030874">
        <property type="entry name" value="Cardiolipin_synth_Firmi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022924">
        <property type="entry name" value="Cardiolipin_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027379">
        <property type="entry name" value="CLS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025202">
        <property type="entry name" value="PLD-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001736">
        <property type="entry name" value="PLipase_D/transphosphatidylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13091">
        <property type="entry name" value="PLDc_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13396">
        <property type="entry name" value="PLDc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00155">
        <property type="entry name" value="PLDc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04265">
        <property type="entry name" value="bac_cardiolipin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50035">
        <property type="entry name" value="PLD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 12" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="8 12" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 12" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="11 12" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="5"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="32"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="13">
        <location>
            <begin position="239"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="13">
        <location>
            <begin position="416"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="421"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="423"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO58926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="503" mass="57709" checksum="4FAC0D1788F23065" modified="2011-01-11" version="1">MRRSLLAVLIAAMVFIIYYFGLFNYIGKNEGTVISIFSTLTVISISLIIFTENRNPSTTMSWILLLALLPVVGLPLYFLFGQNVFKRRKYDKKALRDQQAYERIEKDALRVKRDLTCFTDEQQQLMRLARRLARSPIYFATETQILNNGDETFSTLLEELRKAQHHIHMEYYIFRSDDIGTSIQKILIEKAKAGVKVRFMYDAVGSIQLSKAFLKEMKDAGVEVVAYGGARILFFSSRVNYRNHRKIVVIDGNIGLIGGLNVGDEYLSRNKAYGFWRDTHMIVKGEAVRTLQLIFLQDWLHMTGESVLDSEYLSPDIEPITDGGVQIIASGPDNERRVLKNLFFSMITSARKSVWIATPYFIPDEDILTALRMAALSGLDVRILFPAKPDKWLPFLASHSYFQSLLEVGVKVYEYEKGFLHSKLLIIDGEVATIGTANMDMRSFHLNFEVNALLIQTHSVQQMVTDYERDLQNASLIVREEFMKKRLFKRLMESLARLLSPLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Q5</accession>
    <name>E3E7Q5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thiamine biosynthesis protein ThiF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">moeB1</name>
        <name evidence="2" type="ORF">PPSC2_13575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371463.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01260"/>
    <dbReference type="EnsemblBacteria" id="ADO56860">
        <property type="protein sequence ID" value="ADO56860"/>
        <property type="gene ID" value="PPSC2_13575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2889"/>
    <dbReference type="eggNOG" id="COG0476">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013325_10_1_9"/>
    <dbReference type="OMA" id="WYGHVAT"/>
    <dbReference type="OrthoDB" id="1408716at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008641">
        <property type="term" value="F:ubiquitin-like modifier activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045886">
        <property type="entry name" value="ThiF/MoeB/HesA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000594">
        <property type="entry name" value="ThiF_NAD_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035985">
        <property type="entry name" value="Ubiquitin-activating_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953">
        <property type="entry name" value="PTHR10953"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00899">
        <property type="entry name" value="ThiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69572">
        <property type="entry name" value="SSF69572"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ThiF" evidence="1">
        <location>
            <begin position="17"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="352" mass="38824" checksum="D806C7C07CA77878" modified="2011-01-11" version="1">MRITKKSAAEPPQSDRYSRQERFAPFGPAGQRRLASSHVLIIGVGALGTGIAETLVRGGVGTVSLVDRDYVEWSNLQRQQLFQESDAVQRCPKAVAAQRRLKDINSETIVHAHVLDVGIEELEELIQGVDLMMDATDNFDTRLLMNDMALKHRIPWIYGGCVGSYGVTYTILPGQTPCLHCLMGTVPLGGETCDTAGIIPQAVQMVTANQTTEAFKLLGGYPENLRGKLLSFDLWKNEYVAIAVDRLKKANCPSCGSQPTYPYLSASYRQKTDVLCGRDTVQIRPANRTHLNLAEVANRFTALGEGNVEWNSYLVSFSVGEHRLVVFADGRALIHGTKDLAKARSLYHRYLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7S2</accession>
    <name>E3E7S2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yqjA</name>
        <name evidence="3" type="ORF">PPSC2_14005</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371555.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01660"/>
    <dbReference type="EnsemblBacteria" id="ADO56955">
        <property type="protein sequence ID" value="ADO56955"/>
        <property type="gene ID" value="PPSC2_14005"/>
    </dbReference>
    <dbReference type="GeneID" id="66577178"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2991"/>
    <dbReference type="eggNOG" id="COG4129">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067525_0_0_9"/>
    <dbReference type="OMA" id="YYHYFKM"/>
    <dbReference type="OrthoDB" id="1308361at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010343">
        <property type="entry name" value="ArAE_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021062">
        <property type="entry name" value="ArAE_1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038323">
        <property type="entry name" value="ArAE_1_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06081">
        <property type="entry name" value="ArAE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11728">
        <property type="entry name" value="ArAE_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="ArAE_1_C" evidence="2">
        <location>
            <begin position="144"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="35591" checksum="C6449043185518EB" modified="2011-01-11" version="1">MGFRTIKTAIAALMAVLIAEGVGIHGATSAGLLAILGVDVTRKRSLRTISARFFASVVGLLFACVLFVVFGFHDWVLALYILTAFPVIVRVGFKEGIVTGSVVVFRVFSGGVIDMEVLLTQLALLVIGLGSAMVVNLAYMPRSDNTMQQIRQEVDRTFSVIFRNMANTLRSPAYIWDGKEVIEADSVITKGVTEAGRSLENQMLRPQEGWNVYFYMRKEQLDSIQNMMQLIAQMYQHMPQAKLLAELFDQLSNDVLAGHYTGQTEKLLEQVREEFKAMELPATREEFEIRSALLQLTHELHQYLKIAKKDKAPTPVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T3</accession>
    <name>E3E7T3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metalloenzyme domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371566.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01715"/>
    <dbReference type="EnsemblBacteria" id="ADO56966">
        <property type="protein sequence ID" value="ADO56966"/>
        <property type="gene ID" value="PPSC2_14060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3002"/>
    <dbReference type="eggNOG" id="COG3119">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_075524_0_0_9"/>
    <dbReference type="OMA" id="VWTVPYA"/>
    <dbReference type="OrthoDB" id="1067869at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="1">
        <location>
            <begin position="103"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="29455" checksum="12E7A0C89024DDEA" modified="2011-01-11" version="1">MTDMNQIVGSHDIVMITLDTLRYDVAKLEEENCSNLCGSGSWEKRHTPGSFTYAAHHAFFGGFLPTPANTDKASHIRLFHTKDTGLRTHPHTWLFDAPDIVSGLENEGYRTICIGGVIFFTKKNKLAKVLPGYFQESYWRMNFGVTNPRSTEHQVNHALKLLEKADPAQRLFLFLNVSAIHGPNHYFVKGSSKDSVESQRAALRYVDGELGRLFDALRKRGKTFCMAFSDHGTAYGEDGYEGHRLAHEVVWNVPYRDFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T9</accession>
    <name>E3E7T9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371572.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01745"/>
    <dbReference type="EnsemblBacteria" id="ADO56972">
        <property type="protein sequence ID" value="ADO56972"/>
        <property type="gene ID" value="PPSC2_14090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3008"/>
    <dbReference type="eggNOG" id="ENOG5033MTQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_093827_0_0_9"/>
    <dbReference type="OMA" id="MHEKISI"/>
    <dbReference type="OrthoDB" id="1444476at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="237"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="245"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="31634" checksum="E7F71832BCEAC6C7" modified="2011-01-11" version="1">MRNSDSLSGFPLLHDYQLEEMWRTPQPIRQSQRKRGREGWNWRQRVQYAIGHALNEYFGMEVEVRREVPVQYVLEKWWPKQSNSFESLFHYWDVKNKVSGELSKICALNNDLLVPVMLYEQFCTAVPELEVDISLIIQAAWQQSEQADSLLIQKYMVDYNPNVISTFQHLTNVFCYYAFGALPQLIEVYCLLEGKKVRFLPGSASLQQSLDYVRLLKDSREDMHGIAERCRCRGCMGQQGSQQNRANKDKKEEREAKNCRDRSFGPTPFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7X2</accession>
    <name>E3E7X2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Iron hydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hydA</name>
        <name evidence="3" type="ORF">PPSC2_14245</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01900"/>
    <dbReference type="EnsemblBacteria" id="ADO57005">
        <property type="protein sequence ID" value="ADO57005"/>
        <property type="gene ID" value="PPSC2_14245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3041"/>
    <dbReference type="eggNOG" id="COG4624">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018240_2_0_9"/>
    <dbReference type="OMA" id="CMRCIQV"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008901">
        <property type="term" value="F:ferredoxin hydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.260.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009016">
        <property type="entry name" value="Fe_hydrogenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004108">
        <property type="entry name" value="Fe_hydrogenase_lsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003149">
        <property type="entry name" value="Fe_hydrogenase_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036991">
        <property type="entry name" value="Fe_hydrogenase_ssu_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013352">
        <property type="entry name" value="Fe_hydrogenase_subset"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02906">
        <property type="entry name" value="Fe_hyd_lg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02256">
        <property type="entry name" value="Fe_hyd_SSU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00902">
        <property type="entry name" value="Fe_hyd_SSU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53920">
        <property type="entry name" value="SSF53920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02512">
        <property type="entry name" value="FeFe_hydrog_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="421"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="446" mass="49578" checksum="D2551F780797E242" modified="2011-01-11" version="1">MNADRCVICGQCVQICSVYATDWADSSPQAAAIKRQERIRERDMPADTGEPLFAAYYSYSLNKVADMMKKPGQLRIVQCAPAIRVSLAEEFGMPFGTLTPGKMAAALRRLGFDRVYDTNFGADVTIMEEGTELIRRVTEGGPLPMFTSCCPAWVRFAEIEYPDLLDHLSSCKSPMQMVGALVKTYGAQLDEVEPANIYSVAIMPCTCKQFECDRPEMESDGYRDVDEVLTTRELAYWIKQQGIDFMNLPDEEFDAPLGQYSGAGTIFGVTGGVMEAAIRTGYELLTNEKLPKLQLDFVRGEEGIRVAEVQVGELQLKVAVVAGLQHAYQLLDRVQAGECDYHFIEVMGCPAGCISGGGQPKLMLEKQKIEAYRARKSSIYGHDAASQVRKSHENPFIIKLYDEFLGEPLGHVSHHLLHTTFQKRGPGRQSRSSDMSVKGHIDYPIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8A8</accession>
    <name>E3E8A8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CoA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yneT</name>
        <name evidence="2" type="ORF">PPSC2_15650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371887.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03300"/>
    <dbReference type="EnsemblBacteria" id="ADO57300">
        <property type="protein sequence ID" value="ADO57300"/>
        <property type="gene ID" value="PPSC2_15650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3341"/>
    <dbReference type="eggNOG" id="COG1832">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112567_0_0_9"/>
    <dbReference type="OMA" id="MVMDRCP"/>
    <dbReference type="OrthoDB" id="1910664at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CoA_binding" evidence="1">
        <location>
            <begin position="15"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="15819" checksum="14F9856A21EA5BDD" modified="2011-01-11" version="1">MAFENPSREEIKNILEQVGNIAVVGLSDKSDRTSYMVSYAMQKRGYRIIPVNPAAAGQTILGETCYASLAEVPEPVELVNVFRRSEYCAEVAREAAAIGAKILWLQQGIISQEAADIAQEHGMMVIMDRCIKVEDSVTQAVRKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8F5</accession>
    <name>E3E8F5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase</fullName>
            <ecNumber evidence="10">2.4.1.227</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">murG</name>
        <name evidence="13" type="synonym">murG3</name>
        <name evidence="13" type="ORF">PPSC2_16605</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UDP-N-acetyl-alpha-D-glucosamine = di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1-&gt;4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + H(+) + UDP</text>
            <dbReference type="Rhea" id="RHEA:31227"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:61387"/>
            <dbReference type="ChEBI" id="CHEBI:61388"/>
            <dbReference type="EC" id="2.4.1.227"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="10">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Peripheral membrane protein</topology>
            <orientation evidence="10">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the glycosyltransferase 28 family. MurG subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.227" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372089.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03940"/>
    <dbReference type="CAZy" id="GT28">
        <property type="family name" value="Glycosyltransferase Family 28"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57504">
        <property type="protein sequence ID" value="ADO57504"/>
        <property type="gene ID" value="PPSC2_16605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3544"/>
    <dbReference type="eggNOG" id="COG0707">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037404_0_1_9"/>
    <dbReference type="OMA" id="AADMMLC"/>
    <dbReference type="OrthoDB" id="1165736at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051991">
        <property type="term" value="F:UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050511">
        <property type="term" value="F:undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030259">
        <property type="term" value="P:lipid glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00033">
        <property type="entry name" value="MurG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006009">
        <property type="entry name" value="GlcNAc_MurG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004276">
        <property type="entry name" value="GlycoTrans_28_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03033">
        <property type="entry name" value="Glyco_transf_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01133">
        <property type="entry name" value="murG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 10" id="KW-0132">Cell division</keyword>
    <keyword evidence="1 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 10" id="KW-0133">Cell shape</keyword>
    <keyword evidence="9 10" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3 10 13" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 10" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_transf_28" evidence="11">
        <location>
            <begin position="3"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_tran_28_C" evidence="12">
        <location>
            <begin position="189"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-N-acetyl-alpha-D-glucosamine binding" evidence="10">
        <location>
            <begin position="10"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="299"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="369" mass="39872" checksum="3C92FBD322E743DC" modified="2011-01-11" version="1">MRVVLSGGGTGGHIYPALAVARQCEEIDPDAEFLYIGGQRGLESKLVPQEKIPFEAIDITGFRRSLSVENIKTIMRFFKGVRRSKALLKKFKPDIVIGTGGYVCGPVVYAASKLGIPSIIHEQNAIPGLTNAFLSRYVDTVAVSFEGSEGAFPKAKNVLYTGNPRATTVRLANRDRGFATLGVPMNSSVVLVVGGSRGAKAINDAMIAMVPQLSQLKDVHFVYVTGESYYEQTLDSIRNQIGSLPNHLHVLPYIHNMPEVLACTSLIVNRAGASFLAEITSLGIPSILIPSPNVTNNHQEANARTLEKAGASVMITEKELSGPALFQSIAEIMKDEARRSQMAELASALGKPDSADILVKEMERLAHNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8V5</accession>
    <name>E3E8V5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Histidine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Histidyl-tRNA synthetase</fullName>
            <shortName evidence="9">HisRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">hisS</name>
        <name evidence="11" type="ORF">PPSC2_19120</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-histidine + tRNA(His) = AMP + diphosphate + H(+) + L-histidyl-tRNA(His)</text>
            <dbReference type="Rhea" id="RHEA:17313"/>
            <dbReference type="Rhea" id="RHEA-COMP:9665"/>
            <dbReference type="Rhea" id="RHEA-COMP:9689"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57595"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78527"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.21"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3 9">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.21" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372628.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06320"/>
    <dbReference type="EnsemblBacteria" id="ADO58053">
        <property type="protein sequence ID" value="ADO58053"/>
        <property type="gene ID" value="PPSC2_19120"/>
    </dbReference>
    <dbReference type="GeneID" id="66576244"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4096"/>
    <dbReference type="eggNOG" id="COG0124">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025113_1_1_9"/>
    <dbReference type="OMA" id="CDFDFIG"/>
    <dbReference type="OrthoDB" id="277998at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004821">
        <property type="term" value="F:histidine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006427">
        <property type="term" value="P:histidyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00773">
        <property type="entry name" value="HisRS-like_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00859">
        <property type="entry name" value="HisRS_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00127">
        <property type="entry name" value="His_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015807">
        <property type="entry name" value="His-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041715">
        <property type="entry name" value="HisRS-like_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004516">
        <property type="entry name" value="HisRS/HisZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033656">
        <property type="entry name" value="HisRS_anticodon"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43707">
        <property type="entry name" value="PTHR43707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13393">
        <property type="entry name" value="tRNA-synt_His"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001549">
        <property type="entry name" value="His-tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00442">
        <property type="entry name" value="hisS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="10">
        <location>
            <begin position="8"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="414" mass="46503" checksum="C4011545BEB3F9F8" modified="2011-01-11" version="1">MAFQKPTGTQDLLPGSVEKWQVVEEKAREISRRFNYREIRTPMFEQTNLFVRGVGETTDVVEKEMYTFEDKGKRSMTLRPEGTAGVVRSYVENKLYGEPDVTKLYYIGPMFRYERPQAGRQRQFHQFGIEAFGAMDPALDAEVIAFGYQFCRELGLKGVQVEINSVGNAASRAAYRQHLVDFLMPIKDTLTKESQARIERNPLRVLDSKDDQDKFGGAPSILDSLDEESSTHFEKVKQNLDAMGVEYTVNPRLVRGLDYYTLTAFEFKAEGIGAIDTIGGGGRYNGLVGDLGGPDQPGIGFGIGLERIQLILEHQGVKLNEAKPLDIYMVALGEAAETEVTKQLFKLRQAGFSAERDYLGRKMKAQMKSADRFKARYTAILGDDELVKGEIALKNMETGEQRTVKLDQLVEELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8W5</accession>
    <name>E3E8W5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Single-stranded-DNA-specific exonuclease RecJ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">recJ</name>
        <name evidence="11" type="ORF">PPSC2_19160</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RecJ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372638.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06360"/>
    <dbReference type="EnsemblBacteria" id="ADO58063">
        <property type="protein sequence ID" value="ADO58063"/>
        <property type="gene ID" value="PPSC2_19160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4105"/>
    <dbReference type="eggNOG" id="COG0608">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009736_4_1_9"/>
    <dbReference type="OMA" id="FIICDHH"/>
    <dbReference type="OrthoDB" id="491634at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008409">
        <property type="term" value="F:5'-3' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001667">
        <property type="entry name" value="DDH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038763">
        <property type="entry name" value="DHH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003156">
        <property type="entry name" value="DHHA1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004610">
        <property type="entry name" value="RecJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018779">
        <property type="entry name" value="RecJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041122">
        <property type="entry name" value="RecJ_OB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01368">
        <property type="entry name" value="DHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02272">
        <property type="entry name" value="DHHA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17768">
        <property type="entry name" value="RecJ_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10141">
        <property type="entry name" value="ssDNA-exonuc_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64182">
        <property type="entry name" value="SSF64182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00644">
        <property type="entry name" value="recJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 11" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHH" evidence="7">
        <location>
            <begin position="82"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="DHHA1" evidence="8">
        <location>
            <begin position="315"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="domain" description="RecJ_OB" evidence="10">
        <location>
            <begin position="457"/>
            <end position="562"/>
        </location>
    </feature>
    <feature type="domain" description="ssDNA-exonuc_C" evidence="9">
        <location>
            <begin position="569"/>
            <end position="790"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="300"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF17768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="798" mass="89112" checksum="E5D6DD99E7D55EE8" modified="2011-01-11" version="1">MLHSQYRWKTPEVNLEAAQPLTEELGISPLLSRLLVNRGVTTAGEANRFLYGSVDDVHDPFLLLGMKEAVPRIRQALERGEHILIYGDYDADGVSSTSLMIQLMRFLKASYDIYIPHRSNEGYGLHNHALDWAHQQGVTLVITVDTGISAVEQIAYATSLGIDVIVTDHHEPPAVLPEAYTLINPKLPDCPYPFKGLAGVGVALKLAQALLSEVPEEWFEIAAIGTVADLMPLHGENRTIVRRGIQSMRNSAFPGIRALLHVAGVEISTVTSVNIAFALAPRINASGRLDHAGRAVSLLTTEKEEEADQLAHALDLLNRERQQVVERIVEQAEQQLASKLNGDKLPSVIVLAGEGWNVGVVGIVASKLLDRYYRPTIILGIDTETGMCKGSARSIPALDIYSALTDCHELMEHFGGHPSAAGMTLSRDHLELFEERLNRYAGSILTPEDFIPIAEADMVCRLDEISLQVVEELELLQPFGMGNPSPRFVLQGLQLREARKMGREKNHVKLLLEQNGLSLDAIAFRRGDLADFLQQQTDIDLLGELSINEWNGKRSLQLMMQDIRVQAPQIFDYRGVSDPLAELERGLRIFHPSLEERKNNVAVLIHPSSMLRPSSSVSAESLWLYDKDGSVTPSEGQKDTQHFVKSLFVLEPPDTPEQFHALWSTFENVENVFLLHSISERGGRLVSPDRELFKRIYIVLSRMGTQLIDEKAMLPALSRQCSCSVRMLSKVLDIFEDLEFLTRTDGQFRFVSNPPKRDLTASPRYQELYNMAEMERYLLDADTTQMTSWIMSLMKGAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Y7</accession>
    <name>E3E8Y7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59194.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886072.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12105"/>
    <dbReference type="EnsemblBacteria" id="ADO59194">
        <property type="protein sequence ID" value="ADO59194"/>
        <property type="gene ID" value="PPSC2_24630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5218"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OrthoDB" id="495395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59194.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="54173" checksum="AA8320D63231057D" modified="2015-05-27" version="2">MKETTTIRAELEQYIRREGITISKFGEKTGINAGTISAIINGNRPIAMLLLDRIAAGMGLEEGSLYELYIDEFIRNTAPNWRRVRPFLHRCAELNKLDCIKQVVEFMMDYLIYAPALFETAEELFSEGRFEAAAIIYKNVAESEKYQHSERLALCQYRLFTITVGDDQDENLWAATHFESFVERLGEADQLDALRDLANTYASLRRWDKVEWFAEKMAQKAKVQYEQKYGNTRKSERGREPKGPLFMYIVYSYVLRAGVWDERGDYQKALEYVSLYSDLSWVQEDTEEARRLKALCSNWAEANGYLYQLMSGSLDVIPQYVDYLEKNEGEILVGLHKIMVAANRYDFNVDHVLQHFEKQIEAFADQHAKVGTYTEQMSADLYARFLAEMACYDLNKHRYSKGMKFLLESLSYSVVLNGNPVTIKCVGLFEKYRHTATSEDKEEYKNLLGEVEYIHDKKDRFFSARI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Z4</accession>
    <name>E3E8Z4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tcyL</name>
        <name evidence="8" type="ORF">PPSC2_24660</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373734.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12155"/>
    <dbReference type="EnsemblBacteria" id="ADO59201">
        <property type="protein sequence ID" value="ADO59201"/>
        <property type="gene ID" value="PPSC2_24660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5224"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_1_4_9"/>
    <dbReference type="OMA" id="EMFAQGK"/>
    <dbReference type="OrthoDB" id="847343at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="179"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="205"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="21"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="238" mass="26925" checksum="34DEC5D9B613B610" modified="2011-01-11" version="1">MEKLFDLDYMLKSLPQIVEYLPVTLWIAFVSMLLGAIIGLATALIRIYKVPVLAPLSTLYVSYIRGTPLIVQLFLVYYGIPKFLYYFQNEYGFLQQFNVYVIPPELFALLSFSLNLGGYLSETFRAAIHSVDRGQFEAANSIGMSQTQIMLKIVLPQALTVALPNLGNTLISTVKDTSFIFMIGVVDMMGQAKIMGARALAFFEVYVAVSLIYWLVCIIIERGLVVLEKRIRIYERSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E940</accession>
    <name>E3E940_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UvrC3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">uvrC3</name>
        <name evidence="2" type="ORF">PPSC2_24850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373780.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12340"/>
    <dbReference type="EnsemblBacteria" id="ADO59247">
        <property type="protein sequence ID" value="ADO59247"/>
        <property type="gene ID" value="PPSC2_24850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5267"/>
    <dbReference type="eggNOG" id="COG0322">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1968508_0_0_9"/>
    <dbReference type="OMA" id="GFTDFHL"/>
    <dbReference type="OrthoDB" id="1744539at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014527">
        <property type="entry name" value="UCP026568_excinuclease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01541">
        <property type="entry name" value="GIY-YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF026568">
        <property type="entry name" value="UCP026568"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00465">
        <property type="entry name" value="GIYc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50164">
        <property type="entry name" value="GIY_YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GIY-YIG" evidence="1">
        <location>
            <begin position="36"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="118" mass="13832" checksum="852E8CDCBCD3E442" modified="2011-01-11" version="1">MINITIPTPDITITKQVNPELSHIYGFTDFHLIPRDKAGIFMFYNAQEELLFVGKARKLRPRIKKHFEDNVSPIKANRKEVAIIEVCIVEDAVDREIYETYIINSQKAKYNVEKVFYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E948</accession>
    <name>E3E948_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">adhB3</name>
        <name evidence="6" type="ORF">PPSC2_24890</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373788.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12380"/>
    <dbReference type="EnsemblBacteria" id="ADO59255">
        <property type="protein sequence ID" value="ADO59255"/>
        <property type="gene ID" value="PPSC2_24890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5275"/>
    <dbReference type="eggNOG" id="COG1063">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026673_11_3_9"/>
    <dbReference type="OMA" id="CCRNFGT"/>
    <dbReference type="OrthoDB" id="787596at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027399">
        <property type="entry name" value="ADH_N_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13823">
        <property type="entry name" value="ADH_N_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ADH_N_assoc" evidence="5">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="domain" description="ADH_N" evidence="4">
        <location>
            <begin position="26"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="ADH_zinc_N" evidence="3">
        <location>
            <begin position="189"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="378" mass="40986" checksum="D2E154142B7B4AA8" modified="2011-01-11" version="1">MKAVTYQGIKNVVVKDVPDPSIQKADDAIIRLTTTAICGSDLHLIHGMIPNLQEDYVIGHEPMGVVEEVGSGVTKLKKGDRVIIPFNIACGECFYCKNQLESQCDHSNEHGEMGGFFGYSGTTGGYPGGQAEYLRVPFANFTHFKIPESCEHPDEKLCLIADAMTTAFWSVDNAGVKDGDTVVIIGCGPVGLLAQKFAWFKGAKRVIAADYLDYRLQHAKRTNHVEIVNVESQENVGNYLKEITKGGADVVIDCSGMSGKMSPLESLASGLKLHGGALGGLVIATQAVRKGGTIQVTGVYGGRYNGFPLGDIFQRNVNLRTGQAPVIHYMPYMYELIDTGKVDPGDVVTHVIPLSDAKRGYEIFDTRQDNCIKVVLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9A6</accession>
    <name>E3E9A6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cell wall hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sleB3</name>
        <name evidence="4" type="ORF">PPSC2_16015</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371965.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03705"/>
    <dbReference type="EnsemblBacteria" id="ADO57379">
        <property type="protein sequence ID" value="ADO57379"/>
        <property type="gene ID" value="PPSC2_16015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3421"/>
    <dbReference type="eggNOG" id="COG3409">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3773">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053345_0_0_9"/>
    <dbReference type="OMA" id="IYSEARG"/>
    <dbReference type="OrthoDB" id="682655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011105">
        <property type="entry name" value="Cell_wall_hydrolase_SleB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042047">
        <property type="entry name" value="SleB_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07486">
        <property type="entry name" value="Hydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168083" evidence="1">
        <location>
            <begin position="29"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="2">
        <location>
            <begin position="39"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="Hydrolase_2" evidence="3">
        <location>
            <begin position="118"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="217" mass="23266" checksum="0D886D3E03582BBF" modified="2011-01-11" version="1">MKKLSILILSCACMLGTVLSVAPGQAQAQSSALKKGIQSERVLELQQQLHSLGYFKAGFTGYYGSLTSKAVARFQRDHGLAPDGIAGAATQAKLDSFGKVRVTALDQLARIIYSEARGESFEGQVAVGAVVLNRVQSGEFPSSIPDVILQPGQFTAVRDGQYRLKPNKTAYRAARQALNGADPTNGSLFYYNPAIATAKWSKSRPAVISLGRHTFTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9B9</accession>
    <name>E3E9B9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcQ9</name>
        <name evidence="2" type="ORF">PPSC2_16070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371978.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03760"/>
    <dbReference type="EnsemblBacteria" id="ADO57392">
        <property type="protein sequence ID" value="ADO57392"/>
        <property type="gene ID" value="PPSC2_16070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3434"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021021_3_2_9"/>
    <dbReference type="OMA" id="ILYHQQP"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168725" evidence="1">
        <location>
            <begin position="27"/>
            <end position="506"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="506" mass="56346" checksum="11F4A25795918F13" modified="2011-01-11" version="1">MKKGIKMKKGVSGLLAALMVMSVFLAACGDKGTEDQGSQTYDPKSKLEFTWLNVLHTASPPTETIKSKIEEYTNSKITFNWVPDASKEERITTALASGELADMVTLTMMTNSSVRSSLKSGLFWDVGKYLDDYENLKKIPPEVREAASIEGVLYGVPFQKNLARAGLVIRQDWLDRLGLKVPTTLDELYEVARAFTEDDPDGNGKNDTTGFVDRSDLRYSSFKTLSSYFGTPNGWKVDENGKFTPEFDTPQYLETLKYSNKLYKNGYLSKDFAVTAKTDQQQQFAQGKAGIYTGMIDISNLRTLSQGLQKGLKLVPVNKISNGDGQYHVWSEGSGVGGLLAFPKSEVKTEAELKRLLQFVDDLIDKDVYMYMTGGLEGTHYKIEKDGSFKITNTDLWQADVQPFSSSRPSEVTYNLKDANPEKELANELVRENNKFAVLDPTVPLDSATANEQGTELEKIITDASFKFIMGEIDEAGFKAAVENWKQSGGARITTEYEEAYKKSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9C1</accession>
    <name>E3E9C1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Protein lplB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplB13</name>
        <name evidence="7" type="ORF">PPSC2_16080</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371980.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03770"/>
    <dbReference type="EnsemblBacteria" id="ADO57394">
        <property type="protein sequence ID" value="ADO57394"/>
        <property type="gene ID" value="PPSC2_16080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3436"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="OMA" id="IWREAGW"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="130"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="234"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="287"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="93"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="321" mass="36590" checksum="053F5098118670EC" modified="2011-01-11" version="1">MKVSSVPAPNMKMKMKKNKRTTESLLRMQKHKLLYLMVLPGLVYFIIFKYFPMGGLVIAFQDYQAFQGITGSPWVGMKHFIRLFTEPTFFMLLRNTLILFALNIVIFFPLPIILALMLNEVRKMFFKNIIQTIIYIPHFMSWVIIVSISYVFLTVDGGVLNEMIAALGGEKISFLTSPQWLRTVYIGQVIWKELGWSTIIYLSAITVVDTQLYEAAEMDGAGRLRKTWHVTLPAIRPVIITLLILKIGSTLDLGFEHMYLLLNSLNREVAEIFDTYIYTAGLKNGQLSFSTTVGLFKGVVGLILIMLSNRLAKKFGEDGVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9D7</accession>
    <name>E3E9D7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Holin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_16160</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the bacteriophage holin family. Cp-1 holin subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3453"/>
    <dbReference type="EnsemblBacteria" id="ADO57410">
        <property type="protein sequence ID" value="ADO57410"/>
        <property type="gene ID" value="PPSC2_16160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3451"/>
    <dbReference type="eggNOG" id="COG4824">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_125939_0_1_9"/>
    <dbReference type="OMA" id="IMFYILY"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006480">
        <property type="entry name" value="Phage_holin_4_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05105">
        <property type="entry name" value="Phage_holin_4_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01593">
        <property type="entry name" value="holin_tox_secr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="48"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="17563" checksum="5D872447322A0ABD" modified="2011-01-11" version="1">MSQIKMFGSTVWTAMVGASEKEAAAGGVTALTGLIVTFLGGWDKPLQVLLIAMLLDYVSGVIAALKNKKMDSDVMFWGGIRKVTVLMVVGLSAQMDDWLQPGAPLFRTAAIYFYAGREGLSLAENLGAIGIPLPFKLKSFLKQLNEKGDGQDGTTDAGTDTKKVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA23</accession>
    <name>E3EA23_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">kfoC</name>
        <name evidence="3" type="ORF">PPSC2_19675</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372728.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06895"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58156">
        <property type="protein sequence ID" value="ADO58156"/>
        <property type="gene ID" value="PPSC2_19675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4195"/>
    <dbReference type="eggNOG" id="COG1215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065533_0_0_9"/>
    <dbReference type="OMA" id="AARFWRM"/>
    <dbReference type="OrthoDB" id="1445278at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="266"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="9"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="34442" checksum="1ACAAFA7F4139594" modified="2011-01-11" version="1">MDKVVILFSTYNNERTIEPCLRSCLGQNYKDLHIVVADDGSDDRTVETIRMLSAGSSVPVTILELPHGERGVARVRAVEEAKHLGAEYIFVLDSDMILAEHLIQQSIDFFDNHQDIGALVVPEEAYSEANNFFSKVKVFERNVINNAGETLGKRSIEAARFWRMSAYESTGGFNAEQIAFEEIQPTLRYIESGGVIRRAVFTRVYHDEKQVYLQDVLRKKAYYFSVMDRTMSSEEGGLRKALERWYFFRPVLYTWGNVKNYIRHPLLTAGMLWMYTCLTVIGVAAMLKGGTRHSGDLAKADKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA30</accession>
    <name>E3EA30_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">Polyphosphate kinase</fullName>
            <ecNumber evidence="6 7">2.7.4.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">ATP-polyphosphate phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Polyphosphoric acid kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 13" type="primary">ppk</name>
        <name evidence="13" type="ORF">PPSC2_20415</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7">Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7">
            <text>[phosphate](n) + ATP = [phosphate](n+1) + ADP</text>
            <dbReference type="Rhea" id="RHEA:19573"/>
            <dbReference type="Rhea" id="RHEA-COMP:9859"/>
            <dbReference type="Rhea" id="RHEA-COMP:14280"/>
            <dbReference type="ChEBI" id="CHEBI:16838"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="PTM">
        <text evidence="6 7">An intermediate of this reaction is the autophosphorylated ppk in which a phosphate is covalently linked to a histidine residue through a N-P bond.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the polyphosphate kinase 1 (PPK1) family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.1" evidence="6 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372893.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07670"/>
    <dbReference type="EnsemblBacteria" id="ADO58322">
        <property type="protein sequence ID" value="ADO58322"/>
        <property type="gene ID" value="PPSC2_20415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4355"/>
    <dbReference type="eggNOG" id="COG0855">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009678_5_0_9"/>
    <dbReference type="OMA" id="NIKWARK"/>
    <dbReference type="OrthoDB" id="76567at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009358">
        <property type="term" value="C:polyphosphate kinase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006799">
        <property type="term" value="P:polyphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1840.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00347">
        <property type="entry name" value="Polyphosphate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003414">
        <property type="entry name" value="PP_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041108">
        <property type="entry name" value="PP_kinase_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024953">
        <property type="entry name" value="PP_kinase_middle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036830">
        <property type="entry name" value="PP_kinase_middle_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025200">
        <property type="entry name" value="PPK_C_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025198">
        <property type="entry name" value="PPK_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036832">
        <property type="entry name" value="PPK_N_dom_sf"/>
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        <property type="entry name" value="PTHR30218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02503">
        <property type="entry name" value="PP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13090">
        <property type="entry name" value="PP_kinase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17941">
        <property type="entry name" value="PP_kinase_C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13089">
        <property type="entry name" value="PP_kinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015589">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140356">
        <property type="entry name" value="SSF140356"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03705">
        <property type="entry name" value="poly_P_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 6 13" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 6 7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PP_kinase_N" evidence="10">
        <location>
            <begin position="16"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="PP_kinase" evidence="9">
        <location>
            <begin position="130"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="domain" description="PP_kinase_C_1" evidence="12">
        <location>
            <begin position="340"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="domain" description="PP_kinase_C" evidence="11">
        <location>
            <begin position="513"/>
            <end position="684"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="241"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphohistidine intermediate" evidence="6">
        <location>
            <position position="444"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="384"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="414"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="477"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="573"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
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        <location>
            <position position="601"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF13090"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF17941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="702" mass="80788" checksum="57B8649E8CB88284" modified="2011-01-11" version="1">MLIESQKKDKAGSERYFNRDLSWIEFNRRVLQEAQDSDTPLLERAKFLAIVSSNLDEFMAVRVAETREKIKAGFMQKDFTGYTPSGLYKRLIKRTVSMVSEQYRTYRDISRLLTKKGLLLLEYNDLNTTQRKSLDAYFHEIIFPVLTPMAVDQSRPFPLVHNKYVYLAVVLRRPGDTEEDKPLFAIVQVPSNIPRVVSVPLRSNSKKKSFILIEELIKHHIQTLFSGYIPEAVHAFRVTRNSDLSINEEEIEDLLEEIEKELRRRRRGAPVRLEVEKGINPFALMELQREFKLFDHVFEIDGPLDLTFLSSFADHLEGYSHLKFPAIKPLYPEELPPQEDIFNVLRKRDVLVYHPYESFDAVTDFIIEASEDPDVMAIKMTLYRVNGESKLIPALARAAESGKQVTVVVELKARFDEERNIAWARTLEKAGCHVVYGLVGLKTHAKIILIVRHERNVLKRYVHVGTGNYNESTARVYTDIGLFTADPVLGEDASELFNEITGFSALKTPQAFTVAPTGMKNKLFELIRREAEHALAGKPARIIAKINSLSNQEMIDELYAASQAGVKIDLIIRGVCCLRPGVEGFSENIRVISIVDRFLEHSRLFYFENAGHSELFLSSADWMTRNLTRRIELMCPIYDDRIKEMLVDILRLSLKDNVKARQLLTNGSYQFVARNNEEAPIRSQFEAMKVKNWKKEEWTTTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA38</accession>
    <name>E3EA38_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_20450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="EnsemblBacteria" id="ADO58330">
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        <property type="gene ID" value="PPSC2_20450"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20450"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4362"/>
    <dbReference type="eggNOG" id="ENOG50344R3">
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    <dbReference type="OrthoDB" id="1511537at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="22131" checksum="10271B021D68102B" modified="2011-01-11" version="1">MGELSGHTQTVEPQPKSIRKLAVVATVISVVAVLGCIALAVWNYNLNTKVNSLTMANASLKQTTQALTKQQNDTEALLGKVKLAANLSSITHLLEQTSVVTDDFVLEKVTFNVAEDGKLKGVLLNVNNQPNLGFGGAYQGYGKYNMSSAALTKKAEEVINIAMKEYNTSDKLPVWDKNTKVEMTVQNYPLGKREGGIFKLTGQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA52</accession>
    <name>E3EA52_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Bacterial nucleoid DNA-binding protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_20520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58344.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07775"/>
    <dbReference type="EnsemblBacteria" id="ADO58344">
        <property type="protein sequence ID" value="ADO58344"/>
        <property type="gene ID" value="PPSC2_20520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4377"/>
    <dbReference type="eggNOG" id="ENOG5030ZJD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1160179_0_0_9"/>
    <dbReference type="OMA" id="HYMNTEM"/>
    <dbReference type="OrthoDB" id="1309000at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="HEPN_Cthe2314"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18730">
        <property type="entry name" value="HEPN_Cthe2314"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HEPN_Cthe2314" evidence="1">
        <location>
            <begin position="52"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="28244" checksum="45A6A1C86D57F210" modified="2011-01-11" version="1">MIRKLLGEPSRVNNGFLLDAMNSMSDMLHLLERQIQASGDPTHDFRKADILTRGLMSSLDELEQSHHAAAFFRMKVKAGYAEDMSKDEKSDYALYVFFYKDGFVRVFSILDKLGNWMNDLYDLKTGQYKAHYSYFTVLRQLKYLKMHPVLTDNLIDIKDTYNDAINRLRKRRNTEIHYMNTEMQDDLWQRHRALYGKIQLEDLDHHLEDLQQGLEMVCRSLSNAFSYTAKQWENRAVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAJ3</accession>
    <name>E3EAJ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">DNA integrity scanning protein DisA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">yacK</name>
        <name evidence="11" type="ORF">PPSC2_22570</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 ATP = 3',3'-c-di-AMP + 2 diphosphate</text>
            <dbReference type="Rhea" id="RHEA:35655"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:71500"/>
            <dbReference type="EC" id="2.7.7.85"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373290.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10035"/>
    <dbReference type="EnsemblBacteria" id="ADO58751">
        <property type="protein sequence ID" value="ADO58751"/>
        <property type="gene ID" value="PPSC2_22570"/>
    </dbReference>
    <dbReference type="GeneID" id="66575552"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4785"/>
    <dbReference type="eggNOG" id="COG1623">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_787128_0_0_9"/>
    <dbReference type="OMA" id="VVRDYVP"/>
    <dbReference type="OrthoDB" id="1139866at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106408">
        <property type="term" value="F:diadenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01438">
        <property type="entry name" value="DisA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038331">
        <property type="entry name" value="DisA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036888">
        <property type="entry name" value="DNA_integrity_DisA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018906">
        <property type="entry name" value="DNA_integrity_scan_DisA_link"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003390">
        <property type="entry name" value="DNA_integrity_scan_DisA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023763">
        <property type="entry name" value="DNA_integrity_scanning_protein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02457">
        <property type="entry name" value="DAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10635">
        <property type="entry name" value="DisA-linker"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143597">
        <property type="entry name" value="SSF143597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51794">
        <property type="entry name" value="DAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAC" evidence="10">
        <location>
            <begin position="7"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="358" mass="40601" checksum="E096E1AD661BE115" modified="2011-01-11" version="1">MKEASQLDKMNDLLRLVAPGTPFRDGLENVLRAKTGALLVVGYSPEVMEVVDGGFSINCDFSPNYLYELAKMDGAIILSEDLKRILYANTQLIPDSSISSIETGIRHRTAERVAKQTGKLVVSISQRRNIITLYQGTLRYALKEIGVILTKANQAIQTLEKYRSVLGQASTNLTASEFEELVTMPEVVNVIQRIEMVLRIKMEIKRFINELGNEGRLISMQMEELVSNIEEEAWLLYKDYAKDDSDEKIREIILGLKRSTDDELLDVNHIVRLLGYPSSAATSEEYIAARGYRVLNKIPRLPNVIIHNLVERFGRFPHVMTATIEELDEVDGIGEVRARTIKEGLKRLQEQVFIDRQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAK8</accession>
    <name>E3EAK8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">dTDP-glucose 4,6-dehydratase</fullName>
            <ecNumber evidence="4 5">4.2.1.46</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">spsJ</name>
        <name evidence="7" type="ORF">PPSC2_22665</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>dTDP-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O</text>
            <dbReference type="Rhea" id="RHEA:17221"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57477"/>
            <dbReference type="ChEBI" id="CHEBI:57649"/>
            <dbReference type="EC" id="4.2.1.46"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 5">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.46" evidence="4 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373305.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10140"/>
    <dbReference type="EnsemblBacteria" id="ADO58766">
        <property type="protein sequence ID" value="ADO58766"/>
        <property type="gene ID" value="PPSC2_22665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4800"/>
    <dbReference type="eggNOG" id="COG1088">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_1_14_9"/>
    <dbReference type="OMA" id="LDNKQWW"/>
    <dbReference type="OrthoDB" id="707977at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008460">
        <property type="term" value="F:dTDP-glucose 4,6-dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009225">
        <property type="term" value="P:nucleotide-sugar metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05246">
        <property type="entry name" value="dTDP_GD_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005888">
        <property type="entry name" value="dTDP_Gluc_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01181">
        <property type="entry name" value="dTDP_gluc_dehyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0946">Virion</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="6">
        <location>
            <begin position="4"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="339" mass="38257" checksum="FFFDE665581585EE" modified="2011-01-11" version="1">MKLLVTGGAGFIGSNFVLYMLKQHPDYEIVNIDALTYAGNLENLKSIENHPKHTFVKADITDAQAIDQLMQQGIDVVVNFAAESHVDRSILEPEVFVKTNVLGTQVLLDAAKKYNVTKFVQVSTDEVYGSLGETGLFTEETPLQPNSPYSASKAGGDLLVRAYHETFGLPVNITRCSNNYGPYQFPEKLIPLMISRALSDQQLPVYGDGLNIRDWLYVEDHCSAIDMVIHQGKLGEVYNIGGNNERTNVHIVKTVLEELGKPESLISYVQDRPGHDRRYGIDPTKTMNELGWTPKHSFETGIKETIRWYLDNEEWWTRIQSGEYQQYYAKQYGSRLGDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAM1</accession>
    <name>E3EAM1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Trypsin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_22730</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373318.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10245"/>
    <dbReference type="EnsemblBacteria" id="ADO58779">
        <property type="protein sequence ID" value="ADO58779"/>
        <property type="gene ID" value="PPSC2_22730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4813"/>
    <dbReference type="eggNOG" id="COG0265">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020120_0_0_9"/>
    <dbReference type="OMA" id="YDAKAYK"/>
    <dbReference type="OrthoDB" id="741829at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001940">
        <property type="entry name" value="Peptidase_S1C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00834">
        <property type="entry name" value="PROTEASES2C"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0720">Serine protease</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168105" evidence="5">
        <location>
            <begin position="26"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="6">
        <location>
            <begin position="300"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="376"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="42391" checksum="413CB693385AF33A" modified="2011-01-11" version="1">MRKMGKRVAVLALGSALCVSGTAGAASSGTALKAKVINGGIYVNVSEMNKALGTNGAYNSANGTYTLSADRVPQVVKNVSPSVVGIIGRSATGETVAGGDRYNLAHGTGVIIRADGWIVTNAHVIEGLGDAVVVTSDGKSYGIIDSYSDPISDLALIKIKASGLKPATFAASTNSLQVGEQVVAIGTPISFSLRNSATSGVVSGLNRGVNAAYRLIQSDTAINPGNSGGPLVNLKGEVIGINTMKFSAVGIENMGFSIPADTVKYVINQFFKYGEVRRASLGLGLEESWSAIVGLPTEDPLKVTKITSANAVQAKIKEGDELYSINGKRVASAIDVNELLKNYQPGQTISVLMQSDGDIVKRKLVLTQDNGEIYDSIQSGEDLEDSNESGATVDDGIAPSKEASDSATGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB06</accession>
    <name>E3EB06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="17">PTS mannose transporter subunit IIABC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">manP</name>
        <name evidence="17" type="ORF">PPSC2_25025</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373819.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12520"/>
    <dbReference type="EnsemblBacteria" id="ADO59286">
        <property type="protein sequence ID" value="ADO59286"/>
        <property type="gene ID" value="PPSC2_25025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5303"/>
    <dbReference type="eggNOG" id="COG1299">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1445">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1762">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013155_0_3_9"/>
    <dbReference type="OMA" id="QPIMPII"/>
    <dbReference type="OrthoDB" id="1810962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005351">
        <property type="term" value="F:carbohydrate:proton symporter activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022877">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00211">
        <property type="entry name" value="PTS_IIA_fru"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="PTrfase/Anion_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002178">
        <property type="entry name" value="PTS_EIIA_type-2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
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        <property type="entry name" value="PTS_EIIB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003501">
        <property type="entry name" value="PTS_EIIB_2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
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    <dbReference type="InterPro" id="IPR003353">
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <dbReference type="Pfam" id="PF02378">
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    </dbReference>
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    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00848">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01427">
        <property type="entry name" value="PTS_IIC_fructo"/>
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    </dbReference>
    <dbReference type="PROSITE" id="PS51094">
        <property type="entry name" value="PTS_EIIA_TYPE_2"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <dbReference type="PROSITE" id="PS51104">
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="11 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="129"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="173"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="224"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="255"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="297"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="338"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="398"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="438"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-2" evidence="15">
        <location>
            <begin position="1"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-2" evidence="16">
        <location>
            <begin position="125"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-2" evidence="14">
        <location>
            <begin position="519"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="474"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO59286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="665" mass="69824" checksum="D18B7EC449499FF8" modified="2011-01-11" version="1">MKILAITSCPNGIAHTYMAAENLQKAAAKLGIEMKVETQGSIGVENQLTEQEIREADGIIIAADKTVVKDRFVGKKLLVVGVQDGIRRPEELIQRVMKGNVPVYRAESRASEASSQENKPKQNPIYRHLMNGVSYMVPFIVIGGLLIAIALTIGGEKTPGGLVIPDGSFWKTVQDIGSASFTFMIPILAGFIAMSIADRPGLAPGMVGGFIAANGSFYGSEAGAGFIGGIIAGFLAGYVALGIRKMKVGRALQPIMPIIIIPVLSSLIVGLIFVFIIGSPVAQLFEALTGWLAGMQGTSSILLALILGAMISFDMGGPVNKVAFLFGSAMIGEGNYEIMGPIAVAICIPPIGMGLAAMINKRKFAPAEREAGKATFTMGLFGITEGAIPFAAQDPLRVIPSIMAGSMVGSVIAMLGNVGDKVAHGGPIVAILGAVDNVFMFFIAVIVGAAVSVILVSLLKRDIATANPAVAGEETSGNSAAVTEQSTMTTTAAESSASAIANNEPEVSSQAIHIEKLTDIVTMDLINLDLEGTTQDAVIDEMIGALERNGAVSSASGFKQAILDREKESSTGIGMNIAIPHGKSEAVLKPSVVFGVKRSGVDWKSMDGSEAKLIFMIAVPRNSKDNAHLKVLQMLSRKLMDDHFREALLAVTTKEDAYQLLTQVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB46</accession>
    <name>E3EB46_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5390"/>
    <dbReference type="EnsemblBacteria" id="ADO59326">
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        <property type="gene ID" value="PPSC2_25210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5343"/>
    <dbReference type="eggNOG" id="ENOG50308PP">
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    <dbReference type="HOGENOM" id="CLU_119984_0_0_9"/>
    <dbReference type="OMA" id="MCSISEY"/>
    <dbReference type="OrthoDB" id="1184023at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="24624" checksum="9848485D55873DEA" modified="2011-01-11" version="1">MSNENQMNILVERTNCILYYAGSDLSNEHSAGWIGGNAPEFFDDQEDLIQEGNPKYVFYLSLVHPFKPESMISIFIPEDYEEYLENNIYPNCSIKVIEHPISTESVKDMFTNPGLIKHTISNGELSHDEKSMDQPFLIKVGGNPRLIQNEDYYFTKLREESFSFLFQVDEDGYPETLLQEDYNYPFGFGSLYIFAKMGTTEIQHPVAGFWQFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBC9</accession>
    <name>E3EBC9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_21160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08390"/>
    <dbReference type="EnsemblBacteria" id="ADO58461">
        <property type="protein sequence ID" value="ADO58461"/>
        <property type="gene ID" value="PPSC2_21160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4498"/>
    <dbReference type="eggNOG" id="ENOG50333BQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089482_0_0_9"/>
    <dbReference type="OMA" id="ERIACIV"/>
    <dbReference type="OrthoDB" id="1749015at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045507">
        <property type="entry name" value="DUF6483"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20092">
        <property type="entry name" value="DUF6483"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="25436" checksum="4905426D24D6603C" modified="2011-01-11" version="1">MLRKDYLLSMMEELTSAVASVLGLRRENKHVEALKQLDELLNKQFRLRSDLLRRLPPEQIIELFRMGPGMEADELQQVARILEEEAVIYMETSRLDEGIRILMKSLHLYLYSDLNGATRDLQVLPERIACIVKLLHEYELSPETSKLLAVHYERENRLDQAADVWFGLAWEQPELRSEAETFYSQLLDKTDAELERGGISRQEIIEGLSEITQLHERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBE8</accession>
    <name>E3EBE8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pfpI3</name>
        <name evidence="2" type="ORF">PPSC2_21920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373188.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09065"/>
    <dbReference type="EnsemblBacteria" id="ADO58622">
        <property type="protein sequence ID" value="ADO58622"/>
        <property type="gene ID" value="PPSC2_21920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4664"/>
    <dbReference type="eggNOG" id="COG0693">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_44_4_9"/>
    <dbReference type="OMA" id="SGTNDHL"/>
    <dbReference type="OrthoDB" id="1421548at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="1">
        <location>
            <begin position="3"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="18263" checksum="3DC49784B4B7A064" modified="2011-01-11" version="1">MSKKALFIIPPERFNEDELFKPKEALEQAGVTVTLASTKTGEIVGDYNGKATADLVFTDAVLADYDLVSVIGGSGTNDHLWNNADLQALLKQAHKQKTLVGGICAGSVAVAQTGLLSGRTATCYPVDVQKDQLQAHQAEYVAQHVVAHSDIITADGPDGTQEFGRALVQALQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBN0</accession>
    <name>E3EBN0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Translational regulator CsrA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">csrA</name>
        <name evidence="3" type="ORF">PPSC2_23035</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CsrA/RsmA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373386.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10520"/>
    <dbReference type="EnsemblBacteria" id="ADO58848">
        <property type="protein sequence ID" value="ADO58848"/>
        <property type="gene ID" value="PPSC2_23035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4879"/>
    <dbReference type="eggNOG" id="COG1551">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_164837_0_2_9"/>
    <dbReference type="OMA" id="IHRKEVY"/>
    <dbReference type="OrthoDB" id="2032250at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048027">
        <property type="term" value="F:mRNA 5'-UTR binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045947">
        <property type="term" value="P:negative regulation of translational initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902208">
        <property type="term" value="P:regulation of bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006109">
        <property type="term" value="P:regulation of carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.4380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00167">
        <property type="entry name" value="CsrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003751">
        <property type="entry name" value="CsrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036107">
        <property type="entry name" value="CsrA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34984">
        <property type="entry name" value="PTHR34984"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02599">
        <property type="entry name" value="CsrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117130">
        <property type="entry name" value="SSF117130"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00202">
        <property type="entry name" value="csrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="8916" checksum="A24BF5CA57ADE4A8" modified="2011-01-11" version="1">MLVLSRKKGESIIIQDHIEVTVLGVEGDTVRIGISAPKQMDIFRKEIYLSIQESNRESAAYSQLNLDALRKMINKNNGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX9</accession>
    <name>E3EBX9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">4-O-beta-D-mannosyl-D-glucose phosphorylase</fullName>
            <shortName evidence="4">MGP</shortName>
            <shortName evidence="4">Mannosylglucose phosphorylase</shortName>
            <ecNumber evidence="4">2.4.1.281</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">unk1</name>
        <name evidence="5" type="ORF">PPSC2_24210</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>4-O-beta-D-mannopyranosyl-D-glucopyranose + phosphate = alpha-D-mannose 1-phosphate + D-glucose</text>
            <dbReference type="Rhea" id="RHEA:32531"/>
            <dbReference type="ChEBI" id="CHEBI:4167"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58409"/>
            <dbReference type="ChEBI" id="CHEBI:64351"/>
            <dbReference type="EC" id="2.4.1.281"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the glycosyl hydrolase 130 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.281" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373638.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11735"/>
    <dbReference type="EnsemblBacteria" id="ADO59103">
        <property type="protein sequence ID" value="ADO59103"/>
        <property type="gene ID" value="PPSC2_24210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5126"/>
    <dbReference type="eggNOG" id="COG2152">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046648_4_0_9"/>
    <dbReference type="OMA" id="KYAFYTR"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00928">
        <property type="entry name" value="Man_Glc_phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028583">
        <property type="entry name" value="Man_Glc_phosphorylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007184">
        <property type="entry name" value="Mannoside_phosphorylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34106">
        <property type="entry name" value="PTHR34106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04041">
        <property type="entry name" value="Glyco_hydro_130"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016202">
        <property type="entry name" value="PH1107"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="399" mass="45388" checksum="878E44849F9C9C05" modified="2011-01-11" version="1">MIHSKYNELLLQQEELITRPNEVKTSFYNGIYERYLYPVLTRHHVPIHWRFDLDAQTNPFFMERLGVNAALNPGAIYHEGKYILVSRTEGLDRKSFFALAESDNGIDQFRFIDAPLVWDDIDPDETNMYDMRLVKHEDGWIYGIYCSEKKDPDAPAHDTSSAVAQAGLVRTRDLRTWTRLPNITTQSPQQRNVVLHPEFVDGQYAFYTRPQDGFISTGSGGGIAFGLCKDITQPVIEHETVIDERYYHTVYEVKNGQGPAPIKTSRGWIHIAHGVRNTAAGLRYVLYTFATSLEDPTRVIAKPGGHFLAPYDEERVGDVSNVIFCNGAVVNERDEVFIYYASSDTRIHVATTTIARLEDYTFNTPSDPLRSLGSAAIRRELIHRNEALLQASNRPSQQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECP2</accession>
    <name>E3ECP2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore gernimation protein GerC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gerAC1</name>
        <name evidence="4" type="ORF">PPSC2_04120</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369449.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0831"/>
    <dbReference type="EnsemblBacteria" id="ADO54814">
        <property type="protein sequence ID" value="ADO54814"/>
        <property type="gene ID" value="PPSC2_04120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.821"/>
    <dbReference type="eggNOG" id="ENOG502Z9N7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051140_0_0_9"/>
    <dbReference type="OMA" id="CWNYREI"/>
    <dbReference type="OrthoDB" id="1421701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02887">
        <property type="entry name" value="spore_ger_x_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="402" mass="44721" checksum="31B5FD7655A54E90" modified="2011-01-11" version="1">MKQTIHLFFVWGLIALLLGGCWDRKELNELGIAIGIGVDMEGDQYQVTAQVVIPSAVASKSSPSAGSPVVTYEATAPTIQEAIQKMTDTSPRIIYLSHIRMLILGEEYARRGISDAIEALMREPFTRSDFYIAIAKNNKASTMLKIPTPLEKLPANKMFASLDTLTKTWAPATKVTMDQLLSDLANPDIQPTLPALEALGDTESSNEKGVDDIKSISPGTTLRFSGIGVLKKDRLLGWINEQDSKGFNYIRNTVESTTGHVDCQGGGNIALLTLNSETQRKVIIRDGEPVISISVTNDSTIREVNCQHMKLSSMADIKEIEAASNEKIVEILRHSVETVRREFKSDIFGFGQLIHQSKPELWKRLKEEKENPFMDLQIEYKAKTTIKKIGSLFESFQKEMKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECP5</accession>
    <name>E3ECP5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytochrome C biogenesis protein CcdC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ccdC1</name>
        <name evidence="2" type="ORF">PPSC2_01735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368979.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14525"/>
    <dbReference type="EnsemblBacteria" id="ADO54339">
        <property type="protein sequence ID" value="ADO54339"/>
        <property type="gene ID" value="PPSC2_01735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.348"/>
    <dbReference type="eggNOG" id="COG4846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112887_1_0_9"/>
    <dbReference type="OMA" id="GIIWFFG"/>
    <dbReference type="OrthoDB" id="1851222at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031306">
        <property type="entry name" value="CcdC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39164">
        <property type="entry name" value="PTHR39164"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07301">
        <property type="entry name" value="DUF1453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="161" mass="18442" checksum="715CF558E59CFAA5" modified="2011-01-11" version="1">MTTIFIYALMAVLVGLMIWLRTKRRRGPVKGNGFRILLPMFIAFPAMMISVYQLMHIPGQTYALPAFWELLVAGLLGALFGYVVLLHTAYERRDDGLIYPKPNQYFKYIIIAIILIRVVLTQYLSSLGTTEISMLAITMALVYISIWRIGSFIKFRRTLSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS2</accession>
    <name>E3ECS2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Serine protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">vpr</name>
        <name evidence="9" type="ORF">PPSC2_01865</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369006.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14630"/>
    <dbReference type="EnsemblBacteria" id="ADO54366">
        <property type="protein sequence ID" value="ADO54366"/>
        <property type="gene ID" value="PPSC2_01865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.375"/>
    <dbReference type="eggNOG" id="COG1404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004945_0_0_9"/>
    <dbReference type="OMA" id="GYDSFEQ"/>
    <dbReference type="OrthoDB" id="923655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07474">
        <property type="entry name" value="Peptidases_S8_subtilisin_Vpr-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003137">
        <property type="entry name" value="PA_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023827">
        <property type="entry name" value="Peptidase_S8_Asp-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034213">
        <property type="entry name" value="S8_Vpr-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02225">
        <property type="entry name" value="PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="SSF52743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00136">
        <property type="entry name" value="SUBTILASE_ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 9" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0720">Serine protease</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168785" evidence="7">
        <location>
            <begin position="32"/>
            <end position="1428"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="8">
        <location>
            <begin position="1239"/>
            <end position="1297"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="8">
        <location>
            <begin position="1298"/>
            <end position="1361"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="8">
        <location>
            <begin position="1365"/>
            <end position="1428"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="981"/>
            <end position="1026"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1001"/>
            <end position="1026"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1428" mass="150150" checksum="00115F19DA9DFD41" modified="2011-01-11" version="1">MKKPIILQKIPVVSLALALTVSLSLPSFSSAATADLQINSFLKAQEALTIEAAPAFISPELSTDSSRQVRVIVQLDGEPLAVDKYAARSSAKAFTAQSEQKAESAIATEQTTFVDQAAEHGISLQVNYQYNTVLNGLEVTVPANKIPELAKLPGVKSIHENKTYYSIPVQDPPTLTANEATYDNAPLDQIGVPEAWAKGLNGEGIKVGVIDTGIDYEHPDLKEAYKGGYDSFEQDNDPYEEPFLEKENDPYGTGFSGTTHGTHVSGTIAGKAANKSSDIVQKGIAYKSDLYVYKVLGRNTKTGRSSGSSAQVIDGIERAVKDGMNVINLSLGSDSEKDPNSPDAIAINNAVLSGVVAVIANGNAAQQGPYFYSMGSPATSQLAISVGAATSPSHSYSNKASVNLVTYGDDEKPITVTSDTYYNFNMMGWQTFHEDFSSILGTEPLELVYANLGYPDDFTSKDVKGKVVVVSRGVLGFVDKIANAQLNGAKAIIIFNGQAKSSDSTQANLSEAIPGYDGYINSNQGDNVDYIPTFDMTGKEGRALARQIIESQNHKQKFFITFGEEYRRTDNPGNTMAGFSSRGPNGDELLSIKPDVSAPGVGIMSTYPAFAKFYPDASYEQAYKRSNGTSMASPHVAGLAVLLKQQHPNWTPFDIRAALANTSVTLFNEDKTQYDVYSQGAGLVNIANAIQTPALLETVEKITILDKNFNRQEVVNYNPSASFGLLRPGSDAKQIQLQLKNLSANPVQYEASYVLHDNVTSDPTKPIATPDVSNISVQLQGIGANGAISAEPGKSQPFFLSVQPSANAATGVYEGEVILKSAGQPTLHLPFVVHVGKENPTTGFGLQDLSFTNPIIYPNRTGAQRTTDLTFRLTTDKTNQIALYVYGLDDKLIGLIDGIATTKEQGANARLKQGAYSFKGINGSYVEFDDNGKPVLDANGQPVIQHLKDGVYKLEVSSPELNEKGEVERNTDGPKLFTATKSIRVDNSAPSGGSSGGGGGGGGGRSNTTPSAATNTSTPVATSAPSLQSVVKQGQAVKAVPTAVALNNNVQSLTVADADLQAAVATAGSSPTAIVLSATSQAGQTTKASLTSSQLATLGKAAAGSSLVVSNTGSSLALPVSVLKNAPEGAGIEVVISSQAEASGTFTSKLKGSNVIGTPVGFEANVITGGKSQPLKVAPGQFISRSFTVPGQIDPNTAGVLYTANGNVYPVPSVFTKQVDGSTVVKVSRPGFSTYAAATRPVSFEDISSSYAQSEIQSLANKLLINGTTDTKFSPKQNVTRAEFAVLVTRALGLTPGTAAPFSDIPAGSWYAGDVAAAYGAGLITGRNNDKFDPQANISRQEIAVVLGKAVDLLQIKTAADGPARTPYHDTSSFAGYAKDSIEKVSAAGIINGATIKGSSYFQPNAPTTREASAKVLHVLLQKAALIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS7</accession>
    <name>E3ECS7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">GNAT family acetyltraansferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjdJ</name>
        <name evidence="3" type="ORF">PPSC2_01890</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14655"/>
    <dbReference type="EnsemblBacteria" id="ADO54371">
        <property type="protein sequence ID" value="ADO54371"/>
        <property type="gene ID" value="PPSC2_01890"/>
    </dbReference>
    <dbReference type="GeneID" id="66574603"/>
    <dbReference type="KEGG" id="ppm:PPSC2_01890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.380"/>
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        <property type="taxonomic scope" value="Bacteria"/>
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    <dbReference type="OrthoDB" id="1872172at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031165">
        <property type="entry name" value="GNAT_YJDJ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31435">
        <property type="entry name" value="PTHR31435"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14542">
        <property type="entry name" value="Acetyltransf_CG"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51729">
        <property type="entry name" value="GNAT_YJDJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="N-acetyltransferase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="10478" checksum="EF7E69B828BAE7B7" modified="2011-01-11" version="1">MRQIREEDHAVVMVDDGQVVAEVGYKSVDDHSLVIDHTFVSEQLRGQKIGKELIDKVVAMAREQHKKVIPACSYALALFKRHQEYSDVWQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED03</accession>
    <name>E3ED03_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Iron-hydroxamate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cbrA3</name>
        <name evidence="3" type="ORF">PPSC2_04390</name>
    </gene>
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        <name type="synonym">Bacillus polymyxa</name>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54872.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17220"/>
    <dbReference type="EnsemblBacteria" id="ADO54872">
        <property type="protein sequence ID" value="ADO54872"/>
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    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168365" evidence="1">
        <location>
            <begin position="24"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="2">
        <location>
            <begin position="41"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54872.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="32947" checksum="BBB44B5B17D7920E" modified="2015-05-27" version="2">MALFLVACMIMLSACGQTADKQASSTKAADSAQTTMSADSRIASMSIHLTNNLLALGITPAGSVIGGDVKDFLPHVKDRLQNTRKLGVVTDPDMEAVLELQPDHIFLDKKYSGTDVAKFEKIAPTEVFDLDEGTWKDQLKKIAAMVKHEAQADTFLKDYDTQRERVKKLIHSKIGDGTVMAVRVTAKEVRVMGMKRPVGPLLYQDLGLKPAKGVEKINKAYQVVSQEVLPDYDADAILVIISKGADAQKVYKQLEGNTVWQGLKAVKQGHVYMLNGQPWLDYSAMGHKIALDNAEQLFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED94</accession>
    <name>E3ED94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Methionine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">metN5</name>
        <name evidence="8" type="ORF">PPSC2_02395</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369091.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15165"/>
    <dbReference type="EnsemblBacteria" id="ADO54451">
        <property type="protein sequence ID" value="ADO54451"/>
        <property type="gene ID" value="PPSC2_02395"/>
    </dbReference>
    <dbReference type="GeneID" id="66574505"/>
    <dbReference type="KEGG" id="ppm:PPSC2_02395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.461"/>
    <dbReference type="eggNOG" id="COG1135">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_3_9"/>
    <dbReference type="OMA" id="VFITHEI"/>
    <dbReference type="OrthoDB" id="1058434at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033232">
        <property type="term" value="F:ABC-type D-methionine transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03258">
        <property type="entry name" value="ABC_MetN_methionine_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041701">
        <property type="entry name" value="MetN_ABC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018449">
        <property type="entry name" value="NIL_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09383">
        <property type="entry name" value="NIL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00930">
        <property type="entry name" value="NIL"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="4 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="2"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="38182" checksum="5A2B3C2453EA0B6D" modified="2011-01-11" version="1">MIELRNVSKTYVRKGLSIQALKNINITVDKGDIFGFIGFSGAGKSTLIRLVNRLEKVTTGEVLVEGESLNAYSTSGLRKVRKKIGMIFQHFNLLESKTVFENIAIPLVLLKRNKREIERRVTELLAFTGLSDKANSYPSELSGGQKQRVGIARALASNPSILLCDEATSALDPQTTQSILDLLRKINKEYKITILIITHEMSVIQRICNKVAVMEKGEIIEQGDVLEVFGQPKHPTTQSFVRTVIHDEVPDSVLQTFEQQESQRIYKLEFIGQAASDPVVHELIRKHDIHVNILFANMTEIQETTIGYMTLQLRGEQQAVQQAVDFIKSKGVHIQEVESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDF4</accession>
    <name>E3EDF4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10">Shikimate kinase</fullName>
            <shortName evidence="10">SK</shortName>
            <ecNumber evidence="3 10">2.7.1.71</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 11" type="primary">aroK</name>
        <name evidence="11" type="ORF">PPSC2_04660</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP + shikimate = 3-phosphoshikimate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13121"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.71"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="10">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 5/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the shikimate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.71" evidence="3 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54933.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025677396.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17555"/>
    <dbReference type="EnsemblBacteria" id="ADO54933">
        <property type="protein sequence ID" value="ADO54933"/>
        <property type="gene ID" value="PPSC2_04660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.936"/>
    <dbReference type="eggNOG" id="COG0703">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057607_4_0_9"/>
    <dbReference type="OrthoDB" id="1392851at2"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00088"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004765">
        <property type="term" value="F:shikimate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00464">
        <property type="entry name" value="SK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00109">
        <property type="entry name" value="Shikimate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031322">
        <property type="entry name" value="Shikimate/glucono_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000623">
        <property type="entry name" value="Shikimate_kinase/TSH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023000">
        <property type="entry name" value="Shikimate_kinase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01202">
        <property type="entry name" value="SKI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01128">
        <property type="entry name" value="SHIKIMATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="21"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54933.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="190" mass="22147" checksum="072E3E3ED580E2BA" modified="2015-05-27" version="2">MQNNSEIPLKEQNIVLIGFMGVGKTTIGSHLARKLYRDFVDIDQEIEQEYNMPTTEIFKTYGEKRFREIEKEHILKLCSNTRLKIISVGGGAFLQEEVKQACLASSIVFFLDLNWDSWKDRLKMLIDTRPNLQNKTLEEIENLFRSRQDIYAVNHSKIDTDQLDAEEVADYIIQTLNLGWELYEPTRGLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDW7</accession>
    <name>E3EDW7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stage V sporulation protein T</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoVT</name>
        <name evidence="3" type="ORF">PPSC2_00220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368681.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13235"/>
    <dbReference type="EnsemblBacteria" id="ADO54033">
        <property type="protein sequence ID" value="ADO54033"/>
        <property type="gene ID" value="PPSC2_00220"/>
    </dbReference>
    <dbReference type="GeneID" id="66574921"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.43"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105826_0_0_9"/>
    <dbReference type="OMA" id="IGEMGAF"/>
    <dbReference type="OrthoDB" id="1942483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014213">
        <property type="entry name" value="SpoVT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF026579">
        <property type="entry name" value="Spore_V_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02851">
        <property type="entry name" value="spore_V_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="2">
        <location>
            <begin position="5"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="19883" checksum="E649243112040A99" modified="2011-01-11" version="1">MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPIGELGDFAKEYAESLFESTGHITMITDRDTIITVAGGSKKEFLDKQIGSIIEGSMDNRKTVLETASGSYELTRDHEETLSSFVTAPIVSGGDPIGSVILLNKDENVKMSEMEVKMAETAAGFLGKQMEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE28</accession>
    <name>E3EE28_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqhC</name>
        <name evidence="2" type="ORF">PPSC2_02750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369148.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0524"/>
    <dbReference type="EnsemblBacteria" id="ADO54508">
        <property type="protein sequence ID" value="ADO54508"/>
        <property type="gene ID" value="PPSC2_02750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.518"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_100_0_9"/>
    <dbReference type="OMA" id="HHFRAMT"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009594">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06719">
        <property type="entry name" value="AraC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="190"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="33420" checksum="E1D46B7145D55797" modified="2011-01-11" version="1">MNQLITELAKQIARHTPKDGLHQTAIPELCFRRASAESKPTHTLNMPSLYIIAQGSKTVTFVGESLMCDSSSYMVASVHLPVIGKITHASPQLPYLSLQLTLSPDVIIDISKKSSSQKKGVTGRGILVNPSTSFLLDAILRLVNLLDSPTDIEILAPLYIREIFYRVLEGEQGALLRQFAVIGSYAQGISNAIHVINRDYSEQLVIEELAKKVNMNPTTFHKHFKRVTGMSPLQYQKIIRLQSARRLMLTEGYDAATAGFQVGYESPSQFNREYARLFGRPPMRDISHLRDIELPSQLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE35</accession>
    <name>E3EE35_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-670</name>
        <name evidence="2" type="ORF">PPSC2_02785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54515.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885866.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15585"/>
    <dbReference type="EnsemblBacteria" id="ADO54515">
        <property type="protein sequence ID" value="ADO54515"/>
        <property type="gene ID" value="PPSC2_02785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.526"/>
    <dbReference type="eggNOG" id="COG1388">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092699_0_0_9"/>
    <dbReference type="OrthoDB" id="1522364at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168164" evidence="1">
        <location>
            <begin position="29"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54515.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="24594" checksum="62944AE23941BC82" modified="2015-05-27" version="2">MNMKNKWLLALSLTLTFVFSMTPVVVSQAKAGEEKGFTCLSPKMVQLKGDMQKVWIDHTIWTRSYIVSAISNRPDQKDVLDRLLRNQQDIGNVIKPYYGEAAGNKLADLLREHILIAGKIVAAAKAGNQADMKKLDADWHANADDIAKFLSEANPNWQFKTLQDMLYTHLQLITEIVLNCLKGDWKADIAATDKNEIHMIHLADILTEGIAKQFPEKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE50</accession>
    <name>E3EE50_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_04850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369606.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54973">
        <property type="protein sequence ID" value="ADO54973"/>
        <property type="gene ID" value="PPSC2_04850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.976"/>
    <dbReference type="eggNOG" id="COG4842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_808542_0_0_9"/>
    <dbReference type="OMA" id="GMERNRF"/>
    <dbReference type="OrthoDB" id="1999616at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036689">
        <property type="entry name" value="ESAT-6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010310">
        <property type="entry name" value="T7SS_ESAT-6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06013">
        <property type="entry name" value="WXG100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140453">
        <property type="entry name" value="SSF140453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03930">
        <property type="entry name" value="WXG100_ESAT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="339" mass="37376" checksum="A4C4A19BDCE2183D" modified="2011-01-11" version="1">MTKIQVTPEQLDNVASQFANAHGILYNQLNGLDSTMNHLHSQWDGMERNRFYNDYRTAKYTLSSILNKVQSIEIELKSIALKFRNADGGSTRGFWSALAAAMNASAALAGSGEGGNHTGDIVDSPQNIDEWEQADADKYHQYEELLKNAETIGDKQVMQKIHDQMNVLRLQYEDSVIRTDYNTGATSKITSDSLVAVTELTGKDGSKTDISIDKKGNIISYEQNTDKYDYWVQKHTQSAGEHALGKTAQTVTGYGMGLILSRGTGVSGAGSGAASGWGEHVVGIGGGMISDKVLFSVPDEGETRTMIYRTNKETGHVENMIIVTKGENEMKYRYWEDYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEJ9</accession>
    <name>E3EEJ9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dacT1</name>
        <name evidence="2" type="ORF">PPSC2_07065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370078.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20045"/>
    <dbReference type="EnsemblBacteria" id="ADO55450">
        <property type="protein sequence ID" value="ADO55450"/>
        <property type="gene ID" value="PPSC2_07065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1458"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_136769_0_0_9"/>
    <dbReference type="OMA" id="NRGITFV"/>
    <dbReference type="OrthoDB" id="2055010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="17319" checksum="1A7E6DE1BE59131B" modified="2011-01-11" version="1">MIRKRCAQDDNMIFRLIEQELVPLSHLSAQEMDQIRKELPRRLNRGITFVACRPDNAQVVGFIHVMLHGELLYIDLIAISSAHQGKRYGKKLLEYAEQYGRLRRCKRAKVMVDEDNVRGIHFYLRHQYHMLRYVALSRCHELEKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEM2</accession>
    <name>E3EEM2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0342 protein PPSC2_08200</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yheA</name>
        <name evidence="2" type="ORF">PPSC2_08200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0342 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370332.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20805"/>
    <dbReference type="EnsemblBacteria" id="ADO55709">
        <property type="protein sequence ID" value="ADO55709"/>
        <property type="gene ID" value="PPSC2_08200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1724"/>
    <dbReference type="eggNOG" id="COG3679">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_140243_2_0_9"/>
    <dbReference type="OMA" id="YDNANEM"/>
    <dbReference type="OrthoDB" id="1880225at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1500.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01526">
        <property type="entry name" value="UPF0342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010368">
        <property type="entry name" value="Com_YlbF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023378">
        <property type="entry name" value="YheA/YmcA-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06133">
        <property type="entry name" value="Com_YlbF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158622">
        <property type="entry name" value="SSF158622"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="13335" checksum="60E73B06E8B509A2" modified="2011-01-11" version="1">MNIYDKAHDLAKALKESKEVEEITSAMKLIETDPEAKKMLDDFRERQMEVQQRMMSGDMPAQEEMEKMEKMFEVLSLNLNIRRLFDAERRLAVIIEDVNKIIADSLQHLYGSSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEU0</accession>
    <name>E3EEU0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Lysine--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Lysyl-tRNA synthetase</fullName>
            <shortName evidence="8">LysRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">lysS</name>
        <name evidence="12" type="ORF">PPSC2_00370</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8 9">
            <text>ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys)</text>
            <dbReference type="Rhea" id="RHEA:20792"/>
            <dbReference type="Rhea" id="RHEA-COMP:9696"/>
            <dbReference type="Rhea" id="RHEA-COMP:9697"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78529"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8 9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8 9">Binds 3 Mg(2+) ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.6" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368709.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13385"/>
    <dbReference type="EnsemblBacteria" id="ADO54063">
        <property type="protein sequence ID" value="ADO54063"/>
        <property type="gene ID" value="PPSC2_00370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.73"/>
    <dbReference type="eggNOG" id="COG1190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008255_6_0_9"/>
    <dbReference type="OMA" id="EIFGEKC"/>
    <dbReference type="OrthoDB" id="63621at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004824">
        <property type="term" value="F:lysine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006430">
        <property type="term" value="P:lysyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00775">
        <property type="entry name" value="LysRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04322">
        <property type="entry name" value="LysRS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00252">
        <property type="entry name" value="Lys_tRNA_synth_class2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002313">
        <property type="entry name" value="Lys-tRNA-ligase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034762">
        <property type="entry name" value="Lys-tRNA-ligase_II_bac/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044136">
        <property type="entry name" value="Lys-tRNA-ligase_II_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018149">
        <property type="entry name" value="Lys-tRNA-synth_II_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039101">
        <property type="entry name" value="LysRS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00982">
        <property type="entry name" value="TRNASYNTHLYS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00499">
        <property type="entry name" value="lysS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 12" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="8 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="11">
        <location>
            <begin position="189"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="7"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="416"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="508" mass="58281" checksum="9C897324125BA41D" modified="2011-01-11" version="1">MSDETTNQELQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTKEELEEKNIEVSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPEANYKAFGILDLGDIVGVKGVLFKTKTGETTIKVLDIEVLSKSLYPLPEKYHGLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHAIAGGAAAKPFVTHHNALDTQLYMRIAIELHLKRLIVGGMEKVYEIGRVYRNEGVSTRHNPEFTLIELYEAYADYKDIMQLTENLIAHIAQEVLGTQHIQYQGQEVDLTPQWRRVSMVDAVKEVTGVDFSAQMSNEEAHRLAKEHKVPVEPHMTFGHILNAFFEHFVEETLIQPTFITGHPVEISPLAKKNEQDPRFTDRFELFVVAREHANAFTELNDPIDQRQRFEAQLLEREHGNDEAHQMDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMRNRTVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF15</accession>
    <name>E3EF15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">M1-689</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">M1-689</name>
        <name evidence="4" type="ORF">PPSC2_02870</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369175.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15685"/>
    <dbReference type="EnsemblBacteria" id="ADO54535">
        <property type="protein sequence ID" value="ADO54535"/>
        <property type="gene ID" value="PPSC2_02870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.546"/>
    <dbReference type="eggNOG" id="ENOG50334DM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056165_0_0_9"/>
    <dbReference type="OMA" id="VEREHNN"/>
    <dbReference type="OrthoDB" id="1612763at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025436">
        <property type="entry name" value="DUF4179"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040680">
        <property type="entry name" value="DUF5643"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13786">
        <property type="entry name" value="DUF4179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18705">
        <property type="entry name" value="DUF5643"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4179" evidence="2">
        <location>
            <begin position="69"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="DUF5643" evidence="3">
        <location>
            <begin position="262"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="421" mass="46886" checksum="2BAFC17E7C956A56" modified="2011-01-11" version="1">MNPSGFENQDQELDEKLQLEKENLEAKMVVIPDLVRQRLDAFYAQMESDPELLPNRPSSHLSVKRFFRGTAITAASAALIGVMIIGSAFVSPTMAESLKQVPLVDSVFKLAGDLGLQTADQKGLATSVNLSVTHSGITLKVPQIIFDGTRLVVALEKSGGDSPHEPLYPTTNTQGQEEDMVEKIDLFINGTSVNSNSSAFNHMYGRPGKDNNSMLIAYMRDPASGKSALPDQFELEVYAKLKGVPEPFRIQTTVHKTKINNKILQPQMSKSNPYLAFTVEKLEITPITTKITTSFKMLTDIAHMPDEYTVEREHNNMKNGHTIQYTKRELDILDYAVFDEQGRELQLLSGSGVPHTQERDSKMITLFTPFVDTPQKIIFKPYILPTQPGGSALLDANGNWPRHYMDELEITIDVPPNTNHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFH4</accession>
    <name>E3EFH4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ma_1747</name>
        <name evidence="7" type="ORF">PPSC2_07125</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370092.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20105"/>
    <dbReference type="EnsemblBacteria" id="ADO55465">
        <property type="protein sequence ID" value="ADO55465"/>
        <property type="gene ID" value="PPSC2_07125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1472"/>
    <dbReference type="eggNOG" id="COG0488">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_36_0_9"/>
    <dbReference type="OMA" id="MYVDQSR"/>
    <dbReference type="OrthoDB" id="1112046at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="5"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="353"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="548"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="89"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="238"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="549"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="385"/>
            <end position="392"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="616" mass="70599" checksum="AF29421439C288BA" modified="2011-01-11" version="1">MKTILRVRNVVKEWNGTSLFENVSLDVTEGERLALFGRNGAGKTTLLRILLGDEAPTSGQVEHDLPLEERGWLKQQDTVNWSRTALEVAQQASTQHWDLKQELGQLEADLANAGKDMEQQLERYGELMDEYERLQGFAWESEVEKALTRMGMPAQTWSIAYGDLSGGQKTRVRLAGLMVRQPKLLVLDEPTNHLDAESMLWLEQWLSSYPGTLLFVSHDRAFLDQVATSIVELTSTGIERYKGGYKEYKAQKERELREQEASYRKQELARQALEETIRNYREWFHQAHRSASKVEMAITQSFYKAKAKKNISRYHAKEKELERLEANRVEQPRGAPSLHMKLNDSGFQAKYLLRTEQVDFSYDDHVIVKNLNLNVARGDRLAVRGPNGIGKTTLLRLLTGQLEPKTGKITANPQLNIGYFSQELEQLPEDQTLLDSLLALPTMTQTEARTVLGCFLFAKEDVFKRIGTLSMGEKCRVAFLRLYFSGANLLVLDEPTNYFDIETREIVEDSLRRYNGALVLVSHDRELVRCTATRLLDMQPGGGYEIYEGTADEKQEDERRSIREPKDQGEREERLRLQLRLTELMGMTGMSEANEELLSDIRRIRAKMDQLNDPDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFY4</accession>
    <name>E3EFY4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L32</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">rpmF</name>
        <name evidence="5" type="ORF">PPSC2_09650</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial ribosomal protein bL32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370634.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22115"/>
    <dbReference type="EnsemblBacteria" id="ADO56017">
        <property type="protein sequence ID" value="ADO56017"/>
        <property type="gene ID" value="PPSC2_09650"/>
    </dbReference>
    <dbReference type="GeneID" id="66578008"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2034"/>
    <dbReference type="eggNOG" id="COG0333">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_129084_1_3_9"/>
    <dbReference type="OMA" id="HRACRHC"/>
    <dbReference type="OrthoDB" id="2092354at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00340">
        <property type="entry name" value="Ribosomal_L32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002677">
        <property type="entry name" value="Ribosomal_L32p"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044957">
        <property type="entry name" value="Ribosomal_L32p_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35534">
        <property type="entry name" value="PTHR35534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01783">
        <property type="entry name" value="Ribosomal_L32p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01031">
        <property type="entry name" value="rpmF_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="57" mass="6599" checksum="25E447685C36A653" modified="2011-01-11" version="1">MAVPQRRTSKTRRDKRRTHFKLEVPGMVKCSECGELKLAHHVCKVCGTYKAREIISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG03</accession>
    <name>E3EG03_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6 7">50S ribosomal protein L19</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">rplS</name>
        <name evidence="8" type="ORF">PPSC2_09740</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6 7">This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6 7">Belongs to the bacterial ribosomal protein bL19 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429998.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22205"/>
    <dbReference type="EnsemblBacteria" id="ADO56036">
        <property type="protein sequence ID" value="ADO56036"/>
        <property type="gene ID" value="PPSC2_09740"/>
    </dbReference>
    <dbReference type="GeneID" id="66577990"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2052"/>
    <dbReference type="eggNOG" id="COG0335">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_103507_2_1_9"/>
    <dbReference type="OMA" id="TITVYYE"/>
    <dbReference type="OrthoDB" id="1698718at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00402">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038657">
        <property type="entry name" value="L19_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001857">
        <property type="entry name" value="Ribosomal_L19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018257">
        <property type="entry name" value="Ribosomal_L19_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15680">
        <property type="entry name" value="PTHR15680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01245">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002191">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00061">
        <property type="entry name" value="RIBOSOMALL19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01024">
        <property type="entry name" value="rplS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01015">
        <property type="entry name" value="RIBOSOMAL_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 8" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="13239" checksum="393706C9495939DF" modified="2011-01-11" version="1">MNIVQAITEEQLRKDLPNFRPGDTLKVHVKVIEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPLHSPKIDKIEVARRGKVRRAKLYYLRELRGKAARIKEIRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG71</accession>
    <name>E3EG71_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Protein lplB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">lplB5</name>
        <name evidence="8" type="ORF">PPSC2_10770</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370870.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23165"/>
    <dbReference type="EnsemblBacteria" id="ADO56264">
        <property type="protein sequence ID" value="ADO56264"/>
        <property type="gene ID" value="PPSC2_10770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2281"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="OMA" id="AEPKYFW"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
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    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
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    </dbReference>
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        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="44"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="147"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="237"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="296"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="101"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="37076" checksum="111654CA4EBF8937" modified="2011-01-11" version="1">MSTGWKNPQPQPQPQPQPQPQPSVRSGRWTSLARRWGGQKHLQTMALLGVVWMIIFHYIPMYGILIAFKHFDIIGTISSAPWAGLEHFRAFLEDDNFWYIVKNTLGISLLKLAIGFPLPIVFALFLNEIRSTRFKKSIQTISYLPHFLSWVILGGILTTWLADTGLINQLLLAWGWIDQPISYLAEPGYFWTIVVSSDIWKELGWSAIIYLAAMAGVSTDMYEAATIDGAGRFQKMWYVTLPAIKGTISILFILAVSGILNSNFDQILVLRNSLNESASNVVDIYVYQVGIQQGRFSYSTAVGLLKSVLALILLLIANSVTKRMNNTSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG93</accession>
    <name>E3EG93_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Deoxycytidine triphosphate deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">dcd</name>
        <name evidence="1" type="ORF">PPSC2_12265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2613"/>
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        <property type="protein sequence ID" value="ADO56583"/>
        <property type="gene ID" value="PPSC2_12265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2599"/>
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2524432_0_0_9"/>
    <dbReference type="OrthoDB" id="1598407at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036157">
        <property type="entry name" value="dUTPase-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51283">
        <property type="entry name" value="SSF51283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9528" checksum="6B39D38BFBFAA50B" modified="2011-01-11" version="1">MILSDRTLRTLIRQKRMTVSPLTEEQIQPASIDSEETLIPPLSFMLATTIETIRLPGYITAFVEGRISIGRMSLFMKRSDPTCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGN0</accession>
    <name>E3EGN0_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Microcystin-dependent protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="3" type="primary">mdpB</name>
        <name evidence="3" type="ORF">PPSC2_03475</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0686"/>
    <dbReference type="EnsemblBacteria" id="ADO54669">
        <property type="protein sequence ID" value="ADO54669"/>
        <property type="gene ID" value="PPSC2_03475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.678"/>
    <dbReference type="eggNOG" id="COG4675">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_170308_0_0_9"/>
    <dbReference type="OMA" id="NYYIATE"/>
    <dbReference type="OrthoDB" id="1837650at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011083">
        <property type="entry name" value="Phage_tail_collar_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037053">
        <property type="entry name" value="Phage_tail_collar_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07484">
        <property type="entry name" value="Collar"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168935" evidence="1">
        <location>
            <begin position="33"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="Collar" evidence="2">
        <location>
            <begin position="39"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12232" checksum="C71FABD9E601AB93" modified="2011-01-11" version="1">MKNHFLKKTAVLSLLAVILLGGTAISPKQAQASPEPYIGEITMYPYTYAPKGWIKCEGQLLDISQNSVLFSLLGTNFGGDGVRTFALPDLRGASPLPNVNYYIATEGPYPSRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH16</accession>
    <name>E3EH16_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370203.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1599"/>
    <dbReference type="EnsemblBacteria" id="ADO55576">
        <property type="protein sequence ID" value="ADO55576"/>
        <property type="gene ID" value="PPSC2_07635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1580"/>
    <dbReference type="eggNOG" id="ENOG50309JP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_158665_0_0_9"/>
    <dbReference type="OMA" id="ECAIALW"/>
    <dbReference type="OrthoDB" id="1903755at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="134" mass="15689" checksum="D034A393565E58A4" modified="2011-01-11" version="1">MKTDKINDTYYAGFEGEPEIRVIYINSDESYALKIWNGYFETLLGCLIQIESVQSNILSEYDAHEGWYEESRWEVKNIRETLHLFDSFDIKNLTEEEAKSLTNILPVLPCLKDNIIILLQKAINRNGNVFIEYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH57</accession>
    <name>E3EH57_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">N-6 DNA methylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ypsC</name>
        <name evidence="4" type="ORF">PPSC2_08850</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370466.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21315"/>
    <dbReference type="EnsemblBacteria" id="ADO55848">
        <property type="protein sequence ID" value="ADO55848"/>
        <property type="gene ID" value="PPSC2_08850"/>
    </dbReference>
    <dbReference type="GeneID" id="66578169"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1866"/>
    <dbReference type="eggNOG" id="COG0116">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032119_3_1_9"/>
    <dbReference type="OMA" id="GFMYKAN"/>
    <dbReference type="OrthoDB" id="1772619at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034470">
        <property type="term" value="P:ncRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001510">
        <property type="term" value="P:RNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
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        <property type="entry name" value="RNA_methylase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004114">
        <property type="entry name" value="THUMP_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02926">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01170">
        <property type="entry name" value="UPF0020"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00981">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51165">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="THUMP" evidence="3">
        <location>
            <begin position="45"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="43569" checksum="15F052F1136F0B65" modified="2011-01-11" version="1">MTQLQLIATAPMGLEAVVARELRELGYTDLTVENGRVVFSGDYKDICRCNLWLRTSDRVLIKMGEFAATTFDELFEGTKALPWQDWIPVDGEFPVEGRSHKSQLSSVPASQGIVKKAIVEKLKETYHTDWFAEDGPRYVIEVILLNDRALITLDTTGPGLHKRGYRKLVTEAPLKETMASALIQLSRWSPDRPFYDPCCGSGTLLVEAAMQAWNIAPGLRRTFNSEDWPVIGRELWNQARDEAMDLTRDDIPFEIAGSDIDPSAIQVAEAAVKAAGFAKDISLKVLPASKVRLEGQYGVMITNPPYGERLSEQAEVEKLIRTLARTAAEMKTWSFFAISSTKQFEHYWGRKADKRRKLFNGRIECQYYQYLGPLPPRRKDTSPLQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH64</accession>
    <name>E3EH64_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycerophosphodiester phosphodiesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glpQ</name>
        <name evidence="2" type="ORF">PPSC2_08885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55855.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21350"/>
    <dbReference type="EnsemblBacteria" id="ADO55855">
        <property type="protein sequence ID" value="ADO55855"/>
        <property type="gene ID" value="PPSC2_08885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1873"/>
    <dbReference type="eggNOG" id="COG0584">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030006_3_2_9"/>
    <dbReference type="OrthoDB" id="1542724at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008081">
        <property type="term" value="F:phosphoric diester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
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        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="SSF51695"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GP-PDE" evidence="1">
        <location>
            <begin position="3"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55855.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="256" mass="29423" checksum="A59165078777DC2D" modified="2015-05-27" version="2">MDHLCVAHRGFSGIAPENTIAAFKLALEQPFVHWIELDVQLSKDGVPVVFHDFTLERTTNGTGRVKDADWKQLQRLDAGSWKNAQYYGEPIPSLAQVLDLCQGRVSLNIELKTAGDMYPGLEKAVLREIIMRGMEAEVVLTSFERAALRRAKELAPEIRTGLIIDARPDDLAKQLENLQCSFLSIGYPRIDRKLLKDLIGRGITVMAWTVDDRRIMRRLSSLHPELMICTNWPDRWEQVFLLSKSRMWHYIRKLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH89</accession>
    <name>E3EH89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yugP</name>
        <name evidence="2" type="ORF">PPSC2_09010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21475"/>
    <dbReference type="EnsemblBacteria" id="ADO55880">
        <property type="protein sequence ID" value="ADO55880"/>
        <property type="gene ID" value="PPSC2_09010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1898"/>
    <dbReference type="eggNOG" id="COG2738">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084406_0_0_9"/>
    <dbReference type="OMA" id="VQHATAY"/>
    <dbReference type="OrthoDB" id="1656873at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007395">
        <property type="entry name" value="Zn_peptidase_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36434">
        <property type="entry name" value="PTHR36434"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04298">
        <property type="entry name" value="Zn_peptidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="223" mass="24758" checksum="DD2E913C7079360D" modified="2011-01-11" version="1">MMGMYILIILAFGLSLWAQFRVKGTFNKWSDVPNENGLTGYDAARHMLDRNGLHDVPIEPVPGALSDHYDPIQRVVRLSEPVYYEKSISAVAVACHEVGHAIQHKEHYPMLALRHRIFPIVNFASGIAPFLLIAGFLFSFTNLIGLGIIFFSATVAFQLITLPVEFNASNRAREIMVSEGFIRSDEERGVAKVLNAAALTYVAAALVSLLELIRLIGIFNSRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHL1</accession>
    <name>E3EHL1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">msbA7</name>
        <name evidence="10" type="ORF">PPSC2_10340</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370771.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22810"/>
    <dbReference type="EnsemblBacteria" id="ADO56164">
        <property type="protein sequence ID" value="ADO56164"/>
        <property type="gene ID" value="PPSC2_10340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2178"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="RYFEVMD"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="128"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="159"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="281"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="21"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="337"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="371"/>
            <end position="378"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="585" mass="65503" checksum="3F10077EE95A3229" modified="2011-01-11" version="1">MFSVLKNLGWFFKRERSRYSIGLFLLIAVGVLELAPPRLLGSAIDEIVRGSISWSSLWRYILYIIGILAVIYYITYIWMHKLFGGANLVERLLRTRFMNHLLRMTPPFFERNRTGDLMARATNDLRSVASTAGFGMLTLTDSTVYLTVVLVAMGTLISWKLTLAAILPLPFIALAMSIYGKAVHERYTLAQDAFGDMNDQVLESVAGIRVIRAYVQERMDEKRFADITEDVFRKNLAVARMDALFEPTIRLCVGLSYVIGLGYGIYLVFHNDITLGELVSFNMYLGMMIWPMFAIGELINIMQRGSASLDRVNETLDVQPDVQNVAQPVPVDRPESITMKDVTFRYPTSTVDNLSHVNLELKRGETLGVVGRTGSGKSTLLKQLLHEYPTGSGDILISDTRLEDIAVEQLHSWIGYVPQEQILFSKSVRENIQFGKPGADDDDIMEAIRTAAFDQDLGTLSDGLDTLVGEKGIALSGGQKQRVSLARAFIGDPDILVLDDALSAVDARTEARIIDNIRHKRSGKTTLISTHRLSAVEHADRIVVLEQGRIIEEGTHNELLQADGWYRQQYERQQVESDLTSGEVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHM2</accession>
    <name>E3EHM2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transport permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">PDR1</name>
        <name evidence="8" type="ORF">PPSC2_10865</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-2 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370890.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2312"/>
    <dbReference type="EnsemblBacteria" id="ADO56284">
        <property type="protein sequence ID" value="ADO56284"/>
        <property type="gene ID" value="PPSC2_10865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2301"/>
    <dbReference type="eggNOG" id="COG0842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039483_2_0_9"/>
    <dbReference type="OMA" id="VMITMYT"/>
    <dbReference type="OrthoDB" id="1891092at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006648">
        <property type="entry name" value="DrrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="118"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="153"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="190"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="245"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="7">
        <location>
            <begin position="28"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="29377" checksum="50556F75BB6154FC" modified="2011-01-11" version="1">MKNATAMTASHRTLKKSVSFKQAFANSMTMAYRGILKIRHTPEQLFDVTLQPIIFTLMFTYIFGGAISGDVQHYLPVIIPGILVQTVISTSVVTGVQLREDMDKGVFDRFKSLPIARIAPLAGALLADSLRYTIATVLTFAMGYILGYQPEGGLLSVAIAALLVIVCSWAVSWIFAFFGVIARTASSVQGISMIVLFPLTFISNAFVPVDTMPGWLQWFVNVNPISHLVNAVRELANTGMIGGELAISLLGAAVIVAIFAPLTVRAYMRKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI23</accession>
    <name>E3EI23_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Zn-dependent protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">M1-843</name>
        <name evidence="9" type="ORF">PPSC2_03580</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M50B family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369327.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16390"/>
    <dbReference type="EnsemblBacteria" id="ADO54691">
        <property type="protein sequence ID" value="ADO54691"/>
        <property type="gene ID" value="PPSC2_03580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.701"/>
    <dbReference type="eggNOG" id="COG1994">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065992_0_0_9"/>
    <dbReference type="OMA" id="AVTRWLW"/>
    <dbReference type="OrthoDB" id="1401629at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008915">
        <property type="entry name" value="Peptidase_M50"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02163">
        <property type="entry name" value="Peptidase_M50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="17"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="87"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="117"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="144"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="178"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="333"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M50" evidence="8">
        <location>
            <begin position="132"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="362" mass="40546" checksum="03F5F973E2F20AD0" modified="2011-01-11" version="1">MQKEDNKTDSKSGSSKWYLGSAAALLLLKGKSLLALLKFSKFGGALISMAFTIGTYAIIYPWGFAVGFVLLLFVHELGHVLAAKRKGLPVSTPLFIPFLGALITMKRHPLDAQTEAYVAMGGPLLGTVGAMAVYAGAYATDSPLLYALAYIGFFLNLINLLPIHPLDGGRISTAVTRWLWLVGLLGGIVVIVYLKSILFFFIWALFAYDLYKKYVKRNKKDVKVQSLLQKPLVDVQHLYEQGYPLPGPEHTRRLSFNTYSDLEGQQYVTVYMESLDVEHTLLLPQQCLVQHVWLNGVEHIPTPDAYQLRLLCGIDYIPFENDKYYEVPAASRWKFGIGYLGLALFLMGMMYVVHQHIGDIRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI78</accession>
    <name>E3EI78_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yurK</name>
        <name evidence="2" type="ORF">PPSC2_03820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369382.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16635"/>
    <dbReference type="EnsemblBacteria" id="ADO54746">
        <property type="protein sequence ID" value="ADO54746"/>
        <property type="gene ID" value="PPSC2_03820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.756"/>
    <dbReference type="eggNOG" id="COG2188">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063236_8_2_9"/>
    <dbReference type="OMA" id="PMLLLHR"/>
    <dbReference type="OrthoDB" id="1775418at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="27042" checksum="1AF51994BAF0B636" modified="2011-01-11" version="1">MLNSDQAEPLYIQLQKAVKTAIHNGTFTQGSRIPTETELSEMYNVSRITVRKAIAELVHEGYLTKRQGKGTFVNIPKIGRKIEHVISFTAACKSNGLSSHSEVTKREIIAADEEIAHQLQLSPGEKVLFIQRKRYADDRPLMLENNFYPYERFAFLMHEQLEGSVYELLRQKYSIDPNQPGETILQIALADENQAKLLETAIGQALFYMHTIIYDQHGSPVHVGKQYIIGDRYQFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EID1</accession>
    <name>E3EID1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Cyclic pyranopterin monophosphate synthase</fullName>
            <ecNumber evidence="3 5">4.6.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Molybdenum cofactor biosynthesis protein C</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">moaC</name>
        <name evidence="8" type="ORF">PPSC2_06100</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:49580"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:59648"/>
            <dbReference type="ChEBI" id="CHEBI:131766"/>
            <dbReference type="EC" id="4.6.1.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homohexamer; trimer of dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the MoaC family.</text>
    </comment>
    <dbReference type="EC" id="4.6.1.17" evidence="3 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369876.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19065"/>
    <dbReference type="EnsemblBacteria" id="ADO55244">
        <property type="protein sequence ID" value="ADO55244"/>
        <property type="gene ID" value="PPSC2_06100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1251"/>
    <dbReference type="eggNOG" id="COG0315">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074693_1_1_9"/>
    <dbReference type="OMA" id="IWDMVKS"/>
    <dbReference type="OrthoDB" id="1595361at2"/>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061799">
        <property type="term" value="F:cyclic pyranopterin monophosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01420">
        <property type="entry name" value="MoaC_PE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.640">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01224_B">
        <property type="entry name" value="MoaC_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023045">
        <property type="entry name" value="Mo_CF_biosynth-C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036522">
        <property type="entry name" value="MoaC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002820">
        <property type="entry name" value="Mopterin_CF_biosynth-C_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01967">
        <property type="entry name" value="MoaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55040">
        <property type="entry name" value="SSF55040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00581">
        <property type="entry name" value="moaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 5" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoaC" evidence="7">
        <location>
            <begin position="15"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="75"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="112"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="143"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="17322" checksum="5094B545CFB439D4" modified="2011-01-11" version="1">MDSFTHFNEQGRARMVDISGKTSTVRTAVAVTQITMNPATLTAVKEGRIGKGDVLAVAQVAGIQGAKKTSDWIPMCHPLALTGVNITFSDNGHDVLHIEVEVKTEGKTGVEMEALTAASAAALTVYDMCKALQKDMIIGPTMLQSKTGGKHGDFQREDHQKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIN0</accession>
    <name>E3EIN0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrogen fixation protein NifU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nifU1</name>
        <name evidence="2" type="ORF">PPSC2_07995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370293.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20690"/>
    <dbReference type="EnsemblBacteria" id="ADO55668">
        <property type="protein sequence ID" value="ADO55668"/>
        <property type="gene ID" value="PPSC2_07995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1681"/>
    <dbReference type="eggNOG" id="COG0822">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079283_4_0_9"/>
    <dbReference type="OMA" id="MKLDSMY"/>
    <dbReference type="OrthoDB" id="1793654at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06664">
        <property type="entry name" value="IscU_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002871">
        <property type="entry name" value="NIF_FeS_clus_asmbl_NifU_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10093">
        <property type="entry name" value="PTHR10093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01592">
        <property type="entry name" value="NifU_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NifU_N" evidence="1">
        <location>
            <begin position="7"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="15692" checksum="9BC0EBA6B38B6949" modified="2011-01-11" version="1">MQLDDLYRRVIMDHYKNPRNRGRFEDDAVTVDLNNPTCGDRISLQLKTKDGLVEDARFTGEGCSISMSSASMMTEAVKGKTIDQALDMASRFSSLMKGEAVEFDDYEELEALSGVNKFPARIKCATLAWNALRKGIDEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ28</accession>
    <name>E3EJ28_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein tolB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tolB</name>
        <name evidence="2" type="ORF">PPSC2_10540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370815.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2237"/>
    <dbReference type="EnsemblBacteria" id="ADO56209">
        <property type="protein sequence ID" value="ADO56209"/>
        <property type="gene ID" value="PPSC2_10540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2226"/>
    <dbReference type="eggNOG" id="COG0823">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_946091_0_0_9"/>
    <dbReference type="OrthoDB" id="1821669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169280" evidence="1">
        <location>
            <begin position="27"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="32412" checksum="53D1B9034E61F072" modified="2011-01-11" version="1">MKSAQIMTVGAIMVLAISGCSGNASSNQQLPQNEVKNIEVNNTKEGVKEVEEKVTIETSKATDKKMNSVDYSQYYNNQDKFKVVVSGKQIVWKTKDVTFTAKLTKAKGEEAAEANEVVDSMKIKSKRGEQLIKLNPRPLRVNSLSLSKNNQVALHVSDHEGSRLVLINLSEGAQTIVNMFEMNSDGAGSEKIDAYNWSPDGKKIAFGIGDLGSSYIGVYDVERKSYTHVSDKDFTLISSIVWHKDGKSFDFVSKGDDSPQAILYTYSETKKSILESGALSKNDEQKLAELTSEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJK7</accession>
    <name>E3EJK7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Dioxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">uxuB</name>
        <name evidence="4" type="ORF">PPSC2_12165</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-mannitol 1-phosphate + NAD(+) = beta-D-fructose 6-phosphate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:19661"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:61381"/>
            <dbReference type="EC" id="1.1.1.17"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371161.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EJK7"/>
    <dbReference type="STRING" id="1406.LK13_24520"/>
    <dbReference type="EnsemblBacteria" id="ADO56557">
        <property type="protein sequence ID" value="ADO56557"/>
        <property type="gene ID" value="PPSC2_12165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2572"/>
    <dbReference type="eggNOG" id="COG0246">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037833_0_0_9"/>
    <dbReference type="OMA" id="YKPYDNL"/>
    <dbReference type="OrthoDB" id="1442117at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013118">
        <property type="entry name" value="Mannitol_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013131">
        <property type="entry name" value="Mannitol_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01232">
        <property type="entry name" value="Mannitol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08125">
        <property type="entry name" value="Mannitol_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mannitol_dh" evidence="2">
        <location>
            <begin position="39"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="Mannitol_dh_C" evidence="3">
        <location>
            <begin position="239"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="535" mass="60012" checksum="D593BBDB125CCBFE" modified="2011-01-11" version="1">MLQLNRKSLLDRTAWEAAGIELPKYDLELVAHNTRVRPQWVHFGAGNIFRGFVANAQQQLLNSLKADTGIIAAEAFDFEMIDKTYKPYDNLTLLVLMSADGKFHKSMIASVVESLVAEKNRPDDYLRLIEIFENPTLQMASYTVTEKGYVLTGPDGKYLAVVERDLANGPEQPVHVMSIATSLVYQRYLKGQLPMTFVSMDNCSHNGDLLMDSMITIAKEWNHRGLVENGFVDYLQNEEKITFPLTMIDKITPRPSLQVQSALRELGLVDMEMIVTTRHTYTAPFVNAEVSEYLVIEDKFTNGRPALEEAGIIFTDRDTVNKVEKMKVTTCLNPLHTALALSGCLLGYQLIADEMKDHTLRRLVETIGYKEGLPVVVDPGIIQPKAFIDEVLQERFANPYIPDAPQRIATDTSQKMSIRFGETIKSYVSTAGLDPANLTAIPLTIAIWCRYLLGLDDQGAPFTLSPDPLLDTLQGYLQNTKLGDQTSEIRYLLEDEKLFGVRLYEIGLGDKIEAMFHEMLAGPGAVRSTIEKYVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJM5</accession>
    <name>E3EJM5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7 8">Elongation factor Tu</fullName>
            <shortName evidence="7">EF-Tu</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tuf</name>
        <name evidence="10" type="ORF">PPSC2_28070</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="10 11">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
            <plasmid evidence="10 11">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385812.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0001"/>
    <dbReference type="EnsemblBacteria" id="ADO59396">
        <property type="protein sequence ID" value="ADO59396"/>
        <property type="gene ID" value="PPSC2_28070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5951"/>
    <dbReference type="eggNOG" id="COG0050">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007265_0_1_9"/>
    <dbReference type="OMA" id="EGDKEWG"/>
    <dbReference type="OrthoDB" id="621774at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01884">
        <property type="entry name" value="EF_Tu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03697">
        <property type="entry name" value="EFTU_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00118_B">
        <property type="entry name" value="EF_Tu_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041709">
        <property type="entry name" value="EF-Tu_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033720">
        <property type="entry name" value="EFTU_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004541">
        <property type="entry name" value="Transl_elong_EFTu/EF1A_bac/org"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004160">
        <property type="entry name" value="Transl_elong_EFTu/EF1A_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03143">
        <property type="entry name" value="GTP_EFTU_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="SSF50465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00485">
        <property type="entry name" value="EF-Tu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7 10" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="9">
        <location>
            <begin position="10"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="19"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="81"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="136"/>
            <end position="139"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO59396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="396" mass="43345" checksum="6B36FB28CBDD1267" modified="2011-01-11" version="1">MAKAKFERNKPHVNIGTIGHVDHGKTTLTAAITTVLSKTYGGAAVAFDQIDKAPEERERGITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVEDEELLELVEMEVRDLLSEYDFPGDDTPITRGSAREALQNPDGEWAKKIVEMFETIDTYIPTPERDTDKPFLMPVEDVFSITGRGTVATGRVERGTVKVGDEIEIIGIQEESRKSVVTGVEMFRKLLDSAQAGDNIGALLRGVDRAQIERGQVLAKPGSVNPHTEFSAQIYVLTKEEGGRHKPFFTGYRPQFYFRTTDVTGIITLPEGSEMVMPGDNITVTVQLISPIAIEEGTKFSIREGGRTVGAGAVATISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJX8</accession>
    <name>E3EJX8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386411.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0608"/>
    <dbReference type="EnsemblBacteria" id="ADO59997">
        <property type="protein sequence ID" value="ADO59997"/>
        <property type="gene ID" value="PPSC2_28200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5980"/>
    <dbReference type="HOGENOM" id="CLU_857496_0_0_9"/>
    <dbReference type="OrthoDB" id="2230714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="37291" checksum="225517BA28BEEA0A" modified="2011-01-11" version="1">MSSLGRASSNSKNTKANKLKRMDASHKAFLIEDELVRRINQLSILIPDLVVQGKTDEHMIATHRRNELEDLKDWIQGEIFGSNTLGTRCPLKIWDILKYGEHGEIYRATNTVDTWNGCEVQLTQTHDRDTNLILIIAKSPKVQNHSVNVGNIVKLVGAVTRADWIYVGKREIVKRSNRDALFSMVIEMARVLDYLLDNNIYMGRNPDSAIRLGLVKVMEDAVDAIEKYPGGFVKNVELALEDSCPGEEKFEIYKDELQRVKQEILYLDDDQLAEKIEEIISLTYYFYQNWWGILEWDRRIDVSITEEDMLKIATLKLQIGSTNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJY0</accession>
    <name>E3EJY0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386413.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0610"/>
    <dbReference type="EnsemblBacteria" id="ADO59999">
        <property type="protein sequence ID" value="ADO59999"/>
        <property type="gene ID" value="PPSC2_28185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5977"/>
    <dbReference type="HOGENOM" id="CLU_986392_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="282" mass="33997" checksum="671F7D5EA5832180" modified="2011-01-11" version="1">MKERGKVLSPTLFLEAIEGAKKDLELQCEFLKQAIQNPKLLFQQADSNLGLKSIIFHIMNGFLFHDDKLLAHDFQVLLANVINRFVQEWASQKGIHEKITVRVRNEKKYPSIFAIYVEDMELIQFSLYEKFYGIRNKVFDENAIQLEYEYREEQVNKNVELMLTMVQKYEKVLAHPHQYVRDYYQNKWMNNDKLNMAWKLPFLELREHFSLLLKKENVMIRVQEKLESTQARIESERKSLLRYPAIQDCIQKNHLREELTRKLMPLFEECGYRMETEQYRLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK24</accession>
    <name>E3EK24_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386147.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0342"/>
    <dbReference type="EnsemblBacteria" id="ADO59733">
        <property type="protein sequence ID" value="ADO59733"/>
        <property type="gene ID" value="PPSC2_26515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5591"/>
    <dbReference type="HOGENOM" id="CLU_1738731_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="17332" checksum="9623E17B723F8817" modified="2011-01-11" version="1">MDKKTDFIRLIIEDVFYGYFTKGILSNGQTICMFFIQQRTYQDLEFSVFLAIANKKKHIREWMLGTRDVLSDKSTGKCGLEGLIWGKTMLNAFEKKLEMEYPNGKEQGKVAIVICPTDSRRKKVYVHGLKKNGYAIANRWGCPCLYKKIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKX2</accession>
    <name>E3EKX2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386291.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0488"/>
    <dbReference type="EnsemblBacteria" id="ADO59877">
        <property type="protein sequence ID" value="ADO59877"/>
        <property type="gene ID" value="PPSC2_25785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5423"/>
    <dbReference type="HOGENOM" id="CLU_2247365_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="104" mass="11776" checksum="6DE7D2033C19F407" modified="2011-01-11" version="1">MTNHKTPLDVKIGIVFGHIAILTIFSLLFWKLAIQDYQVKDNIDKAIESHFGDYEIVAENNDHGIHTYVIESNGSITKVVFKENQTWKSITAELVSMNKLPSSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-02-26" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL10</accession>
    <name>E3EL10_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59572.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0179"/>
    <dbReference type="EnsemblBacteria" id="ADO59572">
        <property type="protein sequence ID" value="ADO59572"/>
        <property type="gene ID" value="PPSC2_27235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5764"/>
    <dbReference type="HOGENOM" id="CLU_1538577_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59572.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="174" mass="20463" checksum="E91964747A66B4D8" modified="2015-05-27" version="2">MNVLIEMNKALEIENKALVAENERLKQTLSWSYEQKTIINAFSSLANLNFDYIGDLFQENEIEKVEIHSFMRFGEADECFVGLRYGVKMFGINREGCKQEYLSIPVFEIGDGCFYNQRANARRLNTYTFTRHMADYIESEVLRGCARREYTITIKRTESKIDDLLYFKKEQVET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL13</accession>
    <name>E3EL13_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385989.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0182"/>
    <dbReference type="EnsemblBacteria" id="ADO59575">
        <property type="protein sequence ID" value="ADO59575"/>
        <property type="gene ID" value="PPSC2_27220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5760"/>
    <dbReference type="eggNOG" id="ENOG50348XU">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_095232_0_0_9"/>
    <dbReference type="OMA" id="ITKWENW"/>
    <dbReference type="OrthoDB" id="1336204at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="29295" checksum="A1DF532297BEFF9C" modified="2011-01-11" version="1">MKNQEKVILNPDQKVVALKSTKELFFAAKQLHDWITEDNLSKKMGGILPSLIESHFTDVAKVLDYNSKLTMEQEERYQEIRRANERIHELEKQLGEQKPIDGLAEQLEYLSRVVSDWWNEYGFHHVSEASFTRSGIYKAKFSFMLEYLSTFSKTPVTDKENRKERIQELIEEGWDILHEENGYSPKLVDNDNNRSRLINLIKSRFPSAKIIRTGNWLTDDDNAFTFRDIEVYIYDLHDIITAQVEEEQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL71</accession>
    <name>E3EL71_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386047.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0241"/>
    <dbReference type="EnsemblBacteria" id="ADO59633">
        <property type="protein sequence ID" value="ADO59633"/>
        <property type="gene ID" value="PPSC2_26970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5702"/>
    <dbReference type="HOGENOM" id="CLU_2370208_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="95" mass="11036" checksum="4232B5AEB8D1BD06" modified="2011-01-11" version="1">MDIGKINLNGINYLKESDVDKFYTRKDHVVIDEMVLEKTLLKLEPSELVRILTSVAEDKLREVNYAELSEMMKPENKEEYAINMLLMISNVGQMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC72</accession>
    <name>A0A0D5ZC72_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44243">
        <property type="protein sequence ID" value="AKA44243"/>
        <property type="gene ID" value="PPSC2_12360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2622"/>
    <dbReference type="HOGENOM" id="CLU_2509593_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="9834" checksum="F848BD09DF192F1B" modified="2015-05-27" version="1">MHHGTTNELDILSNTMIWKRKDIGLSILRRFVAGIADIILTSLIKLLGLHWRLFVIENACILTVKYLNEKAVTQPQHHLLLRNHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCA2</accession>
    <name>A0A0D5ZCA2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599590.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1616"/>
    <dbReference type="EnsemblBacteria" id="AKA44204">
        <property type="protein sequence ID" value="AKA44204"/>
        <property type="gene ID" value="PPSC2_07705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1598"/>
    <dbReference type="eggNOG" id="ENOG50307GE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1968391_0_0_9"/>
    <dbReference type="OrthoDB" id="2191403at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5002300215" evidence="1">
        <location>
            <begin position="29"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="14563" checksum="B6AC29AF434417CB" modified="2015-05-27" version="1">MTEVFMRLICLVLLIILASCSNVTDSLTQEVSTEYENVQELNNLPLPSTAIKVDGKYNKYFKIYEVSQPFENFNAAYQKELKDEGWEITEVESNKVISVEKNNIKYLLIITISSDNQTTKVTVRKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4A4</accession>
    <name>E3E4A4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gluconolaconase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">mrjp</name>
        <name evidence="1" type="ORF">PPSC2_12565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56644.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2675"/>
    <dbReference type="EnsemblBacteria" id="ADO56644">
        <property type="protein sequence ID" value="ADO56644"/>
        <property type="gene ID" value="PPSC2_12565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2667"/>
    <dbReference type="eggNOG" id="COG3386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031076_0_3_9"/>
    <dbReference type="OrthoDB" id="966287at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017996">
        <property type="entry name" value="Royal_jelly/protein_yellow"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10009">
        <property type="entry name" value="PTHR10009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03022">
        <property type="entry name" value="MRJP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56644.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="370" mass="41231" checksum="FB511814473D7EDE" modified="2015-05-27" version="2">MVGRILKKTMLPMEEYFGKLELVYSFYGAMPTGVSVSETGRIFICFPKWGDDVRFTVAEIVEGQLQPYPNLETNLINPLNIAMSFISVQSVVADGRGTLWVLDTAAPNFSEPIKGGAKLVAVDLETNTIRKVYTFADDVVLPTTYLNDVRFDFRVGKAGYAYITDSSSNGPGAIIVVNLENGNAYRRLHGASSTSPDPYFVPKVEGKILMNRNADGSTSPFRLASDGIAISPDGKMLFYCPLTSRQLYSISTESLRDRTIPDFKLSDLVQYWGEKGASDGMITDAKGNVYAGDYENDSIRKILPNGIMETIAHDPRILWPDTFSIGPDQYLYVIVNQLHRQARFHYGKDLRKKPYSLVRLKIDELPAPTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4D3</accession>
    <name>E3E4D3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56673.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025679563.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56673">
        <property type="protein sequence ID" value="ADO56673"/>
        <property type="gene ID" value="PPSC2_12675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2695"/>
    <dbReference type="eggNOG" id="ENOG5032VMF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1388114_0_0_9"/>
    <dbReference type="OrthoDB" id="1342393at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024453">
        <property type="entry name" value="Peptidase_C92"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05708">
        <property type="entry name" value="Peptidase_C92"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56673.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="21945" checksum="1DC36ACD13C25350" modified="2015-05-27" version="2">MVVESNKYQNIRDQIKNGDFLICSGNGPMSELIKKVTNSPYSHVAFIMWFHDRLMVLESVETIGVRMVPLSSYVQNYNNTNKPYDGDVFIGRHNTLSHLLLSQNTEKTTTLRIMQRALDLLGKKYGTKDLAKIALRLTVGLGRREDDDEYICSEYVAECLSPGGISFTNIGGFIVPKHIAEDPMVNVWSRISVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y1</accession>
    <name>E3E4Y1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">10-formyltetrahydrofolate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoIIIAH</name>
        <name evidence="3" type="ORF">PPSC2_15115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371781.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02735"/>
    <dbReference type="EnsemblBacteria" id="ADO57189">
        <property type="protein sequence ID" value="ADO57189"/>
        <property type="gene ID" value="PPSC2_15115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3226"/>
    <dbReference type="eggNOG" id="ENOG5030IKQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1015061_0_0_9"/>
    <dbReference type="OMA" id="AYYLFTE"/>
    <dbReference type="OrthoDB" id="1944353at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.4300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024232">
        <property type="entry name" value="SpoIIIAH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038503">
        <property type="entry name" value="SpoIIIAH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12685">
        <property type="entry name" value="SpoIIIAH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="66"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="109"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="29636" checksum="0FD0185B9CB82234" modified="2011-01-11" version="1">MNNKRQTVWLVSMLSLMVVLSAYYLFTEDSSPANPPVADSEQVSKVKQDAAQEATTKAEEQMNELKVNEVVTNGEVTNGTAETSTKDTASTTDPATEPSKGDKDTAAAPATESTASDQNTTTAKTDTTAKSDDKAASSAKTDKQVLDQVANEQAAQPTAAAVIDNYLLERDVENQKKNDELTTAMNDSTPQKAAEAQKELHVLEDKQAKITGIEEELQQQFANAVVREEDADKYKVVVLSEKLDAKQAVTIVDKVMKELNVTQDKISVQYVTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N3</accession>
    <name>E3E5N3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yurO5</name>
        <name evidence="1" type="ORF">PPSC2_18465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372489.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05680"/>
    <dbReference type="EnsemblBacteria" id="ADO57910">
        <property type="protein sequence ID" value="ADO57910"/>
        <property type="gene ID" value="PPSC2_18465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3958"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_12_0_9"/>
    <dbReference type="OMA" id="WYMYLAD"/>
    <dbReference type="OrthoDB" id="1746871at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="447" mass="49093" checksum="E940720DA7B7F0CB" modified="2011-01-11" version="1">MSNEYSVRKRSHRKWVAGLTLLLSFMLVLSGCGVGKDGQGGSSGAGGKVTLKMMHLWPEGSSAQQSKLVTQIIDQYQKDHPNVVIQQEVLENEQYKNKLKVLSASNELPDIGITWAAGFMEPYVKGGLFTPMDDLLQGSKLKDKFVPGTTDAYALDGKTYALPIELNITPIYYNKAIFQKYNLKVPATFDEFKQVVKTLVDHGVAPIALGNKDRWTGSLWYMYLADRIAGSETLKKAIDGSGSFDDPGLIQAASEIQTLVDMNAFNKGFNGLSNDEGKSEFMNDKAAMYLMATWELPNFTTNPEIPQAFKDQVGFFKFPMVAGGKGNENSWVGGPGVGLFVSENSKVKEEAKAFVEYFVEKWGEQSVTQAGVIPATKVDTSKEKLPKLYVDLLNGLNQASNITLFADVQMKPNAAQVHLNMIQALFGKAVTPQQFADQHKAAIEKGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5N5</accession>
    <name>E3E5N5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_18475</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372491.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05690"/>
    <dbReference type="EnsemblBacteria" id="ADO57912">
        <property type="protein sequence ID" value="ADO57912"/>
        <property type="gene ID" value="PPSC2_18475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3960"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_0_9"/>
    <dbReference type="OMA" id="WNTLRNQ"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="287"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="305"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="586" mass="65527" checksum="61BB780BDA802388" modified="2011-01-11" version="1">MRSKFQPLNTLRNQIFIGFILVMLIMMSVAGAFIYLNVSHLLKDSAERHIGQTAVQASGRLDALIGQMDSLTEQVANHPSVQHILLEERNGGKVTFGQRQSLLQVMHSYQAYMPSVGSLELYTAEGKMLFPIREGSLEDRIGQADIREANEMKGRLVWIGIDPENPQSLLAIRQVSLVDRWFSRGGYLITRMERSYFGLNGTSATQEEANETMLLVDRRGQLLSGEPMSQINLLDVLHSKTQTVHIGEREYVKAVQQSERTGWSLLILIPVSVVTDGITVLRTTLIISASLGAVLFLFMSFMLSTLITRPIGHLIQAMRRSREGALALNPEPAAAVELQELNAEYNTMIVDINELIRVICEKEALQSQTELKALQAQINPHFLFNTLDAFNWSLQEKGEEELAGLMVSMSRLFRYVIEPAHHDSWVTLGEEIAQVHRYLELMEMRLGERLSWQIHMPPEAARIPLPKLLIQPILENAILHGVENRIGNGRVEIRITPSARLGWTRIEVVDNGPGMTQEELAAVRTALIEGSACQSKGTGMGLVNVQRRLALYYDSASYPTDGVLIYSAVQEGTVVAFEIPDEYGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Q2</accession>
    <name>E3E5Q2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">phoR7</name>
        <name evidence="12" type="ORF">PPSC2_18555</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372508.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05775"/>
    <dbReference type="EnsemblBacteria" id="ADO57929">
        <property type="protein sequence ID" value="ADO57929"/>
        <property type="gene ID" value="PPSC2_18555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3976"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_6_9"/>
    <dbReference type="OMA" id="EYNQAQI"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="168"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="192"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="253"/>
            <end position="459"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="459" mass="51175" checksum="D78CD6C793AE2F54" modified="2011-01-11" version="1">MRTMRAKILLSLSIAMLITVCITVVLFIRLIDDILVNQAKSKLHEQARKAVHIMSDGGFDRLDNAELNYVIKGVLLSADYFILSTDNRIIDSSVSGMEGKKLERLLLTRQGFFASVHPSAHDLVTTHEGVAVLQGKKILFTNEELPGQPFRIFVYSPLSSLRALYVPLMRTTLLSIVASFLVILVIGLMVVSRLVRPLKRLKEAVGNYEPNQPQDSDFPQADKSEIGELIGTFHSMSARIQQHHHSQIEFLQNVSHELRTPLMSIQGYVYAIQDQVVSQDEGLSIIKVQSQRLIDMVEKLLQLSRLEALNEEWPVSLIDLRSMAEDAVHLLMPMASERSISLRVEGEGLHVAVPAEQLFRMILNLLQNAVRHTSTEVVIHLETGTTPEVVWVMHVDDDGEGLTESEAAEVFGRFYTGSNGATGLGLAICRQIASRLNGELLCTRSPLGGARFSYIQRMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E639</accession>
    <name>E3E639_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glcU</name>
        <name evidence="8" type="ORF">PPSC2_12900</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GRP transporter (TC 2.A.7.5) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56724.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2757"/>
    <dbReference type="EnsemblBacteria" id="ADO56724">
        <property type="protein sequence ID" value="ADO56724"/>
        <property type="gene ID" value="PPSC2_12900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2749"/>
    <dbReference type="eggNOG" id="COG4975">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076024_2_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015144">
        <property type="term" value="F:carbohydrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010651">
        <property type="entry name" value="Sugar_transport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16119">
        <property type="entry name" value="PTHR16119"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06800">
        <property type="entry name" value="Sugar_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="66"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="95"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="120"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56724.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="15615" checksum="DCE2ED107BE7A0F2" modified="2015-05-27" version="2">MSKPMPLRIIMMLVCSGLALSSYVVINQYFNISGLSVILPQSLGMLYSALVINLKGKHRLRFSPVLRNLFTGLVWSIANLALFISNGLIGMAASFPISQASIAIACVGSILIFKEKKSLYEWLAILVGITVLMIGVGMISLLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E647</accession>
    <name>E3E647_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dadA</name>
        <name evidence="2" type="ORF">PPSC2_12955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371336.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00630"/>
    <dbReference type="EnsemblBacteria" id="ADO56732">
        <property type="protein sequence ID" value="ADO56732"/>
        <property type="gene ID" value="PPSC2_12955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2760"/>
    <dbReference type="eggNOG" id="COG0665">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007884_4_5_9"/>
    <dbReference type="OMA" id="VIPYAFP"/>
    <dbReference type="OrthoDB" id="912110at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="3"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="375" mass="40701" checksum="0500C770928035D8" modified="2011-01-11" version="1">MKKVIVIGSGILGASTAYQLAKMGADVILVDRKDKGQATDAAAGIICPWLSQRRNQAWYQLAKAGARFYPELIEELKSEGETETGYAQVGALSIHDDLEKIKKMQERAHLRHTDAPEIGEITQLNEKETHEQFPLLEDRYHSVHISGAARIDGRALRDALIRSAQRNGATLIHGDAVLQYNSDHVTGVMVDGHSFSSDVVIVCAGAWANQLMLPLGIRFKVSFQKAQIMHLQIPAGQDTGTWPVIIPPSDQYLLAFDQQKIVIGATHENEIEGYDTRVTAGGMQEILNKGLELAPGLANSTFQEVRVGFRPFTPGFLPVLGAVPGWNGLIAANGLGASGLTMGPFIGSQLAKLALGMALDINIDDYDIRNAIDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E658</accession>
    <name>E3E658_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">lmrB</name>
        <name evidence="10" type="ORF">PPSC2_13010</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the major facilitator superfamily. EmrB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371347.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00700"/>
    <dbReference type="EnsemblBacteria" id="ADO56743">
        <property type="protein sequence ID" value="ADO56743"/>
        <property type="gene ID" value="PPSC2_13010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2771"/>
    <dbReference type="eggNOG" id="COG0477">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000960_28_0_9"/>
    <dbReference type="OMA" id="HWIFWIS"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004638">
        <property type="entry name" value="EmrB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00711">
        <property type="entry name" value="efflux_EmrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="63"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="119"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="144"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="175"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="206"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="238"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="276"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="341"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="366"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="405"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="446"/>
            <end position="475"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="21"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="490" mass="52470" checksum="6CB18205319BE439" modified="2011-01-11" version="1">MSTMSQTSSPSEPKTFKVLPIMIALLLSGFIGMFSETALNIALNDLMQILHITTATAQWLTTAYLLTLGILVPVSGLLLQTFTTRQLFVTSLLFSIAGCLVAALAPTFSVLLIARILQAMGTALLLPLMFNTILIIFPAEKRGAAMGIIGLVIMFAPAVGPTIAGLVLQNLSWHWIFWISLPFLVLSLICGILFMQNVSEPTKPKIDLLSIILSSIGFGGVVFGFSKSGEGGEGWTSLVVLLPVIIGVISLILFSVRQLKMKAPMLNLRVFKYPMFVIGVIMVFLCMMTILSTMLILPLFLQKGLALSALTAGLVLLPGGIINGLLSPIMGSLFDKFGPKWLVIPGLVIVAAVLFFLSGITTTSTLVLIIVLHSCLMIGISMIMMPAQTNGLNQLPMDLYPDGTAIMSTLQQVAGAIGTAVAVSILSKGMDSYLSQSSMPQSVNEMANAMVIGSQNSFFFAMVISVIGLILAFFIRRVHVEHGTAKAPMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6B6</accession>
    <name>E3E6B6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Peptidase S66</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yocD</name>
        <name evidence="6" type="ORF">PPSC2_18800</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S66 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372562.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06010"/>
    <dbReference type="MEROPS" id="S66.003"/>
    <dbReference type="EnsemblBacteria" id="ADO57985">
        <property type="protein sequence ID" value="ADO57985"/>
        <property type="gene ID" value="PPSC2_18800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4029"/>
    <dbReference type="eggNOG" id="COG1619">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034346_1_1_9"/>
    <dbReference type="OMA" id="GFIFGQC"/>
    <dbReference type="OrthoDB" id="952832at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10740">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027461">
        <property type="entry name" value="Carboxypeptidase_A_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027478">
        <property type="entry name" value="LdcA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040449">
        <property type="entry name" value="Peptidase_S66_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040921">
        <property type="entry name" value="Peptidase_S66C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003507">
        <property type="entry name" value="S66_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30237">
        <property type="entry name" value="PTHR30237"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02016">
        <property type="entry name" value="Peptidase_S66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17676">
        <property type="entry name" value="Peptidase_S66C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028757">
        <property type="entry name" value="LD-carboxypeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141986">
        <property type="entry name" value="SSF141986"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S66" evidence="4">
        <location>
            <begin position="16"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S66C" evidence="5">
        <location>
            <begin position="201"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="3">
        <location>
            <position position="232"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="3">
        <location>
            <position position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR028757-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="36620" checksum="81D3D35E7A83EA47" modified="2011-01-11" version="1">MMMGKQAPKLKAGDEIRILSPSRSLSIVSEENRLIAQHRLEALGFKVSFSQHVLENDDFASSSIESRVADLHEAFIDPKVKGILTSIGGYNANQLLAHLDYDLISAHPKRLCGYSDITALSHAIYAKTGLITYAGPHFLTFAMLRGNEYTMTYFQRLMLEEGSIQIQSSSEWSDDTWYLDQDKRSFHHNAGPYAIHEGEAEGTIVGGNLCTLNLLQGTPYMPSLKGTIVFVEDDYESSPATFDRDLQSLLHQPGFDQVKGIIIGRFQKASHMTEELLRQIIRSKRELASIPVIADADFGHTTPQFTYPIGGKALIRARNGRVRIEICE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E0</accession>
    <name>E3E6E0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">UDP-glucose 4-epimerase</fullName>
            <ecNumber evidence="5 8">5.1.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">galE1</name>
        <name evidence="10" type="ORF">PPSC2_18910</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>UDP-alpha-D-glucose = UDP-alpha-D-galactose</text>
            <dbReference type="Rhea" id="RHEA:22168"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="ChEBI" id="CHEBI:66914"/>
            <dbReference type="EC" id="5.1.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Carbohydrate metabolism; galactose metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="5 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372586.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06120"/>
    <dbReference type="EnsemblBacteria" id="ADO58009">
        <property type="protein sequence ID" value="ADO58009"/>
        <property type="gene ID" value="PPSC2_18910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4053"/>
    <dbReference type="eggNOG" id="COG1087">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007383_1_10_9"/>
    <dbReference type="OMA" id="GEHLICN"/>
    <dbReference type="OrthoDB" id="1597849at2"/>
    <dbReference type="UniPathway" id="UPA00214"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd05247">
        <property type="entry name" value="UDP_G4E_1_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005886">
        <property type="entry name" value="UDP_G4E"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01179">
        <property type="entry name" value="galE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7 8" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="9">
        <location>
            <begin position="3"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00018569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU366046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="35900" checksum="C7052E0C6049C580" modified="2011-01-11" version="1">MAILVTGGAGYIGSHTVAELLDLGEEVVVLDNLQTGHKGALLGGKLYEGDLRDKELLSKLFSENNIDAVIHFAANSLVGESMQNPGKYYDNNVFGTLSLLEAMKDAGVSKIVFSSTAATYGEPEKVPIEEGDRTEPTNVYGETKLMMERMMSWFDKVLGIKYVSLRYFNAAGAHESGKIGEDHRPESHLIPLVLQTALKQRPHIAVFGEDYATPDGTCVRDYIHVSDLADAHVRAVNYLREGNDSNIFNLGNGQGFSVKEVIETARKVTGLDIPVVTEPRRAGDPAILVASSDKARSVLGWSPKRTQLEDIISGAWGWHQSHPQGYGDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6J2</accession>
    <name>E3E6J2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">dTDP-4-dehydrorhamnose reductase</fullName>
            <ecNumber evidence="2">1.1.1.133</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">wcgU</name>
        <name evidence="4" type="ORF">PPSC2_20120</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>dTDP-beta-L-rhamnose + NADP(+) = dTDP-4-dehydro-beta-L-rhamnose + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:21796"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57510"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="1.1.1.133"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the dTDP-4-dehydrorhamnose reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.133" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372824.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07370"/>
    <dbReference type="EnsemblBacteria" id="ADO58252">
        <property type="protein sequence ID" value="ADO58252"/>
        <property type="gene ID" value="PPSC2_20120"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20120"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4288"/>
    <dbReference type="eggNOG" id="COG1091">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045518_2_2_9"/>
    <dbReference type="OMA" id="FRHKGFP"/>
    <dbReference type="OrthoDB" id="1076083at2"/>
    <dbReference type="UniPathway" id="UPA00124"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008831">
        <property type="term" value="F:dTDP-4-dehydrorhamnose reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019305">
        <property type="term" value="P:dTDP-rhamnose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005913">
        <property type="entry name" value="dTDP_dehydrorham_reduct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029903">
        <property type="entry name" value="RmlD-like-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10491">
        <property type="entry name" value="PTHR10491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04321">
        <property type="entry name" value="RmlD_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RmlD_sub_bind" evidence="3">
        <location>
            <begin position="1"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU364082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="32034" checksum="50FDBE1270242A77" modified="2011-01-11" version="1">MKLLILGGNGMAGHVLVDYFQNQGRHNVFYTTRDPENKGGLLLDVRDSFMVEQLVRSVRPDVIINAVGVLNQYAGEDQITAYQINGLLPHLLRRTADSIGARLIHISTDCVFEGKRAPGLYKETDQPDGTSAYAVTKILGEVKAAGHLTIRTSIIGPEIRREGIGLLHWFLQQSGDVDGYRRVFWNGVTTLELAKAIQVLMNEPLDGLIHLVHPEPISKHDLLLLFKDIWKREDIRIVPKDEPVQDRTLRSTRADLLYDVPHYSIMLKELLEWTEAQRNNVGLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L4</accession>
    <name>E3E6L4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcC</name>
        <name evidence="2" type="ORF">PPSC2_20215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372846.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07470"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58274">
        <property type="protein sequence ID" value="ADO58274"/>
        <property type="gene ID" value="PPSC2_20215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4308"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009583_38_2_9"/>
    <dbReference type="OMA" id="VHNEMFA"/>
    <dbReference type="OrthoDB" id="694191at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="196"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="387" mass="43070" checksum="55372E83E0E5F1AC" modified="2011-01-11" version="1">MQRLKVAVITPGSFVIPSPRSSSVERVIARMVPLASHKLQAQIYGIRGAETPDHGDVDGIPCMRYTRGAGYIPEVIADLKRWLPAVIDVHNRPTVAYAIREALPDSKIVLTLHSTTFIREPHLKRKDMGRLLLSMDRIIVNSAYLGAIVASDSPDAVRERIVINKLGIHPGDFLPRWTPAAEAIRSARLDDFGWSGRRIVLYAGRLMPGKGVHRLLKALRRIAHTCPDVLLLIAGSAYYGHDRLTPYTAALHRQIRKLRLARHVHFLGYVPHPALASLYQLADVAVVPSIEAEAFGLVNLEAMAAGVPVVASRIGGIPEVIQHGKTGWLVYPSRGEQEMADAITRLLQQHDLRRQMGEAGLDEVRRRFLWQHSAQRWAQFITDCATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L7</accession>
    <name>E3E6L7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfiF5</name>
        <name evidence="5" type="ORF">PPSC2_20230</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372849.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07485"/>
    <dbReference type="EnsemblBacteria" id="ADO58277">
        <property type="protein sequence ID" value="ADO58277"/>
        <property type="gene ID" value="PPSC2_20230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4311"/>
    <dbReference type="eggNOG" id="COG4977">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="GYRDIFF"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="165"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="261" mass="30096" checksum="343617702D05B96F" modified="2011-01-11" version="1">MLDTSASSFILLPAFAKIVCEPGWKWQVREKPMPNYDLFYVWSGEGTVVLNGEAYPVSKGSCFLFKPGDDTRATHNPQKPLILTYIHFALTEQPKQIPASYRMLEETFEVEHMLARYVRLRLERAYGADEEGRLILKQLMIHLLRADRKEPQEQQASNQLTEVIRETANYVRQHPGLPHRVEDLAARAGLSPRYFSIKFKELLGVSVQSHIISMRIERAQHLLLHAGMNVTEVAEALGYRDIFFFSRQFKQYTGKSPSEIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E764</accession>
    <name>E3E764_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosome-binding ATPase YchF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ychF</name>
        <name evidence="7" type="synonym">engD</name>
        <name evidence="7" type="ORF">PPSC2_23360</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373455.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10850"/>
    <dbReference type="EnsemblBacteria" id="ADO58919">
        <property type="protein sequence ID" value="ADO58919"/>
        <property type="gene ID" value="PPSC2_23360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4946"/>
    <dbReference type="eggNOG" id="COG0012">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018395_0_1_9"/>
    <dbReference type="OMA" id="VLRCFDN"/>
    <dbReference type="OrthoDB" id="603226at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043023">
        <property type="term" value="F:ribosomal large subunit binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04867">
        <property type="entry name" value="TGS_YchF_OLA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01900">
        <property type="entry name" value="YchF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00944">
        <property type="entry name" value="YchF_OLA1_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004396">
        <property type="entry name" value="ATPase_YchF/OLA1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023192">
        <property type="entry name" value="TGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013029">
        <property type="entry name" value="YchF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041706">
        <property type="entry name" value="YchF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06071">
        <property type="entry name" value="YchF-GTPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006641">
        <property type="entry name" value="CHP00092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00092">
        <property type="entry name" value="TIGR00092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OBG-type G" evidence="5">
        <location>
            <begin position="3"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="TGS" evidence="6">
        <location>
            <begin position="281"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="12"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="366" mass="40199" checksum="CCF50A5AF4B053B8" modified="2011-01-11" version="1">MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVPNKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKIDPISDIQTINLELILADIESVDKRIERSRKNMKGGNKQYAQEVEVLERIKESLYADKPARSVELSEDEKLIIRDLHLLTMKPVLYAANVSEDGVTEADSNPYVQKVREFAVAENAEVVPISAKVEAEIAELEGEDKAMFLEELGLAESGLNRLIKAAYRLLGLYTYFTAGVQEVRAWTIHKGTKAPGAAGVIHSDFERGFIRAEVVSYDDLVAAGSMNGAKERGQLRLEGKEYVVQDGDVMHFRFNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7G7</accession>
    <name>E3E7G7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Serine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Seryl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">serS3</name>
        <name evidence="11" type="ORF">PPSC2_24560</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-serine + tRNA(Sec) = AMP + diphosphate + H(+) + L-seryl-tRNA(Sec)</text>
            <dbReference type="Rhea" id="RHEA:42580"/>
            <dbReference type="Rhea" id="RHEA-COMP:9742"/>
            <dbReference type="Rhea" id="RHEA-COMP:10128"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78533"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.11"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="6.1.1.11" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373711.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12040"/>
    <dbReference type="EnsemblBacteria" id="ADO59178">
        <property type="protein sequence ID" value="ADO59178"/>
        <property type="gene ID" value="PPSC2_24560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5203"/>
    <dbReference type="eggNOG" id="COG0172">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023797_1_0_9"/>
    <dbReference type="OMA" id="DMPPCEL"/>
    <dbReference type="OrthoDB" id="353391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004828">
        <property type="term" value="F:serine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006434">
        <property type="term" value="P:seryl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00770">
        <property type="entry name" value="SerRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002317">
        <property type="entry name" value="Ser-tRNA-ligase_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015866">
        <property type="entry name" value="Ser-tRNA-synth_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042103">
        <property type="entry name" value="SerRS_1_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033729">
        <property type="entry name" value="SerRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010978">
        <property type="entry name" value="tRNA-bd_arm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43697">
        <property type="entry name" value="PTHR43697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02403">
        <property type="entry name" value="Seryl_tRNA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001529">
        <property type="entry name" value="Ser-tRNA-synth_IIa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00981">
        <property type="entry name" value="TRNASYNTHSER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46589">
        <property type="entry name" value="SSF46589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00414">
        <property type="entry name" value="serS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="10">
        <location>
            <begin position="140"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="30"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00031113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="429" mass="49012" checksum="7010464E468F787C" modified="2011-01-11" version="1">MLDIKWIREHQEQVQRAADDKGIQVSVAELLTLDDRRKQLLQEVEQLRQTRNQCSQDIGALIHTGKNEQAERAKRQVKEINGRLDLMEVPQQEVEEQFQQLLLLMPNIVSPDTPWGRTDEDNVELERVGTIPEFGFEPKDHMTLGQLHNLIDVHRGVKTAGTRNYYLTGAGVALHRAVQQLAVDLLSERGFQLLDVPLMVRSEAMRSTGFFPLGLDQTYRIAGEDQWLVGTSEVPLVSYYSGEIVDVTDPIRLAAVSVCFRNEVGSAGRDVHGLYRVHQFAKVEQVIICEASLDASEQMFQEITRNAEDLLQLLELPYRKMAVCTGDMSQKTYKQVDIETWMPSRQAYGETHSSSQLLDFQARRSNIRYRNADGKLQYCYTLNNTAVASPRILIPLLEHHQQEDGSIRIPEALRQYMPQHMDFLRVPTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7G8</accession>
    <name>E3E7G8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Flavohemoprotein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Flavohemoglobin</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Hemoglobin-like protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Nitric oxide dioxygenase</fullName>
            <shortName evidence="11">NO oxygenase</shortName>
            <shortName evidence="11">NOD</shortName>
            <ecNumber evidence="11">1.14.12.17</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 16" type="primary">hmp</name>
        <name evidence="16" type="ORF">PPSC2_24565</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>NADH + 2 nitric oxide + 2 O2 = H(+) + NAD(+) + 2 nitrate</text>
            <dbReference type="Rhea" id="RHEA:19469"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16480"/>
            <dbReference type="ChEBI" id="CHEBI:17632"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.14.12.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 11">
            <text>NADPH + 2 nitric oxide + 2 O2 = H(+) + NADP(+) + 2 nitrate</text>
            <dbReference type="Rhea" id="RHEA:19465"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16480"/>
            <dbReference type="ChEBI" id="CHEBI:17632"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.14.12.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="11">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="11">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="domain">
        <text evidence="11">Consists of two distinct domains; an N-terminal heme-containing oxygen-binding domain and a C-terminal reductase domain with binding sites for FAD and NAD(P)H.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the globin family. Two-domain flavohemoproteins subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.14.12.17" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373712.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12045"/>
    <dbReference type="EnsemblBacteria" id="ADO59179">
        <property type="protein sequence ID" value="ADO59179"/>
        <property type="gene ID" value="PPSC2_24565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5204"/>
    <dbReference type="eggNOG" id="COG1017">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1018">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003827_12_0_9"/>
    <dbReference type="OMA" id="ADIHYEV"/>
    <dbReference type="OrthoDB" id="1834577at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008941">
        <property type="term" value="F:nitric oxide dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005344">
        <property type="term" value="F:oxygen carrier activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051409">
        <property type="term" value="P:response to nitrosative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009636">
        <property type="term" value="P:response to toxic substance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01252">
        <property type="entry name" value="Hmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000971">
        <property type="entry name" value="Globin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023950">
        <property type="entry name" value="Hmp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43396:SF3">
        <property type="entry name" value="PTHR43396:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00042">
        <property type="entry name" value="Globin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01033">
        <property type="entry name" value="GLOBIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0216">Detoxification</keyword>
    <keyword evidence="11" id="KW-0274">FAD</keyword>
    <keyword evidence="6 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 11 13" id="KW-0349">Heme</keyword>
    <keyword evidence="9 11" id="KW-0408">Iron</keyword>
    <keyword evidence="7 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 11" id="KW-0520">NAD</keyword>
    <keyword evidence="8 11" id="KW-0521">NADP</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11 13" id="KW-0561">Oxygen transport</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 13" id="KW-0813">Transport</keyword>
    <feature type="domain" description="GLOBIN" evidence="14">
        <location>
            <begin position="1"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="15">
        <location>
            <begin position="152"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="region of interest" description="Reductase" evidence="11">
        <location>
            <begin position="149"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <feature type="binding site" description="proximal binding residue" evidence="11">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="206"/>
            <end position="209"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="276"/>
            <end position="281"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="397"/>
            <end position="400"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="site" description="Involved in heme-bound ligand stabilization and O-O bond activation" evidence="11">
        <location>
            <position position="29"/>
        </location>
    </feature>
    <feature type="site" description="Influences the redox potential of the prosthetic heme and FAD groups" evidence="11">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <feature type="site" description="Influences the redox potential of the prosthetic heme and FAD groups" evidence="11">
        <location>
            <position position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS01033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO59179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="409" mass="45664" checksum="E054F72795C42A41" modified="2011-01-11" version="1">MLSEQTIATIKSTVPVLEVHGTTITKRFYQMMFEAHPELLNIFNHANQKQGRQQGALANAVYAAAQHIDRLEEILPVVRQIAHKHRSLGIKPEHYPIVGKYLLAAIKDVLGDAATDEIINAWAEAYGVIANVFIDVEAEMYKNAEQQQGGWSDFKNFVVQKKVKESDQITSFYLVPQDGQVLPAFEPGQYISLQMQIPGEHNTHIRQYSLSDAPGQPYYRISVKREDAVGSRPAGKVSVYLHEQVQEGDVLRVSAPAGDFTLDQTDRRPVVLISGGVGLTPMVSMLASLVKSAPDRPVTFVHAAVNGDNHALRNEVEKLVATHAQAAVRWCYSRPTEQDRLAQAFHKEGRLDLAWLQSVIPERNAQYYFCGPVGFMQSVYGLLKEWNIPASDIHYEFFGPASAWEAEAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7H2</accession>
    <name>E3E7H2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Permease IIC component</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ydhO3</name>
        <name evidence="11" type="ORF">PPSC2_24585</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373716.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12065"/>
    <dbReference type="EnsemblBacteria" id="ADO59183">
        <property type="protein sequence ID" value="ADO59183"/>
        <property type="gene ID" value="PPSC2_24585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5208"/>
    <dbReference type="eggNOG" id="COG1455">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029688_1_0_9"/>
    <dbReference type="OMA" id="VFVIWFP"/>
    <dbReference type="OrthoDB" id="425893at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004501">
        <property type="entry name" value="PTS_EIIC_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004796">
        <property type="entry name" value="PTS_IIC_cello"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006351">
        <property type="entry name" value="PTS_EIIC-Cellobiose"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00359">
        <property type="entry name" value="cello_pts_IIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00410">
        <property type="entry name" value="lacE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51105">
        <property type="entry name" value="PTS_EIIC_TYPE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="28"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="138"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="217"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="284"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="381"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-3" evidence="10">
        <location>
            <begin position="5"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR006351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO59183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="442" mass="48534" checksum="6253399550526D83" modified="2011-01-11" version="1">MFEKLSRILIPIAGKLNNNRYLTVLRDAFMLSFPLTVFGSIIVVIINLPFLKGWMGDGNYATFNSLLNIAPSATLNIMTLFVVVGIGYYLSRSYKVEPIFGGMIALVSFLMLTPFVLTQENGATIAGVIPLDRIGAKGMFLGMIVAFIAAEIYRRVTQRNIVIKMPPGVPPAVAKSFAALLPACITLGIFLIVNVVVTLTLHNNLHDLIYHAVQAPLVHLGSGIIPTLIAIFFVQLLWFFGLHGQIIINSVMEPIWNTLALENYEAYSKGAELPHIITKQFVDIYTVGIGGTGMTLAVVLTILIFLKSKQLKQVSKLAIGPGLFNVNEPVIFGLPIVMNPLIFVPWVIAPMIVTLITYFAMSTGLVPPPNGIQVPWTMPLFFSGMMATGSLMGGVLQLFNMAVVFVIWFPFLKFIDRMNVRKEQEEEINQAAIAGKDQTVGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7P1</accession>
    <name>E3E7P1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HAD family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yjcH1</name>
        <name evidence="1" type="ORF">PPSC2_13505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371449.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01190"/>
    <dbReference type="EnsemblBacteria" id="ADO56846">
        <property type="protein sequence ID" value="ADO56846"/>
        <property type="gene ID" value="PPSC2_13505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2875"/>
    <dbReference type="eggNOG" id="COG0546">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074041_0_0_9"/>
    <dbReference type="OMA" id="DDTLWVN"/>
    <dbReference type="OrthoDB" id="1204073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="29832" checksum="C20A6072BC639B0C" modified="2011-01-11" version="1">MSYPKQHILFDLDDTLVHCNKYFDLILNHFFDLLQEWFAAHNLTRNTIREKQIEIDVAGVHQVGFASEHFPQSLIDTYQFFSEQFGRRTDSREEQELRSLGRSVYEQEIEPYPGMAETLNSLQKAGHSLHLYTGGEQVIQERKIEQMKLATYFDDRIYIRQHKNVEALEEIIQINRLDRGITWMIGNSLRTDVSPALAAGIHAVYLKQPKEWIYNMVELQKNVNSVMYTIQKLTEVPRVIHESIQLHQQKRTLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R0</accession>
    <name>E3E7R0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Heme ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yfmM</name>
        <name evidence="6" type="ORF">PPSC2_13600</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371468.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01285"/>
    <dbReference type="EnsemblBacteria" id="ADO56865">
        <property type="protein sequence ID" value="ADO56865"/>
        <property type="gene ID" value="PPSC2_13600"/>
    </dbReference>
    <dbReference type="GeneID" id="66577260"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2894"/>
    <dbReference type="eggNOG" id="COG0488">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_36_0_9"/>
    <dbReference type="OMA" id="YLDQHTK"/>
    <dbReference type="OrthoDB" id="1112046at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="324"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="280"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="286"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="357"/>
            <end position="364"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="517" mass="59056" checksum="AE17F636455E88AF" modified="2011-01-11" version="1">MSLLTVENVSHNFGDRALFKNVSFRLLAGERVGLVGANGVGKSTLMNILTGKLLKDEGKVEWTPRVRYGYLDQHTKLTPGKTVRDVLKDAFLPLLELEKEMMQITDKMGEASPEELEVLLEQMGEIQEQLDMGDFYLIDVKVEEMANGLGLSAIGLDRDVAALSGGQRTKVLLAKLLLEKPNVLLLDEPTNYLDVEHIEWLTRYLKDYPYAFILISHDTEFMNQVVNVIYHLEFAKMTRYSANYEKFLEMADLNKAQHIDAYEKQQEYIKKQEDFIQRNKARASTSGRAKSREKQLDRIERIDKPEEAAKPTFQFKEARASGKTVFEGIDFEIGYTHALLPKMSMTIERGEKIAIVGCNGVGKSTLLKTILGKIPPISGKTYQGDFLQPAYFEQEVKAEKITPIDDVWNEFPHLNQHEVRAHLARCGLKNEHITRPLSALSGGEQAKVRLCKLLMRESNWVLFDEPTNHLDVKAKDELKRALKEYKGTVLLVSHEPDFYEDWVTKTWNVEEWSSKVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7U2</accession>
    <name>E3E7U2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pseudouridine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rluD1</name>
        <name evidence="2" type="ORF">PPSC2_14105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371575.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01760"/>
    <dbReference type="EnsemblBacteria" id="ADO56975">
        <property type="protein sequence ID" value="ADO56975"/>
        <property type="gene ID" value="PPSC2_14105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3011"/>
    <dbReference type="eggNOG" id="COG0564">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016902_11_2_9"/>
    <dbReference type="OMA" id="FTEPAHR"/>
    <dbReference type="OrthoDB" id="1714699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140098">
        <property type="term" value="F:catalytic activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009982">
        <property type="term" value="F:pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034470">
        <property type="term" value="P:ncRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001522">
        <property type="term" value="P:pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02869">
        <property type="entry name" value="PseudoU_synth_RluA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PseudoU_synth_2" evidence="1">
        <location>
            <begin position="24"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="27413" checksum="0C7E053FD80F97A3" modified="2011-01-11" version="1">MNQDELTRQEHAQPNIPVLYEDNHVLAVVKPVNVPTQEDASGDPDLLSLLKEDLKIRHNKPGNVFLGLVHRLDRPVGGAMIFAKTSKAASRLSESVRSRHFHKLYTAVLNGVPAALQGRLTHYLLKDSRTNTVKTVRPGTAGAKEAILEYRVIGQAAGLSLVEIKLHTGRSHQIRVQMQAIGCPLYGDQKYGGNLSRPGQQLALWSLLAGAPHPVSKEAMSFHSLPPVQFPWSEWPLSLYEKMITSEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8K3</accession>
    <name>E3E8K3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glycine--tRNA ligase alpha subunit</fullName>
            <ecNumber evidence="8">6.1.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Glycyl-tRNA synthetase alpha subunit</fullName>
            <shortName evidence="8">GlyRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 9" type="primary">glyQ</name>
        <name evidence="9" type="ORF">PPSC2_16830</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly)</text>
            <dbReference type="Rhea" id="RHEA:16013"/>
            <dbReference type="Rhea" id="RHEA-COMP:9664"/>
            <dbReference type="Rhea" id="RHEA-COMP:9683"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.14"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372135.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04165"/>
    <dbReference type="EnsemblBacteria" id="ADO57552">
        <property type="protein sequence ID" value="ADO57552"/>
        <property type="gene ID" value="PPSC2_16830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3591"/>
    <dbReference type="eggNOG" id="COG0752">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057066_1_0_9"/>
    <dbReference type="OMA" id="SYYQFQV"/>
    <dbReference type="OrthoDB" id="676868at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004820">
        <property type="term" value="F:glycine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006426">
        <property type="term" value="P:glycyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00733">
        <property type="entry name" value="GlyRS_alpha_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00254">
        <property type="entry name" value="Gly_tRNA_synth_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006194">
        <property type="entry name" value="Gly-tRNA-synth_heterodimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002310">
        <property type="entry name" value="Gly-tRNA_ligase_asu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02091">
        <property type="entry name" value="tRNA-synt_2e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01044">
        <property type="entry name" value="TRNASYNTHGA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00388">
        <property type="entry name" value="glyQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50861">
        <property type="entry name" value="AA_TRNA_LIGASE_II_GLYAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="34038" checksum="40F3A142C42196C9" modified="2011-01-11" version="1">MNFQQMILTLQQFWSEHNCIIVQPYDTEKGAGTMNPMTYLRSIGPEPWNVAYVEPSRRPSDGRYGENPNRLYQHHQFQVVLKPSPDNIQELYLESLSRLGINPLEHDIRFVEDNWEAPTLGAWGLGWEVWLDGMEITQFTYFQQVGGIDASPVAVEITYGMERLASYIQDKENVFDLEWVNGISYGDVFHQPEFEHSKYTFEVSDVKMLFTLFNMYEEEANKAMAQHLVFPAYDYVLKCSHTFNLLDARGAISVTERTGFIIRVRNLARQVAATYLEEREKLGFPLLKKGGAANV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8T4</accession>
    <name>E3E8T4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">GTP 3',8-cyclase</fullName>
            <ecNumber evidence="3 12">4.1.99.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Molybdenum cofactor biosynthesis protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">moaA</name>
        <name evidence="14" type="synonym">moaA3</name>
        <name evidence="14" type="ORF">PPSC2_17955</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>AH2 + GTP + S-adenosyl-L-methionine = (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate + 5'-deoxyadenosine + A + H(+) + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:49576"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:131766"/>
            <dbReference type="EC" id="4.1.99.22"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12">Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Monomer and homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the radical SAM superfamily. MoaA family.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.22" evidence="3 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372373.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05275"/>
    <dbReference type="EnsemblBacteria" id="ADO57793">
        <property type="protein sequence ID" value="ADO57793"/>
        <property type="gene ID" value="PPSC2_17955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3837"/>
    <dbReference type="eggNOG" id="COG2896">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_0_1_9"/>
    <dbReference type="OMA" id="IEFMPIG"/>
    <dbReference type="OrthoDB" id="1199289at2"/>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019008">
        <property type="term" value="C:molybdopterin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061798">
        <property type="term" value="F:GTP 3',8'-cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904047">
        <property type="term" value="F:S-adenosyl-L-methionine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01225_B">
        <property type="entry name" value="MoaA_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013483">
        <property type="entry name" value="MoaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000385">
        <property type="entry name" value="MoaA_NifB_PqqE_Fe-S-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010505">
        <property type="entry name" value="Mob_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06463">
        <property type="entry name" value="Mob_synth_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
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    <keyword evidence="4 12" id="KW-0949">S-adenosyl-L-methionine</keyword>
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        <location>
            <begin position="9"/>
            <end position="227"/>
        </location>
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        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
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            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
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            <name>[4Fe-4S] cluster</name>
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            <dbReference type="Proteomes" id="UP000006868"/>
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    </evidence>
    <sequence length="338" mass="38523" checksum="B8685A09DEDEF1B5" modified="2011-01-11" version="1">MSSHSLKDLLRRPIRDLRISVTDRCNFRCSYCMPKEIFGDDFAFLPKSECLSFEEIHRLTELFVGLGVKKIRLTGGEPLMRPNLPDLVSRILSINGVEDMGLTTNGLLLGQQAQRLYDAGLRRLNVSVDALNPELFGRMNGRGIKPAFILKQIDCAREIGFEIKVNMVVQKGVNDSEILPMAAYFKEQGITLRFIEFMDVGNDTGWSFKKVVTKEEIIERLKNAYELEPIDQNYFGEVAKRYRYKDSDAQVGFITSVSDSFCSSCTRARLSSDGKFYTCLFASDGFDLRQMLRNGANNEELLDAITSVWEQRLDRYSDERTEETANNRKKINMSYIGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8T7</accession>
    <name>E3E8T7_PAEPS</name>
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        <submittedName>
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    </gene>
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        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
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        <property type="term" value="F:ubiquitin-like modifier activating enzyme activity"/>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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        <location>
            <begin position="5"/>
            <end position="241"/>
        </location>
    </feature>
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        <source>
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            <dbReference type="Proteomes" id="UP000006868"/>
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    <sequence length="339" mass="37685" checksum="87EC6F5359DB3A49" modified="2011-01-11" version="1">MKERYSRQILFRPIGSEGQRNLSEAVVTIIGCGALGSAIAETLVRAGVGEIHLVDRDYVETSNLQRQQLFTEQDAVQMLPKVMAAEKRLKAIREDVRLYTYLDSLDAGLAQELAGKSTLLMDATDNFETRLLINDAALKAEIPWIYGACVGSTGVVFPFVPGKSACFRCLLPSLPAINQTCDTAGIISPAVQVTAALQCAEAMKWLSGKRDKMRSKVHLFDLWENTQMDIGISRIRNQDCPTCGEQPEFPALTATHRSAYAALCGRDVVQVLPDPHRPITLDDAEKMGRLMAEHVKRTPYFVEFYAFKHRMILFKNGRLLIHGIGSVARGQKLYHQLFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
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    <name>E3E8V2_PAEPS</name>
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        <submittedName>
            <fullName evidence="7">Permease</fullName>
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    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
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            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.</text>
    </comment>
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    </dbReference>
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    <dbReference type="eggNOG" id="COG2252">
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    <dbReference type="OMA" id="TPGMGVN"/>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015205">
        <property type="term" value="F:nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904823">
        <property type="term" value="P:purine nucleobase transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
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        <property type="entry name" value="Azg-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43337">
        <property type="entry name" value="PTHR43337"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="6">
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            <begin position="50"/>
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            <end position="93"/>
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            <end position="301"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="6">
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    <feature type="transmembrane region" description="Helical" evidence="6">
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    <feature type="transmembrane region" description="Helical" evidence="6">
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            <end position="401"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="413"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00005697"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="432" mass="45962" checksum="041DBBEBA2FC00CF" modified="2011-01-11" version="1">MKDGLWSRSLGFKPEHHWKKELAAGAISYFSVVYIIMVNATILADAGIPLQGAMLGTLLTSMIGCLLMAFGGKSPMVVVPGMGINAFFTYTLVHSMKLSWQEALMVVAVTGVIFAIVAFTSLYKLISQAIPHNLQHGITVGIGLFLTFIGLQKSGIVIAHQTTFVAIGHFNDPKVITACVTLLLAIVLFVRNVQGGLLISILAGTGLAYVLGAVEPASTVRTSETVRQYGQLFGELSFSGIVSVAFWIAVFLLLLIVLFENVGMITAQTNMIGRPDSFKNSLRVLAVTNIFAGILGSSPAVAAAESTAGIAAGGRSGMTPLVTAILFGATFFFIPLLAYIPDSAIAPVLIIIGGLMVQNVREMDFSDFTESFPAFLIMVMMPFTYSIVDGMAFGFIAYPVAKLAAGRGKEVPVALYIISVLFVANFVLHSLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Y1</accession>
    <name>E3E8Y1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidoglycan-binding protein LysM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoVID</name>
        <name evidence="3" type="ORF">PPSC2_19310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372654.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06510"/>
    <dbReference type="CAZy" id="CBM50">
        <property type="family name" value="Carbohydrate-Binding Module Family 50"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58079">
        <property type="protein sequence ID" value="ADO58079"/>
        <property type="gene ID" value="PPSC2_19310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4121"/>
    <dbReference type="eggNOG" id="COG1388">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_494199_0_0_9"/>
    <dbReference type="OMA" id="PDCGCRE"/>
    <dbReference type="OrthoDB" id="365209at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysM" evidence="2">
        <location>
            <begin position="2"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="2">
        <location>
            <begin position="62"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="447"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="127"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="451"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="477"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="523"/>
            <end position="542"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="542" mass="59557" checksum="30D1B155AAAA3730" modified="2011-01-11" version="1">MKIHIVKKGDTLYLLAQKYNVTLEKVIAANPQLADPNQLSIGEKIKIPTDPVTMETQPSTVYQHKVKQGDTLWKLSKAWNVPLKLIIDANSQLKNPNALLVGETVNIPHYKESVSDLSVNKKNTAVKEEMTQPKPESPTKEELTQPKAELTQPKPENMPSPKEEMTQPKETVNPPKLPELKLPEVPMAPVNMAPVNPAPPQLQPIITQPAPPQQMQPIVTQPIAPKPQFPVHIEKQPVTEKFCGCTSSKPMENSSWPLQQPAFDYSPPINAMPNSWYPGIGSPQNWGNAPVNTSFAEHASPTVVADQGYHHDCEHPWCWGPVQTAPIHAHPTPYPAYSDCCCTPGYYPNHEASENTSYPVYPPFIHQGGPQQQPESAVQGSQWGNAWGGPQYSMPASGYVSDFSQPIGQHSANHPYHPFAHGNAPMYPLEGYTTPYMFMPDCGCREGNTESAPASPGTQEVGNNLAIPSQNEVASSSKKDDSARKGKSKDISSSTSKEETSKAKVSSEHDTIKKHKSRKSTGGRSRSSSYSARARQNPWIND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-04-07" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E932</accession>
    <name>E3E932_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yybC</name>
        <name evidence="2" type="ORF">PPSC2_24815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59239.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675731.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5302"/>
    <dbReference type="EnsemblBacteria" id="ADO59239">
        <property type="protein sequence ID" value="ADO59239"/>
        <property type="gene ID" value="PPSC2_24815"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24815"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5260"/>
    <dbReference type="eggNOG" id="ENOG5032QWV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113291_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59239.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="19101" checksum="9B3884279D0E68DE" modified="2015-05-27" version="2">MPTTKKENFYFGLMMCLGMVVFMTLYNLYTNGLIGTMSLKAMLLQFILCFITAFVLELCIVGPVAKKIAFSLPYDKSKRLFVILSLSCCMVIGMVLCMSLYGLGTAYFFNSLSEGSLFKNYLSLVVKNFAFAFPLQLCIVGPLVRYLFVRFVKGTSMGMPLGKNVVNDGIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9C4</accession>
    <name>E3E9C4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_16095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371983.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03785"/>
    <dbReference type="EnsemblBacteria" id="ADO57397">
        <property type="protein sequence ID" value="ADO57397"/>
        <property type="gene ID" value="PPSC2_16095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3439"/>
    <dbReference type="eggNOG" id="COG0657">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2755">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_547305_0_0_9"/>
    <dbReference type="OMA" id="THFSDEG"/>
    <dbReference type="OrthoDB" id="1247435at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01821">
        <property type="entry name" value="Rhamnogalacturan_acetylesterase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001375">
        <property type="entry name" value="Peptidase_S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037459">
        <property type="entry name" value="RhgT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43695">
        <property type="entry name" value="PTHR43695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00326">
        <property type="entry name" value="Peptidase_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S9" evidence="1">
        <location>
            <begin position="85"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="SGNH_hydro" evidence="2">
        <location>
            <begin position="263"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="498" mass="55769" checksum="A75981A10047568A" modified="2011-01-11" version="1">MLHVVSSKEQIVKEEFPLDTSFLSLYPVAVREARPFVLVLPGGGYEHLASHEGKPIARWLNDLGIHAGVLEYQVGDFEVTSLLEDVEHALQWIRQTSHDWQVIPDQVGLIGFSAGGHLASIVSTIGAEKPNLLMLGYPVISFHEPYTHLGSRTHFLGEQPNSEQLQAFSSDRQVTAQTPPTFMWTTANDGAVPVENSLLFAFSLSRERIPFELHVFEEGRHGLGLSEDNRECRQWLDLAEKWLQKHGYAQTRQRMTTRLFIAGDSTAAQKGATEKPMTGWGEHLQTYLDPAVHVDNRAVNGRSTKSFIAEGRLADIEKDIQAGDYLFIQFGHNDEKKEDPTRYTDPEGEYRLNLIQFIQSARERGGIPVLLTSVSRRRFTADGEPDPLAVGAYPAAMRKVAEETQTPLLDIFEASQQLYRSMGEKESQLLFMHLPEKMHPNYPAGVADNTHFSDEGARKIAQLVAEAICQSTELSALKQCMIDRNLNISESVAHQLVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9P7</accession>
    <name>E3E9P7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lacR</name>
        <name evidence="2" type="ORF">PPSC2_18160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372416.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3885"/>
    <dbReference type="EnsemblBacteria" id="ADO57837">
        <property type="protein sequence ID" value="ADO57837"/>
        <property type="gene ID" value="PPSC2_18160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3879"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_100_0_9"/>
    <dbReference type="OMA" id="LHKARML"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009594">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06719">
        <property type="entry name" value="AraC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="201"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="34667" checksum="6DC180D33F19E048" modified="2011-01-11" version="1">MKATEIESSTTEKQAELPSLIEQFTSHDGVHATDIPSLYFVRSSNTTVPIYQVHEPALCIVAQGRKVVILAEESYYYGTSDYLVVSVDLPISGQVIQASTDAPYLCLRLNFDPHQVLDLINEPACSANSSTGSRRGLYVSQTNLPLLDAVVRLVRLLENPQDVAVLAPLVIREILYRILQGNQGESLKQLVMTGSHSSRIAEVIKRIKQDYDKPLRIEELSQLASMSPSSLHRHFKEVTAMSPMQYQKQLRLQEARRLLLSESADAADVGFQVGYESPSQFSREYARLFGLPPIRDIKRLRVDQDHLQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9U6</accession>
    <name>E3E9U6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372465.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3934"/>
    <dbReference type="EnsemblBacteria" id="ADO57886">
        <property type="protein sequence ID" value="ADO57886"/>
        <property type="gene ID" value="PPSC2_18375"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3931"/>
    <dbReference type="eggNOG" id="ENOG50348UJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094498_1_0_9"/>
    <dbReference type="OMA" id="PNSHGAF"/>
    <dbReference type="OrthoDB" id="1697618at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025460">
        <property type="entry name" value="DUF4280"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14107">
        <property type="entry name" value="DUF4280"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="16646" checksum="779E315878A997E8" modified="2011-01-11" version="1">MFLPILIKALAQGALSGEHSYVVRGAKLQCSQGTDPGVLNMMYSHGVFIKDKPVLNVDDAICGANISKINAFGLCKLKHGLPCEPEIAFGSKWTGGKEDVLIEGAPALLNNSTLMCSCQDVLTNTFNFMIDPSDDGTLSSAIGPSGGGIISIIDDGQDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9X8</accession>
    <name>E3E9X8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Uroporphyrinogen-III C-methyltransferase</fullName>
            <ecNumber evidence="1">2.1.1.107</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">hemX</name>
        <name evidence="9" type="ORF">PPSC2_19460</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.107" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372684.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06660"/>
    <dbReference type="EnsemblBacteria" id="ADO58111">
        <property type="protein sequence ID" value="ADO58111"/>
        <property type="gene ID" value="PPSC2_19460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4151"/>
    <dbReference type="eggNOG" id="COG0007">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1587">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011276_6_0_9"/>
    <dbReference type="OMA" id="VTGRYEW"/>
    <dbReference type="OrthoDB" id="1185397at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004851">
        <property type="term" value="F:uroporphyrin-III C-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004852">
        <property type="term" value="F:uroporphyrinogen-III synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019354">
        <property type="term" value="P:siroheme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06578">
        <property type="entry name" value="HemD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11642">
        <property type="entry name" value="SUMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10090">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036108">
        <property type="entry name" value="4pyrrol_syn_uPrphyn_synt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003754">
        <property type="entry name" value="4pyrrol_synth_uPrphyn_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006366">
        <property type="entry name" value="CobA/CysG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003043">
        <property type="entry name" value="Uropor_MeTrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02602">
        <property type="entry name" value="HEM4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69618">
        <property type="entry name" value="SSF69618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01469">
        <property type="entry name" value="cobA_cysG_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00839">
        <property type="entry name" value="SUMT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00840">
        <property type="entry name" value="SUMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="7">
        <location>
            <begin position="4"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="HEM4" evidence="8">
        <location>
            <begin position="267"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="518" mass="56606" checksum="942F7120DA2407C5" modified="2011-01-11" version="1">MVGKVYLVGAGPGDARLITVKGWECIQLGDVIVYDRLASPRLLGLMKPGAQKIYVGKLPDRHTMKQEEINQLLVDLALEGKTVVRLKGGDPTIFGRVGEEAGLLRKHGISYEIIPGITSAISVPAYAGIPVTHRDMASSLSIITGHESPDKLDKSIHWDKVTNATGTLIFMMGVAKIGYISDQLIKHGKSSDTPVALIRWGTRAEQDTLVGTLADIEAKVKAANFQPPAVIVVGEVVNQREQLKWAEDMPLFGKRILVTRARAQASSLVHRIEELGGEPYEFPVIQTVVPSDEQAKQKIKEAFARLPEYDWVFFTSVNGVEYFFTHLKEQGKDVRALYKARIAAVGPATADALRAHGIVAEQIEGPFQAEGLLEAFEQDLQAGQNVFLPRGDLARSWLPDQLREMGLRVTEADLYQTVLAANTQDDELLKLLEERAIHAITFTSSSTVTFFLEALRQMGISDPVSLLEGVTIAVIGPLTGETATQAGLTVSLMSEKATIESLIQSLCDWKQSSTVMTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA19</accession>
    <name>E3EA19_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372724.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4202"/>
    <dbReference type="EnsemblBacteria" id="ADO58152">
        <property type="protein sequence ID" value="ADO58152"/>
        <property type="gene ID" value="PPSC2_19655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4191"/>
    <dbReference type="eggNOG" id="COG2244">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_249904_0_0_9"/>
    <dbReference type="OMA" id="AAIHYFF"/>
    <dbReference type="OrthoDB" id="2030at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="217"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="255"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="312"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="350"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="397"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="432"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="1447"/>
            <end position="1466"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1475" mass="168295" checksum="B8E8F5B8F885ADD5" modified="2011-01-11" version="1">MKKWIFRYRYDMAAIIWMLVAIVAYLAPIYGPGQIVFSDIAFGATSHRYLEEITGVWNERWSTSTLFNAPRILYILPFYGLSLLFDESGPVLLKSFITGLLFVSAFSMYAFAKRLVSVYYSPSFTKTRIFAIVVGSLFYALNPWVIFRIQHIYLLCGYSLFPLMLRFFFSAVDPKFQIQQIKNYHPHKLYQRNWIDLFLLAAVFTVSAAAIHYFFFGMIYLGLFTMLLLLKLTWTHRKAGRAYLQPLYGNFLRKGMIFGVFFGLLSFYWLSLYVGSMLMDAQASQHNINVVDTLSLFSRNSSLYNVGYLLSYWWPMFSFSSLPAMFYVGGGFLLLLIGYAMVTRSHKNPIILIFSLLTLLFMVAATGTTFPSIAKWFVILVTKTPVIGSVFRDPNKFIGLLSLNFGVLLTFGVIQCMEWFGSSPLQRGYKKLAVVIVVLCLGVYLAPLRTQFIEGYYKPVQVPEAYSQMAEKLTDSDRFDSKALYFPIADNMIQSYNGVATPKWNKGKTATEKATGDFQVYSSPKNTIFHHEGNDPGITYYMNFLQYVMDNGLSSRLGWLFSTFGVNQLVYHDEYEGQEKRQDFHLSQLEGQTGLKRTYKNDLFSIFNLDQAPPYMNILASKIVTPYGFSRLESYSHLPGFDFSRFGVLFSALKPELNTIQTVNKGDYVEAASFNDLLLSQLPAEDYLRPFDAIEDGNAFLKWSKTFASTNDWLWYLSSQNIRNFPFDMEMDAGIAVTFASKKLDVAPYQMSSIEGNTVLDFDSMLRTETFFKPDNPQLFSVQANPREESNDVPTLHGEIMKGDPSNIWQVARSGLLEAKENNPYQFHITVSGRGTNKMHVKMRFYDKQMRELGVSYVVAPSEGYNFDSVKFYGEYVSPPGSYWMRMDLLTLQRPQQKNYWWIHDIQLRDLGQYSKPNTFTMHKKMDQPQTSHVYARVFMNKAGGKLQVTLPDGVTNIKTHDEGLNQFQWVDLGEHVFPKGDNPVTVNNLQGFNAVNQFAIVPVDQLDQLSFPVEQALKRGKLFFTLEAESDFNAQGNVQTERALPRLSMGRGISYQKGTLSREVEVTKTGTYGTAILANLPAGYEGSLAMKWKNEETGEVLTRTIRTGESYKRLPATSLSEKQVIETVPNQDGFAKKIIQIPDLLNDYGRVEFKNLFLTKGKYRLTLALDSQVPSLSHFADIHRMDGQEVTVMPGQDTKESLGSDVGCVADIRPGQTNLSIQDKELSIRYAPSYSCDWNIYASKKMKAEPLQEYVVQLDARSEQIGSRHMKVIFLNKASQILQTSYIDEVEERDKEQWNHYDQIVKAPAGTVLMQFQILAHAHKKQSGLFQMRQYSIIPYQAMITVDQFTLFEGTDMETFFMAPHASESIQATRENSMERSFTLYNPMHQQVLIRETESPNPLWEFRLGSENQRARLSVNGVTTGFITNGSGNGKVVIILASAYRFGWVLFVIGILGGAACFLPYRRWTKRKLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAA0</accession>
    <name>E3EAA0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcription antiterminator LicT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arbG9</name>
        <name evidence="2" type="ORF">PPSC2_20750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372961.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4443"/>
    <dbReference type="EnsemblBacteria" id="ADO58392">
        <property type="protein sequence ID" value="ADO58392"/>
        <property type="gene ID" value="PPSC2_20750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4425"/>
    <dbReference type="eggNOG" id="COG3711">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078802_0_0_9"/>
    <dbReference type="OMA" id="CSIALHI"/>
    <dbReference type="OrthoDB" id="1193348at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.24.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004341">
        <property type="entry name" value="CAT_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036650">
        <property type="entry name" value="CAT_RNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011608">
        <property type="entry name" value="PRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036634">
        <property type="entry name" value="PRD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03123">
        <property type="entry name" value="CAT_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00874">
        <property type="entry name" value="PRD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01061">
        <property type="entry name" value="CAT_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50151">
        <property type="entry name" value="SSF50151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63520">
        <property type="entry name" value="SSF63520"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="65"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="171"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="32373" checksum="4F415DBB972D92CE" modified="2011-01-11" version="1">MNIAKVINNNVISVYQTDGTELVVMGRGIAFKKKPGDKVDETRIQKVFALKNKQTSDNFKMLLREVPMDLIVIVEEVINDAKHNLNRKLNENIYVSLTDHINFAIERYREGLEIKNALLWEIKQLYKEEFAIGLRTLEQIKQKLGIELPVDEAAYIALHIVNAEMNEEVITTMSITKFIQQIINIAKYHFKVDFDEDSLSYFRFITHLKFFAQRVFKGNHYENNYDHLYDMIKEKHKEAAACTEKIGTFVKKEYGHELTNEEKLYLTVHIERVVNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAD9</accession>
    <name>E3EAD9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">galnAc-T11</name>
        <name evidence="2" type="ORF">PPSC2_21610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373124.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08805"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58557">
        <property type="protein sequence ID" value="ADO58557"/>
        <property type="gene ID" value="PPSC2_21610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4594"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_896716_0_0_9"/>
    <dbReference type="OMA" id="CETELWI"/>
    <dbReference type="OrthoDB" id="1445278at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="5"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="317" mass="35869" checksum="766BF64F03D92441" modified="2011-01-11" version="1">MLSLSIALCTRNRVDDLTRCINSIAMGGAPEACETELWIIDDGKLPKHVLERYERQLGRAGIAYRYHRKEQPGLWLSRVKTVELAQGDIILFLDDDVELPSNYLNELMRTYEAYPQAAGVGGIAKGMSNSFMGTIRCLLSFQQSLSKGRLSLSGQSGSMYNWHKAKKTFKTQFFHGCNMSFRRDAILSLEPVPWLQSYSVGEDLLLSRIAMKSGPLYINPALTLLHHESPSSRDNMEQVTYMRVMNHIHLLRDEGAGPIGYAALYWTTLYQILREKPKKNHKAIQGYRRALKEIFSSTKEPVSGGQFSERNSKKTVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAG2</accession>
    <name>E3EAG2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ydeM3</name>
        <name evidence="8" type="ORF">PPSC2_21710</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373147.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58580">
        <property type="protein sequence ID" value="ADO58580"/>
        <property type="gene ID" value="PPSC2_21710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4620"/>
    <dbReference type="eggNOG" id="COG0641">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_3_0_9"/>
    <dbReference type="OMA" id="YYCAGGC"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023885">
        <property type="entry name" value="4Fe4S-binding_SPASM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023867">
        <property type="entry name" value="Sulphatase_maturase_rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43273">
        <property type="entry name" value="PTHR43273"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01384">
        <property type="entry name" value="thioether_bond_formation_requi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04085">
        <property type="entry name" value="rSAM_more_4Fe4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="1"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="351" mass="40919" checksum="1D72E1531F08DA4A" modified="2011-01-11" version="1">MNFTYWVTEDCNLKCKYCYVSKVPKMMSRETAAKAIDFTEKKLAANPLDPKDKIRIALHGGEPLLNYPIIRYLVEELKQKIHGEVSFRMTTNGTIYNQEILDYVSENIQLTISLDGKQESHDINRVYRNGKGSFNRVIETLDYINHQSHFFRVRMTVTPNNVSYFADNYIFLFEKGYPTVSFALDESNPNWNKELMKVYQKNLDEIFSYMVNKDIIKAQYFLYNFKNAYFRPRGTCDGCHSSFHISSAGNIYPCILAVGHEEFSMGDVFSDIIEHRLSNLDVINQKDQGDCTKCAMYNNCRSKMCKIINKIQTGNHYESSPVFCATQRIHYSIVKEYEYILKNFELLLSTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAN0</accession>
    <name>E3EAN0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_22770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373327.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4847"/>
    <dbReference type="EnsemblBacteria" id="ADO58788">
        <property type="protein sequence ID" value="ADO58788"/>
        <property type="gene ID" value="PPSC2_22770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4821"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OMA" id="NHIPTIF"/>
    <dbReference type="OrthoDB" id="170593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="473" mass="55129" checksum="294DD015398D900E" modified="2011-01-11" version="1">MENTTTIRSEIEKELKLGGYTFNSFGQATGLNRGIFSAMLNGNPPKPISVRQMDLITKALNYPEGWLYDLYVDECFYDGRPHWKRVKPFLIRCVEIGNLRCVEKVLSRLMEDLNHIPTIFALAEELYEEGKLQEAIPFYECVVENEKYQHSERLAISHYKLFVASIGQDLERNLEAVLRFIPYRNRLPENYHLDALLKLANIYFSLHQWKEVERYADELRNLATTVYKNEIQKRKNINKYRQLETERPLVVYYGQGYLLKGNALELQGMYEKAMEYIDGYADLGWFEGLDELGLEEVELLKLWAEANKLNLKVLMGEKGSLPSYVNFLKKNPLEVLPGLLTIVESAIKHKFSIDAVLSEFSEDIRVFNDSFSLDSGYYQLAPTVDRYADLHYKLAIYYLGNEKIDQGLDSILESLKFYKNINNKTKFVECVALFEKFRKDSTSQHRKNYEFIMEEILDDEKINDVLLVGTKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB12</accession>
    <name>E3EB12_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glycerate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">glxK</name>
        <name evidence="5" type="ORF">PPSC2_25055</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycerate kinase type-1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373825.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12550"/>
    <dbReference type="EnsemblBacteria" id="ADO59292">
        <property type="protein sequence ID" value="ADO59292"/>
        <property type="gene ID" value="PPSC2_25055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5309"/>
    <dbReference type="eggNOG" id="COG1929">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028255_0_1_9"/>
    <dbReference type="OMA" id="YTAVHEK"/>
    <dbReference type="OrthoDB" id="1292731at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008887">
        <property type="term" value="F:glycerate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031388">
        <property type="term" value="P:organic acid phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018193">
        <property type="entry name" value="Glyc_kinase_flavodox-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004381">
        <property type="entry name" value="Glycerate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018197">
        <property type="entry name" value="Glycerate_kinase_RE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036129">
        <property type="entry name" value="Glycerate_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21599">
        <property type="entry name" value="PTHR21599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02595">
        <property type="entry name" value="Gly_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006078">
        <property type="entry name" value="GlxK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110738">
        <property type="entry name" value="SSF110738"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00045">
        <property type="entry name" value="TIGR00045"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR006078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="381" mass="39718" checksum="E8050543AFD79F2A" modified="2011-01-11" version="1">MREKTFVLAPDSFKESMTAKEVCIAMEKGLRKVYPTAHYVHVPMADGGEGTVQSLVDATGGQLRYMEVTGPLGEPVNAAYGLLGDGTTAAIEMASASGIHLVNKDNKNPLKTTTYGTGELIRECLNQGIRKIIIGIGGSATNDGGTGMAEALGAKFLDAAGNPLPRGGGSLGELASIDISSLDDRLQQVQLIVACDVTNPLCGEHGASRVFGPQKGATPEMVQQLDANLAHYADMVKQQLGKDVRDLPGAGAAGGLGAGLLIFTQATLQKGIEIVIEYTGLKQKLATADIVLTGEGGIDFQTKFGKTPYGVAQAAKQSGKKVIAVAGYIGEGIDTLYKEGIDAVFGIVPGASELGKLLAEGPQNVERTCENIARVLQFNEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB69</accession>
    <name>E3EB69_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">PTS cellobiose transporter subunit IIB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lacEIICB</name>
        <name evidence="6" type="ORF">PPSC2_20790</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372970.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08035"/>
    <dbReference type="EnsemblBacteria" id="ADO58401">
        <property type="protein sequence ID" value="ADO58401"/>
        <property type="gene ID" value="PPSC2_20790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4434"/>
    <dbReference type="eggNOG" id="COG1440">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147323_2_1_9"/>
    <dbReference type="OMA" id="MSTKNIM"/>
    <dbReference type="OrthoDB" id="1846001at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003501">
        <property type="entry name" value="PTS_EIIB_2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013012">
        <property type="entry name" value="PTS_EIIB_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02302">
        <property type="entry name" value="PTS_IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
        <property type="entry name" value="SSF52794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51100">
        <property type="entry name" value="PTS_EIIB_TYPE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168771" evidence="4">
        <location>
            <begin position="25"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-3" evidence="5">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphocysteine; by EIIA" evidence="3">
        <location>
            <position position="8"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="10847" checksum="0A4529306943E805" modified="2011-01-11" version="1">MKQITLVCAAGMSTSMLVQKMQKAAQAQNLEVEIRATSEGSFKEYADKTDVLLIGPQVGYLEDDFKAKYEPKGIKVSVINIVDYGMMNGEKVLGDALKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB85</accession>
    <name>E3EB85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">RNA polymerase sigma factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">sigE5</name>
        <name evidence="8" type="ORF">PPSC2_20870</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372986.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4468"/>
    <dbReference type="EnsemblBacteria" id="ADO58417">
        <property type="protein sequence ID" value="ADO58417"/>
        <property type="gene ID" value="PPSC2_20870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4451"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_4_9"/>
    <dbReference type="OMA" id="NEIYMQM"/>
    <dbReference type="OrthoDB" id="1914729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="6">
        <location>
            <begin position="24"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4" evidence="7">
        <location>
            <begin position="126"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="191" mass="23225" checksum="2610C7ACBFABBAD5" modified="2011-01-11" version="1">MQSESMYHVLTKMIEGDQQAFHTLYDATYKDVYRTVSFLVDHPQDREDIMNEIYMQMWTSLPNYDPNRPFHFWLHGLVIRQVQRFRVKSWRRFRIFERIRVFSREERHWDQTTVRTDGTDPEISKAMHKLTDKQRTVIILRFYHDYRLEEIATLLDIPLGTVKSRYHAGLQSLRKHLGNLSLERMEKNNAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBD6</accession>
    <name>E3EBD6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Deoxyribose-phosphate aldolase</fullName>
            <shortName evidence="3">DERA</shortName>
            <ecNumber evidence="3">4.1.2.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">2-deoxy-D-ribose 5-phosphate aldolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Phosphodeoxyriboaldolase</fullName>
            <shortName evidence="3">Deoxyriboaldolase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">deoC</name>
        <name evidence="4" type="synonym">dra</name>
        <name evidence="4" type="ORF">PPSC2_21860</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>2-deoxy-D-ribose 5-phosphate = acetaldehyde + D-glyceraldehyde 3-phosphate</text>
            <dbReference type="Rhea" id="RHEA:12821"/>
            <dbReference type="ChEBI" id="CHEBI:15343"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="ChEBI" id="CHEBI:62877"/>
            <dbReference type="EC" id="4.1.2.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.4" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373177.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09005"/>
    <dbReference type="EnsemblBacteria" id="ADO58610">
        <property type="protein sequence ID" value="ADO58610"/>
        <property type="gene ID" value="PPSC2_21860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4650"/>
    <dbReference type="eggNOG" id="COG0274">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053595_0_1_9"/>
    <dbReference type="OMA" id="MNACIPP"/>
    <dbReference type="OrthoDB" id="1227369at2"/>
    <dbReference type="UniPathway" id="UPA00002">
        <property type="reaction ID" value="UER00468"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004139">
        <property type="term" value="F:deoxyribose-phosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016052">
        <property type="term" value="P:carbohydrate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009264">
        <property type="term" value="P:deoxyribonucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046386">
        <property type="term" value="P:deoxyribose phosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00959">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00114">
        <property type="entry name" value="DeoC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011343">
        <property type="entry name" value="DeoC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002915">
        <property type="entry name" value="DeoC/FbaB/LacD_aldolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028581">
        <property type="entry name" value="DeoC_typeI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10889">
        <property type="entry name" value="PTHR10889"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10889:SF1">
        <property type="entry name" value="PTHR10889:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01791">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001357">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01133">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00126">
        <property type="entry name" value="deoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0704">Schiff base</keyword>
    <feature type="active site" description="Proton donor/acceptor" evidence="3">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with acetaldehyde" evidence="3">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="3">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="22851" checksum="F8F9DEB50A377CF5" modified="2011-01-11" version="1">MNIAALIDHTLLRADAMKDEITKLTAEAKKYQFASVCVNPAWVAYAAEQLAGTNVAICTVIGFPLGANTSATKAFETKDAIANGATEIDMVINIGALKARDVQLVEQDIRAVVEAAAGTLVKVIIETCLLTDEEKVLACELSVKAGANFVKTSTGFSTGGATVEDVALMRKTVGPDIGVKASGGVRSLEDVQKLVEAGASRIGASSGVKIIEGEQSTSSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBP9</accession>
    <name>E3EBP9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yerP3</name>
        <name evidence="2" type="ORF">PPSC2_23115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373405.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10600"/>
    <dbReference type="EnsemblBacteria" id="ADO58867">
        <property type="protein sequence ID" value="ADO58867"/>
        <property type="gene ID" value="PPSC2_23115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4896"/>
    <dbReference type="eggNOG" id="COG0841">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002755_1_2_9"/>
    <dbReference type="OMA" id="GDNVIFW"/>
    <dbReference type="OrthoDB" id="38744at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="334"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="357"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="382"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="427"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="459"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="528"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="859"/>
            <end position="878"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="885"/>
            <end position="907"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="913"/>
            <end position="933"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="964"/>
            <end position="986"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="992"/>
            <end position="1015"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1038" mass="113803" checksum="B54454D44CA871A5" modified="2011-01-11" version="1">MIEYIVKKRKITLLFFVMLIVVGTFGFFQLPQQEMPDVTIQNATVTTVYPGASPQKVEQTVTKELEKRIKEVEGVKTINSTSGNGFSSILIESKNGVDPQTVWDNMRKKVQDAQADLPQGAEVPVINDKLTSSFIGSYALTADSSAPLYKLNDLTTTWKDQLNTISGVSSVKFNGLPDQEVRIHIDNQKLQQYQLSWGQVAQAIQSQIDRVPTGNIEYNGRTYQLVVRETEKADELNQVILTRTKEGNPVYLRDIGTTELAHPEAEYFAYVEGKPAITLSIGAETGTDIPSMSAKVNSKLKELEKTLPAGVHLQTLFAQKDQVSHIFDDLKRETILAIAAVILVCMLGLNLLTSAFVALAIPISVSIAVIFLPMFGITLNQISVVGLIIVLGILVDDAVVVNDNIERRLTELGEPPSVAAIKGTKEVMLSILIATLATISAFAPLLFLPGNVGAFIRPIPTIVSLAMLASMIMSLTIIPIFREWYEKRRQTLHPQRKSKPVGLLGQQIHSLNKLYSQKLMPKVIQRPLLTAMVGLMLGTAAYGLVPFTSVELFPESEDPHVALNVKMPVGTSIAETDQVVKDLAGWIKKQPETSNVVYSAGGTAPQLFSDINSAGGTISYNETVGQIAVVGKENVFDLNSTVDAWEQHVKKSYPGVTVTMYVPRLGIPVGKPVSIRISGQDLNELQTLAQKAKEQIATVEGTTGIVDDIGIERYALELEVNKQAMDQYLVSYTDLTRTLLLLKEGAQVSQFDTGNSLVDIKMYLNHSNEEPSKLFQQLSVVNAAGKQIPLNQLVQIKPSFAIQQIKHYNMERTITVEADLNGRTASEAMVDVEGKLAQMRFPEGYKWEVGGETSDQSTIFGDLGKLAIVVVLLILLLITMQFYSLSIPIIIMTTVYLAAAGGIIGIFLTGMPIGFMSIMGIIALAGIVVRNGIVLIEFIEDARHEGVELREAVIQAAAARFRPILLTSLAAIVGMIPLALLGSLLFKPLAFTVIFGLLFSTLLTLFVVPSLYMIMAKYKMHRQLKKQQHTVITRDQPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ6</accession>
    <name>E3EBQ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">RNDmfp</name>
        <name evidence="6" type="ORF">PPSC2_23150</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373412.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10635"/>
    <dbReference type="EnsemblBacteria" id="ADO58874">
        <property type="protein sequence ID" value="ADO58874"/>
        <property type="gene ID" value="PPSC2_23150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4903"/>
    <dbReference type="eggNOG" id="COG0845">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_14_4_9"/>
    <dbReference type="OMA" id="GQLMAIH"/>
    <dbReference type="OrthoDB" id="1432684at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169044" evidence="3">
        <location>
            <begin position="29"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="4">
        <location>
            <begin position="63"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="5">
        <location>
            <begin position="168"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="188"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="448" mass="46828" checksum="CE38A3FD25B754A1" modified="2011-01-11" version="1">MNKKSALIATTLLLSVALAGCGGGEAPAAPASVQKAIPVQVAKAAKGSINDSTGIIGSFAPKETAQVSPKISGKIQSINLTVGQKVNKGDTLFTIDQKDIQDSIKQSQESYQVALANLKQAESGAAQSVQQSESSVDQAKSALVQQDNSITQAQTSLLDAQNSVRDAQNTLNRNQQLFSVGALSQSELEQSQIAYRKAQTAVENAQIALHNAQTSKESAQTTYNNAQKSLRLAQQKTGIDVARASVNQAKASLDTARSQLVDAVVKAPISGTISVVTGVQGQMVSAQSAVVTIANTNPIIAKVNVSESELLKMQVGSSVTVGVDSLDKRIEARVSAVNPVMDNDLKAYPVEISVPNGSGELKSGMVVTVYMKTEAPKNILVSQDAVTEQAGKKYAYVVEGTVAKRVEVQTGQESAKQVEVTKGLAEGQNVVVKGVSLLSDGAKINVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW7</accession>
    <name>E3EBW7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373626.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5153"/>
    <dbReference type="EnsemblBacteria" id="ADO59091">
        <property type="protein sequence ID" value="ADO59091"/>
        <property type="gene ID" value="PPSC2_24155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5114"/>
    <dbReference type="eggNOG" id="ENOG50343QY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094135_0_0_9"/>
    <dbReference type="OMA" id="GSVEFPM"/>
    <dbReference type="OrthoDB" id="1380351at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="189"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="29437" checksum="48E20655C2E04E0E" modified="2011-01-11" version="1">MLGIWHSEMERIWKRKSTYSLYVAYILIIVAIIWSYKMTGTKIFRFGEGTMLVNNLNLPWLMMSEVALFLTLAMLPILYVDQLSGDLYSGAYRLYMLRPYRRLQFWLAKMLALSVTTVIFVGTGLFISVIAGWFLFPHSSTFLKYGASTPSTSSDTITYILAFYLILFIVCLVKLMLSSAVCLFISRPLFAYLSILVLSAFLFKLSRPLIMLMDPFREILLALRVQNSFEFWVCTGGMLVVCIIISCVRWQKRIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBZ3</accession>
    <name>E3EBZ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Alpha-amylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">amyL</name>
        <name evidence="8" type="ORF">PPSC2_24270</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373652.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EBZ3"/>
    <dbReference type="STRING" id="1406.LK13_11790"/>
    <dbReference type="CAZy" id="GH13">
        <property type="family name" value="Glycoside Hydrolase Family 13"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59117">
        <property type="protein sequence ID" value="ADO59117"/>
        <property type="gene ID" value="PPSC2_24270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5139"/>
    <dbReference type="eggNOG" id="COG0366">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024572_2_0_9"/>
    <dbReference type="OMA" id="FFHWYYP"/>
    <dbReference type="OrthoDB" id="99080at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013776">
        <property type="entry name" value="A-amylase_thermo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001021">
        <property type="entry name" value="Alph-amls_thrmst"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="7">
        <location>
            <begin position="5"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001021-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001021-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="497" mass="57151" checksum="89B4CDF2DB1A97FA" modified="2011-01-11" version="1">MKRNHTMMQFFEWNVKADGSHWKKLARLAPELKAKGIDAIWIPPVTKGQSPEDTGYGVYDLYDLGEFDQKGAVRTKYGTREDLLEAVASCVRHGVAVYVDLVMNHKAGADETEVFKVVEVNPDNRNEVISEPFDIEGWTKFTFPGRQGKYSTFQWNFEHFNGTDYDASQDRTGIYRILGKNKNWSDNVDDEFGNYDYLMFANIDYNHQDVRKEMIRWGKWLVDTLQCNGFRLDAIKHINHEFVREFATEMIKKRGQDFYMVGEFWKPDLESCQKFLDTIDYKIDLFDVSLHYKLHSASLGGKDFDLSTIFEDTLVHTHPLNSVTFVDNHDSQPHEALESWVEDWFKPSAYALILLRKDGYPCVFYGDYYGIQGQTPVEGKQAELDPLLYARYHKAYGEQKDYFDDPHTIGWVRQGIPELHGSGCAVVITNANDGEKRMFVGKQRAGEKWTDLTGHHDHTIKIEQDGYGIFPVRAGSVSVWALPTEEDSLDAEDTASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC12</accession>
    <name>E3EC12_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YycH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yycH</name>
        <name evidence="2" type="ORF">PPSC2_25325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373885.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12820"/>
    <dbReference type="EnsemblBacteria" id="ADO59352">
        <property type="protein sequence ID" value="ADO59352"/>
        <property type="gene ID" value="PPSC2_25325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5368"/>
    <dbReference type="eggNOG" id="COG4853">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078250_0_0_9"/>
    <dbReference type="OMA" id="MDWGRAK"/>
    <dbReference type="OrthoDB" id="2049648at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018604">
        <property type="entry name" value="YycI-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09648">
        <property type="entry name" value="YycI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YycI" evidence="1">
        <location>
            <begin position="157"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="28719" checksum="6F5259EC509EAF12" modified="2011-01-11" version="1">MDWSRAKNVLICTFLLLNVVLGYQLWHDAQETAGPNLDFTSLDENTQRLMEEKSIQVLAPIPGDTPQLPKLSYTYVHSGEKDELVQLLRPVDSKLVFTHDALVEALEPQIKDIDSYQYDPLDVQEELVSGQADAFVLHPLVQGKWPLFNVKLALFYSNQKITGYRKIQVELQPSDEAKKMLPASKALARLIDGYLPRDSVVKDIRLGYYGQTFNSDSQVAAPVWRFMLDNGKGVYYVQMNGDVISPKTEHTEGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC29</accession>
    <name>E3EC29_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">oppD9</name>
        <name evidence="7" type="ORF">PPSC2_25405</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373902.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12900"/>
    <dbReference type="EnsemblBacteria" id="ADO59369">
        <property type="protein sequence ID" value="ADO59369"/>
        <property type="gene ID" value="PPSC2_25405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5384"/>
    <dbReference type="eggNOG" id="COG0444">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_23_9"/>
    <dbReference type="OMA" id="THHPGRK"/>
    <dbReference type="OrthoDB" id="1101128at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="6"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="42"/>
            <end position="49"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="36642" checksum="993B55A00D6D16F0" modified="2011-01-11" version="1">MENALIEFRNLKTHFHTSNGTVKAVNDVSFKIREGETLCVVGESGCGKSVTAMTMMRLIDSPHTSDGQIWFEGKDLLKLNKGQMQQIRGNDISIIFQEPMSSLNPVLTIGEQITEPLLMHTLMSKKEARARAIELINLVGISRSEEIFHSYPHELSGGMRQRIMIAIALSCNPKLLIADEPTTALDVTIQAQILDLMRDLKDKLKTSIMLITHDLGVVAEMADYVVVMYAGNVIEEAPVIELFKNPQHPYTQGLLKAKPVINQKMDRLYSIPGQVPNPIELGENCHFHDRCAHCMQICKDQAPPLNEKENGHKVACWLYEKEGGQRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECK2</accession>
    <name>E3ECK2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypeA</name>
        <name evidence="2" type="ORF">PPSC2_03930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369410.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16735"/>
    <dbReference type="EnsemblBacteria" id="ADO54774">
        <property type="protein sequence ID" value="ADO54774"/>
        <property type="gene ID" value="PPSC2_03930"/>
    </dbReference>
    <dbReference type="GeneID" id="66574191"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.781"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_34_1_9"/>
    <dbReference type="OMA" id="FARQLSW"/>
    <dbReference type="OrthoDB" id="1390922at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017255">
        <property type="entry name" value="AcTrfase_GNAT_prd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037663">
        <property type="entry name" value="Acetyltransf_GNAT_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="15793" checksum="67CC00DB4F6F4759" modified="2011-01-11" version="1">MHVRSFQLSDVNSVTELMQIALSEECYKETVGAFARQLSWDSGLIVVAEEEGEIVGALIGTIDQNHGCYYRIAIHPDHRRMGIGKSLVESMEQRFQQRKVSRIWVAGDKHNSAAMPLYEAMGYGASQILQAFQKLSILAPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS6</accession>
    <name>E3ECS6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA ligase (ATP)</fullName>
            <ecNumber evidence="1">6.5.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lig</name>
        <name evidence="4" type="ORF">PPSC2_01885</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.5.1.1" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54370.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14650"/>
    <dbReference type="EnsemblBacteria" id="ADO54370">
        <property type="protein sequence ID" value="ADO54370"/>
        <property type="gene ID" value="PPSC2_01885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.379"/>
    <dbReference type="eggNOG" id="COG1793">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008325_4_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003910">
        <property type="term" value="F:DNA ligase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012309">
        <property type="entry name" value="DNA_ligase_ATP-dep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012310">
        <property type="entry name" value="DNA_ligase_ATP-dep_cent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04679">
        <property type="entry name" value="DNA_ligase_A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01068">
        <property type="entry name" value="DNA_ligase_A_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50160">
        <property type="entry name" value="DNA_LIGASE_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_LIGASE_A3" evidence="3">
        <location>
            <begin position="105"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54370.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="316" mass="36565" checksum="723244E29390E2B9" modified="2015-05-27" version="2">MKPVIPFEPELSEKVPVDVGLWRYEIKWDGTRILTYHDQGSTRLFNRKQHERTLLYPELAHFSSYCRADSVILDGEMIALGADGKPSFHEIMRRDLIRRTDRIQAAYTAVPATYMLFDIVYLNGEWVHRKPLQERLELLHQIIIPNERIQLAPAHPDGQALFQVMCSQGMEGIVCKKLDSPYTLGGQDRRWVKVKNYGDIIAVIGGYTLNGGVINAVLLGQYDRQGMLRYIGHVGTGKLTRGDWRQLTERLLPHTISERPFINKPDRHQDAFWVKPMFTAKIQYSEWRWQEGRTLRQPSIQALVDQGIEQCIGPWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECT4</accession>
    <name>E3ECT4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Putative N-acetylmannosamine-6-phosphate 2-epimerase</fullName>
            <ecNumber evidence="6">5.1.3.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">ManNAc-6-P epimerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">nanE</name>
        <name evidence="7" type="ORF">PPSC2_01925</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 6">Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>an N-acyl-D-glucosamine 6-phosphate = an N-acyl-D-mannosamine 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:23932"/>
            <dbReference type="ChEBI" id="CHEBI:57599"/>
            <dbReference type="ChEBI" id="CHEBI:57666"/>
            <dbReference type="EC" id="5.1.3.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 6">Amino-sugar metabolism; N-acetylneuraminate degradation; D-fructose 6-phosphate from N-acetylneuraminate: step 3/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 6">Belongs to the NanE family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.9" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369018.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14690"/>
    <dbReference type="EnsemblBacteria" id="ADO54378">
        <property type="protein sequence ID" value="ADO54378"/>
        <property type="gene ID" value="PPSC2_01925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.387"/>
    <dbReference type="eggNOG" id="COG3010">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086300_1_0_9"/>
    <dbReference type="OMA" id="TRPMEIT"/>
    <dbReference type="OrthoDB" id="1710586at2"/>
    <dbReference type="UniPathway" id="UPA00629">
        <property type="reaction ID" value="UER00682"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047465">
        <property type="term" value="F:N-acylglucosamine-6-phosphate 2-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009385">
        <property type="term" value="F:N-acylmannosamine-6-phosphate 2-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006051">
        <property type="term" value="P:N-acetylmannosamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019262">
        <property type="term" value="P:N-acetylneuraminate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04729">
        <property type="entry name" value="NanE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01235">
        <property type="entry name" value="ManNAc6P_epimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007260">
        <property type="entry name" value="NanE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36204">
        <property type="entry name" value="PTHR36204"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04131">
        <property type="entry name" value="NanE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="25442" checksum="0FB8A0F325F6D88B" modified="2011-01-11" version="1">MGMEGVLSKVRHGLIVSCQALPGEPLHGADSMVKMARAAQEGGAVAIRANGASDVRAIKQAIPLPVIGLIKRDYNDSDIYITPTLREMEELVEAGADIIALDATLRPRPAGCKLKHLIDYAHEHGVASMADISTLEEALHAASLGIGCVSTTLSGYTPYSTQIEGPDLELVRRASELVPVPVIAEGRIHDPAQVEEAFRLGAHAVVVGSAITRPQLITQRFADAARKAVKCIYGDERPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED75</accession>
    <name>E3ED75_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ecf-type sigma factor negative effector</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-585</name>
        <name evidence="3" type="ORF">PPSC2_02315</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369072.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15080"/>
    <dbReference type="EnsemblBacteria" id="ADO54432">
        <property type="protein sequence ID" value="ADO54432"/>
        <property type="gene ID" value="PPSC2_02315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.441"/>
    <dbReference type="eggNOG" id="ENOG502ZCC4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1101994_0_0_9"/>
    <dbReference type="OrthoDB" id="1537184at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3950.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022019">
        <property type="entry name" value="DUF3600"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038267">
        <property type="entry name" value="ECF_sigma_eff"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12207">
        <property type="entry name" value="DUF3600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3600" evidence="2">
        <location>
            <begin position="67"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="247" mass="29190" checksum="6E9BE0129F6F1318" modified="2011-01-11" version="1">MKLEQELRKVMQHEDNHLSPPIELKENIMIQIERIKGKGSKPMKKYIVTTILVAALLIPTGAFAAYSYLTDTLYGSQEKLIEMGGTAQEYTRVESKLQQAQGRLSKEEFSVFMELLKELGAYNLKITDKNGMLHKERLSVDEQREYNRITAELEPYFDKLNQEEFQTHKSIDLQDELDYAKKALSKDEFVKFRVLFTEFYKYVPRITGENGVLYPDRLPEREREDYEEHLRLLQPYFDQFNSLEKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="79" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDD9</accession>
    <name>E3EDD9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Bifunctional protein FolD</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="6">Methylenetetrahydrofolate dehydrogenase</fullName>
                <ecNumber evidence="6">1.5.1.5</ecNumber>
            </recommendedName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="6">Methenyltetrahydrofolate cyclohydrolase</fullName>
                <ecNumber evidence="6">3.5.4.9</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="6" type="primary">folD</name>
        <name evidence="9" type="synonym">folD1</name>
        <name evidence="9" type="ORF">PPSC2_04590</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADP(+) = 5,10-methenyltetrahydrofolate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:22812"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>5,10-methenyltetrahydrofolate + H2O = (6S)-10-formyltetrahydrofolate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="EC" id="3.5.4.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.5" evidence="6"/>
    <dbReference type="EC" id="3.5.4.9" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369551.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17485"/>
    <dbReference type="EnsemblBacteria" id="ADO54918">
        <property type="protein sequence ID" value="ADO54918"/>
        <property type="gene ID" value="PPSC2_04590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.922"/>
    <dbReference type="eggNOG" id="COG0190">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034045_2_1_9"/>
    <dbReference type="OMA" id="ATPQSCI"/>
    <dbReference type="OrthoDB" id="1449514at2"/>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004477">
        <property type="term" value="F:methenyltetrahydrofolate cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004488">
        <property type="term" value="F:methylenetetrahydrofolate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006164">
        <property type="term" value="P:purine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01080">
        <property type="entry name" value="NAD_bind_m-THF_DH_Cyclohyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01576">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000672">
        <property type="entry name" value="THF_DH/CycHdrlase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020630">
        <property type="entry name" value="THF_DH/CycHdrlase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020631">
        <property type="entry name" value="THF_DH/CycHdrlase_NAD-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00763">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02882">
        <property type="entry name" value="THF_DHG_CYH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00085">
        <property type="entry name" value="THFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="5 6" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="3 6" id="KW-0521">NADP</keyword>
    <keyword evidence="1 6" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 6" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="THF_DHG_CYH" evidence="7">
        <location>
            <begin position="5"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="THF_DHG_CYH_C" evidence="8">
        <location>
            <begin position="129"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="164"/>
            <end position="166"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="31072" checksum="4E77D3D626BA70B2" modified="2011-01-11" version="1">MAIIMKSKEAAEQVYATIRSQVEQMKQQGHRPHLATLLVEGDPASAYYARTKQKIAEKLGISFHLHTFNRHVSEAELLHLIGTLNDASHVHGIMLELPLPQHLSASVIKQSIAPYKDIDGITPDNKLATVTGDAGLYPATPQACIELLKHYGHSLAGKNVTLVGIGQTVGLPLFHMLQRENATVTACHAGTRDIAEHLNHADIAFVAVGCPDVITQDMVHPGLILVDAGINETLEGKIVGDAAPDVVEKVHAISPVPGGVGTLTTAILYKNLLKAIRLQHYSREVVYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE8</accession>
    <name>E3EDE8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Metallophosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hint</name>
        <name evidence="4" type="ORF">PPSC2_04630</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="3">Binds 2 manganese ions per subunit.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369560.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17525"/>
    <dbReference type="EnsemblBacteria" id="ADO54927">
        <property type="protein sequence ID" value="ADO54927"/>
        <property type="gene ID" value="PPSC2_04630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.930"/>
    <dbReference type="eggNOG" id="COG1690">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022279_1_0_9"/>
    <dbReference type="OMA" id="QQYARWN"/>
    <dbReference type="OrthoDB" id="1384936at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008452">
        <property type="term" value="F:RNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001233">
        <property type="entry name" value="RtcB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036025">
        <property type="entry name" value="RtcB-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01139">
        <property type="entry name" value="RtcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103365">
        <property type="entry name" value="SSF103365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0464">Manganese</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="GMP-histidine intermediate" evidence="1">
        <location>
            <position position="315"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="256"/>
            <end position="257"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="256"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="288"/>
            <end position="291"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="295"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="315"/>
            <end position="318"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR601233-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR601233-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR601233-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="408" mass="44589" checksum="83D9FD52AB01DB76" modified="2011-01-11" version="1">MAYQEINGVRVWGAPDPGALSQARTCAENGNVIQALLMADHHKGYSQPIGGVMVYDGQISPSGVGYDIGCGNKAVRTKLSAADIMPRISTVMDEIARQISFGVGRVNEIQVDHELFDDPDWAVYAAIGKQEHDKLKSLAREQLGTVGSGNHFVDVFVEEATGQVWIANHFGSRGFGHKTASGFLNLAAGREFLGKAPGEHMDQPPVLLDMNSELGDMYYRAMRLAGRYAYAGRDHVIEQVLGIMGTEADFTVHNHHNYAWKEQHDGRDTIVVRKGATPSAPGQMGFIGGSMGDISVIVRGKDSVENRDSYYSTVHGAGRIMSRTQAAGKMNWKTRTRSGGQITDLQMKEAVRNYGVELRGAGTDESPFVYRKLREVLDAHSETVEVMHVLKPIGVCMAGANEFDPYKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDU4</accession>
    <name>E3EDU4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Initiation-control protein YabA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yabA</name>
        <name evidence="4" type="ORF">PPSC2_00110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in initiation control of chromosome replication.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Interacts with both DnaA and DnaN, acting as a bridge between these two proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the YabA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368663.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13125"/>
    <dbReference type="EnsemblBacteria" id="ADO54010">
        <property type="protein sequence ID" value="ADO54010"/>
        <property type="gene ID" value="PPSC2_00110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.21"/>
    <dbReference type="eggNOG" id="COG4467">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_157169_0_0_9"/>
    <dbReference type="OMA" id="TEGDCLF"/>
    <dbReference type="OrthoDB" id="2060683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01159">
        <property type="entry name" value="YabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010377">
        <property type="entry name" value="YabA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06156">
        <property type="entry name" value="YabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021439">
        <property type="entry name" value="DUF972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="24"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="124" mass="14292" checksum="FB7BD307718D1B43" modified="2011-01-11" version="1">MDKLNVFARIHEMETQMGQLHSDLGELKLAVKELLEENQRLTIENEQVRKMLKRETSGEEKTASKPKLPPPIVVKDEEETGEVVGEGYDNLARLYHEGFHICNVYYGHLRTEGDCLFCLSFLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDX6</accession>
    <name>E3EDX6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Stage II sporulation protein E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spoIIE</name>
        <name evidence="4" type="ORF">PPSC2_00265</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54042.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13280"/>
    <dbReference type="EnsemblBacteria" id="ADO54042">
        <property type="protein sequence ID" value="ADO54042"/>
        <property type="gene ID" value="PPSC2_00265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.52"/>
    <dbReference type="eggNOG" id="COG2208">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017349_0_0_9"/>
    <dbReference type="OMA" id="HNTPKWA"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014221">
        <property type="entry name" value="SpoII_E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045768">
        <property type="entry name" value="SpoIIE_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07228">
        <property type="entry name" value="SpoIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19732">
        <property type="entry name" value="SpoIIE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02865">
        <property type="entry name" value="spore_II_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="102"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="132"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="199"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="230"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="262"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="domain" description="PPM-type phosphatase" evidence="3">
        <location>
            <begin position="599"/>
            <end position="809"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="495"/>
            <end position="522"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54042.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="834" mass="92996" checksum="4DD5B54AAD104A18" modified="2015-05-27" version="2">MEKWNVVHFPGLKSRKSKSKERTEGWPSRLKKRLNSHKVVQWVTAQRWMLLLSAMGVLLGRATILDELSPFALAYFAVITFLRRDLMLPVAVSVVLGSLLAPYPSLFMIGGELIVFYLLYRGLRTFDRLELSYAPLMVFLSVFMVNLFNAVMAPAFTWYELVIVGTDAVLSFMLTLVFTQAIPLFTYRKKASQLKNEEILCLIILLASVMTGAVGWTVHSLSVDHVLSRYLVLVFALVGGASLGASVGVITGLILSLANMSAIVQMSLLAFAGLLAGMLREGRKGAVALGMLLGSSILTIYLDGTGDVLTSTWESCAAILLFLMTPKSFFKAVSTYVPGTQDHAKSQHEYAKRVRDLTAERVTKFSRVFSQLSRSFHQISASEGAKSDGEIEHFMNAVAEGTCASCFKCEQCWDGKFMQTHQYMTEMMSAIEDNPDLEPEQMPPQWSKACAKTGAVLQVMKQQYSLYQHNMQWKRQVYDSRQLVADQLSGVSQIMEDLAREIQREGQTMHRQEEQIREALDRLGLSIQSIEIISLDAGQVEIEIVHAYTRGFDECRKIIAPLLSDILDEHIAVMRETAADRRQGLATVMFGSAKTYEIATGVASAAKGGDFFSGDSYSMMELGNGTFAVSLSDGMGNGERAQQESSAALNILEELLQSGMDEKLAIKSVNSVLMLRSPEEMYATVDMALIDQYTARTTFMKIGSTPSFIKRGEEVIPVSASNLPIGIIQDIEVDLVSLQLQPGDILIMITDGIYDSPGYAVNKEIWMKRMIQEIESEDPQQLADCLLERVIRYQQNQIYDDMTVVVSKIDHFHPEWATLHVPGMRWLERPRTVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE89</accession>
    <name>E3EE89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ydeD</name>
        <name evidence="4" type="ORF">PPSC2_05040</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369645.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17920"/>
    <dbReference type="EnsemblBacteria" id="ADO55012">
        <property type="protein sequence ID" value="ADO55012"/>
        <property type="gene ID" value="PPSC2_05040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1017"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033863_19_0_9"/>
    <dbReference type="OMA" id="RKFPASM"/>
    <dbReference type="OrthoDB" id="1515911at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="77"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="101"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="221"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="252"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="276"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="8"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="3">
        <location>
            <begin position="159"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33561" checksum="7024E796343ABD5D" modified="2011-01-11" version="1">MDKSTRRTGLFLVITGAIFWGISGTVAKKLFLQIDVNWLVTTRLLIAGVLLLALQFTIKDRTQIWGVWKNRKTAFQLIVYGLVGMLAVQYTYMASIQSGNAAVATLLQYLAPVMIIIYLVLRKHLVFTRKDLSAIFLALVGCFFLLTNGSISQLSVPKIAIVWGLLSAIALAFYTLYAIPLLKQYDSLVIVGWAMVIGGFGLSLIHPPWQIDFKSLTLETYLYLAFVIIFGTMIAFWFYIESLQSLSPKETSFLSSLEPLAAVLTTVFWLKEPFGFFQWIGVLCIIGLILLLAFNKKSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEL5</accession>
    <name>E3EEL5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Endospore coat-associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yheC3</name>
        <name evidence="2" type="ORF">PPSC2_08170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370325.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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        <property type="gene ID" value="PPSC2_08170"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.1718"/>
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_0_0_9"/>
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    <dbReference type="OrthoDB" id="878336at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="367"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="373"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="392" mass="45783" checksum="C79192E1C5E9A307" modified="2011-01-11" version="1">MPKPVLGIMTLYLNSKKQLEERDIYERMIAEGKRLGLDMYVFTPADVHKDRRLLLAQIYDPHSDKWTRKWREFPDMIFDRCRVQRSERYRQLKKFRLQYTDLVYLNRPLSNKWAIHQQLARKAAFRPHLPATEPFDGFHSVKRMLKQNSLVYLKPINGTGGRGILRIEPVNKQSGLYLIEGRNRKRHIIPQQRVRLDRLEPRLSSWNMDNYIVQEGIPVQLPNGRVHDYRMLVQKNSQGVWELTGCAGRIGAHRSVTSNLHGGGKAVPMKQLLTQWIRDEDQREKIIKQGEKLGLDIAAYLEESYGALCELALDLAINKDGHIYVLEVNPKPAREVFSRIGEKETYRRAITKPMEYALWVYHTQINPKPQTEQKTEEQTEDKTESKAKEGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EER6</accession>
    <name>E3EER6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Fe-S oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_08410</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21015"/>
    <dbReference type="EnsemblBacteria" id="ADO55753">
        <property type="protein sequence ID" value="ADO55753"/>
        <property type="gene ID" value="PPSC2_08410"/>
    </dbReference>
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    <dbReference type="OMA" id="YCYGLIK"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023885">
        <property type="entry name" value="4Fe4S-binding_SPASM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034391">
        <property type="entry name" value="Cmo-like_SPASM_containing"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13186">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01387">
        <property type="entry name" value="BtrN-like_SPASM_domain_contain"/>
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    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="5">
        <location>
            <begin position="2"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="33380" checksum="8024AF88D4C55B8F" modified="2011-01-11" version="1">MLKTFKKVYIEITSICNLACSFCPQTQRVKKFIDPEVFRNVLDQVKPHTDYIYLHVKGEPLLHPKIDLLLESAHEKGLKVNITTNGTLLPKTGHKLLGQPALRQMNFSLHSFDGHEGSVDREGYLGHIFTFVREAVKHNIIISFRLWNLTQDNLTNVQRQRNRETLEQLEQEFGLDYRIEEKVIPGSGVKIAPNVYLNQDYEFEWPSLSAPEDDGKGFCHALRSQAAVLVDGTVVPCCLDGEGVINLGNVHEQTFSEIVEGERANRLYFGFSRREAVEELCRKCGYRKRFGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEU9</accession>
    <name>E3EEU9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-hydroxymyristoyl/3-hydroxydecanoyl-(Acyl carrier protein) dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fusB</name>
        <name evidence="1" type="ORF">PPSC2_00410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368718.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13425"/>
    <dbReference type="EnsemblBacteria" id="ADO54072">
        <property type="protein sequence ID" value="ADO54072"/>
        <property type="gene ID" value="PPSC2_00410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.82"/>
    <dbReference type="eggNOG" id="COG0764">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078912_1_2_9"/>
    <dbReference type="OMA" id="LISINEW"/>
    <dbReference type="OrthoDB" id="1763197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013114">
        <property type="entry name" value="FabA_FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30272">
        <property type="entry name" value="PTHR30272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07977">
        <property type="entry name" value="FabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="15341" checksum="C05D3A5F68EE66AE" modified="2011-01-11" version="1">MSEELIRIEDVLPHRYPFLLLDGVTGYETSQWAKGYKLVTRSEWFITEANPYMPPMLIVESLAQLAAFAAIDKRGISYLTNLNGVRFHSFAKPGDRIDLYFEVVKRRRGYILGSGRATVGDRLVAEAEEIVSLDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEX8</accession>
    <name>E3EEX8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglycerate mutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gpmA1</name>
        <name evidence="1" type="ORF">PPSC2_00570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368746.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0114"/>
    <dbReference type="EnsemblBacteria" id="ADO54101">
        <property type="protein sequence ID" value="ADO54101"/>
        <property type="gene ID" value="PPSC2_00570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.112"/>
    <dbReference type="eggNOG" id="COG0406">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033323_12_2_9"/>
    <dbReference type="OMA" id="KHFDHTI"/>
    <dbReference type="OrthoDB" id="1122642at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="181" mass="21216" checksum="24433A0946F66A6C" modified="2011-01-11" version="1">MKKIYFVRHAQATGQEPDARLTDEGKRQAEQLADFMENVGVEYIVSSPWKRAVRTIQPLAERRHLQVYTDLRLQERVLCRDHLDHWLDVLEQTYLDEDLKLEGGESSREAADRGIQLVQELIERAEKTVIIVTHGALLSLLIRHYDPQFGFEEWKKLSNPDVYLLELNEAEAKIHRVWNID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEZ1</accession>
    <name>E3EEZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yfiB1</name>
        <name evidence="10" type="ORF">PPSC2_00625</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54114.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885839.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0127"/>
    <dbReference type="EnsemblBacteria" id="ADO54114">
        <property type="protein sequence ID" value="ADO54114"/>
        <property type="gene ID" value="PPSC2_00625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.123"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="133"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="157"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="237"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="272"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="16"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="339"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="373"/>
            <end position="380"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO54114.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="583" mass="63629" checksum="92AC49B292FDE3EB" modified="2015-05-27" version="2">MLKFAVFLKPYKKETILGPLFKLIEAILELLLPTMVALMINHGVGKGDTHYVWQMGLLMLLMTILGFGSSLVCQFYAARASQGFGTTLRNTMFKHISSFSYADLDKFGTPSLINRITNDVNQLQTAVAMLIRLVIRAPFICIGAIIMSMILDFRLALVLLAATPVLALILYVVITKASPLYRLYQKKLDKIALVLSENLTGVRVIRAFAKRGAERVKFNAASDDLTQTAIRVGRISALLSPATLLVVNGAIIAILWIGGIHIQYGSLTQGEIIAFINYITQILLALIVVTNLIILFTKAATSAARIQEVLDTEASISDTANPVSLDQERTSKTGSVPAISFDHVSFGYNKTGQLALSDVVVDIYPGKTVGIIGGTGSGKSTFVNLIPRFYDAVEGCVQVDGIDVRHYKLEQLRQKIGIVPQKALLFTGTIADNIRWGHEHATDEEVARAAAIAQADEFISNLPKKFDAPITRGGLNLSGGQKQRLTIARAIVGNPEILILDDSSSALDFATDAALRKSLRENSTRMTVLLVSQRVSSVQHADKIIVFDEGRIVGIGTHDQLMSNSEVYQEINRSQLSTQEVDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF58</accession>
    <name>E3EF58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplC1</name>
        <name evidence="7" type="ORF">PPSC2_03065</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369217.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15880"/>
    <dbReference type="EnsemblBacteria" id="ADO54578">
        <property type="protein sequence ID" value="ADO54578"/>
        <property type="gene ID" value="PPSC2_03065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.586"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="FWNTVLI"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="94"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="157"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="198"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="278"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="90"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="34625" checksum="AD6F12FA4EBFA272" modified="2011-01-11" version="1">MEAVKSTTPVSGLNNKLKSKSPQDRILEVVVYVFMIVVTVLTIYPFLNVLAISFNDSVDTIRGGITIWPRQFTLKNYDLIFTYEGLITGFKISFLRTVIGTVAGLVSGSMLAYTLARSDFQARRFISIFLAVTMYVSGGLIPGFILMKELHLIDTFAVYILPGLVSAFNVFIIRSFIDGLPYALQESAKLDGANDFTIYWRVILPLCKPALATVALFLAVGQWNSWFDTYLFNGSNESLTTLQYELMKILQSTTTSATNSQDAANMAERMAQVSPESVKMAITIIVTVPILIVYPFLQKYFVKGMTLGAVKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFF2</accession>
    <name>E3EFF2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybbJ</name>
        <name evidence="2" type="ORF">PPSC2_05505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55115.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1134"/>
    <dbReference type="EnsemblBacteria" id="ADO55115">
        <property type="protein sequence ID" value="ADO55115"/>
        <property type="gene ID" value="PPSC2_05505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1119"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111226_2_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55115.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="17990" checksum="06709C59B1189C77" modified="2015-05-27" version="2">MMNNVELVPYHCEHDAILHTFYLPEVQKQFTGMPAEMLALAKEDPHRHPVVITATGRPVGFFILYDGDELADYTNTSEALLLRAFSIHYADQGQGFAKQGLLLLPQFISRHFPHIREIVLGVNARNQAAQNLYLKCGFINEGNTKMGQHGLQHIFKMSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFI8</accession>
    <name>E3EFI8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Aminotransferase</fullName>
            <ecNumber evidence="2">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">alaT1</name>
        <name evidence="4" type="ORF">PPSC2_07190</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370106.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20170"/>
    <dbReference type="EnsemblBacteria" id="ADO55479">
        <property type="protein sequence ID" value="ADO55479"/>
        <property type="gene ID" value="PPSC2_07190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1485"/>
    <dbReference type="eggNOG" id="COG0436">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_4_3_9"/>
    <dbReference type="OMA" id="IHMEVGQ"/>
    <dbReference type="OrthoDB" id="554560at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="3">
        <location>
            <begin position="43"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="403" mass="44271" checksum="2FFA993B7C839DE4" modified="2011-01-11" version="1">MNLKTEAFTDSNKAMSSYLSPLVREIPSSGIRKFFDLVGGNKDIITLGVGEPDFTTPWHMREACVYSLERGFTSYTSNAGTAELREAISEYLNEQFDVRYDPKNEIIVTVGGSEAIDLALRALIVPGDEILVPEPCYISYSPITSIGGGIPVGIETFAKDEFKLTAEALEAKITPKSKVLILCYPSNPTGATMTYEDWLPIAEIVEKHDLIVISDEIYAELNYGDKHVSFASVPGMMDRTILVSGFSKAFAMTGWRIGYTCGHPDLIAAMLKIHQYTVMCAPSMGQVAALEGLRNGMGEKDRMVEAYNQRRRLMVEGFRDIGLECHEPRGAFYVFPSIQSTGLSSDEFAQRLLAEAKVAAVPGNVFGLGGEGYLRCSYATSVTQLTEALDRIGHFVEKVKKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN3</accession>
    <name>E3EFN3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase M4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pepSY</name>
        <name evidence="3" type="ORF">PPSC2_07400</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370151.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20380"/>
    <dbReference type="EnsemblBacteria" id="ADO55524">
        <property type="protein sequence ID" value="ADO55524"/>
        <property type="gene ID" value="PPSC2_07400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1530"/>
    <dbReference type="eggNOG" id="COG3212">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108880_0_0_9"/>
    <dbReference type="OMA" id="DIPYHIT"/>
    <dbReference type="OrthoDB" id="1255870at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025711">
        <property type="entry name" value="PepSY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03413">
        <property type="entry name" value="PepSY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PepSY" evidence="2">
        <location>
            <begin position="128"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="21969" checksum="D2A75EA07BA53377" modified="2011-01-11" version="1">MKTIYAWMIGGTVAAVLITICLLQWPWARSLAASPLEEKAVVQSVLHQYPGEVLESQRLDNFYVIKLERAKGKYEIKVNAYDGVIQSIKRTQMYTDAKQEPQDHTPGSSEPSDQSNPVHKTDPVSLVITENEAAKLAAKAVNGTSDDIELHRNDKGLYYLVEVEVQDGREAVVQINAVSGSIDSITWEKEKQDHDES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFS7</accession>
    <name>E3EFS7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55799.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1827"/>
    <dbReference type="EnsemblBacteria" id="ADO55799">
        <property type="protein sequence ID" value="ADO55799"/>
        <property type="gene ID" value="PPSC2_08620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1815"/>
    <dbReference type="eggNOG" id="COG5362">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2035710_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55799.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="14494" checksum="E860B5200595B835" modified="2015-05-27" version="2">MVRVVTKYNNLQDKDRINTALSFFIAHEKETLEGMKILWSEYFGYYYLICKKQAMGEKSFYKELQNDSRSTDDYIFQNLMYWNRLSEFEDMEMAMYIDPAIKAGKKNDYSDISIIGQQRKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGA6</accession>
    <name>E3EGA6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Transcription termination factor Rho</fullName>
            <ecNumber evidence="8">3.6.4.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">ATP-dependent helicase Rho</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">rho</name>
        <name evidence="12" type="ORF">PPSC2_00705</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homohexamer. The homohexamer assembles into an open ring structure.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the Rho family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368779.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13695"/>
    <dbReference type="EnsemblBacteria" id="ADO54134">
        <property type="protein sequence ID" value="ADO54134"/>
        <property type="gene ID" value="PPSC2_00705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.142"/>
    <dbReference type="eggNOG" id="COG1158">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016377_4_3_9"/>
    <dbReference type="OMA" id="TRLCRAH"/>
    <dbReference type="OrthoDB" id="1619125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008186">
        <property type="term" value="F:ATP-dependent activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04459">
        <property type="entry name" value="Rho_CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01128">
        <property type="entry name" value="rho_factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01884">
        <property type="entry name" value="Rho"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041703">
        <property type="entry name" value="Rho_factor_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011112">
        <property type="entry name" value="Rho_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036269">
        <property type="entry name" value="Rho_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011113">
        <property type="entry name" value="Rho_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004665">
        <property type="entry name" value="Term_rho"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46425">
        <property type="entry name" value="PTHR46425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07498">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07497">
        <property type="entry name" value="Rho_RNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00959">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68912">
        <property type="entry name" value="SSF68912"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00767">
        <property type="entry name" value="rho"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51856">
        <property type="entry name" value="RHO_RNA_BD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 8" id="KW-0347">Helicase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="7 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="6 8" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1 8" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="Rho RNA-BD" evidence="11">
        <location>
            <begin position="50"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="414"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="166"/>
            <end position="171"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="178"/>
            <end position="183"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="445" mass="49767" checksum="1040D6991F10A93B" modified="2011-01-11" version="1">MDLQISDLEEMKLTDLYKLAKQYQIPYYGTLKKKELIFAILRAQAEKSGLMFMQGVLEILPEGYGFLRPINYLPSTEDIYISASQIRKFDLRTGDLVSGKCRTPKENERYFGLLQVNAVNGRSPEQAAERLHFPALTPLYPQTKLVLETSPNHLSTRIMDVLAPVGLGQRGLIVAPPKAGKTLLLKEIANSISTNNPEIELFVLLIDERPEEVTDMQRSVKGEVVASTFDELPENHIKVAELVLERALRLVEHKKDVVILLDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNVEEGGSLTILATALIDTGSRMDDIIYEEFKGTGNMELHLDRKLAERRIFPAIDIRRSGTRREEVLLKKEELDTIWAIRKNMTESHDFVEGFLKKLRNSKTNAEFLASFDLTAPSSSGSQGSSGGQQRRTTRSTTASVPATTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGD6</accession>
    <name>E3EGD6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nucleotide-binding protein PPSC2_00905</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvcJ</name>
        <name evidence="2" type="ORF">PPSC2_00905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Displays ATPase and GTPase activities.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RapZ-like family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368808.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13895"/>
    <dbReference type="EnsemblBacteria" id="ADO54164">
        <property type="protein sequence ID" value="ADO54164"/>
        <property type="gene ID" value="PPSC2_00905"/>
    </dbReference>
    <dbReference type="GeneID" id="66574783"/>
    <dbReference type="KEGG" id="ppm:PPSC2_00905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.169"/>
    <dbReference type="eggNOG" id="COG1660">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059558_0_0_9"/>
    <dbReference type="OMA" id="TVMSFGF"/>
    <dbReference type="OrthoDB" id="1603998at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00636">
        <property type="entry name" value="RapZ_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005337">
        <property type="entry name" value="RapZ-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30448">
        <property type="entry name" value="PTHR30448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03668">
        <property type="entry name" value="ATP_bind_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005052">
        <property type="entry name" value="P-loopkin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="19"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="70"/>
            <end position="73"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="299" mass="33537" checksum="1FD11D7C0A3EAFAF" modified="2011-01-11" version="1">MTDNLKNAAPWATLIIITGMSGAGKTIAVQSLEDLGFFCVDNLPPVLIPKFAELIEQSNGKIGKVALVIDLRGREFFTALSESLNYIKDHFTIHCEILFLNANDGVLVQRYKESRRRHPLAPDGMPLDGIRLERKMLEELKSSATQVIDTSTMKPATLKARIISRFSHLESSMLSVNITSFGFKYGIPIDADLVFDVRFLPNPHYVDQLRPHTGQDSDVYDYVMKWPETQAFLTKLLDMLHFLIPQYRKEGKSQVIIGIGCTGGKHRSVAISEYLGKMLGASETESVSVSHRDADRDRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGF2</accession>
    <name>E3EGF2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribonuclease R</fullName>
            <shortName evidence="6">RNase R</shortName>
            <ecNumber evidence="6">3.1.13.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rnr</name>
        <name evidence="9" type="synonym">vacB</name>
        <name evidence="9" type="ORF">PPSC2_00980</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates.</text>
            <dbReference type="EC" id="3.1.13.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the RNR ribonuclease family. RNase R subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.13.1" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368824.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13970"/>
    <dbReference type="EnsemblBacteria" id="ADO54180">
        <property type="protein sequence ID" value="ADO54180"/>
        <property type="gene ID" value="PPSC2_00980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.184"/>
    <dbReference type="eggNOG" id="COG0557">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002333_4_1_9"/>
    <dbReference type="OMA" id="DWYEYRS"/>
    <dbReference type="OrthoDB" id="1602988at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008859">
        <property type="term" value="F:exoribonuclease II activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01895">
        <property type="entry name" value="RNase_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040476">
        <property type="entry name" value="CSD2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013223">
        <property type="entry name" value="RNase_B_OB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001900">
        <property type="entry name" value="RNase_II/R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022966">
        <property type="entry name" value="RNase_II/R_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004476">
        <property type="entry name" value="RNase_II/RNase_R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011805">
        <property type="entry name" value="RNase_R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17876">
        <property type="entry name" value="CSD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08206">
        <property type="entry name" value="OB_RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00773">
        <property type="entry name" value="RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00955">
        <property type="entry name" value="RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00358">
        <property type="entry name" value="3_prime_RNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02063">
        <property type="entry name" value="RNase_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01175">
        <property type="entry name" value="RIBONUCLEASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="S1 motif" evidence="8">
        <location>
            <begin position="629"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="715"/>
            <end position="869"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="732"/>
            <end position="765"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="869" mass="97455" checksum="B10E86F010391997" modified="2011-01-11" version="1">MITEQQLLDFMRETAYKPMTYQELEQHFDIKDAEEFREFLKLLNALEEDGKILLTRTNRYGVPERMDLQRGRLQAHAKGFAFLIPEDREHPDVYIHANDLKSAMNGDTVLVRVTSKGPAGGRLEGEVVRIVKRAVLQVVGVFQSHEAYGFVLPDDKRINRDIFIPKDSFNGAVNGQKVVVRIVSYPEGRAAAEGEVLEVLGHKDDPGVDILSVIRKHQLPEAFPDEVMAEADQAPDAITEEEIIRQGRRDLRDRIIVTIDGEDAKDLDDAVNVERLPNGNYRLGVHIADVGYYVRENSKLDLEAYNRGCSVYLVDRVIPMLPHRLSNGICSLNPQVDRLTLSCEMEFNEHMKVVKHDIFTSVIKTKERMTYTNVRKILEEEDAELMERYKDLVDVFRTMKDLALKLRANRMRRGAVDFDFDEAKVIVDDEGKAVDIVKRDRTIAEQIIEEFMLAANETVAEHFHWLKVPFLYRIHEDPDPEKLQNFMAFAANFGHQIKGRGNSIHPRALQTLLEDIQGTKEQTVLSTMMLRSMKQAKYDAESTGHFGLAAEYYSHFTSPIRRYPDLVIHRVIREVLENGGALTDERQEYLTARMPDIAQQSSERERVAVDAERDTEQMKKAEYMLDKVGEEFEGIISSVTSFGMFIELDNTVEGLTRLSALTDDYYHFDEQHMALIGERTSKVFRIGDEVKVRVARVNMEDYTIDFELVDMKQRQRRERTGGSGQGGDFARGEGRAKGRGREGRDRKGGKDKAGRERKGGREAAGKPKEGGNGGISTTGRAGRGGGNGVGTGSPGSFGFGSGKGGYNSPATGASKRRKKTSASGIFIGDAATPGSDARPGGEGAARRKRKKKGANGGNSTAGFVRKKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGH3</accession>
    <name>E3EGH3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fumarylacetoacetate hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mhpD</name>
        <name evidence="2" type="ORF">PPSC2_03225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369249.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16035"/>
    <dbReference type="EnsemblBacteria" id="ADO54612">
        <property type="protein sequence ID" value="ADO54612"/>
        <property type="gene ID" value="PPSC2_03225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.618"/>
    <dbReference type="eggNOG" id="COG0179">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028458_3_3_9"/>
    <dbReference type="OrthoDB" id="775108at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAA_hydrolase" evidence="1">
        <location>
            <begin position="135"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="336" mass="37853" checksum="174D6E466F7D6879" modified="2011-01-11" version="1">MKLVTFQTKTSQEPLFGFVINDKFVLSFAAIMKKQGTFVDSLESMDSYLHYLPASYDAAKELMQYAVELSHQFNENEVCPIGAVKLLPPVPHPAALIDFGLTPRHLRNAGVNLLQREYTGPEREELKRKIAEKFQKDPNKVIFSYYKCNHNALIGDGDTIHWPSYSSYLDIEPELAFVTGKGNCIAGYVIFNDSTVRDVQWPDFLALTGPTRCKDFDRSKGIGPFLATPDEIGNPLALDVDVRIGERLHWKGSTSEYSVHPAKVMEEILKVFTPLPGTIIGMGTIPDCCAIETEQWLLPSDRIQITFDKLGSLTQFVPDHVKITEPSRWEKRSDLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGP5</accession>
    <name>E3EGP5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flavoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-836</name>
        <name evidence="2" type="ORF">PPSC2_03545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369320.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16350"/>
    <dbReference type="EnsemblBacteria" id="ADO54684">
        <property type="protein sequence ID" value="ADO54684"/>
        <property type="gene ID" value="PPSC2_03545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.694"/>
    <dbReference type="eggNOG" id="COG0431">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055322_4_3_9"/>
    <dbReference type="OMA" id="TPEYNNG"/>
    <dbReference type="OrthoDB" id="1818437at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN_red" evidence="1">
        <location>
            <begin position="8"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="19894" checksum="59300D1C56394248" modified="2011-01-11" version="1">MIWVEQKIKVLAISGSLRQKSSNTALMKATIGLASENISFIVYDGLGDLPHFNPDLDVEEGPASVRELREQLKQADGVLICTPEYGNGVPGALKNALDWLVSSGEFVNKPTAVISASPSPMGGNLAHASLLLTLQMINAEIVENGKVIIPHITLKLNQEGIITNAETRQELEALLQGLGQACRGKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGS0</accession>
    <name>E3EGS0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369786.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1174"/>
    <dbReference type="EnsemblBacteria" id="ADO55154">
        <property type="protein sequence ID" value="ADO55154"/>
        <property type="gene ID" value="PPSC2_05695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1160"/>
    <dbReference type="eggNOG" id="ENOG50305W4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1561405_0_0_9"/>
    <dbReference type="OMA" id="TFWSEGL"/>
    <dbReference type="OrthoDB" id="1758517at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="93"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="22773" checksum="33F0F7EC66606E8E" modified="2011-01-11" version="1">MRAVPKVNANGLYLEDELVDDTFSGIVPFYSLSSPTLSDTNQQLDTHRLADSSTSTIDATNSESIPAGYTVGIPVPPGLYHPRFDIQGWLTHEAEYNQKLIEAQKAFEQLNNESQALFQKLHDEWRNKPENERGDEPVYFAQTFTAPERKDPATFWSEGLSDEAIKELTQKAGQQPSETDQLKQRIADLEVTLTQLMLGNTGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGV5</accession>
    <name>E3EGV5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">waaE</name>
        <name evidence="3" type="ORF">PPSC2_05840</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369821.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18805"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55189">
        <property type="protein sequence ID" value="ADO55189"/>
        <property type="gene ID" value="PPSC2_05840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1196"/>
    <dbReference type="eggNOG" id="COG0463">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065962_1_0_9"/>
    <dbReference type="OMA" id="YTELWAL"/>
    <dbReference type="OrthoDB" id="1379602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="28"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="32018" checksum="061B0B757C3DEEC4" modified="2011-01-11" version="1">MNHMSSVPADNRISVVIIAQDDGIRITAAIKSCQPFADDIVVIDGGSKDNTIQVAESLGCRVFSNPWPGYAKQRMFGVDKAEFDWIFLIDTDEVVDAELLGDLLKVKETLHDPAKAYSVFRIGDFLGKWMNKGEYLVRLYNRRIYGITNSLVHEMPDVASSQIINLEGVLWHYGFRSISDHMTRFNKYTDLEAETAFNKGRSFRITRLLWRPPARFVQKYFVQGLYRKGLAGFAVAVFWVMYEFLVCFKHYELTKRRKKIEVVDGGQTEQKGETSYVVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH15</accession>
    <name>E3EH15_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370202.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1598"/>
    <dbReference type="EnsemblBacteria" id="ADO55575">
        <property type="protein sequence ID" value="ADO55575"/>
        <property type="gene ID" value="PPSC2_07630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1579"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046846_1_0_9"/>
    <dbReference type="OMA" id="NWRRISP"/>
    <dbReference type="OrthoDB" id="495395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="457" mass="53747" checksum="B07635ACCAA74FE2" modified="2011-01-11" version="1">MEITPTIRAEVQTYLIRKSLTMTEFGHMIDLNVGTVSGIVTGNRSISVHQLDRITMGMNLPPDYFYERYIDECIEEEPLNWRRISPFLYRCVELGRLDCLRRVVGMLLDNPVYLPSLFEVAEDSYKKGYTEAAAFLYENVAEGEKYQYSERLAVCQYRLFTIRIGDDQEKNYDAAIQFEPYVERLDEIDQLEALKDLANTYRSLRKWDKLELFAKALGDKAKIQYNLEQKRHHMNKDNSKKPKFPLFAYWAFSHLLRAEACEGRKDYEQALQHTYAYADLSWVNATDETALKWKRQYEDWAVVNTYANKLLSGDKGVLLNYVNYISSRKEEVLPALDNMLEAANRYHFDVDDILIQFEGEIISFLEREKVEGLYTQRFITERYTDFSRELAIYLLRKGKFSDGFTFLLSCLERSAEVNNKIQAIRCMRLFTHFKEHASFHTRTVYGNLIKVVNEDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH58</accession>
    <name>E3EH58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mdmC3</name>
        <name evidence="4" type="ORF">PPSC2_08855</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55849.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21320"/>
    <dbReference type="EnsemblBacteria" id="ADO55849">
        <property type="protein sequence ID" value="ADO55849"/>
        <property type="gene ID" value="PPSC2_08855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1867"/>
    <dbReference type="eggNOG" id="COG4122">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067676_8_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008171">
        <property type="term" value="F:O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002935">
        <property type="entry name" value="SAM_O-MeTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01596">
        <property type="entry name" value="Methyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51682">
        <property type="entry name" value="SAM_OMT_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55849.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="22791" checksum="36E2135BA3605913" modified="2015-05-27" version="2">MTPEQYVDQLVQEDEALRSIREAIVKEGMPEVSVAHPYGKLLTFLVEVSGAQQVLEIGALGGYSGLCLARGLGEKGRIVSLELKEAYAALAHQHMKNNGYGDRVEYRIGPAADSLKKLQEEGKTFDFFFIDADKENYPVYLEYAIALANPGAIIAGDNCFLRGRTLNTDKNGPAVQAVRRFNETIATDPRLVSTLLPAYDGLALARVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHA4</accession>
    <name>E3EHA4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thioredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">trxA1</name>
        <name evidence="3" type="ORF">PPSC2_09075</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370512.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21545"/>
    <dbReference type="EnsemblBacteria" id="ADO55895">
        <property type="protein sequence ID" value="ADO55895"/>
        <property type="gene ID" value="PPSC2_09075"/>
    </dbReference>
    <dbReference type="GeneID" id="66578123"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1912"/>
    <dbReference type="eggNOG" id="COG0526">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_121850_1_0_9"/>
    <dbReference type="OMA" id="HYENGKE"/>
    <dbReference type="OrthoDB" id="1630944at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="64"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="20063" checksum="F21E9B80ABA6100E" modified="2011-01-11" version="1">MNAQKSNKKKLIPVIGFFVVLIILLGVLLALNSGTKNKLYGVSTASLSPTTQELLNDPNYQQIIKPEDLQSKIDKKESFFVYHFASDCVHCRATTPKLMPLSKQENITMHEFNLREYEAGWDKYKIEYTPTLVYYEKGVEKERMVGGLKESPSDNGYTLDDFKAFFEKYKKNVTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHG2</accession>
    <name>E3EHG2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Exopolyphosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mipP</name>
        <name evidence="3" type="ORF">PPSC2_10110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370724.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22580"/>
    <dbReference type="EnsemblBacteria" id="ADO56115">
        <property type="protein sequence ID" value="ADO56115"/>
        <property type="gene ID" value="PPSC2_10110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2131"/>
    <dbReference type="eggNOG" id="COG0618">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039720_0_0_9"/>
    <dbReference type="OMA" id="YTGIMTD"/>
    <dbReference type="OrthoDB" id="1040743at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001667">
        <property type="entry name" value="DDH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038763">
        <property type="entry name" value="DHH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003156">
        <property type="entry name" value="DHHA1_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01368">
        <property type="entry name" value="DHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02272">
        <property type="entry name" value="DHHA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64182">
        <property type="entry name" value="SSF64182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHH" evidence="1">
        <location>
            <begin position="22"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="DHHA1" evidence="2">
        <location>
            <begin position="243"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="325" mass="35863" checksum="3EA0E0F12241309E" modified="2011-01-11" version="1">MHTYEQALQQAKEFILEHDDYLIVSHVQPDGDAVSSTVTVGWLLSCLGKKFTMLNEGPIPKRMDFLWHADEIMDMSQQPPERKYNRIICVDCADYRRVGLTEQFFTEDAIILNIDHHPTNDAFGTVNVIKSDAAATAEILFDLLEKFAVTWDVEVATAVYTGLLTDTGGFRYSNTSPKVMSTVSQLLAYGVDGPFLSEKLLEEMTFPQMKVLTKALQTLTMSEDGKVAWVVVTPDDMTECGAVNEDLEGIVNYPRNIRGVEVGIFFKVINDQATKASLRSAGNVDVAALAQSFGGGGHVRAAGCRLEGKLEDIIETIVGRVKSEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH7</accession>
    <name>E3EHH7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370739.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22655"/>
    <dbReference type="EnsemblBacteria" id="ADO56130">
        <property type="protein sequence ID" value="ADO56130"/>
        <property type="gene ID" value="PPSC2_10185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2146"/>
    <dbReference type="eggNOG" id="ENOG5033ACS">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_189760_0_0_9"/>
    <dbReference type="OMA" id="PGQVIEW"/>
    <dbReference type="OrthoDB" id="2084435at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025619">
        <property type="entry name" value="YlzJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14035">
        <property type="entry name" value="YlzJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="70" mass="8165" checksum="40AF2F8678A07BDA" modified="2011-01-11" version="1">MTLYTVMPMELVWEGMWKEGEELVEVRVDGLLMQVQPLESRRGIIVRLLDCPLEAYLNPRYGPGQVIEWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHV4</accession>
    <name>E3EHV4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fe3+-hydroxamate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fhuD3</name>
        <name evidence="4" type="ORF">PPSC2_11630</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371051.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24005"/>
    <dbReference type="EnsemblBacteria" id="ADO56446">
        <property type="protein sequence ID" value="ADO56446"/>
        <property type="gene ID" value="PPSC2_11630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2459"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_0_1_9"/>
    <dbReference type="OMA" id="NWARGTE"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168932" evidence="2">
        <location>
            <begin position="32"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="3">
        <location>
            <begin position="69"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="36533" checksum="A6FD6C585687221A" modified="2011-01-11" version="1">MHHMMSKKSYMILCALFVMIFVISGCGNAGSSSDSSAQPASSTKEEAGGESATRTVSTIKGDVKVPANPQRVVVNWYIGDVFTLGIKPAAVFGWKQETMPFYDKFNGIPVIEKWETEEIMKYDPDLIITYDTKDYDKLSKIAPVLVIPEGKMTSVERLKFLGQATGHEAEADKVISQFESKLSEAKEKLNSDIFKDKTFSIFEDWGSGSYGIYYETGSRGGTLLYDFLGLHKPEKLNTLIKNSGERRGSLSYEVAAEYFGDYVLWFKQEGKESEYAKTKIWSSIPAVKNGHIIEIPAKYAGLFYYSDVASMTGQLDYIIGKLLEQTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIC3</accession>
    <name>E3EIC3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Acetyl-CoA acetyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">atoB</name>
        <name evidence="7" type="ORF">PPSC2_06060</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369868.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19025"/>
    <dbReference type="EnsemblBacteria" id="ADO55236">
        <property type="protein sequence ID" value="ADO55236"/>
        <property type="gene ID" value="PPSC2_06060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1242"/>
    <dbReference type="eggNOG" id="COG0183">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031026_0_0_9"/>
    <dbReference type="OMA" id="ICPSIAI"/>
    <dbReference type="OrthoDB" id="1058688at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003985">
        <property type="term" value="F:acetyl-CoA C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168942" evidence="4">
        <location>
            <begin position="16"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_N" evidence="5">
        <location>
            <begin position="4"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="6">
        <location>
            <begin position="269"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="2">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="348"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000429-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="41756" checksum="3F183BBBA3217AF8" modified="2011-01-11" version="1">MKKVAIVSPLRTAVGSFNKTLAPLSAPELGATVMTACLQQSKLEPSLIDQIFMGNVLQAGNGQNPARQAALKAGIPIDVPESTINTVCGSGLHAVALAYDSILAEQGNIVLAGGMESMSNAPYLLKNARNGYKLGNGELVDSLVADGLTCPINHYHMGITAENVAEKYGISRLEQDSFAYESQIKAFEAKNNKFFEEQIVPVMIKNKKETTYFTEDEHIRGNTTKEKLSNLKPAFKEDGTVTAGNASGINDGAAAMLVVSEDKCKEHALKPLAYIKGYSLVGVDPAYMGMGPVKAISSLLKKQGMSIDDIDLFEINEAFAAQALAVQKELGVSPEKVNVNGGAIAIGHPVGASGARVLVTLVHEMVRRSSRYGVVSLCIGTGMGIAMLVENALI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIC7</accession>
    <name>E3EIC7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rimI</name>
        <name evidence="2" type="ORF">PPSC2_06080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369872.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19045"/>
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        <property type="protein sequence ID" value="ADO55240"/>
        <property type="gene ID" value="PPSC2_06080"/>
    </dbReference>
    <dbReference type="GeneID" id="66573724"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1246"/>
    <dbReference type="eggNOG" id="COG0456">
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="P:N-terminal protein amino acid acetylation"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006464">
        <property type="entry name" value="AcTrfase_RimI/Ard1"/>
    </dbReference>
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        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01575">
        <property type="entry name" value="rimI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="11"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="19693" checksum="D18147BE90F17D51" modified="2011-01-11" version="1">MAKNIQREEKLEFRLMQLDDIPDVLEIEHEAFTLPWTEEAFRNELTMNHFAKYMIMELNGRAIGYAGMWTIMDEAHITNIAVREAYRGRKLGDKLLDELMQTASYLGMERMTLEVRVTNRIAQGLYEKKGFKPAGVRKGYYSDNNEDAVIMWADLPAHGASGEQEGSVQEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG6</accession>
    <name>E3EIG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YcbO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ycbO</name>
        <name evidence="2" type="ORF">PPSC2_06245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55279.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19200"/>
    <dbReference type="EnsemblBacteria" id="ADO55279">
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        <property type="gene ID" value="PPSC2_06245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1287"/>
    <dbReference type="eggNOG" id="ENOG502Z9TS">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_102870_2_0_9"/>
    <dbReference type="OMA" id="LVMFTYP"/>
    <dbReference type="OrthoDB" id="1193140at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="203"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="25451" checksum="2ED5B653E4099EE1" modified="2011-01-11" version="1">MLKLIQLEMKKLHLVGYIRSALIANACILGLLSTIALDSQNEGVPEFTQYAQLLDLMDNMVRATFIVFASVLLCRFIVGEFKSKSITILFMYPIHRQKLMIAKLLIVLLFTFLSIVISEIIITAAIHLLNQFVIIVPDKLTLSILAEQSARTLINAVAASFMGLVPLYMGMRRYSVPTTIVTSILIVALLFSNNNGATLSSIAPVQISFSVLGILVAYAAIRRIEYKDIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIR7</accession>
    <name>E3EIR7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YqkA1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yqkA1</name>
        <name evidence="1" type="ORF">PPSC2_09275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370553.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21745"/>
    <dbReference type="EnsemblBacteria" id="ADO55936">
        <property type="protein sequence ID" value="ADO55936"/>
        <property type="gene ID" value="PPSC2_09275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1954"/>
    <dbReference type="eggNOG" id="COG2320">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086407_4_1_9"/>
    <dbReference type="OMA" id="WQLFPIF"/>
    <dbReference type="OrthoDB" id="1515383at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007344">
        <property type="entry name" value="GrpB/CoaE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34822">
        <property type="entry name" value="PTHR34822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04229">
        <property type="entry name" value="GrpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="20936" checksum="CA4D6CB0E101D583" modified="2011-01-11" version="1">MSKQVVISEYNPQWVAEYTRERAKMIEALGDVCVGVEHIGSTSVPGLGAKAIIDIMVGVEDLAIIQSEQRERLLGIEYEYVHKPDFPERAFFRRGEWGAGTHHLHIYKYKGEHWENHLLFRDYLKAHPESLRGYETLKKDLAHQFKHDRAAYTEAKGPFIRQIVEQAKLERQKQRQMEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIW2</accession>
    <name>E3EIW2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ysnE</name>
        <name evidence="2" type="ORF">PPSC2_09480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370598.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55981">
        <property type="protein sequence ID" value="ADO55981"/>
        <property type="gene ID" value="PPSC2_09480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1999"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_11_8_9"/>
    <dbReference type="OMA" id="GCCALVE"/>
    <dbReference type="OrthoDB" id="1983082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
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        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="156" mass="18017" checksum="12AC74B2AF2E201D" modified="2011-01-11" version="1">MSKLTILKVESNHSDLHHLIHRLDEDLLERYPADQIYLVDFSNPKVKSMFFAVVYVDEKPVACGGLRPIDAEEMELKRFYVDSSYRRQGIAVSLLSFLEEEARKRGVVRIKLETGAAQPEAIAFYTKQGYEPIERFGEYEYDENSLCYGKKLSLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ05</accession>
    <name>E3EJ05_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ispC</name>
        <name evidence="3" type="ORF">PPSC2_10440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370792.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2214"/>
    <dbReference type="EnsemblBacteria" id="ADO56186">
        <property type="protein sequence ID" value="ADO56186"/>
        <property type="gene ID" value="PPSC2_10440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2200"/>
    <dbReference type="eggNOG" id="COG0860">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079050_0_0_9"/>
    <dbReference type="OrthoDB" id="1206229at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168996" evidence="1">
        <location>
            <begin position="24"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="45"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33352" checksum="A717FDC7877827C0" modified="2011-01-11" version="1">MKKTFLSIVVLLILSGNMANAKAKPIQLNANGNLLTDMKSPIVLNNTSFVPIRVVESLGDYKVGWNSKSKTITVICDGDSLQLTVGNNVALKNHKKISLSTLPVMKDGMAYVPLRFISENFNAIVDWDSKNNGIAIINPDQNEQMLIQSGDLAKARLGVIGLQRVQFYVSKDRPEGESFSFIFPENDFSKMYFIWSDSIYYYELKNGYMSLAWEGKKTFSKLDGTHSSLSKYLGGDIESIWGEQPAVTKRLVFFNDNTGSVGMVGEYGIIDTKGNVVVSHKVQDAKQLADLIVNVQEEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ25</accession>
    <name>E3EJ25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370812.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56206">
        <property type="protein sequence ID" value="ADO56206"/>
        <property type="gene ID" value="PPSC2_10525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2223"/>
    <dbReference type="HOGENOM" id="CLU_1650468_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168959" evidence="1">
        <location>
            <begin position="29"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="18366" checksum="CCFAF739B285E96C" modified="2011-01-11" version="1">MKKSIYLLTSTILLTTAISCSNQEPAISTKNSQQKTYNPITQENKNDTEILNVTQIATEFKQTEFEVSDYNKSITPNWIKQRKSKLEPLMTTNFLKKQVDNRKIALPLEIASLEKTTLSIEDLQFQEKSVTKKNIDLTNSATLMLKDKIKKSPWKANSFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ41</accession>
    <name>E3EJ41_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Replication termination protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">rtp</name>
        <name evidence="1" type="ORF">PPSC2_10585</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370828.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22980"/>
    <dbReference type="EnsemblBacteria" id="ADO56222">
        <property type="protein sequence ID" value="ADO56222"/>
        <property type="gene ID" value="PPSC2_10585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2237"/>
    <dbReference type="eggNOG" id="COG1695">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1999150_0_0_9"/>
    <dbReference type="OMA" id="YGYQMLE"/>
    <dbReference type="OrthoDB" id="1689114at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006274">
        <property type="term" value="P:DNA replication termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003432">
        <property type="entry name" value="RTP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02334">
        <property type="entry name" value="RTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021424">
        <property type="entry name" value="RTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="14272" checksum="E9885A0F64785179" modified="2011-01-11" version="1">MAFMISQRAFIKIYLITMVERHRGYGYQMLESMKDEFSSFGYVPPQSEVYRALHELVQEGVFYRTKRLKGTDPRVDFQEIVLYHFTDDGEEKARLYKKQVKADLDRCLGMLHKAEQDNYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ84</accession>
    <name>E3EJ84_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xylA1</name>
        <name evidence="2" type="ORF">PPSC2_11285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370976.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23640"/>
    <dbReference type="EnsemblBacteria" id="ADO56371">
        <property type="protein sequence ID" value="ADO56371"/>
        <property type="gene ID" value="PPSC2_11285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2388"/>
    <dbReference type="eggNOG" id="COG4952">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059875_0_0_9"/>
    <dbReference type="OMA" id="MIDQSHN"/>
    <dbReference type="OrthoDB" id="283831at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013457">
        <property type="entry name" value="Rhamnose_iso-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02635">
        <property type="entry name" value="RhaI_grampos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="91"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="406" mass="45571" checksum="2B5FED22878ECCC4" modified="2011-01-11" version="1">MSDKAYALFEEQQQQRGIDLEQVKTKLKALSIETPSWGYGDSGTRFKVFQKTGVPRDPFEKLEDAAQVHALTGLCPSVAIHIPWDKVDNYGKLRSHAESLGLQIGAVNPNLFQDEDYMLGSVTNVDPAIRRKAINHLLECVDIAKETGSNDFSLWFADGTNYPGQGDIRKRKNWMLEALSEMYKALTPDMRMLIEYKAFEPAFYHTDIADWGMAYHYATKLGPQAQVLVDTGHHLPGANVEHIVAFLMDEKRLGGFHFNSYKYADDDLIVGSANPYELFLIFYQILNAAQDVDADIRHTVDKIAYLIDQSHNIEPKIPAMIRSVLNVQTQYAKALLINHAEVEEASSRQDVLGAEDAVRQAFEFDVAPLLKAIREEQGLPADPMKAYLASEYGTQILQRGKGGASW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJE5</accession>
    <name>E3EJE5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase</fullName>
            <ecNumber evidence="3">4.2.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yjdI</name>
        <name evidence="5" type="ORF">PPSC2_11575</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371037.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23940"/>
    <dbReference type="EnsemblBacteria" id="ADO56432">
        <property type="protein sequence ID" value="ADO56432"/>
        <property type="gene ID" value="PPSC2_11575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2447"/>
    <dbReference type="eggNOG" id="COG2606">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094875_3_0_9"/>
    <dbReference type="OMA" id="PYDYVEH"/>
    <dbReference type="OrthoDB" id="1503081at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00002">
        <property type="entry name" value="YbaK_deacylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.960.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004369">
        <property type="entry name" value="Prolyl-tRNA_editing_YbaK/EbsC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036754">
        <property type="entry name" value="YbaK/aa-tRNA-synt-asso_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007214">
        <property type="entry name" value="YbaK/aa-tRNA-synth-assoc-dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04073">
        <property type="entry name" value="tRNA_edit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006181">
        <property type="entry name" value="EbsC_YbaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55826">
        <property type="entry name" value="SSF55826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00011">
        <property type="entry name" value="YbaK_EbsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA_edit" evidence="4">
        <location>
            <begin position="36"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR006181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="159" mass="17667" checksum="652BEA0A949913D6" modified="2011-01-11" version="1">MSVSKTNAMRILDGQHIHYNILSYDHQDGKIDGMNVAEKIQRAPESVFKTLVAHSKQSLFVFVIPVHKELDLKKAAKSAGEKKIEMLPVKDLQKHTGYIRGGCSPIGMKKIYPTYIDQPAFELETIVVSAGKIGTQVELSPHDLAQIIQAQFTDLTHTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJL0</accession>
    <name>E3EJL0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-mannonate oxidoreductase</fullName>
            <ecNumber evidence="2">1.1.1.131</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yjmF</name>
        <name evidence="2" type="ORF">PPSC2_12180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.131" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371164.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24535"/>
    <dbReference type="EnsemblBacteria" id="ADO56560">
        <property type="protein sequence ID" value="ADO56560"/>
        <property type="gene ID" value="PPSC2_12180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2575"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_1_9"/>
    <dbReference type="OMA" id="TPMTDRH"/>
    <dbReference type="OrthoDB" id="1294334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050090">
        <property type="term" value="F:mannuronate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="284" mass="30006" checksum="2D7B671EE7F3B30F" modified="2011-01-11" version="1">MTSLPLHPALSGKTVVVTGGSGVLCSSMAKELARQGAKVAILNRTADKGELIAKEICESGGESIAVACDVTDVESVKQAEERVRRLLGPCDILINGAGGNHPSANTSLETFHPEDLNQPGITTFFDLSVPGFRNVLDLNFIGTLIPTQIFSKSMIGRPGAVVLNISSMSAPSPMTKVPAYSAAKAAINNFTQWLAVHLAESGIRVNAIAPGFFLTEQNRQLLTNEDGSLTERSAKIIAHTPMRRFGEPEDLLGTLLWLVDETASGFVTGAVIPIDGGFMAYSGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJZ1</accession>
    <name>E3EJZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386424.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO60010">
        <property type="protein sequence ID" value="ADO60010"/>
        <property type="gene ID" value="PPSC2_28140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5965"/>
    <dbReference type="eggNOG" id="ENOG50303W4">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1371048_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="199" mass="23595" checksum="3EA0645CBA4D4DA7" modified="2011-01-11" version="1">MSQSHLLQLIYPEKKPQGLFESWKQLFMEKSPYMEVSLEVPKRELLRLQTFIDDINELDRDIQFTMEDLIAFLYGNLIQDARKGKLKNRPFADKLLSMYKELKEPKMRETWKLVSPNQMSRIHESIPRSHSFVYYPIQLQKKYVLRGEVLLMDLYDEEKEKIGIKVADLITLLLIEFSDEIRKGPTQKRIQTILKGLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKA1</accession>
    <name>E3EKA1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AAA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385842.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0034"/>
    <dbReference type="EnsemblBacteria" id="ADO59428">
        <property type="protein sequence ID" value="ADO59428"/>
        <property type="gene ID" value="PPSC2_27920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5916"/>
    <dbReference type="eggNOG" id="COG0714">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_499524_0_0_9"/>
    <dbReference type="OrthoDB" id="895310at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="307"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="545" mass="60714" checksum="11A02F0604326AFF" modified="2011-01-11" version="1">MKNTTMVTVVGLSSRDPGKHKVVVGDVLFFEKELDNKDPYAIKAFTDKERESVGYVANGRSTVMMNTESAEHVYDSFGKYVWGQVVEITESLFKNGHKSKAFIVCLDIDDFVEGDVSMEQHVMKFKLVGAKTQYPKKFDVIDDLKKGKVPFIKIFPQDDKLVAEYEGGLAGHIDTKKQEGYSVYEDIVAAIPKEQIAKITGFLTTNLIGEFVLNAGELQTVKTAQDFKTVCQKVVENGLATDEEIQKRVHYMEKCRVPEKAMIRVFGSYQQYREEVAALIPEMEAPKVLYQDGNQGIVLDCISYINGDRNLLFEGDRGVGKNVLIETLAWLYKRPLYEFAINSQHDNASLLGGKTIEADEDGQTKMGFDVEATIQAAIEGGVLNLDEINTGLAHALIIFNSLLDDRRRMYVPGYGNIQAHPNFVVIGSMNRDYQGTFDLNEATADRFVPIVFPKMLSLKEVLLAKVPDVGLSIINKCDQLYSGIKKIVEDGEVSDKALTIRGFVDACIGVEQGLTLQRALITNVAHRCSDTDDRNAILNVIRASI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKM1</accession>
    <name>E3EKM1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386267.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0464"/>
    <dbReference type="EnsemblBacteria" id="ADO59853">
        <property type="protein sequence ID" value="ADO59853"/>
        <property type="gene ID" value="PPSC2_25925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5448"/>
    <dbReference type="HOGENOM" id="CLU_1164473_0_0_9"/>
    <dbReference type="OrthoDB" id="2125515at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168985" evidence="1">
        <location>
            <begin position="32"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="240" mass="26555" checksum="64133932BADE0FC9" modified="2011-01-11" version="1">MCSKSKSLIICITLSLLIIALSGCTPEVVPVDVTVPVMKKLSGDKMTFTHELNGNTITTSYDLGGYKLENWRITDSKSINLSVGVKKKNADSEILVEHVHADVSIKSTDPQLNGLTQDTMDNSYHGTSQDGFFINEKYSYANIFAIEGFSKDIIDGWMFYQGEYGNGQMLTKRLTENTLLESGTYGSQITVVYNLLVKNPGDDKYHIESLEDRILIPTAAVIQASKEQEAAEHAKTKTQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKT8</accession>
    <name>E3EKT8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Secretion system protein E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27395</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385953.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0146"/>
    <dbReference type="EnsemblBacteria" id="ADO59539">
        <property type="protein sequence ID" value="ADO59539"/>
        <property type="gene ID" value="PPSC2_27395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5798"/>
    <dbReference type="eggNOG" id="COG4962">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_585067_0_0_9"/>
    <dbReference type="OMA" id="WRINAIH"/>
    <dbReference type="OrthoDB" id="473670at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="118"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="53493" checksum="97F24E8A3DB7DE03" modified="2011-01-11" version="1">MEQSFHSFRRDLAKFKNAKQEGSVLLTYEEALEEVRTKLGEKLENIFKSQGDITTKSDKPVEENVKDKEFLRKKISMYRDHIADIVHNNNIRVRQFEGTNEIERFIDEMAQEFAGYSILSKAFADPGITDIYVIRWNKIFVEKDGMNMKYPYTFRNPKHLKDTIERFLREAGKAINDGDQKIVDFELFGDRGCATSKKVSPKDYSMTIRKHNEDQITKEHIVKNGVLNEELADLLGLLITGESNLIYAGITGSGKTTTIRALLDHYVTKANKRMLVCEDTQELFPQNEHTLELVSVKSDDESLRVTLGQLIITALRLKPKYIIVGEVRGEEAQAAVEGMETGHSTIFTMHGGNPWNIINRLVTKYLMAMPSLGIDVVERIIGSSLDYIAIQDNIPGTGRKCTSLSEVTYNFETRRIELKPIYKYDFRTKEFKFENKISREKADMMMSRGVAWDQLEPWVEDERVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL50</accession>
    <name>E3EL50_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386026.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0219"/>
    <dbReference type="EnsemblBacteria" id="ADO59612">
        <property type="protein sequence ID" value="ADO59612"/>
        <property type="gene ID" value="PPSC2_27085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5727"/>
    <dbReference type="HOGENOM" id="CLU_2357110_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="11635" checksum="11A379953FFCE9FD" modified="2011-01-11" version="1">MEELETDYIRNNTSINDETADRLTKEFKTIWRNIEAATDIAGWKLAFSHDMSEKCFGWWDVIFTQGNWNEETFMSIWKLFSDFNKRLDEVFEQYNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL83</accession>
    <name>E3EL83_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59915.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886240.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0526"/>
    <dbReference type="EnsemblBacteria" id="ADO59915">
        <property type="protein sequence ID" value="ADO59915"/>
        <property type="gene ID" value="PPSC2_28590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6067"/>
    <dbReference type="HOGENOM" id="CLU_1523704_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59915.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="20347" checksum="B9864127D45443B0" modified="2015-05-27" version="2">MGRLCVGMFGMFGTCGTQLQSPWRAAFKKVYGERGVEFFDPQKEDWKPEDADLEAEHLAEDQIILFPITAATYGLGSLSEVGFSILQAIKLDDRRDFIVLIDKHLDDSLNDEQLVKESQRSRALVRKHLEKLRLDNIYVVETLDEMLEMSIELYELAERKSRFAKFNPHNLHVLRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELB1</accession>
    <name>E3ELB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386357.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0554"/>
    <dbReference type="EnsemblBacteria" id="ADO59943">
        <property type="protein sequence ID" value="ADO59943"/>
        <property type="gene ID" value="PPSC2_28465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6038"/>
    <dbReference type="HOGENOM" id="CLU_1407584_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="22194" checksum="ADBC681F7719DCC3" modified="2011-01-11" version="1">MYIVEVETNKGKIRGVALQDQDGSIAIITGVHIEVTKKWFKHNKKVCYEVIQLESSDYTSYTIISELGSYEKTCMYELLNDDMKHMFTSYYKNELLQTNLFWNKVKLLIIEQNLTLTELSVVHELFRDGFAKENIVGLEVSNDDRRVSFNLTEQEGVQHLMQLIQKAVMHGELVAKANNVKIIDGISSQLKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELC1</accession>
    <name>E3ELC1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386367.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0564"/>
    <dbReference type="EnsemblBacteria" id="ADO59953">
        <property type="protein sequence ID" value="ADO59953"/>
        <property type="gene ID" value="PPSC2_28420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6028"/>
    <dbReference type="HOGENOM" id="CLU_1466856_0_0_9"/>
    <dbReference type="OrthoDB" id="1079090at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="21131" checksum="43DBDDE04C962870" modified="2011-01-11" version="1">MSVNEKLQEFLKQGAIGAFSGGSKVLELIGEGKSHLIGSYLDQIRNCGDNENVRGNVDVVYELERTDLFAEQSWIYTETNAFLDIPLEFDEVSEVELFIQLSKGIYQIELKMKINDPKGDHYDADIYHNTGNILRYGYGYAYDDKMIFEVSDLEEGICRIDIYTKRDKGTIQEVKISPWKHRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBM2</accession>
    <name>A0A0D5ZBM2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yndE9</name>
        <name evidence="7" type="ORF">PPSC2_01500</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025674310.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14195"/>
    <dbReference type="EnsemblBacteria" id="AKA44180">
        <property type="protein sequence ID" value="AKA44180"/>
        <property type="gene ID" value="PPSC2_01500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.297"/>
    <dbReference type="HOGENOM" id="CLU_047547_0_2_9"/>
    <dbReference type="OrthoDB" id="823978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004761">
        <property type="entry name" value="Spore_GerAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34975">
        <property type="entry name" value="PTHR34975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03845">
        <property type="entry name" value="Spore_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00912">
        <property type="entry name" value="2A0309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="87"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="124"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="153"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="224"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="276"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="308"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="339"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="AKA44180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="372" mass="42394" checksum="F1869FDCDDC0D1C3" modified="2015-05-27" version="1">MSNIPSMKQEKISTLQALFTVTSTVYAVGIVSLPRTIAEKTQTPDVWQGLLLATLLGIGVIFIHVKLCHRFPGKTFYEFNPVIAGKFIGFLINIAFIVFCTMICSLVCRMMAEFLKGLALERTPISMILLPFLLLIGYLTWGGLHAMVRLIELFFPLTFIVFLLLIILNINHFNLDNLRPVFHKGWRPIFESLKVIPFSTMGFESILILTNVMTHPQKAWKAGWIGYSIAMGLYILMVTMVIGCMSVEEVSRLQWPVVSFAQQIEFPGAFLERFEILFIILWTIKIFMTASNYYFYIVTGISQLTQKWNKYICYLPLIILFCLSMYPQNFIEIGNFDKIIGYVGIVVCAAVPSVLLVISMVFHRTEKTDGKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBN8</accession>
    <name>A0A0D5ZBN8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44195">
        <property type="protein sequence ID" value="AKA44195"/>
        <property type="gene ID" value="PPSC2_05530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1124"/>
    <dbReference type="HOGENOM" id="CLU_1863214_0_0_9"/>
    <dbReference type="OrthoDB" id="1522176at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="15887" checksum="E7FCA3F721E1F6CC" modified="2015-05-27" version="1">MNEETIAFKCGACQQVPDKPLLENKDFEIVAIEDTMDWADFKHDTPDLNSEIWERALNPPAEGDLKKVQVYFPFHMSVGETFWTLFRPDLLIHILMVGKNNLMRSASLRLLNVDLKTSYPKMKKELGSMSEWSKSFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBY6</accession>
    <name>A0A0D5ZBY6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886018.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3745"/>
    <dbReference type="EnsemblBacteria" id="AKA44290">
        <property type="protein sequence ID" value="AKA44290"/>
        <property type="gene ID" value="PPSC2_17505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3740"/>
    <dbReference type="eggNOG" id="ENOG50306HX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2024440_0_0_9"/>
    <dbReference type="OrthoDB" id="2141245at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="122" mass="14086" checksum="10352DE566D987AE" modified="2015-05-27" version="1">MRMQDKPIVSVIGLGLFSLSLVVHICFKSIRTMDDVGMGILLSLVNAIFLVFPLLWGVLGAVEFSRIMSWSEKIKEREVNEEVDLDKYKKKIKIYLCINVVYLLLVICQLGYVIYRWDEVNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCD4</accession>
    <name>A0A0D5ZCD4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">mRNA interferase</fullName>
            <ecNumber evidence="3">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pemK</name>
        <name evidence="4" type="ORF">PPSC2_06315</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Toxic component of a type II toxin-antitoxin (TA) system.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the PemK/MazF family.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429335.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19260"/>
    <dbReference type="EnsemblBacteria" id="AKA44197">
        <property type="protein sequence ID" value="AKA44197"/>
        <property type="gene ID" value="PPSC2_06315"/>
    </dbReference>
    <dbReference type="GeneID" id="66573677"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1305"/>
    <dbReference type="eggNOG" id="COG2337">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_121823_1_0_9"/>
    <dbReference type="OrthoDB" id="1754531at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003477">
        <property type="entry name" value="PemK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011067">
        <property type="entry name" value="Plasmid_toxin/cell-grow_inhib"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33988">
        <property type="entry name" value="PTHR33988"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02452">
        <property type="entry name" value="PemK_toxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF033490">
        <property type="entry name" value="MazF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR033490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="AKA44197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="12823" checksum="B001D08F17E50061" modified="2015-05-27" version="1">MIVKRGDVFFADLSPVVGSEQGGVRPVLIIQNDIGNRFSPTVIVAAITAQIQKAKLPTHVEIDAATHGFDRDSVVLLEQIRTIDKQRLTDKITHLDEETMRKVSDSLQISLGLIDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCI8</accession>
    <name>A0A0D5ZCI8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3758"/>
    <dbReference type="EnsemblBacteria" id="AKA44291">
        <property type="protein sequence ID" value="AKA44291"/>
        <property type="gene ID" value="PPSC2_17570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3754"/>
    <dbReference type="HOGENOM" id="CLU_2667674_0_0_9"/>
    <dbReference type="OrthoDB" id="2079001at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8684" checksum="7EC39F82C69C5996" modified="2015-05-27" version="1">MVEVTLTFSDGSKRWSLVTTPRKLLNYFKKEMEIPGLNIKHLIIAKTIDHDDIEKILKYLEANDELTEASKAFEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4P5</accession>
    <name>E3E4P5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Methylthioribulose-1-phosphate dehydratase</fullName>
            <shortName evidence="1">MTRu-1-P dehydratase</shortName>
            <ecNumber evidence="1">4.2.1.109</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">mtnB</name>
        <name evidence="3" type="synonym">ykrY</name>
        <name evidence="3" type="ORF">PPSC2_14335</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-methyl-5-thio-D-ribulose 1-phosphate = 5-methylsulfanyl-2,3-dioxopentyl phosphate + H2O</text>
            <dbReference type="Rhea" id="RHEA:15549"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58548"/>
            <dbReference type="ChEBI" id="CHEBI:58828"/>
            <dbReference type="EC" id="4.2.1.109"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="1">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 2/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the aldolase class II family. MtnB subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.109" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371622.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01990"/>
    <dbReference type="EnsemblBacteria" id="ADO57023">
        <property type="protein sequence ID" value="ADO57023"/>
        <property type="gene ID" value="PPSC2_14335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3060"/>
    <dbReference type="eggNOG" id="COG0235">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006033_4_1_9"/>
    <dbReference type="OMA" id="IRGHGLY"/>
    <dbReference type="OrthoDB" id="599627at2"/>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00875"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046570">
        <property type="term" value="F:methylthioribulose 1-phosphate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019284">
        <property type="term" value="P:L-methionine salvage from S-adenosylmethionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01677">
        <property type="entry name" value="Salvage_MtnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001303">
        <property type="entry name" value="Aldolase_II/adducin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017714">
        <property type="entry name" value="MethylthioRu-1-P_deHdtase_MtnB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10640">
        <property type="entry name" value="PTHR10640"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00596">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01007">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03328">
        <property type="entry name" value="salvage_mtnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Aldolase_II" evidence="2">
        <location>
            <begin position="18"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="24656" checksum="BAD6FBE538A54EF7" modified="2011-01-11" version="1">MSFNLADISFEEKRRSLEELADVKELFASRNWFPGTSGNLSIRIGDFHPEQFYFAVTASGKDKTKRTPEDFLFVDQYGKAAEATNLKPSAETLIHCEIYRLTGCGAVFHVHTVFNNLISEYYGEQGFVPVQGIELIKAFNIWEENAAIQIPVLPNFADIASIAKLVPGVLNDQVPGILLRNHGIYAWGRDVFEAKKHLEAFEFLFETTYRSLLLKTSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4P9</accession>
    <name>E3E4P9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371626.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3067"/>
    <dbReference type="EnsemblBacteria" id="ADO57027">
        <property type="protein sequence ID" value="ADO57027"/>
        <property type="gene ID" value="PPSC2_14355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3064"/>
    <dbReference type="eggNOG" id="ENOG5033CFD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_138504_0_0_9"/>
    <dbReference type="OMA" id="RRWFEKP"/>
    <dbReference type="OrthoDB" id="1888138at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="156" mass="18177" checksum="5872841740D5A7F3" modified="2011-01-11" version="1">MTDQQDRPWMEGQTNDWHAYISGACSIEESTRLEKLLLEDEQALMLYLVALEQLEPTLKDYSAWMDTERFTDQVMAVLPEIEMEPNQVLFKKRRWFEKPVFHYVVAASLTLILLSSGAFDKMMPQTGDKPIPPKERVSYSEEVMQATTTWLDKLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4R6</accession>
    <name>E3E4R6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">3-methyl-2-oxobutanoate hydroxymethyltransferase</fullName>
            <ecNumber evidence="7">2.1.2.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Ketopantoate hydroxymethyltransferase</fullName>
            <shortName evidence="7">KPHMT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">panB</name>
        <name evidence="11" type="ORF">PPSC2_14440</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + 3-methyl-2-oxobutanoate + H2O = (6S)-5,6,7,8-tetrahydrofolate + 2-dehydropantoate</text>
            <dbReference type="Rhea" id="RHEA:11824"/>
            <dbReference type="ChEBI" id="CHEBI:11561"/>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="EC" id="2.1.2.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7 10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="7 10">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cofactor biosynthesis; (R)-pantothenate biosynthesis; (R)-pantoate from 3-methyl-2-oxobutanoate: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 7">Homodecamer; pentamer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the PanB family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.11" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371643.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02090"/>
    <dbReference type="EnsemblBacteria" id="ADO57044">
        <property type="protein sequence ID" value="ADO57044"/>
        <property type="gene ID" value="PPSC2_14440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3082"/>
    <dbReference type="eggNOG" id="COG0413">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036645_1_0_9"/>
    <dbReference type="OMA" id="VLVWTDM"/>
    <dbReference type="OrthoDB" id="916845at2"/>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003864">
        <property type="term" value="F:3-methyl-2-oxobutanoate hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06557">
        <property type="entry name" value="KPHMT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00156">
        <property type="entry name" value="PanB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003700">
        <property type="entry name" value="Pantoate_hydroxy_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20881">
        <property type="entry name" value="PTHR20881"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02548">
        <property type="entry name" value="Pantoate_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000388">
        <property type="entry name" value="Pantoate_hydroxy_MeTrfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00222">
        <property type="entry name" value="panB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 7 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3 7" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 11" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Alpha-ketoisovalerate binding" evidence="7 9">
        <location>
            <begin position="48"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7 8">
        <location>
            <position position="186"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 10">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9 10">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>3-methyl-2-oxobutanoate</name>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 10">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000388-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000388-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000388-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="302" mass="32504" checksum="322ED16D7EDDA5E9" modified="2011-01-11" version="1">MAGKQALNIVKMRKMKQEGIPLSMLTAYDYPSAKIAEEAGIDIILVGDSLGNVVLGYDSTIPVTLDDMVYHSRTVARGAEHTFIVADMPFMTYHSSISESLQGIRRLMQEGHAHAVKLEGGAEIADVVKATVQAGVPVLGHIGLTPQSVNQIGGYRIQGKDEADARRLMADAKALEQAGAFGIVLELVTEEVATAISKELSIPTIGIGAGRGCDGQVLVYHDLIQYASPYFSKRFVKTYADVGGMIRSSIEQYVSDVKGRAFPAAEHVFSADDRVVESLESLYGQAKGQAQEQAKEKVESQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z8</accession>
    <name>E3E4Z8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">HTH-type transcriptional regulator MntR</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Manganese transport regulator</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">mntR</name>
        <name evidence="12" type="ORF">PPSC2_15200</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Central regulator of manganese homeostasis.</text>
    </comment>
    <comment type="activity regulation">
        <text evidence="10">DNA binding is strongly activated by Mn(2+).</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the DtxR/MntR family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430946.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02820"/>
    <dbReference type="EnsemblBacteria" id="ADO57206">
        <property type="protein sequence ID" value="ADO57206"/>
        <property type="gene ID" value="PPSC2_15200"/>
    </dbReference>
    <dbReference type="GeneID" id="66576944"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3245"/>
    <dbReference type="eggNOG" id="COG1321">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069532_3_0_9"/>
    <dbReference type="OMA" id="SWDAIDR"/>
    <dbReference type="OrthoDB" id="2047422at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030026">
        <property type="term" value="P:cellular manganese ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.60.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00732">
        <property type="entry name" value="HTH_MntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001367">
        <property type="entry name" value="Fe_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036421">
        <property type="entry name" value="Fe_dep_repressor_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022687">
        <property type="entry name" value="HTH_DTXR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022897">
        <property type="entry name" value="HTH_tscrpt_reg_MntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022689">
        <property type="entry name" value="Iron_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02742">
        <property type="entry name" value="Fe_dep_repr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01325">
        <property type="entry name" value="Fe_dep_repress"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00529">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47979">
        <property type="entry name" value="SSF47979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50944">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0010">Activator</keyword>
    <keyword evidence="2 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9 10" id="KW-0464">Manganese</keyword>
    <keyword evidence="4 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0678">Repressor</keyword>
    <keyword evidence="8 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 10" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH dtxR-type" evidence="11">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="16662" checksum="41D05AA48B92E5C1" modified="2011-01-11" version="1">MPTPSMEDYLERIYQLIDEKGYARVSDIAEGLEVHPSSVTKMIQKLDKDDYLVYEKYRGLILTPKGKKVGKRLVDRHQLLEQFLDMIGVDKDLIYKDVEGIEHHLSWDSITRIETLVEYFRRDEDRLRQLHDIHKELSGDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E535</accession>
    <name>E3E535_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Sugar transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gutA</name>
        <name evidence="9" type="ORF">PPSC2_15370</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371833.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3285"/>
    <dbReference type="EnsemblBacteria" id="ADO57243">
        <property type="protein sequence ID" value="ADO57243"/>
        <property type="gene ID" value="PPSC2_15370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3283"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027408_0_3_9"/>
    <dbReference type="OMA" id="DIPYWSM"/>
    <dbReference type="OrthoDB" id="1249292at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001927">
        <property type="entry name" value="Na/Gal_symport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="PTHR11328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00792">
        <property type="entry name" value="gph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="118"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="233"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="270"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="297"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="321"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="374"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="404"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="13"/>
            <end position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="454" mass="50029" checksum="4299AAB584D7A75C" modified="2011-01-11" version="1">MLTSAAAKNNDKVSLKTLISYSLSSYGMNVIYNLTAVYLMFFYTDSFGLNALAVGTLLMVARVIDAVVDIFIGIAVDNTNTRWGKFRPYMFIGAFLVTLTTLALFLSPDLSSAGKLVYAYVTYIAWSISYSILDIPYWSLSAAITKDAAERTKVVTVPRTVASAGLWTVNVVALPLVHFFNGWAGAVAVLCGLFFVCMMFTVFGVKEKHVVPRHEKQTLKGVLRLFFVENRPLRLLIISFFIIEMTANIRNAFTLYYFKYNLGAEAFIPLFMGLTVGFQIAGNVAVPFIAKWIGKKGTSIAGVLITSISMITLFFCGNSILLVFILSCIISFGVGLNYVVMSTMLADCVDYGEWKTGNRSEGMVFSANVFRAKLAAAIGSAVGGYALALAGYQPNIVQTNTTLIWLTLLFTIIPGVLTFLSVFPMKNYELTETMNRKIVQEVRARREQGEPSVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F7</accession>
    <name>E3E5F7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">kdgT</name>
        <name evidence="2" type="ORF">PPSC2_17400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372257.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04740"/>
    <dbReference type="EnsemblBacteria" id="ADO57676">
        <property type="protein sequence ID" value="ADO57676"/>
        <property type="gene ID" value="PPSC2_17400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3717"/>
    <dbReference type="eggNOG" id="COG3181">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045683_1_1_9"/>
    <dbReference type="OMA" id="PMTLIGK"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017082">
        <property type="entry name" value="YflP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="36146" checksum="E203031FDC4EFD66" modified="2011-01-11" version="1">MKKKPWQKYVLVAAGVAMLSALSISEYVDHRTLQDHSRIFPAKPVTLVVPYAAGGGTDITARALAKAAEKHLGQPIIVVNRTGGGGSVGLMEGAEAQADGYTVTYLVAELTTLPHLGLLPITYERFKPLLQTNMDPSAITVRADAPWKTAEAFLEDARVHPGKLKMGNAGTGSIWHLAAAMLEQKSGVRFTHIPYEGAGPAVSALMSGFVDAVPVSPAEVKKYVDDGKLRILAIQADTVSEAFPEVPTLQQATGLRVHFIGTWRGLAVPKDTPNEVARTLADALIKGTKDEQFREEMRKHGLGLRVQDAEAFARQLKDSHDTFAKLIPELGLSRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5R9</accession>
    <name>E3E5R9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">VCP</name>
        <name evidence="2" type="ORF">PPSC2_18625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372524.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05845"/>
    <dbReference type="EnsemblBacteria" id="ADO57946">
        <property type="protein sequence ID" value="ADO57946"/>
        <property type="gene ID" value="PPSC2_18625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3991"/>
    <dbReference type="eggNOG" id="COG0465">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_648386_0_0_9"/>
    <dbReference type="OMA" id="AYWQITE"/>
    <dbReference type="OrthoDB" id="514605at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="220"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="48665" checksum="34468F52A3467391" modified="2011-01-11" version="1">MLSIDTPAIYEFDERTDGRITGYAAYARLIDGISEALYNRYGVKYELYASDDPNIEYWDLLEEDIRSGSPELEHVARVFDRLEERTIQYDDDGPTPEYGVHLSMRNNVFAYPKWGIALARVPFFRDNGVYNEDYVFAIGDQELQSFLAGVRGRERKQNMKRVTVFTDTSRGLSRQAEPITRAITRDDVILKAEIKRDIFRSLDQFFEADRTFYQTYNIPYKRGILLYGHPGNGKTTLVKSIANSVPGPAAYWQITEYTTSESVKEVFEAATRLAPMVLVIEDIDSMPQEVRSFFLNTLDGATSKEGIFLIGTTNYPEKIDPGLMNRAGRFDRAYEISLPDEALRLAYLKLRNFLVFAGETGTQKAAAMTDGFSLAQLGELYVSTALEWHEQGKADIELIIKGMRGELDKSRKQDWLKNVSEGRVGFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E671</accession>
    <name>E3E671_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371360.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2790"/>
    <dbReference type="EnsemblBacteria" id="ADO56756">
        <property type="protein sequence ID" value="ADO56756"/>
        <property type="gene ID" value="PPSC2_13075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2784"/>
    <dbReference type="eggNOG" id="ENOG5033SEB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082715_0_0_9"/>
    <dbReference type="OMA" id="WIDELHV"/>
    <dbReference type="OrthoDB" id="613308at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003830">
        <property type="term" value="F:beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006487">
        <property type="term" value="P:protein N-linked glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006813">
        <property type="entry name" value="Glyco_trans_17"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04724">
        <property type="entry name" value="Glyco_transf_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="34743" checksum="4DE2496BA5DC35EB" modified="2011-01-11" version="1">MKIYEFCPFFNENRIAEIKIKENASWIDELHVIEANKTFSYLDKPCNFNPGYIGPKVFHHPFHADELFRAPEEHSLYFDVDRCGADHFDHWYWSLLSHNSAFHNEACQRNRSTFILQEKVEDDDVIILADFDEIIDSRMADRIVAEVKKHHIMTIKMHYSVFFLNLFCQSNHGAPHWSYRVFAMTGRYFKSMPFSPDYLRKKGIAEALYHDIYCLKEPAGFHHSWLEYQKTALPKLQAFAANVEDKSILNAEYIDQCLQDKKLYYIDTELYVDNSKSFLSSLQELETDDLWYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6C7</accession>
    <name>E3E6C7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glycine cleavage system H protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Octanoyl/lipoyl carrier protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">gcvH</name>
        <name evidence="6" type="ORF">PPSC2_18850</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate.</text>
    </comment>
    <comment type="function">
        <text evidence="3">The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
        <text evidence="3">Binds 1 lipoyl cofactor covalently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">The glycine cleavage system is composed of four proteins: P, T, L and H.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GcvH family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57996.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324642.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06060"/>
    <dbReference type="EnsemblBacteria" id="ADO57996">
        <property type="protein sequence ID" value="ADO57996"/>
        <property type="gene ID" value="PPSC2_18850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4040"/>
    <dbReference type="eggNOG" id="COG0509">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097408_2_0_9"/>
    <dbReference type="OrthoDB" id="1773485at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005960">
        <property type="term" value="C:glycine cleavage complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019464">
        <property type="term" value="P:glycine decarboxylation via glycine cleavage system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06848">
        <property type="entry name" value="GCS_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00272">
        <property type="entry name" value="GcvH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002930">
        <property type="entry name" value="GCV_H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033753">
        <property type="entry name" value="GCV_H/Fam206"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017453">
        <property type="entry name" value="GCV_H_sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11715">
        <property type="entry name" value="PTHR11715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01597">
        <property type="entry name" value="GCV_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00527">
        <property type="entry name" value="gcvH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="5">
        <location>
            <begin position="24"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-lipoyllysine" evidence="3 4">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR617453-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57996.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="132" mass="14640" checksum="D3498B81CE0F48AA" modified="2015-05-27" version="2">MSEVKQQLWYTDEHEWVQHTVDGTLRIGITDFAQHQLGDIVFVELPGAGTTIGQGTEIGTIESVKTVSDLFAPVTGTVLKVNEALESTPELVNESPYEEGWMIEVEMSNDVEEALGKLLSAEQYEQLISDEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Q4</accession>
    <name>E3E6Q4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">HlyD7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hlyD7</name>
        <name evidence="4" type="ORF">PPSC2_20380</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372885.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07635"/>
    <dbReference type="EnsemblBacteria" id="ADO58314">
        <property type="protein sequence ID" value="ADO58314"/>
        <property type="gene ID" value="PPSC2_20380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4347"/>
    <dbReference type="eggNOG" id="COG1566">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_6_2_9"/>
    <dbReference type="OMA" id="IAQADVK"/>
    <dbReference type="OrthoDB" id="1680841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168874" evidence="2">
        <location>
            <begin position="24"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="3">
        <location>
            <begin position="46"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="86"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="203"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="445" mass="48176" checksum="174CA110DA3E3AB7" modified="2011-01-11" version="1">MNKKIIVYVLLVVALGTGGTLMAMSGKDAVSMAAQQKNTLLTADTVNVAFQGVGGKVNTIEVKEEQQVKKGDVLMTLDPVDLDLQIEKLKTDIAQADVKIKQAKDGLQNQSEKISTSEKQGQLDIQAAQAGESLLNQGTRAEDILRQKLAIEAAQQSLDAALTGVETAKRNAEIAQKTVSSRQHALDLANVNYNRIKALYDAGAGTKAELDNAKNQLDNAQIALDTAKDQVEIAKNQIIAASKQSDIAKNGIAQQQTALDKMEAGATAEERQQARIKTEKAKEALTQTSQTRKDVKNSEYNVDLLAQQKQALSVQLKTLELQRGRMVLKASTDGKVSRIVPKMGEIVSTGATGAVIETNQLYYDIYVGEDSISQFKAGGNVTSHVVALDKDVQGKVRYITSAPQYTNMRMSRDKGLSDISSFQVRVDVQRTSELLPGMTVEVVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W1</accession>
    <name>E3E6W1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_21400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373081.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4564"/>
    <dbReference type="EnsemblBacteria" id="ADO58513">
        <property type="protein sequence ID" value="ADO58513"/>
        <property type="gene ID" value="PPSC2_21400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4550"/>
    <dbReference type="eggNOG" id="ENOG50308CB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_204348_0_0_9"/>
    <dbReference type="OMA" id="KACNCES"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="6355" checksum="79CEFFC906AE31B8" modified="2011-01-11" version="1">MVNIIILLVILGYSAWVLVRFLRKSRQGACAGCSSSKSCPGCAVSSVNEDTRKTTAAHKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E712</accession>
    <name>E3E712_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8">30S ribosomal protein S3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">rpsC</name>
        <name evidence="12" type="ORF">PPSC2_22405</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 10">Belongs to the universal ribosomal protein uS3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432577.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09870"/>
    <dbReference type="EnsemblBacteria" id="ADO58714">
        <property type="protein sequence ID" value="ADO58714"/>
        <property type="gene ID" value="PPSC2_22405"/>
    </dbReference>
    <dbReference type="GeneID" id="66575586"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4750"/>
    <dbReference type="eggNOG" id="COG0092">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058591_0_2_9"/>
    <dbReference type="OMA" id="KTNPIGN"/>
    <dbReference type="OrthoDB" id="1132353at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1140.32">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01309_B">
        <property type="entry name" value="Ribosomal_S3_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004044">
        <property type="entry name" value="KH_dom_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005704">
        <property type="entry name" value="Ribosomal_S3_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001351">
        <property type="entry name" value="Ribosomal_S3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036419">
        <property type="entry name" value="Ribosomal_S3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018280">
        <property type="entry name" value="Ribosomal_S3_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07650">
        <property type="entry name" value="KH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00189">
        <property type="entry name" value="Ribosomal_S3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54821">
        <property type="entry name" value="SSF54821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01009">
        <property type="entry name" value="rpsC_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50823">
        <property type="entry name" value="KH_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00548">
        <property type="entry name" value="RIBOSOMAL_S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 10" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 8 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 8 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="KH type-2" evidence="11">
        <location>
            <begin position="38"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="24336" checksum="0FF31197984A326A" modified="2011-01-11" version="1">MGQKVNPVGLRIGIIRDWESKWYAGKDFGDLLLEDVKIREHLKKRLKDSAVSRVEIERAANRVNVTIHTAKPGMVIGKGGSEVENLRNEITKIAGGKKVHINISEIKNPELDAILVAESIAQQLERRVSFRRALKQAIQRTMRSGAKGIKTQVGGRLGGAEIARSEGYSEGTVPLHTLRADIDYGTAEAHTTYGRLGVKVWIYRGEVLPPAKKQAPQEGGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E734</accession>
    <name>E3E734_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">50S ribosomal protein L11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 12" type="primary">rplK</name>
        <name evidence="12" type="ORF">PPSC2_22500</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 9">Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.</text>
    </comment>
    <comment type="PTM">
        <text evidence="7 9">One or more lysine residues are methylated.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the universal ribosomal protein uL11 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432595.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09965"/>
    <dbReference type="EnsemblBacteria" id="ADO58736">
        <property type="protein sequence ID" value="ADO58736"/>
        <property type="gene ID" value="PPSC2_22500"/>
    </dbReference>
    <dbReference type="GeneID" id="66575567"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4770"/>
    <dbReference type="eggNOG" id="COG0080">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074237_2_1_9"/>
    <dbReference type="OMA" id="CKQFNAK"/>
    <dbReference type="OrthoDB" id="1702697at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070180">
        <property type="term" value="F:large ribosomal subunit rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00349">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00736">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000911">
        <property type="entry name" value="Ribosomal_L11/L12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036796">
        <property type="entry name" value="Ribosomal_L11/L12_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006519">
        <property type="entry name" value="Ribosomal_L11_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020783">
        <property type="entry name" value="Ribosomal_L11_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036769">
        <property type="entry name" value="Ribosomal_L11_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020785">
        <property type="entry name" value="Ribosomal_L11_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020784">
        <property type="entry name" value="Ribosomal_L11_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11661">
        <property type="entry name" value="PTHR11661"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00298">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03946">
        <property type="entry name" value="Ribosomal_L11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00649">
        <property type="entry name" value="RL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46906">
        <property type="entry name" value="SSF46906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54747">
        <property type="entry name" value="SSF54747"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01632">
        <property type="entry name" value="L11_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00359">
        <property type="entry name" value="RIBOSOMAL_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7 9" id="KW-0488">Methylation</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 7 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L11_N" evidence="11">
        <location>
            <begin position="9"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L11" evidence="10">
        <location>
            <begin position="71"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="141" mass="14889" checksum="2B9A78EAFE0625F7" modified="2011-01-11" version="1">MAKKVIKMVKLQIPAGKANPAPPVGPALGQAGVNIMAFCKEFNARTADQAGLIIPVEISVFEDRSFTFITKTPPAAVLLKVAAKIEKGSGEPNKTKVATVNRAAVRQIAEQKMPDLNAASVESAMRMVEGTARSMGITIVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E743</accession>
    <name>E3E743_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP synthase subunit delta</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">ATP synthase F(1) sector subunit delta</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">F-type ATPase subunit delta</fullName>
            <shortName evidence="6">F-ATPase subunit delta</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">atpH</name>
        <name evidence="8" type="ORF">PPSC2_23260</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="function">
        <text evidence="6">This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ATPase delta chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373435.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10750"/>
    <dbReference type="EnsemblBacteria" id="ADO58898">
        <property type="protein sequence ID" value="ADO58898"/>
        <property type="gene ID" value="PPSC2_23260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4925"/>
    <dbReference type="eggNOG" id="COG0712">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_085114_1_1_9"/>
    <dbReference type="OMA" id="MVDNIQD"/>
    <dbReference type="OrthoDB" id="1937493at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01416">
        <property type="entry name" value="ATP_synth_delta_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026015">
        <property type="entry name" value="ATP_synth_OSCP/delta_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000711">
        <property type="entry name" value="ATPase_OSCP/dsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11910">
        <property type="entry name" value="PTHR11910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00213">
        <property type="entry name" value="OSCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00125">
        <property type="entry name" value="ATPASEDELTA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47928">
        <property type="entry name" value="SSF47928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01145">
        <property type="entry name" value="ATP_synt_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0139">CF(1)</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 6" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="3 6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0813">Transport</keyword>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="11"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="181" mass="20229" checksum="772A6EC51EA8B490" modified="2011-01-11" version="1">MSRDTVVAKRYAKALYEVAEQEQTIMETEQELRAFVEAVSGDAEIRKFINSPNITEAVKLQVLASNFEGKLSASLINTIKLLIQRSRADLFESLLAGYLDIQEYKLGIAHAKVYSTYALSEQEKTAVAEEFGTREHKTIRVENIVDPSLLGGLKVVIGDTLYDGSLAGKLDRLEKSFNRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E749</accession>
    <name>E3E749_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-N-acetylglucosamine 2-epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mnaA</name>
        <name evidence="3" type="ORF">PPSC2_23290</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UDP-N-acetylglucosamine 2-epimerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373441.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10780"/>
    <dbReference type="EnsemblBacteria" id="ADO58904">
        <property type="protein sequence ID" value="ADO58904"/>
        <property type="gene ID" value="PPSC2_23290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4931"/>
    <dbReference type="eggNOG" id="COG0381">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041674_1_0_9"/>
    <dbReference type="OMA" id="VYFVGDV"/>
    <dbReference type="OrthoDB" id="1117971at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008761">
        <property type="term" value="F:UDP-N-acetylglucosamine 2-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003331">
        <property type="entry name" value="UDP_GlcNAc_Epimerase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029767">
        <property type="entry name" value="WecB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43174">
        <property type="entry name" value="PTHR43174"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02350">
        <property type="entry name" value="Epimerase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00236">
        <property type="entry name" value="wecB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase_2" evidence="2">
        <location>
            <begin position="26"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="388" mass="43889" checksum="2E7B76AC8B32FB70" modified="2011-01-11" version="1">MSKIKVMTIFGVRPEAIKMAPLILELQRHPEHIESVVCVTAQHRQMLDQVLEVFNIHPDYDLDVMKDRQTLNEISIRVLQGLEPVLREAKPDIVLVHGDTLTTFLASYAAFMQQIEVGHVEAGLRTWNKLSPYPEEMNRQLTGVLSDLHFSPTSLSAGNLRKENKPESRIYVTGNTVTDVFQYTVRQDYEHPVLDWAQGKRLILMTAHRRESQGEPHRQIFNAVKRIADEFEDIAIVYPVHPSPAVKEPAFEILGNHPRIKLIDPLDVVDLHNFYPHTHLILTDSGGLQEEAPSFGVPVLVLRDTTERPEGIEAGTLELVGTSEENVYNRTKALLTDSALYESMSQAANPYGDGQASVRIVNAILHHYGIQTERPEEFHTMFTKGVRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7I3</accession>
    <name>E3E7I3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ykuC5</name>
        <name evidence="9" type="ORF">PPSC2_13230</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56788.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885978.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2822"/>
    <dbReference type="EnsemblBacteria" id="ADO56788">
        <property type="protein sequence ID" value="ADO56788"/>
        <property type="gene ID" value="PPSC2_13230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2816"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034180_4_0_9"/>
    <dbReference type="OrthoDB" id="498436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010290">
        <property type="entry name" value="TM_effector"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05977">
        <property type="entry name" value="MFS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="134"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="217"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="253"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="280"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="304"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="335"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="369"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="1"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56788.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="404" mass="44325" checksum="A2246A5D6B643E5B" modified="2015-05-27" version="2">MFKNPYIRTIIASNALLNLGIWVRNFAILLYVTDLTHNDPVYVSLISVAEFAPIFLFAIIGGTFADRWRPKRTMVSCDLLSAASIFIVLLALWYGSWQVLLLSTFFSAILSQFSQPSAMKILKQHVAPEQLQGVMALFQSLMALFMVIGPVVGTFIYQHFGIFSSLSITGMLFLISALVLTRIPQDEQAIEIDRSTHFIEELKEGIRYVWNNRTLRTLGGTFTIIGLAVGLIQPLMVFVAIENLGQDKEFLQWPLMANGAAMLLGGGLIMGIAKKVQPQLLLATGLLVSTLTTFGVGWSHNIMLTMALQVLSGLFYPCIHIGINTMMMKNAEAAFIGRVGGALSPLFSGMMVVGMSIGGTLKRESSLYTVYIVSAGLFLVGSMLLLPLLRDRQPVQAVTSVDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7K6</accession>
    <name>E3E7K6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_13335</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371414.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01025"/>
    <dbReference type="EnsemblBacteria" id="ADO56811">
        <property type="protein sequence ID" value="ADO56811"/>
        <property type="gene ID" value="PPSC2_13335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2841"/>
    <dbReference type="eggNOG" id="COG4124">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_917785_0_0_9"/>
    <dbReference type="OMA" id="FMAFADD"/>
    <dbReference type="OrthoDB" id="1273269at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168232" evidence="2">
        <location>
            <begin position="25"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="3">
        <location>
            <begin position="201"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="32899" checksum="13C15E76B7122DF4" modified="2011-01-11" version="1">MRNTWTALLACILVLGLAAGTAEAKQGRGNGQENKQEAKASDKDRNEKSSKKDKHDEIKKNTPVAVTDDTYGESKDQKGRKGHNGYNGLLQAVENTKDKPAGAVIANLLLTKYPERLTPEQVTELELIRNSDTALTKAAELLAENGNVTDAVYMQEEAVLADVSNLESYKKLDLFSRKAGRSSGMKLFVNGEKYDAEPINRNGTTLVPFRTASEALNAKVSWDPKEKAVTVTRNGVSVKLFVNSAKAYINGQPYSIEQPASIVDGTTIVPVRVIGEALGANVKWEPESQSVVVYEQATTSEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7M3</accession>
    <name>E3E7M3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADPH dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqjM3</name>
        <name evidence="2" type="ORF">PPSC2_13425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371431.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2863"/>
    <dbReference type="EnsemblBacteria" id="ADO56828">
        <property type="protein sequence ID" value="ADO56828"/>
        <property type="gene ID" value="PPSC2_13425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2859"/>
    <dbReference type="eggNOG" id="COG1902">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012153_2_1_9"/>
    <dbReference type="OMA" id="NQRRDQY"/>
    <dbReference type="OrthoDB" id="1033671at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003959">
        <property type="term" value="F:NADPH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02932">
        <property type="entry name" value="OYE_YqiM_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044152">
        <property type="entry name" value="YqjM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43303">
        <property type="entry name" value="PTHR43303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="3"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="37744" checksum="DDC74CA35BED911E" modified="2011-01-11" version="1">MTDLFTPYQLKGLSLKNRIVMPPMCQYSVEAKDGKPTDWHYVHYVSRAVGGTGLIIVEMTAVHPDGRITDRDLGIWSDEHNPAYRKIVEEVHKYGAKIAIQLGHAGRKAEDAETPVGPSSIPFSERFKDPHTLTRAEVKELVQAYKEGARRAVEAGFDTVEIHGAHGYLIHQFHSPLTNTREDEYGQDLSLFGVEVIRAVKEVLPADMPVLMRISAKEYVQDGYDVEYIAAIGERYRDAGVDIFHISSGGEGPIGSSGGPSARAGYQVDLAHTIREKLNVPVIAVGLLDDYEDARRVVQQNEADLVAIGRAMLRDPYWALHASRALKVQADIPEPYLRGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7W7</accession>
    <name>E3E7W7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">3-isopropylmalate dehydratase large subunit</fullName>
            <ecNumber evidence="12">4.2.1.33</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Alpha-IPM isomerase</fullName>
            <shortName evidence="12">IPMI</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Isopropylmalate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 14" type="primary">leuC</name>
        <name evidence="14" type="ORF">PPSC2_14220</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 12">Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>(2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate</text>
            <dbReference type="Rhea" id="RHEA:32287"/>
            <dbReference type="ChEBI" id="CHEBI:1178"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="EC" id="4.2.1.33"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 12">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Heterodimer of LeuC and LeuD.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.33" evidence="12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371599.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01875"/>
    <dbReference type="EnsemblBacteria" id="ADO57000">
        <property type="protein sequence ID" value="ADO57000"/>
        <property type="gene ID" value="PPSC2_14220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3035"/>
    <dbReference type="eggNOG" id="COG0065">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006714_3_4_9"/>
    <dbReference type="OMA" id="CNMSIEM"/>
    <dbReference type="OrthoDB" id="749418at2"/>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003861">
        <property type="term" value="F:3-isopropylmalate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01583">
        <property type="entry name" value="IPMI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01026">
        <property type="entry name" value="LeuC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004430">
        <property type="entry name" value="3-IsopropMal_deHydase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018136">
        <property type="entry name" value="Aconitase_4Fe-4S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033941">
        <property type="entry name" value="IPMI_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00415">
        <property type="entry name" value="ACONITASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="SSF53732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00170">
        <property type="entry name" value="leuC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00450">
        <property type="entry name" value="ACONITASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01244">
        <property type="entry name" value="ACONITASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 12" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6 12" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="11 12" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="8 12" id="KW-0408">Iron</keyword>
    <keyword evidence="9 12" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="14" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 12" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="10 12 14" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase" evidence="13">
        <location>
            <begin position="8"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="347"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="407"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="410"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO57000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="474" mass="52065" checksum="F7F42DE56A3FC928" modified="2011-01-11" version="1">MSKKTMFEKIWDNHVIYQEAGKPSILYIDLHLVHEVTSPQAFEGLRLSGRKVRRPELTFATMDHNVPTKDRYNITDPISKQQIDTLTQNCRDFGVTLYDLDTVDQGVVHVMGPELGLTHPGKTIVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQCLQQAKAKTMEVRFVGRRKPGVTAKDMILGVIAKYGTDFATGYVIEYTGESIRELSMEERMTVCNMSIEGGARAGMIAPDETTFNYLRGRQHVAQGDAFEQAVAEWKELVTDEGAEFDVVLEFDVDSLIPQVTWGTSPGMGTDISSTVPIPAELPTENERKAAEKALEYMDLKPGTPITDIAIDYVFIGSCTNGRIEDLRAAAEVAKGYKVSDKVTAIVVPGSGRVKIQAEEEGLDVIFQEAGFEWREAGCSMCLAMNPDVLQPGQRCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAIHGHFVDVRDWKFKQEEVVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7W8</accession>
    <name>E3E7W8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha-amylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aml1</name>
        <name evidence="3" type="ORF">PPSC2_14225</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371600.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01880"/>
    <dbReference type="CAZy" id="CBM26">
        <property type="family name" value="Carbohydrate-Binding Module Family 26"/>
    </dbReference>
    <dbReference type="CAZy" id="GH13">
        <property type="family name" value="Glycoside Hydrolase Family 13"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57001">
        <property type="protein sequence ID" value="ADO57001"/>
        <property type="gene ID" value="PPSC2_14225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3036"/>
    <dbReference type="eggNOG" id="COG0366">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3291">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007947_0_0_9"/>
    <dbReference type="OMA" id="FMAGGDW"/>
    <dbReference type="OrthoDB" id="148706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031965">
        <property type="entry name" value="CBM26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16738">
        <property type="entry name" value="CBM26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168058" evidence="1">
        <location>
            <begin position="32"/>
            <end position="952"/>
        </location>
    </feature>
    <feature type="domain" description="Aamy" evidence="2">
        <location>
            <begin position="363"/>
            <end position="852"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="952" mass="104331" checksum="2F2803AA35B26208" modified="2011-01-11" version="1">MLRKKTGSFISWLIILSLCLNFFGLPGGASASNTDYTAAYTHSTVNALPLPTASATSTVTATYAPTASPTLPTSTQNGLTVHFKKPASWNSAIRIHYWNLNPATVPISGAWPGILMKSDGNDWYSYTIAEATGSSLIFNDSSGKQTADLSRSVKEGWYYTDNVWYDANPETPKVPVVSISPEPKTYDSAQMVTLSSTNSGDKIYYTIDGSTPTTSSTLYTTPIKVASSLTIKAIAVNSIGQTGDVSSFDYVIDLNADLQAPTITANLPAGHSGSSVTVSFNLKDNKAATTKAYYTEDGTEPTTSSKVYIHGNALDGLTGPSILISKTTTLKFLVIDGAGNQTKQSFVYNIGDKGDFREDTIYFVITSRFYDGDPSNNVHAWDDTKARNPDSDPAWRGDFKGLIQKLDYIKALGFSAIWITPVVQNASGYDYHGYHAINFAKVDPRYESAGASYQDLINAAHAKGLKVIQDIVVNHTGNFGEENLYPMFKKDPAKPDTGNNLVKTTDKLPSNYDSMTPDQQYQARLALMKTAETNNNIYHTEKSLSWESYTVQTGQIAGDCVDLNTENPAVNKYLIDTYNHYIDMGVDAFRVDTVKHVSRYIFNKYYIPAWKTRGGSDFYVFGEVATRYRDVWNSGIPAISTPFYTWKASKSYPGDGKNDYASNKMSVEQEWTDNSTTAGQPTSNNAFLIGNTYHTPDYSMKSGMDVIDFPMHWAFKTAHEAFNMRSGDQYYNDATWNVTYVDSHDYAPDQAPENQRFAGTQDTWAENLDLMFTFRGIPAIFYGSEIEFQKGAVIDPGPNAPLSKTGRAYYGDHIEGSVMVQDYGKYTNATGTLAESLNHPLAKHIRQLNLIRRAVPALQKGQYSTENVTGNLAFKRRYTDSAKGIDSFALVTISGNATFSGIPNGTYVDAVTGDSKKVTDGKITLTCSGKGNARVYVLNGSGGIGETGTYLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E803</accession>
    <name>E3E803_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">resE5</name>
        <name evidence="13" type="ORF">PPSC2_14775</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371712.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02410"/>
    <dbReference type="EnsemblBacteria" id="ADO57116">
        <property type="protein sequence ID" value="ADO57116"/>
        <property type="gene ID" value="PPSC2_14775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3153"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_2_9"/>
    <dbReference type="OMA" id="FNQMGRQ"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 13" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="12">
        <location>
            <begin position="70"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="11">
        <location>
            <begin position="127"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="250"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="484" mass="54626" checksum="C9C76CA5D1AAA938" modified="2011-01-11" version="1">MNFWRSLVGKLWITIICLVGSVLIFLGLFLLPYINRNFAAHESTEIKHLFTYTCIVGFLLTTFFALFLFTKITQPMQLLIQAANAIREGRYDTRLSLVTSDEIGELAKTFNHMSTELEATIRSLNEEKNHLSSVLRSMSDAVFTFDRSGQIILTNPPAQSLLDIWKKLEWQGRDLEEFGASVPEPLLPLFHTVMDRGEDVGDYIHVKKGSWSVQMAPLYTDNAIRGAVAVLRDITEEVKLEKMRSDFVANVSHEIRTPLSMMQGYSEALLDGMAGSPEESEELVQVIHDESLRMGRLVKDLLDLARMEAGHTDMYRQEVDVNELIERVHRKFTVRSKERGLILDYYEPDQHLLLPEADEDRLEQVLTNLLDNAFRHTPSGKKVTIAADQIRGERNELIRIRIKDEGVGIASEDLPYIFDRFYKADKARVRGEDKGTGLGLAIVRNIVEAHGGSVSAASVLGEGTEFTILLPISNKTRQGSVTSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E825</accession>
    <name>E3E825_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stage V sporulation protein AA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoVAA</name>
        <name evidence="3" type="ORF">PPSC2_14880</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371733.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02515"/>
    <dbReference type="EnsemblBacteria" id="ADO57138">
        <property type="protein sequence ID" value="ADO57138"/>
        <property type="gene ID" value="PPSC2_14880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3175"/>
    <dbReference type="eggNOG" id="ENOG502ZCB6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_098268_0_0_9"/>
    <dbReference type="OMA" id="MIVFFNH"/>
    <dbReference type="OrthoDB" id="1847833at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.480.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021997">
        <property type="entry name" value="SporV_AA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038548">
        <property type="entry name" value="SporV_AA_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12164">
        <property type="entry name" value="SporV_AA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="SporV_AA" evidence="2">
        <location>
            <begin position="8"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="24871" checksum="CB2076359A44CDEA" modified="2011-01-11" version="1">MNHSPAPIVYLRLRSRVRMIQGQDLHLGDVAHLLTEPEWEKDLLELVLKRPQKQDGNLILVDMLQIISKIRDHIPGVVVESLGKPHVLVELVERPRKPSKILFVLVWLLLFFGSALTIMNFHADVSMMEVQVRIVEMITGQKDEHPYLFQIAYSIGIGFGMIVFFNHLFKKKWNEEPTPLEVEMYLYQENVDQYVVAEEYEKMARLQPKDKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8F3</accession>
    <name>E3E8F3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UDP-N-acetylglucosamine 1-carboxyvinyltransferase</fullName>
            <ecNumber evidence="7">2.5.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Enoylpyruvate transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">UDP-N-acetylglucosamine enolpyruvyl transferase</fullName>
            <shortName evidence="7">EPT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">murA</name>
        <name evidence="9" type="synonym">murA3</name>
        <name evidence="9" type="ORF">PPSC2_16595</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>phosphoenolpyruvate + UDP-N-acetyl-alpha-D-glucosamine = phosphate + UDP-N-acetyl-3-O-(1-carboxyvinyl)-alpha-D-glucosamine</text>
            <dbReference type="Rhea" id="RHEA:18681"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:68483"/>
            <dbReference type="EC" id="2.5.1.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the EPSP synthase family. MurA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.7" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57502.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025365343.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03930"/>
    <dbReference type="EnsemblBacteria" id="ADO57502">
        <property type="protein sequence ID" value="ADO57502"/>
        <property type="gene ID" value="PPSC2_16595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3542"/>
    <dbReference type="eggNOG" id="COG0766">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027387_0_0_9"/>
    <dbReference type="OrthoDB" id="537477at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008760">
        <property type="term" value="F:UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019277">
        <property type="term" value="P:UDP-N-acetylgalactosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01555">
        <property type="entry name" value="UdpNAET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00111">
        <property type="entry name" value="MurA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001986">
        <property type="entry name" value="Enolpyruvate_Tfrase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005750">
        <property type="entry name" value="UDP_GlcNAc_COvinyl_MurA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00275">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="SSF55205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01072">
        <property type="entry name" value="murA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 7" id="KW-0132">Cell division</keyword>
    <keyword evidence="3 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="7" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EPSP_synthase" evidence="8">
        <location>
            <begin position="7"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoenolpyruvate binding" evidence="7">
        <location>
            <begin position="22"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="305"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="327"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="2-(S-cysteinyl)pyruvic acid O-phosphothioketal" evidence="7">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57502.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="46368" checksum="F5D5496C8F138B06" modified="2015-05-27" version="2">MDKLVIEGGRPLSGTIRIHGAKNAALPILAASLLAQGKVEIRNVPHLLDIKVMLHILERLGCTCRHEEETVYVDTSSVRTFQIPEDLMKQMRSSIFLMGPLLARYGEVSIYQPGGCAIGERKIDLHLEGLKALGAEIEEKDEQITFRARKLIGSDIHMDFPSVGATENIMMAAALAEGRTTITNAAREPEIQDLQNFLNAMGAHIIGAGTDTITITGVSQLNPCTYEVIPDRIVAGTVMIAAAATRGSVSLTHCNPSHLSALIHVLRRAGVQIGILNDIMTVSCMSRPKAVERIVTSPYPSFPTDLQSQVMVLLSLADGFSVMKETVFESRFKHVDELNVMGADITVDANAAFIRGVSRLYGATVEATDLRAGAALVIAGLAAQGRTIVEQVHHIDRGYDRIERLFQGLGARMSRQSPVPEQLDFVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L1</accession>
    <name>E3E8L1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phosphate starvation protein PhoH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">phoH3</name>
        <name evidence="4" type="ORF">PPSC2_16860</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372143.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04195"/>
    <dbReference type="EnsemblBacteria" id="ADO57560">
        <property type="protein sequence ID" value="ADO57560"/>
        <property type="gene ID" value="PPSC2_16860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3599"/>
    <dbReference type="eggNOG" id="COG1702">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051654_0_0_9"/>
    <dbReference type="OMA" id="PAQMKMV"/>
    <dbReference type="OrthoDB" id="445854at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003714">
        <property type="entry name" value="PhoH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02562">
        <property type="entry name" value="PhoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PhoH" evidence="3">
        <location>
            <begin position="113"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="35664" checksum="9D0683B7A71A02B8" modified="2011-01-11" version="1">MAEQQRSIQIALNSAGEGQALFGPQDSFLKLIEAAIPAKIASREAEINVFGDAHEVEVLEQLFDVLLQLIRNGYILTERDVHYAIELAKDLRADQLLDLFKGEITTTFRGKPIRVKTIGQKHYVTTIKKRDIVFGIGPAGTGKTYLAVVLAVAALKEGSVKRIVLTRPAVEAGENLGFLPGDLQEKVDPYLRPLYDALYDVMGPEQTAKALERGLIEIAPLAYMRGRTLDDSFIILDEAQNTTPEQMKMFLTRLGFGSKMVITGDVTQIDLPRGKKSGLIEANAILKGIDEIGFVQFAEEDVVRHSLVQKIIVAYDRVAENQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8P0</accession>
    <name>E3E8P0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372329.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3795"/>
    <dbReference type="EnsemblBacteria" id="ADO57749">
        <property type="protein sequence ID" value="ADO57749"/>
        <property type="gene ID" value="PPSC2_17740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3792"/>
    <dbReference type="eggNOG" id="ENOG5033EBY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061528_1_0_9"/>
    <dbReference type="OMA" id="ITCAVEN"/>
    <dbReference type="OrthoDB" id="1408709at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021352">
        <property type="entry name" value="DUF2971"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11185">
        <property type="entry name" value="DUF2971"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="37376" checksum="DFA5D764B8F59F04" modified="2011-01-11" version="1">MSNSLYHYCSNDTFLNIIKNKTIRLSDISKSNDYKETKWLFEYIGEEIVRQYKEHSFFRGQLIYGLDEVTSLELIVKSIKEKMLERSEELFYVACFSEEGDKLSQWRGYADDGYGLSIGFSIDSLKTLINKEESLKLLQVEYPEKNNNSSSEKIRKHSKDILQSVLHAITEGDTKKIFSRETYAIDVFHEISSRIFIQESIKYKNPSFKEEAEWRIVFDDELDKYTNWEDWYDEVEDKSLLSGDMAVLFPNGLQFKAYRNRIVSFFDLSFKAYAKNIINEIIIGPKSDIQEGDIYQILSYYGYEATDINIIKSKSTYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8R5</accession>
    <name>E3E8R5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372354.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3820"/>
    <dbReference type="EnsemblBacteria" id="ADO57774">
        <property type="protein sequence ID" value="ADO57774"/>
        <property type="gene ID" value="PPSC2_17865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3817"/>
    <dbReference type="HOGENOM" id="CLU_2438054_0_0_9"/>
    <dbReference type="OMA" id="YCLFHIG"/>
    <dbReference type="OrthoDB" id="1824021at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="12487" checksum="87398CF4FC344B38" modified="2011-01-11" version="1">MGWEYGIKVADVKDIKALMERLAEALPRIEGYRMQRDEDGFVLLQNNSDWPEALQISVEEARNIEGLEDDEPYIYCLFHIGGGDAMRLREGMCRALEEEKCAADWFEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8X3</accession>
    <name>E3E8X3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Preprotein translocase subunit YajC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yajC</name>
        <name evidence="9" type="ORF">PPSC2_19200</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YajC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372646.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06400"/>
    <dbReference type="EnsemblBacteria" id="ADO58071">
        <property type="protein sequence ID" value="ADO58071"/>
        <property type="gene ID" value="PPSC2_19200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4113"/>
    <dbReference type="eggNOG" id="COG1862">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_116157_5_2_9"/>
    <dbReference type="OMA" id="GMEMIIM"/>
    <dbReference type="OrthoDB" id="2082059at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003849">
        <property type="entry name" value="Preprotein_translocase_YajC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33909">
        <property type="entry name" value="PTHR33909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02699">
        <property type="entry name" value="YajC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01853">
        <property type="entry name" value="YAJCTRNLCASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01323">
        <property type="entry name" value="YajC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00739">
        <property type="entry name" value="yajC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="111" mass="12136" checksum="4041503505A431F3" modified="2011-01-11" version="1">MFHFATAAAAPGGAGGLFQMIWPLALMFVIFYFLLIRPNQKKQKQRQSMLQALKKGDKVITIGGLHGTIVEITDDVVVLRVNDVTKLTFDRSAISNAIAKDTASEEVVSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Z5</accession>
    <name>E3E8Z5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tcyJ</name>
        <name evidence="8" type="ORF">PPSC2_24665</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373735.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12160"/>
    <dbReference type="EnsemblBacteria" id="ADO59202">
        <property type="protein sequence ID" value="ADO59202"/>
        <property type="gene ID" value="PPSC2_24665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5225"/>
    <dbReference type="eggNOG" id="COG0834">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_18_5_9"/>
    <dbReference type="OMA" id="HIPARFA"/>
    <dbReference type="OrthoDB" id="1632224at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-0564">Palmitate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168717" evidence="6">
        <location>
            <begin position="30"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="7">
        <location>
            <begin position="35"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="269" mass="29445" checksum="A6B6596AB2DD794A" modified="2011-01-11" version="1">MKKSALVAAIGLSLVLLTGALSGCSSKEAASGDKVLYVGTQNDYPPFAFTNDKNELTGYDVEVVKEIDKKLDGYKIEFVPSGWDAIFLALDANKVQIIADEVAKNPEREKKYLFSDESYFSAQSVIIVKKGRTDIHSLKDLEGKKVAASVGDSYTQLLEQYNAKNGNKIILKYNDTGTSSDNLQDVQNGRVDAYVNDPVMAAATIKKEGLQVEAVGEPVQSDNINLVFKKDKQGEELKAKIDPIIKELKADGTLKKLSEQWTGGEFIPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E934</accession>
    <name>E3E934_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutathione peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gpo</name>
        <name evidence="6" type="ORF">PPSC2_24825</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glutathione peroxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373774.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5304"/>
    <dbReference type="EnsemblBacteria" id="ADO59241">
        <property type="protein sequence ID" value="ADO59241"/>
        <property type="gene ID" value="PPSC2_24825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5262"/>
    <dbReference type="eggNOG" id="COG0386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029507_2_2_9"/>
    <dbReference type="OMA" id="RYSRTFH"/>
    <dbReference type="OrthoDB" id="1635499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004602">
        <property type="term" value="F:glutathione peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00340">
        <property type="entry name" value="GSH_Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000889">
        <property type="entry name" value="Glutathione_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029760">
        <property type="entry name" value="GPX_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592">
        <property type="entry name" value="PTHR11592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00255">
        <property type="entry name" value="GSHPx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000303">
        <property type="entry name" value="Glutathion_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01011">
        <property type="entry name" value="GLUTPROXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00763">
        <property type="entry name" value="GLUTATHIONE_PEROXID_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51355">
        <property type="entry name" value="GLUTATHIONE_PEROXID_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 5 6" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="4">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000303-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="181" mass="20834" checksum="0FF57FC251827343" modified="2011-01-11" version="1">MSVYDFQATLINGKPIEFSNYRGKVLLIVNTASMCSFSSQFADLQKLYERRREQGFEILAFPCNQFNEKEPGSNSEVQTFCQNNHGLTFPLFEKTDVRGLSAHPLFQYLTQQSPFQGFDTQTKDGQWMDDFLRDKYPEIYVGDGIKWNFSKFLINRDGHVKGRFEVTTAPCAIDPVIESLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9A1</accession>
    <name>E3E9A1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371960.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57374">
        <property type="protein sequence ID" value="ADO57374"/>
        <property type="gene ID" value="PPSC2_15990"/>
    </dbReference>
    <dbReference type="GeneID" id="66576777"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3416"/>
    <dbReference type="eggNOG" id="ENOG503064E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2736242_0_0_9"/>
    <dbReference type="OMA" id="IHMSSGF"/>
    <dbReference type="OrthoDB" id="1923329at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="71" mass="8180" checksum="8CF39ECC53E8A113" modified="2011-01-11" version="1">MLVHGKTRRGNLYIHMSSGFHKIGDFREEYSVAPGDRLMSRLTKRIYTIVSVHLGEEAYADLDLEEVIRNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9C3</accession>
    <name>E3E9C3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ytdP1</name>
        <name evidence="5" type="ORF">PPSC2_16090</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371982.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03780"/>
    <dbReference type="EnsemblBacteria" id="ADO57396">
        <property type="protein sequence ID" value="ADO57396"/>
        <property type="gene ID" value="PPSC2_16090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3438"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019175_2_0_9"/>
    <dbReference type="OMA" id="YKFYYKL"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="282"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="395"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="651"/>
            <end position="749"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="753" mass="86989" checksum="4C7D49D0A84CFE4E" modified="2011-01-11" version="1">MKKGRMFYTIFITILVLGIGLVASFGSYIYFTTISSVVERVSNTKQSYMAQIRNSLEQKIQTIEYAFNTYSTTSSFNEVVKNPITEKDFVAYRNVNTQLNYIATMGLEGTEYSLISLNQNWRISNGSLSYLTKTERERLISTYIDHQDKGLFWIKTDKGIRFVNTLPVFSKKKQAIALSDISSQTLSHTIQTEDHMPVIILNNKGDLMYETEPATPLLSTQQLQHISEVTAKSDNTGMLTLEKTEHQPARQIIYAKSAYNNWTYLTVLDKKEIANAFQTTKFGIIMMGLVLTLLIVVVAYIIAIYFTKPFQQIKRSLPKNPNFAFKNEPSKNEIEWIINSIDNIVTEKESLESLIQSEMPQLETQLILNLFRKRISAEELARKMPRLGYPQIENQMYITLLVQLDNLGDREPSDKDILLLAINKIVEETIPEQQRMLPIILNDNTQATILILAGKSAQEMRKQVLDRAALLIQHVKEYLNVSISIGISTAYDNLLESKEACEMSKQALHHRLNLGKESIIFYEDISMVISGPVLLHYPAELESKLFDAIRIGDEEQVYHTVHSLLAEMMTKNNHSMNFEVLLVRFVNNLIQLEQLLGIEVLLTQDNHALYHRLLDIRNPEEIERMLLEQVIFPMVKSMKEKTNQQFRCLSEKIAAIIRAEYDQELSLELIGDRLHYNPNYLSSIFKKEYGTTFSEYLMGYRLQMSKKWLVETDMTIKEIAERLQYHNSQNFIRSFRKKEQVTPGAYRKMKQAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9S7</accession>
    <name>E3E9S7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372446.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3915"/>
    <dbReference type="EnsemblBacteria" id="ADO57867">
        <property type="protein sequence ID" value="ADO57867"/>
        <property type="gene ID" value="PPSC2_18290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3911"/>
    <dbReference type="HOGENOM" id="CLU_2105475_0_0_9"/>
    <dbReference type="OrthoDB" id="1985327at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028964">
        <property type="entry name" value="Imm8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15586">
        <property type="entry name" value="Imm8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="12840" checksum="3288C2F77F716335" modified="2011-01-11" version="1">MLIIKALTKMYEDWGEDIDDFYITYNVDIGPSEINGASDMFSFELISPKRLDRMADQGDIIIGHGHFIAKDFNENTLEATLNRIINKYTDDDINKAYKNLSTYFRREMDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9T0</accession>
    <name>E3E9T0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glutamate decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sidD</name>
        <name evidence="7" type="ORF">PPSC2_18300</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5 6">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the group II decarboxylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372449.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05630"/>
    <dbReference type="EnsemblBacteria" id="ADO57870">
        <property type="protein sequence ID" value="ADO57870"/>
        <property type="gene ID" value="PPSC2_18300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3914"/>
    <dbReference type="eggNOG" id="COG0076">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011856_0_4_9"/>
    <dbReference type="OMA" id="NPGFNWS"/>
    <dbReference type="OrthoDB" id="1478871at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010977">
        <property type="entry name" value="Aromatic_deC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002129">
        <property type="entry name" value="PyrdxlP-dep_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021115">
        <property type="entry name" value="Pyridoxal-P_BS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00282">
        <property type="entry name" value="Pyridoxal_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00800">
        <property type="entry name" value="YHDCRBOXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00392">
        <property type="entry name" value="DDC_GAD_HDC_YDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="4 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="5">
        <location>
            <position position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR602129-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="475" mass="53021" checksum="935BA48A9EC109C6" modified="2011-01-11" version="1">MMNQEPNQQLGEIIERFIHSYMAENNNIRSQKVINTADEETIAHLRKIGFPKKGRPVKEVVDEMRKNVYSHQTFMQHPRFFALVPSPMSLYSWLGDIMTSAYNTHAGSWMQSSSASLLEGEVIRWMCDQAGYPDTAGGLFLSGGSLSNLTALAAARNAKLSEQEYAIGTAYVSDQTHSSVAKGLRILGFRSDQIRKVPSDKNFRMDVSALEKKIMDDQAAGMKPFAVIATAGTTNTGSIDPLNKIADLCEKHNIWLHVDGAYGASILASSKYKSLLSGISRSDSITWDAHKWLMQTYSCSVVLAKDKQQLKNCFSTRPEYLKDAETDEEHINYWDLGPELTRPARSLKLWVTLQALGTDAVGEAIEHGVQLAEWAEDEIKKHNHWEIVCPAQLAIVNFRYAPPGLSDQELDSLNKRISQEMVTNGYATVLTTQLNGKTVLRICAIHPDTTEDEIRNTIQLLSNIARSLNEKKALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA13</accession>
    <name>E3EA13_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR6</name>
        <name evidence="6" type="ORF">PPSC2_19625</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372718.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06845"/>
    <dbReference type="EnsemblBacteria" id="ADO58146">
        <property type="protein sequence ID" value="ADO58146"/>
        <property type="gene ID" value="PPSC2_19625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4185"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_0_9"/>
    <dbReference type="OMA" id="RANEWET"/>
    <dbReference type="OrthoDB" id="664909at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="36861" checksum="1CB206235A866BA4" modified="2011-01-11" version="1">MSNLDQIAKLAGFSKATVSRVLNQSPHVSHETRTKILKIMQELDYVPNRNAISLSKGQTLQIGIITSTINEIVLAFLDSFVEIAGQYEFQTIIYTSGEDKKKELQAFEDLKRKRVDALVIISCVNDTDFLSTYCKYGPIVAWQRMEHTDIRSVAMDQYEGYMLALKHLIQKGYTRIANAFGRPSSINTHSRQRAYEQIMSEHNLPVLQHWNYSSIYNIRDGEQVVRNLLQHREEFPEAILCANDYVAVGILCEARRQLLKVPEDLAIIGFDNTELAHTMGITTVQNPIMAQAQNAFFMLSPQLIGRQMELHSLEYSLIERTTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA29</accession>
    <name>E3EA29_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exopolyphosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ppx</name>
        <name evidence="2" type="ORF">PPSC2_20410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372892.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07665"/>
    <dbReference type="EnsemblBacteria" id="ADO58321">
        <property type="protein sequence ID" value="ADO58321"/>
        <property type="gene ID" value="PPSC2_20410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4354"/>
    <dbReference type="eggNOG" id="COG0248">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025908_4_2_9"/>
    <dbReference type="OMA" id="RISEGCY"/>
    <dbReference type="OrthoDB" id="1862004at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003695">
        <property type="entry name" value="Ppx_GppA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02541">
        <property type="entry name" value="Ppx-GppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ppx-GppA" evidence="1">
        <location>
            <begin position="19"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="511" mass="56995" checksum="FEB65B37CB95066F" modified="2011-01-11" version="1">MNSKIGIMDIGSNSIRLVIYEMTETGAYRIVQECKEAARLSEKVGANGRMEREAIRSIAPLLRQFMEVCRMHGVVRMRAAATAAIRNAANSDEIVQWIAEETDLTLEILSGEQEGYAGFLGVVNTMNVSDGIIIDIGGGSTEITLFRDRTRLHTVSFPFGAVNMNWRFGREVKNGEWSPGQIEEMESFVRSSLQNHDWIFSNPGLPFIGLGGTLRTLAKINQKRRDYSLPVTHHYEMTIEDVDYFYSSLPHLPYEKRKKTAGLSKDRADIIVPGLIILKTIFEAAQGSAYLVSGAGLRDGLFHELVNAEQPVVANPLIASIRNILSFAVPVSEAHVKRVNEYAVRLYDTLAEGTSIAMDKRLLLTAATLYKTGAALNYYHFRQHSVFWILHAGIGGLSHRETVLAALIADYHPKNRTPRLLRTHADILEPSDEERVHRLGSLLQLAIGMDRSESGIITSIHPTTGDDALHIRLESRSEPILEQRDLVAVAKDFQKAWNLTLSWSILPSSSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA34</accession>
    <name>E3EA34_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">1,4-dihydroxy-6-naphtoate synthase</fullName>
            <ecNumber evidence="3">4.1.-.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Menaquinone biosynthetic enzyme MqnD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mqnD</name>
        <name evidence="4" type="ORF">PPSC2_20430</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Quinol/quinone metabolism; menaquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the MqnA/MqnD family. MqnD subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372897.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07685"/>
    <dbReference type="EnsemblBacteria" id="ADO58326">
        <property type="protein sequence ID" value="ADO58326"/>
        <property type="gene ID" value="PPSC2_20430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4358"/>
    <dbReference type="eggNOG" id="COG2107">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070326_0_0_9"/>
    <dbReference type="OMA" id="RGCGPLV"/>
    <dbReference type="OrthoDB" id="1107067at2"/>
    <dbReference type="UniPathway" id="UPA00079"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016830">
        <property type="term" value="F:carbon-carbon lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009234">
        <property type="term" value="P:menaquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00996">
        <property type="entry name" value="MqnD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003773">
        <property type="entry name" value="Menaquinone_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030869">
        <property type="entry name" value="MqnD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37167">
        <property type="entry name" value="PTHR37167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02621">
        <property type="entry name" value="VitK2_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0474">Menaquinone biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="53"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="110"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="30846" checksum="2F38AAB10671D704" modified="2011-01-11" version="1">MQIAFSPCPNDTFVFHALAHGLIPGAPALDITFADIDITNNLAITPDGLDIMKISYAALPWVLDEYALLPCGGALGRGCGPLVLTKEDSTVKGPEALSGKRVAVPSERSTAYLLFRLWAAKHVPGGVGEIVVMPFDQIMPAVRDGHIDAGLVIHEARFTYPSYGLSKQVDLGNWWEEDTGLPIPLGAIIARRTLDLDAITNWIRASVEYAWKHPEASREYVLSHAQELSPDVAQSHIDLYVNDFTANLGDSGYAAIEALLGRAAQEGLVPSFDLAKLRLTSTTTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAJ1</accession>
    <name>E3EAJ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Twitching motility protein PilT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yacL</name>
        <name evidence="4" type="ORF">PPSC2_22560</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ycf81 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373288.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10025"/>
    <dbReference type="EnsemblBacteria" id="ADO58749">
        <property type="protein sequence ID" value="ADO58749"/>
        <property type="gene ID" value="PPSC2_22560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4782"/>
    <dbReference type="eggNOG" id="COG4956">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050839_0_0_9"/>
    <dbReference type="OMA" id="RIPMNEM"/>
    <dbReference type="OrthoDB" id="940436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002716">
        <property type="entry name" value="PIN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002792">
        <property type="entry name" value="TRAM_dom"/>
    </dbReference>
    <dbReference type="SMART" id="SM00670">
        <property type="entry name" value="PINc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50926">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="44"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="112"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="TRAM" evidence="3">
        <location>
            <begin position="290"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="361" mass="39270" checksum="4CC2DB2022460F05" modified="2011-01-11" version="1">MWRKAILTFTGLCGAWFGYTLYQRIGGIVSWMPQWLSDGSLPGIAVWMLAGAVLFMAGCSFAGASVANRLQQSIEGLVRIPMNEMMAGVMGLAVGLILSLAVYPLFSGLGAPGLLIQTAVTLVCGYVGLMVGLEKRDELSSFWSSGFFGRGADVEERKLEEHKILDTSVIIDGRIADICKTGFIEGTIVIPEFVLEELQHIADSSDLLKRNRGRRGLDILNKIQKELDVNVLIYEGDFEEISEVDSKLVKLAKVLQGKVVTNDFNLNKVCELQGVSVLNINDLANAVKPVVLPGEEIMVQIIKDGKEHGQGVAYLDDGTMIVVEGGRDYIGSLMEVLVTSVLQTSAGRMIFAKPKLLEKAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAP9</accession>
    <name>E3EAP9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 9">Cell division protein FtsX</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ftsX</name>
        <name evidence="13" type="ORF">PPSC2_22845</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373346.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10320"/>
    <dbReference type="EnsemblBacteria" id="ADO58807">
        <property type="protein sequence ID" value="ADO58807"/>
        <property type="gene ID" value="PPSC2_22845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4838"/>
    <dbReference type="eggNOG" id="COG2177">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073546_2_2_9"/>
    <dbReference type="OMA" id="ETGIMRL"/>
    <dbReference type="OrthoDB" id="1653234at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004513">
        <property type="entry name" value="ABC_transpt_FtsX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040690">
        <property type="entry name" value="FtsX_ECD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47755">
        <property type="entry name" value="PTHR47755"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18075">
        <property type="entry name" value="FtsX_ECD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003097">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="9 13" id="KW-0132">Cell division</keyword>
    <keyword evidence="5 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="180"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="226"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="275"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX_ECD" evidence="12">
        <location>
            <begin position="59"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="11">
        <location>
            <begin position="208"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021907"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR003097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF18075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="33992" checksum="C348ED297665E0A4" modified="2011-01-11" version="1">MTFNTFLRHMREGFKNIFRNGWMSVASVTSIIVSLLILGVFIMLVLNVNSLADQADSQVEVNVFLELNVDQSMRETLQKEIAAMPEISKTTFVTKAQGLEELRKDLGDSGKDLLEGFDKDSNPLPDKIVVEVIEPTTVPFVAEKIEKLNTLHPEKPILKVRYGKGTVETLFTITKLIRNVGFIFVAGLAIMSMFLISNTIRVTILARRREISIMKLVGATNFFIRWPFFIEGALIGLIGSLITVGILFTGYQRLLTAVQGDIALNMLKLMPLEGIWIQLSALLVILGMLVGIVGSTLSMRKFLKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB79</accession>
    <name>E3EB79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Peptide ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yxdM</name>
        <name evidence="8" type="ORF">PPSC2_20835</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-4 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372980.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4462"/>
    <dbReference type="EnsemblBacteria" id="ADO58411">
        <property type="protein sequence ID" value="ADO58411"/>
        <property type="gene ID" value="PPSC2_20835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4443"/>
    <dbReference type="eggNOG" id="COG0577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022800_3_0_9"/>
    <dbReference type="OMA" id="NWLEQKF"/>
    <dbReference type="OrthoDB" id="366413at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027022">
        <property type="entry name" value="ABC_permease_BceB-typ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF018968">
        <property type="entry name" value="ABC_permease_BceB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="102"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="152"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="196"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="248"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="299"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="550"/>
            <end position="573"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="603"/>
            <end position="625"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="637"/>
            <end position="661"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="7">
        <location>
            <begin position="86"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR018968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="670" mass="77150" checksum="0C8EE95B294B5B23" modified="2011-01-11" version="1">MHMSFRLLAWNNLKRNARAYVPYYLSSSLMITIFFVYAVFIFHPDVSNVITAANVKKGLQVADLLIFVFSFFFVLYTNNIFVAARKKEFGILTILGASHRQICFLVAFENLIIGFLSLVTGMIGGFVSAKFFLLMGSNVTGMYLRFYFPWKALAFTGIGFMFLFILISLVSVFFIRRFKLQQLFSKAPQLNKEPKAFWSLSILAIVLIGAAVYLMKLDFSPYIYLAPYRLGTLSFYILHYSVGDTFKYTIISGSLGIYLFYTQSCVLFIQLLRANRKWSWSGSRLLWLSEITYKMRNNAGLFSLITLISIISCVGAASTFDSMQQQKRFLREQSYSFAFTSDVVSSNELEKEIDQNLYTAGVDYGKGEVLVFPFREQIAPVMKQSNYEALASKFKKLKQVPTLRENQGFFIIDPNEMPLEEKKTFFEKKLTYKQGKSHMMNLEIMDTKTIDHNLKFDGNIVSELGRLLVVSDRTYDYLIEHRYFNDPLAFKSTYYFVPKWKNGQLSLETSETQQEVWLYSVLANKVNKGVLNSRAVDYLTSEMDLVISEFIGGFIAIIMLASTVSLLYFRLYVDLQRDEEIYRALSKIGLNSREMRQSASRQIAFLFLLPLVVSSMGMVLCLVMSEPSVIYGVPVHLTLIQIMLCFWAIQFLSFLIVRSLYLRQLDLKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBB1</accession>
    <name>E3EBB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_20990</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373012.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4494"/>
    <dbReference type="EnsemblBacteria" id="ADO58443">
        <property type="protein sequence ID" value="ADO58443"/>
        <property type="gene ID" value="PPSC2_20990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4479"/>
    <dbReference type="eggNOG" id="COG0582">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2494995_0_0_9"/>
    <dbReference type="OrthoDB" id="785253at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9602" checksum="B86834C52CED727C" modified="2011-01-11" version="1">MKIKLIVANLPDLVESPKKNNYVVSFYNAEELNQLLAVIRGERIELSVILAAFYGLSRSEVLGLKWSAIDLLNWTINIKHTATSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBB4</accession>
    <name>E3EBB4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptide ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">perR1</name>
        <name evidence="3" type="ORF">PPSC2_21085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Fur family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373015.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08315"/>
    <dbReference type="EnsemblBacteria" id="ADO58446">
        <property type="protein sequence ID" value="ADO58446"/>
        <property type="gene ID" value="PPSC2_21085"/>
    </dbReference>
    <dbReference type="GeneID" id="66575846"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4483"/>
    <dbReference type="eggNOG" id="COG0735">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096072_4_2_9"/>
    <dbReference type="OMA" id="YLYGVCT"/>
    <dbReference type="OrthoDB" id="1630127at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07153">
        <property type="entry name" value="Fur_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002481">
        <property type="entry name" value="FUR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043135">
        <property type="entry name" value="Fur_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33202">
        <property type="entry name" value="PTHR33202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01475">
        <property type="entry name" value="FUR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="143" mass="16230" checksum="EB0A8E70D123F4E8" modified="2011-01-11" version="1">MAARVQHALELLKKTGVRITPQRHAILNYLMESMGHPTADEIYRALESKFPSMSVATVYNNLKMFIEAGMVHELTYGDNASRYDANISEHYHIICEKCGKIEDFSYPYLADVERHAALETGFEVHGHRMELHGVCKACSNKQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBF2</accession>
    <name>E3EBF2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytcD7</name>
        <name evidence="2" type="ORF">PPSC2_21940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373192.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4680"/>
    <dbReference type="EnsemblBacteria" id="ADO58626">
        <property type="protein sequence ID" value="ADO58626"/>
        <property type="gene ID" value="PPSC2_21940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4668"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_1_9"/>
    <dbReference type="OMA" id="EYTISEY"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="10"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="15472" checksum="E0F3B226FC8CFAF0" modified="2011-01-11" version="1">MEDKAKTYMLGIEATLEVISGKWKGIILHHLTSGRKRTYELRQLIPKITQKVLTQQLRELEKDGIIHRIIYNQVPPKVEYELSEYGWDFKDLLDRFCLWGEDHLDRIYGDKTKVLEEYSVKEKNAKQAPPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBU0</accession>
    <name>E3EBU0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Holin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ywbH</name>
        <name evidence="7" type="ORF">PPSC2_24030</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373599.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11535"/>
    <dbReference type="EnsemblBacteria" id="ADO59064">
        <property type="protein sequence ID" value="ADO59064"/>
        <property type="gene ID" value="PPSC2_24030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5086"/>
    <dbReference type="eggNOG" id="COG1380">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113736_3_2_9"/>
    <dbReference type="OMA" id="NWVRAGA"/>
    <dbReference type="OrthoDB" id="1846131at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005538">
        <property type="entry name" value="LrgA/CidA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33931">
        <property type="entry name" value="PTHR33931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03788">
        <property type="entry name" value="LrgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="34"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="123" mass="13653" checksum="4E7F469E584B2FB9" modified="2011-01-11" version="1">MKSFIRGVLQIAVLMAFSLILNAVVSWLHLPIPGSIVGMLILFILLQTRVVRLSWIEVGANWLLAELLLFFIPSAVGVMNYWPMLEHDGMSIMLVVLLGTFLVMACTGMIASLLGKRKEHKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBV2</accession>
    <name>E3EBV2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yycB3</name>
        <name evidence="9" type="ORF">PPSC2_24090</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59076.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324876.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11595"/>
    <dbReference type="EnsemblBacteria" id="ADO59076">
        <property type="protein sequence ID" value="ADO59076"/>
        <property type="gene ID" value="PPSC2_24090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5099"/>
    <dbReference type="eggNOG" id="COG2807">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038046_1_0_9"/>
    <dbReference type="OrthoDB" id="806182at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="58"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="109"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="146"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="175"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="221"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="259"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="287"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="312"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="353"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="375"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="19"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO59076.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="412" mass="44089" checksum="E2013A01603AF7AB" modified="2015-05-27" version="2">MSSQQHQRALVYKSLWHAGPWLLAVGIILVGANLRASITSVGPLIGLIKDSLHISNTLSGLLTTLPLLAFALLSPFVAQLSRRFGSPLVIFAALLLLTAGIVVRSTLGVTALFVGTAMLGLAIAVCNVLLPSLIKEEFPRNSGLMTGVYSVSMNVVAATASGLSIPLALNGGMGWRGALGIWAIIGVVGILLWVPQLLKVRRTANQAVVSARTVNVYKSSLAWKVTLFMGLQSALFYVPAAWFPEMMSGQGMDSETAGWMLSVLQFSQMPFTFIVPIWAARVKDQRLLVLIMAVLYFIGLGGFLLGATQWSVVWVICIGIAGGFAFPLVMMFFNLRTRTPQQAAELSGMAQSFGYLLAATGPTLFGYLHDATQGWTIPLLLLLCLSVLLMFIGLGAAKKRYVGGEVDDQAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW8</accession>
    <name>E3EBW8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373627.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5154"/>
    <dbReference type="EnsemblBacteria" id="ADO59092">
        <property type="protein sequence ID" value="ADO59092"/>
        <property type="gene ID" value="PPSC2_24160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5115"/>
    <dbReference type="eggNOG" id="ENOG50337K3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1203873_0_0_9"/>
    <dbReference type="OMA" id="RGYSFKE"/>
    <dbReference type="OrthoDB" id="1474438at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="234"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="30727" checksum="32BAACFE874332B9" modified="2011-01-11" version="1">MKRLIHSEFERLWKRKWFWLMVLCTPVLAYSTGLYYLRTRNVPIEVLHQNFIVTSLQENLYLFCNSAVAALAAAVFTEEFQSGRLRLLFMRRFTRGQIFWSKLLVLNVSILLLLIIYALSSQVIVEVWKFSYDLSDIGLSGVRLLRILEYYGWAFASLLAISSLYCFFAMYSKSVTYAIGICMVYNLASLLFDPLYLKLASFVSHVPYLYDVVTFMIIPYLQHTGLNNSLIGSLSVNGAIITVVSVYLVLFTWGAYRRFVADDYLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC44</accession>
    <name>E3EC44_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Stage 0 sporulation protein J</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">parB7</name>
        <name evidence="4" type="ORF">PPSC2_25475</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373914.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12970"/>
    <dbReference type="EnsemblBacteria" id="ADO59384">
        <property type="protein sequence ID" value="ADO59384"/>
        <property type="gene ID" value="PPSC2_25475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5399"/>
    <dbReference type="eggNOG" id="COG1475">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023853_0_0_9"/>
    <dbReference type="OMA" id="IALSYQR"/>
    <dbReference type="OrthoDB" id="653368at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041468">
        <property type="entry name" value="HTH_ParB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004437">
        <property type="entry name" value="ParB/RepB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17762">
        <property type="entry name" value="HTH_ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00180">
        <property type="entry name" value="parB_part"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="3">
        <location>
            <begin position="25"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="32067" checksum="B9D85C4E52FA9DA6" modified="2011-01-11" version="1">MSKRLGKGLDALIPSLTVSEEDKVVDIPLSQLRANPYQPRKTFDEESIKELAESIRQHGVIQPIIARSVLRGYEIIAGERRFRASQFCGNPTIPVVVRNFTDQQVMEIALIENLQRENLNAMEVAVAYQGLMDQFSLTQEELSMKVGKSRSHIANFLRLLALPEEVKDHVSRGTLSMGHARAIVGLKDPDMVKQLALQCIEQQWSVRELEEAVQQLDHKPGETKAKAKVRKKDPYIDHMEESLRERFKTTVKIKHNKDKGKIELNYYSQQDLERLLELLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC56</accession>
    <name>E3EC56_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-350</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-350</name>
        <name evidence="1" type="ORF">PPSC2_01080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368842.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0212"/>
    <dbReference type="EnsemblBacteria" id="ADO54199">
        <property type="protein sequence ID" value="ADO54199"/>
        <property type="gene ID" value="PPSC2_01080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.204"/>
    <dbReference type="eggNOG" id="ENOG502ZCS5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_308785_0_0_9"/>
    <dbReference type="OrthoDB" id="134297at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="955" mass="112253" checksum="F47CA007E61BFC09" modified="2011-01-11" version="1">MLTLFTYSNQRPAESQVRDLIIKGRSYTYLTATMAIAIQREKDGLIPAEQVFQDDEGKDRKKALFADVLREWTKREYLLAPRGEAKTMLFRAMDEVSKDDISLRNLLRHDFMSWSRLLYDLAAQGIDLRIEELSKIKKDQLVNPKIEDYLKEIQKTFYDNLRRENKKIFEQAIREYLKNNQITTDIVIMEGFTFLTDLQKWFIEQCEKQGKEVFFLAPYNDNQKQAYQIIRNTYDFIWAGRSSIKTSELSTKEDIEYIQKKLFSDSETQIFPKQVENVSLRQFVNRDRELQGCLEQIEKWFSEGLYQPEEIVIVTRRAKEFNDRFQDYLSMNPLEFTDQDGNKHLVTLPINPRLLLLTPVGRFILNLYQLWHEEGFLLESNEFESIIASGWLGASIQDSTSLFRAAKNQYFTACKTKEEWIEKLEQLERYSEETDDVRLPTKLIDSETVRNWIKVVKMLESVCFRLFSNKKSPVAEHIEKLQEQLNEMLPEDIRKSEKEVLEKIREVFDELSNYYSIDLTTTEFGDALHAITRGESDNEDEEEQEKSNVTSHNLRIVIPETLDGMQFKAVIYVGCDNVHAPVLYPEPWPFYGDGRREHLYKERYMFLTVVKSVQENLVISYAQKDGDHSFQPSTYFQEIERILGANREKRALLDTLDVSKAPEDIKQSKARSAKRKEYSLSEIAHYGLCPLRYRLEMLHPEVRMYRNGWQLEIYAQGVWLNRIFSLIERNKEEKPYSLPTSQFLMKYMQSSKEGMLKLFPAFGSITWHSIENQVKNQILYFEDVTKHYFKGVKKGKKESFRVMLSGTNEERTVKINLDVPFIADRTKIQSPLINYLQTEEWLLPGSIKDEKGGNGTVEDIDIEGVSLFPTQKRAVDWWRDTINSYYMVEVEKKSGSNWYTNKLEKHYSGVREKIVHWINNIESSNFPKNTGDHCKSCPVRLECLGITVAKEDFTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECA5</accession>
    <name>E3ECA5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ydfP</name>
        <name evidence="6" type="ORF">PPSC2_01300</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368890.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14020"/>
    <dbReference type="EnsemblBacteria" id="ADO54248">
        <property type="protein sequence ID" value="ADO54248"/>
        <property type="gene ID" value="PPSC2_01300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.256"/>
    <dbReference type="eggNOG" id="COG2259">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058421_3_0_9"/>
    <dbReference type="OMA" id="NNGYEYA"/>
    <dbReference type="OrthoDB" id="2025630at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032808">
        <property type="entry name" value="DoxX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07681">
        <property type="entry name" value="DoxX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="132" mass="13460" checksum="8F62A2143C5CEA32" modified="2011-01-11" version="1">MLASGLLLIRLVVGLLFVGHGAQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVAAGLMELLGGALFTVGLLTPLAALLITMAMLGAIVKVHGQNGIWATANGYEYPLVLIAVVIGIALTGAGSYSIDAILH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECB8</accession>
    <name>E3ECB8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sodium:solute symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">melB</name>
        <name evidence="4" type="ORF">PPSC2_01370</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368903.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0276"/>
    <dbReference type="EnsemblBacteria" id="ADO54261">
        <property type="protein sequence ID" value="ADO54261"/>
        <property type="gene ID" value="PPSC2_01370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.271"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027408_0_2_9"/>
    <dbReference type="OMA" id="YWYYLGT"/>
    <dbReference type="OrthoDB" id="1249292at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001927">
        <property type="entry name" value="Na/Gal_symport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="PTHR11328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00792">
        <property type="entry name" value="gph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="43"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="121"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="167"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="193"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="242"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="279"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="305"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="330"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="371"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="415"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="456" mass="49912" checksum="FFC867DC5D666831" modified="2011-01-11" version="1">MSTRIVSTEPPEKAASTVPFHRKISYSLTDTAGNLLYCVISSYLLYFYTDVFGLSIGIAGTLLFITRFIDAIDAPIWGILIDRTKSKYGQSRPYFLWLAVPFAVFMVLTFTTPNWSESGKIAYAAITYIIAGILYTGISTPITSILPNLSTNSNERVVLNSFRMVGGNVGFFIATTFTLPLVAFFGQGNDQKGFSLTLVLFGIMAIIMFFIAFADLRENAAVKTKSVPIAKSFTAIKRNWPWMLVVAANLCYWIGLNIRSATLIFYLQYNLDSKDLVPLINGLTSLQLISMVLIPLFARKLSKNTIMIIGLILAALGQVVILMGSTNLTLIIAGWIIGALGSGFACSMPFAMLSDTVDYGEWKNGIRASGFLTSIGSAFCIKAGSGIGGLLPAWVMGSTGYIAGKVQTPTALSGIQFSFIWLPFIVFLIGIIPMFFYKKFEKNEASIQQDLIARRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECC9</accession>
    <name>E3ECC9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lactose ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araQ1</name>
        <name evidence="7" type="ORF">PPSC2_01425</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368914.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14140"/>
    <dbReference type="EnsemblBacteria" id="ADO54272">
        <property type="protein sequence ID" value="ADO54272"/>
        <property type="gene ID" value="PPSC2_01425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.282"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_1_9"/>
    <dbReference type="OMA" id="FRQSTKM"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="194"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="240"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="66"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="30473" checksum="7FB3493D358E45E1" modified="2011-01-11" version="1">MMKTKRAFTYAFLILVSFISIFPFLWMLSSSTNLSVDVTKGKLLPGSHLMDNMHNLLEQVDIVTALSNSAKVSISTTLLAMLIASLAGYGFEIYRSKAKDVVFNILLMSMMIPFAAIMIPLYRMFGSISNVIPWIGIDTLSSVVIPTVTTAFLIFFFRQSTKMFPKDLLEAGRMDGLSELGLFFRVYMPTMKTTYAAAAIITFMSSWNNYLWPLIVLQTPENQTIPLLISNLGSSYAPDYGVIMIAIVLSTLPTALVFFLMQKHFVAGMVGSVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECU5</accession>
    <name>E3ECU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yurM3</name>
        <name evidence="7" type="ORF">PPSC2_02110</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369029.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14875"/>
    <dbReference type="EnsemblBacteria" id="ADO54389">
        <property type="protein sequence ID" value="ADO54389"/>
        <property type="gene ID" value="PPSC2_02110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.398"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_2_9"/>
    <dbReference type="OMA" id="MIPMQAT"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="100"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="136"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="180"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="68"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="30832" checksum="6660F2C4429AE098" modified="2011-01-11" version="1">MNALKKTGVFSLLAVLVVTQLYPLFWLLTYSLKTNEEILSSSFFALPQVPQWHNYQEAYESGSYLRYLGNSVLVTGVTMMFVIVLSSMTAYAITRFRWRFGAVVLTLFLVGMMIPMQATLLPLMVMFKNVHILNTYFSLILPYIAFQTPIAVFILSGFMRSIPHEIEESAYIDGASIYRIFRSVILPISIPPIMTVCILTFINIWNEYIMAATFISSEKLKTLPFGVYTFVSQYSVNYGNIGAFLVMGALPVIIIYFALSEKITKGMVAGAVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECY1</accession>
    <name>E3ECY1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yecS</name>
        <name evidence="8" type="ORF">PPSC2_04285</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369484.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17095"/>
    <dbReference type="EnsemblBacteria" id="ADO54850">
        <property type="protein sequence ID" value="ADO54850"/>
        <property type="gene ID" value="PPSC2_04285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.854"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_1_4_9"/>
    <dbReference type="OMA" id="VAVIWYL"/>
    <dbReference type="OrthoDB" id="1523519at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="179"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="16"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="215" mass="23877" checksum="38AA445760AC44C8" modified="2011-01-11" version="1">MLELMWENVPFLLKGAYYTLYITIVSMLFGLIIGLIVAVARLKGNRPVRWLARMYVSIIRGTPVLVQIAVIYYGLDDYGISFGSLTAACLALSINTGAYLSETFRGAILAVPQGQTEAAYATGMSPGQTMWRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSELMRQAQLLQAQYLLYMPFLLEIALMYWIMSIGFSAILERVEKRLARAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECY2</accession>
    <name>E3ECY2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid ABC transporter ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnQ3</name>
        <name evidence="6" type="ORF">PPSC2_04290</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54851.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599487.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17100"/>
    <dbReference type="EnsemblBacteria" id="ADO54851">
        <property type="protein sequence ID" value="ADO54851"/>
        <property type="gene ID" value="PPSC2_04290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.855"/>
    <dbReference type="eggNOG" id="COG1126">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="DCTKEEF"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54851.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="27288" checksum="4D9DF0781BB37F1A" modified="2015-05-27" version="2">MITTNGLGKRFGQVEVLKSIDFQVAAREIVVLLGPSGSGKSTLLRCLNGLEELSSGKFEVNGIEVDATSPVRARQAAIRDIRKQTGMVFQQFNLYPHKTAIGNVIEGLLTVKKMPRDKAMSIGQQLLKRVGLLDKQDVHPSRLSGGQQQRVAIARALAMDPAIMLFDEPTSALDPELVGEVLGVMRELAQDGMTMVVVTHEMKFAREVADKVVFMADGIIVEEAAPQAFFDAPQHERTQKFLRQISEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED97</accession>
    <name>E3ED97_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ebh</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ebh</name>
        <name evidence="4" type="ORF">PPSC2_02410</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369094.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15175"/>
    <dbReference type="EnsemblBacteria" id="ADO54454">
        <property type="protein sequence ID" value="ADO54454"/>
        <property type="gene ID" value="PPSC2_02410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.464"/>
    <dbReference type="eggNOG" id="COG1404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_274276_0_0_9"/>
    <dbReference type="OMA" id="EMQTSIN"/>
    <dbReference type="OrthoDB" id="28675at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168800" evidence="2">
        <location>
            <begin position="39"/>
            <end position="1174"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="3">
        <location>
            <begin position="94"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="422"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1025"/>
            <end position="1174"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1025"/>
            <end position="1162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1174" mass="125405" checksum="C2CCE6B360B0BC58" modified="2011-01-11" version="1">MLKLVNRNKWIASAMVLGIASGSIVSLPWMGGAQTAYAATADTQSETGFVTQARTLGLMTGGNQGDFMAQKNLTRAEAAKILCSLFQLEVNNQPQTSFMDVSSDAWGAPYIEAVRAAGYMTGNGELFRPGDAITKEELIVSLVRAMDLQDAGTTDAQQNAVQVARNYGLLSEDASATDLKNPLNRESSAEVFVSLLDHPVGEVKSEGNTVRIGNIPYQLEGSLQGLFGENNKAVLKGAKIDLNRNLRTLTGVNKLEINADGGVFDGKGVSFDGRLIVNGSVTLKNMSSTGVLEIKGSGNQSVSAILENTTWSGVELGSKDAKLTATGTTKIDNLTLKNDASIMTEGNAAISRVSLQQGLGKLLVSGSIGLLDASQYVGVPFITLAKGAAINQLNLPEQKQPRDVIINYDAVKEAIGLVNGTKNSSSAGSVITDTDSKDKKKHDSDIISVDRSQLETEVHAAKELLERAGEGGTDQALYPAAAKESLSIAINQAMLVLNNTAATQAEVDQALSTLKQDVSVYTASVTEPVIGTQELTRLIQLASTILEQNRMVGDEFPPLWDDSLSQAIRFGNNVLEGNAPQNIVDREVESLGRVIKVYKASVKLRDVYLHFLDVTDRVENLKTDKARYKSIVREGSKVYLNPLSTTEQLDEWKQKIEGATESFLALQAADFSVLKNTLQEAQVIYDQSGSQNAELDNLIQEYTEKMHTAMTQQDVLNLNMELSQRLTEFTAPVPATTREKLQQLVQDIQLKLLSDPVARNYLNTEMQLLDQQTVQAHFALIMPFTPEEQLVISYNQLSQAKGTYIEKYNEKRLQLRDKVIEMQTSINGILLQNSGTLSAEAQQALSSASEHASTFLGLSSFELQDVVPVYEELQQVQNQYTAPIAVDTMLLNLNINLANNEVQTFGRHYTDQDNEELQGQINLANLVLNNPNSTQLQVDQANTDLITAFANYQSKWIVTDLDINELKNIANNLLTVNGTDPTTVYFHRVVDAFNRLDQYLPMPELKKNYMNLEDAIQEYKDFIDSQQQSSGTGSGDSSGGTTPLSDSDGTGSGDSSGGATSPSDSDGTGTGDSSGGTTPPSDSDGTGSSDSSGGTTPPSDSNGTGSGDSSGGATSPSDNSGTGSGDISGGATPPSDNSGTGSSDSSGEATPPSVSSGDDSGSIPGGSIDDVIIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDK1</accession>
    <name>E3EDK1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Potassium-transporting ATPase ATP-binding subunit</fullName>
            <ecNumber evidence="12">7.2.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">ATP phosphohydrolase [potassium-transporting] B chain</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Potassium-binding and translocating subunit B</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Potassium-translocating ATPase B chain</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 13" type="primary">kdpB</name>
        <name evidence="13" type="ORF">PPSC2_06410</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system and for the release of the potassium ions to the cytoplasm.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>ATP + H2O + K(+)(out) = ADP + H(+) + K(+)(in) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:16777"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="7.2.2.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="12">The system is composed of three essential subunits: KdpA, KdpB and KdpC.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
            <topology evidence="12">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.</text>
    </comment>
    <dbReference type="EC" id="7.2.2.6" evidence="12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55309.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599551.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19355"/>
    <dbReference type="EnsemblBacteria" id="ADO55309">
        <property type="protein sequence ID" value="ADO55309"/>
        <property type="gene ID" value="PPSC2_06410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1320"/>
    <dbReference type="eggNOG" id="COG2216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025728_2_0_9"/>
    <dbReference type="OrthoDB" id="237367at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008556">
        <property type="term" value="F:P-type potassium transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02078">
        <property type="entry name" value="P-type_ATPase_K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00285">
        <property type="entry name" value="KdpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006391">
        <property type="entry name" value="P-type_ATPase_bsu_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43743">
        <property type="entry name" value="PTHR43743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01497">
        <property type="entry name" value="kdpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10 12" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 12" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7 12" id="KW-0630">Potassium</keyword>
    <keyword evidence="3 12" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-1278">Translocase</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="250"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="583"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="610"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="650"/>
            <end position="675"/>
        </location>
    </feature>
    <feature type="active site" description="4-aspartylphosphate intermediate" evidence="12">
        <location>
            <position position="303"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="340"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="344"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="372"/>
            <end position="379"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="391"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="514"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="518"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO55309.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="676" mass="72546" checksum="03049E58A6F5B0A6" modified="2015-05-27" version="2">MKEERKRMLDRSILKQAIKDSFIKLNPMIMMKNPVMFVVEIGTLVVLLMLLLPGYFGVGKEMGFNLAVFIILLFTLLFANFAEALAEGRGKAQAASLKKSKQDSQANKLVGNEIQVVSSTALRKGDVVIVSQGEMIPSDGEVIEGLASVDESAITGESAPVIKESGGDFCSVTGGTRVVSDRIKVRITTEPGETFIDKMISLVEGAQRQKTPNEIALNTLLISLTIIFLIVVVTLAPIARHFKIDLPVPVLISLLVCLIPTTIGGLLSAIGIAGMDRVTQFNVLAMSGKAVEASGDINTMILDKTGTITFGNRMASEFVVVDGVEKAELAKWAAMSSLKDETPEGRSVLELMRKQEYTLDESLAAGGTFIEFKAETRMSGLDLADGRRVRKGAVDSVRQWIVSQKGSVPADLEEKANQVAAEGGTPLAVALDDRIYGIIYLKDTVKPGMKERFDQLREMGIRTIMCTGDNPLTAATIAREAGVDDFVAESKPEDKIAVIRREQEQGKLVAMTGDGTNDAPALAQADVGLAMNSGTVAAKEAANMVDLDSDPSKIIEVVAIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFMLAIPQMSALNVMGLGSPLSAILSALIFNAVIIPLLIPLAMKGVKYKPMSSDRLLGRNLLIYGLGGMVVPFVGIKAIDLLVHLWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDL2</accession>
    <name>E3EDL2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369951.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19420"/>
    <dbReference type="EnsemblBacteria" id="ADO55320">
        <property type="protein sequence ID" value="ADO55320"/>
        <property type="gene ID" value="PPSC2_06455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1330"/>
    <dbReference type="eggNOG" id="ENOG503350E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1141698_0_0_9"/>
    <dbReference type="OMA" id="WDIAPLE"/>
    <dbReference type="OrthoDB" id="2051537at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="29551" checksum="570ABF9DD3E344E2" modified="2011-01-11" version="1">MDPTGYSPNWNKRRQIQLRKILLIFMLVCCLFALTSCARGDIHVDVHLDQSVDMDATFSVNNQTLMMLDNPGLLDRLVQRMQSNNVDVQPLSEQGRKGYQIKGHYQGDWGTNQKNPDQGLNLPEGLEINRAVSQHFFTTNMDLTLKLDLPRMLPEEARGLSDKLEQMNVFARKLLERQLDLNFSLSLPIQPASSNADRVSDDGKTLYWDIAPLESNELKLSVNVPNVRHIVYVSATGLILIAVAVILRIRNYRRKNKHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDP8</accession>
    <name>E3EDP8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Cobalamin biosynthesis protein CobD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cobD</name>
        <name evidence="11" type="synonym">cbiB</name>
        <name evidence="11" type="ORF">PPSC2_06625</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cell membrane</location>
            <topology evidence="2 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the CobD/CbiB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369987.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19590"/>
    <dbReference type="EnsemblBacteria" id="ADO55356">
        <property type="protein sequence ID" value="ADO55356"/>
        <property type="gene ID" value="PPSC2_06625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1364"/>
    <dbReference type="eggNOG" id="COG1270">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054212_0_0_9"/>
    <dbReference type="OMA" id="WGYRNER"/>
    <dbReference type="OrthoDB" id="2029688at2"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015420">
        <property type="term" value="F:ABC-type vitamin B12 transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048472">
        <property type="term" value="F:threonine-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00024">
        <property type="entry name" value="CobD_CbiB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004485">
        <property type="entry name" value="Cobalamin_biosynth_CobD/CbiB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34308">
        <property type="entry name" value="PTHR34308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03186">
        <property type="entry name" value="CobD_Cbib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00380">
        <property type="entry name" value="cobD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 10" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="80"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="161"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="205"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="297"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="35408" checksum="8B54F4D9E432D8EB" modified="2011-01-11" version="1">MIVSLVIMAAYLLDRLIGDPRWLPHPVIGMGHAISALEKAIRRKVRSDRGLKRAGILLPFIVAGGSFVLAWGLLRVLAWIHPWLSVVVEIVLIATTIASKGLKDAGMAVYRALQANDLTGARRELGMIVGRDTQQLDEPEIVRGTVETVAENIVDAIISPLFYALIGGAPLALAYRAVNTLDSMVGYKNEKYLHLGWASARLDDVANYIPARMTAVMLVIASWLYRLDAARSWRTIKRDARLHPSPNSGFPESAVAGALGIRLGGYNVYHGIRSFRAYMGEGIRPLESKDIRHTIRLMFAVSTMFVGLCLMGAAGCFALGWMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS2</accession>
    <name>E3EDS2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Malate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">me</name>
        <name evidence="6" type="ORF">PPSC2_06740</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="3">Divalent metal cations. Prefers magnesium or manganese.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the malic enzymes family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370011.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19705"/>
    <dbReference type="EnsemblBacteria" id="ADO55380">
        <property type="protein sequence ID" value="ADO55380"/>
        <property type="gene ID" value="PPSC2_06740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1387"/>
    <dbReference type="eggNOG" id="COG0281">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_034446_2_1_9"/>
    <dbReference type="OMA" id="NMIMCDS"/>
    <dbReference type="OrthoDB" id="654531at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004471">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008948">
        <property type="term" value="F:oxaloacetate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd05311">
        <property type="entry name" value="NAD_bind_2_malic_enz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012301">
        <property type="entry name" value="Malic_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037062">
        <property type="entry name" value="Malic_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012302">
        <property type="entry name" value="Malic_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045213">
        <property type="entry name" value="Malic_NAD-bd_bact_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001891">
        <property type="entry name" value="Malic_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00390">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03949">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000106">
        <property type="entry name" value="ME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01274">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00919">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="malic" evidence="5">
        <location>
            <begin position="92"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="Malic_M" evidence="4">
        <location>
            <begin position="237"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="210"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000106-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000106-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="51328" checksum="F64C2E3EE9D90104" modified="2011-01-11" version="1">MQGGIGGKNIILRLEISTEHIQFGQLITLVNEHGGDVIAIDVIRTSEKATVRDITVTIADPAEIDRMIARIKKAQGVKVLSISDRTFLLHLGGKIEMQPKVPIQNRDDLSRVYTPDVARVCMAIHEEQDKAFRLTIKRNTVAVVSDGSAVLGLGNIGPYAAMPVMEGKAMLFKQLGSVDAFPICLDTQDTEEIIKAIKQLAPAFGGINLEDISSPRCFEIEQRLRDELDIPVFHDDQHGTAVVLYAGLINALKVVGKALSDVKIVVCGIGAAGVACTKILLSAGAVNIIGVDRNGALTADETYEHPMWNWYAQHTNPERLSGTLSEVLKDADVFIGLSAGGILQREDVKRMKEAPVLFTMANPVPEINPEDVEDIAGVIATGRSDYPNQINNVLCFPGIFRAALDCRAREINEEMKLAAAEAIASTIRPDELNKLYIIPGVFNEGAVQQVRKKVIQAAIASGTARRVPRDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS6</accession>
    <name>E3EDS6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9 10">DNA replication and repair protein RecF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">recF</name>
        <name evidence="12" type="ORF">PPSC2_00020</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10">The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9 10">Belongs to the RecF family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368647.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13035"/>
    <dbReference type="EnsemblBacteria" id="ADO53992">
        <property type="protein sequence ID" value="ADO53992"/>
        <property type="gene ID" value="PPSC2_00020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4"/>
    <dbReference type="eggNOG" id="COG1195">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040267_0_1_9"/>
    <dbReference type="OMA" id="GESWSYA"/>
    <dbReference type="OrthoDB" id="891841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1050.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00365">
        <property type="entry name" value="RecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001238">
        <property type="entry name" value="DNA-binding_RecF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018078">
        <property type="entry name" value="DNA-binding_RecF_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042174">
        <property type="entry name" value="RecF_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32182:SF0">
        <property type="entry name" value="PTHR32182:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00611">
        <property type="entry name" value="recf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00617">
        <property type="entry name" value="RECF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00618">
        <property type="entry name" value="RECF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9 10" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7 9 10" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9 10" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9 10" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="SMC_N" evidence="11">
        <location>
            <begin position="3"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="30"/>
            <end position="37"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO53992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="371" mass="42239" checksum="91831DAEE226C0EF" modified="2011-01-11" version="1">MFVNNIVLQQYRNYEQLELNEFGPVNLLIGQNAQGKTNLVEAIFVLALTKSHRTSRDKELISFGATSTHLAADVDKKYGKIRLDLSLSTQGKKAKINGLEQRKLSDFIGSLNVVMFAPEDLEIVKGTPGVRRRFLDMEIGQVAPGYLYHLQQYQKVLVQRNNLLKQAWGKDMASVQLMLEVWNEQLVEHGVKIVKKRKQFITKLQKWAQAIHEGIAGGTEELKLTYVPSFGEPEEEDEAVLLERFMIKLSQMREQEIRRGMTLAGPHRDDLAFAINGREVHTYGSQGQQRTTALSLKLAEIELIHEEIGEYPILLLDDVLSELDPYRQTQLIETFQSKVQTFITATGIETLNAERLKGAHIYHVHDGHVEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDT4</accession>
    <name>E3EDT4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_00070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368654.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13085"/>
    <dbReference type="EnsemblBacteria" id="ADO54000">
        <property type="protein sequence ID" value="ADO54000"/>
        <property type="gene ID" value="PPSC2_00070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.12"/>
    <dbReference type="eggNOG" id="ENOG5032TFZ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1531062_0_0_9"/>
    <dbReference type="OMA" id="IHTLWIG"/>
    <dbReference type="OrthoDB" id="1948054at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="20878" checksum="88898266A50F1B4D" modified="2011-01-11" version="1">MTEETGTKATYYHYKLIKKINIPRQLIWSHLTLPVIMLLFLLLAFSWTSVFLFALAFFLTLWVHFVISRSVLYIGGGTAFRKRWAFQRRLPWLGYMTDQYIGYRIFRRVHIHTLWIGICLSAVFILWSPPAFTVSLLFWHLWLIAPRLYVLSRLTGERKDGMLKFTDEEASYYQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDU5</accession>
    <name>E3EDU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-171</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-171</name>
        <name evidence="2" type="ORF">PPSC2_00115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368664.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13130"/>
    <dbReference type="EnsemblBacteria" id="ADO54011">
        <property type="protein sequence ID" value="ADO54011"/>
        <property type="gene ID" value="PPSC2_00115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.22"/>
    <dbReference type="eggNOG" id="COG4123">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061983_3_0_9"/>
    <dbReference type="OMA" id="GLLCARD"/>
    <dbReference type="OrthoDB" id="1027015at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007848">
        <property type="entry name" value="Small_mtfrase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05175">
        <property type="entry name" value="MTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MTS" evidence="1">
        <location>
            <begin position="34"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="28492" checksum="B3760E63F6708907" modified="2011-01-11" version="1">MYENEKKSERIDDLLSHNLRIIQSDEVFSFSMDAVLLARFAGIPLQRGKILDLCTGNGVVPILLTTRTKASIEGIEIQPRLADMARRSVSLNGLEDAIEIREGDLRELVQITGHGAYDAITVNPPYMPLNGSDIKLNPHQAIARHEVNCTLEEVIQACTRLVRNGGKVSMVHRPQRLAEIISLMRSYSLEPKRIRFVHPRIHMEANMVLVEAMRDGKPEVRLLPPLIVYQEDGNYTQEIREIYGEVSKEDSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEF3</accession>
    <name>E3EEF3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Enterobactin esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">eSD</name>
        <name evidence="1" type="ORF">PPSC2_06850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370035.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19820"/>
    <dbReference type="EnsemblBacteria" id="ADO55404">
        <property type="protein sequence ID" value="ADO55404"/>
        <property type="gene ID" value="PPSC2_06850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1411"/>
    <dbReference type="eggNOG" id="COG2819">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039834_3_0_9"/>
    <dbReference type="OMA" id="KPWVEAN"/>
    <dbReference type="OrthoDB" id="1828423at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000801">
        <property type="entry name" value="Esterase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00756">
        <property type="entry name" value="Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="256" mass="28420" checksum="68B2AB98B9F299CA" modified="2011-01-11" version="1">MHSQAENREYHIYIAIPAEEPPVSGYPIIYVLDANSVFGTMVEAVRVQGRRPEKTGVVPAIIVGIGYPTEAPFHPSRYYDLTLPGTAVELPIKPNEDAAIESGGAEHFLSFIEDELKPMIERDFPIDRSRQTIFGHSLGGLFVLHTLFTRPDSFQVYVAGSPSIHWGGQAIKDEEKQFVASIAQKHWTKKLLIAVGELEAGHFSGMQEKARDLAARLTTRDNLGLHVEYREFADEGHISVLPVLVSRAVRFASDSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEQ8</accession>
    <name>E3EEQ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lytic transglycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">slt</name>
        <name evidence="2" type="ORF">PPSC2_08370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370365.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20975"/>
    <dbReference type="CAZy" id="GH23">
        <property type="family name" value="Glycoside Hydrolase Family 23"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55745">
        <property type="protein sequence ID" value="ADO55745"/>
        <property type="gene ID" value="PPSC2_08370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1759"/>
    <dbReference type="eggNOG" id="COG0741">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065765_7_0_9"/>
    <dbReference type="OMA" id="YLICAII"/>
    <dbReference type="OrthoDB" id="1444566at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT" evidence="1">
        <location>
            <begin position="40"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="22051" checksum="DAEBE094CC86294A" modified="2011-01-11" version="1">MNILRKKRVLLILFVGFVLILFLNSNWMSWFYPIQYKDEIRQYSQTYEVDPFLVASIIRVETNFKTSKQSHKGALGLMQIMPNTANWIMDSAQIQKVPLDSVKHEPGTNIELGTWYLHNLSMKFQDNPVVIVAAYNAGPGKVKEWLDQGVWDGKEESIKQIPFGETRHYVQRVIYYYRQYTKIYNEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF82</accession>
    <name>E3EF82_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">Methionine aminopeptidase</fullName>
            <shortName evidence="2">MAP</shortName>
            <shortName evidence="2">MetAP</shortName>
            <ecNumber evidence="2 3">3.4.11.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Peptidase M</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">map</name>
        <name evidence="5" type="synonym">map3</name>
        <name evidence="5" type="ORF">PPSC2_03175</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 2">Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>Release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.</text>
            <dbReference type="EC" id="3.4.11.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="2 3">Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.18" evidence="2 3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54602.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040103793.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15985"/>
    <dbReference type="EnsemblBacteria" id="ADO54602">
        <property type="protein sequence ID" value="ADO54602"/>
        <property type="gene ID" value="PPSC2_03175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.608"/>
    <dbReference type="eggNOG" id="COG0024">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015857_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070084">
        <property type="term" value="P:protein initiator methionine removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01086">
        <property type="entry name" value="MetAP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01974">
        <property type="entry name" value="MetAP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001714">
        <property type="entry name" value="Pept_M24_MAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002467">
        <property type="entry name" value="Pept_M24A_MAP1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00599">
        <property type="entry name" value="MAPEPTIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00500">
        <property type="entry name" value="met_pdase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="4">
        <location>
            <begin position="14"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54602.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27335" checksum="47E588FB68161FB5" modified="2015-05-27" version="2">MEIAIRTPEEIGYMREAGRILADCHRTLESRILPGITTLEIDAWVEQFLSKRGATPEQKGYKGFPYATCASVNEVVCHGFPSERVLHDGDIVTIDIVVNKDGWLADRGWTYAVGNISRPVAKLLRQTHKALMRGIDVARPGRTLGDIGHAVGKAAGWRRYGNVKSLIGHGIGRQMHEPPDVLHYGRARTGLPLREGMVITIEPVFTLGPEGAVLWGDDGWTISTADGSWGAQYEHTIAITKNGPYILTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFB2</accession>
    <name>E3EFB2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Magnesium transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mgtC1</name>
        <name evidence="9" type="ORF">PPSC2_05330</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MgtC/SapB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369708.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18245"/>
    <dbReference type="EnsemblBacteria" id="ADO55075">
        <property type="protein sequence ID" value="ADO55075"/>
        <property type="gene ID" value="PPSC2_05330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1080"/>
    <dbReference type="eggNOG" id="COG1285">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079292_0_1_9"/>
    <dbReference type="OMA" id="KMTLHVE"/>
    <dbReference type="OrthoDB" id="2022224at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003416">
        <property type="entry name" value="MgtC/SapB/SrpB/YhiD_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33778">
        <property type="entry name" value="PTHR33778"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13291">
        <property type="entry name" value="ACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02308">
        <property type="entry name" value="MgtC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01837">
        <property type="entry name" value="MGTCSAPBPROT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="100"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="8">
        <location>
            <begin position="148"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="223" mass="24520" checksum="BD2B7667CA96BE2A" modified="2011-01-11" version="1">MWDWDYLIRVMFAGLCGALIGYERKSRMKEAGIRTHFIVGIGASLMMVVSKYGFQDQTVWSNLSLDPSRIAAQVISGVGFIGAGMIFTQKNRIKGLTTAAGIWTTAGIGIAVGAGMYGLGAGVTLFILAAQSLLHSRFYQMATPSTRQVVVQVENEPGVLNQIKELLENRKLTIHSFHAERINNGEQLMVHMLLKLSRSEGVEELLSLLQEMEGIRSVETKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFE9</accession>
    <name>E3EFE9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YddR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yddR</name>
        <name evidence="2" type="ORF">PPSC2_05495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369745.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18405"/>
    <dbReference type="EnsemblBacteria" id="ADO55112">
        <property type="protein sequence ID" value="ADO55112"/>
        <property type="gene ID" value="PPSC2_05495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1116"/>
    <dbReference type="eggNOG" id="COG2220">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096448_0_0_9"/>
    <dbReference type="OMA" id="RFLIDPM"/>
    <dbReference type="OrthoDB" id="767622at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="20"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="250" mass="27205" checksum="517157D694688542" modified="2011-01-11" version="1">MKITLIRNATLWIEYAGVKFLIDPMLSDAGLNPPVPNTENTFRNPLVPLPPQWQTLGQPDVVIVTHLHPDHWDPAAVRWLDKQIPVFCQPGNEEQIMADGFTQVTPISVAGSVGKIEITRTTGHHGTGEIGEQMGAVSGFVFQAPGEPVVYVAGDTIWCSEVAEALDKFRPDWTIVNAGGARFTVGDPIIMTAQDVTAVAQHAPYTQVVAVHMEAINHCVLTRSELTEHINREGLEKRVHIPADGATISA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFL2</accession>
    <name>E3EFL2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">lisK</name>
        <name evidence="12" type="ORF">PPSC2_07310</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370130.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20290"/>
    <dbReference type="EnsemblBacteria" id="ADO55503">
        <property type="protein sequence ID" value="ADO55503"/>
        <property type="gene ID" value="PPSC2_07310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1509"/>
    <dbReference type="eggNOG" id="COG5002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_6_9"/>
    <dbReference type="OMA" id="AKWIIDE"/>
    <dbReference type="OrthoDB" id="692375at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="7"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="191"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="260"/>
            <end position="487"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="492" mass="55041" checksum="B3B33FFB87838875" modified="2011-01-11" version="1">MSIRWRLTAWYSSILAIVLVIFGLAIYGLVYYYTYNEVKSQLMTQAPQINKQLRLIIKGGLFEVPNLDLGLEQGRGIDDSQLYVQIYNYTSGVTKTTQNMKDLSITFPVPSTAAGAVQNEGVRRVNVNGDSFMIYQQSIKSEELGLVVGLLQVGQFTGSQDRLMNRLQNVLVYGSLFALLAAATSGLFLARKSMKPLVKVIEGANQIQSSNDLSVRIEYDGPPDEIGQLIGTVNNMLGRTEVFYKELEDAYGAQRRFVADASHELRTPLTTIRGNVDFLLKMWTTEPGERPNMDEAMIRELSMEALNDMADEGKRMSRLVSDMLSLARADTGKTFDKMPVALEPLVNEVARRAQFLERTAEWNVGDFSLLNGIYMDGSKDYLQQMLFIFIDNAFKYTPEGTVRFDAIVYQGQVGLRISDTGIGMDKSEVPFIFDRFYRADESRGVTEGIGLGLSIAKWIIDEHQGSVEVVTRQGEGTTFVIWLPVSFSAPLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFL3</accession>
    <name>E3EFL3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">4-hydroxy-3-methylbut-2-enyl diphosphate reductase</fullName>
            <shortName evidence="5">HMBPP reductase</shortName>
            <ecNumber evidence="5">1.17.7.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ispH</name>
        <name evidence="6" type="synonym">lytB</name>
        <name evidence="6" type="ORF">PPSC2_07315</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>H2O + isopentenyl diphosphate + 2 oxidized [2Fe-2S]-[ferredoxin] = (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H(+) + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:24488"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:128753"/>
            <dbReference type="ChEBI" id="CHEBI:128769"/>
            <dbReference type="EC" id="1.17.7.4"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>dimethylallyl diphosphate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin] = (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H(+) + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:24825"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57623"/>
            <dbReference type="ChEBI" id="CHEBI:128753"/>
            <dbReference type="EC" id="1.17.7.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Isoprenoid biosynthesis; dimethylallyl diphosphate biosynthesis; dimethylallyl diphosphate from (2E)-4-hydroxy-3-methylbutenyl diphosphate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 6/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the IspH family.</text>
    </comment>
    <dbReference type="EC" id="1.17.7.4" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55504.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599573.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20295"/>
    <dbReference type="EnsemblBacteria" id="ADO55504">
        <property type="protein sequence ID" value="ADO55504"/>
        <property type="gene ID" value="PPSC2_07315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1510"/>
    <dbReference type="eggNOG" id="COG0761">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027486_0_0_9"/>
    <dbReference type="OrthoDB" id="1311145at2"/>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00097"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00059">
        <property type="reaction ID" value="UER00105"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051745">
        <property type="term" value="F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050992">
        <property type="term" value="P:dimethylallyl diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13944">
        <property type="entry name" value="lytB_ispH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00191">
        <property type="entry name" value="IspH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003451">
        <property type="entry name" value="LytB/IspH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30426">
        <property type="entry name" value="PTHR30426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02401">
        <property type="entry name" value="LYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00216">
        <property type="entry name" value="ispH_lytB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 5" id="KW-0408">Iron</keyword>
    <keyword evidence="4 5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="226"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="170"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="271"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55504.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="35358" checksum="8BA5B666B3D84A50" modified="2015-05-27" version="2">MEVLRISPRGYCYGVVDAMVLARQAARNLDLPRPIYILGMIVHNSHVTNSFEDEGIITLDGPNRMEILSQVESGTVIFTAHGVSPEVRKLARDKGLTTVDATCPDVTKTHDLIREKSAEGYQIVYIGKKNHPEPEGAIGIAPDHVHLIEKEEEIDGLTLSADKILITNQTTMSQWDIKHIMKKLLEKYPGAEIHNEICLATQVRQEAVAEQAGQADLVIVVGDPRSNNSNRLAQVSEEIAGTTAYRISDITELKREWLEGVAKVAVTSGASTPTLITKEVITYLEQYDADNPETWEIRRTIDMKKLLPPVREKSKTTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFT8</accession>
    <name>E3EFT8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">E9imm peptide</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yezA</name>
        <name evidence="3" type="ORF">PPSC2_08680</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the colicins ColE2/ColE8/ColE9 and pyocins S1/S2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370429.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1838"/>
    <dbReference type="EnsemblBacteria" id="ADO55810">
        <property type="protein sequence ID" value="ADO55810"/>
        <property type="gene ID" value="PPSC2_08680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1828"/>
    <dbReference type="eggNOG" id="ENOG502ZXUG">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_174792_1_1_9"/>
    <dbReference type="OMA" id="ISNLIYW"/>
    <dbReference type="OrthoDB" id="2041240at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015643">
        <property type="term" value="F:toxic substance binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030153">
        <property type="term" value="P:bacteriocin immunity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16363">
        <property type="entry name" value="Col_Im_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035900">
        <property type="entry name" value="Colicin_E_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000290">
        <property type="entry name" value="Colicin_pyocin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01320">
        <property type="entry name" value="Colicin_Pyocin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47345">
        <property type="entry name" value="SSF47345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0079">Bacteriocin immunity</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9743" checksum="468825CB8B99AB79" modified="2011-01-11" version="1">MSLDRNPLKLQKLNRSELIQLVDKIIRGEGTEEELDSMLTEVMQNTPHPGISNLIYWDDRDLSAAEIVDEALAYQPIILPPHESSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG30</accession>
    <name>E3EG30_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ATP synthase</fullName>
            <ecNumber evidence="8">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fliI</name>
        <name evidence="8" type="ORF">PPSC2_09870</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370676.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22340"/>
    <dbReference type="EnsemblBacteria" id="ADO56063">
        <property type="protein sequence ID" value="ADO56063"/>
        <property type="gene ID" value="PPSC2_09870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2080"/>
    <dbReference type="eggNOG" id="COG1157">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022398_5_1_9"/>
    <dbReference type="OMA" id="MLMMDSV"/>
    <dbReference type="OrthoDB" id="875807at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030257">
        <property type="term" value="C:type III protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030254">
        <property type="term" value="P:protein secretion by the type III secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020003">
        <property type="entry name" value="ATPase_a/bsu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005714">
        <property type="entry name" value="ATPase_T3SS_FliI/YscN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022425">
        <property type="entry name" value="FliI_clade2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040627">
        <property type="entry name" value="T3SS_ATPase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18269">
        <property type="entry name" value="T3SS_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03497">
        <property type="entry name" value="FliI_clade2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01026">
        <property type="entry name" value="fliI_yscN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00152">
        <property type="entry name" value="ATPASE_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-1278">Translocase</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AAA" evidence="7">
        <location>
            <begin position="159"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="439" mass="47741" checksum="1419E4DF818D355E" modified="2011-01-11" version="1">MKGLNAQRYMDHLRQLDPVRVNGKVTQVIGLMVESEGPDASIGDVCYIYPGKAAKPLQAEVVGFRDNKVLLMPLGELQSIGPGCDVVGTGKPLNVQVGSELLGKVLDGLGQPLDGSLIPSRMARYSTFNIPSNPLNRPRVQEPISIGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMIARNTEADVNVIALIGERGREVLDFIERDLGPEGLERSVVIVATSDQPALIRIKGALIATTIAEYFRDRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPTGSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANKGHFPAIDVLASISRVMKDIATRDQIDAAENIKRLMAIYKDSEDLINIGAYQQGSNAEIDESMERIRDIWDFTRQRTDEKAELDEVRERLISEFTRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG60</accession>
    <name>E3EG60_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 9">Alpha-acetolactate decarboxylase</fullName>
            <ecNumber evidence="4 9">4.1.1.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">alsD</name>
        <name evidence="10" type="ORF">PPSC2_10715</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>(2S)-2-acetolactate + H(+) = (R)-acetoin + CO2</text>
            <dbReference type="Rhea" id="RHEA:21580"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15686"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="4.1.1.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Polyol metabolism; (R,R)-butane-2,3-diol biosynthesis; (R,R)-butane-2,3-diol from pyruvate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the alpha-acetolactate decarboxylase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.5" evidence="4 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370859.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23110"/>
    <dbReference type="EnsemblBacteria" id="ADO56253">
        <property type="protein sequence ID" value="ADO56253"/>
        <property type="gene ID" value="PPSC2_10715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2269"/>
    <dbReference type="eggNOG" id="COG3527">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072561_0_0_9"/>
    <dbReference type="OMA" id="YKPMLEA"/>
    <dbReference type="OrthoDB" id="1445885at2"/>
    <dbReference type="UniPathway" id="UPA00626">
        <property type="reaction ID" value="UER00678"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047605">
        <property type="term" value="F:acetolactate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045151">
        <property type="term" value="P:acetoin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd17299">
        <property type="entry name" value="acetolactate_decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005128">
        <property type="entry name" value="Acetolactate_a_deCO2ase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35524">
        <property type="entry name" value="PTHR35524"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03306">
        <property type="entry name" value="AAL_decarboxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001332">
        <property type="entry name" value="Acetolac_decarb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01252">
        <property type="entry name" value="acetolac_decarb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0005">Acetoin biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR001332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="28138" checksum="BD86A6069032FB5A" modified="2011-01-11" version="1">MTVAELETKQETDHDIYQTSTMLALLDGLYDGVVAFEELQKHGDFGLGTFDQLNGEMIAFDGEFYHLLPDGTAHRVKPEETTPFSTVTFFREDFTYTVDHPMHREELEALLLKLFPSRNLFYAFRMDGTFREVKTRTVPHQVKPYKPFIEATKSQPTFTFNDASGVITGFWTPAYAQGIGVAGFHLHFINDERTGGGHVFDFVVDKCTIRICQKSNLHLVLPDTPDYLTANLSRENLEKEIAVTEGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG95</accession>
    <name>E3EG95_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cobalamin biosynthesis protein CobW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjiA</name>
        <name evidence="3" type="ORF">PPSC2_12275</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. CobW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371189.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2615"/>
    <dbReference type="EnsemblBacteria" id="ADO56585">
        <property type="protein sequence ID" value="ADO56585"/>
        <property type="gene ID" value="PPSC2_12275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2601"/>
    <dbReference type="eggNOG" id="COG0523">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017452_0_2_9"/>
    <dbReference type="OMA" id="MWGVLRY"/>
    <dbReference type="OrthoDB" id="1267701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036627">
        <property type="entry name" value="CobW-likC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00833">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobW C-terminal" evidence="2">
        <location>
            <begin position="236"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="336" mass="38236" checksum="5849ECE8760708BB" modified="2011-01-11" version="1">METEQDPRIPVTIITGFLGAGKTTLLNHILKADHGYKIAVIVNEFGEVGIDNELIVESGEEIIEMNNGCICCTVRSDLVDIMKSLLHRKFAETLTPVEYDRIVVETTGLADPGPVIQTFLAEPLISNFFKIDAVITVVDAKHAEHHLDNGHEAKEQVAFADFILLNKIDLVEKEDIARLESRLKKMNSHARLTHTHQSLIDLDQIFGVNTFDLDHKLEVDPHLLEEHHHHHHDDDIFSIILTETRPLDLDKVNKFINDWLVEHSADTYRYKGILNVQKTNKRVVFQGVHMIFGVDTDREWNVDEDRTSRIVVIGKDLDEDWFRARFSECAVADGGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGI1</accession>
    <name>E3EGI1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rhaS9</name>
        <name evidence="2" type="ORF">PPSC2_03255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369257.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0637"/>
    <dbReference type="EnsemblBacteria" id="ADO54620">
        <property type="protein sequence ID" value="ADO54620"/>
        <property type="gene ID" value="PPSC2_03255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.628"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_2_9"/>
    <dbReference type="OMA" id="VHRIDFH"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="197"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="34835" checksum="2651A5F4EB198E7B" modified="2011-01-11" version="1">MVRISKQKRNIERLKYQPVLPYPYDVEIFRVSDLKQRTPKERMSVTYRYEFYMLICVTQGECIQWVDFEPISCSTGTFLAISPGQVHNFGHDENWDGWIILFRSEFLIPNTSTLNELKLAFDFGRLPSILNLNHNELRRSIASIEQMIEDLLIEGTEEDIHMLLRYQLYAFVTWLSILHKCKRMNETIDSQTSLRFISFQKLVEKYFAKLSHVSEYATRLNCTEKTLTRATMAAVGISAKAFISARINLEAKRLLMHTDYSISDIAEKLNFKEATHFSKFFKRETGCTPAEFRQQHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGQ3</accession>
    <name>E3EGQ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">arpU1</name>
        <name evidence="1" type="ORF">PPSC2_05620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369770.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18525"/>
    <dbReference type="EnsemblBacteria" id="ADO55137">
        <property type="protein sequence ID" value="ADO55137"/>
        <property type="gene ID" value="PPSC2_05620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1143"/>
    <dbReference type="eggNOG" id="ENOG5032W2M">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_107917_1_0_9"/>
    <dbReference type="OMA" id="KYRIYKT"/>
    <dbReference type="OrthoDB" id="1723150at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006524">
        <property type="entry name" value="ArpU-like"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01637">
        <property type="entry name" value="phage_arpU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18573" checksum="B8EB7841E6A09A0F" modified="2011-01-11" version="1">MRNNLPELDRRKTQNALEGVFEKYRIYKTITFMDRESFITAGYTDRPNGPTNVTSDPTARTAVYNVDAPAARLAYCQMVDAVVSRLNEREQLLIRERYLKDDDVFDYKVYNYVLDPPVSKDTYTKLRTRAFYKMALALADQGVLNLASLQKGADRRLGSVNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHA8</accession>
    <name>E3EHA8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">glgA1</name>
        <name evidence="3" type="ORF">PPSC2_09095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370516.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21565"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55899">
        <property type="protein sequence ID" value="ADO55899"/>
        <property type="gene ID" value="PPSC2_09095"/>
    </dbReference>
    <dbReference type="GeneID" id="66578119"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1916"/>
    <dbReference type="eggNOG" id="COG0297">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009583_2_5_9"/>
    <dbReference type="OMA" id="DDGANPF"/>
    <dbReference type="OrthoDB" id="694191at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13579">
        <property type="entry name" value="Glyco_trans_4_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="76"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="185"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="43233" checksum="2645CDFC1E8BA8A8" modified="2011-01-11" version="1">MKLLQALFFPPEQPGGVSSMIPYLQERFTSPRWEMELFSIPKRIRNKGRDEVIFDTFDWTRYEQYPIVQKYIQTYRDYLWWTRLRIQKPFDLIHAHHPIAGLAMKNVFPDIPLVQTIHSSYEKELILNGKIEENGPEHQFLVSLYREMEHKADRLIAVSQSFQHYLTPYVQHPQDVVVIPNGYDEKRFKPIPHENEVTQLITVCRLVPAKGLDILLQACAELKKRNQEFVLHIIGDGPIRPELEEMARQLDIYHETIFYGYTLHPEEFMPFFDVFVLPSRAEAFGSVFAEAALSCLALVGTEVGGIPEQIEDGVNGLLVPPDNPKALADALEKVIADPAYRYELARSACDKAKSSYSLSRAVNELKKMYLKFPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHB6</accession>
    <name>E3EHB6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_09130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370524.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21600"/>
    <dbReference type="EnsemblBacteria" id="ADO55907">
        <property type="protein sequence ID" value="ADO55907"/>
        <property type="gene ID" value="PPSC2_09130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1925"/>
    <dbReference type="eggNOG" id="ENOG50349UQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1502071_0_0_9"/>
    <dbReference type="OMA" id="TSMPHTA"/>
    <dbReference type="OrthoDB" id="1454584at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="20184" checksum="FDEEA51EAA326978" modified="2011-01-11" version="1">MISSDTTQHSCSLVKSYLLLTFIQKVFERDSLILQESGVLKTPDLYVEMVNAGIDRTGILLSEIKHEFKKYHVRVLDIQQNHSGVHATYIYKGVKEQFSMPMSAFRKEMYERMRAYLGLPTSMPHTASLPLPEKYRPELPNNSTPKPLPVVGRSWIASSSAYKHKSPRPAAFAASKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHJ9</accession>
    <name>E3EHJ9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">Phosphate propanoyltransferase</fullName>
            <ecNumber evidence="4 7">2.3.1.222</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">2242</name>
        <name evidence="8" type="ORF">PPSC2_10280</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>phosphate + propanoyl-CoA = CoA + propanoyl phosphate</text>
            <dbReference type="Rhea" id="RHEA:28046"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57392"/>
            <dbReference type="ChEBI" id="CHEBI:58933"/>
            <dbReference type="EC" id="2.3.1.222"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="7">Polyol metabolism; 1,2-propanediol degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the PduL family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.222" evidence="4 7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370759.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22750"/>
    <dbReference type="EnsemblBacteria" id="ADO56151">
        <property type="protein sequence ID" value="ADO56151"/>
        <property type="gene ID" value="PPSC2_10280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2166"/>
    <dbReference type="eggNOG" id="COG4869">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_080676_1_0_9"/>
    <dbReference type="OMA" id="EMRERPI"/>
    <dbReference type="OrthoDB" id="1156172at2"/>
    <dbReference type="UniPathway" id="UPA00621"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051144">
        <property type="term" value="P:propanediol catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008300">
        <property type="entry name" value="PTAC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39453">
        <property type="entry name" value="PTHR39453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06130">
        <property type="entry name" value="PTAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF010130">
        <property type="entry name" value="PduL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR010130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="190" mass="20323" checksum="B92ED0F218789345" modified="2011-01-11" version="1">MTKIVPVGVSARHIHLTQEHIEILFGAGYQLTEFKPLSQPGQFAANETVAVIGPKGQFDKVRILGPARPASQLEISRTDSFAIGVKAPVRESGSIDGTPGITVKGPAGEVELQEGVIVAARHIHFHTSDAAKWDIKDKQLLKVRVGGERGLVFENVIARVSDSFALDMHIDTDEANGAGVKNGDNAEIVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHL4</accession>
    <name>E3EHL4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ADP-heptose synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370774.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22820"/>
    <dbReference type="EnsemblBacteria" id="ADO56167">
        <property type="protein sequence ID" value="ADO56167"/>
        <property type="gene ID" value="PPSC2_10350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2180"/>
    <dbReference type="eggNOG" id="ENOG50310SJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1524421_0_0_9"/>
    <dbReference type="OMA" id="WIHRIIE"/>
    <dbReference type="OrthoDB" id="1311215at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="170" mass="19549" checksum="5BDDF2A536FD1684" modified="2011-01-11" version="1">MSRQFVTEAVMVAIYGQLLTSPAPVEYIVPYTSLLELYEFQDSTEPLMDNPMDDQHVKRKVSELISYFEEPLNQKKIRRALQMPWAKSLPILFDANTSLIVINAVDTAHYGEYFDPIETELVLTAQREALPILTDQLDWIHRIIEASVPVHVYDIDDFDFAVDGPMFNNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHS3</accession>
    <name>E3EHS3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L33</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpmG</name>
        <name evidence="5" type="synonym">rpmG1</name>
        <name evidence="5" type="ORF">PPSC2_11100</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial ribosomal protein bL33 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370941.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23490"/>
    <dbReference type="EnsemblBacteria" id="ADO56335">
        <property type="protein sequence ID" value="ADO56335"/>
        <property type="gene ID" value="PPSC2_11100"/>
    </dbReference>
    <dbReference type="GeneID" id="66577711"/>
    <dbReference type="KEGG" id="ppm:PPSC2_11100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2352"/>
    <dbReference type="eggNOG" id="COG0267">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_190949_0_2_9"/>
    <dbReference type="OrthoDB" id="2034291at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00294">
        <property type="entry name" value="Ribosomal_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038584">
        <property type="entry name" value="L33_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001705">
        <property type="entry name" value="Ribosomal_L33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018264">
        <property type="entry name" value="Ribosomal_L33_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43168">
        <property type="entry name" value="PTHR43168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00471">
        <property type="entry name" value="Ribosomal_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01023">
        <property type="entry name" value="rpmG_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00582">
        <property type="entry name" value="RIBOSOMAL_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="49" mass="5980" checksum="815FA82CC6A21215" modified="2011-01-11" version="1">MRVIVTLACTESGDRNYTTTKNKRNHPERIEMRKYSPRLKKYTIHRETR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ3</accession>
    <name>E3EHZ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_11810</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371090.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2514"/>
    <dbReference type="EnsemblBacteria" id="ADO56485">
        <property type="protein sequence ID" value="ADO56485"/>
        <property type="gene ID" value="PPSC2_11810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2500"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106285_0_0_9"/>
    <dbReference type="OMA" id="VYHYYSN"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="3">
        <location>
            <begin position="14"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="248" mass="26394" checksum="DF8B22173666B4C6" modified="2011-01-11" version="1">MSPRTKEQNEEIRLRRLAQIRKAAADVFLNKGPLLEIRDVAVQAGLGYGTVYHYYSNKGNLLHDLLWDALERAGGWLETPLEAQPKAPPASASEKTPAGGHFGLAAAADTGNSAVADSQSGSRETAAATELGPVAAAGVRLLQLWAEDHALYLLHKLAGEGFASLPEGRSAPLSAAFRREVLTPLAALLETDRAADGTAASGGNAAEPPYRLQRTEMLLAALVGCASLSLRRGKLHEEARDIVRFLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIM7</accession>
    <name>E3EIM7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Iron ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yurY</name>
        <name evidence="6" type="ORF">PPSC2_07980</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily. Ycf16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370290.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20675"/>
    <dbReference type="EnsemblBacteria" id="ADO55665">
        <property type="protein sequence ID" value="ADO55665"/>
        <property type="gene ID" value="PPSC2_07980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1678"/>
    <dbReference type="eggNOG" id="COG0396">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_48_1_9"/>
    <dbReference type="OMA" id="MAMLEPK"/>
    <dbReference type="OrthoDB" id="1214676at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03217">
        <property type="entry name" value="ABC_FeS_Assembly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010230">
        <property type="entry name" value="FeS-cluster_ATPase_SufC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43204">
        <property type="entry name" value="PTHR43204"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01978">
        <property type="entry name" value="sufC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="29023" checksum="08618AD6FD599B76" modified="2011-01-11" version="1">MATNFKIEGLKATIEGKEILKGINLEMKGGEIHAIMGPNGTGKSTLASALMGHPKYEVTDGKVTLDGEDVLDMEVDERARAGLFLAMQYPSEIAGVTNSDFLRSAINARREEGQEISLIKFIRQMESKMKELEMNPEFAHRYLNEGFSGGEKKRNEILQMMMLDPKIVVLDEIDSGLDIDALRIVANGVNAMRSEDRGFLVITHYQRLLNYIKPDYVHVMMQGRIVKSGGPELAERLEADGYDWIKEELGIVDETVGQEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIU5</accession>
    <name>E3EIU5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mcpB1</name>
        <name evidence="8" type="ORF">PPSC2_09400</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370581.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21870"/>
    <dbReference type="EnsemblBacteria" id="ADO55964">
        <property type="protein sequence ID" value="ADO55964"/>
        <property type="gene ID" value="PPSC2_09400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1981"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_27_9"/>
    <dbReference type="OMA" id="MSEMGEA"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024478">
        <property type="entry name" value="HlyB_4HB_MCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12729">
        <property type="entry name" value="4HB_MCP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168236" evidence="5">
        <location>
            <begin position="33"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="187"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="209"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="281"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="567" mass="61315" checksum="5D314173F492C741" modified="2011-01-11" version="1">MFKLTLKKKIISAALILVIVLSLSSVIGVIKMSEMGEASDKVNNRSLPAVILLQGMDKQITEIDRLTVRMILEEDAAARSTYQEELAKATDSMDKSVNKYQSLASTAEEKELFTNFYGQWAMYLRHLKVVSAAMEENDKVMAYMIIHGNSSIYKAALDDVNKLKLLNEQYATEAANQSSQSYHSGRLLMISLTIICTILGIIGSFLLAQSFTKPILKIAEQIKLVTRGDLQVEPLRVRSKDEVGELASDFNEMCDSLRNLLKEVVDNSLLVASTAEQLTASAEQTSIATEQIAISATQVAEGSQTQLADIAETLNYTVGVSKSVESITNRFVNVANLTTQAQEKANNGKTQMSSTVSQIRDVHTKVTQSAEVVNILGEKSAEIRQITAMISDISARTNLLSLNASIEAARAGEQGKGFAVVAYEVRNLSAQASEATGKISSLVNEIALRTDEVVISMNEGVQSLNEGMMLVEGVGNVFSEIVGAVEEVSGEVDTAAVEARSVNEGTVSMVESMKKIAEISERAADSTQTVASVVEETTASMEEVSAGANMLAKRAEEMNQTVSVFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIV5</accession>
    <name>E3EIV5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">marR7</name>
        <name evidence="2" type="ORF">PPSC2_09445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370591.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21915"/>
    <dbReference type="EnsemblBacteria" id="ADO55974">
        <property type="protein sequence ID" value="ADO55974"/>
        <property type="gene ID" value="PPSC2_09445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1992"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_18_6_9"/>
    <dbReference type="OMA" id="ITHRKMS"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="17426" checksum="33E4C020AA85BED8" modified="2011-01-11" version="1">MNNLPPDCSIGMLLGITHRKMSQQLLHRLKPYDISPEQWSVLYQIYQAEGLNQKEIAAKAVKDQPTTTRIIDLLDKKGWVRRVNSPQDRRAYLLHLTEAGRQLVEETLPVERDANHDFVKGISSADLKQFRHILLQIHTNMTESEKQGEND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIW1</accession>
    <name>E3EIW1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cheW1</name>
        <name evidence="7" type="ORF">PPSC2_09475</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370597.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21945"/>
    <dbReference type="EnsemblBacteria" id="ADO55980">
        <property type="protein sequence ID" value="ADO55980"/>
        <property type="gene ID" value="PPSC2_09475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1998"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="MEQGNVE"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="201"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="225"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="295"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="589" mass="64222" checksum="E3B4237C9691EF35" modified="2011-01-11" version="1">MKKWSSLSFFTKNLLLSFFNIVLIGLVLIVSSYLIQRTILIDQLHGQVEKITLKWAQGINSDEVSQAVQEKNYDGPIQTKLRTYLDNIMATNPNISHAYIFGTELENGNQTSIVAMPTDLRESFEKDKMGVGAMYEQPNVVAVGVTSMLDSGKPTFTSFYDDSFGTWTTLMTPIKDPSGKIFAYFAVDADAGAVPAGLTKLLISGATILVIFLLICLALQYWVVKRTLSPIKQLMYGISEVSRGNLDVQIHTGQDDLGLVNQNFNDMVSHINSIMTKVKQTTDEVNESAKELLAICEQNGINSNIINQNINEITDNIRSQEKATGDSARAMAEMASVIQNIATSSSNVAEEANSVEKRSNEGNEIVDKVSSQMHLITDSVTNTSRIIKLLDSRSQEIGNIISTISGISSQTNLLALNASIEAARVGEEGKGFAVVANEVRKLAEQSAEATKQITSLIEEIQSEIGQAVNSMEQGNVEVQNGIVVAGQAGELFNDILQATKNLAWQIQEVSSATEQISAGTQEMTATADDLSSTVTKTANNSVHIMQTVEEQKASLDSIIESSHKLTSMSEELQEITSYFKIADTNRTKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIY6</accession>
    <name>E3EIY6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ydaO1</name>
        <name evidence="6" type="ORF">PPSC2_09600</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370622.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2033"/>
    <dbReference type="EnsemblBacteria" id="ADO56005">
        <property type="protein sequence ID" value="ADO56005"/>
        <property type="gene ID" value="PPSC2_09600"/>
    </dbReference>
    <dbReference type="GeneID" id="66578019"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2023"/>
    <dbReference type="eggNOG" id="COG0531">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017999_1_1_9"/>
    <dbReference type="OMA" id="VGHWYEH"/>
    <dbReference type="OrthoDB" id="100199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002293">
        <property type="entry name" value="AA/rel_permease1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13520">
        <property type="entry name" value="AA_permease_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="48"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="145"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="174"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="214"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="249"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="299"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="349"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="372"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="406"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="431"/>
            <end position="448"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="605" mass="66739" checksum="5BCD3CBA1A95D03B" modified="2011-01-11" version="1">MLSKVKRLLIGRPRKSTALEDEKLNKLKALAILSSDALSSVAYGTEQILLVLITAGFAALWYSIPISIAVLGLLIILILSYRQTIFSYPGGGGAYIVAQDNLGKSPSLIAGGSLLVDYILTVAVSSSAGTDAITSAFPSLHDHRIAIALVMIIFLTIMNLRGVTESASVLAIPIYLFVVAIFVLIISGIIHYLAGGAHAAAPQFGATVSNVSLFLLLKAFSSGCSALTGVEAVSNAIPNFRKPAAKNAATTLMMMGLILGCMFIGISLLAYWYGVRPNPQETVISQIANATFGRGVMYYIIQGVTALILFLAANTAYSAFPLLAFMLAKDKYMPHMFMVRGDRLGYSNGILFLSIFSALLVIVFGGNTENLIPLYAVGVFIPFTLSQLGMMIRWIRLKPAGWVVKLAINTVGMLTTLSITLIFIFTKFSQVWVVFIFLPLVLYFFMKINKHYKNTAEQLRIDITKDKPMVKGNTIIIPVAGITRVVMNTISYAKTLSDNVVAVYVGVDDEAIQKMEQKWEEWDVGIRLVVLRSRYRSIINPLRKFIDTVEWKKADEDHITVLIPQFITKHWWENILHNQTSLLMRAYLINYKDVIVTTVPFHLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJD5</accession>
    <name>E3EJD5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Alpha-galactosidase</fullName>
            <ecNumber evidence="5">3.2.1.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Melibiase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_11525</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>Hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids.</text>
            <dbReference type="EC" id="3.2.1.22"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glycosyl hydrolase 27 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.22" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371027.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23890"/>
    <dbReference type="CAZy" id="GH27">
        <property type="family name" value="Glycoside Hydrolase Family 27"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56422">
        <property type="protein sequence ID" value="ADO56422"/>
        <property type="gene ID" value="PPSC2_11525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2437"/>
    <dbReference type="eggNOG" id="COG3345">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013093_5_0_9"/>
    <dbReference type="OMA" id="AMTPTMG"/>
    <dbReference type="OrthoDB" id="469334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052692">
        <property type="term" value="F:raffinose alpha-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14792">
        <property type="entry name" value="GH27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002241">
        <property type="entry name" value="Glyco_hydro_27"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041233">
        <property type="entry name" value="Melibiase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11452">
        <property type="entry name" value="PTHR11452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16499">
        <property type="entry name" value="Melibiase_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17801">
        <property type="entry name" value="Melibiase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00740">
        <property type="entry name" value="GLHYDRLASE27"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Melibiase_C" evidence="6">
        <location>
            <begin position="355"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF17801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="429" mass="48519" checksum="9E5E7BDCF098DDED" modified="2011-01-11" version="1">MKHHLTAHTPPMGWNSWDCYGAAVREEEVRGNAQYMAEHLKEYGWEYVVVDIQWYESGAVSSQYRPFVPLEMDSYSRLIPAVNRFPSAADGRGFQALAEYVHGLGLKFGIHIMRGISRQAVHQDTPILGTTATARQIAHPNSICPWNTDMYGVDASKEGAQEYYNSLFDLYAEWGVDFVKVDDIAASRLYGIHLAEIELIKRAIAQCGRPMVLSLSPGPAPLEHASDLIANANMWRMTDDFWDVWPLLYGMFERCEKWAEHVGPGHWPDCDMLPLGHLGIRSVDSVDSGSHDRWTRFTKDEQLTMMTLWSIFRSPLMFGGELRDNDEWTLSLLTNKEVLDVHHNGVNARQIYRKDEHIVWTSHNEEGHVYAALFNAGDEASTVRVSLQELGIEGQASARDLWNHVDLGDIVQELSADLPPHGAALFIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJE4</accession>
    <name>E3EJE4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Oxalate decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">oxdC</name>
        <name evidence="5" type="ORF">PPSC2_11570</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="2">Binds 2 manganese ions per subunit.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56431.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885944.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23935"/>
    <dbReference type="EnsemblBacteria" id="ADO56431">
        <property type="protein sequence ID" value="ADO56431"/>
        <property type="gene ID" value="PPSC2_11570"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11570"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2446"/>
    <dbReference type="eggNOG" id="COG2140">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_030515_2_0_9"/>
    <dbReference type="OMA" id="HPNNDEW"/>
    <dbReference type="OrthoDB" id="1928636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033609">
        <property type="term" value="P:oxalate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017774">
        <property type="entry name" value="Bicupin_oxalate_deCO2ase/Oxase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00835">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03404">
        <property type="entry name" value="bicupin_oxalic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0464">Manganese</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin type-1" evidence="4">
        <location>
            <begin position="55"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin type-1" evidence="4">
        <location>
            <begin position="233"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="338"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="278"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="280"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="285"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="324"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR617774-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR617774-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56431.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="396" mass="44030" checksum="0EF851729FDB28D1" modified="2015-05-27" version="2">MHNDCSKKVRIPQPIRNDGAGGIDKGPRDVMRDLQNPDMLVPPVTDNGLIPNMRFSFSDAHMQLNQGGWSREVTVRELPIATTLAGVNMSLTPGGVRELHWHQQAEWSYMLLGSARITAVDQDGRNFIADVGPGDLWYFPPGIPHSIQGLEEGCEFLLVFDDGSFSDLNTLSISDWFAHTPKEVLSANFGIPEADFAEIPQDQVYIYQDSVPGSIQSQAVPSPYGTLPQSFKHELLAQPPIKTPGGSVRIVDSSNFPISKTIAAALVEIEPGAMREMHWHPNNDEWQYYLAGQGRMTVFGGNGAARTFDFRAGDVGYVPFAYGHYIQNTGSSTLWFLEMFKSDRFADVSLNQWMALTPKELIQSNLHVGADVISNLRKVKWPVVKYPGYSYDPKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJG6</accession>
    <name>E3EJG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cytoplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yrkD</name>
        <name evidence="1" type="ORF">PPSC2_11950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013310304.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24270"/>
    <dbReference type="EnsemblBacteria" id="ADO56516">
        <property type="protein sequence ID" value="ADO56516"/>
        <property type="gene ID" value="PPSC2_11950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2531"/>
    <dbReference type="eggNOG" id="COG1937">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_130332_1_0_9"/>
    <dbReference type="OMA" id="DCRDVIT"/>
    <dbReference type="OrthoDB" id="1868412at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003735">
        <property type="entry name" value="Metal_Tscrpt_repr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038390">
        <property type="entry name" value="Metal_Tscrpt_repr_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33677">
        <property type="entry name" value="PTHR33677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02583">
        <property type="entry name" value="Trns_repr_metal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="88" mass="9907" checksum="2AB8FCBD78E39F02" modified="2011-01-11" version="1">MDYNYSDELKTRLRRIEGQVRGVLRLMDEGKSCKDVVSQLSAVRNASDKAIAQIVAENLQRCILEEQEAGGDTDKLVKEAIQLLVKSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJI4</accession>
    <name>E3EJI4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yvdQ</name>
        <name evidence="1" type="ORF">PPSC2_12055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56534.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025678384.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24385"/>
    <dbReference type="EnsemblBacteria" id="ADO56534">
        <property type="protein sequence ID" value="ADO56534"/>
        <property type="gene ID" value="PPSC2_12055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2550"/>
    <dbReference type="eggNOG" id="ENOG502ZBP3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127503_0_0_9"/>
    <dbReference type="OMA" id="EKGWLIP"/>
    <dbReference type="OrthoDB" id="1372380at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021617">
        <property type="entry name" value="DUF3231"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11553">
        <property type="entry name" value="DUF3231"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56534.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="18589" checksum="0FB81D4DEFD4AE76" modified="2015-05-27" version="2">MGILSGNPKDEPMHYGEISGVWQFSLAAKGALSFYQAFLNHAGDKDLRKILDALIDQAKLEIKECDTLLTDNGIAPAPALPERPPVKLEDIPVGARFTDPEIAAKIASDTSLGLVACSQVMGQSIREDIGALFAKYHATKTALGVKILQMSKEKGWLIPPPLQVKRPEAVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJV8</accession>
    <name>E3EJV8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386120.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0315"/>
    <dbReference type="EnsemblBacteria" id="ADO59706">
        <property type="protein sequence ID" value="ADO59706"/>
        <property type="gene ID" value="PPSC2_26615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5619"/>
    <dbReference type="HOGENOM" id="CLU_2634781_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8984" checksum="FD239FA2D0584265" modified="2011-01-11" version="1">MREKIRFNRQWYWLPEGFTIREDAITGIQTIVDPRGFHAHLMHTADLKGAWMTTNALTNMSQPLEKVMDSNKYSVTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKC8</accession>
    <name>E3EKC8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27785</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385869.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0061"/>
    <dbReference type="EnsemblBacteria" id="ADO59455">
        <property type="protein sequence ID" value="ADO59455"/>
        <property type="gene ID" value="PPSC2_27785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5888"/>
    <dbReference type="eggNOG" id="COG3481">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_871095_0_0_9"/>
    <dbReference type="OrthoDB" id="2018439at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="319" mass="36317" checksum="044A42BC066CCBD8" modified="2011-01-11" version="1">MKTKIKDLQKGQEAIIEGTIIKDKKFKQTNSNEPWIHLKVTDQSRSSAYAKIWNELELYPVIEEMEDGTYIEANVKCTQSDEFIHIEIQSIQVIERKTKEMVDAEGLKAELRAAISGIKDLKLKKLIKVVFTRPDIKETYFKAPATMMSGYSFEGGALAYVVRSIRLVKAVALVFNEWNHNADGITAKLSEDFLTTACILEAVGRTKSLRMNGVRVEKTTEGEMFEDAYLTLKVIWEEIGKINLSDEQRLMLEHVIGSSKGKSEWGALHIPRSREAVAFGIILNLNFQMGNFEYLERHAGTEDTFAKLFKKQMYLGAYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKP2</accession>
    <name>E3EKP2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385907.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0099"/>
    <dbReference type="EnsemblBacteria" id="ADO59493">
        <property type="protein sequence ID" value="ADO59493"/>
        <property type="gene ID" value="PPSC2_27615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5850"/>
    <dbReference type="HOGENOM" id="CLU_299509_0_0_9"/>
    <dbReference type="OrthoDB" id="1496325at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168257" evidence="1">
        <location>
            <begin position="26"/>
            <end position="975"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="975" mass="111490" checksum="6B7809D672D46418" modified="2011-01-11" version="1">MKKFRVISALALTALIGLGLTMSFNTDTIKSNALGNVRKTIPNYTGRDPSVDPPYSFRFNPAANTPQSEYYGGSKVFYEELYRGQFLWYSKVKPMDATEADKDMMTMYENRLRVWGKNRSDWLVNKSYSLNLKTGQSEPGKQNYTPGGTTYMVSGPYAGKYLEWRYLGYAFDGSPVNNPYFPPDITPEKWEPWTKNWISEPWDQGLTAGTEYDQMNEKVQWFVDYFFPENPKFRRAWMPIEKDAADWAKKFTLQTDPTRSTGILTGFHVSNGNTYYATLLMKTPAQPNLRMVEYAVYDKETGKLVGKQTMNASDNTDMTETRKYYDQNGKETTKGIIEQGKTYVIKAKVKNMIVKGLDGKNTTYTPIRLNQKYSYDLTSHEMGQWDEEYGNSVLTTKPETTIAYGKSVDFSKQKMDGESEETWEYTVPPMVKKEIVFHADIVEGFKKKRENTWAQDDIGRLRFFIQPEDIGTPDEALLINAKGVPVEHVVPKEPYSLRFYVDKVLGEKSVGDPKDPSNPYASLQVVVSDKKTSKTITAVAKEVLTPKGKRVAIDVPNAITPQTSIIEATWQIPQKHRDNNQSMDPSNDGPHKHLWASDINISVSNFNIKPSSIILPAGKSSSNETLTFDFNILSENAENQDKDIDVVIRKDGRVIWRDTVSVPANRNYTMPMVTVPGINVREGENVFTVEVNPQPRKWIEFLSNATDPNQVYKDNVATNSIMVHKNIPAQNCQILNNQNNWTTIHYIREWHGYREYTEHGSYCVTTSDRRWTEKINYYERYKITNVFFRSKLTKDQALRDGNNGDGWVDLLNGKAGEVKAGYGFEIKYVVKYQTNTYTDSPKPWRADCSGKTVDPTHGSYVDAPNTLQVTMPFKDTSGQPVRYYATTTSESGSWDNLTQNYEMPVRKAFNLKDTREIFINETAKDGEYPVRIDTYSHFYGSYDKKPTSKYLCDYVIVKIKVNGSDKDDVKTHLTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKW3</accession>
    <name>E3EKW3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386282.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0479"/>
    <dbReference type="EnsemblBacteria" id="ADO59868">
        <property type="protein sequence ID" value="ADO59868"/>
        <property type="gene ID" value="PPSC2_25855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5431"/>
    <dbReference type="eggNOG" id="COG1476">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_44_1_9"/>
    <dbReference type="OMA" id="HYFGEVS"/>
    <dbReference type="OrthoDB" id="2063007at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="9223" checksum="5A43A1FB26B0CA83" modified="2011-01-11" version="1">MHYFGEVSNQVYILRAERRWSQSELAEKLGVTRQTIAAIENNKYIPSLELAFAIAHVFEREIQEVFQFQPELNHEEDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL66</accession>
    <name>E3EL66_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0235"/>
    <dbReference type="EnsemblBacteria" id="ADO59628">
        <property type="protein sequence ID" value="ADO59628"/>
        <property type="gene ID" value="PPSC2_27000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5709"/>
    <dbReference type="HOGENOM" id="CLU_1072232_0_0_9"/>
    <dbReference type="OrthoDB" id="2167760at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="286" mass="33060" checksum="5242859C88FF3F5F" modified="2011-01-11" version="1">MIVHIQNNGILDIEDYRAESGQYGITDYLKDSHVKVLESFKPEEMILNSEIKDTITLYHGTTTAYLNQILKHGLLPRKETDNDNYEKISSSASNTVYLTNKWHYVYAYKATDVYIQKKAKQEGREVFPWWMSWETIPCYIECEVPKALLVPDEDFFHSKYISQKIKSALKKGIDYIEMTWEESLAHYATVGVVGGIPAKYIKSFSILGELELQKELMYDKSAYQKDLKKWATGKGKGDLKLLDLILREDRSTMNGAWFMNQLPKNKEIKQIGKNPSSNTIAIVFER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELE1</accession>
    <name>E3ELE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386387.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59973">
        <property type="protein sequence ID" value="ADO59973"/>
        <property type="gene ID" value="PPSC2_28315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6006"/>
    <dbReference type="HOGENOM" id="CLU_1293287_0_0_9"/>
    <dbReference type="OMA" id="CINGNHR"/>
    <dbReference type="OrthoDB" id="1288068at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="24885" checksum="933B707F597B3A03" modified="2011-01-11" version="1">MDKHDFYGKRAGAFDLNKHFQMLLTVLKGEPIARDLTLRWKDIILSLISEEGYPPPMDITHEIYSLVVGYDSGSFEFRFNIDLANTLLPAMNKLAVELPVREAIKYVDIDNLNLKRAVKNHNNPILIIKSYLFDQPHCINGNHRIYRAYERGQKTISLYYIENHECLPFLSTRIGRAMYMMNTDLNCIFHQQGEIDISSLFIERAEDWLCMHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCH5</accession>
    <name>A0A0D5ZCH5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YuzF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yuzF</name>
        <name evidence="1" type="ORF">PPSC2_16030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025676485.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44276">
        <property type="protein sequence ID" value="AKA44276"/>
        <property type="gene ID" value="PPSC2_16030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3426"/>
    <dbReference type="HOGENOM" id="CLU_189924_0_0_9"/>
    <dbReference type="OrthoDB" id="2011069at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020139">
        <property type="entry name" value="DUF2642"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10842">
        <property type="entry name" value="DUF2642"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="88" mass="10106" checksum="2189F3477D74B2D9" modified="2015-05-27" version="1">MNSNQMFNYNVNQPFPHHPTSHHVVVHPVDPYVVETLKSMIGKYVVLETTRGRIDGCVVDSKPDHVILDVYGKKFFVRISEIVWIMPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4B0</accession>
    <name>E3E4B0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-oxoglutarate dehydrogenase E1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371254.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2682"/>
    <dbReference type="EnsemblBacteria" id="ADO56650">
        <property type="protein sequence ID" value="ADO56650"/>
        <property type="gene ID" value="PPSC2_12595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2673"/>
    <dbReference type="eggNOG" id="ENOG503347I">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051256_2_1_9"/>
    <dbReference type="OMA" id="SMIQPWA"/>
    <dbReference type="OrthoDB" id="2016960at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007374">
        <property type="entry name" value="ASCH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04266">
        <property type="entry name" value="ASCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ASCH" evidence="1">
        <location>
            <begin position="4"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="16567" checksum="7E9321609FC3A340" modified="2011-01-11" version="1">MKVLSMIQPWATLLVQGETLYETRSWKTRYRGPLAIHASQKVDKQACKYELIRSLLAKNGYTEQSLPTGVILATCELTNCYQVIDANHTSAILDCGKVVTGEDFLLGDYSPGYFAWQIAGFRLLKPYIPAKGKLGLWEHPIDEELMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4C3</accession>
    <name>E3E4C3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2696"/>
    <dbReference type="EnsemblBacteria" id="ADO56663">
        <property type="protein sequence ID" value="ADO56663"/>
        <property type="gene ID" value="PPSC2_12645"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2685"/>
    <dbReference type="eggNOG" id="COG5492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1022493_0_0_9"/>
    <dbReference type="OMA" id="NGGCAIR"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003167996" evidence="1">
        <location>
            <begin position="42"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="272" mass="29522" checksum="6B0BDDA02F17864E" modified="2011-01-11" version="1">MLPLIKKFRLNQNLTSYLKLILVVIILAVAIVSVAPSRAHAFSGTGNGTEQDPYIITTAAMLDDIRTNPSAYYKLGANIQLTDYTWNPIANFAGAFDGNGYTISGLTINQPLSMDVGFFGNLTATGVVRNVRLMDVNIIGNRNVGSVTGTSFDQISNVFASGSVEALGEGAYDYAGGLVGVNNASITQSISAVNVRGTKSAGYVGGIAGYNVRGTVSQSYGNWPSGWTIPRWWFSRIQSYRNREQFLFNGFSHNDRQPSWRTCWTKCWSGPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4D7</accession>
    <name>E3E4D7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">araC3</name>
        <name evidence="2" type="ORF">PPSC2_12700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2710"/>
    <dbReference type="EnsemblBacteria" id="ADO56677">
        <property type="protein sequence ID" value="ADO56677"/>
        <property type="gene ID" value="PPSC2_12700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2700"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_933333_0_0_9"/>
    <dbReference type="OMA" id="EECKEID"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00165">
        <property type="entry name" value="HTH_AraC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="177"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="34272" checksum="FBB74081EE354620" modified="2011-01-11" version="1">MDYALGNMVVHIHWVIAKPPLPGWEDIRQTVSGHTFYYIYSGKGTFRCEESDLEVSGGTLVYLWPGLPLYMKSSDAHPLRMTMILFDCASLIKNENEWDTPKSIERLRLPFLMPLQSERAGRIGEQFREAEREWVPGDLVRETRVKSVWYRLVQEVHEAAEAGGRHNDGDGIVEALRKFKEKLDTAFATELRITELAEQTGFSPVYLRRTFGSRYGCSPKEYLNHLRNEHAVCRFAGSCSQVIPSQISREPVAILTYTSSVKRSKSAMVSLRSSTEECKEIDTKGDIIRFAFEFDSQQCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E512</accession>
    <name>E3E512_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydeP7</name>
        <name evidence="2" type="ORF">PPSC2_15260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371810.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02880"/>
    <dbReference type="EnsemblBacteria" id="ADO57220">
        <property type="protein sequence ID" value="ADO57220"/>
        <property type="gene ID" value="PPSC2_15260"/>
    </dbReference>
    <dbReference type="GeneID" id="66576932"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3259"/>
    <dbReference type="eggNOG" id="COG1733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111585_5_3_9"/>
    <dbReference type="OMA" id="GEQRFNE"/>
    <dbReference type="OrthoDB" id="2057904at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="18"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="13498" checksum="92ECB75119262D0C" modified="2011-01-11" version="1">MQKKVKNLESQPQFTKMCPRFETAFSCLGKRWNGLIIQSMMSGPKRFKDISNLIPTMSDKMLSERMKDLENEGILTRHVYPETPVRIEYELTTKGRALQPVMEQIQFWAEEWIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E528</accession>
    <name>E3E528_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yitT5</name>
        <name evidence="8" type="ORF">PPSC2_15335</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371826.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02960"/>
    <dbReference type="EnsemblBacteria" id="ADO57236">
        <property type="protein sequence ID" value="ADO57236"/>
        <property type="gene ID" value="PPSC2_15335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3276"/>
    <dbReference type="eggNOG" id="COG1284">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063199_4_0_9"/>
    <dbReference type="OMA" id="WRAGLVQ"/>
    <dbReference type="OrthoDB" id="1747063at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003740">
        <property type="entry name" value="YitT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02588">
        <property type="entry name" value="YitT_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="83"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="113"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="158"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="183"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="25438" checksum="EB6E380F7F6C2E16" modified="2011-01-11" version="1">MRKTYESIVNNGALRQIAVMLLGTCILAFTYYHINAQNHLSEGGFAGLALLGHYAFGISPAWSMLMLDVPVILLAWVLKGKRFMMLALIGAVAFSLFYAGFEKYSTLVIDLHGNLLIAALLCGVLTGLGAGIVLRFGGATGGDDILSLLISEWRGWKIGNVFIVSDIIVLGLSLLYLPVKETMFTILAVWLAGKIITWTTTFQLHRPVKKVLPAAIPAKKVVAKTVPVVHSLRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5F8</accession>
    <name>E3E5F8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ytdP3</name>
        <name evidence="5" type="ORF">PPSC2_17405</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04745"/>
    <dbReference type="EnsemblBacteria" id="ADO57677">
        <property type="protein sequence ID" value="ADO57677"/>
        <property type="gene ID" value="PPSC2_17405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3718"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_362415_0_0_9"/>
    <dbReference type="OMA" id="YMANQTF"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="297"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="678"/>
            <end position="776"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="779"/>
            <end position="801"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="801" mass="92584" checksum="3A373D5D4673B6E5" modified="2011-01-11" version="1">MLRLKLRLILKNKQTRLILLLTLCVSLVISVIGLLSYSRYREGLDTELNTPNIDLLQINLDVTNRAFRESDNKALDAAYHPDVESFIRIHTDGKSVSNKASVIDRLQKYLKTLSSSEEIYSVEVISLENHALISSNYGYLPDWNQAPDTTWVPWIQNIHKKPLLIKRRWYGTDQQHGTIELLSLARPIVENGQVIGAVLINLDYDRFFSKLYIHLSNSQYVYDLEGELIYPKLRSSLPLNEMGRVLKELDVNPYAYVEIGDMEYMANQTFSDVTGWRLVSLVPMDKLLKNVKLARNMMLWLALISILAGCSAVYYYNYAAFRPMKKINSLLNSGNKGTRQGGLYDLEPVISKLVGEFQRKSLVVERSLPELRSKYIEDVIQRRMGVQEMRTKWEQYFSDWDRTSLVVMVVSIDRYSIWTASFPEEDKMLLKYALNNILLEMLEPQWKAVSAPEEENGLVVLLQLRESVYEVGAEGAAKERTWLRKSVDRLIQVVGEYLPMTISVGIGHKVTDIQEVRASFIQGKEALNLRLYEGYGRSHMNMSSNINVKWDCIGDVQSQDQAQDARLLDHRRVDLIRAVESQEPGASAKLVSQWVEELRHYRTSPNQVYLFVHELLEDLLKWCATQSVTPPDQLADYHWNQILTLDLQDIELLLAIILNDIAEKWHGRQQSKDFVRVQETIDYMENYLHLNIGLQEIADHVHMSVSSVSSMFKEETGTTVYDYLTGLRVKKACVLLCETHLKIGEIAEQVGYRNENSFIRVFRKYKQVTPGKFRQINKSSNEYADRSKDRRFGEIEDKYED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5P3</accession>
    <name>E3E5P3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADPH-quinone reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372499.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05730"/>
    <dbReference type="EnsemblBacteria" id="ADO57920">
        <property type="protein sequence ID" value="ADO57920"/>
        <property type="gene ID" value="PPSC2_18515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3968"/>
    <dbReference type="eggNOG" id="COG2249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058643_1_0_9"/>
    <dbReference type="OMA" id="YPTWWYG"/>
    <dbReference type="OrthoDB" id="1143659at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="3"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="21965" checksum="83610381276B055E" modified="2011-01-11" version="1">MSKKILVIQGNPVADSYGEALAQAYVKGAEGAGAEVRLLQLSALEFNPNLSGGYRNKLPLEPDLIQAQEWIKWAEHLVFVFPIWWGSLPALMKGFIDRTFMPGFAFKYQKGKPLPDKLLKGRTARLISTMDGPHWYYRFFQGQPGHRMMKDSTLHLCGVKPVRSTTIDLMNKRTEQQRNEWLSKVEQLGHSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5S8</accession>
    <name>E3E5S8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyl esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cah3</name>
        <name evidence="2" type="ORF">PPSC2_18660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372533.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05880"/>
    <dbReference type="ESTHER" id="paeps-e3e5s8">
        <property type="family name" value="Acetyl-esterase_deacetylase"/>
    </dbReference>
    <dbReference type="MEROPS" id="S09.949"/>
    <dbReference type="EnsemblBacteria" id="ADO57955">
        <property type="protein sequence ID" value="ADO57955"/>
        <property type="gene ID" value="PPSC2_18660"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18660"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3999"/>
    <dbReference type="eggNOG" id="COG3458">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054209_1_0_9"/>
    <dbReference type="OMA" id="RAWYTRP"/>
    <dbReference type="OrthoDB" id="721431at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008391">
        <property type="entry name" value="AXE1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039069">
        <property type="entry name" value="CE7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40111">
        <property type="entry name" value="PTHR40111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05448">
        <property type="entry name" value="AXE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AXE1" evidence="1">
        <location>
            <begin position="1"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="35623" checksum="FDB4FA6CE8A7C76B" modified="2011-01-11" version="1">MNVIEKRIAELKQYGPDLTTPKDMDLFWDKTLREVHVKPVHAFKTPVETPYPHMMAYRVTFEGVDDTPLHAWYVRPRYAGDQKLPCIVLFHGYTGGKGYPEDYSSWLMLGFAVLAVDVRGQGGETGDRRNDPHGTVKGWVTKGILDKDTCYYKTITTDALRAVDWAAEQSDVDADKIAISGASQGGGLALMVGALSDKAATIVADIPNMCHMDFGMMNSTSSLTEAAEFANRFPEHLEQVLHTLSYFDVMNLAHRIRIPVMLSVGLKDTVCMPETIFAAYNRIESPKTIEVYPFTGHWVEGFHRRKTAEFLVQILALD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E612</accession>
    <name>E3E612_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372803.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07260"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58231">
        <property type="protein sequence ID" value="ADO58231"/>
        <property type="gene ID" value="PPSC2_20030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4268"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_778119_0_0_9"/>
    <dbReference type="OMA" id="ACRCPVL"/>
    <dbReference type="OrthoDB" id="635734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="174"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="364" mass="41596" checksum="681403FAC6599B47" modified="2011-01-11" version="1">MAKEVFDIKVLFTFYIPSGGVETLNRQRCRALIQDGIECHLLYYRQGTGMQNLHGDIPVFMTSSEEEIRNLVESHRYDAIIVSSDYPMLPRLRMLGYQGILIYESQGFGTHEEAARIVADAVPYLHNHANAVLLPETTHLVQLFSSICPWLNRFVFPNVLDTNVFNYVPNTPPANPVIAWVGRLEPNKNWRHFVDISYWMLKNRADLRIWMFYDDTLSQPEDKIQFEVMLAQLGMSTIIERLKSVPHAKMPLYYSMIGDSGGYLLSTSLVEGFGYAVAEAMACRCPVLSSDSDGVRAFIDHNETGKFYQQGDTLQAVLQGLELMNNVPHRESIRQKGRTQIVNLLAPDKYVRSFRQMMNSLGVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6S3</accession>
    <name>E3E6S3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ETR2</name>
        <name evidence="12" type="ORF">PPSC2_21230</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373044.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08460"/>
    <dbReference type="EnsemblBacteria" id="ADO58475">
        <property type="protein sequence ID" value="ADO58475"/>
        <property type="gene ID" value="PPSC2_21230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4512"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3437">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_114_15_9"/>
    <dbReference type="OMA" id="NQLEVQW"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
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    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
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            <end position="125"/>
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            <position position="57"/>
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            <dbReference type="Proteomes" id="UP000006868"/>
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    <sequence length="556" mass="61862" checksum="15EF555B489F8C9F" modified="2011-01-11" version="1">MGLHEPIHILLVDDRPENLLALEAVLESEQYNLVKATSGEEALRCLLKDEFALVVLDVQMPGMDGIETAKLIKAREKTKDIPIIFISANSKEAEHLFAGYSAGGIDYMVKPFIPQILKSKIEGFVQMYLTNKRLKTQSMLLHQKTQELEKMNSELIAAKEAAEIAANAKTEFLAMMSHEIRTPMNGVIGMIDLLMETELQNDQQEYADIIRRSADALVAVINDILDFTKLESGKMEVEEYPFDLVSCIKEVFSLFTVEVNRKNLELVYFLDEQTPPVLYGDMGRLRQVLINLVSNAVKFTDQGGVYVFASVKERSDNGLTVEFSVKDTGIGIDPAKVGRLFHPFSQLDSSMTRKYGGTGLGLAICKTLVDMMGGDIRVDTSGEQGVAFHFTMKLGVAKENELEGESSHDWEIPQQEPPTRKPVLVVDDHPINQKLMVNILDKLGLASDVAADGQQALDMVTANQDYDYIFMDLQMPVMDGLECTGRVREQLAGRSQPAIIAMTANVMEGIQPRCIEAGMNDYISKPVKISSVKQALLRHSPDHFPMQPGKDRINEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6X5</accession>
    <name>E3E6X5_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_22235</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="STRING" id="1406.LK13_09700"/>
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        <property type="protein sequence ID" value="ADO58677"/>
        <property type="gene ID" value="PPSC2_22235"/>
    </dbReference>
    <dbReference type="GeneID" id="66575620"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22235"/>
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    <dbReference type="OrthoDB" id="2004983at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="76" mass="9169" checksum="44C6ED2684AC2B28" modified="2011-01-11" version="1">MLGMLFNEKECKELDYVLRKELDEMLLDMSDTRLDQDIRYAIALRYKTVFRMYARFAPAKELSKYARRGRVPQTKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E728</accession>
    <name>E3E728_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">DNA-directed RNA polymerase subunit beta</fullName>
            <shortName evidence="6">RNAP subunit beta</shortName>
            <ecNumber evidence="6 8">2.7.7.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">RNA polymerase subunit beta</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Transcriptase subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rpoB</name>
        <name evidence="16" type="synonym">rpoB3</name>
        <name evidence="16" type="ORF">PPSC2_22475</name>
    </gene>
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        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
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    </organism>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 8">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6 8">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
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            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6 8">The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the RNA polymerase beta chain family.</text>
    </comment>
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        <property type="protein sequence ID" value="ADO58730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09940"/>
    <dbReference type="EnsemblBacteria" id="ADO58730">
        <property type="protein sequence ID" value="ADO58730"/>
        <property type="gene ID" value="PPSC2_22475"/>
    </dbReference>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032549">
        <property type="term" value="F:ribonucleoside binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
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    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00653">
        <property type="entry name" value="RNA_pol_B_RPB2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01321">
        <property type="entry name" value="RNApol_bact_RpoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019462">
        <property type="entry name" value="DNA-dir_RNA_pol_bsu_external_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007120">
        <property type="entry name" value="DNA-dir_RNAP_su2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037033">
        <property type="entry name" value="DNA-dir_RNAP_su2_hyb_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010243">
        <property type="entry name" value="RNA_pol_bsu_bac"/>
    </dbReference>
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        <property type="entry name" value="RNA_pol_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007644">
        <property type="entry name" value="RNA_pol_bsu_protrusion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007642">
        <property type="entry name" value="RNA_pol_Rpb2_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037034">
        <property type="entry name" value="RNA_pol_Rpb2_2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007645">
        <property type="entry name" value="RNA_pol_Rpb2_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007641">
        <property type="entry name" value="RNA_pol_Rpb2_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014724">
        <property type="entry name" value="RNA_pol_RPB2_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="PTHR20856"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04563">
        <property type="entry name" value="RNA_pol_Rpb2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="RNA_pol_Rpb2_3"/>
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    </dbReference>
    <dbReference type="Pfam" id="PF10385">
        <property type="entry name" value="RNA_pol_Rpb2_45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00562">
        <property type="entry name" value="RNA_pol_Rpb2_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04560">
        <property type="entry name" value="RNA_pol_Rpb2_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02013">
        <property type="entry name" value="rpoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01166">
        <property type="entry name" value="RNA_POL_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6 8" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="3 6 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA_pol_Rpb2_1" evidence="13">
        <location>
            <begin position="27"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_2" evidence="12">
        <location>
            <begin position="139"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_2" evidence="12">
        <location>
            <begin position="368"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_3" evidence="14">
        <location>
            <begin position="467"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_45" evidence="15">
        <location>
            <begin position="545"/>
            <end position="615"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_6" evidence="10">
        <location>
            <begin position="677"/>
            <end position="1070"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_7" evidence="11">
        <location>
            <begin position="1072"/>
            <end position="1146"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1156"/>
            <end position="1181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF04563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF04565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF10385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO58730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1181" mass="132103" checksum="B9BC1CE7558E810C" modified="2011-01-11" version="1">MAGHLVQYGRRTRRSYARINEVLEVPNLIEIQQKSYDWFLEEGLREMFRDISPIQDFTGNLILEFIDYSLGEPKYTVDDAKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTETGTFIINGAERVIVSQLVRSPSVYFSTKVDKNAKTTYTATVIPNRGAWLELEMDAKDIIYVRIDRTRKIPVTVLLRALGFGTDAEILDLLGNDEYIRNTLDKDNTDSTEKALIEIYERLRPGEPPTLDNAKSLLVARFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLIDTTTGEIIAEAGQMVDRRLLDEILAQLEESVGHRTYHVASGVLESNDIPLQTIDVFSPIEDGKVVKLIANGNIDKSVKNITPADIISSISYFINLLHGIGSTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDANVITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGMEVRDVHPSHYGRMCPIETPEGPNIGLINSLSTFARINEYGFIEAPYRWVDPKTGKVTDQIDYLTADEEDNYIVAQANAELTEENTFKDEIVIVRYNKQSDNIIPMASSRVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAVPLLIPKAPLVGTGMEHKSAKDSGVCVVSKYNGVIERSSANEIWLRRIETVDGTEVKGDIVKYKLHKFMRSNQGTCINQRPIVNRGDIVKVGDILADGPSTEMGELALGRNVVVAFMTWEGYNYEDAILLSEKLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALRNLDERGIIRIGAEIAAGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGTDGIVVDVKVFTRENGDELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFLPDGTPVQVVLNPLGVPSRMNIGQVLEVHLGMAAMRLGIHVATPVFDGAKEYDVFDTMEEAGMQRNGKTVLYDGRTGDRFEREVTVGVMHMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLGMDVKILSEDEQEIEMRELDDEDDTTGDKLSLNLEGSEVGVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7K9</accession>
    <name>E3E7K9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase M20</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhaA1</name>
        <name evidence="2" type="ORF">PPSC2_13350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371417.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01040"/>
    <dbReference type="EnsemblBacteria" id="ADO56814">
        <property type="protein sequence ID" value="ADO56814"/>
        <property type="gene ID" value="PPSC2_13350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2844"/>
    <dbReference type="eggNOG" id="COG1473">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023257_0_1_9"/>
    <dbReference type="OMA" id="KSHSPMA"/>
    <dbReference type="OrthoDB" id="796259at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017439">
        <property type="entry name" value="Amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11014">
        <property type="entry name" value="PTHR11014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005962">
        <property type="entry name" value="Pept_M20D_amidohydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01891">
        <property type="entry name" value="amidohydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="1">
        <location>
            <begin position="188"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="390" mass="42870" checksum="644BC056DA918359" modified="2011-01-11" version="1">MLEKWVQELKDGEQELIAWRRYLHQHPELSFEETNTSAFIADQLRSFGIEVRTNVGGNGVLGFLEGGQPGRTIAFRADFDALPIQDEKDAPYKSTVPGVMHACGHDGHTAALLGVARVLSHHRETLKGKLVFIFQHAEEKPPGGAKFMIEDGCLDGVEAVYGIHLSSEIPLGKIGLKSGPAMAAADAFSIEINGKGGHGARPHQTVDSIVIGSQIVNGLQQVVSRRVDPTESAVLTIGVFQAGTAFNVIADKAKIEGTVRTFNKDIRKEVENEIRSIVKGLTDAYHAGYEIDYLNGYPALVNAEAETERVRELVSRLYGADAFMDLKPAMGAEDFAYYLEQRPGAFIIVGARNEDERTHFAHHHPRFDFDERALLISGHIFLALALEYLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7M8</accession>
    <name>E3E7M8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">arpJ</name>
        <name evidence="15" type="ORF">PPSC2_13445</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
            <topology evidence="12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371436.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01130"/>
    <dbReference type="EnsemblBacteria" id="ADO56833">
        <property type="protein sequence ID" value="ADO56833"/>
        <property type="gene ID" value="PPSC2_13445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2863"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0834">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_20_4_9"/>
    <dbReference type="OMA" id="IMFVYFG"/>
    <dbReference type="OrthoDB" id="847343at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="11" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0564">Palmitate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0732">Signal</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="12" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168625" evidence="13">
        <location>
            <begin position="30"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="285"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="330"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="456"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="14">
        <location>
            <begin position="285"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO56833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="487" mass="53196" checksum="32FD44633AA704E1" modified="2011-01-11" version="1">MKKAYRFTALVLSAVILLLAGLPMLTAYGSEEKPQKKLVVGMSADFPPYEFHKVINGQDTIVGFDVEIAKEIAKDLNAEMVPEDMSFDSLLPALQSGRVDLVLSGMTPTDERRKSIDFSDVYYRSKQVIMVRPEDKDKYSTMAALKGEKLGAQKGSIQEEIAQKVPNASVTSLDKISDLVLQLRTNRINAVVIEDTVAKGYTLDGTVTLAKAVPEDEGAETAVGIRKGNAELLASVNKTLARLKADGSIEKFSTEASALSADRQVSSNSIVDIFLKYRSFYATGIGYTLLLSALGVLFGFIIGLIISLLRMSGIRIIEWLGTAYVEILRGTPMLVQLMIIHYGVALTLGVNFTPLQSGIITLSLNSSAYLAEIFRAGIQAVDRGQMEAARSLGMGRGKAMRHVILPQAFKSILPAIGNEFITIIKESSIISTIGMVDIMYQAQVIKNITYEGLSPFVIAAAIYFVMTFSLSKLLGLWERKLRASDHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7N4</accession>
    <name>E3E7N4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">phoR5</name>
        <name evidence="12" type="ORF">PPSC2_13475</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371442.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01160"/>
    <dbReference type="EnsemblBacteria" id="ADO56839">
        <property type="protein sequence ID" value="ADO56839"/>
        <property type="gene ID" value="PPSC2_13475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2869"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_89_6_9"/>
    <dbReference type="OMA" id="WAITLQN"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="161"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="188"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="248"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="476" mass="53400" checksum="E171E0B83F87C6F6" modified="2011-01-11" version="1">MIKKGIRRQIVLHYFFVVFLALLLVEVIFMFALRSYYYDTIYKKIENRIQSVSEFASKFKEPEQSLQSYLLDTFSLPNTELQLLDEQGNVIDNSTNFAADLSVQTSDVTQALAGDTGKWIGKQPSTGQQVMAVSQKLDNIVGDQVYIIRYTTSLELVNDKLFIITLFSVGIMAAVLIIVFVVSTGLANSIVRPINNIRDVSAQMAQGRFDARIKGDYRYELGELASTLNYMAQEIVRTNQIKDDFISSISHELRTPLTSIKGWSETLNSGGYDPEETKIGMQIISKETDRLIGLVEEILDFSKLEQNAMKLVMGTVDLRELLQEIMLNVWAKAEMKQIKLQLDSEETAYLVHGDGNRLKQVFLNIVDNAIKFSHESSIIYLSLQRVKGNIEISVQDTGIGISEENLARVRDRFFQVDHQNGGTGLGLAISQQFVERHHGQMLIRSELGAGTTITVSLPALQAEPSVEPPQLSEGQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7P4</accession>
    <name>E3E7P4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Dihydrofolate reductase</fullName>
            <ecNumber evidence="3 6">1.5.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dfrA</name>
        <name evidence="9" type="ORF">PPSC2_13520</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>(6S)-5,6,7,8-tetrahydrofolate + NADP(+) = 7,8-dihydrofolate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:15009"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57451"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 5,6,7,8-tetrahydrofolate from 7,8-dihydrofolate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6 7">Belongs to the dihydrofolate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.3" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371452.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01205"/>
    <dbReference type="EnsemblBacteria" id="ADO56849">
        <property type="protein sequence ID" value="ADO56849"/>
        <property type="gene ID" value="PPSC2_13520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2878"/>
    <dbReference type="eggNOG" id="COG0262">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043966_5_2_9"/>
    <dbReference type="OMA" id="EECFVIG"/>
    <dbReference type="OrthoDB" id="1920912at2"/>
    <dbReference type="UniPathway" id="UPA00077">
        <property type="reaction ID" value="UER00158"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004146">
        <property type="term" value="F:dihydrofolate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006545">
        <property type="term" value="P:glycine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00209">
        <property type="entry name" value="DHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012259">
        <property type="entry name" value="DHFR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024072">
        <property type="entry name" value="DHFR-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017925">
        <property type="entry name" value="DHFR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001796">
        <property type="entry name" value="DHFR_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48069">
        <property type="entry name" value="PTHR48069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00186">
        <property type="entry name" value="DHFR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000194">
        <property type="entry name" value="DHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53597">
        <property type="entry name" value="SSF53597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00075">
        <property type="entry name" value="DHFR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51330">
        <property type="entry name" value="DHFR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0521">NADP</keyword>
    <keyword evidence="6" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHFR" evidence="8">
        <location>
            <begin position="2"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18751" checksum="304435D8883B6AEA" modified="2011-01-11" version="1">MSISMIWAMAQNGVIGRDNSLPWRLPRDMAFFKEQTINKTVLMGRKTWESFGGKSLPNRRNVVLTRDERYQAEGAEVIHTLEEGLQLAQKEELMVIGGAEIYSLFWPHADRLIVTRIEETFEGDTTFPELDWSGWTIVSETPGIKDDKNLYDYRFVVYERTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Q9</accession>
    <name>E3E7Q9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tenI</name>
        <name evidence="2" type="ORF">PPSC2_13595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56864.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599813.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01280"/>
    <dbReference type="EnsemblBacteria" id="ADO56864">
        <property type="protein sequence ID" value="ADO56864"/>
        <property type="gene ID" value="PPSC2_13595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2893"/>
    <dbReference type="eggNOG" id="COG0352">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018272_3_4_9"/>
    <dbReference type="OrthoDB" id="1558094at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00564">
        <property type="entry name" value="TMP_TenI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036206">
        <property type="entry name" value="ThiamineP_synth_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022998">
        <property type="entry name" value="ThiamineP_synth_TenI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02581">
        <property type="entry name" value="TMP-TENI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51391">
        <property type="entry name" value="SSF51391"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TMP-TENI" evidence="1">
        <location>
            <begin position="11"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56864.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="21038" checksum="E1F9E4768363CEE5" modified="2015-05-27" version="2">MESVSCVNVPQVAAAICPYIHYVHARSKQKGASALLSLTRSMIKQEVPLRQIVVNDRVDVALLTSAGAVQLPANGLSVVDAKSLLSEGTRCGVSVHSLEEVQTAEQAGADYVLFGHVYETHCKAGLVPRGIAQLERICRLSDIPVIALGGIQPHHVPELYHAGASGIAVMSGIWEAKSPVAAAMEYRRMVDLVVHDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R8</accession>
    <name>E3E7R8_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371551.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01640"/>
    <dbReference type="EnsemblBacteria" id="ADO56951">
        <property type="protein sequence ID" value="ADO56951"/>
        <property type="gene ID" value="PPSC2_13985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2987"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037320_0_0_9"/>
    <dbReference type="OMA" id="FEYRTLP"/>
    <dbReference type="OrthoDB" id="1551280at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025681">
        <property type="entry name" value="COOH-NH2_lig"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14395">
        <property type="entry name" value="COOH-NH2_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="411" mass="47058" checksum="0EDCDBE86F6430C2" modified="2011-01-11" version="1">MMRQPGQALRRFRQMTDDEKMRRLERSGISVRWLDESTADFAIGYAVQIHQLRVLEIRRRALEGSTKVSTYDRSELDYQSPLYVRMERLAVRALYTLGLDSGEVVLTPLGERNCQVRHVLAQPWLNDRRLATLYEAAAREEDAPGEELSAERGRARLLIGMDPEFVLVRMPEERVVPASRYLGRLGVAGCDAVTRRGRTLYPVAELRPAPSEDPARLLRHLRQAFAIAARQIDDHTLIWQAGGMPQPGFPLGGHLHFSGVPLNGALLRALDNYLALPLALLEDKRSARRRPHYGNLGDFRRQSYGGFEYRTLPSFLISPQLAKGVIGMAFLIASQYSRLQRRPLGEEEAHRAFYEGNQVVLREYMEPLILDMISLEIFSQYEAYIAPLLDSLRKGKQWDETRDLRPYWKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7T8</accession>
    <name>E3E7T8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hemolysin D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yhbJ</name>
        <name evidence="1" type="ORF">PPSC2_14085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371571.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01740"/>
    <dbReference type="EnsemblBacteria" id="ADO56971">
        <property type="protein sequence ID" value="ADO56971"/>
        <property type="gene ID" value="PPSC2_14085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3007"/>
    <dbReference type="eggNOG" id="COG1566">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018816_11_0_9"/>
    <dbReference type="OMA" id="IGYYYWY"/>
    <dbReference type="OrthoDB" id="1680841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="217" mass="23618" checksum="9D3E0F07C6F899F2" modified="2011-01-11" version="1">MSKKTVLPILIVLLILSGGAIGYYYWYQATHFVKSDDARIQADQYKVMPQISGEISHIDVEEGDVLQRNEPIAEQDVSGLDASMISKSVLRAPINGTVIKIYSKEHEIGTPGSAVATMVDMNNLYVSTNIEETDINRIKPGQLVDITLDAAGDQVIQGKVRKVGEASNAVFSLVPAVNTSGNFNKVTQRVPVEIAVNKPKDMKLIPGTNVEVKIHTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7V3</accession>
    <name>E3E7V3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histone acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cML1</name>
        <name evidence="2" type="ORF">PPSC2_14160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371586.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3025"/>
    <dbReference type="EnsemblBacteria" id="ADO56986">
        <property type="protein sequence ID" value="ADO56986"/>
        <property type="gene ID" value="PPSC2_14160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3022"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_34_4_9"/>
    <dbReference type="OMA" id="RIRAHQF"/>
    <dbReference type="OrthoDB" id="2055010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="10"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="153" mass="16777" checksum="20975480B250511A" modified="2011-01-11" version="1">MSNSVMIPVLTIRSVELGDCEAVTGLLREVGYPMTCGVMKEVMGTAQEDSQANMMVAEMDGCVVGVIGMHTAQSLAYPDPAVQITMLVVSGEYRGEGIGKRLVACGEEWGRAQGCYHLFITGANNRIKQVEARAFYNRIGFEKQGYRFSKKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7V5</accession>
    <name>E3E7V5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yknV</name>
        <name evidence="10" type="ORF">PPSC2_14170</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371588.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01825"/>
    <dbReference type="EnsemblBacteria" id="ADO56988">
        <property type="protein sequence ID" value="ADO56988"/>
        <property type="gene ID" value="PPSC2_14170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3024"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_4_9"/>
    <dbReference type="OMA" id="RSWQTVR"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="92"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="198"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="279"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="53"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="373"/>
            <end position="607"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="406"/>
            <end position="413"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="612" mass="69184" checksum="6B49AFD3DF7F71E9" modified="2011-01-11" version="1">MNIPVEKAKPLKKPTNERFVYQDDEVIDKPFNWEEFKRLLAYMKPYARQILPILLVMMILGTITKLTVPYLISLAIDKAIAPAWPALPSVKLLLLITGAVLLLYLIQWAASTYRIKFTNIIGQRVIYDLREDLFKHIQKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGAVNVLIDCVQLFGIIVILLLINWKLGLAVIVTVPIMFLISTKLRVRIRRAWQEVRMKNSRINSHLNESIQGIRVTQAYTQEQENMAYFDDMNSSSKKSWDKASAMNQVFGPLIDITGGLGTLVLFWFGAHLIQTDQLTVGLLVAFANYVGNFWEPINRLGQMYNQLLVAMASSERIFEFMDEQPNIANKPGAKALPPIRGEIQFEKVIFEYEKGRQALKGINLSVEAGQSIALVGHTGSGKSTIINLLSRFYDITSGRLTIDGYDVRDVTVESLRSQISIVLQDTFIFSGTIRDNIRFGRLDATDEEIEAAAKAVNAHEFIVHLPDGYETEVEERGGMLSMGQRQLLSFARALLANPRILILDEATASIDTETELKIQEALQVLLEGRTSFMVAHRLSTIRNADHIVVLDHGEIQESGNHEQLMKKHGIYRGLVEAQFRFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E813</accession>
    <name>E3E813_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Segregation and condensation protein B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">scpB</name>
        <name evidence="5" type="ORF">PPSC2_14820</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Homodimerization may be required to stabilize the binding of ScpA to the Smc head domains. Component of a cohesin-like complex composed of ScpA, ScpB and the Smc homodimer, in which ScpA and ScpB bind to the head domain of Smc. The presence of the three proteins is required for the association of the complex with DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="4">Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the ScpB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371722.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02455"/>
    <dbReference type="EnsemblBacteria" id="ADO57126">
        <property type="protein sequence ID" value="ADO57126"/>
        <property type="gene ID" value="PPSC2_14820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3163"/>
    <dbReference type="eggNOG" id="COG1386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045647_5_3_9"/>
    <dbReference type="OMA" id="DGWRFYT"/>
    <dbReference type="OrthoDB" id="1771906at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051304">
        <property type="term" value="P:chromosome separation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01804">
        <property type="entry name" value="ScpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005234">
        <property type="entry name" value="ScpB_csome_segregation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34298">
        <property type="entry name" value="PTHR34298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04079">
        <property type="entry name" value="SMC_ScpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019345">
        <property type="entry name" value="ScpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00281">
        <property type="entry name" value="TIGR00281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 4" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 4" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="202" mass="22747" checksum="98AA7A875FBBE54B" modified="2011-01-11" version="1">MDYLKLKSIIEGLLFLAGEEGLSTKQIADIVEQQQELVEKCLEDMKQDMEQGGRGLQLVRIAGHYQLATLSEHAPYFEKLAYSPARASLSQAALETLAIVAYRQPITRVEIEEIRGVKSERAIHTLVNKELIEEKGRAEAIGRPILYGTTKSFLDYFGLGSLEDLPQPEQFEDSDNLEEETQLLFERLESSQPAENDSDLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E820</accession>
    <name>E3E820_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ferredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">porG</name>
        <name evidence="6" type="ORF">PPSC2_14855</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371729.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02490"/>
    <dbReference type="EnsemblBacteria" id="ADO57133">
        <property type="protein sequence ID" value="ADO57133"/>
        <property type="gene ID" value="PPSC2_14855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3170"/>
    <dbReference type="eggNOG" id="COG1014">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1144">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060916_0_0_9"/>
    <dbReference type="OMA" id="DYQYCKG"/>
    <dbReference type="OrthoDB" id="1619561at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016625">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.920.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011894">
        <property type="entry name" value="PorC_KorC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019752">
        <property type="entry name" value="Pyrv/ketoisovalerate_OxRed_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002869">
        <property type="entry name" value="Pyrv_flavodox_OxRed_cen"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12838">
        <property type="entry name" value="Fer4_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01558">
        <property type="entry name" value="POR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53323">
        <property type="entry name" value="SSF53323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02175">
        <property type="entry name" value="PorC_KorC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="247"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="285"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="337" mass="37319" checksum="1957F7826FC57AAE" modified="2011-01-11" version="1">MSILTRTNRLGFFEIRLESIGGLGANLAGKMLAETGVLGLGLNASNFSSYGSEKKGSPVKSFVRFCEPEVDIRDHSPIEQPHVVGIFHETLYKTVNVISGLPADGIVVVNSTRPAEEIRADLGLVSGTLAVVDAMGIALEERTKLNTSMLGALFRVCDFLDPEAMRSVIRSTFEKKNPQLVEPNLRTFNRGFEEMQLHVYPVTADAQDRVFERPQPLLGYETQLLGGVIATQGNSMTKDVSGSRQGYVPEYEADKCTHCAKCDSICPDYCFVWEEQADKRGRMMPFLQGIDYQYCKGCLKCVDICPSGALSSRREQWGWAEQNRVAHQFPVYEGGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E836</accession>
    <name>E3E836_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fur family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fur1</name>
        <name evidence="3" type="ORF">PPSC2_14930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Fur family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371742.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02565"/>
    <dbReference type="EnsemblBacteria" id="ADO57149">
        <property type="protein sequence ID" value="ADO57149"/>
        <property type="gene ID" value="PPSC2_14930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3185"/>
    <dbReference type="eggNOG" id="COG0735">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096072_3_1_9"/>
    <dbReference type="OMA" id="HDHVILT"/>
    <dbReference type="OrthoDB" id="1630127at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07153">
        <property type="entry name" value="Fur_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002481">
        <property type="entry name" value="FUR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043135">
        <property type="entry name" value="Fur_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33202">
        <property type="entry name" value="PTHR33202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01475">
        <property type="entry name" value="FUR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="19029" checksum="921F6A15F7DFE71C" modified="2011-01-11" version="1">MEARIEKIKQQLQSQGYKLTPQREATVRVLLENEDDHLSAEDVFMLVKEKAPEIGLATVYRTLELLSELHVVEKINFGDGVARYDLRGDTAKHHHHHLICVQCGSVDEILEDWLGPLEERLEREYNFTVVDHRLDFHGICYRCKAKNDTTAQKSSGKTKKNKSQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E845</accession>
    <name>E3E845_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 9">2-oxoisovalerate dehydrogenase subunit alpha</fullName>
            <ecNumber evidence="4 9">1.2.4.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7 9">Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">bckE1</name>
        <name evidence="11" type="ORF">PPSC2_14970</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 9">The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] + 3-methyl-2-oxobutanoate + H(+) = (R)-N(6)-(S(8)-2-methylpropanoyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] + CO2</text>
            <dbReference type="Rhea" id="RHEA:13457"/>
            <dbReference type="Rhea" id="RHEA-COMP:10488"/>
            <dbReference type="Rhea" id="RHEA-COMP:10489"/>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83142"/>
            <dbReference type="EC" id="1.2.4.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the BCKDHA family.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.4" evidence="4 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371751.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02605"/>
    <dbReference type="EnsemblBacteria" id="ADO57158">
        <property type="protein sequence ID" value="ADO57158"/>
        <property type="gene ID" value="PPSC2_14970"/>
    </dbReference>
    <dbReference type="GeneID" id="66576987"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3195"/>
    <dbReference type="eggNOG" id="COG1071">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029393_1_0_9"/>
    <dbReference type="OMA" id="LQYWGGD"/>
    <dbReference type="OrthoDB" id="1248201at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003863">
        <property type="term" value="F:3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009083">
        <property type="term" value="P:branched-chain amino acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034616">
        <property type="entry name" value="BCKDH_E1-a"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43380:SF1">
        <property type="entry name" value="PTHR43380:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="E1_dh" evidence="10">
        <location>
            <begin position="27"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00031050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="342" mass="37669" checksum="200C8AD75211C1A2" modified="2011-01-11" version="1">MSSKGAVDAGFRHEQLGLTHGQVIDMYRYMLLARRFDERNMLLQRAGKINFHVSGIGQEAAQVGAAFALDREKDYFLPYYRDYGFVLAVGMTPRELMLSAFAKADDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQVPHAVGVALAAKMQKKDFVSFVTFGEGSSNQGDFHEGCNFAGVQKLPVIIMCENNQYAISVPIHKQLAGKVSDRALGYGFPGIRVDGNDALAVYAAVKEARERAVRGEGPTLIEAMMYRLSPHSTSDNDLAYRTKEEVDENWAKDGVARMKSYLIECGIWDEAKDADLSAELLLEVKEAIEYADNAPFPKPEDTLLHVYADSDGEGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E875</accession>
    <name>E3E875_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">pacL</name>
        <name evidence="12" type="ORF">PPSC2_15490</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57267.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014600034.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03140"/>
    <dbReference type="EnsemblBacteria" id="ADO57267">
        <property type="protein sequence ID" value="ADO57267"/>
        <property type="gene ID" value="PPSC2_15490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3309"/>
    <dbReference type="eggNOG" id="COG0474">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002360_1_0_9"/>
    <dbReference type="OrthoDB" id="178322at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005388">
        <property type="term" value="F:P-type calcium transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006068">
        <property type="entry name" value="ATPase_P-typ_cation-transptr_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004014">
        <property type="entry name" value="ATPase_P-typ_cation-transptr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005782">
        <property type="entry name" value="P-type_ATPase_IIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00689">
        <property type="entry name" value="Cation_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00690">
        <property type="entry name" value="Cation_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00120">
        <property type="entry name" value="HATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00831">
        <property type="entry name" value="Cation_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="SSF81660"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01116">
        <property type="entry name" value="ATPase-IIA1_Ca"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="51"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="80"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="247"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="273"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="710"/>
            <end position="731"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="737"/>
            <end position="759"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="791"/>
            <end position="809"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="815"/>
            <end position="833"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="854"/>
            <end position="874"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="889"/>
            <end position="909"/>
        </location>
    </feature>
    <feature type="domain" description="Cation_ATPase_N" evidence="11">
        <location>
            <begin position="5"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57267.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="932" mass="101639" checksum="1C012EFA5EE4E145" modified="2015-05-27" version="2">MEQAHWHQLSNEQLSTSLEVDPKQGLSEEQIAERRERTGWNELSEGKRVSAVLLLLNQFKDFMMLVLMGATLISGLLGEYLDAITIIAIVVLNGILGFVQEFRAERSLRALRQLSAPTAKVLRGGKRIHVQARELVVGDIVLLESGDRIPADVRWLSTNGCDVEESALTGESVPVSKHCRPIHAAEVPLGDQKNIGFMGTMMTRGTAQGVVIRTGMTTEMGKIADLIENTESQETPLQHRLEQLGKILIIVALALTVLVVVAGILHGQPAMNMFLAGVSLAVAAIPEGLPAIVTIALALGVQRMIKRKAIVRKLPSVETLGCASVICSDKTGTLTQNKMTVTKLWLDGRFWGVTGEGYDPHGHIMDRDLPADLKNGQSLRRLLQASVLCNNAEIVQADIDELRSKKKTKEPTPSAVWELKGDPTEGALVTLAAKGGVTRQGLYELYTREREFPFDSDRKRMSVLVRHQGGHIVFAKGAPDVLLGQCSYILWEGNVVPLTGTLRQKVLAANEGMASEALRVLGVAYRDIRSHERVSTAEEAEEQLVFIGLTGMIDPPRREVREAIGKCRRAGIRTVMITGDHGTTAEAIAQQLGILQRGSHVLTGQQLSLMDDAALDNVVDTVSVYARVSPEHKLRIVKSLQRRGHVVAMTGDGVNDAPAIKASDIGIAMGITGTDVTKEAAALVLSDDNFSTIVAAIEEGRNIYENIRKFIRYLLASNVGEILTMFFAMMAGLPLPLLPIQILWVNLVTDGLPAMALGVDQPEKDLMEHKPRGAKENIFARRLGWKIISRGLLIGLCTLAAFWLTLRIAPNDAGQLIKAQSVAFATLVLAQLIHVFDCRSSRSVFHRNPFQNSYLVLAVLSSIVLMLVVMYVPVLQPIFKTVPLGLREWALSIVAAGIPTFLMGAGSVWGGRRNRRHGGNTHFSAGRTKFSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8E5</accession>
    <name>E3E8E5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation protein, YlmC/YmxH family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylmC</name>
        <name evidence="2" type="ORF">PPSC2_16560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372079.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03895"/>
    <dbReference type="EnsemblBacteria" id="ADO57494">
        <property type="protein sequence ID" value="ADO57494"/>
        <property type="gene ID" value="PPSC2_16560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3535"/>
    <dbReference type="eggNOG" id="COG1873">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_161336_0_0_9"/>
    <dbReference type="OMA" id="DYVIPWE"/>
    <dbReference type="OrthoDB" id="1995157at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027275">
        <property type="entry name" value="PRC-brl_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011033">
        <property type="entry name" value="PRC_barrel-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014238">
        <property type="entry name" value="Spore_YlmC/YmxH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40061">
        <property type="entry name" value="PTHR40061"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05239">
        <property type="entry name" value="PRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50346">
        <property type="entry name" value="SSF50346"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02888">
        <property type="entry name" value="spore_YlmC_YmxH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRC" evidence="1">
        <location>
            <begin position="11"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="12820" checksum="B0736957DBF36389" modified="2011-01-11" version="1">MNAPETSVRAMKISEFQTKDVINIVDGRRLGQISDLEIDVRQGKIEAIVVPGSSRFMGWFGGGSELVIPWRNIVKIGSDVVLVRLEGLHEPPDEREEKLYIERQERNDRRVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8R6</accession>
    <name>E3E8R6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CbrC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cbrC</name>
        <name evidence="2" type="ORF">PPSC2_17870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0167 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372355.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3821"/>
    <dbReference type="EnsemblBacteria" id="ADO57775">
        <property type="protein sequence ID" value="ADO57775"/>
        <property type="gene ID" value="PPSC2_17870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3818"/>
    <dbReference type="eggNOG" id="COG3196">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_167635_0_0_9"/>
    <dbReference type="OrthoDB" id="1896586at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005363">
        <property type="entry name" value="UPF0167"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03691">
        <property type="entry name" value="UPF0167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="13726" checksum="9D3C5A02C1335B8F" modified="2011-01-11" version="1">MLQGTFHDPACCAQLEEPKLDELLHRTPGYEAWQTAAWLDHCDDYCVFIDFVGWKELVSRGIENDVNLMFMPILALYNEKEAKSRIRESMERDGSFRGYLFQCRHCKEYLLYADYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8V3</accession>
    <name>E3E8V3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YrvM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yrvM</name>
        <name evidence="2" type="ORF">PPSC2_19110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372626.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06310"/>
    <dbReference type="EnsemblBacteria" id="ADO58051">
        <property type="protein sequence ID" value="ADO58051"/>
        <property type="gene ID" value="PPSC2_19110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4094"/>
    <dbReference type="eggNOG" id="COG1179">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013325_4_1_9"/>
    <dbReference type="OMA" id="DMDDICV"/>
    <dbReference type="OrthoDB" id="1543144at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008641">
        <property type="term" value="F:ubiquitin-like modifier activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045886">
        <property type="entry name" value="ThiF/MoeB/HesA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000594">
        <property type="entry name" value="ThiF_NAD_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035985">
        <property type="entry name" value="Ubiquitin-activating_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43267">
        <property type="entry name" value="PTHR43267"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00899">
        <property type="entry name" value="ThiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69572">
        <property type="entry name" value="SSF69572"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ThiF" evidence="1">
        <location>
            <begin position="11"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="27431" checksum="3213B6607C0D000C" modified="2011-01-11" version="1">MLHQFSRTELAIGTEGLEVMKNSTVAVLGIGGVGSIAVEALARTGVGRIILIDKDVVDITNINRQIHALTTTVGQKKADLMVERVKLINPECEAIALNMFYTEETYEELFKYDLDYVLDASDTIIYKVHLIKECLKRGIPMISSMGAANKMDPSRFQVADISKTRMDPIARVIRTKLRKEGITKGVKVVFSDEEPMKPREEITKKIVPANAPEIRKAKQPPASNAFVPPVAGLIMVSVAVKDLLERAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E957</accession>
    <name>E3E957_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373797.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12420"/>
    <dbReference type="EnsemblBacteria" id="ADO59264">
        <property type="protein sequence ID" value="ADO59264"/>
        <property type="gene ID" value="PPSC2_24925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5282"/>
    <dbReference type="eggNOG" id="COG1896">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114091_0_0_9"/>
    <dbReference type="OMA" id="NQSHFFA"/>
    <dbReference type="OrthoDB" id="1508841at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="209" mass="24451" checksum="0D3C8ABA7A420D98" modified="2011-01-11" version="1">MGIHTYFRSLNELERIIRCPGKFKFEEHSVSAHSWKVVQYAKTLADIEERNGVCIDWKKLYEITSSHDYGEIFIGDIKTPVKHSSKELRLLIQQVEEGMIEYFIEENIPEDFKAIFRKQLREGKDDSVEGLILEVADKMDQVYEAFAELQRGNTEKEFIVMYRNALVKIKNIQLHCVEYFLENILPDMVKEETPSSIDIKKITEEALAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E964</accession>
    <name>E3E964_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57337.1"/>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_15820"/>
    </dbReference>
    <dbReference type="GeneID" id="66576809"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3378"/>
    <dbReference type="eggNOG" id="ENOG5034183">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2316294_0_0_9"/>
    <dbReference type="OMA" id="YVEHALH"/>
    <dbReference type="OrthoDB" id="1904134at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11619" checksum="E67901EAA0E12E49" modified="2011-01-11" version="1">MALLNRVKELKLQLPNEHHSISQYVEHALHSIDSFVEQHRQFVAAQALYGEKINGTEERLFRDTIAEIKAQLVATLEKTVEDFAHKGDKHWKNHYQDGVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E965</accession>
    <name>E3E965_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Tenascin-N</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tNN</name>
        <name evidence="3" type="ORF">PPSC2_15825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03520"/>
    <dbReference type="EnsemblBacteria" id="ADO57338">
        <property type="protein sequence ID" value="ADO57338"/>
        <property type="gene ID" value="PPSC2_15825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3379"/>
    <dbReference type="eggNOG" id="COG5492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_375000_0_0_9"/>
    <dbReference type="OMA" id="ITVKSPY"/>
    <dbReference type="OrthoDB" id="1007184at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003343">
        <property type="entry name" value="Big_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008964">
        <property type="entry name" value="Invasin/intimin_cell_adhesion"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02368">
        <property type="entry name" value="Big_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00635">
        <property type="entry name" value="BID_2"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49373">
        <property type="entry name" value="SSF49373"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168081" evidence="1">
        <location>
            <begin position="33"/>
            <end position="628"/>
        </location>
    </feature>
    <feature type="domain" description="BIG2" evidence="2">
        <location>
            <begin position="44"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="BIG2" evidence="2">
        <location>
            <begin position="121"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="BIG2" evidence="2">
        <location>
            <begin position="206"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="BIG2" evidence="2">
        <location>
            <begin position="292"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="BIG2" evidence="2">
        <location>
            <begin position="459"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="domain" description="BIG2" evidence="2">
        <location>
            <begin position="545"/>
            <end position="625"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="628" mass="65562" checksum="4B403C611628C597" modified="2011-01-11" version="1">MERMKRMSKRSTFLLALLMFVFAAWPAGLIRAEEKTTSTVQWDSQNPTTVNLGGSPAQLKVWSVTQTGKTDVTERAEWISGDSSILKVEKGLITPVSKGQIKIVATYDQKTVSTTITVKSPYSKLQFNPTGPLNLTIGGESKQLTAQGVLSGGGTENVSGVEWTSTNEAVATVENGLVRPLAKGVTYIKATKDGLNAQLIVYVRSSSQALVLSASGSKSVYLGSSPFQVTATDVNLTGGKTDVTSTAEWTSSNSLVATVEQGKITPMDVGNSTITASYHGLSKTLKINVLPTVEKLVSSKASLTLETGSKTSLPSISAYLVNGAKKAVQSDVKWSLSSESAVKIVNGKLVAVNPGSATLTATVGALKLDIPVTVQYKVLKLTASEKKYVLVAGQETSIPTVKAHMAGGGVLDVTNQVSWVATTAAVTVGNGKVKAVSGGNSGIKAMYMNKYVKVPVIVEGAISTLTPSFSNAEMNLKGSKSIKVVGNYTDGKKVTLSSKVKWTTSNASVVVVKGSSIKAVGIGTATITGTYQDKSFNVEIKVTPKLLKLVLSNKNLKLPKGSSQVLSVSAVYDSGATANVTNSAVWTSSKPSIVQVTAGQVKALDSGSSSIKVVYGGKKVTTSAKVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E968</accession>
    <name>E3E968_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Amylopullulanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">amyB1</name>
        <name evidence="3" type="ORF">PPSC2_15840</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371927.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03535"/>
    <dbReference type="EnsemblBacteria" id="ADO57341">
        <property type="protein sequence ID" value="ADO57341"/>
        <property type="gene ID" value="PPSC2_15840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3382"/>
    <dbReference type="eggNOG" id="COG5492">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072307_0_0_9"/>
    <dbReference type="OMA" id="PMIKIAP"/>
    <dbReference type="OrthoDB" id="1593950at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001119">
        <property type="entry name" value="SLH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00395">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51272">
        <property type="entry name" value="SLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168659" evidence="1">
        <location>
            <begin position="28"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="SLH" evidence="2">
        <location>
            <begin position="158"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="23746" checksum="9AAFF2AE7EEFBED0" modified="2011-01-11" version="1">MRMRKNAIAALATVALLSFSIGGHLSAADSQFRDLDHVNGKEKILSLKERGLLKGASDMQFLPSSKVTAAQGIQLISGGLQLSVAAIDLNQAPQASGLFTQVKDTAWYAEAFINAYYNGVDIPKDINPAKALTKEEFTHMLIQGMEKAGALPMIKIAPANITDDSELEPSYQGSIQRSLVYKVNVLDGKGNFHPKSAITRAEAAVMLYNALEYLNAHPKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9U7</accession>
    <name>E3E9U7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EndoU_bacteria domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_18380</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372466.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3935"/>
    <dbReference type="EnsemblBacteria" id="ADO57887">
        <property type="protein sequence ID" value="ADO57887"/>
        <property type="gene ID" value="PPSC2_18380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3932"/>
    <dbReference type="eggNOG" id="COG3501">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_312530_0_0_9"/>
    <dbReference type="OrthoDB" id="1880900at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029501">
        <property type="entry name" value="EndoU_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14436">
        <property type="entry name" value="EndoU_bacteria"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EndoU_bacteria" evidence="2">
        <location>
            <begin position="848"/>
            <end position="964"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="370"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="689"/>
            <end position="711"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="780"/>
            <end position="823"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="965" mass="107502" checksum="8F93B0ED9C3E7928" modified="2011-01-11" version="1">MNIVAKDRFTYQHLHVTWPYGKLRLRNVHMSHELGEHARLKITGVLEGNQADTIITKASSDDEVELWYSDAKDQKHPLFIGQLYCVDVEHTHQEIVVTLDVISHSFKLDTQFKNRSFQHINQKFVEIVDAVLADYKGSDKIDEAFEKKATGQFIMQYQETDWTFLKRLASHVGALLVPNIVSHHAQIWIGIPQARQHIHLKEVPFSLQRKIAPYLDQEANGWRSANIGDYTRYTFEWDQMLQLGDEVERNHETYVITKREGQLIRGLMTWSYECALTGGLKVPKIYNRTIIGAAIEGKILEVSRNQVRLHLDMDDQQNPKDAQWFPYSAEGNQVWYLMPEKGAQVKLYFPSADEDDAMVIQSVRTKPSSVAVPSSHAAQGAVIESPAERHQRKTADPGVKSFANPQGKEISLGNSELSMSAQEGSLYISMNTQHGVSLNSTQRVQIQAAGSLSLSAGSILLQGTNGLHLNTTTDTLDLEQEVNSVSSEIQLKASLHQYYPEPILSDFEKQVAEKGIQGVMGARAKENVGATLKGEWDAGLEFAKGMWNSFVDIADLVTVPLAFRFILPEGILRRNETFEGIQHGLELGAEKGIKYVEVVKNSSSVGQGFKDVGKEVKKDANFIWDGITEPFVKKLDNFFPNPYTDTKQESYDAGYDSIKAAERAADIYTVLKGGAKLFKNLGKLGKEEVSLSKGAKETGEKNTGKGGAPGLFGDTAKAESALAKAGDGKFKTNAIRFPNNFESLGSYLQSVARKMNIRITKRSPIFATAGDHYRFHDSGHDIPHSKGSGAKISPERQKQIDALESGEYTGKSTKGTDEGARSTNVSIEKKKWLESLQNTENFKQGTKENGLNHIFDGEILKNGNANGFHYEGMPNSNGKIVGNIDPPNEFGVYQANIEINGVLKGPKSTFFPKEWTPQQVIDVVNEAFNNKEIIKNNKYIGKTSTGMEIEFILRNDKIISAYPVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9V6</accession>
    <name>E3E9V6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L21</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rplU</name>
        <name evidence="6" type="ORF">PPSC2_19360</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">This protein binds to 23S rRNA in the presence of protein L20.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit. Contacts protein L20.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the bacterial ribosomal protein bL21 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372663.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06560"/>
    <dbReference type="EnsemblBacteria" id="ADO58089">
        <property type="protein sequence ID" value="ADO58089"/>
        <property type="gene ID" value="PPSC2_19360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4131"/>
    <dbReference type="eggNOG" id="COG0261">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061463_3_2_9"/>
    <dbReference type="OMA" id="HRQEITR"/>
    <dbReference type="OrthoDB" id="1949059at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01363">
        <property type="entry name" value="Ribosomal_L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036164">
        <property type="entry name" value="L21-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028909">
        <property type="entry name" value="L21p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001787">
        <property type="entry name" value="Ribosomal_L21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018258">
        <property type="entry name" value="Ribosomal_L21_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21349">
        <property type="entry name" value="PTHR21349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00829">
        <property type="entry name" value="Ribosomal_L21p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141091">
        <property type="entry name" value="SSF141091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00061">
        <property type="entry name" value="L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01169">
        <property type="entry name" value="RIBOSOMAL_L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="11337" checksum="A170C2E45B50113B" modified="2011-01-11" version="1">MYAIIETGGKQYKVQEGDVLFIEKLEANDGETVTFDRVLAVSGDNGLTAGTPLLSGASVTAKVEKHGQGQKVVVYKYKPKKNYHVKQGHRQPYTKVTIEKIQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9W8</accession>
    <name>E3E9W8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372674.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06615"/>
    <dbReference type="EnsemblBacteria" id="ADO58102">
        <property type="protein sequence ID" value="ADO58102"/>
        <property type="gene ID" value="PPSC2_19415"/>
    </dbReference>
    <dbReference type="GeneID" id="66576185"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4142"/>
    <dbReference type="eggNOG" id="ENOG503317J">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_166657_0_0_9"/>
    <dbReference type="OMA" id="WIAKALQ"/>
    <dbReference type="OrthoDB" id="2033474at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025470">
        <property type="entry name" value="DUF4321"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14209">
        <property type="entry name" value="DUF4321"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9104" checksum="AD1A38A3172118D1" modified="2011-01-11" version="1">MKKNVGMLILFLLLGWLLGAWIAKALQSVKVLSFLTHPTTISWSPRADLDIISYNITINFELSLLSLIGIIAAFWLYRRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA49</accession>
    <name>E3EA49_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Lipoprotein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">metQ5</name>
        <name evidence="7" type="ORF">PPSC2_20505</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the nlpA lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372912.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07760"/>
    <dbReference type="EnsemblBacteria" id="ADO58341">
        <property type="protein sequence ID" value="ADO58341"/>
        <property type="gene ID" value="PPSC2_20505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4373"/>
    <dbReference type="eggNOG" id="COG1464">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067080_0_0_9"/>
    <dbReference type="OMA" id="HIEPMGV"/>
    <dbReference type="OrthoDB" id="1230456at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004872">
        <property type="entry name" value="Lipoprotein_NlpA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30429">
        <property type="entry name" value="PTHR30429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03180">
        <property type="entry name" value="Lipoprotein_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002854">
        <property type="entry name" value="MetQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00363">
        <property type="entry name" value="TIGR00363"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168282" description="Lipoprotein" evidence="6">
        <location>
            <begin position="33"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="lipid moiety-binding region" description="S-diacylglycerol cysteine" evidence="5">
        <location>
            <position position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR002854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR002854-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="30939" checksum="3E27D94734AF4B7F" modified="2011-01-11" version="1">MKKWVLAVLSLTLIAVLAACGTKSTTSDTNNAAENTGGSPREVELKVGASPVPHAEILEAIKPQLEKEGVRLQVVQFNDYVQPNVQLFDKQLDANFYQHVPYLNVMNKERKMDLVSIGAVHLEPFGIYSQKYKKLDELPDGATVAIPNDATNGGRALLLLEKQGLIKLKDASNIEATVKDITENKKNLKFKELEAAMLPRQLPEVDIALINTNYALEAKLNPTKDALALEDKDSPYANVLVARPDNKDSEAIQKLFKALQSPETKKFIEDKYQGAIIPAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA88</accession>
    <name>E3EA88_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yurM9</name>
        <name evidence="7" type="ORF">PPSC2_20690</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58380.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324698.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07935"/>
    <dbReference type="EnsemblBacteria" id="ADO58380">
        <property type="protein sequence ID" value="ADO58380"/>
        <property type="gene ID" value="PPSC2_20690"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20690"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4413"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_1_9"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="140"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="72"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58380.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="31529" checksum="458093806E9B4694" modified="2015-05-27" version="2">MKKHGLRWSRVFLYTVLIVGSLFCMFPFYWLVRSSMMDLSQIFLIPPKWIPEPFVFENFLQPFEELSFGRYFVNTFIVVAGTLVGVLLSSTISAYSFARMRWKGRDKVFAVLLSSMMLPFAVTLIPSFIGWQALGMVNSYVPLVLPSFFGGGVFNIFLLRQFYMTLPRELDEAVFVDGGNHFTIFTRIILPLSRSAILVIGLFTFLNTWNDFMGPLVYLNDESKFTLAIGLQQFQGIYSAQWGVLMAASLIVVLPAIILFAIGQKYFMEGIALTGIKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAM7</accession>
    <name>E3EAM7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Flagellar motor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ytxE</name>
        <name evidence="8" type="ORF">PPSC2_22760</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MotB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373324.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10275"/>
    <dbReference type="EnsemblBacteria" id="ADO58785">
        <property type="protein sequence ID" value="ADO58785"/>
        <property type="gene ID" value="PPSC2_22760"/>
    </dbReference>
    <dbReference type="GeneID" id="66575508"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4819"/>
    <dbReference type="eggNOG" id="COG1360">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016890_0_0_9"/>
    <dbReference type="OMA" id="AFSEMDV"/>
    <dbReference type="OrthoDB" id="1619550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025713">
        <property type="entry name" value="MotB_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13677">
        <property type="entry name" value="MotB_plug"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0282">Flagellum</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="OmpA-like" evidence="7">
        <location>
            <begin position="144"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="72"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="72"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="30552" checksum="B767944A1E0ABAD3" modified="2011-01-11" version="1">MRARAKRRGRQGGGGDQRDRWMITYADLITLLLIFFVVMYAMSSLDAKKYDVVVQSLQDTFHKGDSILEQGSGITGTADRYTSKNPPATKQPASNKKEAGSTKLTEREQAFRKQEKELQNLMGVIQEYITDNKLQNQIFVSDQPRGIVITLNDRFLFDQGRAALKQGSANTLSKLASLFRDLKTPISIEGHTDNIPFTRSSNSSTYKDNWELSGARALSVLRFFIDREQLSPSGFQYAGYADTRPVGDNSTEAGRQKNRRVEITVLRQLQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT1</accession>
    <name>E3EAT1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore germination protein KC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yfkR3</name>
        <name evidence="4" type="ORF">PPSC2_23725</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373531.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11230"/>
    <dbReference type="EnsemblBacteria" id="ADO58995">
        <property type="protein sequence ID" value="ADO58995"/>
        <property type="gene ID" value="PPSC2_23725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5021"/>
    <dbReference type="eggNOG" id="ENOG502Z9N7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051140_0_2_9"/>
    <dbReference type="OMA" id="ARVPQNR"/>
    <dbReference type="OrthoDB" id="1421701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02887">
        <property type="entry name" value="spore_ger_x_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="405" mass="45443" checksum="AB71D89A1B1DA61D" modified="2011-01-11" version="1">MKPTSNTQQMRKAAVLCCLLLCSVLLGGCWDRREVNDVAFVMGTGLDKEGDQYRVTMQIALPGQLGSSGSTGGGGGTSGTKSYYLESKTGPSFRGASTEEQREVSRTLNYSHRRVLLLGETLAREGISKMMDVIARIPQNRLSSLVVITKGSAMEMLQADAPIEQYPAEMVRELNFSYMKKPRSVKLLMNSVLLEGIDPVVPVMSLVKNGPDSLKDKKTNIQVDGLAVFRQDRLTGVIDNHLSRFLLLGMEQAKETEIFIPPPKGRGYISVHLIENKVHIKPFIRGNEIRMTIHMNCNGNVKENETSFDISREENLKWLEQQTVEEIKRELGEAVKEIQQKYHSDVLGLGRAIITNHPDEWKRIKPQWEQLYPKVEVTIDPVVHIENIGAVTKPFGVKKEQIQNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBA7</accession>
    <name>E3EBA7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvmB3</name>
        <name evidence="2" type="ORF">PPSC2_20980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373008.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4490"/>
    <dbReference type="EnsemblBacteria" id="ADO58439">
        <property type="protein sequence ID" value="ADO58439"/>
        <property type="gene ID" value="PPSC2_20980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4474"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_11_2_9"/>
    <dbReference type="OMA" id="GQHEPIN"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="20565" checksum="C81C9FE3BC48C749" modified="2011-01-11" version="1">MEFQNHFKGHLYEQYIKMLHLNELYTEQEINSFRQQARKYQIDMLSNNITSVHVIDCIGDYEPINHTGIVEKMGLSKASITKISAKLLEMGFIMRSQLNSNRKEIYFSLTDKGRHVYHLHKELHKEKEERFYQFIESYSEVELQTIGKFMSDLVARAEEYSEGKFKINDDIKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBD2</accession>
    <name>E3EBD2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Purine nucleoside phosphorylase DeoD-type</fullName>
            <shortName evidence="4">PNP</shortName>
            <ecNumber evidence="4">2.4.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">deoD</name>
        <name evidence="6" type="synonym">deoD3</name>
        <name evidence="6" type="ORF">PPSC2_21840</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the reversible phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a purine 2'-deoxy-D-ribonucleoside + phosphate = 2-deoxy-alpha-D-ribose 1-phosphate + a purine nucleobase</text>
            <dbReference type="Rhea" id="RHEA:36431"/>
            <dbReference type="ChEBI" id="CHEBI:26386"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57259"/>
            <dbReference type="ChEBI" id="CHEBI:142361"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a purine D-ribonucleoside + phosphate = a purine nucleobase + alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:19805"/>
            <dbReference type="ChEBI" id="CHEBI:26386"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homohexamer; trimer of homodimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the PNP/UDP phosphorylase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.1" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373173.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08985"/>
    <dbReference type="EnsemblBacteria" id="ADO58606">
        <property type="protein sequence ID" value="ADO58606"/>
        <property type="gene ID" value="PPSC2_21840"/>
    </dbReference>
    <dbReference type="GeneID" id="66575699"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4646"/>
    <dbReference type="eggNOG" id="COG0813">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068457_2_0_9"/>
    <dbReference type="OMA" id="PQCLLCG"/>
    <dbReference type="OrthoDB" id="1028277at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004731">
        <property type="term" value="F:purine-nucleoside phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009164">
        <property type="term" value="P:nucleoside catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042278">
        <property type="term" value="P:purine nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd09006">
        <property type="entry name" value="PNP_EcPNPI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01627">
        <property type="entry name" value="Pur_nucleosid_phosp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004402">
        <property type="entry name" value="DeoD-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018016">
        <property type="entry name" value="Nucleoside_phosphorylase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43691:SF2">
        <property type="entry name" value="PTHR43691:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00107">
        <property type="entry name" value="deoD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01232">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PNP_UDP_1" evidence="5">
        <location>
            <begin position="16"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate binding" evidence="4">
        <location>
            <begin position="87"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Purine nucleoside binding" evidence="4">
        <location>
            <begin position="179"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Purine nucleoside binding" evidence="4">
        <location>
            <begin position="203"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="204"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="4"/>
        </location>
        <ligand>
            <name>a purine D-ribonucleoside</name>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="24"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalytic activity" evidence="4">
        <location>
            <position position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="25570" checksum="08EC9AA142F978C6" modified="2011-01-11" version="1">MSVHIGAKPGEIAETILLPGDPLRAKFIAETYLEDVTCYNEVRGMLGFTGTYQGKRLSVQGTGMGLPSISIYVNELISEYGVKNLFRVGTCGGMKEHVHVRDVILAQASCTDSGMNRHIFGGYDFSPIASFPLLKGAYDRGVAKGLNMHVGNVFSSDSFYRDDKSVVQKLMEYGVLGVEMETSALYTLAAKFGVNALTILTVSDHLLTGEETTAEERQTTFKEMMEVALDTAVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC67</accession>
    <name>E3EC67_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-362</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-362</name>
        <name evidence="1" type="ORF">PPSC2_01130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368853.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0223"/>
    <dbReference type="EnsemblBacteria" id="ADO54210">
        <property type="protein sequence ID" value="ADO54210"/>
        <property type="gene ID" value="PPSC2_01130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.214"/>
    <dbReference type="HOGENOM" id="CLU_642273_0_0_9"/>
    <dbReference type="OrthoDB" id="2224441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="50216" checksum="9C8BFC402A224210" modified="2011-01-11" version="1">MKYIHLMDEAQRLKILKKFKLPLGKPLQGYSQEEADELTEDDIFAFVYKQCEKYIPDRLIRLFENVDELASFKKGVKEHLIMNSYIVSNINILTGPEEKDTSNTRGIARIGKEIKRLGNELLPDMNNGNYVAHIVEEELVGVLQRYFDLEPYKRESSKAKGGFKDDVKVPYLVKPFIYFVTCINSIYKKLEKKEYSRELFGGISALFEEILKSYTEEQQIVSRYLFEREYSVRLINRINDNVELHGDQDIRELKKLFGFFAVLPNVDSRLEYLDVINKSLLNGSFTKSSSGKYGEHSYNEKIDNPSIWFDEVRLIILQFALVTLPLMELYHYELIYRYERSLTLTLRSEYDKQENIFETMKIVEGYKSTIDSDESYLLKNFVKQYPSKKRVIDSELAYDLVKRFHELDSNMDDFIAKIEQALLNTEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECE5</accession>
    <name>E3ECE5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore gernimation protein GerA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yndF1</name>
        <name evidence="4" type="ORF">PPSC2_01505</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368930.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14200"/>
    <dbReference type="EnsemblBacteria" id="ADO54288">
        <property type="protein sequence ID" value="ADO54288"/>
        <property type="gene ID" value="PPSC2_01505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.298"/>
    <dbReference type="eggNOG" id="ENOG502ZT3R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051140_0_2_9"/>
    <dbReference type="OMA" id="GYNGKIM"/>
    <dbReference type="OrthoDB" id="1421701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02887">
        <property type="entry name" value="spore_ger_x_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="384" mass="43777" checksum="0F6121626A211458" modified="2011-01-11" version="1">MISYGLLFRRTLWVQKCFAAWIACTLLTGCWDSREIDNLSIIQGVAIDTDQQDMLELTYQHLIAQKSRKNMYRNVTTFNKDSIQSASREQAKQVSRAPLYSFIRLILISDQAIQKRRIDQLLDTFTRSYKPSRKSLVMIVKDNAKDALNKMGKHQEIPSIDLEALAKNSNLNSKIPYRITLGEISTHISQGADFLIQCLETGGGNHFSGAALIRGKTKKFAYWLDEEDVIGINWMLGKTKGSIIRTESSKSNQSMVFEVEDVHTKLIPHLNGQDLSFTVRIKTDIKLNESTVNSEDFLKESFIQTAKQEAQDEIKQTVSQSLNTLQKEMRADVVGFGTKVKVNYPAYWDRVKENWQDTFSQIPIDVKAKVQIERTGAYSKEEGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECM5</accession>
    <name>E3ECM5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_04035</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369432.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16835"/>
    <dbReference type="EnsemblBacteria" id="ADO54797">
        <property type="protein sequence ID" value="ADO54797"/>
        <property type="gene ID" value="PPSC2_04035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.804"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_0_9"/>
    <dbReference type="OMA" id="ESHEPEH"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="3"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="413"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="519" mass="60179" checksum="97A47B8AEED01FAB" modified="2011-01-11" version="1">MYKVLLVDDERMILEGISQVVDWGKAGTRLVGTARNGIEAYDQIQASPPDFVISDISMPGLDGIGLVAKTTEHFPDVRFILLSGYKDFDYACRAMQYGVKHYLLKPCNERQIHDALTELGQEREEQEERKQFVNRMKLDFQRMLPHVKEHFLKEFISYKTYGSRDIAFYERLFGLELQDKQVRMLLLRVEESHEPEHLFALQNIAGDLMDHVLLSTTMQGQLLIVLESEDDTSRFMKQIEAVRTTFHRFYKLEVTVAVSESDSMQHSRGMYRETLHCMNHRFYTGEGSLITKEDLAAEDTREMADLELDEEKFGLLIKAGNREEVAQEVDRLFGILSRMKLEISVTRSYVLQLYAAMIRICPEEERAAFTSRMVVLAEQKTLACLKSFVQEAAERMTAIYYKSNVYRQSSTVDKMITIIEQNYRKSDLSLNGVAGQMLYMNSDYLGKIFKKVTGENFSHYVNRYRIERAAEHIRETGDVKVFELAEWFGFGGNAQYFSQVFKKWAGMTPSEYIKSYERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECR6</accession>
    <name>E3ECR6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">UTP--glucose-1-phosphate uridylyltransferase</fullName>
            <ecNumber evidence="3 4">2.7.7.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">UDP-glucose pyrophosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yngB</name>
        <name evidence="6" type="ORF">PPSC2_01835</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>alpha-D-glucose 1-phosphate + H(+) + UTP = diphosphate + UDP-alpha-D-glucose</text>
            <dbReference type="Rhea" id="RHEA:19889"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="2.7.7.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the UDPGP type 2 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.9" evidence="3 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369000.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14600"/>
    <dbReference type="EnsemblBacteria" id="ADO54360">
        <property type="protein sequence ID" value="ADO54360"/>
        <property type="gene ID" value="PPSC2_01835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.369"/>
    <dbReference type="eggNOG" id="COG1210">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029499_1_2_9"/>
    <dbReference type="OMA" id="LCAEHFI"/>
    <dbReference type="OrthoDB" id="1402673at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003983">
        <property type="term" value="F:UTP:glucose-1-phosphate uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006011">
        <property type="term" value="P:UDP-glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02541">
        <property type="entry name" value="UGPase_prokaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005771">
        <property type="entry name" value="GalU_uridylyltTrfase_bac/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43197">
        <property type="entry name" value="PTHR43197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01099">
        <property type="entry name" value="galU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="5">
        <location>
            <begin position="6"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="32220" checksum="FFEC72E35DFC2294" modified="2011-01-11" version="1">MRKITKAVIPAAGLGTRFLPATKALPKEMLPIVDKPAIQYIVEEAIKSGIESIIIVTGRNKKAIEDHFDKSVELEQVLESKGKYDLLREVQSIGGKAVIHYIRQKEPLGLGHAVRCARQFIGDEPFAVLLGDDIMNSSTPAIRQMMDVYEATGKQVVGVRTVEEQDVSKYGIIGSTHQNGLIHEVGGLVEKPSPADAPSRQAVIGRYVLEPSIFSILENMSTGAGGEYQLTDALHQVALQNQLLALELEGTRYDIGDKAGYLEAVLHMGMQREDLRPMLDSMMREWALASMIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECX8</accession>
    <name>E3ECX8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Phosphoribosylamine--glycine ligase</fullName>
            <ecNumber evidence="3 8">6.3.4.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">GARS</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Glycinamide ribonucleotide synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Phosphoribosylglycinamide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">purD</name>
        <name evidence="11" type="ORF">PPSC2_04270</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>5-phospho-beta-D-ribosylamine + ATP + glycine = ADP + H(+) + N(1)-(5-phospho-beta-D-ribosyl)glycinamide + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17453"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:58681"/>
            <dbReference type="ChEBI" id="CHEBI:143788"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Purine metabolism; IMP biosynthesis via de novo pathway; N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the GARS family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.13" evidence="3 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369481.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17080"/>
    <dbReference type="EnsemblBacteria" id="ADO54847">
        <property type="protein sequence ID" value="ADO54847"/>
        <property type="gene ID" value="PPSC2_04270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.851"/>
    <dbReference type="eggNOG" id="COG0151">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027420_3_1_9"/>
    <dbReference type="OMA" id="KATVCKY"/>
    <dbReference type="OrthoDB" id="932854at2"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00125"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004637">
        <property type="term" value="F:phosphoribosylamine-glycine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009113">
        <property type="term" value="P:purine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00138">
        <property type="entry name" value="GARS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020561">
        <property type="entry name" value="PRibGlycinamid_synth_ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000115">
        <property type="entry name" value="PRibGlycinamide_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020560">
        <property type="entry name" value="PRibGlycinamide_synth_C-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037123">
        <property type="entry name" value="PRibGlycinamide_synth_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020559">
        <property type="entry name" value="PRibGlycinamide_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020562">
        <property type="entry name" value="PRibGlycinamide_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43472">
        <property type="entry name" value="PTHR43472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01071">
        <property type="entry name" value="GARS_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02843">
        <property type="entry name" value="GARS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02844">
        <property type="entry name" value="GARS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01210">
        <property type="entry name" value="GARS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00877">
        <property type="entry name" value="purD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00184">
        <property type="entry name" value="GARS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="10">
        <location>
            <begin position="107"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="421" mass="44750" checksum="BA08A9AA49EAC790" modified="2011-01-11" version="1">MDILVIGGGGREHAIVWALKKSPKAGQIYCAPGNAGIGQLAECVPIPVSEFDALTELAESKKVGLVVVGPDDPLADGIVDAFEAKGIPVFGPRKNAAEIEGSKIFMKDLLHKYQIPTATYRKFYTYEEAHAYLKEQPIPVVIKADGLAAGKGVTVAYSMEEAEKALSDIMVAKVFGEAGAQVVIEEFLAGQEMSILSFVDGETVRPMAAAQDHKPVFDGDKGPNTGGMGTYSPLPHIANSIIEEAIETIIKPTAKAMVAEGRPFRGVLFAGLMISPDGKPKTIEFNARFGDPETQVVLPRLQSDLLDIFLAAVNGTLDQVEIEWKDEAAVCVVLASGGYPAAYAKGVPIHGLDQANEAIVFHAGTGINEQGEWVTNGGRVLGVVGLGRDIAEARDKAYEQAAHITFEGKQNRTDIAAKALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECY9</accession>
    <name>E3ECY9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ycnE</name>
        <name evidence="2" type="ORF">PPSC2_04325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369492.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17135"/>
    <dbReference type="EnsemblBacteria" id="ADO54858">
        <property type="protein sequence ID" value="ADO54858"/>
        <property type="gene ID" value="PPSC2_04325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.862"/>
    <dbReference type="eggNOG" id="COG1359">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_131496_11_0_9"/>
    <dbReference type="OMA" id="FVMLEQW"/>
    <dbReference type="OrthoDB" id="1909149at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="2"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="97" mass="10790" checksum="BB827C38AEE884F8" modified="2011-01-11" version="1">MIIIHADMKVLPEKRETFLQQTQGLISASQAEEGNVRYTLMQDLNDPNAFTMVEVWKDAAAVDFHNNSAHFQAFVAAAKELLAAPLEVNAFQDATKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED54</accession>
    <name>E3ED54_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">glnH</name>
        <name evidence="11" type="ORF">PPSC2_02215</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369051.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14980"/>
    <dbReference type="EnsemblBacteria" id="ADO54411">
        <property type="protein sequence ID" value="ADO54411"/>
        <property type="gene ID" value="PPSC2_02215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.420"/>
    <dbReference type="eggNOG" id="COG0834">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_18_4_9"/>
    <dbReference type="OMA" id="FSEEPYG"/>
    <dbReference type="OrthoDB" id="685252at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0564">Palmitate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168371" evidence="8">
        <location>
            <begin position="31"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="9">
        <location>
            <begin position="51"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="PBPe" evidence="10">
        <location>
            <begin position="51"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO54411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="29924" checksum="288DBEE4E55BCCF1" modified="2011-01-11" version="1">MRKRFQWSTLVLVALTCLLVLAGCGGKQEAATSGNEAAASNGLEAIKQRGKLVVGVKYDTKLFGLKDPASGKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIATMTISDERKKQVDFSDVYFNAGQSLLVKKGSPITGLESLTPDTKVLAVKGSTSAKNIREKAPKATILEFENYQDAFNALKAGKGQALTTDNSILLGMQQQDPNYTLVGGNFTEEPYGIAVKKGQTELLQAINDTIKELKSNGEYDKLHEQWLGVKPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED63</accession>
    <name>E3ED63_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yjiN</name>
        <name evidence="2" type="ORF">PPSC2_02255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369060.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54420">
        <property type="protein sequence ID" value="ADO54420"/>
        <property type="gene ID" value="PPSC2_02255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.428"/>
    <dbReference type="eggNOG" id="COG2733">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036718_2_1_9"/>
    <dbReference type="OMA" id="YHTALIP"/>
    <dbReference type="OrthoDB" id="398440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007383">
        <property type="entry name" value="DUF445"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04286">
        <property type="entry name" value="DUF445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="394"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="418" mass="46165" checksum="AC8482C2C8380106" modified="2011-01-11" version="1">MGKTKNTKTAAAWSLVMMGAGFAATLPFQQFGWARLLAGSFEAGLVGGLADWFAVTALFRHPLGIPIPHTALLPKNRGKLTDALVNTVENNLLHKESIASKIAEIRLAELVLKSVEKGIRTPEAVTFIDVLAKQLVRSIPLAELAPAIATGVKRQATEFDIGPLLEVLARQAGERKYDQRALDYALEQTESWLLRSDTGVTLGTLGMQAVSGLQVSGLMQFALNAFLGYLNEERMGEMIRHFLLDRVAELRDEGHPRRQAVLDGFNTQLIHLAAKDTVSEGLNHWKNTFIDSWEGDAAISDKLEELRRNLLDYMEDASYVTAYIVPLLDQMLSDLWRNTELLDKINSWIVAGVTGVVEANHSQIGNLVRENVNRMDDASLIALMEDKLGQDLQWIRINGALTGFLIGIVLTGVRMLLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDF5</accession>
    <name>E3EDF5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Pectate lyase</fullName>
            <ecNumber evidence="4 5">4.2.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yvpA</name>
        <name evidence="6" type="ORF">PPSC2_04665</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the depolymerization of both polygalacturonate and pectins of methyl esterification degree from 22 to 89%, with an endo mode of action. In contrast to the majority of pectate lyases, displays high activity on highly methylated pectins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>Eliminative cleavage of (1-&gt;4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends.</text>
            <dbReference type="EC" id="4.2.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 5">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the polysaccharide lyase 3 family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.2" evidence="4 5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369567.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17560"/>
    <dbReference type="CAZy" id="PL3">
        <property type="family name" value="Polysaccharide Lyase Family 3"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54934">
        <property type="protein sequence ID" value="ADO54934"/>
        <property type="gene ID" value="PPSC2_04665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.937"/>
    <dbReference type="eggNOG" id="COG5297">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044863_3_1_9"/>
    <dbReference type="OMA" id="IFQINKA"/>
    <dbReference type="OrthoDB" id="1188591at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030570">
        <property type="term" value="F:pectate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004898">
        <property type="entry name" value="Pectate_lyase_PlyH/PlyE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33407">
        <property type="entry name" value="PTHR33407"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03211">
        <property type="entry name" value="Pectate_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0106">Calcium</keyword>
    <keyword evidence="5 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5025085157" description="Pectate lyase" evidence="5">
        <location>
            <begin position="34"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU367009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="24619" checksum="E6B5FB1419B858EE" modified="2011-01-11" version="1">MKTNTAKVLKKGMSIALSGMLIALFVGNYSAHAAPEVVHKTILVKAGEVYDGKGKTVVADPDTLGDGSQKEAQKPIFKLENNATLKNVIIAAPAADGVHVYGNGTISNVTWEDVGEDALTLKEPGTVNITGGGAYHAYDKVFQINAEGTINIKNFRADDIGKLVRQLGGSTFRVNMTLDNSDISNVKDSILRSDGPNSKAKITNTRYHNVKQLFKGFKSSNTSESGNTKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDK4</accession>
    <name>E3EDK4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PadR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">padR3</name>
        <name evidence="2" type="ORF">PPSC2_06425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369943.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19370"/>
    <dbReference type="EnsemblBacteria" id="ADO55312">
        <property type="protein sequence ID" value="ADO55312"/>
        <property type="gene ID" value="PPSC2_06425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1323"/>
    <dbReference type="eggNOG" id="COG1695">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089258_4_1_9"/>
    <dbReference type="OMA" id="HGYEIQQ"/>
    <dbReference type="OrthoDB" id="1706427at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005149">
        <property type="entry name" value="Tscrpt_reg_PadR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03551">
        <property type="entry name" value="PadR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PadR" evidence="1">
        <location>
            <begin position="8"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="180" mass="20708" checksum="8C436CF10A429CCB" modified="2011-01-11" version="1">MSTTRVMVLGLLLQYGAMSGYEIQQKMQSAQTDKWAYVQPASIYHALKKLDSEGIVRLETLEQTGNRSKAIYAITETGKGEFSRLLIESFKETSVVFPTALYTALTFMDEAGLHEIEEALSFQHQAIEKIYKEMKLGQEQKAELMDIPVNVMLIFKNIYDQCELQLKFIKQIKEEIRRNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDN9</accession>
    <name>E3EDN9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YugU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yugU</name>
        <name evidence="2" type="ORF">PPSC2_06585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0047 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369978.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19550"/>
    <dbReference type="EnsemblBacteria" id="ADO55347">
        <property type="protein sequence ID" value="ADO55347"/>
        <property type="gene ID" value="PPSC2_06585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1356"/>
    <dbReference type="eggNOG" id="COG0432">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096980_1_1_9"/>
    <dbReference type="OMA" id="VRHTSCS"/>
    <dbReference type="OrthoDB" id="1691156at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001602">
        <property type="entry name" value="UPF0047"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035917">
        <property type="entry name" value="YjbQ-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30615">
        <property type="entry name" value="PTHR30615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01894">
        <property type="entry name" value="UPF0047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004681">
        <property type="entry name" value="UCP004681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111038">
        <property type="entry name" value="SSF111038"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00149">
        <property type="entry name" value="TIGR00149_YjbQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="133" mass="15269" checksum="4CE7501BEC158B4E" modified="2011-01-11" version="1">MLHTFELSTTRRDEMRDITREVAALIEKSGVQQGTALIYCPHTTAGIAINENADPDVKHDVILRLDEVYPWEHPQYRHMEGNTASHLKSITTGPSQTVIIHDGKLLLGRWQGLYFCEFDGPRRRQYHVKIMKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE41</accession>
    <name>E3EE41_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydfF</name>
        <name evidence="3" type="ORF">PPSC2_02810</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369161.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15625"/>
    <dbReference type="EnsemblBacteria" id="ADO54521">
        <property type="protein sequence ID" value="ADO54521"/>
        <property type="gene ID" value="PPSC2_02810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.532"/>
    <dbReference type="eggNOG" id="COG0640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077964_0_1_9"/>
    <dbReference type="OMA" id="CPCLDWS"/>
    <dbReference type="OrthoDB" id="1948031at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168822" evidence="1">
        <location>
            <begin position="21"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="domain" description="HTH arsR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="25687" checksum="B6D00A663E08B2A1" modified="2011-01-11" version="1">MSTKSNVAMIASLVSEPSRAAILTALLDGRFHTASELAHMAGIKPQTASFHLAKMTEAQVVTVEKQGRHRYYGIQDPEVAQVMESLLSIAPPVPIKSFKQASENEAIRLARTCYDHVAGHLGVQIMSFFIQRGILSEDQDGLHITQQGEIFFADFQIDLKNTRQKRRSFSHKCLDWSERRHHLAGALGSALLDRLFELHWVEHLPTTRAIRITAEGKRGFKEVFSIEIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE75</accession>
    <name>E3EE75_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF3899 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_04975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369631.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1016"/>
    <dbReference type="EnsemblBacteria" id="ADO54998">
        <property type="protein sequence ID" value="ADO54998"/>
        <property type="gene ID" value="PPSC2_04975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1003"/>
    <dbReference type="eggNOG" id="ENOG5033D6F">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1979355_0_0_9"/>
    <dbReference type="OMA" id="AWKTSMF"/>
    <dbReference type="OrthoDB" id="1768270at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025007">
        <property type="entry name" value="DUF3899"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13038">
        <property type="entry name" value="DUF3899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3899" evidence="2">
        <location>
            <begin position="35"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="13889" checksum="D9CBA3CE37B3CB5B" modified="2011-01-11" version="1">MILRFGITALIVGTLGFLYAAPHLMYGRENLATANLLFLLGLLGLVIGAIFHVLQSGFLTLFLRGFADMGQLFIRQSKALQEENERLRSDESLSAWKTSMFRHLKVYTSGCGTGLLLCSIVLMGMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE90</accession>
    <name>E3EE90_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaS5</name>
        <name evidence="5" type="ORF">PPSC2_05045</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369646.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17925"/>
    <dbReference type="EnsemblBacteria" id="ADO55013">
        <property type="protein sequence ID" value="ADO55013"/>
        <property type="gene ID" value="PPSC2_05045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1018"/>
    <dbReference type="eggNOG" id="COG1917">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="OMA" id="INSGCLH"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="193"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="34707" checksum="C664ECC3FAFD12D0" modified="2011-01-11" version="1">MQIKNFMIDQNLKELTEHRTVVLPVACYETTINQNIHGYVPLHWHDEIQFVLVEKGEAIFQINEDKRIVRQGDGLFINSGCLHMAEDKNDSGCVYICLNVSPHFVLSQELYTPYVAPYIQATNLPYVYIDSDELWGKNILDAILKMNQYIQQKSPYFEMDITMHLTLIWKNLVINGFQLEYDQMEMVKSQRIKQMLNWIYLHYAEKVTLDDIAKAGQLSRSECCRYFKRILKVTPLNYVMDYRIQKSLVLLQQAESNVTEVAYKVGFNSTSYFIERFRKAMNMTPLAYKRSKMDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEI1</accession>
    <name>E3EEI1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Mannose-6-phosphate isomerase</fullName>
            <ecNumber evidence="3 4">5.3.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">manA1</name>
        <name evidence="7" type="ORF">PPSC2_06985</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>D-mannose 6-phosphate = D-fructose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:12356"/>
            <dbReference type="ChEBI" id="CHEBI:58735"/>
            <dbReference type="ChEBI" id="CHEBI:61527"/>
            <dbReference type="EC" id="5.3.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="5">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the mannose-6-phosphate isomerase type 1 family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.8" evidence="3 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370063.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19965"/>
    <dbReference type="EnsemblBacteria" id="ADO55432">
        <property type="protein sequence ID" value="ADO55432"/>
        <property type="gene ID" value="PPSC2_06985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1439"/>
    <dbReference type="eggNOG" id="COG1482">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020529_0_1_9"/>
    <dbReference type="OMA" id="DTFFINT"/>
    <dbReference type="OrthoDB" id="645703at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004476">
        <property type="term" value="F:mannose-6-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001250">
        <property type="entry name" value="Man6P_Isoase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014628">
        <property type="entry name" value="Man6P_isomerase_Firm_short"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01238">
        <property type="entry name" value="PMI_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036894">
        <property type="entry name" value="PMI_Firm_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <feature type="active site" evidence="6">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR036894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR036894-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR036894-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="35235" checksum="FC18E333EF8E7DDA" modified="2011-01-11" version="1">MLKPYPLQFQPEFKERVWGGRALEQFGLTPPEGHIGEGWMIADHPNGTTTVINGELAGKGLDEIRQTYGQDWLGAKGVSKKGGRFPLLIKLLDCNDDLSVQVHPTDDYAGLPAGELGKTEMWYVLDAKPDAKIIYGLTEGVTRESLRTALESGDIMGSLRQVPVEAGDTFFIPAGTVHALCAGVVVAEIQQNSDTTYRLYDYNRPGLDGKPRELHIEDSLNVTSYEGAGATTMKTDGLQPGEWLQLASCEYFVVEKGIVDGSWALSTTEDSFTILVICEGSGTITWDNNTESLSCKAGDCFLLPANLGGYTLNDGMTVLRSYLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEI4</accession>
    <name>E3EEI4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370066.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55435">
        <property type="protein sequence ID" value="ADO55435"/>
        <property type="gene ID" value="PPSC2_07000"/>
    </dbReference>
    <dbReference type="GeneID" id="66573536"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1443"/>
    <dbReference type="eggNOG" id="ENOG5030616">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_209781_0_0_9"/>
    <dbReference type="OMA" id="ACQKTID"/>
    <dbReference type="OrthoDB" id="2023073at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="7278" checksum="E9973FBBC68F7237" modified="2011-01-11" version="1">MNTQDKTRMDKVTVELTFDEALALTGVRFGQDRQIGTAARQKIRAACQKTIDFSPADGVDYEQLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEL6</accession>
    <name>E3EEL6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370326.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20780"/>
    <dbReference type="EnsemblBacteria" id="ADO55703">
        <property type="protein sequence ID" value="ADO55703"/>
        <property type="gene ID" value="PPSC2_08175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1719"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133230_0_0_9"/>
    <dbReference type="OMA" id="AHEMTTG"/>
    <dbReference type="OrthoDB" id="1884157at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="18844" checksum="273E94B2D2820DF3" modified="2011-01-11" version="1">MPQISDVQHLPARSWVLRRRQLLFLARSSGGMRITRNALRQLAVLTPEQLNTPGSSLLCAYVRTEKGLRIAGFSLALNYGKDACIVIVRPLYRGRRLGARLLSAQLQQLRRLTCSVATDNMASLKTCFRAGLIAHEMTTGPTGKPTLIFCGKLSEDEQTAEEGGMLCQNLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEQ0</accession>
    <name>E3EEQ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aer</name>
        <name evidence="3" type="ORF">PPSC2_08335</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370357.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20940"/>
    <dbReference type="EnsemblBacteria" id="ADO55737">
        <property type="protein sequence ID" value="ADO55737"/>
        <property type="gene ID" value="PPSC2_08335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1752"/>
    <dbReference type="eggNOG" id="COG0517">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_711409_0_0_9"/>
    <dbReference type="OMA" id="IMRDAYN"/>
    <dbReference type="OrthoDB" id="429006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="Methyl-accepting transducer" evidence="2">
        <location>
            <begin position="159"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="41596" checksum="397DE870CDABB8E7" modified="2011-01-11" version="1">MITEPKTQTSSTAVIERETFKPITTYVPCREVPIIGTDMSCKELLALMKTQEDIPCVIVVDKNDLPLGIIMRDAYNRHFTGRFAAALFYDKPASIFADPNTLIVDLKSPAAEIVEQAMMREDQRFYDCLLIKEGTRLLGVFTIRDILSVVQRMQREADEDRGDVIRHSYDGVQRIRMTVLDAAKEADDSVQLTRSMSELSRRGKVELEDVLLSYHAVTEQMKRQHEQMTALTQSLNDIAGMASSIRALADHSGLLAINASIEAAHAGEYGRGFQIVSQEVRNMSLQTKAFSVQITGLLTHIEQMLRDTAELTDTSMQQIHTGSKFISAGTQTFSKLLQAVDEIEAKNSEMSRSAEEAALNAAGIAQELELMLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF94</accession>
    <name>E3EF94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ycf48</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ycf48</name>
        <name evidence="3" type="ORF">PPSC2_05255</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369690.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18170"/>
    <dbReference type="EnsemblBacteria" id="ADO55057">
        <property type="protein sequence ID" value="ADO55057"/>
        <property type="gene ID" value="PPSC2_05255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1065"/>
    <dbReference type="eggNOG" id="COG4447">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052334_0_0_9"/>
    <dbReference type="OMA" id="CDKPNTI"/>
    <dbReference type="OrthoDB" id="1293876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002860">
        <property type="entry name" value="BNR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02012">
        <property type="entry name" value="BNR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169167" evidence="2">
        <location>
            <begin position="32"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="24"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="311"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="430" mass="45266" checksum="F62EC200F9EE3462" modified="2011-01-11" version="1">MKKKTSVWVLLLAVALVAAGCESNSQTGQTAQNKPKDSAASQVNGSGATVDTPEQQTTSDGKNSTSPSSTGKAVETGGQATTDASIAKVRMDNITALRLIDGQSGWIGGNGWIARTDAAPSGSVGSAWNVQYQGKGTVQQIFALNGQQAWAVMEDSGSLLATLDGGKRWEAVGTVPEQGQAGFLHFVSSKEGFSGNQYTKDGGQSWSPLPVPSHIVGQPYYHDRQNGWAVTQSTERSFQILHTINGGQNWTPVMSRTTEGPLNGVTIRSVERGNAWIELVGDTGMNQTSYSLWHTADSGQSWRTVLANSTAGGGPAPGIGQQDNQVPKNEGTAPGMLYAVNSSTALMGGYCAPCDKPNTIGWTTDGGKTWNNGKQGFEGYGNQQIGMANAKEGWAIFSDSEQAPILYTTSDGGQHWTQSHVFDKPVTPGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFC8</accession>
    <name>E3EFC8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369724.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18315"/>
    <dbReference type="EnsemblBacteria" id="ADO55091">
        <property type="protein sequence ID" value="ADO55091"/>
        <property type="gene ID" value="PPSC2_05395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1094"/>
    <dbReference type="eggNOG" id="ENOG5032W6K">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_896715_0_0_9"/>
    <dbReference type="OMA" id="CYLLPFW"/>
    <dbReference type="OrthoDB" id="1010906at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="35567" checksum="BC6C6083C5877249" modified="2011-01-11" version="1">MEWYFAYKEELEKVFRQAEERTATFPVPFQQEGLDYLARFNPLREDSTRNYICYLLPFWLQELTGLSPETCRKLSLGNVFVMAHYLIQDDVMDTAADNRKTQLALSQLFYTECLNIYQELFPATSPFWSYARTYVDEWAVSVISEGTEDYFQGERNKVALKASPLKMAGTGALLLADHADLIQTVTHMTDLSLLVLQMSDDWADWSEDLVEHSYNCLLSHISAEQKTAYCEGLGPQQIQEAIYVRGALASYANIANQSVQELETMEPSIHGLYRFAHSIATELSEEAAEIEGGRSHLRRGGLDYWLSKNMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFK1</accession>
    <name>E3EFK1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cystathionine gamma-synthase</fullName>
            <ecNumber evidence="4">2.5.1.48</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">metC3</name>
        <name evidence="4" type="ORF">PPSC2_07250</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the trans-sulfuration enzymes family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.48" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370119.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20230"/>
    <dbReference type="EnsemblBacteria" id="ADO55492">
        <property type="protein sequence ID" value="ADO55492"/>
        <property type="gene ID" value="PPSC2_07250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1497"/>
    <dbReference type="eggNOG" id="COG0626">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018986_2_0_9"/>
    <dbReference type="OMA" id="THGGIIV"/>
    <dbReference type="OrthoDB" id="637281at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003962">
        <property type="term" value="F:cystathionine gamma-synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102028">
        <property type="term" value="F:cystathionine gamma-synthase activity (acts on O-phosphohomoserine)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11808">
        <property type="entry name" value="PTHR11808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00868">
        <property type="entry name" value="CYS_MET_METAB_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="392" mass="43028" checksum="B95B29A1D6FF2928" modified="2011-01-11" version="1">MIEDARKIGEDLDKGRKFATKLLHFGSEIDSVTGASSVPIYQASTFHHHDIFNPPQHDYSRSGNPTRQALEDYIALLEGGACGFAFASGMAAISTTFMLLSAGDHVIVSEDVYGGTYRLLTSILKRMNIETTFVDMTDLNLVKEALQENTRAVYMETPSNPTLKITDVAGITSWARDNGLLTLLDNTFMTPYYQRPIEQGVDIVLHSATKFLGGHSDVLAGLAVARTESLGRQIKQLQNGLGTVLAPQESWLLMRGMKTLEARMAHSEKSAAKLANWLNERNDIEAVYYPGLENHPGRAVHESQSSGYGAVISFDVGSGERAKEVLSRVRIPIVAVSLGAVESILSYPAMMSHAAMPQSVRLERRITDGLLRFSVGLEDIDDLIRDLDEALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFS9</accession>
    <name>E3EFS9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370420.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1829"/>
    <dbReference type="EnsemblBacteria" id="ADO55801">
        <property type="protein sequence ID" value="ADO55801"/>
        <property type="gene ID" value="PPSC2_08630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1817"/>
    <dbReference type="eggNOG" id="ENOG502ZSP0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2410503_0_0_9"/>
    <dbReference type="OrthoDB" id="2027821at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="11043" checksum="B953EBC02F7517E3" modified="2011-01-11" version="1">METKWLAYRIFPEPLGTTYQDYDLMNRADVEKLFDYCQILEAMISRQGWQFLINHHSYPVLFEINEGSEWFDCESVEEFIFEVEAHIDSLPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG49</accession>
    <name>E3EG49_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cobyrinic acid a,c-diamide synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nifH</name>
        <name evidence="5" type="ORF">PPSC2_09965</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParA family. MinD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370693.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22435"/>
    <dbReference type="EnsemblBacteria" id="ADO56082">
        <property type="protein sequence ID" value="ADO56082"/>
        <property type="gene ID" value="PPSC2_09965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2099"/>
    <dbReference type="eggNOG" id="COG0455">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037612_0_0_9"/>
    <dbReference type="OMA" id="FKVAKNN"/>
    <dbReference type="OrthoDB" id="1370117at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02038">
        <property type="entry name" value="FlhG-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033875">
        <property type="entry name" value="FlhG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025501">
        <property type="entry name" value="MinD_FleN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003092">
        <property type="entry name" value="MinD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="4">
        <location>
            <begin position="30"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="32399" checksum="E30EE4C9CD49AC5B" modified="2011-01-11" version="1">MSDQAQSLRQMASSLDKYRLPPRNRHAKIITITSGKGGVGKSNFTLNFALALQSLGRKVLVFDADIGMANIDVLMGAHSQYNLLHLLKREKSIDEIIQTGIGGLPYIAGGSGLSELFALSDENLNYFAEEVEKMAADMDYILFDTGAGLSKENLKFITSADECMVVTTPEPTSLTDAYALIKVVNGLQKDTVFKIIVNRADNDNEARQVADKIALVAKRFLEIEIPLLGHISDDTHVMQAVKRQVPFMVAFPGCTASRDVLNLAHRFAAMPQVPQSGALSGIKGFMQKWLRRSMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK3</accession>
    <name>E3EGK3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycosyl hydrolase family 35</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">xylR1</name>
        <name evidence="7" type="ORF">PPSC2_03340</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 35 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369279.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16135"/>
    <dbReference type="CAZy" id="GH35">
        <property type="family name" value="Glycoside Hydrolase Family 35"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54642">
        <property type="protein sequence ID" value="ADO54642"/>
        <property type="gene ID" value="PPSC2_03340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.652"/>
    <dbReference type="eggNOG" id="COG1874">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018711_0_0_9"/>
    <dbReference type="OMA" id="WIHHEEI"/>
    <dbReference type="OrthoDB" id="831762at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018954">
        <property type="entry name" value="Betagal_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037110">
        <property type="entry name" value="Betagal_dom2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031330">
        <property type="entry name" value="Gly_Hdrlase_35_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001944">
        <property type="entry name" value="Glycoside_Hdrlase_35"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23421">
        <property type="entry name" value="PTHR23421"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10435">
        <property type="entry name" value="BetaGal_dom2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01301">
        <property type="entry name" value="Glyco_hydro_35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00742">
        <property type="entry name" value="GLHYDRLASE35"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_35" evidence="5">
        <location>
            <begin position="41"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="domain" description="BetaGal_dom2" evidence="6">
        <location>
            <begin position="447"/>
            <end position="577"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009809"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF10435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="784" mass="89973" checksum="A034303CDFB2EB86" modified="2011-01-11" version="1">MRNYRITVQDDHKQIVKGHLKLGGTNPKGEQIGFTNYFMEKDGEPFFGICGEFHYTRYDERYWEDEIIKIKMGGVNIIATYIFWNLHEEVEGSFNWSGNKNLRHFIELCGKHQLYVIIRIGPFNHGEIRNGGIPDWLFGRPFEVRSNDEGYLFYTRKMYNEIGIQVKGLLYKEGGPIIGTQIENEHHHSSAQWGLTVGINDTWLNSGSDGNSHMLKLKEIALEAGIDTPIYTCTGWGGATTPVPDMLPLWGGYAYWPWIYYEEGRLEGKDEHPATPEYIFRDKHNNKIPKSYNFEPLYAPEDYPYACCEMGGGMVQFYKYRFAFPYRSVPAMTVMKVAEGCNLIGYYMYHGGSNPRGKVNPFTNDLATPKISYDFNAMIGEFGQIRESYRRTKLQHYFLSTFQKQFSLTKTILPEDTSRMDPYDVDTLRYAVRSSAGSGYLFLNNFQDHVENHDLYDFNVSIELAEETIVIPSQGELTLGRDSFAILPFNLNLDGIKLKYATAQLITRIEEEEIYYFFFVPDGMKGTYALESKDIISATIDKGSIEQLDGNTIIQIAEEEESLIRLVFESGLKVAIYTMTDEQSLEFWKVNLQGRDRVILTSANLLVSEDEIRLESTDQEIVALSVFPDFDDSITSISGGELFATTESELFTMYLLRVPKKEIQFNLKRVNHDKFVLDFEINAFNGIKEALLRIDYTGDIGYAFIDGELIHDNFCNHTTWEIGLKSFEHRLIERGMYVYVAPIRKGKVLNSNTTMAGWKETAEERIADIGTVSIVPVYEIKITL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGU2</accession>
    <name>E3EGU2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="18">Glutamate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="18" type="primary">gltA</name>
        <name evidence="18" type="ORF">PPSC2_05780</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 19">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="14">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glutamate synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369808.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18745"/>
    <dbReference type="EnsemblBacteria" id="ADO55176">
        <property type="protein sequence ID" value="ADO55176"/>
        <property type="gene ID" value="PPSC2_05780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1182"/>
    <dbReference type="eggNOG" id="COG0067">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0069">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000422_8_2_9"/>
    <dbReference type="OMA" id="TVFRLQH"/>
    <dbReference type="OrthoDB" id="5568at2"/>
    <dbReference type="UniPathway" id="UPA00920">
        <property type="reaction ID" value="UER00891"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051538">
        <property type="term" value="F:3 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015930">
        <property type="term" value="F:glutamate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006537">
        <property type="term" value="P:glutamate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00982">
        <property type="entry name" value="gltB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02808">
        <property type="entry name" value="GltS_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002489">
        <property type="entry name" value="Glu_synth_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036485">
        <property type="entry name" value="Glu_synth_asu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006982">
        <property type="entry name" value="Glu_synth_centr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002932">
        <property type="entry name" value="Glu_synthdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00310">
        <property type="entry name" value="GATase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04898">
        <property type="entry name" value="Glu_syn_central"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01645">
        <property type="entry name" value="Glu_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01493">
        <property type="entry name" value="GXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69336">
        <property type="entry name" value="SSF69336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0288">FMN</keyword>
    <keyword evidence="12" id="KW-0314">Glutamate biosynthesis</keyword>
    <keyword evidence="8" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="17">
        <location>
            <begin position="22"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="domain" description="WW" evidence="16">
        <location>
            <begin position="323"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="908"/>
            <end position="934"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ADO55176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1532" mass="169185" checksum="0142A8D65C477DEE" modified="2011-01-11" version="1">MRQTGLPPKQGLYDPQFEKDACGMGFVAHIKGKPSHDIVSQALTMLVNMEHRGGQGSEPNSGDGAGIMIQVPHLFFQEEAERLGFKLPKAGHYGVGMLFVSNDSKVREMHEQKLREIIMDEGQNCLGFRDVPTYDEMLGKSAKAAKPGVRQVFIGRSSDLKEELDFERKLYVIRKRAELAIRYNQEDMNGESFYIPSLSCRKVVYKGMLTTEQVGKFYLDLQDERVTSAIALVHSRFSTNTFPSWDRAHPYRFMIHNGEINTMRGNVNWMHARQAQFESEAFGNDIKKVKPVINPDGSDTAMFDNTLEFLYLSGRSLPHVAMMMVPEPWNKHETMDPKKRAFYEYHSTMMEPWDGPAAMAFTDGIQIGAILDRNGLRPARYYVTKDDLIALSSEAGVLDIAPENVLYKDRLRPGRMLLVDTQEGRIVSDEELKERIASEEPYQQWLDEHLIDLDDLPEALEQPEPKHENVNQLQLAFGYTFEELRKLLEPMALTGAEPIGSMGYDAPLAVLSDRPQRLYNYFKQMFAQVTNPPIDAIREEIVTSTATTIGPERNLLHPEPESCRQIRLDSPVLSNEEFAKIRHVHRPGFKSMTIPIFFEAKEGAEGLYKALEGLFEAADRVIDKGHNILILSDRGVDAENAAIPALLAVSSLHHHLIKQGTRTRVSILLESGEPRDIHHYAVLLGYGVSAVNPYLAFETLDVMIQQGLLRGISHEKAVKNYIKAATKGVVKILSKMGISTIQSYRGAQIFEAVGLKQEFVDRYFTWTPSRIGGIGLEEVTMEALAHHNRAFTDKDGNDKVLDSGGEYQWRNDGEEHLFNPQTVHLLQQSVRSGDYELYKKYTKLVQGESEQHLTIRSMLQLKPAGEPVPLDEVESAASIMRRFKTGAMSFGSISQEAHEDLAIAMNRIGGKSNTGEGGENPARFTPDANGDSRRSSIKQVASGRFGVTSNYLVNADEIQIKMAQGAKPGEGGQLPGRKVYPWVAEVRGSTPGVGLISPPPHHDIYSIEDLAELIYDLKNANPRADINVKLVSEVGVGTIATGVAKGRADIILVSGYDGGTGASPQGSIRHAGMPWELGLAETHQTLMLNNLRDRVVLETDGKMLSGRDLVVAALLGAEEYGFSTAPLVALGCIMMRVCQMDTCPVGVATQNPELRKNYMGDPAHVVNFMRFIAEDVREIMAELGFRTIQEMIGRTDCLDTVNADSHWKKKGVDLSLLLHVPELEDGSVRYRVQRQNHGLEETLDMLKLVPMAAEALESGTPVEGTLPITNVNRAVGTILGSEVTRKYGAAGLPEDTIRFNFIGSAGQSFGAFIPKGITLSVEGDSNDYVGKGLSGGKVIVKKSHKATFKAEENIIIGNTALYGATSGEAYINGIAGERFAVRNSGARIVVEGVGDHGCEYMTGGRVAVLGGTGRNFGAGMSGGIAYVYDPEGTFLSRCNLEMVLLEDVEDPGETADLRGLIQRHVTYTGSEAGQRILDEWQTAIQQFVRVIPKDYKRMVEQIQKEEATGLSGDEALLAAFEANMRELARTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH28</accession>
    <name>E3EH28_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07685</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370215.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55588">
        <property type="protein sequence ID" value="ADO55588"/>
        <property type="gene ID" value="PPSC2_07685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1593"/>
    <dbReference type="eggNOG" id="COG4842">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_655267_0_0_9"/>
    <dbReference type="OMA" id="EVVGHYE"/>
    <dbReference type="OrthoDB" id="481612at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036689">
        <property type="entry name" value="ESAT-6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010310">
        <property type="entry name" value="T7SS_ESAT-6-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06013">
        <property type="entry name" value="WXG100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140453">
        <property type="entry name" value="SSF140453"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03930">
        <property type="entry name" value="WXG100_ESAT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="419" mass="46628" checksum="9C6A3870474A6C0B" modified="2011-01-11" version="1">MTTIKVTPEQLMTVSKQFELAQQTATQMNSNLLKQISSMGQLWEGLTKEHFYYSFQTAQKNMNDFVTLMDSIARELRHHADKFRLADLMEAGNIDTSCLPPPPNSCAIPAPDTRNAFQKSVDSLTELGQDFVDANSVRYEKKFDSVWSFLDYMSYGIPKGMYQGYMERAAKQNDSWNDMLNFGTFGITGMIQGAFNPTNAWSKEHWANMIGTAGLFGGVSSVIKPKIGLSGSIKYTPLKDGTTRIIKEADNARKIIDTNGLRNEVPLTVAQIEGLTQYAKKLGMPQENIRVAGPNDTSPTGLLFDTILNINNDVLPSNATGKLAANSRITGHGTIAHEVVGHYEAGLAGKSFRVMDDEFNVITRNFALDEAQASIRAARFAPDLTQLERIMLLRDGITRLKNEGIKIREVKDILFIHER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH72</accession>
    <name>E3EH72_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Signal transduction histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370481.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1892"/>
    <dbReference type="EnsemblBacteria" id="ADO55864">
        <property type="protein sequence ID" value="ADO55864"/>
        <property type="gene ID" value="PPSC2_08925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1881"/>
    <dbReference type="eggNOG" id="ENOG502ZT4S">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_199886_1_0_9"/>
    <dbReference type="OMA" id="DYTNIVI"/>
    <dbReference type="OrthoDB" id="2078064at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="6920" checksum="3153A495039A1CB3" modified="2011-01-11" version="1">MVSNSYLIFIILAFTLGGVLIMKRETIPAPLKKWMALTAVIMICLAFYLIVYSLLNIGSNPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH90</accession>
    <name>E3EH90_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhdQ</name>
        <name evidence="2" type="ORF">PPSC2_09015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55881.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21480"/>
    <dbReference type="EnsemblBacteria" id="ADO55881">
        <property type="protein sequence ID" value="ADO55881"/>
        <property type="gene ID" value="PPSC2_09015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1899"/>
    <dbReference type="eggNOG" id="COG0789">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060077_6_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="15"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55881.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="155" mass="18025" checksum="AC517410A5DF8AD3" modified="2015-05-27" version="2">MNEEREVKTDGDMKLYRIGELAKAAGVSERTIDYYTKLGLITPEERSLKNYRLYNGETLNRLERINQMKQEKYSLEEIRQTLIKWNSVAGEEHVTDKLTSLEMHMQRLEREVNELQPLLGQLKPVQARKLLTGLLPQSAACIEALKYLLEHSSMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHA5</accession>
    <name>E3EHA5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">rRNA cytosine-C5-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sun2</name>
        <name evidence="7" type="ORF">PPSC2_09080</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370513.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21550"/>
    <dbReference type="EnsemblBacteria" id="ADO55896">
        <property type="protein sequence ID" value="ADO55896"/>
        <property type="gene ID" value="PPSC2_09080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1913"/>
    <dbReference type="eggNOG" id="COG0144">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3270">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005316_6_1_9"/>
    <dbReference type="OMA" id="PQDNDTE"/>
    <dbReference type="OrthoDB" id="1064993at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001510">
        <property type="term" value="P:RNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031341">
        <property type="entry name" value="Methyltr_RsmF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001678">
        <property type="entry name" value="MeTrfase_RsmB/NOP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027391">
        <property type="entry name" value="Nol1_Nop2_Fmu_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023267">
        <property type="entry name" value="RCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031340">
        <property type="entry name" value="RsmF_methylt_CI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22807">
        <property type="entry name" value="PTHR22807"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01189">
        <property type="entry name" value="Methyltr_RsmB-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17125">
        <property type="entry name" value="Methyltr_RsmF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13636">
        <property type="entry name" value="Methyltranf_PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17126">
        <property type="entry name" value="RsmF_methylt_CI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR02008">
        <property type="entry name" value="RCMTFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51686">
        <property type="entry name" value="SAM_MT_RSMB_NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM_MT_RSMB_NOP" evidence="6">
        <location>
            <begin position="24"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="4">
        <location>
            <begin position="111"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="358"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="385"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="555" mass="61247" checksum="12CEBBC1F896387E" modified="2011-01-11" version="1">MGVQLPTAFVKRMEQLLGDEFEAFMAAYDHTPHAGIRVNTLKIPVEDFKERSPFELRPIPWCATGFYIPHGTKPGLHPYYHAGLYYVQEPSAMSPVELLNVAQGEAVLDLCAAPGGKSTQIAAKLQGSGILVTNDISVDRTKALAKNVELYGVRNAVVLNESPDRIADAFPHFFNKILIDAPCSGEGMFRKDEDMAKQWETHSVEKCVVMQRDILRVAASMLSDGGRIVYSTCTFAPEENEGMIAEFLDAHPDFNVVPVPSEAGFAPGHPEWMNEEIASAHPELRGTARLWPHLVEGEGHFIAVLQHQGGARVASTADHTVSGDMVPFSNKNDRVLNIEAAYPQKKQHLPVKEALLPSGQGRRTTDEPKRTGKGMGGKLAKGKNTRGFDGSKSRMGKENVKSAARSPHDVLESYHQFVQEQLEVSFAGYTVVYGDRIYQSPLASHRLDGLKVVRPGWFMGTDKNGRFVPSHPLAVALRPSEAVRSINLSSSDAEAIRYLKGETLSIPVERIELRNEVQPKGFTLVCIDGYSAGWGKWQDGMLKNEYPTGWRWTSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHC0</accession>
    <name>E3EHC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">N-acetylmuramoyl-L-alanine amidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cwlD1</name>
        <name evidence="3" type="ORF">PPSC2_09150</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370528.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21620"/>
    <dbReference type="EnsemblBacteria" id="ADO55911">
        <property type="protein sequence ID" value="ADO55911"/>
        <property type="gene ID" value="PPSC2_09150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1929"/>
    <dbReference type="eggNOG" id="COG0860">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014322_7_2_9"/>
    <dbReference type="OMA" id="DDNRWLQ"/>
    <dbReference type="OrthoDB" id="1184688at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008745">
        <property type="term" value="F:N-acetylmuramoyl-L-alanine amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02696">
        <property type="entry name" value="MurNAc-LAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002508">
        <property type="entry name" value="MurNAc-LAA_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01520">
        <property type="entry name" value="Amidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00646">
        <property type="entry name" value="Ami_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168955" evidence="1">
        <location>
            <begin position="33"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="MurNAc-LAA" evidence="2">
        <location>
            <begin position="144"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="28225" checksum="123C9E7B02D3C68A" modified="2011-01-11" version="1">MLNKKLNKIWLIGLGLNFCILCSAVFAPFAYATTQPGEKSTDTNKHTETSFNRSYHAFAKPVVLIDVGHGGVDGGTSHKGLLEKDINLAIAQKLYLILRSQSYPAVLNRDKDYALSDDNRWLQSKSRHLKDLAQRKSLTEQLPTAVVVSLHVNWAKRAEKRGPIVLYQDEGSSYMLAEQIQRSLNRLFCMNRQTMYGKPFYLLNKIQHPAVIVETGFISNEQDRALLSGDRGQKRIAEAIAEGIIAHLTAW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH1</accession>
    <name>E3EHH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dipicolinate synthase subunit B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370733.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22625"/>
    <dbReference type="EnsemblBacteria" id="ADO56124">
        <property type="protein sequence ID" value="ADO56124"/>
        <property type="gene ID" value="PPSC2_10155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2140"/>
    <dbReference type="eggNOG" id="COG0452">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_118958_0_0_9"/>
    <dbReference type="OMA" id="AKAHLRN"/>
    <dbReference type="OrthoDB" id="1384786at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014214">
        <property type="entry name" value="Dipicolinic_acid_synth_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036551">
        <property type="entry name" value="Flavin_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003382">
        <property type="entry name" value="Flavoprotein"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02441">
        <property type="entry name" value="Flavoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001390">
        <property type="entry name" value="Dipicolinate_synth_subunit_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52507">
        <property type="entry name" value="SSF52507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02852">
        <property type="entry name" value="spore_dpaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavoprotein" evidence="1">
        <location>
            <begin position="7"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="21248" checksum="54793CA974FF3A7E" modified="2011-01-11" version="1">MSWQGKTVGYAITGSHCTFEEVMPVIQRFVDEGAKVVPIISNTVLTTDTRFGTSQSWQKQLKDITGNDIISTIVEAEPLGPSQMLDVLVIAPLTGNSMSKLANAMTDSPVLMAAKAQLRNGRPLLLAISTNDGLGLNAANIAKLLVAKNIFFVPFGQDNPVKKPNSLVANMELIPEAAYEALQGKQIQPMIVERKTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHJ4</accession>
    <name>E3EHJ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Metallophosphoesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ymdB</name>
        <name evidence="3" type="ORF">PPSC2_10260</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56147.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885929.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22730"/>
    <dbReference type="EnsemblBacteria" id="ADO56147">
        <property type="protein sequence ID" value="ADO56147"/>
        <property type="gene ID" value="PPSC2_10260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2162"/>
    <dbReference type="eggNOG" id="COG1692">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_068238_0_0_9"/>
    <dbReference type="OrthoDB" id="1127353at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005235">
        <property type="entry name" value="YmdB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36303">
        <property type="entry name" value="PTHR36303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13277">
        <property type="entry name" value="YmdB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004789">
        <property type="entry name" value="DR1281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00282">
        <property type="entry name" value="TIGR00282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR004789-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR004789-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56147.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="29538" checksum="815F74C9163E2B89" modified="2015-05-27" version="2">MNVLFIGDIVGSVGRKALRENLPLLKSKYNPHVIIVNGENAASGRGITQAIAREFFDWGVHGITMGNHTWDNKEIFDFIDDEPRIIRPANFPPGTPGRGYTVVKGGGKELAIVNLQGRTFLPAIDCPFRAADDIVDELRKKHKHILVDFHAEATSEKIAMGWHLDGRASIVVGTHTHVQSNDDTILPQGTAYQTDAGMVGPYEGVLGMQKEAVLQKFQTQLPVRFQVDMGKWHFHAISVELNDHDGKARKIEKIRLKEDEWRMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHM0</accession>
    <name>E3EHM0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">JEMB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqjZ</name>
        <name evidence="2" type="ORF">PPSC2_10855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370888.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23270"/>
    <dbReference type="EnsemblBacteria" id="ADO56282">
        <property type="protein sequence ID" value="ADO56282"/>
        <property type="gene ID" value="PPSC2_10855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2299"/>
    <dbReference type="eggNOG" id="COG2329">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_127039_1_0_9"/>
    <dbReference type="OMA" id="ITVSYWE"/>
    <dbReference type="OrthoDB" id="1562645at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="34"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12285" checksum="2193EA0D6C023410" modified="2011-01-11" version="1">MSSIAKTPQPPYYAAIFTSERTEGDGGYGKMGDKMVELAAKQPGFLGVESVRDQNGVGITVSYWESLDAIKHWKDNELHKLAQEKGKSDWYKAFGLRVSKVERDYFFTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHQ3</accession>
    <name>E3EHQ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ATP-dependent helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">dinG1</name>
        <name evidence="5" type="ORF">PPSC2_11015</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370921.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23405"/>
    <dbReference type="EnsemblBacteria" id="ADO56315">
        <property type="protein sequence ID" value="ADO56315"/>
        <property type="gene ID" value="PPSC2_11015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2332"/>
    <dbReference type="eggNOG" id="COG1199">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012117_2_0_9"/>
    <dbReference type="OMA" id="PRRAQNY"/>
    <dbReference type="OrthoDB" id="679382at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016818">
        <property type="term" value="F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006139">
        <property type="term" value="P:nucleobase-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006555">
        <property type="entry name" value="ATP-dep_Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045028">
        <property type="entry name" value="DinG/Rad3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014013">
        <property type="entry name" value="Helic_SF1/SF2_ATP-bd_DinG/Rad3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472">
        <property type="entry name" value="PTHR11472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13307">
        <property type="entry name" value="Helicase_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00491">
        <property type="entry name" value="HELICc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51193">
        <property type="entry name" value="HELICASE_ATP_BIND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="4">
        <location>
            <begin position="27"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="655" mass="74361" checksum="DB2F609AAC16DD39" modified="2011-01-11" version="1">MTTYPFAFDPSKPFIEQASDWIADVFYEVLPEVGFEVRDEQIYMAFQLERAYKEKKTIFAEAGVGTGKTLVYLLYAIAYARYMRKPAIIACADESLIEQLVKPEGDIAKLARHLSLTIDARLGKSPDQYICLNKLDEVRSGLDEDADVFRDIYQGLPDFVHFPDTLQSFTPYGNRKEYPELTDGQWSRLGWDVFQDCLVCHQRHRCGQTLSRDHYRKAADLVICSHDFYMEHVWTYEARKREGQLPLLPEHSSVVFDEGHLLETAAQNALTYKLKHTQFESIITRLLEGEVRESLAMTIEDAISQSEVLFAALNKSSQPVQGSNRKEFILNESLIREVNRFGELIGTIEEELVFESGLFSLDEYQVKIVEEHLEMIQTALALFKRPELLISWVTEDQDGLTLVVMPKMVKEILKERVFAQHIPIVFSSATLSVEGSFDYMAQSLGIENPLTFSVASPYDYSDQMQAALYPLQAGHNPIQRALMLLEKSQGRALILFPSQEELTAFQRGLSAYPEASAYRFLYEGSAEISHLISAFQNDEESVLCAVTLWEGLDIPGPSLSHVIIWSLPFPPNDPVFTALRKDAADPFTEIDMPHMALRLRQGIGRLIRSRNDQGWISIMGQDLNRPEVRTQVEQLLPAGVECTIIEGNPEGIKTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHZ7</accession>
    <name>E3EHZ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cheW5</name>
        <name evidence="11" type="ORF">PPSC2_11830</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371094.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24155"/>
    <dbReference type="EnsemblBacteria" id="ADO56489">
        <property type="protein sequence ID" value="ADO56489"/>
        <property type="gene ID" value="PPSC2_11830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2505"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="AHPTMKP"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="285"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="309"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="9">
        <location>
            <begin position="380"/>
            <end position="616"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="666" mass="72787" checksum="E6FD2D8D2CD11DE6" modified="2011-01-11" version="1">MKKFSGEKWKIIRVLSKNFKTKLMVAFIAFLIIPSMIVGALSFESASQQIRNQIEESAEQAIIRTNFIIDSTIEPKLHDAEYFAERLKGNRVETEEQAAKLKELFKQYAALHPEAESIYYGTKDAKLTTYPPKQLPDNYDPRIRPWYDEAIKGNTKTAISSPYLSADSKQMTVTVSRATTDGSGVIGIDLKISGIKETLNNIKVGHEGYAILLDSNHTYIVHPTKVAGAKITDIESRMFQSDTGEYEYEYEGQPKYMNYATNKLTGWKIGGTLYLSEVDEAAQPILFSTLLTIVGCLVIGVIIVYFLIRSIIKPILKLKEQAVNVSAGDLTQDIQVMSKDEIGELGAAFQNMQHNLRSVIQNVGNSADHVALSSNELTISAEQTSAASEQVSQAVQEIASGAEKQTTGLENNSVALDEIAQGITRIAERSTSVADLARRSALQAEEGRKSVEQTGEQMNSIHQSVERSNRMIQTLQARSHEIGEITKVIGDISNQTNLLALNAAIEAARAGDHGKGFAIVADEVRKLAEQSQSSATQIANLIGEIQHETETTVETMDRVTTEVKDGLQISKETIVKLNHAMEGIRETTPQIDDVASIAQQISASVQEIAATASELATIATGNAATSEEVAASSQEQLASMEEISASAQLLSNMAADLKVMVSRFKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI37</accession>
    <name>E3EI37_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flavin-nucleotide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nimA</name>
        <name evidence="1" type="ORF">PPSC2_03650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369341.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16475"/>
    <dbReference type="EnsemblBacteria" id="ADO54705">
        <property type="protein sequence ID" value="ADO54705"/>
        <property type="gene ID" value="PPSC2_03650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.715"/>
    <dbReference type="eggNOG" id="COG3467">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067890_2_0_9"/>
    <dbReference type="OMA" id="FEFTEKM"/>
    <dbReference type="OrthoDB" id="1804797at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024747">
        <property type="entry name" value="Pyridox_Oxase-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12900">
        <property type="entry name" value="Pyridox_ox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="23199" checksum="E515E158784FF999" modified="2011-01-11" version="1">MRRKEFTVAELEEIEQFLSEVSFGFLGMNSEDGFPRVVPLNFAYGNGVFYIHGSRAGEKMERMKEDNRVTFSAAKEYALIPSYFTDEHMACPATSFFKSITVRGHAEHVVDLEEKASAFSIFMSKLQTEGGYDTIDANDSRYASRLKGVALIKIVPEEWTAKFKFGQNVKDQERQQIIDGLQQRGLDDDLITISMMRKYCPHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG3</accession>
    <name>E3EIG3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Carboxylic ester hydrolase</fullName>
            <ecNumber evidence="4">3.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pnbA</name>
        <name evidence="6" type="ORF">PPSC2_06230</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the type-B carboxylesterase/lipase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369907.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19185"/>
    <dbReference type="ESTHER" id="paep6-e0rmc7">
        <property type="family name" value="Carb_B_Bacteria"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55276">
        <property type="protein sequence ID" value="ADO55276"/>
        <property type="gene ID" value="PPSC2_06230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1284"/>
    <dbReference type="eggNOG" id="COG2272">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006586_16_4_9"/>
    <dbReference type="OMA" id="CDHLVAP"/>
    <dbReference type="OrthoDB" id="489066at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004104">
        <property type="term" value="F:cholinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002018">
        <property type="entry name" value="CarbesteraseB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019826">
        <property type="entry name" value="Carboxylesterase_B_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019819">
        <property type="entry name" value="Carboxylesterase_B_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000997">
        <property type="entry name" value="Cholinesterase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00135">
        <property type="entry name" value="COesterase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00878">
        <property type="entry name" value="CHOLNESTRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00122">
        <property type="entry name" value="CARBOXYLESTERASE_B_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00941">
        <property type="entry name" value="CARBOXYLESTERASE_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="COesterase" evidence="5">
        <location>
            <begin position="3"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="COesterase" evidence="5">
        <location>
            <begin position="357"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="3">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="3">
        <location>
            <position position="314"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="3">
        <location>
            <position position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR600997-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="493" mass="53884" checksum="7FEB722ACB3B5BAE" modified="2011-01-11" version="1">MESNTVHTRLGQLRGETENGYHVWKGVPYAQPPVGKLRFHGPQPLEPWEGVRTATSFGPICPQPMPSAESMTGNLVEPPEQSEDCLYLNIWTPASKAPEKGRPVMVWIHGGAFVTGSGIIPLYDGERMAKNGDVVVVTINYRLGPLGFLHLTPKGNGLTSNAGLLDQIAALKWVRDYISAFGGNPDEVTVFGESAGAMSIAALLAMPAAEGLFQRAILQSGASQVLPTAQAEQVAAVYLQQLGVDTQHPERLFTLPTDALMLAMAKTHEVIGPGMAMIYQPVVDGVTLPDVPLSAIAQGSAKQVSVMIGTNLHEGNYFIRKESHLMNKPTARQALEMMTGMSDIGDLIEPFPVTIEEQAQMLTDLIFWRPALALAAAQSAYASVWMYRFDWTLPGHPTFGQAVHGAEIAFVFDNLELLGKLGLEIQPSMQKLAHDMQQAWIAFAREGKPMLPETAWPMYDKQQRATAIFHQNIMVEHDPEGDRRRQLTGQMGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIW7</accession>
    <name>E3EIW7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">rpfC</name>
        <name evidence="14" type="ORF">PPSC2_09505</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370603.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21975"/>
    <dbReference type="EnsemblBacteria" id="ADO55986">
        <property type="protein sequence ID" value="ADO55986"/>
        <property type="gene ID" value="PPSC2_09505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2004"/>
    <dbReference type="eggNOG" id="COG0642">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_104_15_9"/>
    <dbReference type="OMA" id="GWRISAM"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008207">
        <property type="entry name" value="Sig_transdc_His_kin_Hpt_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01627">
        <property type="entry name" value="Hpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50894">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 14" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 9" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Histidine kinase" evidence="11">
        <location>
            <begin position="77"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="12">
        <location>
            <begin position="329"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="domain" description="HPt" evidence="13">
        <location>
            <begin position="474"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="8"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="9">
        <location>
            <position position="379"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphohistidine" evidence="8">
        <location>
            <position position="513"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO55986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="577" mass="64201" checksum="96119DE4181E0018" modified="2011-01-11" version="1">MKEPTAEMAVLRRTVEQLTDEVLKSKAEEEKLLNEFSAMNNELVNLQRQLAKSNAELKRTKEEAIRANDLKSTFLAVVSHEFRTPMNGILGMIEMLASSKLSPDQRQAIGVIRESASLLLNMINNLLDISKVEAGQMELEIGNVRVQAIMSHVAQLLEPQIYQMGNQLSIETDPGVAEHLEGDSARIMQILLNLLNNANKFTSEGNLVVRTKLVEETKDSQRVRFEVQDSGIGISPEDQDKLFQPYVQAGEGGASQYGGTGLGLWICSSFVKLMQGEIGVVSEEGQGSTFWFEIPFRKASGQADKIEKHENGELTARSELLREHIHSQVILVAEDNRMNRQVVQLQLNHLGFQHIDFAEDGQAAVRAASERSYACILMDHHMPLLNGHDATKAIRQWEVENQQPPVTIISLTGNVSEEDQARGREVGVNDYLTKPVTIENLSEKLVKWLPVPESEPILDEDVIREIMLLDEDGSTGLLESLVEMYTSDTPAKINKLKELVAAGEATKVVEAAHELKSGSVSLGVGRLSKLLSDIEQLARENRLENTQVKLSALQSVYQATCLELERYIHQSRLIPPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIY5</accession>
    <name>E3EIY5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rhaS8</name>
        <name evidence="3" type="ORF">PPSC2_09595</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370621.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22060"/>
    <dbReference type="EnsemblBacteria" id="ADO56004">
        <property type="protein sequence ID" value="ADO56004"/>
        <property type="gene ID" value="PPSC2_09595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2022"/>
    <dbReference type="eggNOG" id="COG4977">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="MEQNYAS"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="176"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="31923" checksum="C9F045D58322C9E5" modified="2011-01-11" version="1">MILTPHHLRFFLTTREHSLPLFIESIGFNSRQEDVSRPEGYPCFHWIQTVSGEGMFTYKGGTFRLGEQSGVLLLPGEAHAYRRATKVWRTLYITFDGPIAAAVLTALELKHTRGYHWDPDSELHSFGENMLHSMVSERDLSGLDASANMYRFLTLLRKHGQHSSMPSLSHNVERLTPVLTFMEQNYASPDVGLRDMAVMMNVSARHLNTLFKQAFGVTSYAYLIVIRLRKAKEMMTEYPQLTVKEISERVGFRDVSHFVATFRRAEGITPERFKILYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIZ7</accession>
    <name>E3EIZ7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_10400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370785.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22865"/>
    <dbReference type="EnsemblBacteria" id="ADO56178">
        <property type="protein sequence ID" value="ADO56178"/>
        <property type="gene ID" value="PPSC2_10400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2192"/>
    <dbReference type="eggNOG" id="ENOG50341B9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_993378_0_0_9"/>
    <dbReference type="OMA" id="HCTNERV"/>
    <dbReference type="OrthoDB" id="1625422at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="280" mass="31377" checksum="807F642476A49900" modified="2011-01-11" version="1">MLTFQASKQKLITLKAKELFFLAGVLGSDRLLGVEDPFKGYLAEELAEEWEQVKAALLEKGYLKQADKGKELAMPPTVFSRVAIAGLSNRACRIRYVRGGKQFEGYLHCTNERVVELVKSVDEPDEYRLYDLGNVEKACETLIDKMGWVDRLVPESPALMFSKQAFNKIYEQSAGESLSQISSKLTEASGDEEGAMRLAQSLSSRVAEGELQLLVWNGREWESQRAAFVLCPAMNWIFRMSSAGNGDWLIAAMASREQFVDLLLNWLKQSAVTEEVTEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ81</accession>
    <name>E3EJ81_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvfD</name>
        <name evidence="2" type="ORF">PPSC2_11275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370973.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2396"/>
    <dbReference type="EnsemblBacteria" id="ADO56368">
        <property type="protein sequence ID" value="ADO56368"/>
        <property type="gene ID" value="PPSC2_11275"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11275"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2385"/>
    <dbReference type="eggNOG" id="COG0110">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081811_1_1_9"/>
    <dbReference type="OMA" id="TIGHDCI"/>
    <dbReference type="OrthoDB" id="1878940at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03360">
        <property type="entry name" value="LbH_AT_putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041561">
        <property type="entry name" value="PglD_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020019">
        <property type="entry name" value="Sia_OAcTrfase_NeuD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17836">
        <property type="entry name" value="PglD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03570">
        <property type="entry name" value="NeuD_NnaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PglD_N" evidence="1">
        <location>
            <begin position="3"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="213" mass="22999" checksum="24141F5D9E7D8D94" modified="2011-01-11" version="1">MRKIVIWGSGGHAREINWLCEELGVKVAGFLDERPEMKGQIVNGVPVLGTLNDIEALKYEVELICAGVGDPALKKRFVNNTIQLGFRIAAPLIHPRIRLSRRNTIGEGSMVFEGAVLSDNIKIGQHVIINRSVNVSHDAVIGDYVTIAPGVNLAGNVTIDEGAYIGIGASVREKRHIGCWSMIGGGAFVKEDIPEFSMAAGVPAVVKKQLDMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJA1</accession>
    <name>E3EJA1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Multidrug ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">macB1</name>
        <name evidence="9" type="ORF">PPSC2_11365</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370993.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23725"/>
    <dbReference type="EnsemblBacteria" id="ADO56388">
        <property type="protein sequence ID" value="ADO56388"/>
        <property type="gene ID" value="PPSC2_11365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2404"/>
    <dbReference type="eggNOG" id="COG0577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_8_0_9"/>
    <dbReference type="OMA" id="MGSNMIT"/>
    <dbReference type="OrthoDB" id="768211at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025857">
        <property type="entry name" value="MacB_PCD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12704">
        <property type="entry name" value="MacB_PCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="279"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="324"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="368"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="MacB_PCD" evidence="8">
        <location>
            <begin position="21"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="7">
        <location>
            <begin position="309"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF12704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="403" mass="43468" checksum="B587C45F449D072B" modified="2011-01-11" version="1">MKFQEIIRVSLNSLRTNMLRSLLTMVGIIIGVAAVIAIVAIGKGSTATITSQINSMGNNLLMIYPYAPYDGSSSMSFNQTKGISLEDIEALEQQKAVAEVAPSAMTNADITWSRNKVSGQIEGTSLGFVHVRKLSLAQGRSFTHYEVDKRLNVAVLGSDAARNIFGPDASKAVGEIIMIKQLPFKVVGVLANSNSNMNNSGQQVYVPITTGMERLGNMSIQQVNASATTEDKIDQASAQIRQVLRVRHELKPSEGDDFQIMTQTEILKTVSGVDRVMNMLLIGVAAIALGVGGVGIMNIMLVSVTERTREIGIRKAIGAQRSDIMLQFVAEAVFLSLMGGLVGVMVGLGGAKLLEKFVQMPIVYSIEPVLYSFLCCMGVGVLFGVYPARKASKLRPIDALRYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJL4</accession>
    <name>E3EJL4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YyaS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yyaS</name>
        <name evidence="2" type="ORF">PPSC2_12200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371168.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2594"/>
    <dbReference type="EnsemblBacteria" id="ADO56564">
        <property type="protein sequence ID" value="ADO56564"/>
        <property type="gene ID" value="PPSC2_12200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2579"/>
    <dbReference type="eggNOG" id="COG2364">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083843_0_1_9"/>
    <dbReference type="OMA" id="VIDHLFV"/>
    <dbReference type="OrthoDB" id="1009891at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038750">
        <property type="entry name" value="YczE/YyaS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40078">
        <property type="entry name" value="PTHR40078"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="144"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="214" mass="23484" checksum="FA24A8CD4D3C5532" modified="2011-01-11" version="1">MKYVFFVIGIFILSLGISFTIQSDLGTSPFDALLVGLSTNVGLTVGSWEIIMALILICCNSLLNRQRPEVLGLLTAFITGIGIDMWLFLLQDVLTPELWYSKVVCFGIGLIAVGLGTATYLQTNFAPIPVDRLTIIVQELTRTNLFFSRTFIYLIFLVIAFILNGPIGIGTLLTVGLGGLILNYFMPLTGKVLDRILTHSGTSPNHDKDKKHSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJN7</accession>
    <name>E3EJN7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386049.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0243"/>
    <dbReference type="EnsemblBacteria" id="ADO59635">
        <property type="protein sequence ID" value="ADO59635"/>
        <property type="gene ID" value="PPSC2_26960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5700"/>
    <dbReference type="HOGENOM" id="CLU_2118659_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="13060" checksum="D3DB8CD81DA8A916" modified="2011-01-11" version="1">MEFNLDEYQRGNGKRYVCNDYKGFKIIVVVASQANLQKGLGGGSIKSLIMHPLSGKFISYDYSNGNWQNGYIPPEEIRSIVEDIVRYFDSEITMDWNHEAKKIKTLPRGTKHIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJZ9</accession>
    <name>E3EJZ9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ATP-dependent DNA helicase RecG</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_28090</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="6 7">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
            <plasmid evidence="6 7">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the helicase family. RecG subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60018.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0629"/>
    <dbReference type="EnsemblBacteria" id="ADO60018">
        <property type="protein sequence ID" value="ADO60018"/>
        <property type="gene ID" value="PPSC2_28090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5955"/>
    <dbReference type="eggNOG" id="COG1200">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_005122_7_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045562">
        <property type="entry name" value="RecG_dom3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033454">
        <property type="entry name" value="RecG_wedge"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19833">
        <property type="entry name" value="RecG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17191">
        <property type="entry name" value="RecG_wedge"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0347">Helicase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0614">Plasmid</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="4">
        <location>
            <begin position="203"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="5">
        <location>
            <begin position="390"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO60018.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="606" mass="68947" checksum="3C694D7F89568B45" modified="2015-05-27" version="2">MQEIKRYEKKFIKVKVSDDSGGVLHVIWFHKPYVHKWLKEGETYIFCGKVQEDLKFRSKNMVNPLYFSHEIKHLQRLVPVYPKIRGMADEYLMNSIQSSLSVMSQQENLEPSVLATFGLLKSGKALKAIHQPENEDELERAKTRFIFDDLFEYSMQMHQYESLSSSKSPFLMNQFSVVTDFMRRLPFELTDGQREVLRSISLKAKLGQRVNALVQGDVGCGKTIVAILLMVVAAENGFQSALMAPTHVLAKQHYEELAERLKGTSFKVAFLTGDTKIREKKAILNGLDTGEIHMIVGTHSIIGKDVKIPNLALSIVDEEHRFGVVQRNQLREKARQGVHHISMSATPIPRTLALAMWGDQVDVYTIKTLPKGRKPVRTVLLSDEKRCFNGIEQQIEKGHQAYVVCPLIEDSESESMSDVDSVEKTFEKMKQHFSRNPKVKISLISGKMKPAEIAEEILRFTRNETNVLISTTIIEVGVNVPNATMMVVKNAERFGLAQLHQLRGRVGRGNFESFCVLHSEKEGNPKLQAMVETTDGFKIAKRDLELRGTGDFIGTKQSGDNNYVMLMMANMDLYLRVKEEVRAIHNDPRRLSFYKYLNVLSYEEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK39</accession>
    <name>E3EK39_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386162.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0357"/>
    <dbReference type="EnsemblBacteria" id="ADO59748">
        <property type="protein sequence ID" value="ADO59748"/>
        <property type="gene ID" value="PPSC2_26440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5574"/>
    <dbReference type="HOGENOM" id="CLU_2772066_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="8157" checksum="0C3A3EB643B03B0F" modified="2011-01-11" version="1">MRKRKAIQMADQKGYETGLQHFVIWDPETIREAFTFSGYQVKSEKEMIEDYGSVEECLLYIAYLTRQVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK98</accession>
    <name>E3EK98_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Folylpolyglutamate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_27935</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="8 9">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
            <plasmid evidence="8 9">pSC2</plasmid>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the folylpolyglutamate synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385839.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0031"/>
    <dbReference type="EnsemblBacteria" id="ADO59425">
        <property type="protein sequence ID" value="ADO59425"/>
        <property type="gene ID" value="PPSC2_27935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5919"/>
    <dbReference type="eggNOG" id="COG0285">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015869_1_2_9"/>
    <dbReference type="OMA" id="KCDYAVI"/>
    <dbReference type="OrthoDB" id="1232874at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004326">
        <property type="term" value="F:tetrahydrofolylpolyglutamate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001645">
        <property type="entry name" value="Folylpolyglutamate_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018109">
        <property type="entry name" value="Folylpolyglutamate_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11136">
        <property type="entry name" value="PTHR11136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001563">
        <property type="entry name" value="Folylpolyglu_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01499">
        <property type="entry name" value="folC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01011">
        <property type="entry name" value="FOLYLPOLYGLU_SYNT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0614">Plasmid</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase_M" evidence="7">
        <location>
            <begin position="57"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="6">
        <location>
            <begin position="309"/>
            <end position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR001563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="458" mass="50581" checksum="BB7A6B74E0AAC541" modified="2011-01-11" version="1">MSDTIRGSEAAPLQSYDEAVEWINGLIPFGIRPGLERIEQLMSRLGDPQRHLKFIHIAGTNGKGSTCAFLTSVLLKCGYDVGTFTSPYITRFTNRFQFNGTDIPDETLVSLANRLYPLVKEIADSELGSPTMFEVSTALAILYYATVAFPDVVVWETGLGGRMDVTNIVNPIVSIITNVGYDHTDILGDTLEQIAGEKAGIIKPGVPVVSCASQPEAIQVIRETAAKQGSTLYLAGERFAYERLRGDETGQTFSFIGPFRQMKIDITMLGDHQCSNAAGAMMALEVLRQYMAFVLDDEELLEGFRQTAWAGRFEQVSTSPRIVLDGAHNPEGAQTLAKSLPQVYSYKKLVLMMGMLSNKHHEAYLQHILPLVDVLILTEPDFRRKMNAAELAHHVEKLQPSYAKTDLKIIVEGDWKKALSLLQSHTEAEDLGVVSGSLYLIADVRATLMDQTDSEKGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKF9</accession>
    <name>E3EKF9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386205.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0401"/>
    <dbReference type="EnsemblBacteria" id="ADO59791">
        <property type="protein sequence ID" value="ADO59791"/>
        <property type="gene ID" value="PPSC2_26205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5518"/>
    <dbReference type="HOGENOM" id="CLU_2424191_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="10430" checksum="B62363A3F2BE80FA" modified="2011-01-11" version="1">MKTTTVKKRMIQCILASVGFILLIFMHLNQTYERITFPMDGWVVFLVAISLIILSLIAWKKLNTSYSTFGYPLWFGMFVGSIIGKIFTNSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKH7</accession>
    <name>E3EKH7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386223.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59809">
        <property type="protein sequence ID" value="ADO59809"/>
        <property type="gene ID" value="PPSC2_26115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5499"/>
    <dbReference type="eggNOG" id="ENOG503066B">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_634379_0_0_9"/>
    <dbReference type="OrthoDB" id="1832137at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="427" mass="49603" checksum="B5785AF81C0FA79F" modified="2011-01-11" version="1">MRTITELQETILCHNCGEIVIVFFEKYGYKLVEMLPECVKKEHDGIEGLCCACCDEEIQVMDNYYIFTVGDEIIDEIADRVGEDMGGCEHCEGEKRWNLVNAYNNDPYDKSSRMDSPEGMSISAYLYDQDVPEELFQILCTHIQCKCSYGRESGHSDDFYGGIFDLNDEIYTKRDIEDYWGFKYEAFSEFSQQYEETIEVEALHQFKTHLSHYPMLALEHKTGRAIYRTLKKHFDAKGYTVLTNGLAKLYRGRTRRMDTSVPLEKHQMWAPPVGLPQHGRYNCVGIPVLYVTDCLESIPYEIHPTHEDIIDIGEFRITKDELFIFDLGSFEPTFQGFFNEMNEETKLVKEAYLLPNFIGTCCSYIGYHGIKYEGVHGEKLSYTNYALFNIESEEDIKINNIISYKPQFTIEMKEISKLPYSTLDSEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKM5</accession>
    <name>E3EKM5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3 4">Single-stranded DNA-binding protein</fullName>
            <shortName evidence="2">SSB</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_25915</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="6 7">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
            <plasmid evidence="6 7">pSC2</plasmid>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386271.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0468"/>
    <dbReference type="EnsemblBacteria" id="ADO59857">
        <property type="protein sequence ID" value="ADO59857"/>
        <property type="gene ID" value="PPSC2_25915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5444"/>
    <dbReference type="eggNOG" id="COG0629">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078758_6_2_9"/>
    <dbReference type="OMA" id="SGSVKCR"/>
    <dbReference type="OrthoDB" id="1942216at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04496">
        <property type="entry name" value="SSB_OBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00984">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000424">
        <property type="entry name" value="Primosome_PriB/ssb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011344">
        <property type="entry name" value="ssDNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10302">
        <property type="entry name" value="PTHR10302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00436">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002070">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00621">
        <property type="entry name" value="ssb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50935">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2" id="KW-0234">DNA repair</keyword>
    <keyword evidence="2" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1 2 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0614">Plasmid</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="105"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Important for interaction with partner proteins" evidence="2">
        <location>
            <begin position="152"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="109"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR002070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="17396" checksum="7ECFC4177C42A00B" modified="2011-01-11" version="1">MLNRVILIGRLTKDPELRYTPSGVAVTQFTLAVDRPFTSQGGEREADFLPIVTWRQLAETVANYTHKGNLVAIEGRIQVRNYDNNEGKRVYVTEIVADNVRFLEGKRNSEGGNSAQGASNSSYSNNNNSSSSRQNQTPDPFSDDGKPIDISDDDLPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKW0</accession>
    <name>E3EKW0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386279.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59865">
        <property type="protein sequence ID" value="ADO59865"/>
        <property type="gene ID" value="PPSC2_25865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5434"/>
    <dbReference type="HOGENOM" id="CLU_2586436_0_0_9"/>
    <dbReference type="OrthoDB" id="2206069at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="80" mass="9201" checksum="6292A4DF1769B2DD" modified="2011-01-11" version="1">MEKMCGLCSQEAGMIIEDRIELALSRVPRVIYKCPICENNHSLHWIPGDLKRKTVQEISSNQAKSVNGKKRTREEQLTLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKY0</accession>
    <name>E3EKY0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Crystallin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59885.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0496"/>
    <dbReference type="EnsemblBacteria" id="ADO59885">
        <property type="protein sequence ID" value="ADO59885"/>
        <property type="gene ID" value="PPSC2_25540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5414"/>
    <dbReference type="eggNOG" id="COG1397">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024566_8_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.4080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005502">
        <property type="entry name" value="Ribosyl_crysJ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036705">
        <property type="entry name" value="Ribosyl_crysJ1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03747">
        <property type="entry name" value="ADP_ribosyl_GH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101478">
        <property type="entry name" value="SSF101478"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59885.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="34522" checksum="F8453DF736A17AB0" modified="2015-05-27" version="2">MGLAVGDALGVPAEFKKRDSYTLIVDMIGFGTHNQPPGTWSDDTSMTLCLIENLIDGYNREQLKQIFVNWYYYGHWTPDGKLPFDIGASTFKVLSKIKAGVLAPEAETGAADEMSNGNGSLMRVLPLSFYLKDTNETDKFSIIEEVSGITHAHIRSKLACGLYVEIAIHLIKGLSPIDSYQKARLSVYDHYKERVAMNEFDRFHRIFKEDISEYLRDQIKSTGYVIDTLEASLWRFLKGHSFEDTVLLAVNLGEDTDTIGALSGGLAGIYYGLQNIPQKWVNELARHDEIEQLCQLFYNQLSAQLST</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKZ0</accession>
    <name>E3EKZ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28685</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386309.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0506"/>
    <dbReference type="EnsemblBacteria" id="ADO59895">
        <property type="protein sequence ID" value="ADO59895"/>
        <property type="gene ID" value="PPSC2_28685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6087"/>
    <dbReference type="HOGENOM" id="CLU_1114944_0_0_9"/>
    <dbReference type="OrthoDB" id="1251304at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="249" mass="29605" checksum="E1777F6575B9DDDB" modified="2011-01-11" version="1">MWSQLVRRIHNYIQERLRDLKIHLYPLQIQLGGIRYVRVARIANEGFNIKPFKDVNIFLHTGGFIQKKINTLDDYYESVAEEQVVEADPQNVLIEGCHCFIYKFNANQAKKGGNLPFRVHHKVNIAYLPENEWIWVSNCTPTFTRYVGEITHVVEDPLTSKPYTFTKRYSNKLDWVKMRAYLAIQRTDEHLKTSNTVQEAISEFYITKNQMDQVVFLNKMQLLTYYYLKGKENSLKYFSERLRRYLGEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL73</accession>
    <name>E3EL73_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PlsC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_28640</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="4 5">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
            <plasmid evidence="4 5">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386319.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0516"/>
    <dbReference type="EnsemblBacteria" id="ADO59905">
        <property type="protein sequence ID" value="ADO59905"/>
        <property type="gene ID" value="PPSC2_28640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6078"/>
    <dbReference type="eggNOG" id="COG0204">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0318">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_59_8_9"/>
    <dbReference type="OMA" id="MLNAMPM"/>
    <dbReference type="OrthoDB" id="961884at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0614">Plasmid</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PlsC" evidence="3">
        <location>
            <begin position="27"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="699" mass="78872" checksum="94B2AEC3B7A24859" modified="2011-01-11" version="1">MIPIALLKTFIKCDIFHKERLQNNTPCIYMPNHTSLLDAVLLSMHLPKDVVFVANTMIASRYSWALQGRETISVDPMNPYSIRSMIKVLRSGKSLVIFPEGRITITNSLMKVYPGVGYISIKTGAALIPIAIDGGEKAKKLTYLEGQIPTQWFPRTTLYIGKPFHLPEMEGLLMREKKEWGSHLIYRKLQETLLKCRMLKSEHLAEVLRKRVQEAPDMVIAEDPTGKMTMKKLWQSTIGISYLLDRRLRDEERLGLLLPTSIAGMVGLFATIYSGRTPAMLNASMDIDTFCTCLRIGEIKTILTSRTFIEKGRLEYLIEAISKEVQIMYFEDLIDEINGLLKLKVLFKERHRITSPTHDILLFTSGSEGTPKGVLLTHRNIYANIQQSRLMVDLTSEDRIMNALPMFHSFGLILTFLSPLCHVPIYMIPSPLMYKAIPEWTYDRKGTILFGTSTFLAAYGRYAHPYDFHRLRYVYAGAEKLQESVKSLWFEKFGIRVLEGYGLTETAPILALQTPMLYKSGSVGCLVPGVKHRIEPVEGVSEGGRLQIQAPNLMRGYLMAEEGFVPAPEWFDTGDIVKLDDKGFVEILGRAKRFVKIGGEMVSLAVVEHHAKQAIGEGTVVAVSLKDERKGERIELVATSEQATKEKIRLYWRANNVSPLALPSTVHVIKEIPLLGSGKADIAKVNEYIQRLHVKGEPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL89</accession>
    <name>E3EL89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386335.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0532"/>
    <dbReference type="EnsemblBacteria" id="ADO59921">
        <property type="protein sequence ID" value="ADO59921"/>
        <property type="gene ID" value="PPSC2_28565"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28565"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6061"/>
    <dbReference type="HOGENOM" id="CLU_2438064_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11334" checksum="0F5CCCDB6BB3A502" modified="2011-01-11" version="1">MIFEYFKNYELNHILTKLLSGTDTSIRCEIGFSEKLDTDCVNIYKNGQLVDTKKMEAIFEPLSVHINAKIKSYDVMEVGDDGEVFVFFLEGLHTFTNVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL90</accession>
    <name>E3EL90_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386336.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59922">
        <property type="protein sequence ID" value="ADO59922"/>
        <property type="gene ID" value="PPSC2_28560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6060"/>
    <dbReference type="HOGENOM" id="CLU_2539435_0_0_9"/>
    <dbReference type="OrthoDB" id="2008275at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="23"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="9456" checksum="6907BEC9E4E72117" modified="2011-01-11" version="1">MSTVANDVHEIYKTDMIKFGYWVEAKRKELKFSLDDLANKTGIDKSYLARLERGDRSNPSFIAVYSLTKCLGGNLDDIITHQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCA1</accession>
    <name>A0A0D5ZCA1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Nitrite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nasE3</name>
        <name evidence="6" type="ORF">PPSC2_15725</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014600038.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03420"/>
    <dbReference type="EnsemblBacteria" id="AKA44273">
        <property type="protein sequence ID" value="AKA44273"/>
        <property type="gene ID" value="PPSC2_15725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3356"/>
    <dbReference type="eggNOG" id="COG2146">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055690_5_1_9"/>
    <dbReference type="OrthoDB" id="1681886at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012748">
        <property type="entry name" value="Rieske-like_NirD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02378">
        <property type="entry name" value="nirD_assim_sml"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="5">
        <location>
            <begin position="10"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="AKA44273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12011" checksum="94D4E7E8D13FCFC0" modified="2015-05-27" version="1">MESNTITSRIRIADLNEIDQRGARTVRILNTEIAVFRLSDGSVRALENRCPHKGGRLSEGMICGSVVHCPLHDWKVDLSTGQVRDPDTGCVTTYPTEIDSENGAVFIII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCA9</accession>
    <name>A0A0D5ZCA9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599600.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20700"/>
    <dbReference type="EnsemblBacteria" id="AKA44214">
        <property type="protein sequence ID" value="AKA44214"/>
        <property type="gene ID" value="PPSC2_08070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1698"/>
    <dbReference type="HOGENOM" id="CLU_137811_0_0_9"/>
    <dbReference type="OrthoDB" id="1952769at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024307">
        <property type="entry name" value="YmaF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12788">
        <property type="entry name" value="YmaF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="13495" checksum="95A6563032B4FCF2" modified="2015-05-27" version="1">MQKNKPVVKKKTISSKQTQRHVHEFEGSTKLAEEGADRHNHRFAGVTGQAIRVGRSHVHEIDLTKTDFVNHFHNLRRIRTGPAIPVGNGKHVHFVTGQTTLNDGHVHQFNFATLIEAPLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCB0</accession>
    <name>A0A0D5ZCB0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675269.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44206">
        <property type="protein sequence ID" value="AKA44206"/>
        <property type="gene ID" value="PPSC2_07725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1602"/>
    <dbReference type="HOGENOM" id="CLU_198295_0_0_9"/>
    <dbReference type="OrthoDB" id="1978427at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13443">
        <property type="entry name" value="HTH_26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="10"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00530"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="8746" checksum="D5AB516E0C98680E" modified="2015-05-27" version="1">MKPKFTLTCNLDKILKEKDITPYKLSKETGERIGTIYKLVNNQDLDNSRLSTSMMANICGYLGIGLGELFEIAEETGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCH1</accession>
    <name>A0A0D5ZCH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ytxJ</name>
        <name evidence="1" type="ORF">PPSC2_15625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014600036.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03275"/>
    <dbReference type="EnsemblBacteria" id="AKA44271">
        <property type="protein sequence ID" value="AKA44271"/>
        <property type="gene ID" value="PPSC2_15625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3336"/>
    <dbReference type="eggNOG" id="COG3118">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_153787_1_0_9"/>
    <dbReference type="OrthoDB" id="1740395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022551">
        <property type="entry name" value="BrxC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11009">
        <property type="entry name" value="DUF2847"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04019">
        <property type="entry name" value="B_thiol_YtxJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12476" checksum="41CA469DDCA3B4D5" modified="2015-05-27" version="1">MATMTKMTTIQQLNTALEASSDKPLLLFKHSTRCPISAGAYQEVESYLEGAPDENIEYGIIYVVEDRPVSNAASDKLQVKHESPQAILVKDGEAVWHTSHSNITARALHDHLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCK4</accession>
    <name>A0A0D5ZCK4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886219.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44343">
        <property type="protein sequence ID" value="AKA44343"/>
        <property type="gene ID" value="PPSC2_26090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5491"/>
    <dbReference type="HOGENOM" id="CLU_2438063_0_0_9"/>
    <dbReference type="OrthoDB" id="2101518at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10624" checksum="CF13D416675BC623" modified="2015-05-27" version="1">MKKCPKCRDELEKVTEDVYRCPECDYVSKCPDCRGELYAIEDGVYGCDCGYMTDPYFDPTPDYDINEEDQDERYEKLQRDAEKAFERFGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCT6</accession>
    <name>A0A0D5ZCT6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886161.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44384">
        <property type="protein sequence ID" value="AKA44384"/>
        <property type="gene ID" value="PPSC2_27535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5830"/>
    <dbReference type="HOGENOM" id="CLU_2205291_0_0_9"/>
    <dbReference type="OrthoDB" id="1855186at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038763">
        <property type="entry name" value="DHH_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64182">
        <property type="entry name" value="SSF64182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10676" checksum="456D98BF7B3DAF63" modified="2015-05-27" version="1">MVKLLKKQDVDITPFRYHPDLYGISDLTLKILVSRGFKTPDEIKHFMYGGIKDLHDPRTMKDTLIAVEIIIEAIRNGEFIVVYGDYDCGATRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4B4</accession>
    <name>E3E4B4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371258.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56654">
        <property type="protein sequence ID" value="ADO56654"/>
        <property type="gene ID" value="PPSC2_12605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2677"/>
    <dbReference type="HOGENOM" id="CLU_069356_17_2_9"/>
    <dbReference type="OrthoDB" id="2047542at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="15623" checksum="CBBABB6102007365" modified="2011-01-11" version="1">MEIVSEECQPLFDEVQAYLSQSKDVIPLEQLYQVIVSYVSFLESKVPWLCAVSRASTGHRPLHSPLCQWMRTTCRYLYNEASAKGDISDVDIVYTVEALLATLHNIDFHLKDEGLSTKQILKGIRRLYIDGLKASKSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4D1</accession>
    <name>E3E4D1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">YrbG1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yrbG1</name>
        <name evidence="8" type="ORF">PPSC2_12670</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UPF0702 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371275.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2704"/>
    <dbReference type="EnsemblBacteria" id="ADO56671">
        <property type="protein sequence ID" value="ADO56671"/>
        <property type="gene ID" value="PPSC2_12670"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12670"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2693"/>
    <dbReference type="eggNOG" id="COG2323">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2260984_0_0_9"/>
    <dbReference type="OrthoDB" id="1884218at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.240.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007353">
        <property type="entry name" value="DUF421"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023090">
        <property type="entry name" value="UPF0702_alpha/beta_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04239">
        <property type="entry name" value="DUF421"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="11315" checksum="1D9B69CD36B01C63" modified="2011-01-11" version="1">MIGVPSVVIKDGEMMLKEIKKAKLTTGEVEVSLRQNKVGNIKDVDLAIFESNGKLSTILNNEQAAATKKDIQMTLDVLANNGFRIPEEKITEGKTAPLFERSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G7</accession>
    <name>E3E4G7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yrkC</name>
        <name evidence="2" type="ORF">PPSC2_13605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371469.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01295"/>
    <dbReference type="EnsemblBacteria" id="ADO56866">
        <property type="protein sequence ID" value="ADO56866"/>
        <property type="gene ID" value="PPSC2_13605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2895"/>
    <dbReference type="eggNOG" id="COG0662">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090569_1_0_9"/>
    <dbReference type="OMA" id="GQGIVKM"/>
    <dbReference type="OrthoDB" id="1928636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="82"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="20915" checksum="E46D6E1C421C7DFA" modified="2011-01-11" version="1">MYPKSCHHFPWHIPMYNSCNYNYRSYNPQYYNWYNNDSNLNEKIILRDYGQSPFVVNIDQAANQNKNYRTAIWTGKHFQVTLMSINVGDDIGLEAHPTTDQFIRIEEGQALVQMGDRKDKLDYQVMAYDDYAIMIPAGKWHNVINTGNTPLKIYVIYAPPEHPFGTVHETKEIAMSAER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4V2</accession>
    <name>E3E4V2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Flavin prenyltransferase UbiX</fullName>
            <ecNumber evidence="5">2.5.1.129</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">ubiX</name>
        <name evidence="7" type="ORF">PPSC2_14615</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>dimethylallyl phosphate + FMNH2 = phosphate + prenyl-FMNH2</text>
            <dbReference type="Rhea" id="RHEA:37743"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:87467"/>
            <dbReference type="ChEBI" id="CHEBI:88052"/>
            <dbReference type="EC" id="2.5.1.129"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the UbiX/PAD1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.129" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371677.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02265"/>
    <dbReference type="EnsemblBacteria" id="ADO57080">
        <property type="protein sequence ID" value="ADO57080"/>
        <property type="gene ID" value="PPSC2_14615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3118"/>
    <dbReference type="eggNOG" id="COG0163">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074522_0_1_9"/>
    <dbReference type="OMA" id="GATHIQD"/>
    <dbReference type="OrthoDB" id="1384786at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106141">
        <property type="term" value="F:flavin prenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01984">
        <property type="entry name" value="ubiX_pad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036551">
        <property type="entry name" value="Flavin_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003382">
        <property type="entry name" value="Flavoprotein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004507">
        <property type="entry name" value="UbiX-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43374">
        <property type="entry name" value="PTHR43374"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02441">
        <property type="entry name" value="Flavoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52507">
        <property type="entry name" value="SSF52507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00421">
        <property type="entry name" value="ubiX_pad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 5" id="KW-0288">FMN</keyword>
    <keyword evidence="1 5" id="KW-0637">Prenyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Flavoprotein" evidence="6">
        <location>
            <begin position="11"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="19"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="106"/>
            <end position="109"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="171"/>
        </location>
        <ligand>
            <name>dimethylallyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:88052"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>dimethylallyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:88052"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="24183" checksum="3261492C0A90D25B" modified="2011-01-11" version="1">MNNQVSNHQGKRIVIGITGASGSIYGVRLVETLLDLQYTVHLIVSNAGWRVLKEELGWNVTDREGALNEQFGDRPGSLVYHPFTDIGASIASGSYLVDAMIIMPCSMGTLSAVAHGSSDNLMARAADVMMKEGRPLILVPRETPLHAIHLENMLKLARLGVKMIPAMPAFYFHPKTLDDIVLFLVGKVLDSLRIEHQLFTRWGDSDADTGHQDNHNRKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4V5</accession>
    <name>E3E4V5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Heptaprenyl diphosphate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hepS</name>
        <name evidence="1" type="ORF">PPSC2_14630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371680.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02280"/>
    <dbReference type="EnsemblBacteria" id="ADO57083">
        <property type="protein sequence ID" value="ADO57083"/>
        <property type="gene ID" value="PPSC2_14630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3121"/>
    <dbReference type="eggNOG" id="COG0142">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_962595_0_0_9"/>
    <dbReference type="OMA" id="VEYDMIQ"/>
    <dbReference type="OrthoDB" id="1740654at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009234">
        <property type="term" value="P:menaquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009920">
        <property type="entry name" value="HEPPP_synth_su1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07307">
        <property type="entry name" value="HEPPP_synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="33601" checksum="EC52B44C1F05C331" modified="2011-01-11" version="1">MKPYRVPQLARKYVEYDMIQQHTEMPAFPDSRTRLLFEFLNRNAQGLHASEDELYALVTSLVQMGLDTHDMIDTLSGIRSPEEMRSRQLKVLAGDYFSSRFYQLLALAGRIEAISKLSDAVCEVNAGKMSLYWEMKHFRLDAAQYLSQMVCFKQELFLSLTSLIAEQDQEVWKQLLNEFALCDTLVEEWEKRAEPDKSRFGYMFWHIYGNGDQHEQALLSEGGTETEVWRKLVLKYKAEDAILDKLRTAVTHIRQTLSDEQNTGIEEFECMLEPFLKLLHSSHPVVREG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y7</accession>
    <name>E3E4Y7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Stage III sporulation protein AB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">spoIIIAB</name>
        <name evidence="1" type="ORF">PPSC2_15145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371786.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02765"/>
    <dbReference type="EnsemblBacteria" id="ADO57195">
        <property type="protein sequence ID" value="ADO57195"/>
        <property type="gene ID" value="PPSC2_15145"/>
    </dbReference>
    <dbReference type="GeneID" id="66576955"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3232"/>
    <dbReference type="eggNOG" id="ENOG5032S0Q">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120887_1_2_9"/>
    <dbReference type="OMA" id="AKMWSYL"/>
    <dbReference type="OrthoDB" id="2031603at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014198">
        <property type="entry name" value="Spore_III_AB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09548">
        <property type="entry name" value="Spore_III_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021435">
        <property type="entry name" value="SpoIIIAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02833">
        <property type="entry name" value="spore_III_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="19498" checksum="FFE2485B1E22111C" modified="2011-01-11" version="1">MLKLLGAVLVILATTLAGWQRARQFAMRPRQIRELILALQRLTTEVSYGVSPLPDAFAKTGEPLREPLRSLFQQASRWMHPSFGLTARESLHKAIEVSWSRSSMKQAEKEAMRQLAYSLGTSDREDQIKHIALTIQQLSHEEAQAQADQVRYERMSRSLGLLIGALIVILIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E560</accession>
    <name>E3E560_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372006.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3464"/>
    <dbReference type="EnsemblBacteria" id="ADO57420">
        <property type="protein sequence ID" value="ADO57420"/>
        <property type="gene ID" value="PPSC2_16215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3463"/>
    <dbReference type="eggNOG" id="ENOG5033WYN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1977340_0_0_9"/>
    <dbReference type="OMA" id="KATEHEF"/>
    <dbReference type="OrthoDB" id="1905525at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="142" mass="16218" checksum="AB4CE1A28DA457AD" modified="2011-01-11" version="1">MSSQQSQDRLQKYLAKAKEGQKDDIITVQADGEDWSVKRLKTLDVRRSYDLALDEDGNYKSPYFNEIDVMIVKATEHEFDWNNKDLMLAYGATSKFELPPRILDNTDDYAVLSKAVRNFKETQDSLLNDAKNSSGETEKQAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5B7</accession>
    <name>E3E5B7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Carbamoyl-phosphate synthase large chain</fullName>
            <ecNumber evidence="13">6.3.5.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Carbamoyl-phosphate synthetase ammonia chain</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 17" type="primary">carB</name>
        <name evidence="17" type="ORF">PPSC2_16480</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>2 ATP + H2O + hydrogencarbonate + L-glutamine = 2 ADP + carbamoyl phosphate + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:18633"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="13">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="13">Binds 4 Mg(2+) or Mn(2+) ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="13">Amino-acid biosynthesis; L-arginine biosynthesis; carbamoyl phosphate from bicarbonate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 1/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the CarB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.5" evidence="13"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372063.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03815"/>
    <dbReference type="EnsemblBacteria" id="ADO57477">
        <property type="protein sequence ID" value="ADO57477"/>
        <property type="gene ID" value="PPSC2_16480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3518"/>
    <dbReference type="eggNOG" id="COG0458">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000513_1_3_9"/>
    <dbReference type="OMA" id="QFIEFEG"/>
    <dbReference type="OrthoDB" id="48855at2"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00171"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004088">
        <property type="term" value="F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01424">
        <property type="entry name" value="MGS_CPS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01210_A">
        <property type="entry name" value="CPSase_L_chain_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01210_B">
        <property type="entry name" value="CPSase_L_chain_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006275">
        <property type="entry name" value="CarbamoylP_synth_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005480">
        <property type="entry name" value="CarbamoylP_synth_lsu_oligo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036897">
        <property type="entry name" value="CarbamoylP_synth_lsu_oligo_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005483">
        <property type="entry name" value="CbamoylP_synth_lsu_CPSase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011607">
        <property type="entry name" value="MGS-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036914">
        <property type="entry name" value="MGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033937">
        <property type="entry name" value="MGS_CPS_CarB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02787">
        <property type="entry name" value="CPSase_L_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02142">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00098">
        <property type="entry name" value="CPSASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01096">
        <property type="entry name" value="CPSase_L_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00851">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48108">
        <property type="entry name" value="SSF48108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52335">
        <property type="entry name" value="SSF52335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01369">
        <property type="entry name" value="CPSaseII_lrg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00866">
        <property type="entry name" value="CPSASE_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51855">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="9 13 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="12" id="KW-0464">Manganese</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 13 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11 13" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 13" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ATP-grasp" evidence="15">
        <location>
            <begin position="133"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="15">
        <location>
            <begin position="679"/>
            <end position="869"/>
        </location>
    </feature>
    <feature type="domain" description="MGS-like" evidence="16">
        <location>
            <begin position="938"/>
            <end position="1071"/>
        </location>
    </feature>
    <feature type="region of interest" description="Carboxyphosphate synthetic domain" evidence="13">
        <location>
            <begin position="1"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="region of interest" description="Carbamoyl phosphate synthetic domain" evidence="13">
        <location>
            <begin position="555"/>
            <end position="937"/>
        </location>
    </feature>
    <feature type="region of interest" description="Allosteric domain" evidence="13">
        <location>
            <begin position="938"/>
            <end position="1071"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="284"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="298"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="300"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="828"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="840"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="842"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>4</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO57477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1071" mass="118236" checksum="A94B1E9E7C67CD52" modified="2011-01-11" version="1">MPKNTELKKILVIGSGPIVIGQAAEFDYAGTQACQALKEEGVEVVLINSNPATIMTDTNMADKVYIEPITLDFVTQIIRQERPDGLLPTLGGQTGLNMAVELARAGVLERENVKLLGTQLNSIEKAEDRDLFRDLMRELEQPVPESVIVTTLEESLEFANEIGYPIIVRPAYTLGGTGGGICATEEELRETVSSGLRYSPIGQCLVEKSIAGMKEVEYEVMRDGNDNCIVVCNMENFDPVGVHTGDSIVVAPSQTLSDREYQMLRSASLKIIRALNIEGGCNVQFALDPHSYQYYVIEVNPRVSRSSALASKATGYPIAKMAAKIALGYTLDEIVNPVTGQTYACFEPTLDYIVSKIPRWPFDKFISANRKLGTQMKATGEVMAIGRTFEESIHKAVRSLEIGVHRLHLKGADQLSDEVLKERLAKADDERLFLVAEAFRRGWKQQDIQDVTKIDWWFLDKVEGIVKFESIIAGEPELSSETLYQAKRKGFTDRSIAEIRSMGQQKSMTTELEVREFRLNQNLRPVYKMVDTCAAEFEATTPYYYSSYEVENEVIPSNKEKVIVLGSGPIRIGQGIEFDYSTVHAVWAIQKAGYEAVIINNNPETVSTDFNTSDRLYFEPLFFEDVMNVIEQEKPIGVIVQFGGQTAINLAAPLSAAGVNILGTSLESIDEAEDRKKFEQLLSRLAIAQPKGNTVTSVDEAVGTAQALGYPVLVRPSYVLGGRAMEIVYSDTELLRYMEEAVKINPEHPVLIDRYMLGKEVEVDAICDGETVLVPGIMEHVERAGVHSGDSIAVYPPQHLSDELKKKVVDITISIAKELKTIGLVNIQFVIHQDEVYVIEVNPRSSRTVPFLSKVTNIPMANLATQAILGGKLKDAGYTDGLWPESNYVSVKVPVFSFAKLRRVEPTLGPEMKSTGEVMGRDIQYAKALYKGLVGAGMKIPSTGAIIITVADKDKEEAVELMQGFYRLGYKIIATGGTAAALEQANIPVNTVNKLSEGNPNILDMIRTGEANFVFNTLTKGKTPERDGFRIRREAVENGIVCMTSLDTVRALLKMLETINFTSESMPVLSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5H8</accession>
    <name>E3E5H8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-mercaptopyruvate sulfurtransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">TST</name>
        <name evidence="3" type="ORF">PPSC2_17490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372278.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04830"/>
    <dbReference type="EnsemblBacteria" id="ADO57697">
        <property type="protein sequence ID" value="ADO57697"/>
        <property type="gene ID" value="PPSC2_17490"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17490"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3737"/>
    <dbReference type="eggNOG" id="COG2897">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031618_0_0_9"/>
    <dbReference type="OMA" id="QRPGHVP"/>
    <dbReference type="OrthoDB" id="920668at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004792">
        <property type="term" value="F:thiosulfate sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001307">
        <property type="entry name" value="Thiosulphate_STrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045078">
        <property type="entry name" value="TST/MPST-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11364">
        <property type="entry name" value="PTHR11364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00380">
        <property type="entry name" value="RHODANESE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="15"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="173"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="287" mass="32033" checksum="D9430A74987363B6" modified="2011-01-11" version="1">MKSIVSKRWLLARLYEPDIIIADCRSLLGQAGAGRNEFNEDHIPGAVHFDLEEDLTAPLGEHGGRHPLPDVDTLAARLSRAGINAASRIVAYDDQGGMMASRFWWLLRYLGHEQVYVLEEGYNAWKEAKFPVTADQPIRIPSTFVPNVQPQMLTSMKEVQRISETSVPVGSYIGFSPILIDSRERPRYLGLEEPIDQAAGHIPGAVNFFWKEVLDEKGAFKNEEQLKQHFSDLDQNAEIIVYCGSGVSACPNVLALNEAGFSNVRLYPGSWSDWISYEENPVATGQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5K1</accession>
    <name>E3E5K1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yrkN3</name>
        <name evidence="2" type="ORF">PPSC2_17610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372301.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3766"/>
    <dbReference type="EnsemblBacteria" id="ADO57720">
        <property type="protein sequence ID" value="ADO57720"/>
        <property type="gene ID" value="PPSC2_17610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3762"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_096795_3_0_9"/>
    <dbReference type="OMA" id="PDSTEWW"/>
    <dbReference type="OrthoDB" id="1983082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="17414" checksum="9C42F48C997D3E02" modified="2011-01-11" version="1">MLTLEKARKNDAQKLAEIQKASFEDESKYFNINETVGPIGYDSISWQEEMMQNCEYFKVLFNGEIIGGAMIFVECNQVHNLGRIFIDPNFKNQGIGTKMMEKIESEFPDSTEWWLDTPSWSVKNHHFYSKCGFTKVREEGDLYIFKKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5K8</accession>
    <name>E3E5K8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372308.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04960"/>
    <dbReference type="EnsemblBacteria" id="ADO57727">
        <property type="protein sequence ID" value="ADO57727"/>
        <property type="gene ID" value="PPSC2_17630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3770"/>
    <dbReference type="eggNOG" id="ENOG502ZTGM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2140755_0_0_9"/>
    <dbReference type="OMA" id="TSWVEYD"/>
    <dbReference type="OrthoDB" id="1989840at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="13935" checksum="4B90933DE516904E" modified="2011-01-11" version="1">MTLQDLFNEKPTQLWNKRMVEYGDDLFTEERLLMCDKVLDNYLNQLILLQETKHPESIMKAVEEIVISFNELNDANDYFIETMEREELAKFIDKAARLAGLEIEEDQDITEEWREW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Y4</accession>
    <name>E3E5Y4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Deferrochelatase</fullName>
            <ecNumber evidence="5">1.11.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Peroxidase EfeB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ycdB</name>
        <name evidence="8" type="ORF">PPSC2_19895</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the protoporphyrin ring intact.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>2 H(+) + heme b = Fe(2+) + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:22584"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="EC" id="4.99.1.1"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="3">
            <dbReference type="Rhea" id="RHEA:22585"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="5">Binds 1 heme b (iron(II)-protoporphyrin IX) group non-covalently per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the DyP-type peroxidase family.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372775.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07115"/>
    <dbReference type="EnsemblBacteria" id="ADO58203">
        <property type="protein sequence ID" value="ADO58203"/>
        <property type="gene ID" value="PPSC2_19895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4240"/>
    <dbReference type="eggNOG" id="COG2837">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039488_2_0_9"/>
    <dbReference type="OMA" id="QACANDP"/>
    <dbReference type="OrthoDB" id="837319at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033212">
        <property type="term" value="P:iron import into cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006314">
        <property type="entry name" value="Dyp_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006313">
        <property type="entry name" value="EfeB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04261">
        <property type="entry name" value="Dyp_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01413">
        <property type="entry name" value="Dyp_perox_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01412">
        <property type="entry name" value="tat_substr_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51404">
        <property type="entry name" value="DYP_PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0349">Heme</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1 5" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="252"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00033706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00033771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="454" mass="49404" checksum="C14E42D0E6BC5B7C" modified="2011-01-11" version="1">MKGFKRQKGQEKPQYAESRNEESDLTEKDAQSADDERSGKSKSVSRRDLLKLAGVGGLGLLLGGGSVGAVLSASQRLESMMTEADTKDVVPFYGKHQAGIVTPAQDFICFAAFDLTTRDKEQVRNLFKAWTEASATMTSGVLLGTDNENLNLPPSDTGEAAGLSPSRTTITFGVGPSFFDGRYDLASLKPAGFRELPRFQGDALDEQWCGGDIGVQVCANDLQVAFHALRNLARIARGTAVLRWTQEGFQRTAQADPAGSTPRNLLGFKDGTGNPDTSKADEMNRLVWTQTNDGPAWMGNGSYMAVRRIRMRVEVWDRSTLGDQEDTFGRHRSSGAPLGKSKEFDKLDLAATSPEGKPLTPPTSHVALAHGNGSINILRRSYSYSSGLDKQTGQLDAGLLFISYQRDLFKQFVHIQEKLARNDKLNEYIVHKGSAVFACFPGVSQGGYIGDTLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E618</accession>
    <name>E3E618_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyridine nucleotide-disulfide oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">trxR</name>
        <name evidence="2" type="ORF">PPSC2_20050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372809.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07285"/>
    <dbReference type="EnsemblBacteria" id="ADO58237">
        <property type="protein sequence ID" value="ADO58237"/>
        <property type="gene ID" value="PPSC2_20050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4274"/>
    <dbReference type="eggNOG" id="COG0492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031864_5_0_9"/>
    <dbReference type="OMA" id="ALMLPDW"/>
    <dbReference type="OrthoDB" id="2049098at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="1">
        <location>
            <begin position="3"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="302" mass="32906" checksum="56A130ECAC0308DE" modified="2011-01-11" version="1">MLYDCAIIGGGPAGLNAALVLGRARRSVALIDNNRPRNAVTHASHGFITRDGVTPAEFRRVAYEEVLRYPSVHHLPTEVISVTKKESIFEVFDSSGLRIQARKLILATGVKEVFPEIEGFYTFYGKSLFNCPYCDGWELRDQPLVLVSESPAIYHTAKLLLNWSKDLLVCTNGQAFLSDEQKERLQSKGVVVMEQPVAAFIGHHGQLEYASFTDGTQVPRVGGFVTPRFVQSTPFGGDLGCERTESGGIQTDGAGRTSIPGVYAAGDSSYFMPSQLIFAAADGSRTAASVNLDLTEEDFNEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Q8</accession>
    <name>E3E6Q8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ferredoxin--NADP reductase</fullName>
            <shortName evidence="2">FNR</shortName>
            <shortName evidence="2">Fd-NADP(+) reductase</shortName>
            <ecNumber evidence="2">1.18.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">trxB5</name>
        <name evidence="4" type="ORF">PPSC2_20395</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H(+) + NADP(+) + 2 reduced [2Fe-2S]-[ferredoxin] = NADPH + 2 oxidized [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:20125"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.18.1.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="2">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ferredoxin--NADP reductase type 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.18.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372889.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07650"/>
    <dbReference type="EnsemblBacteria" id="ADO58318">
        <property type="protein sequence ID" value="ADO58318"/>
        <property type="gene ID" value="PPSC2_20395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4351"/>
    <dbReference type="eggNOG" id="COG0492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031864_5_5_9"/>
    <dbReference type="OMA" id="PEKVIYD"/>
    <dbReference type="OrthoDB" id="692968at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004324">
        <property type="term" value="F:ferredoxin-NADP+ reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01685">
        <property type="entry name" value="FENR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022890">
        <property type="entry name" value="Fd--NADP_Rdtase_type_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="1 2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="3">
        <location>
            <begin position="12"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="53"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="289"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="330"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="36367" checksum="C10B41EC5A0B2D3F" modified="2011-01-11" version="1">MTAQSTGAEIRDLIIIGGGPAGIFAAFYGGMRQASVTLIESMPQLGGQLAALYPEKYIYDVAGFPKVTAQELVNNLVQQMNHFNPEVQLEEKVVSLEKKEERHFIVKTDKGGEYHGKAVIITAGVGAFEPRRLELPGADRFEKTNLHYFVSDLSKFAGRKVLISGGGDSAVDWALMLEPIAEQVTLIHRRDKFRAHEHSVENLLASKVNVITPTEIAELHGEDTITKVTLAHVKTKETQEIEVDDVIVNFGFVSTLGPIAEWGIEIESNSIVVDSRQETNIPGIFAAGDITTYPGKLKLIAVGFGEAPTAVNNAKVYVDPDAKLSPGHSSNMKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6U3</accession>
    <name>E3E6U3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cell surface protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">surfA</name>
        <name evidence="4" type="ORF">PPSC2_21315</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
            <topology evidence="1">Peptidoglycan-anchor</topology>
        </subcellularLocation>
    </comment>
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        <property type="protein sequence ID" value="ADO58495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4546"/>
    <dbReference type="EnsemblBacteria" id="ADO58495">
        <property type="protein sequence ID" value="ADO58495"/>
        <property type="gene ID" value="PPSC2_21315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4531"/>
    <dbReference type="eggNOG" id="COG5386">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092243_2_0_9"/>
    <dbReference type="OMA" id="MNRFEQF"/>
    <dbReference type="OrthoDB" id="1621544at2"/>
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    </dbReference>
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    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006635">
        <property type="entry name" value="NEAT_dom"/>
    </dbReference>
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        <property type="entry name" value="NEAT_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05031">
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="SUPFAM" id="SSF158911">
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    </dbReference>
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    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168027" evidence="2">
        <location>
            <begin position="38"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="3">
        <location>
            <begin position="39"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="155" mass="17086" checksum="58FBBD37931FDE59" modified="2011-01-11" version="1">MNMVMNRFEQFSFKKVFVALIMTALVFALMAPLSAKAAAADGTYNVDYTVLKDQTNETSRLDSYLTKPAQVTVANGKNVVRLTVKSSNLITAFKVEQNGVLQDATVVSTNTANNTRVVEFEVADLNAKVNAYAEITIPVVNYTGKYDVQLQFDEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7A7</accession>
    <name>E3E7A7_PAEPS</name>
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    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    <dbReference type="OrthoDB" id="1812714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="26223" checksum="56CF5492364CBF53" modified="2011-01-11" version="1">MEQKRFKDEYGYKYDFAAVIRRGEQVAVHCPRCQGQAFISRSKEDCYYVVRCSHCYYTFQQPESYKFYARGVCSHCERYFNIEIHDDRTVTHKNTNIHCPHCETRNQVPVHRMQSREWHTDVIQNGKDPIFQLQLYFLDYYRGKPVWALNRIHLNYLLSYISAELREKPTSGMMRTASHSIPKYIKDAKNRQAILKILQKLQHKQASKGEHSKHEYTNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7A8</accession>
    <name>E3E7A8_PAEPS</name>
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            <fullName evidence="1">Uncharacterized protein</fullName>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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        <property type="gene ID" value="PPSC2_23570"/>
    </dbReference>
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    <dbReference type="eggNOG" id="ENOG502Z8QV">
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    <dbReference type="OrthoDB" id="623944at2"/>
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    </dbReference>
    <dbReference type="InterPro" id="IPR046136">
        <property type="entry name" value="DUF6138"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19635">
        <property type="entry name" value="DUF6138"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="544" mass="62629" checksum="5A2F7204B7635760" modified="2011-01-11" version="1">MTSGVQAYIDPIFEEIDQRYASEQKRIAEFKTKSVLHEGIHEYLKVTCKSDGLWVDTYEPFDWDHRRPDMDISGFTEEVTLQQVQDEWMPVFKERIAALYNSEEFSPMFFRYRLEFHLEVVLENKASHFTFSLLNEDKRQHLLATIEQFVEQKLDPASKAIPKEEDDFFLVRHLLDPHLYPIDAQWVNELLNRMDAKVQVSRKREEAWRHQLSRGLMHWAEDEFLAKYADREKNYGLEYTVRPDILPSDIPAPAMEMFLLTAMRVGSTDADARQSYLEIAAQLGSNQAAEWLKSGSGSIPASYTSERVTCQANDILQTLEVQIRSEEEESYREALVYLCDILRKGFTKEYGMKFKSKVKNYLPIPKLAKSALHRFFANALEYPSLHPLLAEYAETVMEEFKWYNDVEPGEKSAMPGTYAVMGLGLKGTEYFPLVSRYMKLVDSEHQSVQDGYAAVFAEAHGLTPDTIPVWVRILLAGNDSAKPLKSAGIESAEQAKALVNVLEKLEDYEQEMIVYRIWGGAKKLKNSLKQAVPEVKEILETLIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7B8</accession>
    <name>E3E7B8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Polar amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glnP9</name>
        <name evidence="8" type="ORF">PPSC2_23615</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
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        <property type="protein sequence ID" value="ADO58973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO58973">
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        <property type="gene ID" value="PPSC2_23615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4999"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_1_0_9"/>
    <dbReference type="OMA" id="KVRYAEF"/>
    <dbReference type="OrthoDB" id="1523519at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
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    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="189"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="19"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="221" mass="24512" checksum="4523B1B65121E9DF" modified="2011-01-11" version="1">MNLDWEFIVESLPLYGEAMWLTLKIAFFAILFSLVVGLLCSIVLYYRVKGISGIIVAYIELSRNTPLLVQLYFLYYGFTKIGLHMSEMTCAIVGMTFLGGGYMAEAFRGGIEAVSKTQTESGLSLGLSKIQLARYVILPQAFSISIPSLGANAIFLLKETSIVGAIALLDLMNVAKDLIGMYYKTTESLILLVLAYLVLLLPLSMLLTWVERKVRYAEFGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7D4</accession>
    <name>E3E7D4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhfK</name>
        <name evidence="2" type="ORF">PPSC2_24410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373679.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5208"/>
    <dbReference type="EnsemblBacteria" id="ADO59145">
        <property type="protein sequence ID" value="ADO59145"/>
        <property type="gene ID" value="PPSC2_24410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5169"/>
    <dbReference type="eggNOG" id="COG0702">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025711_1_2_9"/>
    <dbReference type="OMA" id="AKHYADR"/>
    <dbReference type="OrthoDB" id="948454at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="7"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="22543" checksum="52520DDAC8DAE293" modified="2011-01-11" version="1">MNVLVIGANGKVGRHLVRLLGQHESHRVKALIRKPDQAEALERLGAETVVADLEGTVGEIAAAIQGSDAVVFTAGSGGNTGADKTLLIDLDGAVKAMEAAEQAGIRRFIMVSALYAENREQWPESIKPYYVAKHYADRLLEASNLDYTILRPGGLTDDAGTGKVATGEDLTSHTISREDVAATVVAALEEKQTYHRAIDLVSGSTPIAEAIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7J4</accession>
    <name>E3E7J4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Iron ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fhuG5</name>
        <name evidence="8" type="ORF">PPSC2_13270</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371402.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00960"/>
    <dbReference type="EnsemblBacteria" id="ADO56799">
        <property type="protein sequence ID" value="ADO56799"/>
        <property type="gene ID" value="PPSC2_13270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2827"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_2_9"/>
    <dbReference type="OMA" id="VFIWIVR"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="75"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="132"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="166"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="209"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="294"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="325"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="348" mass="36778" checksum="E420613BF5D6D15F" modified="2011-01-11" version="1">MSNVTNGAIAKASHRKKIHDWMVVIILLVLLIAAFTVSANTGTIRLSPMELFRTLFGQGTPQQELILFEFRLPRMIIAILIGAGLAVSGCIMQGVSRNSLADPGILGINAGAGLMVMLFVLLFPSMQTMNSLFLLPALALIGSGATAILIYALSYKKGEGISPTRLLLSGIGVAAGISAAMIIMTLKLTPESYTFVANWLAGSIWGSNWKFVMALLPWIIVLLPFAYYKANVMNVLNLGDQTASGLGTPIEKERILLLAAAVGLASSSVSVSGGIGFVGLVAPHLARKLVGPKHKMLLVTCALVGALLVLVADTITRALPLQKEIPTGLIVAIIGAPYFLYLLSRSKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E818</accession>
    <name>E3E818_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RibB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ribB</name>
        <name evidence="2" type="ORF">PPSC2_14845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371727.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3172"/>
    <dbReference type="EnsemblBacteria" id="ADO57131">
        <property type="protein sequence ID" value="ADO57131"/>
        <property type="gene ID" value="PPSC2_14845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3168"/>
    <dbReference type="eggNOG" id="ENOG50340RJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1693755_0_0_9"/>
    <dbReference type="OMA" id="PILMCEI"/>
    <dbReference type="OrthoDB" id="1471241at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014957">
        <property type="entry name" value="IDEAL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08858">
        <property type="entry name" value="IDEAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IDEAL" evidence="1">
        <location>
            <begin position="120"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="155" mass="17567" checksum="8E2791D7D20BB838" modified="2011-01-11" version="1">MIKLNTVEIIEIIKKQIPKVMNITPVELKFTDDFGRASLAATEHKFTLTNQHYSAKVMDCVLETQVRPILMCEIIYFLKCEFIDGHVDVRLDYEACSEGERGPVASAVITFDHDTQLGVDELADLIDLALHMNDKSWFEELSSQYVKTKAGASIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E823</accession>
    <name>E3E823_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Stage V sporulation protein AF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gerKA4</name>
        <name evidence="4" type="ORF">PPSC2_14870</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371731.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02505"/>
    <dbReference type="EnsemblBacteria" id="ADO57136">
        <property type="protein sequence ID" value="ADO57136"/>
        <property type="gene ID" value="PPSC2_14870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14870"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3173"/>
    <dbReference type="eggNOG" id="COG0697">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021639_3_1_9"/>
    <dbReference type="OMA" id="NTPYLWP"/>
    <dbReference type="OrthoDB" id="509060at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004995">
        <property type="entry name" value="Spore_Ger"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03323">
        <property type="entry name" value="GerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005690">
        <property type="entry name" value="GerBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="351"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="419"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="446"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="473"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="508"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="536"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="550"/>
            <end position="564"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="564" mass="63990" checksum="386BE9D99F4CE8DC" modified="2011-01-11" version="1">MDHRTDQDQQEHYHGDGAIGRENHTDGESLGSWKQKQEQEAARLKHKKESERSDNVEESIRYWQIEDDISPKMKENRETLKMVLGLGETFDVVFREMTTGGRHIGYLFLNTFAKDQIMLEVLKRLTYLTPDDMTSAGLQAYFENFIPHIQVEKTDKMSVVINKVLTGMSALFMEGERFAVILDTRNYPVRSPEEPSLERVVRGARDGFTETMLTNVGLVRRRLRDPGLKFEAMQVGRRTRTDVCLGYIDDIVDKVMVDTVRDKIKNVNLDGIPLADKQLEETIINKGWNPYPLVRYSERPDVVASHIMEGRLVIFVDTSPSVMILPTTFFDLCQHAEENRQTAFMGSYLRWVRFIGIFASMFLLPMWLLMVINPELKPAFLDFIGPQKEAHFPLIAQFIIVELGVDLMRMAAVHTPTPLASAMGLIAAILVGDIAVKTGLFVNEVVLYMAVAAIGMFATPSYELGLANRLIRLFLLIAVAIFHVPGFVVGTTLIILMLTLHRSYNSSYLWPFIPFNAKALASILFRMPVLDAPNRPSFNKTRDNTRMPHTDANTDSNSGNGQEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E824</accession>
    <name>E3E824_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stage V sporulation protein AB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spoVAB</name>
        <name evidence="2" type="ORF">PPSC2_14875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371732.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02510"/>
    <dbReference type="EnsemblBacteria" id="ADO57137">
        <property type="protein sequence ID" value="ADO57137"/>
        <property type="gene ID" value="PPSC2_14875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3174"/>
    <dbReference type="eggNOG" id="ENOG503152T">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_151137_1_0_9"/>
    <dbReference type="OMA" id="TEVLNVW"/>
    <dbReference type="OrthoDB" id="2042524at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020144">
        <property type="entry name" value="SpoVAB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13782">
        <property type="entry name" value="SpoVAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="15300" checksum="7A31B51F3D8CD46E" modified="2011-01-11" version="1">MIFVQAALQIILGIAGGLAVGSGVIAFFIVLDIMPRLAQLTRTYKKSRAYEKAMILGSVVGTVADFWNICLPLPGIFTWIPGLFCGVFIGLLAAALTEVLNLLPILAKRLHMTVYMFGLLMAMVLGKVTGSLFDWFVYNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8F0</accession>
    <name>E3E8F0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Cell division protein FtsZ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 10" type="primary">ftsZ</name>
        <name evidence="10" type="ORF">PPSC2_16580</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="5">Assembles at midcell at the inner surface of the cytoplasmic membrane.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the FtsZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372084.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03915"/>
    <dbReference type="EnsemblBacteria" id="ADO57499">
        <property type="protein sequence ID" value="ADO57499"/>
        <property type="gene ID" value="PPSC2_16580"/>
    </dbReference>
    <dbReference type="GeneID" id="66576730"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3539"/>
    <dbReference type="eggNOG" id="COG0206">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024865_0_1_9"/>
    <dbReference type="OMA" id="GNPSIGQ"/>
    <dbReference type="OrthoDB" id="1009041at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032153">
        <property type="term" value="C:cell division site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043093">
        <property type="term" value="P:FtsZ-dependent cytokinesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051258">
        <property type="term" value="P:protein polymerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02201">
        <property type="entry name" value="FtsZ_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1440">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00909">
        <property type="entry name" value="FtsZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000158">
        <property type="entry name" value="Cell_div_FtsZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020805">
        <property type="entry name" value="Cell_div_FtsZ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045061">
        <property type="entry name" value="FtsZ/CetZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024757">
        <property type="entry name" value="FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008280">
        <property type="entry name" value="Tub_FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037103">
        <property type="entry name" value="Tubulin/FtsZ-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018316">
        <property type="entry name" value="Tubulin/FtsZ_2-layer-sand-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036525">
        <property type="entry name" value="Tubulin/FtsZ_GTPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003008">
        <property type="entry name" value="Tubulin_FtsZ_GTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30314">
        <property type="entry name" value="PTHR30314"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12327">
        <property type="entry name" value="FtsZ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00091">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00423">
        <property type="entry name" value="CELLDVISFTSZ"/>
    </dbReference>
    <dbReference type="SMART" id="SM00864">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00865">
        <property type="entry name" value="Tubulin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52490">
        <property type="entry name" value="SSF52490"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55307">
        <property type="entry name" value="SSF55307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00065">
        <property type="entry name" value="ftsZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01134">
        <property type="entry name" value="FTSZ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01135">
        <property type="entry name" value="FTSZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="5 6 10" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0717">Septation</keyword>
    <feature type="domain" description="Tubulin" evidence="8">
        <location>
            <begin position="13"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="Tubulin_C" evidence="9">
        <location>
            <begin position="207"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="315"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="335"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="21"/>
            <end position="25"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="108"/>
            <end position="110"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="139"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="39585" checksum="951617B9407E941C" modified="2011-01-11" version="1">MLEFDFEMESLAQIKVIGVGGGGSNAVNRMIENGVQGVEFITVNTDAQALHLAKSEHKLQIGDKLTRGLGAGANPDVGKKAAEESRELIMNTLKGADMVFVTAGMGGGTGTGAAPVIAEIAKECGALTVGVVTRPFTFEGRKRSNQAELGIEGLKEKVDTLIVIPNDRLLEIVDKKTPMLEAFREADNVLRQAVQGISDLIAVPGLINLDFADVKTIMTERGSALMGIGEATGENRAAEAARKAIMSPLLETSIEGARGVIMNITGGTNLSLYEVNEAAEIVTSASDPEVNMIFGAIIDEDLKEEIKVTVIATGFEGKPSQPAPGRRPAANPAASEATEKSSPNLRPFGNTQSSDQLDIPTFLRNRSRNNNNDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8J3</accession>
    <name>E3E8J3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gntR9</name>
        <name evidence="5" type="ORF">PPSC2_16780</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372126.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04115"/>
    <dbReference type="EnsemblBacteria" id="ADO57542">
        <property type="protein sequence ID" value="ADO57542"/>
        <property type="gene ID" value="PPSC2_16780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3581"/>
    <dbReference type="eggNOG" id="COG1167">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_0_0_9"/>
    <dbReference type="OMA" id="WRKIYKH"/>
    <dbReference type="OrthoDB" id="1024978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="11"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="491" mass="54583" checksum="60AFB0572BD01A6F" modified="2011-01-11" version="1">MHIDLSRNSSVKLYLQITKTLADRIQSGLLPQGTKLPSIRHLSSLLAVSPVTVSKAYAELESMNLVTCTQGKGCYVAEASVPIYHEGTQDLSWQMSLIDYLPRAQLWRNFNHSREATYSFHIAAIQPELLPTREIIADTHRLSSENSDVMAAYGTFEGDLELREVFADHLSERGIPIVAEQLLVTSGAQQGIDLVARTFVGPGDVVYMEAPTYTGAIDVFTSRGAKVIMIPMDEEGMRIDILTRLCDTHPPKLIYTIPTFHNPTGVTLTMARRTQLLDLAQSYHCLIVEDDPFSDLYYKTKPPLSIKAHDQSGHVVYIKSFSKTVAPGCRIACVAATGSVMDRLVAAKSTTDLGSPLLTQKTLLPFLRNRLDQHFVSLREQIRDRLTVALNTLQRYAPPEVTWYAPEGGLNVWIKLPSMVDIPELERVADREGISFLPGAVCYAGGMDSNHIRISFSYTDKETLKSGLRKLCNLLGDILDHSVIVERKPIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8M2</accession>
    <name>E3E8M2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ycxD</name>
        <name evidence="5" type="ORF">PPSC2_16910</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372153.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04245"/>
    <dbReference type="EnsemblBacteria" id="ADO57571">
        <property type="protein sequence ID" value="ADO57571"/>
        <property type="gene ID" value="PPSC2_16910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3610"/>
    <dbReference type="eggNOG" id="COG1167">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_0_0_9"/>
    <dbReference type="OMA" id="LIRGMFH"/>
    <dbReference type="OrthoDB" id="1024978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="447" mass="51527" checksum="6DB4F5E9D9A269CF" modified="2011-01-11" version="1">MKKYVSILLDIELKIREGQYRSGYKLPSVRDASELYKCSKSTILRAYAELERKHAIYSIPQSGYYVVENPSDVHHSDISDCVDFASASPDLNVFPYLDFQHCLNQAIDTYKYHLFTYGDSQGLETLRHTLVSHLADTQVFAKTDRIIVTSGVQQALEILAKMSFPNGKEKILVEQPSYNIYLRFLEEESIPVNTIARTAEGLDFHELENQFKQENIKFFYTMSRYHNPLGISYNMEERKTIAALAAKYDVYIVEDDYMADLGVDHLVDPIYAYDQTEHTIYLKSFSKIIFPGLRLGVAVLPESLLRTFSSYKRYVDTSILSQAALDIYIKNGMYERHKHTISKLYSERVRILNKAVERYNQTGYIQTPAATSGVYTQFKLPRTVNLERLVHSLNARNIQVVAGKGFYLSSYREQEKFLRISISRAQPDQIDQGVKSIIEEVSKGNWY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8R9</accession>
    <name>E3E8R9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57777.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3823"/>
    <dbReference type="EnsemblBacteria" id="ADO57777">
        <property type="protein sequence ID" value="ADO57777"/>
        <property type="gene ID" value="PPSC2_17880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3820"/>
    <dbReference type="HOGENOM" id="CLU_2288773_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57777.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11631" checksum="164F973B6AF20778" modified="2015-05-27" version="2">MLPFILFILAHSSVKDSLYAEVYGAYQNATAYRRINLRLNGFNFAYKTAASLQTVKNGLHSMAQWASLIIESLFRCEMNYIGLFIADWMEGLHFLACYYDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8U4</accession>
    <name>E3E8U4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">narH</name>
        <name evidence="2" type="ORF">PPSC2_18005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57803.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324613.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05325"/>
    <dbReference type="EnsemblBacteria" id="ADO57803">
        <property type="protein sequence ID" value="ADO57803"/>
        <property type="gene ID" value="PPSC2_18005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3847"/>
    <dbReference type="eggNOG" id="COG1140">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043374_5_2_9"/>
    <dbReference type="OrthoDB" id="1762646at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009325">
        <property type="term" value="C:nitrate reductase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008940">
        <property type="term" value="F:nitrate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042126">
        <property type="term" value="P:nitrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10557">
        <property type="entry name" value="NarH_beta-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029263">
        <property type="entry name" value="Nitr_red_bet_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038262">
        <property type="entry name" value="Nitr_red_bet_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006547">
        <property type="entry name" value="NO3_Rdtase_bsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13247">
        <property type="entry name" value="Fer4_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14711">
        <property type="entry name" value="Nitr_red_bet_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01660">
        <property type="entry name" value="narH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="174"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="207"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57803.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="529" mass="60160" checksum="70391BAECDB06817" modified="2015-05-27" version="2">MKIKAQIAMVMNLDKCIGCHTCSVTCKTTWTNRKGAEYMWFNNVETKPGIGYPKRWEDQEQYKGGWQLRKGKLELKSGNKLSKIALGKIFYNPDMPEMKDYYEPWTYNYEHLTNAKEQKHSPVARAQSAVTGEKMDLNWGPNWEDDLAGTHVTGPLDPNIQKIEEEIKFNFEKSFMLYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQEACRGWRYCMTGCPYKKVYFNWQTNKAEKCTFCFPRVEAGLPTVCSETCTGRIRYLGVLLYDADKVQEAASKEDEKDLYKAQCDLFLDPSDPAVIAQAKKDGISQDWIEAAQNSPVYKLAIEYKLAFPLHPEYRTLPMVWYVPPLSPIMNYFEGKDSIENPDMIFPAIEEMRTPIQYLANMLTAGDTQTVKESLQRMAMMRSYMRAQSTGQSFDESRLERTGMTARQAEQMYRLLAIAKYEDRFVIPTSHKEGYANPYRAQGAAGYGDTLGTMDSCGTQGAGCSGCSLGSSTGMEEPSKTGKQMYEENFYGGIWRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8V0</accession>
    <name>E3E8V0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Molybdenum ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">modA3</name>
        <name evidence="5" type="ORF">PPSC2_18020</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein ModA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372389.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05340"/>
    <dbReference type="EnsemblBacteria" id="ADO57809">
        <property type="protein sequence ID" value="ADO57809"/>
        <property type="gene ID" value="PPSC2_18020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3851"/>
    <dbReference type="eggNOG" id="COG0725">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065520_3_1_9"/>
    <dbReference type="OMA" id="DITRPKK"/>
    <dbReference type="OrthoDB" id="1506401at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015689">
        <property type="term" value="P:molybdate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13537">
        <property type="entry name" value="PBP2_YvgL_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005950">
        <property type="entry name" value="ModA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041879">
        <property type="entry name" value="YvgL-like_PBP2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004846">
        <property type="entry name" value="ModA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01256">
        <property type="entry name" value="modA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168074" evidence="4">
        <location>
            <begin position="32"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="200"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR004846-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="283" mass="30814" checksum="F62BFF26A3593190" modified="2011-01-11" version="1">MKKFVKHSQALFFIFAIVLLLAGCGAGQQSASSGSSTVQNEVSGQDSSNKAETVDLTISAAASLTDALKEIQPLYESSHKGIKLNFNFGGSGALEKQIEQGAPSDLFLSASKKNMKSLVDQQLIESNQQKIWLTNELVVVIPADGTMSITSVKDLTQSEVKKVAIGIPESVPAGKYAQEALTNVKLWDVLQDKLVQAKDVRQVLQYVETGNTDVGFVYKTDALTSQKAKIAFEVDSKTYSTVEYPIGIIKASKHIQEAESFYEYLQSQEALNIMAKYGFTIPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E939</accession>
    <name>E3E939_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yobV13</name>
        <name evidence="4" type="ORF">PPSC2_24845</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373779.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12335"/>
    <dbReference type="EnsemblBacteria" id="ADO59246">
        <property type="protein sequence ID" value="ADO59246"/>
        <property type="gene ID" value="PPSC2_24845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5266"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041141_4_4_9"/>
    <dbReference type="OMA" id="PDVLMTL"/>
    <dbReference type="OrthoDB" id="1654295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028349">
        <property type="entry name" value="PafC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016838">
        <property type="entry name" value="PafC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="3">
        <location>
            <begin position="3"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="36175" checksum="1E8FC6422F780426" modified="2011-01-11" version="1">MNKTDRLLAILLELQRKDIIRAEDLAAIFETSVRTIYRDIQALSESGVPIVGAPGIGYSLMEGYFLPPVSFTVEEAVALLIGTDFVEQKFDTDYGMKAQTSRRKIEAILPESVRREVAQVRTTIRLLAVGKGTNHTEKAYLETLRIAVLAKQKVRFGYSKKMPEADGNRQSVRVVAPYGLVLLHGSWVLIGQCELRQQLRHFRLSRMNDLIMLEDGYQLPIDFNLQDYKQADDRHINVHIQIRSDIVDKVKEANHFYMESMEEREDGIHVFFRVRHPEELLSWILGWGADVVVLEPESLRERVRTEVEKMLKCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E950</accession>
    <name>E3E950_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore gernimation protein GerQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yraD3</name>
        <name evidence="3" type="ORF">PPSC2_24900</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Spore coat</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CotF family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373790.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12390"/>
    <dbReference type="EnsemblBacteria" id="ADO59257">
        <property type="protein sequence ID" value="ADO59257"/>
        <property type="gene ID" value="PPSC2_24900"/>
    </dbReference>
    <dbReference type="GeneID" id="66575092"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5277"/>
    <dbReference type="eggNOG" id="COG5577">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_163858_2_0_9"/>
    <dbReference type="OMA" id="EQISAYM"/>
    <dbReference type="OrthoDB" id="1952177at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012851">
        <property type="entry name" value="Spore_coat_CotF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39183">
        <property type="entry name" value="PTHR39183"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07875">
        <property type="entry name" value="Coat_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00024344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="99" mass="11143" checksum="1386533BF635F16A" modified="2011-01-11" version="1">MNILLEHLTGLNILTDQVIAADFLNTAKSGVRNYAMAVTEAGTPEIKAMLTKQLDEAIDMHEQISTYMIERGWYHPWNVNEQLSMDLQNINTALQAPVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9D9</accession>
    <name>E3E9D9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">S 49</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">S 49</name>
        <name evidence="1" type="ORF">PPSC2_16170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371998.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3455"/>
    <dbReference type="EnsemblBacteria" id="ADO57412">
        <property type="protein sequence ID" value="ADO57412"/>
        <property type="gene ID" value="PPSC2_16170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3453"/>
    <dbReference type="eggNOG" id="ENOG5030K44">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_899685_0_0_9"/>
    <dbReference type="OrthoDB" id="584230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019062">
        <property type="term" value="P:virion attachment to host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005068">
        <property type="entry name" value="Phage_lambda_Stf-r2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03406">
        <property type="entry name" value="Phage_fiber_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="33027" checksum="9A983A935A5BD3B1" modified="2011-01-11" version="1">MPIKQPRRFVTTDQGHADVLNVPIDTLYENDQALAEQIENIKNDPAGNDIASKAALDSHISDTNLHVTTAKQATWNAAEGNAKKYTEQYAAPKAHTHPASDLPSASTQARGIVQINTSVSSTSTDQAAAPIAVKTAYDRANEAYSRADQAFTQAVDLKNKISGAINGKGGSANASMTGDQFAAAITNLPGKRWARGTFNGQNAQASSWGQSVAMNVAVNNLAFVVSRVFVWVKLTESDGFSQVEGFVTSSREGTNQTIRGWRSNSVGIDTLPPTLTNGFNLTVTGSRIDAYAGGSPVSKVWAYEWWAFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9I8</accession>
    <name>E3E9I8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)</fullName>
            <ecNumber evidence="2">3.6.1.41</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yqeK</name>
        <name evidence="5" type="ORF">PPSC2_17125</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + P(1),P(4)-bis(5'-adenosyl) tetraphosphate = 2 ADP + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:24252"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58141"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.1.41"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.6.1.41" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372200.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04460"/>
    <dbReference type="EnsemblBacteria" id="ADO57619">
        <property type="protein sequence ID" value="ADO57619"/>
        <property type="gene ID" value="PPSC2_17125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3658"/>
    <dbReference type="eggNOG" id="COG1713">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089580_1_2_9"/>
    <dbReference type="OMA" id="ILTRNWA"/>
    <dbReference type="OrthoDB" id="1433958at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006675">
        <property type="entry name" value="HDIG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005249">
        <property type="entry name" value="YqeK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00277">
        <property type="entry name" value="HDIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00488">
        <property type="entry name" value="TIGR00488"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="4">
        <location>
            <begin position="20"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012506"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="198" mass="22796" checksum="AA651ED277F8E213" modified="2011-01-11" version="1">MKYSREQLMEAVSGQMPEKRWKHTLGVMHTSVELAKRYGADPDKAELAAILHDVAKYWPVQQMEEVIRNYPECDQELLEHDKQLWHSEVGYCVAARDYGVDDPEIRNAIRWHTSGRVGMSLLDKVVCLADYIEPGRDFPGVEHIRKQAKKSLEQGLIAGFDSTISLLLEKQKVIFPLTVLSRNDLIQQLKQKKTEVHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9M3</accession>
    <name>E3E9M3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YwiC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywiC</name>
        <name evidence="2" type="ORF">PPSC2_18040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57813.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886028.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05360"/>
    <dbReference type="EnsemblBacteria" id="ADO57813">
        <property type="protein sequence ID" value="ADO57813"/>
        <property type="gene ID" value="PPSC2_18040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3855"/>
    <dbReference type="eggNOG" id="ENOG5032U78">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064238_2_0_9"/>
    <dbReference type="OrthoDB" id="1299644at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025576">
        <property type="entry name" value="YwiC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14256">
        <property type="entry name" value="YwiC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57813.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="30686" checksum="AEEE9AADF1DF017E" modified="2015-05-27" version="2">MDDESINRSYKDVTHCEKRIKTLKGISRYIPNQHGAWAMLILPFLFGLAASPKQFIHIPLFVCWFFIYLFSFPVLQWIKTGNSKRYRKPVVIYGAILLPLLASLVWVKPALIWYGVLLLFFFMANMYYAKMKNERALLNDIAAILLFCSFIYPVVHIGEGGDWTLTTELFLLLVCYFIGTALYVKTIIRERKNPRYYYASIIYHLIIVLFAAWIKVFLVIPFLILFIRAIWLPKFELKAKHVGMAEIGFSLMLYVSVLFLYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9W5</accession>
    <name>E3E9W5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cell shape-determining protein MreB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">mreB</name>
        <name evidence="3" type="ORF">PPSC2_19400</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Forms polymers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="2">Membrane-associated.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the FtsA/MreB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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        <property type="protein sequence ID" value="ADO58098"/>
        <property type="gene ID" value="PPSC2_19400"/>
    </dbReference>
    <dbReference type="GeneID" id="66576188"/>
    <dbReference type="KEGG" id="ppm:PPSC2_19400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4139"/>
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    <dbReference type="HOGENOM" id="CLU_052037_0_0_9"/>
    <dbReference type="OMA" id="MVICIPS"/>
    <dbReference type="OrthoDB" id="410781at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000902">
        <property type="term" value="P:cell morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd10225">
        <property type="entry name" value="MreB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02207">
        <property type="entry name" value="MreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
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        <property type="entry name" value="MreB"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01652">
        <property type="entry name" value="SHAPEPROTEIN"/>
    </dbReference>
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        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00904">
        <property type="entry name" value="mreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0133">Cell shape</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="15"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="161"/>
            <end position="163"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="209"/>
            <end position="212"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="289"/>
            <end position="292"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="344" mass="36753" checksum="57150ED464FA9732" modified="2011-01-11" version="1">MLGGFTKDLGIDLGTANTLVYVRGKGIVVREPSVVALRTDTKTIEAVGESAKKMIGRTPGNIRAIRPMKDGVIADFDTTATMIKYFIRQAQAQRSLFPRHPNVMVCVPSGITAVEQRAVEDATKQAGAREAYTIEEPFAAAIGADLPVWEPTGSMVVDIGGGTTEVAVISLGGIVTSRSVRVAGDEMDESIIQYVKRQYNLMIGERTSEQLKMEVGSAMPLEQVETSEIRGRDLVTGLPKTITITSDEISEALSDTVNAIVDAVKVTLEKCPPELAADIMDRGIVLTGGGALLRNLDKLLAGETGMPVIVAENPLDCVAIGTGRALENIHLFKSRSSSAVRSKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT3</accession>
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    </gene>
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    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO58997">
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        <property type="gene ID" value="PPSC2_23735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23735"/>
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    <dbReference type="eggNOG" id="ENOG5033A2Q">
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    <dbReference type="OMA" id="EYHPEEY"/>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="112" mass="13028" checksum="7724AEA379E5C8FE" modified="2011-01-11" version="1">MAQQETWLIKHAVTGRSFADSRKQRFDCRLELADGVFRFTLQELPREAAEAIVRFSEELNVFRFVTPADGGPVVKHWYYVTPESVQYHAQIGELTFEAGSEIEYHPEEYWGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAW2</accession>
    <name>E3EAW2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_23870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    <dbReference type="eggNOG" id="ENOG503456K">
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="152" mass="16976" checksum="D20687A6B8CEBB64" modified="2011-01-11" version="1">MERNQAERIVAELLERAAIGVTVKLEKRFPGGRLIGGKYAMHAHAITMYTDVIETQCLQLFGSADRVEEYFTVVLAHEIGHAADTELEGLSDAMEQENGIGTRQRLALQIEENAWNYALRLVPEIEATFISAVIDESLLAYRVPIMEQSDIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB05</accession>
    <name>E3EB05_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YflH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yflH</name>
        <name evidence="1" type="ORF">PPSC2_25020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
    <dbReference type="GeneID" id="66575069"/>
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    <dbReference type="OMA" id="HEEPQNG"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021637">
        <property type="entry name" value="DUF3243"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038292">
        <property type="entry name" value="YmfJ/YflH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11588">
        <property type="entry name" value="DUF3243"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="12679" checksum="33771A3F8A9AFD02" modified="2011-01-11" version="1">MAEHNHVVNKEGEVALNKVDDALNRIDDSKKDDILGSFDSFKSYLSDKIEMAQKIGLNEEVMAKAAEKIAGYLAAKEEPRNSEEKLLQELWKVGDKEQQHALAHMLVRVAQSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB31</accession>
    <name>E3EB31_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglycerate mutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pgm3</name>
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    </gene>
    <organism evidence="1 2">
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        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
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                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59311.1"/>
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    </dbReference>
    <dbReference type="RefSeq" id="WP_013373844.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12635"/>
    <dbReference type="EnsemblBacteria" id="ADO59311">
        <property type="protein sequence ID" value="ADO59311"/>
        <property type="gene ID" value="PPSC2_25135"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25135"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5327"/>
    <dbReference type="eggNOG" id="COG0406">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033323_12_2_9"/>
    <dbReference type="OMA" id="FIYMVRH"/>
    <dbReference type="OrthoDB" id="1122642at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="191" mass="22064" checksum="14A1F53754EA190C" modified="2011-01-11" version="1">METFIYMVRHGESPKTEGNERTRGLTDKGKSDAYRITELLKGEGIEVFVSSPYQRAILTIQELARRSGQEVLVFEDLKERIFLNEDHRMPDAELFPLLDKSFSDPNFALQGGESNTVCQNRSIAVLKELLKTYRGQKVALGTHGAIMTLMMGYYDKQYDLNFLLHTSKPDVYRMKFNGQELIEVKRLWYTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBD5</accession>
    <name>E3EBD5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 11">Cytidine deaminase</fullName>
            <ecNumber evidence="6 11">3.5.4.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">Cytidine aminohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">cdd</name>
        <name evidence="13" type="ORF">PPSC2_21855</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 11">This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 11">
            <text>2'-deoxycytidine + H(+) + H2O = 2'-deoxyuridine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:13433"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15698"/>
            <dbReference type="ChEBI" id="CHEBI:16450"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>cytidine + H(+) + H2O = NH4(+) + uridine</text>
            <dbReference type="Rhea" id="RHEA:16069"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16704"/>
            <dbReference type="ChEBI" id="CHEBI:17562"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5 11">Belongs to the cytidine and deoxycytidylate deaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.5" evidence="6 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373176.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09000"/>
    <dbReference type="EnsemblBacteria" id="ADO58609">
        <property type="protein sequence ID" value="ADO58609"/>
        <property type="gene ID" value="PPSC2_21855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4649"/>
    <dbReference type="eggNOG" id="COG0295">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097262_0_1_9"/>
    <dbReference type="OMA" id="IYRGCNI"/>
    <dbReference type="OrthoDB" id="1895660at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004126">
        <property type="term" value="F:cytidine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047844">
        <property type="term" value="F:deoxycytidine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016192">
        <property type="entry name" value="APOBEC/CMP_deaminase_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006262">
        <property type="entry name" value="Cyt_deam_tetra"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00383">
        <property type="entry name" value="dCMP_cyt_deam_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01354">
        <property type="entry name" value="cyt_deam_tetra"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00903">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="12">
        <location>
            <begin position="1"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00032005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU364006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO58609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="14231" checksum="188CB778CF3A5542" modified="2011-01-11" version="1">MKDQLIQKALEARKQAYVPYSNFQVGAAVLGSDGTVYHGCNVENASYGLCNCAERTAIFKMVSEGCRKIDSIAVAADTEGPVSPCGACRQVISEFAHQDTKIYLTNLHGNTEEWTMEQLLPGAFRPADLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBL7</accession>
    <name>E3EBL7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_22970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373373.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4895"/>
    <dbReference type="EnsemblBacteria" id="ADO58835">
        <property type="protein sequence ID" value="ADO58835"/>
        <property type="gene ID" value="PPSC2_22970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4864"/>
    <dbReference type="eggNOG" id="ENOG50345CI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_170311_0_0_9"/>
    <dbReference type="OMA" id="DEAGHWM"/>
    <dbReference type="OrthoDB" id="1996697at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="111" mass="12798" checksum="98F5BFADEA919108" modified="2011-01-11" version="1">MDELIGQLENLTADLMNRLNVTSYEEMVRFVESRQLLVNELEELLKLSAADVGQTDRIKNLLSNDTAIISRMNFLKGEAADWLQQRNMAKVQRNAYETAYSSDAILMDRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBM1</accession>
    <name>E3EBM1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ndp-hexose methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_22990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58839.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4899"/>
    <dbReference type="EnsemblBacteria" id="ADO58839">
        <property type="protein sequence ID" value="ADO58839"/>
        <property type="gene ID" value="PPSC2_22990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4868"/>
    <dbReference type="eggNOG" id="COG0500">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050039_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013691">
        <property type="entry name" value="MeTrfase_14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08484">
        <property type="entry name" value="Methyltransf_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_14" evidence="1">
        <location>
            <begin position="282"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58839.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="401" mass="45457" checksum="D721734CDE03AE3B" modified="2015-05-27" version="2">MGASKVDNISCPICKSTNIAAVLTRKNIPVYQNLLINTSEDAKQIPKGDLEIVRCIDCGFVYNCIFDENKVIYNSAYENTQSYSSYFDDYLNDLVNTLVTKKGVCNMNIVEIGCGKGFFLKKLVEAGDNYGYGFDPSYIGPEVDLNGRLKFEKRLYDEESIHINADAILCRHVIEHIPDPLILLKSLRKTLVHSPNARVFFETPCVDWIFNNKIMFDFFYEHCSYFNKHSISKVFELAGFDVLSIEHIFNGQYMWVEARPVEGARNAQNTNYSECSDTSSIDFTQNEVEWKRRALKQFSEYSKLGKTAVWGAGAKGVTLLNLIDPELKFIDCVIDVNPNKVGNYLPGTGHEIVGIESLSNKGLSTIIVTNSNYLDEIIKVVKQKGLKIKLVDIENWYTQQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBP7</accession>
    <name>E3EBP7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_23105</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373403.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10590"/>
    <dbReference type="EnsemblBacteria" id="ADO58865">
        <property type="protein sequence ID" value="ADO58865"/>
        <property type="gene ID" value="PPSC2_23105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4894"/>
    <dbReference type="eggNOG" id="COG4632">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010728_1_0_9"/>
    <dbReference type="OMA" id="WRFAVMS"/>
    <dbReference type="OrthoDB" id="1242748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008964">
        <property type="entry name" value="Invasin/intimin_cell_adhesion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018711">
        <property type="entry name" value="NAGPA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09992">
        <property type="entry name" value="NAGPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49373">
        <property type="entry name" value="SSF49373"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAGPA" evidence="2">
        <location>
            <begin position="244"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="1">
        <location>
            <begin position="782"/>
            <end position="827"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="1">
        <location>
            <begin position="811"/>
            <end position="902"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="905" mass="95359" checksum="D7AACF0F4E2FC549" modified="2011-01-11" version="1">MFLSNRKHSKVKVDGKGIAKRWAVLTLAGVLWVGPVAGTGVLIPLNNWISAPIASAASGSTVKLGEEIITSGATLLKYRFKGSKGTALADIIRVDLQNPYVKLDVMTGKNGQFTTRQSTGGMAKETGAVAGVNGDYFNTSSEGAPIGGQVSKGVLMSTPSDLTGMYAFAVTKDGSPMVEQFTFEGTVKAGDGSSFSLAGMNKASYSPETSGSSYSHSNAMYIYTSAWKAIERPKNSSTTPTEILVQNGVVTQVSENATLNMTVPQDGYILRTHGKAAEYAKAHLTVGQTVETNYHLRVKSTGSEVDPSNLQMMIGGHTILVNDGQKTSFSRSTTSIGGTRARTALGYSRDKRYAYVIAVEKNGNSVGVSLSELQTLMKDIGVWKGMNLDGGGSTTMVTRDLGDTTAGLTFNTEYGTEQRSIVNGVGVYTTAPKGTLKGFTIKGNKTLLIGQTGSYSFKGYDNYYNPFDTSKVQVTWKSGNPAVVSVSGGVVKGAKPGTATLTASSGSASATTKVTVLGADEISSLTAGSGTGSLTAGAKIAVPITAKTKDGQSVSITSDALKWEFIGFKGSVKDNQLTVNTVDAGVKTGYAIGRYDGFSAVVFLSAGGASTNNWENFENVSYPVDFTSNAEGVTGTAAVVQGDGDHANSKVLELSYDMTNGSGKMYAYAQLNGTSGKTLEQAATSISIDVKGDKSLNWLRAELEDAQGKTAYIDLAKVIDWNGWKTINADMSGLNISYPAKLKRLYVVNVAEGQDERAKTGKVAFDNISFNTPGTVGTEGLKKGTAQMTIGQKSMTVNGTPTTIDAAPMNRNGSTYVPIKYVLDAFGGQAKWNAGDQRITIMRGGVLMDLTVGKKELILNGKRKSSEVAPIVLGGRTLVPLRLVSEQLGMTVKWEQETKTITLQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC05</accession>
    <name>E3EC05_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373663.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11850"/>
    <dbReference type="EnsemblBacteria" id="ADO59129">
        <property type="protein sequence ID" value="ADO59129"/>
        <property type="gene ID" value="PPSC2_24335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5153"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021021_1_1_9"/>
    <dbReference type="OMA" id="VEPPFAD"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168346" evidence="1">
        <location>
            <begin position="23"/>
            <end position="555"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="555" mass="62557" checksum="A540158BF11C2CB2" modified="2011-01-11" version="1">MTSKRFGIISLVMVMMASMITACSGSSDKEPASGDSKEKVTFTYFNATAGRDINTNETRIGKVLEDQTGVNWKLEHLVGDSNTKIGTFIASNDYPDVIVPDGTIDKLLDAGAFIPLNDLIDKYGPNIKRVYGPYYNLMKAEDGNIYFLPFSAVVGDYLSAPNIEQGAFWIQRRVLKEAGYPKIKTLDEYLALIRNYTKKHADEGLTGYLALTTQDRFYALTNAPMHLAGYPNDGGTIIDMKTHQATDYGDKDITKRYLKELNQLNAEGLFDKSSFVDNYDQYLAKLTSGKVLGFFDYRWQAGQALNNLQEASKRSGNDDLEYVGLPVVYDRNIKDQYLDPSSFVNNRGIGITVSAKDPVRIIKFFNNLLTDENQVLSNWGIKGETYDVDKNGRFYRTKEQIKKTGEDAFRDSFGFKYFEYSWPRYGNGSSLPDGNSASPGRQPEVARMSYTEGDKKLLKANGVESFSQMFSAPDERPWFPAWSIQVAQGSPAQIFQQKKGDLQRKYFPRLVLSAPAQFDAIWNEYTTEFNKLDVKAFEELITKEVAKKVKTVGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC58</accession>
    <name>E3EC58_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-352</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-352</name>
        <name evidence="1" type="ORF">PPSC2_01090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368844.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54201">
        <property type="protein sequence ID" value="ADO54201"/>
        <property type="gene ID" value="PPSC2_01090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.206"/>
    <dbReference type="HOGENOM" id="CLU_2667672_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8663" checksum="C81B77D16D20600A" modified="2011-01-11" version="1">MEITLKQVSREYTVYGGTIKDEKIYYSYMVRVEGGDVSQAVIMEMVNGLPLAVTEKTFKEIVSRIEQRIRQNESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC83</accession>
    <name>E3EC83_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YxbC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yxbC</name>
        <name evidence="2" type="ORF">PPSC2_01205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368869.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0239"/>
    <dbReference type="EnsemblBacteria" id="ADO54226">
        <property type="protein sequence ID" value="ADO54226"/>
        <property type="gene ID" value="PPSC2_01205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.231"/>
    <dbReference type="eggNOG" id="COG2850">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072054_0_0_9"/>
    <dbReference type="OMA" id="HFDAYTN"/>
    <dbReference type="OrthoDB" id="1885303at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003347">
        <property type="entry name" value="JmjC_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08007">
        <property type="entry name" value="Cupin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00558">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51184">
        <property type="entry name" value="JMJC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="JmjC" evidence="1">
        <location>
            <begin position="99"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="333" mass="37820" checksum="AAB9FC229010E488" modified="2011-01-11" version="1">MSTIDKKDTVLSKVLNPFSSDIFIREHWAPSKHLVIHGNVERFHQLPGISNVQSLDNIIDLYKGPVMVVGNAVIEETGGIADRFLVSTEEAKDWYERGAALEFDFSDMFLPQLHSWMDSLRKELSLPSGSGIKAIVYAAKNGGGFKAHFDAYTNFIFHLQGTKTWKLLANENVTNPIQHYDLAEKPYIPDELATYWKGEHPQTDLPGADIVNLLPGSFLYLPRGIWHSTSSTEETLSLNITFSHPAWLELLLAEIRSRLTQHDTWRELACDINLLSPEEQESLKSKLNQELNQVLPGFSSISAEDIFKRHTEEFDIYHVTQAVFRQLLATREL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECA6</accession>
    <name>E3ECA6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ring-cleaving dioxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydfO1</name>
        <name evidence="2" type="ORF">PPSC2_01305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368891.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14025"/>
    <dbReference type="EnsemblBacteria" id="ADO54249">
        <property type="protein sequence ID" value="ADO54249"/>
        <property type="gene ID" value="PPSC2_01305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.257"/>
    <dbReference type="eggNOG" id="COG0346">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057821_0_0_9"/>
    <dbReference type="OMA" id="DHAIRGF"/>
    <dbReference type="OrthoDB" id="1335734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="7"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="152"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="316" mass="34967" checksum="10B66017DCEF2CEF" modified="2011-01-11" version="1">MSLQTTGIHHITAFAGNPQANVDFYAGILGLRLVKKTINFDAPEVYHLYFGNEAGSPGTIITFFPAPGTPKGRIGGGQVGTTSYVVPLGSLDFWQHRLKSFGIQVTKTSRFNEQYLQFEDNEGLRLELVERAEGASSTWSYDGISADKAIKGFGGAVLFSANPQKTMDALESILGFTKIDEDAEYARYQSAGEIGNIVDVPLVKMGLGFGGAGTVHHIAWRAKDFEQHEEWRSAVQHYGYQPTPIIDRQYFNAIYFREAGGILFEIATDPPGFANDEPAESLGQKLMLPEWYEPQRAQIEANLHPIEVRTLTDKQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECH3</accession>
    <name>E3ECH3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Alcohol dehydrogenase</fullName>
            <ecNumber evidence="5">1.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PPSC2_01630</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a primary alcohol + NAD(+) = an aldehyde + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:10736"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15734"/>
            <dbReference type="ChEBI" id="CHEBI:17478"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a secondary alcohol + NAD(+) = a ketone + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:10740"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17087"/>
            <dbReference type="ChEBI" id="CHEBI:35681"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 7">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368958.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3ECH3"/>
    <dbReference type="STRING" id="1406.LK13_14400"/>
    <dbReference type="EnsemblBacteria" id="ADO54316">
        <property type="protein sequence ID" value="ADO54316"/>
        <property type="gene ID" value="PPSC2_01630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.326"/>
    <dbReference type="eggNOG" id="COG1064">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026673_20_1_9"/>
    <dbReference type="OMA" id="GLKMTDT"/>
    <dbReference type="OrthoDB" id="969875at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029752">
        <property type="entry name" value="D-isomer_DH_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00065">
        <property type="entry name" value="D_2_HYDROXYACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="8">
        <location>
            <begin position="8"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="338" mass="36307" checksum="DD2E954FF434A86F" modified="2011-01-11" version="1">MKAAIVTKDKKVSVEEKPLRSLKHGEALVQVEYCGVCHTDLHVKNADFGDVTGRVLGHEGIGKVIELGEGVTSLKVGDRVSIAWMFESCGHCEYCLTGRETLCREVKNAGYTVDGAMAEQCIVTADYAVKVPDNLDPAAASSVTCAGVTTYKAVKVSDIRPGQWIGIFGIGGLGNLAVQYAKNVFNAKVVAFDISDEKLELAKKIGADYIVNSMKEDPVARAKELTNGAGLDATVVTAVAKTPFNQAIDVVKAGARVVAVGLPTDKMDLDIPRLVLDGIQVIGSLVGTREDLKEAFQFAAEGKVVPLVQKRPLEDINEIFEEMEHGKIQGRMVIDFTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECT7</accession>
    <name>E3ECT7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FAD-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-534</name>
        <name evidence="2" type="ORF">PPSC2_01940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369021.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14705"/>
    <dbReference type="EnsemblBacteria" id="ADO54381">
        <property type="protein sequence ID" value="ADO54381"/>
        <property type="gene ID" value="PPSC2_01940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.390"/>
    <dbReference type="eggNOG" id="COG1249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029779_1_0_9"/>
    <dbReference type="OMA" id="IWIFPTT"/>
    <dbReference type="OrthoDB" id="1513550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008734">
        <property type="term" value="F:L-aspartate oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005288">
        <property type="entry name" value="NadB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42716">
        <property type="entry name" value="PTHR42716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="536" mass="60293" checksum="389CA33753FB6321" modified="2011-01-11" version="1">MTQKRLDADIVVIGGGLGGTSAALAAAKAGMRVIMTEETDWLGGQLTSQAVPPDEHRWIEQFGCTATYREFRNRVRDYYRQNYPLTEEAYNDPILNPGNGWVSRLAHEPRVALQVLEDMLAPYLNTGRVRVYYHTVPIAAQTDGDSITSVTVRTSYNPDHKSGLRVLHGTFYLDATECGDLLPMAGVEHTSGAESRAATGEPHALEYANPLDMQSITHVAAVDYIPQESFIIERPQQYDFWRNYIPSFSRFPILSWFATDADDTSKLKQFTLFPNDQGIVSLWDYRRIVDPSIWSEPLNDGEVTLLNWAQNDYYLGPLIGVTAQEQARHREGARELTRSLIYWLQTEAPRLDGGFGYPGIRPRGDFLGTSDGLAKTAYIRESRRIKAKYTISEFDVSRELRGKEGPKRYSDSVGVGSYHLDLHPTTVSQRTFYIPNYPYEIPLGSLIPVRVRNLLPACKNIGMTQIANGCYRLHPTEWNIGESSGSLAAYCVSNGVYPIEVSRSEEHLGRFQNVLLRQGVELHWPVEVFEPEGVTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDP7</accession>
    <name>E3EDP7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Threonine-phosphate decarboxylase</fullName>
            <ecNumber evidence="5">4.1.1.81</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">L-threonine-O-3-phosphate decarboxylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cobD</name>
        <name evidence="11" type="ORF">PPSC2_06620</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + O-phospho-L-threonine = (R)-1-aminopropan-2-yl phosphate + CO2</text>
            <dbReference type="Rhea" id="RHEA:11492"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58563"/>
            <dbReference type="ChEBI" id="CHEBI:58675"/>
            <dbReference type="EC" id="4.1.1.81"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.81" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369986.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19585"/>
    <dbReference type="EnsemblBacteria" id="ADO55355">
        <property type="protein sequence ID" value="ADO55355"/>
        <property type="gene ID" value="PPSC2_06620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1363"/>
    <dbReference type="eggNOG" id="COG0079">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_3_2_9"/>
    <dbReference type="OMA" id="RDPWSVN"/>
    <dbReference type="OrthoDB" id="1248286at2"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048472">
        <property type="term" value="F:threonine-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005860">
        <property type="entry name" value="CobD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01140">
        <property type="entry name" value="L_thr_O3P_dcar"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="8" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="10">
        <location>
            <begin position="24"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="366" mass="39958" checksum="24244F2278E49027" modified="2011-01-11" version="1">MIEVYGHGGDRETAAATFGGAAADFVDFSANINPLGPPPEVLEALQSSLDTVIRYPDPGHRHFKNMLARRLQVPPEALSIGNGAAESMALLLLGLAPKRVGTVEPCFSEYAELAGKFGAEIHRVYGKASLQWKADVEDILQLMEQVDVLFLGQPNNPNGVQYGEQELYELAEAAGRTGTVLVVDEAFIDFIPLERQISLLPVLERYPHVILIRSMTKFYAIPGLRLGYAIAHPDYIRQMTAKQVTWSVNGLALLAGEACLRSGQAYERRTQELIATERSRLLAALAEWGCGVVPGEANYVLARAPGTWSASAIQQALGQRGILIRSCAMYPGLSASHFRIAVKDAEANNMLLSALSEVLEEERRDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDT2</accession>
    <name>E3EDT2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HD family phosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">M1-161</name>
        <name evidence="3" type="ORF">PPSC2_00045</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368652.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13060"/>
    <dbReference type="EnsemblBacteria" id="ADO53997">
        <property type="protein sequence ID" value="ADO53997"/>
        <property type="gene ID" value="PPSC2_00045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.10"/>
    <dbReference type="eggNOG" id="COG2206">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_92_1_9"/>
    <dbReference type="OMA" id="HDIGNAK"/>
    <dbReference type="OrthoDB" id="1094814at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037522">
        <property type="entry name" value="HD_GYP_dom"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51832">
        <property type="entry name" value="HD_GYP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD-GYP" evidence="2">
        <location>
            <begin position="124"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO53997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="362" mass="40761" checksum="3713576C8832F62E" modified="2011-01-11" version="1">MTTVPVSELKAGLKLQSDVFTEMGSLLLPKGRILLPRDLEILEAFLIQQVEVGTDDIAKSGSEPTTVRSGTAESQGASLDGRDESEQFQDEYDKMVMLVKNAFQSVLVSNLSIYELRGQLESLLAHIQRYNVMTYTPPAMIEVDYIFHNAVLTSLTSYSIAQWIGLPQKDWMQVAFAGLLHDIGNAKMDPSILYKPSQLTQEEQEEVRRHTSLGYQLLKNVKAINEGVRLAALQHHEKVDGTGYPLRLKGEQIHIYAKIVGVADVFHAMTLEKTYRPAQSPYLVLEQIKSESFGKLDPSVVQVFIQKLTQFNNGTKVRLNDNRTGEIIFADRDHPTRPLIQVDGEIINLMLQREIYIECIVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDZ4</accession>
    <name>E3EDZ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Gluconokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gntK1</name>
        <name evidence="4" type="ORF">PPSC2_02500</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FGGY kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369114.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15235"/>
    <dbReference type="EnsemblBacteria" id="ADO54474">
        <property type="protein sequence ID" value="ADO54474"/>
        <property type="gene ID" value="PPSC2_02500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.484"/>
    <dbReference type="eggNOG" id="COG1070">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009281_3_2_9"/>
    <dbReference type="OMA" id="AAYQKKW"/>
    <dbReference type="OrthoDB" id="1619686at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046316">
        <property type="term" value="F:gluconokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019521">
        <property type="term" value="P:D-gluconate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000577">
        <property type="entry name" value="Carb_kinase_FGGY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018483">
        <property type="entry name" value="Carb_kinase_FGGY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006002">
        <property type="entry name" value="Gluconate_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000538">
        <property type="entry name" value="GlpK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01314">
        <property type="entry name" value="gntK_FGGY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00445">
        <property type="entry name" value="FGGY_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FGGY_N" evidence="2">
        <location>
            <begin position="6"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="3">
        <location>
            <begin position="260"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="515" mass="56841" checksum="05E0995109A6D1F5" modified="2011-01-11" version="1">MTETRYMIGVDIGTTSTKAVLFEENGNIAAQHHVGYPLHTPEPDAAEQDPEDIFKAVVATVQEVMTQSGVPAEHVLFVSFSSAMHSVLAVDKNGKPLTASITWADNRSAKWAEALKHKYNGHDIYLRTGTPIHPMSPLTKLMWITRDLPDVAAQTYKFISIKEYVFARLFHQYVVDHSIASATGLMNLKQLDWDEEALTIAGVTKEQLSELVPTTHVLKGLDAAYAHDMGLLETTPFVIGASDGVLSNLGVNAIKPGVVAVTIGTSGAIRTVVDKPLTDAKGRFFCYALTEKLWVIGGPVNNGGIVFRWIRDEFAASEVETAKRLGIDPYHVLTQIAEQVRPGSDGLLFLPYLSGERAPLWDPNARGSFFGLSLRHKKEHMIRAALEGVLFNLYTVMLAMEEVIDRPSVIHATGGFARSELWRQLMADIFDQEVIIPESLESSCLGAAILGLYALGRIDSLDAVSGMIGTTHQHKPAAEHVDIYRDLLPIYIRISRKFEEEFKDIAEFQAKSLQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE69</accession>
    <name>E3EE69_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_04945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369625.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17840"/>
    <dbReference type="EnsemblBacteria" id="ADO54992">
        <property type="protein sequence ID" value="ADO54992"/>
        <property type="gene ID" value="PPSC2_04945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.996"/>
    <dbReference type="eggNOG" id="COG0561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083285_1_0_9"/>
    <dbReference type="OMA" id="PLSYMTE"/>
    <dbReference type="OrthoDB" id="1501962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006380">
        <property type="entry name" value="SPP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024197">
        <property type="entry name" value="UCP030802"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05116">
        <property type="entry name" value="S6PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF030802">
        <property type="entry name" value="UCP030802"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S6PP" evidence="1">
        <location>
            <begin position="4"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31178" checksum="17FD3485AEF7C6EC" modified="2011-01-11" version="1">MIYASDLDQTLIYSKRSLGVPLESPGLLPAEQIDGATSAFISAQALQWLKTLPADVMFMPVTTRTMEQYRRITVFQTELVPAYAVTSNGGNIIVGGEVDREWNRRIHEQVRRDGAHAEEARQVFGQVLHEDWVVSERFCDELFYAFVIERDRMPLEQVLEKARMMHEMGWEVSIQGRKVYLVPAAVNKQAAVEHIRNLTNGGAVVASGDSLLDRCLLDYADYAIAPRHGELYREQLRDKLEVNYRFTEVSGVYAADEIMEYVYEVHGSISAARTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE93</accession>
    <name>E3EE93_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369649.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1034"/>
    <dbReference type="EnsemblBacteria" id="ADO55016">
        <property type="protein sequence ID" value="ADO55016"/>
        <property type="gene ID" value="PPSC2_05060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1022"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_9_0_9"/>
    <dbReference type="OMA" id="NIDYKAY"/>
    <dbReference type="OrthoDB" id="968232at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05324">
        <property type="entry name" value="carb_red_PTCR-like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045313">
        <property type="entry name" value="CBR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="26033" checksum="849CFBE9C2C96FB4" modified="2011-01-11" version="1">MNKSKIVLITGGNKGIGFETARQLGNMGYEILIGARSEEKGHEAVTFLETENIKAKTVVLDVTNPSSVLSAVEWIEQEYGYLDILINNAGVFFEGNTPPSELELSVLKNTYETNVFGVFSVTKTILPLLKKSSAGRIVNLSSGLGSLTLNSDPTSEFYNVNSLAYNSSKTAVNALTVFFAKELRDTPIKINSVCPGFTATDLNGNSGYRTVEQAASSVVKLATINNDGPTGSFFDENGVVPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEF1</accession>
    <name>E3EEF1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Ferrichrome ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fecD3</name>
        <name evidence="8" type="ORF">PPSC2_06840</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370033.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19810"/>
    <dbReference type="EnsemblBacteria" id="ADO55402">
        <property type="protein sequence ID" value="ADO55402"/>
        <property type="gene ID" value="PPSC2_06840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1409"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_1_0_9"/>
    <dbReference type="OMA" id="WYSARLH"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="64"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="194"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="238"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="277"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="306"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="335" mass="35447" checksum="3C8499431393BD0D" modified="2011-01-11" version="1">MGKKLISPYVVIFVSPLFIVLTLLLSVMYGAKTIEWETVTASFFHFDAGNVDHQVVLNSRLPRAVGSILIGAFLAISGAIMQGMTRNFLASPSIMGVSDGAAFVITLMMILAPNSTSMGLIGSSFVGSALGVAIVFGLAWMIPGGLAPVRMAILGTIIGTFLSSLSAVLSIYFNVSQNVSFWFNARLHQMDPDMIQLAIPLALVAIVGAMLLAKPITLLSLGDDVATGLGQRALPVKLGAMLCVALLTGVSVALAGKIAFVGLLIPHITRYLIGVDYRWVIPCSGLIGGLFLGMSDVLSRFLNYPFETPIGVVTSVIGIPFFLYLIRRKGGGEHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEK0</accession>
    <name>E3EEK0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 9">Acetolactate synthase</fullName>
            <ecNumber evidence="4 9">2.2.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ilvB3</name>
        <name evidence="13" type="ORF">PPSC2_07070</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>H(+) + 2 pyruvate = (2S)-2-acetolactate + CO2</text>
            <dbReference type="Rhea" id="RHEA:25249"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="2.2.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="9">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
        <text evidence="9">Binds 1 thiamine pyrophosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 1/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="4 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370079.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20050"/>
    <dbReference type="EnsemblBacteria" id="ADO55451">
        <property type="protein sequence ID" value="ADO55451"/>
        <property type="gene ID" value="PPSC2_07070"/>
    </dbReference>
    <dbReference type="GeneID" id="66573522"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1459"/>
    <dbReference type="eggNOG" id="COG0028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013748_1_2_9"/>
    <dbReference type="OMA" id="CFGTSGP"/>
    <dbReference type="OrthoDB" id="391134at2"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00055"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd02015">
        <property type="entry name" value="TPP_AHAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012846">
        <property type="entry name" value="Acetolactate_synth_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039368">
        <property type="entry name" value="AHAS_TPP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00118">
        <property type="entry name" value="acolac_lg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6 9 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="12">
        <location>
            <begin position="25"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="10">
        <location>
            <begin position="216"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="11">
        <location>
            <begin position="407"/>
            <end position="554"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO55451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="581" mass="63238" checksum="68875341DAFFC339" modified="2011-01-11" version="1">MSAQIPEVRSTDELRQKWMKPEVITGSEILLRSLLLEGVECVFGYPGGAVLYIYDAMYGFKDFKHVLTRHEQGAIHAADGYARASGKVGVCIATSGPGATNLVTGIATAYMDSVPLVVITGNVVSSLIGTDAFQEADITGITMPITKHSYLVRDVEDLPRIIHEAFHIANTGRKGPVLIDIPKDVSAAQTLFVPQTEPVTMRGYNPNVLPNKIQLDKLTQAIAEAERPFILAGGGVVYSGGHEALYEFVRKTEIPIATTLLGLGGFPSGHELWTGMPGMHGTYTSNQAIQQSDLLICIGARFDDRVTGKLDGFAPQAKIVHIDIDPAEIGKNVAADIPIVGDVKAVLELLNQDVKRADLADAWRAQIQQWKAAKPFSYKDSETVLKPQWVIELLDKTTKGGAIVTTDVGQHQMWAAQYYKFNQPRSWVTSGGLGTMGFGFPSAIGAQMANPDRLVISINGDGGMQMCSQELAICAINNIPVKIVIINNQVLGMVRQWQELIYNNRYSHIDLAGSPDFVKLAEAYGVKGLRATNKEEARRAWQEALDTPGPVVVEFVVSKEENVYPMVTQGSTIDQMLMGDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEL2</accession>
    <name>E3EEL2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20760"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55699">
        <property type="protein sequence ID" value="ADO55699"/>
        <property type="gene ID" value="PPSC2_08155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1715"/>
    <dbReference type="eggNOG" id="COG1215">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2227">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_307744_0_0_9"/>
    <dbReference type="OMA" id="DEHTHYW"/>
    <dbReference type="OrthoDB" id="25808at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="276"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="276"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="949" mass="108648" checksum="D367B47D29249262" modified="2011-01-11" version="1">MRILIGSPVHQKPEILSLFLQALERLETPDVLPDYLFVDDNDNPISSQWLVEFSNRLPGRVLPLLTGSQQVENRSDEHTHYWPPALVWKVAGFKNRLIEYALQHNYDALFLVDSDLVLHSRTLCRLVETEKDIVSEIFWTRWQPEGPLLPQVWVSDEYNLFHREDGEVLSKEERAQRELHFIHQLHIPGLYEVGGLGACTLIRRRALEAGIHFGKIKNVSYWGEDRHFCIRAAAYGFPLFVDTHYPAMHLYREADRMKAEQLLFTLKYFTSNHSEQVTHAEHSDTSPSSPAFNHSASSRTPKFPEPPVIPDHLHETAVFAKYTADSFVVPPTFTGPRQSELYTPPVSNPKLTLTMTVYNEADHKLTDVLLSHRKYIDEAVIIDDGSHDDSGELCREILQGIPLRLIRNETPSFTNEVELRKQQWRETLASSPEWILSMDADEMFESRFAQGVHSLLAGTTADTICFRLFDMWSSTHYRDDEYWQAHRYYRPFLIRYKEGFPYKWREQSLHCGRLPENILDLPTEISNYRIQHWGWYTPAIRMAKFERYQLLDPSARYGWKEQYESILDSNPQLTLWVDQDNKNTEKEPTPEYEPAHQVDASDVAKVASVQVMNKLEPQIKSETKDTFYATEKGKGAEQSVKCKLCGSSDTVVFHDYQRFTLMGCGSCGLVFRKDVDHIQSEEMIAEIYNANWVAMRDSAAASTYGDHALFGLMLLDMFSPRKGKLLEIGSGTGEFIHAALQAGWNAVGIEPSSDSRAYAKSKYEVDLLPGYWNGETELDAQTQQSVEVEIYQAHEAQEGIEAESLEEELDLSLEHPYEAIACWHVLEHIADPVAFLTDLCEQLQPDGTLYITVPNKNSFTNEAYGVHSPLFTEEDHLYHYSDHTLTLLLEKSGLRPVALFTRQLPAGLDALLQAHPLYGELAFTEQMGLLAKLQGEKRGHELCCVAKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEM3</accession>
    <name>E3EEM3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370333.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20810"/>
    <dbReference type="EnsemblBacteria" id="ADO55710">
        <property type="protein sequence ID" value="ADO55710"/>
        <property type="gene ID" value="PPSC2_08205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1725"/>
    <dbReference type="eggNOG" id="ENOG50339KU">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_183006_0_0_9"/>
    <dbReference type="OMA" id="FKKWKHG"/>
    <dbReference type="OrthoDB" id="1817842at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="94" mass="10788" checksum="836228A173C6E518" modified="2011-01-11" version="1">MGSFKKWKHGMYTLIALAMVLVALPRISLAGGLNWVNGFGMVWVLFALLVIGANLHFLLGVDEEKRKTLERVRRAKMQQWQMKWDNKADKGNML</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEU6</accession>
    <name>E3EEU6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Aldehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fusE</name>
        <name evidence="5" type="ORF">PPSC2_00395</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368715.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EEU6"/>
    <dbReference type="STRING" id="1406.LK13_13410"/>
    <dbReference type="EnsemblBacteria" id="ADO54069">
        <property type="protein sequence ID" value="ADO54069"/>
        <property type="gene ID" value="PPSC2_00395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.79"/>
    <dbReference type="eggNOG" id="COG1012">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_675866_0_0_9"/>
    <dbReference type="OMA" id="SERAMGC"/>
    <dbReference type="OrthoDB" id="293754at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006081">
        <property type="term" value="P:cellular aldehyde metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012394">
        <property type="entry name" value="Aldehyde_DH_NAD(P)"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43570">
        <property type="entry name" value="PTHR43570"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="4">
        <location>
            <begin position="149"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="407" mass="46879" checksum="7DD0C9F2E5FEC61E" modified="2011-01-11" version="1">MSINPELAENTLFLKRHESILKCLNYLIENRQEVMDILTQFSSYRAANAEIDSTILTLQGALQEVQTHQPSWQRSMAVFMPSNVILYSYALYLLIPSLYVENIDFRPSSHVNEYVNMLHEKLQAVHELPIYIRKVSQKVFMENSVMPADIVVFTGSYTNAEKIKKQIRKDQLYIFYGQGINPFIIGPDADLELAVTDVIRMRLFNSGQDCLGPDIILVHQEVSEPFKNLLIQRLDELVFGANNDPNANYSPIFYKDTLYSVSEYFNTNDKFIIYGGGIDFRTKKMEPTVVYSELDQNLEIIEYFSPVFNVVSYQDDEQLIKRISSSYFSERAMGCSLYGSEHLTDVLRKKHTLTINQTLEDVDQGNKPFGGYGTMSNYIFYDYKLVSKPILISEIVAEYLSEKRSLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEV2</accession>
    <name>E3EEV2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 15">Inosine-5'-monophosphate dehydrogenase</fullName>
            <shortName evidence="8">IMP dehydrogenase</shortName>
            <shortName evidence="8">IMPD</shortName>
            <shortName evidence="8">IMPDH</shortName>
            <ecNumber evidence="8 15">1.1.1.205</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 17" type="primary">guaB</name>
        <name evidence="17" type="ORF">PPSC2_00440</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 15">
            <text>H2O + IMP + NAD(+) = H(+) + NADH + XMP</text>
            <dbReference type="Rhea" id="RHEA:11708"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="EC" id="1.1.1.205"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="8">Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8 15">Purine metabolism; XMP biosynthesis via de novo pathway; XMP from IMP: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 14">Belongs to the IMPDH/GMPR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.205" evidence="8 15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368721.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13455"/>
    <dbReference type="EnsemblBacteria" id="ADO54075">
        <property type="protein sequence ID" value="ADO54075"/>
        <property type="gene ID" value="PPSC2_00440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.85"/>
    <dbReference type="eggNOG" id="COG0516">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0517">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022552_2_1_9"/>
    <dbReference type="OMA" id="MGYCGAK"/>
    <dbReference type="OrthoDB" id="532857at2"/>
    <dbReference type="UniPathway" id="UPA00601">
        <property type="reaction ID" value="UER00295"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003938">
        <property type="term" value="F:IMP dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006177">
        <property type="term" value="P:GMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00381">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01964">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005990">
        <property type="entry name" value="IMP_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015875">
        <property type="entry name" value="IMP_DH/GMP_Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001093">
        <property type="entry name" value="IMP_DH_GMPRt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11911">
        <property type="entry name" value="PTHR11911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00478">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000130">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01302">
        <property type="entry name" value="IMP_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00487">
        <property type="entry name" value="IMP_DH_GMP_RED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-0129">CBS domain</keyword>
    <keyword evidence="3 8 15" id="KW-0332">GMP biosynthesis</keyword>
    <keyword evidence="2 8 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 11 15" id="KW-0520">NAD</keyword>
    <keyword evidence="6 8 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 8 12" id="KW-0630">Potassium</keyword>
    <keyword evidence="4 8 15" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="16">
        <location>
            <begin position="95"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="16">
        <location>
            <begin position="155"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="8 10">
        <location>
            <begin position="339"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="8 10">
        <location>
            <begin position="362"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="8 10">
        <location>
            <begin position="386"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="active site" description="Thioimidate intermediate" evidence="8 9">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8 9">
        <location>
            <position position="402"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="249"/>
            <end position="251"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <begin position="299"/>
            <end position="301"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 12">
        <location>
            <position position="301"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 12">
        <location>
            <position position="303"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="304"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 12">
        <location>
            <position position="306"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="414"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="468"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <note>ligand shared between two tetrameric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="469"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <note>ligand shared between two tetrameric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="470"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <note>ligand shared between two tetrameric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000130-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000130-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000130-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000130-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO54075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="485" mass="52261" checksum="2627C7CFF58240FD" modified="2011-01-11" version="1">MWEDKFGKEGLTFDDVLLVPRKSVVLPKEVSVATRLSDNVKLNIPLMSAGMDTVTEAVLAIAMAREGGIGVIHKNMSIEQQAVEVDRVKRSESGVITNPFSLTPDHLVSDAEAVMGKYRISGVPVVNEENKLVGIITNRDLRFIHNFDLKISEVMTKEELVTAPVGTTLQEAEVILQKHKIEKLPLVDEGNYLKGLITIKDIEKAIQFPNAAKDAQGRLLVGAAVGISKDTFERTEALVKAGVDLIVVDSAHGHHINIIEAVRELRKTYPDLTIVAGNVATGDGTRELIEAGASVVKVGIGPGSICTTRVIAGIGVPQITAIYDCATVAREYNIPIIADGGIKYSGEITKAIAAGASAVMLGSLFAGTEESPGESEIYQGRRFKVYRGMGSMAAMKQGSKDRYFQDDDKKLVPEGIEGRVAYKGPLSDTVHQLLGGLRSGMGYCGTANIEELRNDTSFIRITGAGLRESHPHDVQITKEAPNYSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEX4</accession>
    <name>E3EEX4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">EnpEP protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pepN</name>
        <name evidence="6" type="ORF">PPSC2_00550</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="2">Binds 1 zinc ion per subunit.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368742.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13555"/>
    <dbReference type="EnsemblBacteria" id="ADO54097">
        <property type="protein sequence ID" value="ADO54097"/>
        <property type="gene ID" value="PPSC2_00550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.108"/>
    <dbReference type="eggNOG" id="COG0308">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015077_1_0_9"/>
    <dbReference type="OMA" id="GGMEYAM"/>
    <dbReference type="OrthoDB" id="771837at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034015">
        <property type="entry name" value="M1_LTA4H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014782">
        <property type="entry name" value="Peptidase_M1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027268">
        <property type="entry name" value="Peptidase_M4/M1_CTD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45726">
        <property type="entry name" value="PTHR45726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01433">
        <property type="entry name" value="Peptidase_M1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169154" evidence="4">
        <location>
            <begin position="34"/>
            <end position="670"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M1" evidence="5">
        <location>
            <begin position="353"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="36"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="1">
        <location>
            <position position="414"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="488"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="413"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="417"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="436"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR634015-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR634015-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="670" mass="75312" checksum="1EE3BD0332502C72" modified="2011-01-11" version="1">MTPARAKIVLLSSLALGLLAGTLWFAWQPQSQSAPQSAGKPLYGSESESALAPDMGKPLGANIMPDLPKNPPQPASEILSKRVVEYHIDVSLEKGRVLRGTETLTWKHPGKKTVNDLYLHLYPNAFSSMETTFMKESGGKLRGDTMPKDGFGSMTLTELKTEDGLSLMHRTQYVQPDDGNASDRSLMKVRLPKPVRGGEEITLYMKFEVKLPGIFARMGATDDFVMAGQWFPKLSVYETAGQRGRADEGWNLHQYHGNSEFYADFGIYSIRIRVPETHIVAATGFPTRGAVRQNGQKIYQFYADDVHDFAWSASPNFVAVEEPFSSTEVPGVKIKLYLDPSHKELKGRYMSAAKAALSYYSKWYGPYPYSTLSIVVPPKTGSGASGMEYPTLITAAAADQLNPGYNLERTLVHEIGHQYFYGMVANNEFEEPWLDEGFTSYAEERLMEQEYGLIPNLPLQSGQVASPQPLNRESWKYGSSAEYAQNAYSRGKLVLRGIERQVGTKKMDRIMRTYVQTYRFKHPTSQDFQRVVERVTGRSWSHYFEQYVYDGQMADFSVDRITNRKLENGYEAVVTLSKKGADYPKIPVQFTFKDGTTIFKAWDGTGKSTSFRLKSTSPVSYVTVDPLYTIALENKHINNSLKAELDEKQQTRWSVSVTKLLETLLGSLSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF92</accession>
    <name>E3EF92_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369688.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1073"/>
    <dbReference type="EnsemblBacteria" id="ADO55055">
        <property type="protein sequence ID" value="ADO55055"/>
        <property type="gene ID" value="PPSC2_05245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1063"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_091968_1_0_9"/>
    <dbReference type="OMA" id="RPSWGYA"/>
    <dbReference type="OrthoDB" id="1664438at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="58"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="28854" checksum="B87E5E3EEF7FAE28" modified="2011-01-11" version="1">MKYTEDREFLQLLEHHKQSFSGWDFSFISDTGRVASEPLDWSYASKALALIHSTKAMLDMGTGGGELLSQFRPFPEIICATEAYAPNIPIAKQRLEPLGVHVMAIHDDDSLPFGDAGFDLVLNKHESFSPAEVRRILRPGGTFLTQQAGGLDCAGLNARLGAPEYEYADWTLSQALAGLKSNGFEILEQQEQFPIQRFYDIGAIVYYLKVIEWQIADFQPEKYIEQLYGLYLDIKRDGYWDVKQHRFLIHARAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFH5</accession>
    <name>E3EFH5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Phenylalanine--tRNA ligase alpha subunit</fullName>
            <ecNumber evidence="13">6.1.1.20</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Phenylalanyl-tRNA synthetase alpha subunit</fullName>
            <shortName evidence="13">PheRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 15" type="primary">pheS</name>
        <name evidence="15" type="ORF">PPSC2_07130</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + H(+) + L-phenylalanyl-tRNA(Phe)</text>
            <dbReference type="Rhea" id="RHEA:19413"/>
            <dbReference type="Rhea" id="RHEA-COMP:9668"/>
            <dbReference type="Rhea" id="RHEA-COMP:9699"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58095"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78531"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="13">Binds 2 magnesium ions per tetramer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 13">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.20" evidence="13"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55466.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040103760.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20110"/>
    <dbReference type="EnsemblBacteria" id="ADO55466">
        <property type="protein sequence ID" value="ADO55466"/>
        <property type="gene ID" value="PPSC2_07130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1473"/>
    <dbReference type="eggNOG" id="COG0016">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025086_0_1_9"/>
    <dbReference type="OrthoDB" id="469058at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004826">
        <property type="term" value="F:phenylalanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006432">
        <property type="term" value="P:phenylalanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00281">
        <property type="entry name" value="Phe_tRNA_synth_alpha1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004529">
        <property type="entry name" value="Phe-tRNA-synth_IIc_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004530">
        <property type="entry name" value="Phe-tRNA-synth_IIc_mito"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004188">
        <property type="entry name" value="Phe-tRNA_ligase_II_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022911">
        <property type="entry name" value="Phe_tRNA_ligase_alpha1_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002319">
        <property type="entry name" value="Phenylalanyl-tRNA_Synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010978">
        <property type="entry name" value="tRNA-bd_arm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11538:SF41">
        <property type="entry name" value="PTHR11538:SF41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02912">
        <property type="entry name" value="Phe_tRNA-synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01409">
        <property type="entry name" value="tRNA-synt_2d"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46589">
        <property type="entry name" value="SSF46589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00468">
        <property type="entry name" value="pheS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 13" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="9 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 13 15" id="KW-0436">Ligase</keyword>
    <keyword evidence="10 13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11 13" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="14">
        <location>
            <begin position="106"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="256"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO55466.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="337" mass="38189" checksum="A0B9127D67B6047C" modified="2015-05-27" version="2">MKEHLLALKEEALEVLEKVATPKELADLRVKYSGKKGALTEILRGMGKLSAEERPVVGQVANEVREAIEEVVNRKQDEFTKAETNERLQAEKIDVTLPGRAMPQGGLHPLNKVIEQIEDIFTGMGYRVAEGPQAETDYYNFEALNLPKNHPARDMQDSFYLTEDLLMRTHTSPVQIRAMEAMKGETPIKVICPGTVFRRDDDDATHSFQFHQIEGLVIGKDIRMSDLKGTLLQFAREMFGESTEIRLRPSFFPFTEPSAEVDVTFVKKNGERVWIEILGCGMVHPKVLEMGGFDPEVYSGFAFGMGVERIAILKYGIDDIRHFYNSDLSFLKQFARQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFU2</accession>
    <name>E3EFU2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370433.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1842"/>
    <dbReference type="EnsemblBacteria" id="ADO55814">
        <property type="protein sequence ID" value="ADO55814"/>
        <property type="gene ID" value="PPSC2_08700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1832"/>
    <dbReference type="HOGENOM" id="CLU_1609212_0_0_9"/>
    <dbReference type="OrthoDB" id="1414501at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168187" evidence="1">
        <location>
            <begin position="25"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="19439" checksum="D211E589D07E5B20" modified="2011-01-11" version="1">MKKAVFSTLGLALLLSTSTAVASAQEAQEVAPALQKESIQPSNSWYADTEPNNWFDEITSEITVGDGIDIYGSLGRKIPGGYAGYYDFVDYYKFTASQSGFYEFNIQGEIYPKAWMRLSVADSNGSVKRSAEERQYRLGLNLKAGETYYLLVEATDADVGQLFDYRVTSTIKQIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFV2</accession>
    <name>E3EFV2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Glycerol-1-phosphate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">araM</name>
        <name evidence="11" type="ORF">PPSC2_08745</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370443.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21220"/>
    <dbReference type="EnsemblBacteria" id="ADO55824">
        <property type="protein sequence ID" value="ADO55824"/>
        <property type="gene ID" value="PPSC2_08745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1842"/>
    <dbReference type="eggNOG" id="COG0371">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038362_1_0_9"/>
    <dbReference type="OMA" id="DFICRST"/>
    <dbReference type="OrthoDB" id="717704at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032837">
        <property type="entry name" value="G1PDH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13685">
        <property type="entry name" value="Fe-ADH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="3" id="KW-0533">Nickel</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="10" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="41787" checksum="6759D72B79CC0E1C" modified="2011-01-11" version="1">MNMNEQIKLWNEEAQASNADHPHRKVELFIEVRDGALESIASYLIQQNYRHVTLVEDEHTSAAAGKKVAEFIREAGLTVDVVRLPPNAVGDVIADETYIMKVLLGVADQSQAVLAVGSGTIHDLVRFVCYKMNRPFLSVPTAASVDGFTSAGAPLIVDGSKQTFQAVPPEAIFADLSVLESAPQTMTAAGFGDMLGKFTSLVDWHVSRDLGNEPYSPVANRITEEALRACVEHVDEIAAGSKTGVEVLMNALIASGISMLMIDHSRPASGGEHHISHRIEMDFIAEGRKQVLHGAKVGVASALLSDMYRELAANQDVEAFKVYRTLPTSEQMRAWLAQVGGPSTIADLGVTQEQLDRALRTAHTLRDRYTGLKYMNEHQLLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFX2</accession>
    <name>E3EFX2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Heme biosynthesis protein HemY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370462.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21295"/>
    <dbReference type="EnsemblBacteria" id="ADO55844">
        <property type="protein sequence ID" value="ADO55844"/>
        <property type="gene ID" value="PPSC2_08830"/>
    </dbReference>
    <dbReference type="GeneID" id="66578173"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1862"/>
    <dbReference type="eggNOG" id="COG0316">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2300397_0_0_9"/>
    <dbReference type="OMA" id="GDHAHYG"/>
    <dbReference type="OrthoDB" id="1891602at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="SSF89360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11052" checksum="2801E8DCDF3BF71B" modified="2011-01-11" version="1">MNCKITRNAAKVLKLELDKEENQGKSLRVVITHAHGDHAHYGLDLDTPKETDTVVSTDKGIDVILESGQPLLDGVKIDYLYFPEEGFVITNPSQGNHGDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG70</accession>
    <name>E3EG70_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370869.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2291"/>
    <dbReference type="EnsemblBacteria" id="ADO56263">
        <property type="protein sequence ID" value="ADO56263"/>
        <property type="gene ID" value="PPSC2_10765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2280"/>
    <dbReference type="eggNOG" id="ENOG50333FA">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_939564_0_0_9"/>
    <dbReference type="OMA" id="KRIKNHQ"/>
    <dbReference type="OrthoDB" id="815683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="17"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="296" mass="33838" checksum="F7EBA0CA70408C0F" modified="2011-01-11" version="1">MEELVRSIQKQVRIKRFACWAGLIMFGLCTLVGIAAEEWFMALLGLAMTVLSIYGLTMMRGMTKFNKEYRPGKGYGYYRRTAQQKLRYLTWGQWILGGFIVLMFFIYHVRLSAFLIAILGILTIQFSIKKRIKNHQEPDVTELDEFVRMGIVSPHEQTIGVYKDFLHLSHTFQGNQIVIVTDKRLISVFVEEQGRALKTEMLLSSINKIRAIGTGFQGQGLLLSVSNRDHNELHIHMVGKSIYFSPEQFVGSLLRALDAALKIGSYSTEETFPVYQQTRISLHPLEQSLLHKPTTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG78</accession>
    <name>E3EG78_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Glucose-1-phosphate adenylyltransferase</fullName>
            <ecNumber evidence="9">2.7.7.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ADP-glucose pyrophosphorylase</fullName>
            <shortName evidence="9">ADPGlc PPase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">ADP-glucose synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">glgC</name>
        <name evidence="12" type="synonym">glgC1</name>
        <name evidence="12" type="ORF">PPSC2_10800</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>alpha-D-glucose 1-phosphate + ATP + H(+) = ADP-alpha-D-glucose + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:12120"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57498"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="EC" id="2.7.7.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9 10">Glycan biosynthesis; glycogen biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.27" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370877.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23195"/>
    <dbReference type="EnsemblBacteria" id="ADO56271">
        <property type="protein sequence ID" value="ADO56271"/>
        <property type="gene ID" value="PPSC2_10800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2288"/>
    <dbReference type="eggNOG" id="COG0448">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029499_14_0_9"/>
    <dbReference type="OMA" id="QEWDVDE"/>
    <dbReference type="OrthoDB" id="1557977at2"/>
    <dbReference type="UniPathway" id="UPA00164"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008878">
        <property type="term" value="F:glucose-1-phosphate adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005978">
        <property type="term" value="P:glycogen biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00624">
        <property type="entry name" value="GlgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011831">
        <property type="entry name" value="ADP-Glc_PPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005836">
        <property type="entry name" value="ADP_Glu_pyroP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023049">
        <property type="entry name" value="GlgC_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43523">
        <property type="entry name" value="PTHR43523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02091">
        <property type="entry name" value="glgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00808">
        <property type="entry name" value="ADP_GLC_PYROPHOSPH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00809">
        <property type="entry name" value="ADP_GLC_PYROPHOSPH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="7 9 10" id="KW-0320">Glycogen biosynthesis</keyword>
    <keyword evidence="2 9" id="KW-0321">Glycogen metabolism</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 9 12" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="11">
        <location>
            <begin position="8"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="region of interest" description="Alpha-D-glucose 1-phosphate binding" evidence="9">
        <location>
            <begin position="180"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="site" description="Could play a key role in the communication between the regulatory and the substrate sites" evidence="9">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <feature type="site" description="Could play a key role in the communication between the regulatory and the substrate sites" evidence="9">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO56271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="381" mass="43251" checksum="DF4569C66382D4C7" modified="2011-01-11" version="1">MRKKEVVAMLLAGGQGKRLKGLTRTLAKPAVFFGGTYRIIDFPLSNCSHSGIDTVGVLTQYEPLVLHSYIGVGSDWDLDRLDGGVFVLPPHEKENGNNWYRGTADAIYRNLHFLDQYDPEHVLILSGDHIYKMDYSRMLDYHKEKGADCTISVINVTIQEAQRFGILNADEDLRIYDFEEKPEQPKSTLASMGIYLFKWDVLRHYLLESASDSESSHDFGKDIIPLLLQHGRSLYAYPFAGYWKDVGTIQSLWESNMDLLVQDPPLDLNDPFWRIYTRSPNQPAQYITQRAILKNSIVNEGCMVDGEVRHSVLFYGVEVGEGSVITDSVIMPNVKIGRNVRIHRAIVNENMVIEDNAVIGPEDSLDEIILFDQESQLHARI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB1</accession>
    <name>E3EGB1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nucleoid-associated protein PPSC2_00725</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yaaK</name>
        <name evidence="2" type="ORF">PPSC2_00725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Nucleoid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the YbaB/EbfC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13715"/>
    <dbReference type="EnsemblBacteria" id="ADO54139">
        <property type="protein sequence ID" value="ADO54139"/>
        <property type="gene ID" value="PPSC2_00725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.146"/>
    <dbReference type="eggNOG" id="COG0718">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_140930_1_0_9"/>
    <dbReference type="OMA" id="MGNMMKQ"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043590">
        <property type="term" value="C:bacterial nucleoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1310.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00274">
        <property type="entry name" value="DNA_YbaB_EbfC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036894">
        <property type="entry name" value="YbaB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004401">
        <property type="entry name" value="YbaB/EbfC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33449">
        <property type="entry name" value="PTHR33449"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02575">
        <property type="entry name" value="YbaB_DNA_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004555">
        <property type="entry name" value="UCP004555"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82607">
        <property type="entry name" value="SSF82607"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00103">
        <property type="entry name" value="DNA_YbaB_EbfC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="11080" checksum="C2BD7CEA27024652" modified="2011-01-11" version="1">MNNMNQMMKQVKKMQEQMLKAQEELGGKVIEGSSGGGVVTVEVSGHKKVLSITIKPEAVDPDDVEMLQDLVLTAVNDALSKADELANDDMGKFTGGMKIPGLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGC2</accession>
    <name>E3EGC2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">M1-305</name>
        <name evidence="4" type="ORF">PPSC2_00840</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the acyltransferase 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368794.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13830"/>
    <dbReference type="EnsemblBacteria" id="ADO54150">
        <property type="protein sequence ID" value="ADO54150"/>
        <property type="gene ID" value="PPSC2_00840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.156"/>
    <dbReference type="eggNOG" id="COG1835">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047714_1_0_9"/>
    <dbReference type="OMA" id="IRRYINI"/>
    <dbReference type="OrthoDB" id="1979131at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="128"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="192"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="231"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="272"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="296"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="333"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="3">
        <location>
            <begin position="8"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="44267" checksum="FF2D017A0F354BDA" modified="2011-01-11" version="1">MVKKERIPELDIYRGILIAAVITIHATSMALIDARHSLLFYPFLFLNMFSSFAVPVFIFVSGFVLFYNYVDRPLRGKSMLLFFRKRLMFIVLPYVLFSLMYYLTLVTRGLMPLSDLPLVLLTGKAYTHLYYVIIIIQFYLVFPLLLWGVQRLRHWISSPRRAAFVILAVGLVIQWGFVLLNKYVWQEERGSLAITYISYFALGAAVAIGYEGFKKWLFPVPGTVMGRGQLISWWALWAAWLLLGIVYVQIWFIAYRKAIYADSLVYELLHNAYALVSALVLFQLSVLLYRHTSDRLRMFISWLGACSFGIYLLHPALLRVYRKLDLHGTPIEYVFSVAGGWVLALFGSWLIVTLFFRYVPFSWIGLGTVPKFPSQSKDEQANC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGJ2</accession>
    <name>E3EGJ2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-781</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-781</name>
        <name evidence="1" type="ORF">PPSC2_03295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369268.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54631">
        <property type="protein sequence ID" value="ADO54631"/>
        <property type="gene ID" value="PPSC2_03295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.640"/>
    <dbReference type="HOGENOM" id="CLU_1057053_0_0_9"/>
    <dbReference type="OrthoDB" id="1936263at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="32739" checksum="9FFAF810CF8A47CB" modified="2011-01-11" version="1">MDEKVKYINEMFKYLTQNNDTKEYQTFFALLEKIKYNSSLLEYYGEEFVEYMIDLLLRIEDKYDQASLIETIIECLDIYTFSENYLKEIFDKYMLCVAEKAVNVKGMSACLIGFIQAGISEKEIIKKLEENLEKEHLINVLSKMYINFLANSVEAKSYLMKEVQEAYYLIQRSGIIAQFLLLVHPHVRKYAGISQITFLYDSYRGVYEDCWPRGLLPNMKDTLIRSKVLSSKEVSILEELDRLINMQEKELDSMGVRKLYEDFFEGKDPLEVIFTLPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGQ6</accession>
    <name>E3EGQ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55140.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599528.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18535"/>
    <dbReference type="EnsemblBacteria" id="ADO55140">
        <property type="protein sequence ID" value="ADO55140"/>
        <property type="gene ID" value="PPSC2_05630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1146"/>
    <dbReference type="eggNOG" id="ENOG5031KF0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086602_0_0_9"/>
    <dbReference type="OrthoDB" id="902099at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55140.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="35528" checksum="44A2F804AE09B2D1" modified="2015-05-27" version="2">MYEYKTAPDENMEVEKSLAKQSQHASAGYARVACHRMRQAFKQKLIDIIPALQGRVYDVQPPSQTAEEPYAVMALGEEIWKSSWAGYRQVVRIKLYAGQAGLAQADVWANALIAGLHRASVTGKGEDTSAFTAHYLGVRDAEKLDTVTGKAYRTLRFGVYVPETEGGSATPAPGAAQPEEWLAALVRWTQKQLGESWSVYADAWPAQPGSHAVLWRLSGCETRMAGASMYELRKRFIGHITAPDTTEENRAASALVEGFAAQIQLPLEQDKGRYMSTAEASADLQADAILDGQLRLTLVQRRMRPAEEAALIRRVEIHPILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGY7</accession>
    <name>E3EGY7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Branched-chain amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">azlC</name>
        <name evidence="9" type="ORF">PPSC2_07510</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AzlC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370174.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20480"/>
    <dbReference type="EnsemblBacteria" id="ADO55547">
        <property type="protein sequence ID" value="ADO55547"/>
        <property type="gene ID" value="PPSC2_07510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1552"/>
    <dbReference type="eggNOG" id="COG1296">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065777_3_0_9"/>
    <dbReference type="OMA" id="FIVLFME"/>
    <dbReference type="OrthoDB" id="1866750at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011606">
        <property type="entry name" value="Brnchd-chn_aa_trnsp_permease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34979">
        <property type="entry name" value="PTHR34979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03591">
        <property type="entry name" value="AzlC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="80"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="172"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="202"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="223"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="241" mass="25491" checksum="65CEB193EF1A248D" modified="2011-01-11" version="1">MSIASELSGTKHDSLSFLQGVKDCIPTLLGYVCIGFAAGIVGASSGVSTMEIGLMSALVYAGASQFIMCSMLAAASPPSVIILTTFIVNARHLLLSASLAPYFSKYSLRKNIGIGILLTDESFGVASDKLAKGGQVSDRWMNGLNITAYLAWIASCVAGGVLGNWISQPEAFGLDFALPAMFLALLISQLQSVQTSKLKHRLLLVLCMAVLMYLLSWWVPSHIAVIVATIITATIGVLTDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHG5</accession>
    <name>E3EHG5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">30S ribosomal protein S15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 8" type="primary">rpsO</name>
        <name evidence="8" type="ORF">PPSC2_10125</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="3 6">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the universal ribosomal protein uS15 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56118.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430074.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22595"/>
    <dbReference type="EnsemblBacteria" id="ADO56118">
        <property type="protein sequence ID" value="ADO56118"/>
        <property type="gene ID" value="PPSC2_10125"/>
    </dbReference>
    <dbReference type="GeneID" id="66577890"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2134"/>
    <dbReference type="eggNOG" id="COG0184">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_148518_0_0_9"/>
    <dbReference type="OrthoDB" id="1990141at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00353">
        <property type="entry name" value="Ribosomal_S15p_S13e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01343_B">
        <property type="entry name" value="Ribosomal_S15_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000589">
        <property type="entry name" value="Ribosomal_S15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005290">
        <property type="entry name" value="Ribosomal_S15_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009068">
        <property type="entry name" value="S15_NS1_RNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23321">
        <property type="entry name" value="PTHR23321"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00312">
        <property type="entry name" value="Ribosomal_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01387">
        <property type="entry name" value="Ribosomal_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47060">
        <property type="entry name" value="SSF47060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00952">
        <property type="entry name" value="S15_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00362">
        <property type="entry name" value="RIBOSOMAL_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003920"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56118.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="89" mass="10522" checksum="7267A1A2CD8D8E96" modified="2015-05-27" version="2">MALTQERKQQLIEEYKTHESDTGSPEVQIAILTENIVNLQSHFRSHKKDHHSRRGLLKMVGQRRKLLAYLKKTDVKRYSALIERLGLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHP1</accession>
    <name>E3EHP1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arsR5</name>
        <name evidence="2" type="ORF">PPSC2_10960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370909.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23335"/>
    <dbReference type="EnsemblBacteria" id="ADO56303">
        <property type="protein sequence ID" value="ADO56303"/>
        <property type="gene ID" value="PPSC2_10960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2320"/>
    <dbReference type="eggNOG" id="COG0640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077394_0_0_9"/>
    <dbReference type="OMA" id="ITHDHIF"/>
    <dbReference type="OrthoDB" id="982089at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="225"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="35718" checksum="666B8C0D3D1E039E" modified="2011-01-11" version="1">MSHNVNAPYDVHVAYGPVFELLSSLHTFICRKAYKKTDLSSGWAEQVRGTLSPSLSALLESMEINTDWKVIYGFVCMLSDQGGIEEVVDRLESQTLPELKQQASAYGIPLSDDMENLRKLALQLLSGWNEEYFSHMDTRILSDLKLEAERRKREKNVYSSMEWVDRITNGFRFEPSAGLTQVLLVPQYHFQPMNIIYQFGSLLLCHYSAGVYVQEDDFLSPQEYRMIRSLGEKSRLKILKYLYQSQSPRTFIEIVRHLQLSKGITHDHIFKLRAAGFIHAHFDGETLLGYSARLAAVDEMQGSILGYMERI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHP7</accession>
    <name>E3EHP7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cobalt transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cat</name>
        <name evidence="8" type="ORF">PPSC2_10990</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370915.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2337"/>
    <dbReference type="EnsemblBacteria" id="ADO56309">
        <property type="protein sequence ID" value="ADO56309"/>
        <property type="gene ID" value="PPSC2_10990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2326"/>
    <dbReference type="eggNOG" id="COG0053">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021126_2_0_9"/>
    <dbReference type="OMA" id="HMRTLHL"/>
    <dbReference type="OrthoDB" id="381612at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006829">
        <property type="term" value="P:zinc ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027470">
        <property type="entry name" value="Cation_efflux_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036837">
        <property type="entry name" value="Cation_efflux_CTD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040177">
        <property type="entry name" value="SLC30A9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13414">
        <property type="entry name" value="PTHR13414"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16916">
        <property type="entry name" value="ZT_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160240">
        <property type="entry name" value="SSF160240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01297">
        <property type="entry name" value="CDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="178"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="211"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="domain" description="ZT_dimer" evidence="7">
        <location>
            <begin position="241"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="35677" checksum="D660C471FC3E50C2" modified="2011-01-11" version="1">MEVKQREDSFWSMVKKGNKSSGSAALGNTGIALIKGIAFALTGSGSMFATMMHSIADAVNQMFVFAGSVLAEKKPTKRFPTGFGRVINLFCMVAVIVVTIMAYETVLEGVHLLQHPAESAQGFWINVVVLVLSLVVDGFVWSKAMKEVLHESRVEAKGLGIFTSAFRHVGRAAPPTRLVFYEDLVATTGGVLALLAVVVTSLTDFKLLDGISSILIGCLMVGVAFRVGYDNMVGLIGVSAPPDIEERVASIILADTHVTDISQMRILQEGRYYHVEGVIELTSGMTLADADDIKFRVEDALLRDPNISDAALGILEDDGIRNWKQEKPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHS0</accession>
    <name>E3EHS0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">marR9</name>
        <name evidence="2" type="ORF">PPSC2_11085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370938.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2360"/>
    <dbReference type="EnsemblBacteria" id="ADO56332">
        <property type="protein sequence ID" value="ADO56332"/>
        <property type="gene ID" value="PPSC2_11085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2349"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_18_7_9"/>
    <dbReference type="OMA" id="GRQMCRD"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="14"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="155" mass="17484" checksum="6CFE61F6F662EDD9" modified="2011-01-11" version="1">MGSEVYPVCLPWEEESTMYLIKWIFTTVRREIETALRPLGLTSPQSQTLYILAMSPGVTNTELEKLLLIDKSSVTSLVNGIVKKNWAVRQSHPEDARMKQIYLTEEGLEIHKVAERTIEQIKSSVGKTLSVGESEALRGLLKKILHDYRPANACV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI03</accession>
    <name>E3EI03_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ChvB3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">chvB3</name>
        <name evidence="3" type="ORF">PPSC2_11860</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24185"/>
    <dbReference type="CAZy" id="GH94">
        <property type="family name" value="Glycoside Hydrolase Family 94"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56495">
        <property type="protein sequence ID" value="ADO56495"/>
        <property type="gene ID" value="PPSC2_11860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2511"/>
    <dbReference type="eggNOG" id="COG3459">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019054_0_0_9"/>
    <dbReference type="OMA" id="YVYAQMI"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033432">
        <property type="entry name" value="GH36_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17167">
        <property type="entry name" value="Glyco_hydro_36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_hydro_36" evidence="2">
        <location>
            <begin position="43"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="547" mass="61440" checksum="02BF609F9AECA880" modified="2011-01-11" version="1">MENPEEEKWESPGIINKKRAHAMIAQFADETDVERALSELRSYWNDLLSKYTLQSHDDKLNRMVNIWNPYQCMVTFNLSRSASYFESGIGRGMGFRDSNQDLLGFVHQIPERARERIIDIASTQFENGGAYHQYQPLTKKGNHEVGGGFNDDPLWLIVGTSAYIKETGDFGILDEQVPFDGNVDRASSLFEHLKRSFYHVVDNLGPHGLPLIGRADWNDCLNLNCFSATPDESYQTTQNLEGRIAESVFIAGLFVYTGPDFIELCKRRGLNEEAATAQAHVDRMRTATLEHGFDGEWFLRAYDHYGNKIGSKDCEEGQIFIEPQGFCVMAGIGVEEGLAHKALDSTRDRLETPYGIVLQHPPYSRYYMNLGEISSYPPGYKENAGIFCHNNPWIMMAEAVIGRGDRAFELYSKIAPAYLEDISDIHRTEPYVYAQMIAGKDAVREGEAKNSWLTGTAAWNFIAITQSILGIQPEWDGLRIDPCIPKSWGEFTVTRVFRGDTYVIHITNPQHVSKGVATVTVDGTVLTNNILPVAGDGTIHQVKVLLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI51</accession>
    <name>E3EI51_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-871</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-871</name>
        <name evidence="1" type="ORF">PPSC2_03705</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369355.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54719">
        <property type="protein sequence ID" value="ADO54719"/>
        <property type="gene ID" value="PPSC2_03705"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03705"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.729"/>
    <dbReference type="HOGENOM" id="CLU_969258_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="287" mass="31861" checksum="6E26B12EB48A188E" modified="2011-01-11" version="1">MRLNNASLPVAFNRISKQGNSINNSTVQQLNQQIASRMQQNAQAEKSERTEKMLDLKQMNNKSALDDGLTQSALIDRGLGVVQGIYTALHQSLKNSVDPWLDELDKIDQSNASLEYKEQAKSEIKEHLQEMTDTITGLYGGFLKGTAKMYNKATDGAFQEVIQPKDSTTQQTGFNLLDVSPQTLGLDHITESDDIRSLFANVLAKLESYGSTLSQVRSEFQKANNLDQHILEAVTSKVKSKELDAMDNVVSYKGLVDRKSFDQLFAQTIKLSKSSVSIHTQGIDITI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ44</accession>
    <name>E3EJ44_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cell division protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gpsB</name>
        <name evidence="7" type="ORF">PPSC2_10600</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370831.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22995"/>
    <dbReference type="EnsemblBacteria" id="ADO56225">
        <property type="protein sequence ID" value="ADO56225"/>
        <property type="gene ID" value="PPSC2_10600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2240"/>
    <dbReference type="eggNOG" id="COG3599">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1968384_0_0_9"/>
    <dbReference type="OMA" id="DLMDKWQ"/>
    <dbReference type="OrthoDB" id="1673442at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019933">
        <property type="entry name" value="DivIVA_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007793">
        <property type="entry name" value="DivIVA_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35794">
        <property type="entry name" value="PTHR35794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05103">
        <property type="entry name" value="DivIVA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03544">
        <property type="entry name" value="DivI1A_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 7" id="KW-0132">Cell division</keyword>
    <keyword evidence="4 6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="63"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="125" mass="15088" checksum="E9E0582ED7B0917C" modified="2011-01-11" version="1">MDEHMKRRLDKQKQLFKQLGIQLDALSIHEKQFKNKMRGYDPDEVDAFLDEVIKDYERFYANIADLMDKWQEQQATIRDLKNAPKPAADFNALDRRQLEDIIKQLEYSVRQLKVRVRPENDYFPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJA0</accession>
    <name>E3EJA0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Macrolide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_11360</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370992.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23720"/>
    <dbReference type="EnsemblBacteria" id="ADO56387">
        <property type="protein sequence ID" value="ADO56387"/>
        <property type="gene ID" value="PPSC2_11360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2403"/>
    <dbReference type="eggNOG" id="COG1136">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="LIHEPKM"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="5"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="41"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="26651" checksum="35A762F49240AA1B" modified="2011-01-11" version="1">MRYVIQIEGLKKVYHVGDQEIHALREVQLDIADGDFVAIMGPSGSGKSTMMNVIGCLDLPTSGQFYLDGYSILDAREDELAIIRNQKIGFVFQKFHLLPRSTALENVELPMIYAGVSAKERRLRAMDALTSVGLGDRMNNRPNELSGGQQQRVSIARALVNNPVILLADEPTGALDSKTSVEIMGIFQRLNDQGKTVVLVTHDQEVAEYAKRLIHFRDGRIEKDQPVEERRMAAEEVKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJD4</accession>
    <name>E3EJD4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA uridine(34) hydroxylase</fullName>
            <ecNumber evidence="1">1.14.-.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">tRNA hydroxylation protein O</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ybfQ</name>
        <name evidence="1" type="synonym">trhO</name>
        <name evidence="3" type="ORF">PPSC2_11520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U) modification at position 34 in tRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AH2 + O2 + uridine(34) in tRNA = 5-hydroxyuridine(34) in tRNA + A + H2O</text>
            <dbReference type="Rhea" id="RHEA:64224"/>
            <dbReference type="Rhea" id="RHEA-COMP:11727"/>
            <dbReference type="Rhea" id="RHEA-COMP:13381"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:136877"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TrhO family.</text>
    </comment>
    <dbReference type="EC" id="1.14.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371026.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23885"/>
    <dbReference type="EnsemblBacteria" id="ADO56421">
        <property type="protein sequence ID" value="ADO56421"/>
        <property type="gene ID" value="PPSC2_11520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2436"/>
    <dbReference type="eggNOG" id="COG1054">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038878_0_0_9"/>
    <dbReference type="OMA" id="CDTHTNC"/>
    <dbReference type="OrthoDB" id="684577at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00469">
        <property type="entry name" value="TrhO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022111">
        <property type="entry name" value="Rhodanese_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020936">
        <property type="entry name" value="TrhO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040503">
        <property type="entry name" value="TRHO_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43268">
        <property type="entry name" value="PTHR43268"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12368">
        <property type="entry name" value="Rhodanese_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17773">
        <property type="entry name" value="UPF0176_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="126"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="297" mass="34271" checksum="551CC9A1F366577E" modified="2011-01-11" version="1">MCEHAYRILLFYKYVNIEDPATFTAEHLAYCKELGVKGRILIAEEGINGTLSGTVEQTEQYIRDLRANPKFHDIVIKIDESDGHAFKKIFVRHRQELVTLRHEDELDPNVISGKRLSPKEFYEQLQDEDVVVLDGRNDYEYDIGHFRGAIRPEVESFREFPQWIRDNMTGFKDKKILTYCTGGIRCEKLSGLLIKEGFNDVAQLDGGIVTYSKDPEVQGRLFDGKCYVFDERISVRINHTDEDVVVGNCYHCETTNDHYINCPVCNLQHIVCPDCEEQHQHYCSDDCRTKAETMASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJM3</accession>
    <name>E3EJM3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371177.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2603"/>
    <dbReference type="EnsemblBacteria" id="ADO56573">
        <property type="protein sequence ID" value="ADO56573"/>
        <property type="gene ID" value="PPSC2_12235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2588"/>
    <dbReference type="eggNOG" id="ENOG503069E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2168490_0_0_9"/>
    <dbReference type="OrthoDB" id="2052817at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="12669" checksum="341B668B955C5284" modified="2011-01-11" version="1">MNEILTIAGLILLVLAVLFSVKKIYDFIDMQKVIQRDTYENYDIYRAAQKFAFGTPVDEIREILTNSYELDDKQIEETMLLALPHRTDTDGGYLAFIKAVNRVLGQDIYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJS1</accession>
    <name>E3EJS1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_26765</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="7 8">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
            <plasmid evidence="7 8">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the transposase 35 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386083.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0278"/>
    <dbReference type="EnsemblBacteria" id="ADO59669">
        <property type="protein sequence ID" value="ADO59669"/>
        <property type="gene ID" value="PPSC2_26765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5658"/>
    <dbReference type="eggNOG" id="COG0675">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032903_16_5_9"/>
    <dbReference type="OMA" id="RERIKYG"/>
    <dbReference type="OrthoDB" id="222391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001959">
        <property type="entry name" value="Transposase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010095">
        <property type="entry name" value="Transposase_IS605_OrfB_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01385">
        <property type="entry name" value="OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07282">
        <property type="entry name" value="OrfB_Zn_ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01766">
        <property type="entry name" value="tspaseT_teng_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0614">Plasmid</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="OrfB_IS605" evidence="5">
        <location>
            <begin position="173"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_Zn_ribbon" evidence="6">
        <location>
            <begin position="310"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="391" mass="44544" checksum="FB5A877BF722C5B3" modified="2011-01-11" version="1">MYRGKKILFTASKEVIQQLFACNRISATIWNACLDAAKQHHLTTGKWINQTQLQQAVKGKFPLHSQSVQAVCHKYLFSRDSMHQAKKKGIATARYPHRKKKHFNTKWVDKAFIIHPNGKIELSLGIQNGKRVKPLVLFAKNLPDGDIKEIELCFDRKLYLSVTYDDGQVAKSASGAYGAGVDMGEVQAIASVCENGEGILLSGRKLRSIHRLRNKKIAQLQRLMSKCKKGSHQWKKYNRAKQYVLSKSERQLQDGSHKITKAFVNWCVAQSIQEVFVGDVGSVSQGTKKKRKLRRKQRQKVSNWNVGQQMQYLTYKCQAQGIAVAKVSEAYSTQTCPVCQKRHKPTGRMYRCRCGYVSHRDTHGAKNILSEQRYGIFTPIEEKNLTYLRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK33</accession>
    <name>E3EK33_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386156.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0351"/>
    <dbReference type="EnsemblBacteria" id="ADO59742">
        <property type="protein sequence ID" value="ADO59742"/>
        <property type="gene ID" value="PPSC2_26470"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26470"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5580"/>
    <dbReference type="HOGENOM" id="CLU_1883723_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="135" mass="16197" checksum="590CC83CA88F9ABB" modified="2011-01-11" version="1">MVFRLMFHIILISLGFSVITMFFGFFAGWSYLEVFLYIFTNILVFFLYLEIVIHDLSIAKQNRELDPKKEWLSFEKYLYREVYTVSDILVMLFYLPIWIVELIAYASYFVIKTAFKQLKKCGNMVVYAKKSKNKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK41</accession>
    <name>E3EK41_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386164.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59750">
        <property type="protein sequence ID" value="ADO59750"/>
        <property type="gene ID" value="PPSC2_26430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5572"/>
    <dbReference type="HOGENOM" id="CLU_2617273_0_0_9"/>
    <dbReference type="OrthoDB" id="2071810at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="3"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="84" mass="9665" checksum="5F4A6F53DF5A4011" modified="2011-01-11" version="1">MKVKRLKEILESLDEKLENVDDDLEVFIRNSVNPCGNIQELEQVEFSTYGFFGKAIPCLILNTDSSKTLETNKEDEVIYYISSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKC4</accession>
    <name>E3EKC4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nudix hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59451.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886267.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0057"/>
    <dbReference type="EnsemblBacteria" id="ADO59451">
        <property type="protein sequence ID" value="ADO59451"/>
        <property type="gene ID" value="PPSC2_27805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5893"/>
    <dbReference type="eggNOG" id="COG4112">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1203874_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="84"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59451.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="26633" checksum="7D470B3AEE842694" modified="2015-05-27" version="2">MTNETLEYILNRRDEYEIDTHEWTSWNELKAEWLEYRKPSNKESIIYFKEMDLLDIPAGFSEVATLPLLAFQVGKRSLLEYDPAHRHPIPYVIVKHGSKYFFILRETGSGELRLIGKKGMLGGHVGAEDIDSSGLNQTILNGLMRELNEEAAIDETMIQSIQLKGLIKGDEGVDCDHLGIVYRIDLNTDQIETQEDGVQKGIWIHEDELERHFDLFESWSKITFTYLLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKD6</accession>
    <name>E3EKD6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AAA_31 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385877.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0069"/>
    <dbReference type="EnsemblBacteria" id="ADO59463">
        <property type="protein sequence ID" value="ADO59463"/>
        <property type="gene ID" value="PPSC2_27750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5880"/>
    <dbReference type="HOGENOM" id="CLU_1123366_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="4"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="250" mass="28067" checksum="BC11EF7709541D68" modified="2011-01-11" version="1">MSGKVYAIMSVVQGNGAKYVATNLAKSLRRNGKKEMFKKVLLIDFDFDNPCLAYEFVKEDDTHGIDNLLAHLNSSGLNETVFSENVIRTTLDVDVLRGTRFIGKVKRFSSFEIESILEVARKLYEVVIVVISPKANNAGTVYTLFEADQVILVLRNNHANLLKVDGVLRVVNQYHKSEHPTLVIYNMKNMASKVDVNDKLKNSLLDLKVVGVLEYDEQSTDNLDLQKKESIFAAKPINTKIFAEIGQQLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKJ0</accession>
    <name>E3EKJ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_26070</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386236.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0432"/>
    <dbReference type="EnsemblBacteria" id="ADO59822">
        <property type="protein sequence ID" value="ADO59822"/>
        <property type="gene ID" value="PPSC2_26070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5485"/>
    <dbReference type="eggNOG" id="ENOG503070G">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106688_0_0_9"/>
    <dbReference type="OrthoDB" id="1905833at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168983" evidence="2">
        <location>
            <begin position="28"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="137"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="17641" checksum="03DD2F1E30643D2E" modified="2011-01-11" version="1">MLKLNKKAVFLTGVFALISVALLTASVEPSKRIEVSKDGGDIAVQQTGQEVRELLGGTSPTMSLIVEKGYGHVKIKVRNEGTSNLTWSLQGNGREYLIKTVGKGKTLTWTSLNSFPNGMPSGDYIIQFRAGGNKVEGEAWGTTGKRPSDIKNRTTSKERLGDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKK8</accession>
    <name>E3EKK8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386254.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0451"/>
    <dbReference type="EnsemblBacteria" id="ADO59840">
        <property type="protein sequence ID" value="ADO59840"/>
        <property type="gene ID" value="PPSC2_25970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5462"/>
    <dbReference type="HOGENOM" id="CLU_2233877_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="12244" checksum="780AE1695541E574" modified="2011-01-11" version="1">MEYTLTQKQKKLIDEIVNDPMGGKNWFINCHKQGPYLWDDEILHDIPIEAIYDYFREEMTVEEKLQVAYDQFGIYVTDTYIGREKDFQAGMRAACKILGVSIGKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKM8</accession>
    <name>E3EKM8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386274.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59860">
        <property type="protein sequence ID" value="ADO59860"/>
        <property type="gene ID" value="PPSC2_25890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5439"/>
    <dbReference type="HOGENOM" id="CLU_976071_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="33865" checksum="0B126F674337D0A0" modified="2011-01-11" version="1">MKTVEQHDEGNLKGITLNMILTKVFNWAYENDPVLYKNLDLHFKAQHCRSALSEDEMREVFLLKLVSKDDVLKLLTKAITLSDFHHTNKFSWVFGNSLSYKEAGSEEWKDSYRDVISQIQTHFDLLRDRGFDSWHKSTDLKKHNHFRFWMNKFLRDDQLYFLRFFVQHTGNLQSFDTLYVGTNESESYHAIIQYILDQNICPDPHHKELQVPDFVNPDIYNPRSIQSSGRFGGFHYLVYLTAAELQEIYETSLLNEQFNYMEKSMWSYINASSTDKETRFFLFLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKS2</accession>
    <name>E3EKS2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27480</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385937.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0129"/>
    <dbReference type="EnsemblBacteria" id="ADO59523">
        <property type="protein sequence ID" value="ADO59523"/>
        <property type="gene ID" value="PPSC2_27480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5816"/>
    <dbReference type="HOGENOM" id="CLU_1609214_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="19285" checksum="BE39CC0CF5E9A800" modified="2011-01-11" version="1">MLGTMYRPTKISKLLKKRGYEFQLKYKSNFLGMYEFKVEIYLNYDVSTGKEQIVVDVQDITIPLVISNDLYALISEDEAHSKVEQRKISSFRVMRRPALNQVRSANDQLRIQMNVHSGNYPEEGETFSIKLKPVIIENREYMWLITDAVTQVSIITNTTLKLREQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3ELC5</accession>
    <name>E3ELC5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386371.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59957">
        <property type="protein sequence ID" value="ADO59957"/>
        <property type="gene ID" value="PPSC2_28395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6023"/>
    <dbReference type="HOGENOM" id="CLU_1601083_0_0_9"/>
    <dbReference type="OrthoDB" id="1820912at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="19317" checksum="DCFC89752D73E8A7" modified="2011-01-11" version="1">MLKELMDSYLNSLKDFNEKRNHAQVVIDKEQGRLEKLQKKIDKMKHNLYEMPHPNWFDSIFNPLAEALSQKLNKKYDFYGPFGLRNETTIYFMENLNISICNQDTWSITLYPGGLGDGIIYYQTGETKDGKDRNHVTDPNGFNMLIAPLPDSIEEIEKLLVHSKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBV0</accession>
    <name>A0A0D5ZBV0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016820733.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44255">
        <property type="protein sequence ID" value="AKA44255"/>
        <property type="gene ID" value="PPSC2_13380"/>
    </dbReference>
    <dbReference type="GeneID" id="66577304"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13380"/>
    <dbReference type="HOGENOM" id="CLU_189668_0_0_9"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="71" mass="8330" checksum="9B6806EADE28F8E2" modified="2015-05-27" version="1">MQKLTRGKCLLKEELKSHGRTQSWLARRTGYSRQQISNWIAGRDKMSFEAAVLISRILECKAEDLYEWELA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBZ6</accession>
    <name>A0A0D5ZBZ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Signal peptide protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324641.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05960"/>
    <dbReference type="EnsemblBacteria" id="AKA44300">
        <property type="protein sequence ID" value="AKA44300"/>
        <property type="gene ID" value="PPSC2_18745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4017"/>
    <dbReference type="eggNOG" id="COG1716">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094173_0_0_9"/>
    <dbReference type="OrthoDB" id="1989726at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00060">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00498">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SSF49879"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FHA" evidence="1">
        <location>
            <begin position="87"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="175" mass="19442" checksum="A52FC559565B6CE0" modified="2015-05-27" version="1">MSLTRCPNGHMFSTRKHGNTCPYCNTVVNIAAPKNAEPAAKTNVAGDNDKTMPYLGETVGIHPVTGWLVCIEGAQVGQDYRIMAEKNFIGRAEEMHVRIIGDNTISRKNHAVIVYDPKKRNFYLLPGDSSGLAYHNNEAVYSPVELAAYDVIQLGRSKFIFIPLCGAHFEWDNEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC48</accession>
    <name>A0A0D5ZC48_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08755</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44218">
        <property type="protein sequence ID" value="AKA44218"/>
        <property type="gene ID" value="PPSC2_08755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08755"/>
    <dbReference type="HOGENOM" id="CLU_2082529_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="117" mass="13511" checksum="5B607051EC657D69" modified="2015-05-27" version="1">MACYSPYRTACFLDCRKWDVFSIHFRKCIHKTIKKYIKKLVELYVQVCDESGNRNESKKSDLNILGTLNQDVWEDRLAAVAAGAGAGGYDNIVEAARHMARVRDESFKHIPRERCRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCI2</accession>
    <name>A0A0D5ZCI2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44252">
        <property type="protein sequence ID" value="AKA44252"/>
        <property type="gene ID" value="PPSC2_12915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2752"/>
    <dbReference type="HOGENOM" id="CLU_177756_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="8639" checksum="A828091BA7FCBC2B" modified="2015-05-27" version="1">MIDMNSRGILYGIAADLPAMREHKSGHIINLSSIAGHNVYPDSTVYCAIRHAVKADEYEIYGGVGEKNSYDLILHSCGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCI7</accession>
    <name>A0A0D5ZCI7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17685</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324600.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44294">
        <property type="protein sequence ID" value="AKA44294"/>
        <property type="gene ID" value="PPSC2_17685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3781"/>
    <dbReference type="HOGENOM" id="CLU_124378_0_0_9"/>
    <dbReference type="OrthoDB" id="2034050at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="16536" checksum="6D9BB90DB467EA5D" modified="2015-05-27" version="1">MDEIYFLRHYLSSLRYRCSKAILNAPSNYPNYELGNGVRTPIEILAHMSDVIRYAQSVFDNQVQLKKESGNWNDEVQTFFNELHNLDNLMKSNGIPNKDRIIEKLIQGPLSDAMTHVGQLSMIRRMAGDSIPGENFFIAEVKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCJ1</accession>
    <name>A0A0D5ZCJ1_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PPSC2_26000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886226.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44338">
        <property type="protein sequence ID" value="AKA44338"/>
        <property type="gene ID" value="PPSC2_26000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5468"/>
    <dbReference type="HOGENOM" id="CLU_1029916_0_0_9"/>
    <dbReference type="OrthoDB" id="2095345at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="270" mass="31724" checksum="0EEF55F66A32F075" modified="2015-05-27" version="1">MPPRTSSKWRHPGAFNFLVKRSRFKKTAGTAGIAWYTMFRWDRSHFSLKVIDTLFLSLEGMTQESHHFSDGRFNPGVIFRTQRVSIIPLFPLFPYTYKLKPDFIKLGEIYGIDGVTVKRWELLYEGSIIDGVRHFNINYDREFHFARQRMLDLSILFLGIINFVIHYKEEVGVISKKTQTNTNHKKKNKKTSKNVAYVPSRIYSVNVVPDEPKIRKSSERHTEAWDVRGHIRQYKNGKVVWIKPYVKGNKDKVQPKEYKVTNIKDQPVSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCL2</accession>
    <name>A0A0D5ZCL2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_24055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886069.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44324">
        <property type="protein sequence ID" value="AKA44324"/>
        <property type="gene ID" value="PPSC2_24055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5091"/>
    <dbReference type="HOGENOM" id="CLU_1592949_0_0_9"/>
    <dbReference type="OrthoDB" id="1606669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009380">
        <property type="entry name" value="DUF1036"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06282">
        <property type="entry name" value="DUF1036"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18489" checksum="BA7850402F107805" modified="2015-05-27" version="1">MGFYVRNSTSNPISVAVGYYDSGCSPITYAKRGWYRIEPGRRAFLVAGSAANQTFYVYGHDSFGNWWGGDFYTDVPREAFTRCWIAGCQGQGCRNVGFDEINVGNFENYTLNLVDSTQGASKSRRTLVAKKRKTNFKLGKFSFIKSPGKVGKLGKTRKPLYGKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCL3</accession>
    <name>A0A0D5ZCL3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flagellar protein FlaG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_22985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886061.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4898"/>
    <dbReference type="EnsemblBacteria" id="AKA44321">
        <property type="protein sequence ID" value="AKA44321"/>
        <property type="gene ID" value="PPSC2_22985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4867"/>
    <dbReference type="eggNOG" id="COG1334">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120910_3_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005186">
        <property type="entry name" value="FlaG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035924">
        <property type="entry name" value="FlaG-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37166">
        <property type="entry name" value="PTHR37166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03646">
        <property type="entry name" value="FlaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160214">
        <property type="entry name" value="SSF160214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="13991" checksum="FA389CAC97E72D56" modified="2015-05-27" version="1">MNLQFSLSTNVASSTSSTRSQLSDSDVTQSSMLLRAAKTGIDLSRLEQQGVSISLGEEQLIKAIDRAVKALQGPSTTLEVSVHEKTHQIMVKVLNKESGELIREIPPEKTLDLVAKMMEIAGILVDQKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCM9</accession>
    <name>A0A0D5ZCM9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44368">
        <property type="protein sequence ID" value="AKA44368"/>
        <property type="gene ID" value="PPSC2_26885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5683"/>
    <dbReference type="HOGENOM" id="CLU_2772067_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="69" mass="8226" checksum="83DC7169BFB2A7A1" modified="2015-05-27" version="1">MHKHSLLFIAKTFIDLDSLLQYLFSYLLLLICDSNSIMKTILILLLFAHKSFYYNYKGTKNKMLYVLEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCT8</accession>
    <name>A0A0D5ZCT8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886221.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44342">
        <property type="protein sequence ID" value="AKA44342"/>
        <property type="gene ID" value="PPSC2_26050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5480"/>
    <dbReference type="HOGENOM" id="CLU_2357108_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="11255" checksum="16CC5547AB8AC5EE" modified="2015-05-27" version="1">MRNVTKLLSFYDLITLHNLKLPTSLSDARKVQKESCYPSSFWGAFDFTDSDERKLREHLSTIYVGKITDTFISNFALRFLRISQKNSIFERGTNKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCW6</accession>
    <name>A0A0D5ZCW6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28385</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44396">
        <property type="protein sequence ID" value="AKA44396"/>
        <property type="gene ID" value="PPSC2_28385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6020"/>
    <dbReference type="HOGENOM" id="CLU_2539434_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="8776" checksum="A36C176C9849B57E" modified="2015-05-27" version="1">MRHSAHCVAPQNPLKASLTFSGDFTNGYVFYVVIGKVFEIKGGATLSQNNELPHGAHYITVKTAKPTVGLEALAVGFALSSAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4V7</accession>
    <name>E3E4V7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transcription attenuation protein MtrB</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Trp RNA-binding attenuation protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Tryptophan RNA-binding attenuator protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">mtrB</name>
        <name evidence="10" type="ORF">PPSC2_14640</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Oligomer of 11 identical subunits arranged in doughnut-like structure.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the MtrB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371682.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02290"/>
    <dbReference type="EnsemblBacteria" id="ADO57085">
        <property type="protein sequence ID" value="ADO57085"/>
        <property type="gene ID" value="PPSC2_14640"/>
    </dbReference>
    <dbReference type="GeneID" id="66577052"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3123"/>
    <dbReference type="eggNOG" id="ENOG5032Z9Y">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_180875_0_0_9"/>
    <dbReference type="OMA" id="KDTKFHH"/>
    <dbReference type="OrthoDB" id="1974796at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000824">
        <property type="entry name" value="MtrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016031">
        <property type="entry name" value="Trp_RNA-bd_attenuator-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023558">
        <property type="entry name" value="Trp_RNA-bd_attenuator_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02081">
        <property type="entry name" value="TrpBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00687">
        <property type="entry name" value="TRPRNAAP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51219">
        <property type="entry name" value="SSF51219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TrpBP" evidence="9">
        <location>
            <begin position="8"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029615"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="76" mass="8389" checksum="00EA9A6D03C57D2B" modified="2011-01-11" version="1">MEDNVTGSSEYVVIKAKSNGCQVFGLTRGQDTRLHHSEKLDKGEVMIVQFTDHTSAIKIRGKAVVMTKHGVVDTEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X4</accession>
    <name>E3E4X4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 9">GTPase Der</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">GTP-binding protein EngA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">der</name>
        <name evidence="11" type="synonym">engA2</name>
        <name evidence="11" type="ORF">PPSC2_14710</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 9">GTPase that plays an essential role in the late steps of ribosome biogenesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Associates with the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8 9">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371698.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02345"/>
    <dbReference type="EnsemblBacteria" id="ADO57102">
        <property type="protein sequence ID" value="ADO57102"/>
        <property type="gene ID" value="PPSC2_14710"/>
    </dbReference>
    <dbReference type="GeneID" id="66577041"/>
    <dbReference type="KEGG" id="ppm:PPSC2_14710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3139"/>
    <dbReference type="eggNOG" id="COG1160">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016077_6_2_9"/>
    <dbReference type="OMA" id="KFRFLEY"/>
    <dbReference type="OrthoDB" id="263682at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042254">
        <property type="term" value="P:ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00195">
        <property type="entry name" value="GTPase_Der"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031166">
        <property type="entry name" value="G_ENGA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016484">
        <property type="entry name" value="GTP-bd_EngA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032859">
        <property type="entry name" value="KH_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14714">
        <property type="entry name" value="KH_dom-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006485">
        <property type="entry name" value="GTP-binding_EngA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03594">
        <property type="entry name" value="GTPase_EngA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51712">
        <property type="entry name" value="G_ENGA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5 7 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 7" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="EngA-type G" evidence="10">
        <location>
            <begin position="4"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="EngA-type G" evidence="10">
        <location>
            <begin position="177"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="10"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="57"/>
            <end position="61"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="120"/>
            <end position="123"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="183"/>
            <end position="190"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="230"/>
            <end position="234"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="295"/>
            <end position="298"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="440" mass="49260" checksum="00E3D8D80DB35D8A" modified="2011-01-11" version="1">MARPVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGIEIDGEDVILKSIRMQAELAIEEADVIVFMSDAKAGITQADEEVAQMLYRSGKPIIVAVNKVDNLSRADLIYEFYSYGFGDPIAVSGSHGTGIGDLLDAITSNLPELEEDHYDEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGMRKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEGIIEQDKHIAGYAYEAGKASLFVVNKWDVVDKDDKTMHQFETKIRDHFLFMTYAPIVFLSAKTKQRLQKLLPVVQHVAQQHVMRIQTHLLNDVISDAVAINPPPTDKGRRLRINYVTQVAVKPPTMVVFVNDPEIMHFSYERYLENKIRAAFNFEGTPIRIFTRRKSDES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X9</accession>
    <name>E3E4X9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Biotin carboxylase</fullName>
            <ecNumber evidence="5">6.3.4.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Acetyl-coenzyme A carboxylase biotin carboxylase subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">accC</name>
        <name evidence="8" type="ORF">PPSC2_15105</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + hydrogencarbonate + N(6)-biotinyl-L-lysyl-[protein] = ADP + H(+) + N(6)-carboxybiotinyl-L-lysyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13501"/>
            <dbReference type="Rhea" id="RHEA-COMP:10505"/>
            <dbReference type="Rhea" id="RHEA-COMP:10506"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83144"/>
            <dbReference type="ChEBI" id="CHEBI:83145"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.14"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Lipid metabolism; malonyl-CoA biosynthesis; malonyl-CoA from acetyl-CoA: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.14" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371779.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02725"/>
    <dbReference type="EnsemblBacteria" id="ADO57187">
        <property type="protein sequence ID" value="ADO57187"/>
        <property type="gene ID" value="PPSC2_15105"/>
    </dbReference>
    <dbReference type="GeneID" id="66576963"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3224"/>
    <dbReference type="eggNOG" id="COG0439">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000395_3_2_9"/>
    <dbReference type="OMA" id="FVEICSH"/>
    <dbReference type="OrthoDB" id="361205at2"/>
    <dbReference type="UniPathway" id="UPA00655">
        <property type="reaction ID" value="UER00711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004075">
        <property type="term" value="F:biotin carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001295">
        <property type="term" value="P:malonyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004549">
        <property type="entry name" value="Acetyl_CoA_COase_biotin_COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005482">
        <property type="entry name" value="Biotin_COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02785">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00878">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00514">
        <property type="entry name" value="accC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00866">
        <property type="entry name" value="CPSASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0092">Biotin</keyword>
    <keyword evidence="5" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="1 5 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="2 4 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="7">
        <location>
            <begin position="2"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="6">
        <location>
            <begin position="121"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="447" mass="49060" checksum="4751D487F714781E" modified="2011-01-11" version="1">MTFQKVLIANRGEIAVRIIRACREMNISTVAVYSEADKDSLHVRLADEAYCIGPTLSKDSYLNFTNLMSVATLTECDAIHPGYGFLAENADFAEICESCNITFIGPSPEAINKMGDKAVAKQTMKDAGVPVIPGSDGLVEDVQDAISIARDIGYPVIIKATAGGGGKGIRIAEDEDNLIQQITTAQQEAQKAFGNAGVYLEKYLTGMKHVEIQIIADKHGNVAYLGERDCSVQRRRQKLLEEAPCPVLSQDVREEMGQAAVRAALAVQYSGAGTLEFLLGPDNKFYFMEMNTRIQVEHPVTEMITGVDLIKEMISVAEGHPLSFTQEEVTINGWAIECRINAEDPDRNFMPAPGKIGFYLPPGGPGVRVDSAAYPGYSIPPYYDSMIAKLIVWAPTRQEAIAKMKRALAEFAIEGIPTTISFHQRLLEHPTFIEGDFDIKFLEENEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3E543</accession>
    <name>E3E543_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Small ribosomal subunit biogenesis GTPase RsgA</fullName>
            <ecNumber evidence="7">3.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yloQ3</name>
        <name evidence="7" type="synonym">rsgA</name>
        <name evidence="10" type="ORF">PPSC2_15410</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371841.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03060"/>
    <dbReference type="EnsemblBacteria" id="ADO57251">
        <property type="protein sequence ID" value="ADO57251"/>
        <property type="gene ID" value="PPSC2_15410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3293"/>
    <dbReference type="eggNOG" id="COG1162">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_033617_2_1_9"/>
    <dbReference type="OMA" id="CLVAAYD"/>
    <dbReference type="OrthoDB" id="908180at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04466">
        <property type="entry name" value="S1_YloQ_GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01854">
        <property type="entry name" value="YjeQ_EngC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01820">
        <property type="entry name" value="GTPase_RsgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030378">
        <property type="entry name" value="G_CP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004881">
        <property type="entry name" value="Ribosome_biogen_GTPase_RsgA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010914">
        <property type="entry name" value="RsgA_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031944">
        <property type="entry name" value="RsgA_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32120">
        <property type="entry name" value="PTHR32120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03193">
        <property type="entry name" value="RsgA_GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16745">
        <property type="entry name" value="RsgA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00157">
        <property type="entry name" value="TIGR00157"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50936">
        <property type="entry name" value="ENGC_GTPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51721">
        <property type="entry name" value="G_CP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="7" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CP-type G" evidence="9">
        <location>
            <begin position="72"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="ENGC_GTPASE" evidence="8">
        <location>
            <begin position="81"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="121"/>
            <end position="124"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="177"/>
            <end position="185"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="259"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="272"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="305" mass="34078" checksum="B6DC3CF030B65E64" modified="2011-01-11" version="1">MPEGLIVKALSGYYYVSSLDQDGRPVSGEATVQCRARGLFKKKEITPLVGDRVVYELTENGEGMVKEIRKRTTELIRPPVANTTLAVLLFSLREPDLNLPLLDKFLVHIEHAGLDTIICLTKRDLYEGSPSEDDTVLKVQEMYRKIGYEVLVTSTRTGEGTAELKKLLAGQISVFSGQSGVGKSSMLNALEPGLTLETSAISNKLGRGRHTTRHVELIPLDNGGFVADTPGFSQLDFLELGVDELSPCFREFQQYAEGCKFRGCTHIHEPGCKVREALEEGHISQGRYDSYLQFYQELKEKKRRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5K5</accession>
    <name>E3E5K5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ADP-ribose pyrophosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rppH3</name>
        <name evidence="4" type="ORF">PPSC2_17625</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the Nudix hydrolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57724.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324597.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57724">
        <property type="protein sequence ID" value="ADO57724"/>
        <property type="gene ID" value="PPSC2_17625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3767"/>
    <dbReference type="eggNOG" id="COG1051">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037162_7_0_9"/>
    <dbReference type="OrthoDB" id="1308416at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
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    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="3">
        <location>
            <begin position="15"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57724.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="17164" checksum="902AB90468E9D040" modified="2015-05-27" version="2">MNYIRELRELVGTRPIIMAGACVILIDDEGRLLLQQRTDNGLWGLPGGSMEPGENMKEVASRELFEEVGLKAEELELLDIFSGPELYYRYPHGDEVYNVVAAYICKEYSGIIKGDEAEVQDIRFFDLNKIPNQISPPDLPIITRFLNEVRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5L4</accession>
    <name>E3E5L4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372470.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57891">
        <property type="protein sequence ID" value="ADO57891"/>
        <property type="gene ID" value="PPSC2_18400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3938"/>
    <dbReference type="HOGENOM" id="CLU_2899950_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="7297" checksum="AB5BA877C210E3C9" modified="2011-01-11" version="1">MDQFKIKKNQDIQHLLSEWVEALGYQLRQDKQSMYMERVSKREDSIDSSRHTFHSYSLAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Q6</accession>
    <name>E3E5Q6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Trans-2-enoyl-CoA reductase [NADH]</fullName>
            <shortName evidence="9">TER</shortName>
            <ecNumber evidence="9">1.3.1.44</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fabV</name>
        <name evidence="12" type="ORF">PPSC2_18575</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>a 2,3-saturated acyl-CoA + NAD(+) = a (2E)-enoyl-CoA + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:18177"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58856"/>
            <dbReference type="ChEBI" id="CHEBI:65111"/>
            <dbReference type="EC" id="1.3.1.44"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 9">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the TER reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.44" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372512.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05795"/>
    <dbReference type="EnsemblBacteria" id="ADO57933">
        <property type="protein sequence ID" value="ADO57933"/>
        <property type="gene ID" value="PPSC2_18575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3980"/>
    <dbReference type="eggNOG" id="COG3007">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057698_1_0_9"/>
    <dbReference type="OMA" id="EGCIEQI"/>
    <dbReference type="OrthoDB" id="678530at2"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050343">
        <property type="term" value="F:trans-2-enoyl-CoA reductase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01838">
        <property type="entry name" value="FabV_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024906">
        <property type="entry name" value="Eno_Rdtase_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024910">
        <property type="entry name" value="Enoyl-CoA_Rdtase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010758">
        <property type="entry name" value="Trans-2-enoyl-CoA_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37480">
        <property type="entry name" value="PTHR37480"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07055">
        <property type="entry name" value="Eno-Rase_FAD_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12242">
        <property type="entry name" value="Eno-Rase_NADH_b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12241">
        <property type="entry name" value="Enoyl_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 9" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="3 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6 9" id="KW-0520">NAD</keyword>
    <keyword evidence="5 9 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Enoyl_reductase" evidence="11">
        <location>
            <begin position="81"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="domain" description="Eno-Rase_FAD_bd" evidence="10">
        <location>
            <begin position="322"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="9">
        <location>
            <position position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="110"/>
            <end position="111"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="138"/>
            <end position="139"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="272"/>
            <end position="274"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001615"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF12241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO57933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="395" mass="43150" checksum="21416B63C57D31CD" modified="2011-01-11" version="1">MIIKPRTRGFICTTAHPVGCAQHVQEQIDYVQARPAIQGPRNVLVIGASAGYGLASRITAAFGARANTIGVYRPSNATATRTASAGWYNSAAFEKAAQDAGLKSLSVTGDAFSDEVKAKTVEAIREELGQVDLVVYSVASGRRTNPRTGETSNSVLKPIGEPYTNKTVNFHTGEVSSVTLEPATEEEVQGTVEVMGGEDWKLWIDTLRAGGVLADNATTFSFSYIGSDITQAIYREGSIGSAKDHLEATARQLNDQMKTTGGRAFVAVTKGLVTQSSSAIPVVPLYISALYKVMKEKGLHEGCIEQSYRLFAERLYAPETAVDEEGRIRIDDWELREDVQAEVAKIWEALTTHNIYELSDLEGYRREFFQLFGFEFEGVNYDADIDPIVNIPNAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5U2</accession>
    <name>E3E5U2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Iron-dependent peroxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57969.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05940"/>
    <dbReference type="EnsemblBacteria" id="ADO57969">
        <property type="protein sequence ID" value="ADO57969"/>
        <property type="gene ID" value="PPSC2_18725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4013"/>
    <dbReference type="eggNOG" id="ENOG502ZBD9">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087252_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57969.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="27291" checksum="5A5FE09119797273" modified="2015-05-27" version="2">MGVNYVWDLLMRARKQGLDVDKIRFVPAVSYSPYMELSLAELNTSHLEQVVEINPYYRFYSIFRDLFPPDAAEDLELRESLFDIMMHFLAEIDLYQGMNRREYHIRFVQRDIADGIFGPKVKEAFGQLNREEQDAIAEGLLRLYETGEAVHLLKQTMRRVFHRSIIYTNCEEKDELLIYIGQEETMLSRIKVDLILDLFLPARFTTELYWTSHFGILEEEPTMKIDAIALY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5V4</accession>
    <name>E3E5V4_PAEPS</name>
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        <submittedName>
            <fullName evidence="9">Asparagine synthase</fullName>
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        <name evidence="9" type="primary">asnO</name>
        <name evidence="9" type="ORF">PPSC2_19755</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the asparagine synthetase family.</text>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
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    <dbReference type="EnsemblBacteria" id="ADO58173">
        <property type="protein sequence ID" value="ADO58173"/>
        <property type="gene ID" value="PPSC2_19755"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.4211"/>
    <dbReference type="eggNOG" id="COG0367">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014658_3_2_9"/>
    <dbReference type="OMA" id="DWSGIYS"/>
    <dbReference type="OrthoDB" id="610569at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:asparagine synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006529">
        <property type="term" value="P:asparagine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01991">
        <property type="entry name" value="Asn_Synthase_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00712">
        <property type="entry name" value="AsnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006426">
        <property type="entry name" value="Asn_synth_AEB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001962">
        <property type="entry name" value="Asn_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033738">
        <property type="entry name" value="AsnB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00733">
        <property type="entry name" value="Asn_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13537">
        <property type="entry name" value="GATase_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001589">
        <property type="entry name" value="Asn_synthetase_glu-h"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01536">
        <property type="entry name" value="asn_synth_AEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0061">Asparagine biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="8">
        <location>
            <begin position="2"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="active site" description="For GATase activity" evidence="5">
        <location>
            <position position="2"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="263"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="377"/>
            <end position="378"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for beta-aspartyl-AMP intermediate formation" evidence="7">
        <location>
            <position position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="614" mass="69222" checksum="4A84FD0621DB352C" modified="2011-01-11" version="1">MCGITGFIQWNGDLMHQSELLLNMTQTLSDRGPDAAGTWISNPCAFGHRRLSVMDPENGAQPMIRQLEDITYTIVYNGEIYNAPELKKELQQRGHFFRTQCDTEVLLESYIEWGPDCVDRLNGIFAFAVWDSEREQVFLARDRLGVKPLFYSQTEDVFVFGSEPKALLQHPAVEAAVDAEGLAEIFIIGPARTPGHGVYSSMKELRPGHTLTYSRDGVRIQAYWKLESIAHEDNTEETALKVRELLMDTVERQLISDVPVCTLLSGGLDSSALSALAVDYYKRTGQGQVHTYSVDYVDNDKHFKAHAFQPGADAPWIQRMVDELGTNHHWIEFDTPEVVAALNNSTLTRDLPGMADVDSSLYLFCREIKKGATVAISGEAADEVFGGYPWFHREDMLNSGTFPWAVAPDMRASLLSPEVRDWIKPLEYLNDRYSEAVGEVPKLPGETGKAAQMRVMSYLNITRFMPTLLDRKDRMSMGVGLEVRVPYCDHRLVQYVWNIPWSIKMTGGREKGILRKALEGVLPDDVLYRKKSPYPKTHNPSYLAAVKKQALQLLDDSSSPLLKLIDAQKVREIAASPEASTNLPWFGQLMSGPQLFAYLTQVDNWLRTYKVAIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E617</accession>
    <name>E3E617_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR13</name>
        <name evidence="6" type="ORF">PPSC2_20045</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58236.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324680.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07275"/>
    <dbReference type="EnsemblBacteria" id="ADO58236">
        <property type="protein sequence ID" value="ADO58236"/>
        <property type="gene ID" value="PPSC2_20045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4273"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_2_9"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58236.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="38738" checksum="5A3F38ECED903693" modified="2015-05-27" version="2">MKIDDIAKLAGVSKSAVSLAFNNKPGVSEETKEHILRIAHEHGYRPRTMKSNKEFTKSHHVIRFVACKNTGIVTEQYESLPFFNELIHHITNQVREHGNTLIFSSFDSHSLEAELSALEKDQPSSGILLLGTNLTAEIIHSLQSIHSNIVVLDTCFEHVDASFVSINNYLGGYQAGQYLIQSGHRNIGYVQSSTRILNFTKRKEGFMAALEEHNLAIDHGLTFDMHPMLVMSQESFKTAIHELNELPSALFCENDYMAISAIKTFQEMNIRVPEQISVMGFDNIHEAKVISPELTTIHVKKDILARTAVNLLMERLNHNQEHHTQVLVNTEVIERRSCIDAEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E640</accession>
    <name>E3E640_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Alpha-galactosidase</fullName>
            <ecNumber evidence="3 6">3.2.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">rafA</name>
        <name evidence="11" type="ORF">PPSC2_12910</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids.</text>
            <dbReference type="EC" id="3.2.1.22"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 36 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.22" evidence="3 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56725.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599794.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00590"/>
    <dbReference type="EnsemblBacteria" id="ADO56725">
        <property type="protein sequence ID" value="ADO56725"/>
        <property type="gene ID" value="PPSC2_12910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2751"/>
    <dbReference type="eggNOG" id="COG3345">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009640_2_1_9"/>
    <dbReference type="OrthoDB" id="131906at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052692">
        <property type="term" value="F:raffinose alpha-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016052">
        <property type="term" value="P:carbohydrate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14791">
        <property type="entry name" value="GH36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038417">
        <property type="entry name" value="Alpga-gal_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000111">
        <property type="entry name" value="Glyco_hydro_27/36_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002252">
        <property type="entry name" value="Glyco_hydro_36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031705">
        <property type="entry name" value="Glyco_hydro_36_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031704">
        <property type="entry name" value="Glyco_hydro_36_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16874">
        <property type="entry name" value="Glyco_hydro_36C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16875">
        <property type="entry name" value="Glyco_hydro_36N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005536">
        <property type="entry name" value="Agal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00743">
        <property type="entry name" value="GLHYDRLASE36"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00512">
        <property type="entry name" value="ALPHA_GALACTOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_36N" evidence="10">
        <location>
            <begin position="30"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_36C" evidence="9">
        <location>
            <begin position="650"/>
            <end position="738"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="368"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="478"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="480"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="550"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="445"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="528"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="550"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR005536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR005536-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR005536-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF16875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56725.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="744" mass="85067" checksum="19770E96474299E4" modified="2015-05-27" version="2">MASIQVNPKERTFHLTNKYCSYLFRVMENGQLEHLYYGKKMEYLGQYDRFIERSYRSVSVGEFDGDLVTSLESIKQEFPSSGSGDFREPAVEIIQEDGSHVMEFIFDRYEVITEKPKIPHLPATFCNEADEAETLLITLTDSLTGAVAVLAYTIFSELPVITRSVSITNSGNSVLRVNRLMSMSLDLPDSEYEIIHLSGAWGRERHVERTPLRPGVQSIGSTRGISSHIHNPFLALAKPGSQEHQGEIYAVNLVYSGNFLAQAEVDSYSTTRLSLGIHPDKFCWTLNPGECFYSPEAVMVYSQSGLNGMSQAFHRLYNKHLIRSSWAERERPVLINNWEGTYFDFTEKKIVDMAKKASELGIELFVLDDGWFGQRNNDTSSLGDWFENREKLPNGISNLAKKINELGMKFGLWFEPEMVNSDSHIMREHPDWVVGTPGRKRKHGRHQYVLDYSQPPVVDYLFKLMDDVLSSAHIEYVKWDMNRCISEAYSLSLGKERQGEFFHRYVLGVYALYEKLITKYPEVLFESCASGGGRFDPGMLYYAPQTWTSDDSEAIERLKIQYGTSMAYPLSSMGAHVSTIPNHQVGRTAPLQTRSNVAYFGVFGYELDPLALTEEECNIIKKQIQLYKRHQRLVTQGTFYRLLSPFEKNETAWMTVDAEREHALVGWYQVLSRPNAAYSRLKLIGLDEMAVYFVEELDRRFTGSELMNIGLILTPPYKADQDFNIAEKYDFSSQLFTLTKETSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E689</accession>
    <name>E3E689_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371378.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2808"/>
    <dbReference type="EnsemblBacteria" id="ADO56774">
        <property type="protein sequence ID" value="ADO56774"/>
        <property type="gene ID" value="PPSC2_13165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2802"/>
    <dbReference type="eggNOG" id="ENOG5032VVW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1701171_0_0_9"/>
    <dbReference type="OMA" id="MFYVKSS"/>
    <dbReference type="OrthoDB" id="1556019at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="18126" checksum="30A3F22E2B3B7B12" modified="2011-01-11" version="1">MAKWNVEDQDTQYTIEYKRGFNGGKVIVNGSEQKVKSQNAFLNLIDFPIRLKEKALNVVVIGNKADLAVNGIYLGSNQPYVPVSKAPGWSWAFVVVSLVIGWLFAGVFGLCLGILGSMFYVKSSLSLHQTINRRVVSCFIVFFIISIVQIVFGLAANYWINTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D6</accession>
    <name>E3E6D6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yuaG</name>
        <name evidence="7" type="ORF">PPSC2_18890</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the band 7/mec-2 family. Flotillin subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372582.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06100"/>
    <dbReference type="EnsemblBacteria" id="ADO58005">
        <property type="protein sequence ID" value="ADO58005"/>
        <property type="gene ID" value="PPSC2_18890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4049"/>
    <dbReference type="eggNOG" id="COG2268">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038134_0_1_9"/>
    <dbReference type="OMA" id="ERQYDSE"/>
    <dbReference type="OrthoDB" id="534274at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031905">
        <property type="entry name" value="Flotillin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027705">
        <property type="entry name" value="Flotillin_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13806">
        <property type="entry name" value="PTHR13806"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15975">
        <property type="entry name" value="Flot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="PHB" evidence="6">
        <location>
            <begin position="24"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="357"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="486"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="218"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="511" mass="55923" checksum="181F1FF1DA82A19B" modified="2011-01-11" version="1">MQDIVLVPGIVVIVIVILGIAFWARYKTVGPDEGMIVTGSFLGNKNISEDESGRKIKIVRGGGAFIWPIFQQSEFISLLSHKLDVTTPEVYTEQGVPVIADGVAIIKVGSSIEDVATAAEQFIGKPLEALRGEAQEVLEGHLRAILGSMTVEEVYRNRDRFAQEVQGVAARDLKKMGLQIVSFTIKDVRDKHGYLDALGKPRIAAVKRDAEIAEAEAVRDARIQKARAEQEGQKAELLRDTNIAEAAKEKELKVASFKKEQDTARAEADQAYHIQEARAKQTAVEEQMKVELVRKEREIDIQAKEIQVREKQYDAEVKKKAEADRYAVEQAAEADKSRKMREAESLQYSIETQAKASAEQKRLNGQAEADAERAKGTADADVIRLRGLAEAEAKEKLAEAFQKFGEAAVLDIIVKMLPDLAGRIAEPIASIDKLTVVDTGKGEGATRVSNYVTELMATAPEMLKSVSGIDVEQLIKGLTTGKNGLHSVPSSGDVNKLHNPASVEMALTDKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6G4</accession>
    <name>E3E6G4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yrrI</name>
        <name evidence="7" type="ORF">PPSC2_19020</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372609.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06230"/>
    <dbReference type="EnsemblBacteria" id="ADO58033">
        <property type="protein sequence ID" value="ADO58033"/>
        <property type="gene ID" value="PPSC2_19020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4076"/>
    <dbReference type="eggNOG" id="COG0628">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031275_8_2_9"/>
    <dbReference type="OMA" id="QEDPTDA"/>
    <dbReference type="OrthoDB" id="944044at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="219"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="242"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="273"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="311"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="355" mass="39554" checksum="B840D64345A5C6B9" modified="2011-01-11" version="1">MDQLTKSRLFRYGIWTLLGLVILYFIWLLRPLFLHLYEFLKTIIAPFAVAMIISYVLNPVVSMLGGRKVPRSVAVLLIYAVFLASLIVILMNLIPMFIEQLDELNEHLPELTMHAQGLMTNMDSGILPQGVRTGMNQWFFQLENRMATGISTFMDNIGGMINMLFNVFIVPFLIFYILKDFDVFERTIVSYLPRSRRKAIVSVLKEIDQALGNYVRGQLLVCVIIGVMAYIGYMLIGMPYALLLAGVVALFNIVPYLGPFLGAAPAVIMASTVSLKMVLLVVVVNACIQVLESNVISPQVVGRTLHLHPLAIIFALLVGGEIAGIAGLILAVPVMAVLKVGLQHFFAYYVKRKTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6L1</accession>
    <name>E3E6L1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Histidine kinase</fullName>
            <ecNumber evidence="1">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">yvfT</name>
        <name evidence="12" type="ORF">PPSC2_20200</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.13.3" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372843.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07450"/>
    <dbReference type="EnsemblBacteria" id="ADO58271">
        <property type="protein sequence ID" value="ADO58271"/>
        <property type="gene ID" value="PPSC2_20200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4305"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4585">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_20_15_9"/>
    <dbReference type="OMA" id="QWPHIRV"/>
    <dbReference type="OrthoDB" id="1687028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011712">
        <property type="entry name" value="Sig_transdc_His_kin_sub3_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07730">
        <property type="entry name" value="HisKA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="13"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="107"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="132"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="191"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="11">
        <location>
            <begin position="384"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="9">
        <location>
            <begin position="528"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="7">
        <location>
            <position position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="596" mass="68557" checksum="66BB5F782B12FB24" modified="2011-01-11" version="1">MFTTWKQWLWYDWLLLCIRFVIWFSLMITTIQHQDHLTVPLWIIVLWEIAAFSIPWICLMFSYRYYLLTEMVLFGGVCFYLTLLFPAAYLAFLMPTFMIAANSAHKSFRWSGSITVVLFPLLVAIFSPGTDLWAIIPQIGLAFAIGFSFHLLVSNYRQNEIIRNQKLVLEQYLSQIEQITLLEERDRLSKDLHDTMGHSYTSIIMGLEILRTELATKDGEQKIDSLLQLARNSMEEVRAYLHQIDSPQESLPLTVTLQQLAEEFQKHAKVNVRTRIIGEEYIVSKQAKMTLYRCLQESLTNAVRHGQSTEIIVSLHFEPQQTRLDVQDNGDGVEEWKDGFGLTAMKERATQLQGRVTVYSEKGEGTFISCVLPRLIQLSDERIRLCIVDDHSFIRDSLHTILDGQEDLQVVGVAEDGEQAVELCRSLNPDLILMDLEMPNQDGIRATKIIKETWPDIRVLILSTFQDTERAKEIMRSGADGYLLKSIESRELAETIRLVYRGGTVINQDLFHRMWDGNDEEESVGPRSDGEEYGLTKRELEVLNLLSQGNRYKTISEKLYLSNGTVRNYASTLYDKLGVNNREEAVQKARDTGLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6Q5</accession>
    <name>E3E6Q5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yetL1</name>
        <name evidence="2" type="ORF">PPSC2_20385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372886.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E6Q5"/>
    <dbReference type="STRING" id="886882.PPSC2_c4365"/>
    <dbReference type="EnsemblBacteria" id="ADO58315">
        <property type="protein sequence ID" value="ADO58315"/>
        <property type="gene ID" value="PPSC2_20385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4348"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_3_9"/>
    <dbReference type="OMA" id="EFTQEDH"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="28"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="19169" checksum="1C96F5B6E38334A4" modified="2011-01-11" version="1">MNSDFKINADPSRIHLLTEKFPNVDSQSLNTWVLFVQAAHEVYNGVSSRLSEYGLSVGNLKILMPLFLHERALTPSELAEYSGVTRSTVTSVIDKLERDGIIRRSTLTDRRMTAISLTDEGKQLMTEKIPMFIQLFSDLMNEFTKEDHILFATLLNKFSSGLERIKRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6U1</accession>
    <name>E3E6U1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Iron transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">surfB1</name>
        <name evidence="5" type="ORF">PPSC2_21305</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
            <topology evidence="1">Peptidoglycan-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373061.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08535"/>
    <dbReference type="EnsemblBacteria" id="ADO58493">
        <property type="protein sequence ID" value="ADO58493"/>
        <property type="gene ID" value="PPSC2_21305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4529"/>
    <dbReference type="eggNOG" id="COG5386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_258977_0_0_9"/>
    <dbReference type="OMA" id="LHATKDQ"/>
    <dbReference type="OrthoDB" id="1779914at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06920">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1850">
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006635">
        <property type="entry name" value="NEAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037250">
        <property type="entry name" value="NEAT_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05031">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SMART" id="SM00725">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158911">
        <property type="entry name" value="SSF158911"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50978">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168877" evidence="3">
        <location>
            <begin position="29"/>
            <end position="1455"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="78"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="226"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="348"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="474"/>
            <end position="595"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="596"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="738"/>
            <end position="861"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="871"/>
            <end position="993"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="1013"/>
            <end position="1146"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="1167"/>
            <end position="1289"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="4">
        <location>
            <begin position="1331"/>
            <end position="1455"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="204"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1455" mass="160140" checksum="A62AB9A601D8BE6D" modified="2011-01-11" version="1">MKSRFNKYITTFAAILMLFSLFSPYAGATPEDESTSSNLPDSSTTVTSATYATYEYPVELPGPYVEPTHAITITEATYADGEYLIDYKPLRKTISGSTKDSSFKTNYTYPGDLIIKDGKYHFSFKFAEAQGLSKFLVEQNGETVPAKIEVDSGKASGTVSFDVYDFHQNVNTEFGFNSSSPWYVDTDPDRSVKEWIEFDPSSLRLKNSTENPTVPPVTPPVTPPSTGEKLADLDFTLLKDGTDEKSMMDGYTEKPGSLIERGGKQYARFTLKNSKQIDGFKVEQNGVLTDTSIVSEDQNANTRVIEFEVKELPAKLNAWVSINWPELSYVHTYNVDLQLSSVPVPTTLADGTYAINFNTLHATKDQPSAMAQYLLSPATLTVAKGQKEVSFTIKDSTTVTEFKTEQNGTLTDADIVSEDKTVNTRVVKFKVADLDAILNAQVHVSTTYPGGVYEMDHKLRLQFDKNSITENGTSPETKSNLDFTLLKDGTNEKSMMDGYTEKPGTLIERNGKKYVRFTLKNSTQIDGFKVEQNGVLTNVATVSEDKTANTRVIEFEVKEIPAKLSAWVSINWPELGYVHTYNVDLQLASVPTSPSLADGTYSINFNTLHATKDQPSTMAQYLLSPATLTVLKGQKEVSFTIKDSTTVTEFKTEQNGTLTDADIVSEDKTANTRVVKFKVADLDAILNAQVHVSTTYPGGVYEMDHKLRLQFDKNSITNAPTPVDPGTPGTPGTPGKNLADGTYSINFDALHATKDQKSAMAQYLLSPATLTVSKGKYEASFTIKDSTTVTEFKTEQNGTLADADIVSEDKNANTRVVKFKVADLDAILNAQVHVSTTYPGGVYEMNHKLRLQFDRSSITAKGPDNGTTTPVENGRYSIDFSVLKNGSNEISVMDGYMQKPATLLKQSGKNIIQIKMDKSSWIKTFKVNGSEAQVVEQSTSADTRTVQFEVPNLSDKVTVNTHVIVPGLDLGGIPYDHVYDVQFQFEPATIRSFVEPTSSGAADPIVKLDFDKLANGKYALKFSIVLPNGVTGSDSPAQRFITNEPAQLVVEGDKRFVGLKLQNSNEVKALRIWDNASGGYQDAEVTREDAASNTKDVRFSVSDFKNNVKGQLVVYEAPKVASSAPMVFKAEDRVEKVYDFEFKFDTSNVSYHNETKADKVEQGKNNLADGEYTANFRVLANGTDKDSLVAPFVQSLAKLIVKNGKVQAHVTVTDNQALKLFQTDFEGRYANPTIVASDTKGDTHTIAFEVPDLDKKLSVYTQVYLPEKYIFNEKFGGQIQFDRASLKGEGVNAATTATPTEPTAASTDKAAETTIPVAEAKPAVEQPVQTASEKQYTINYNVFKDKTNEASVMDGYLDKPATLIEKGDKRYIQVSLKNSSWMPTLQVEQNGTLKDVEVISTSGDTRIVQFEVGDLSQKISAYTHVIVPGLVLGGVPYDHWYTVQFQFDEASLKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6X7</accession>
    <name>E3E6X7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polysaccharide deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pdaB</name>
        <name evidence="3" type="ORF">PPSC2_22245</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373243.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09710"/>
    <dbReference type="EnsemblBacteria" id="ADO58679">
        <property type="protein sequence ID" value="ADO58679"/>
        <property type="gene ID" value="PPSC2_22245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4717"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021264_0_2_9"/>
    <dbReference type="OMA" id="VLFHNNA"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014132">
        <property type="entry name" value="PdaB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02764">
        <property type="entry name" value="spore_ybaN_pdaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="2">
        <location>
            <begin position="56"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="28914" checksum="4961EC6376788833" modified="2011-01-11" version="1">MNSFFYVLNGKKIKRFLIVMAAAIFTAGVIYVETDNVTVFSEEAPTAIYSVPTDKKLIALTFDISWGDKRTAPILKVLEDKKVTKSTFFLSAPWSKTHPELVNQIKEGGFEIGSHGHKHENYSSLSDEEIRKQISTAHTTLTELTGQSPKLIRMPNGDFDKRVLQVASTLGYKTIQWDTDSLDWKNPGTQVIIDRVVNKAHPGDIVLLHASDSCKQTHEALPIIIDKLRAQGYEFVTVSELLQQGTVKGKEVRDQALGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E729</accession>
    <name>E3E729_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">16S rRNA methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybxB</name>
        <name evidence="2" type="ORF">PPSC2_22480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373274.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09945"/>
    <dbReference type="EnsemblBacteria" id="ADO58731">
        <property type="protein sequence ID" value="ADO58731"/>
        <property type="gene ID" value="PPSC2_22480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4765"/>
    <dbReference type="eggNOG" id="COG2813">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018398_7_2_9"/>
    <dbReference type="OMA" id="HMIDVNE"/>
    <dbReference type="OrthoDB" id="1816476at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007848">
        <property type="entry name" value="Small_mtfrase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05175">
        <property type="entry name" value="MTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MTS" evidence="1">
        <location>
            <begin position="28"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="22726" checksum="9169F0BF55DB3C97" modified="2011-01-11" version="1">MADHYYSKRPETAHERRSLETVLRGRSYRFASDSGVFSKQGIDYGSRVLIEAMQLPTNASVLDVGCGYGPIGLTAATLVPDGHVTMVDINERAVQLAIENAERNGIKNVTIKQSDLFAEVQHERFDVILTNPPIRAGKETVHTIFELAYEHLNEGGALWVVIQKKQGAPSASAKIESLFGYVEEVTKDKGYRILKAEKTFRKMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R4</accession>
    <name>E3E7R4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA dimethylallyltransferase</fullName>
            <ecNumber evidence="6">2.5.1.75</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Dimethylallyl diphosphate:tRNA dimethylallyltransferase</fullName>
            <shortName evidence="6">DMAPP:tRNA dimethylallyltransferase</shortName>
            <shortName evidence="6">DMATase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Isopentenyl-diphosphate:tRNA isopentenyltransferase</fullName>
            <shortName evidence="6">IPP transferase</shortName>
            <shortName evidence="6">IPPT</shortName>
            <shortName evidence="6">IPTase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">miaA</name>
        <name evidence="10" type="ORF">PPSC2_13965</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 6 8">Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6 7">
            <text>adenosine(37) in tRNA + dimethylallyl diphosphate = diphosphate + N(6)-dimethylallyladenosine(37) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:26482"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10375"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57623"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74415"/>
            <dbReference type="EC" id="2.5.1.75"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6 9">Belongs to the IPP transferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.75" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371547.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01620"/>
    <dbReference type="EnsemblBacteria" id="ADO56947">
        <property type="protein sequence ID" value="ADO56947"/>
        <property type="gene ID" value="PPSC2_13965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2983"/>
    <dbReference type="eggNOG" id="COG0324">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032616_0_1_9"/>
    <dbReference type="OMA" id="YAKRQYT"/>
    <dbReference type="OrthoDB" id="1069591at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052381">
        <property type="term" value="F:tRNA dimethylallyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00185">
        <property type="entry name" value="IPP_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039657">
        <property type="entry name" value="Dimethylallyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018022">
        <property type="entry name" value="IPT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11088">
        <property type="entry name" value="PTHR11088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00174">
        <property type="entry name" value="miaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 6 7" id="KW-0819">tRNA processing</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="16"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Interaction with substrate tRNA" evidence="6">
        <location>
            <begin position="39"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="14"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Interaction with substrate tRNA" evidence="6">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with substrate tRNA" evidence="6">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="326" mass="37266" checksum="4E2E33172E138B8E" modified="2011-01-11" version="1">MTVASKPKLLVLVGPTAVGKTKLSIEMARQFDAEIISGDSMQVYRHMDIGTAKISEQEMKGIKHHLIDIHEPEYPYSVAQFQEDCRRLIPDIQSRGKLPFIVGGTGLYVESVCYEYQFSEVGADEAFRQEQLDYADQFGAEALHARLKAVDPESALRLHPNDRRRVVRALEIYHVSGTTLSSQLASQKKESPYQLCIVGLTMDRQMLYKRIEDRIDGMLDQGLVAEVTSLMERGVRSDAISMQGLGYKEISSYLRGEVSLEEAVTWLKRDTRHFAKRQLSWFRHMKDIQWVDVTDFENFSAHVARIHEIIAGKFRTDLEYTSKQSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E808</accession>
    <name>E3E808_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Peptidase M15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">dacB</name>
        <name evidence="10" type="ORF">PPSC2_14800</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the peptidase S11 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371717.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02435"/>
    <dbReference type="EnsemblBacteria" id="ADO57122">
        <property type="protein sequence ID" value="ADO57122"/>
        <property type="gene ID" value="PPSC2_14800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3159"/>
    <dbReference type="eggNOG" id="COG1686">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027070_7_0_9"/>
    <dbReference type="OMA" id="WNDHARM"/>
    <dbReference type="OrthoDB" id="1499212at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018044">
        <property type="entry name" value="Peptidase_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001967">
        <property type="entry name" value="Peptidase_S11_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00768">
        <property type="entry name" value="Peptidase_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00725">
        <property type="entry name" value="DADACBPTASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="4" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Peptidase_S11" evidence="9">
        <location>
            <begin position="54"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="6">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="250"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="420" mass="46484" checksum="AE9C9188DF4CDC7C" modified="2011-01-11" version="1">MFKKKQHIHADHSHFKNKARAFVLPLALMFVLSLPLTLLSPQPVLGAVTTEATPPALGTHAQAASLIDVTSGRIIYSAEGDRELRIASLTKIMTAIVAIEHGRLQDRVKVSSTAYAKEGSSLFLQMGEQMTLENMLYGLMLRSGNDAASAIAEHVGGTEEGFVHLMNDKAVQLGLNHTHFANPHGLDADGHYSSANDMARLTAYALHNPTFARIVKTELKKAPNPNDSWDYSWHNKNKMLRLYEGADGVKTGFTKKAFRCLVSSATREGRQLAAVTLNDGDDWNDHARMLDYGFRYYPLIPITDKQQPIDGYPLLTGASFSYPLHDGEKTQLHKRLVLFKNSASADRADVSFGLRGRVEFLLEGKLIGSVPVYEKGSKLPTQTIVQPQQEAPTAQVPANHTQPRGWTSKWNEILKNLFRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E862</accession>
    <name>E3E862_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Arginine repressor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">argR</name>
        <name evidence="10" type="ORF">PPSC2_15045</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Regulates arginine biosynthesis genes.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Amino-acid biosynthesis; L-arginine biosynthesis [regulation].</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the ArgR family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371768.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02665"/>
    <dbReference type="EnsemblBacteria" id="ADO57175">
        <property type="protein sequence ID" value="ADO57175"/>
        <property type="gene ID" value="PPSC2_15045"/>
    </dbReference>
    <dbReference type="GeneID" id="66576975"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3211"/>
    <dbReference type="eggNOG" id="COG1438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097103_3_0_9"/>
    <dbReference type="OMA" id="IMGTICG"/>
    <dbReference type="OrthoDB" id="1640037at2"/>
    <dbReference type="UniPathway" id="UPA00068"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034618">
        <property type="term" value="F:arginine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051259">
        <property type="term" value="P:protein complex oligomerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00173">
        <property type="entry name" value="Arg_repressor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001669">
        <property type="entry name" value="Arg_repress"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020899">
        <property type="entry name" value="Arg_repress_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036251">
        <property type="entry name" value="Arg_repress_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020900">
        <property type="entry name" value="Arg_repress_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34471">
        <property type="entry name" value="PTHR34471"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01316">
        <property type="entry name" value="Arg_repressor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02863">
        <property type="entry name" value="Arg_repressor_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01467">
        <property type="entry name" value="ARGREPRESSOR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55252">
        <property type="entry name" value="SSF55252"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01529">
        <property type="entry name" value="argR_whole"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="3 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0678">Repressor</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 7" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Arg_repressor" evidence="8">
        <location>
            <begin position="2"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="Arg_repressor_C" evidence="9">
        <location>
            <begin position="81"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="17031" checksum="4C0921807FF84B6F" modified="2011-01-11" version="1">MKGQRHIKIREIISQHEIETQDDLVEALREAGFQVTQATVSRDIKELLLIKVPMDDGRYKYSMPSDQRYNPTQKLKRTLVDNFLHIDYTTNLIVMKCLPGTANSIAALLDNIEWSEVMGTISGDDTILIICRSEENSETIVNRLMGYIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8D6</accession>
    <name>E3E8D6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ytcP1</name>
        <name evidence="7" type="ORF">PPSC2_15785</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371914.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03480"/>
    <dbReference type="EnsemblBacteria" id="ADO57328">
        <property type="protein sequence ID" value="ADO57328"/>
        <property type="gene ID" value="PPSC2_15785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3369"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_0_9"/>
    <dbReference type="OMA" id="LAMTEFR"/>
    <dbReference type="OrthoDB" id="1074175at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="260"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="74"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="32979" checksum="40829340C117847E" modified="2011-01-11" version="1">MYHKTTPYRIFNVFNICLLVILSIMCIVPLIHVLAVSFSAKSAADANLVGLWPVQFSLEAYKKTMNNPIFLHSIWISVCRTVLGTGLTLLITFLAAYPLSKETTVFRSRNIYSWLFVFSMIFNGGLVPFYMVIQKIHLMDSFWVLVLPGAVNTFLVILMLNFFRGIPKEMEEAALIDGAGHFRTLFSIFLPISMPSIATIALFSMVFHWNSWFDGLLYLSNAKDYPLATFLQTVIIQKDMSSMSMSPKEMELLSQTTVNAAQIFIGAAPILVVYPFLQKYFVKGMTLGSVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8E0</accession>
    <name>E3E8E0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_15805</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371918.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03500"/>
    <dbReference type="EnsemblBacteria" id="ADO57332">
        <property type="protein sequence ID" value="ADO57332"/>
        <property type="gene ID" value="PPSC2_15805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15805"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3373"/>
    <dbReference type="eggNOG" id="COG2972">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020473_6_2_9"/>
    <dbReference type="OMA" id="TTGWYLI"/>
    <dbReference type="OrthoDB" id="1031920at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010559">
        <property type="entry name" value="Sig_transdc_His_kin_internal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06580">
        <property type="entry name" value="His_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="288"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="309"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="583"/>
            <end position="606"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="606" mass="68862" checksum="4238E7F78B02FB13" modified="2011-01-11" version="1">MFKFNFYTKIVSIVIVLLIPVLLLYVYSNQTTTGVLREELNQSNYNQLTFFQNQVNTNIEMISSWPHLLIHDPDVASFQAIFLKDKTLNLDGINLVKRIQTKLGLQESSSNWRTGLSIYSPSLGRVVSENGASYYDQKVLNQSITNGWQVSKKRVYGKDQFIFSLYTLSPFSSLANPETANTIIKVEFDSSNIQDMLDRFKGDGRKEPFYYKKGVGVIYNRSANAELSSQLIAKLEKLGLHEVDNLTVKIGEESYLVHAVLSQTTGWYLIDYMPLSDMMSPIYSSNRLFYITVVGSLLVGIIGAYLLHSQVQVPILQLVRAFRRLKDGDYAVRLSPKGSHEFAFLSRQFNLMVEQIQELFEKVYVEKLHVKEARLKQLQSQINPHFFYNCFSFITSMAKLRNHEAVVAMAHNLSKYYRYTTRQERDLVPLSDEVEFVQYYLKIQQMRMPRLTFTIDISSQANPLLVPPLVLQPLVENAVLHGIEPQAEEGIIRIMTECVGSSMYLIVDDNGLGLSDEGITSLTLALEKPVEEKSGYGLWNVHQRMRLHFGENAGLEFSLSPLGGLRVILKWTLSIEEGQEDGLIHSSSNSRNSKLEDTDGSDITSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8J6</accession>
    <name>E3E8J6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">GTP cyclohydrolase 1 type 2 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_16795</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GTP cyclohydrolase I type 2/NIF3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372129.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04130"/>
    <dbReference type="EnsemblBacteria" id="ADO57545">
        <property type="protein sequence ID" value="ADO57545"/>
        <property type="gene ID" value="PPSC2_16795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3584"/>
    <dbReference type="eggNOG" id="COG0327">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037423_1_0_9"/>
    <dbReference type="OMA" id="EVAYDIY"/>
    <dbReference type="OrthoDB" id="502462at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002678">
        <property type="entry name" value="DUF34/NIF3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017221">
        <property type="entry name" value="DUF34/NIF3_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036069">
        <property type="entry name" value="DUF34/NIF3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13799">
        <property type="entry name" value="PTHR13799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01784">
        <property type="entry name" value="NIF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037489">
        <property type="entry name" value="UCP037489_NIF3_YqfO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102705">
        <property type="entry name" value="SSF102705"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00486">
        <property type="entry name" value="YbgI_SA1388"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR037489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="371" mass="41363" checksum="97E4B6300D2C92B4" modified="2011-01-11" version="1">MFAKGQTVISYMEQLAPKYLAVPDDRIGLQLGSLQKEIRSILVALDVNDEVVEEAIRIKADLIIAHHAIIFRPLKALNTDQPAGRLYEKLIKNDIAVYISHTNLDTAEDGMNDWMAEALGIQSEGTLEDVHTEQLFKLVVFVPKTHHQRVLDAILNAGAGHIGNYSHCSFNIDGYGTFVPGEGTQPFLGEPGKMERSEEVRIETIVPQGVRNKVVQAMLKAHPYEEVAYDLYPMDLKGRTFGLGRVGKLKEARTLREFVDVVKKGLNVEHVRVVGDLDRMIKKAAVLGGSGSRYVNKSLFKGADVLVTGDIDYHTAHDALMAGIAIIDPGHNAEKIMKPKTADWMRRRLAEDRYSTEVYVSEVNTEPFQFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8K4</accession>
    <name>E3E8K4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">DNA repair protein RecO</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">Recombination protein O</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">recO</name>
        <name evidence="9" type="ORF">PPSC2_16835</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in DNA repair and RecF pathway recombination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the RecO family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57553.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324557.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04170"/>
    <dbReference type="EnsemblBacteria" id="ADO57553">
        <property type="protein sequence ID" value="ADO57553"/>
        <property type="gene ID" value="PPSC2_16835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3592"/>
    <dbReference type="eggNOG" id="COG1381">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066632_4_0_9"/>
    <dbReference type="OrthoDB" id="1758685at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00201">
        <property type="entry name" value="RecO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022572">
        <property type="entry name" value="DNA_rep/recomb_RecO_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003717">
        <property type="entry name" value="RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042242">
        <property type="entry name" value="RecO_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33991">
        <property type="entry name" value="PTHR33991"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02565">
        <property type="entry name" value="RecO_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11967">
        <property type="entry name" value="RecO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="SSF57863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00613">
        <property type="entry name" value="reco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4 7" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_rep/recomb_RecO_N" evidence="8">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00033409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF11967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57553.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="250" mass="28120" checksum="DA1BE41BE0F67500" modified="2015-05-27" version="2">MLYRMEGIVIRSMDYGEGNKIITLCTESGGKVGVLVRGAKKSKSRHAALTQPFTYGEFVFFRNTGLGTLNAGEIIQSHHTLREDITKAAYASYACELLDRVLQDEETGAFWFKQLKACLEALESGKDPLIVMSIYEFKILQAAGYAPQLDACISSGQQCADEDMFISPRLGGVLCRGYKHFDPAALSVAPRTLKLLRLFAQIDLNRLGNIDVKDSTKLEIKHVMRQFMDMQLEVKLKSRNFLDQLDKYDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Z7</accession>
    <name>E3E8Z7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nickel ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nikD</name>
        <name evidence="5" type="ORF">PPSC2_24675</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373737.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12170"/>
    <dbReference type="EnsemblBacteria" id="ADO59204">
        <property type="protein sequence ID" value="ADO59204"/>
        <property type="gene ID" value="PPSC2_24675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5227"/>
    <dbReference type="eggNOG" id="COG0444">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_23_9"/>
    <dbReference type="OMA" id="AFIMQNP"/>
    <dbReference type="OrthoDB" id="1101128at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015413">
        <property type="term" value="F:ABC-type nickel transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014138">
        <property type="entry name" value="Nickel_NikD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02770">
        <property type="entry name" value="nickel_nikD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="10"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="46"/>
            <end position="53"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="30542" checksum="B5C6850B7018FCF0" modified="2011-01-11" version="1">MNDTAKTQVLEVSGLQVKLKTDAGAVSLLEPIHFELKKGQVLGLVGESGSGKTVTCNALLQLLDRQTMDVEGSVRLNGRELNGMATEEMRRIRGKEIAFIMQNPMRAFTPVYTIGDQFMETIRTHTGLTKQQARDLAIMALENMNLPDPAKLMKRYSFQLSGGMLQRVMIAISMCLRPAVVIADEPTTALDVVNQLQVLRELDRLRTEYDTSILLISHDLGVISQMADEVAVMQRGRIVEQAEVFQLFDQPQHEYTKMLLQARPKLSLQGINQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E988</accession>
    <name>E3E988_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Cysteine synthase</fullName>
            <ecNumber evidence="5 11">2.5.1.47</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">cysK5</name>
        <name evidence="13" type="ORF">PPSC2_15930</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>hydrogen sulfide + O-acetyl-L-serine = acetate + L-cysteine</text>
            <dbReference type="Rhea" id="RHEA:14829"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:58340"/>
            <dbReference type="EC" id="2.5.1.47"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9 11">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-cysteine biosynthesis; L-cysteine from L-serine: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the cysteine synthase/cystathionine beta-synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.47" evidence="5 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371947.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3404"/>
    <dbReference type="EnsemblBacteria" id="ADO57361">
        <property type="protein sequence ID" value="ADO57361"/>
        <property type="gene ID" value="PPSC2_15930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3402"/>
    <dbReference type="eggNOG" id="COG0031">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021018_1_0_9"/>
    <dbReference type="OMA" id="RTPVFKF"/>
    <dbReference type="OrthoDB" id="1033353at2"/>
    <dbReference type="UniPathway" id="UPA00136">
        <property type="reaction ID" value="UER00200"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004124">
        <property type="term" value="F:cysteine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005856">
        <property type="entry name" value="Cys_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005859">
        <property type="entry name" value="CysK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001216">
        <property type="entry name" value="P-phosphate_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01139">
        <property type="entry name" value="cysK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01136">
        <property type="entry name" value="cysKM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00901">
        <property type="entry name" value="CYS_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 11" id="KW-0198">Cysteine biosynthesis</keyword>
    <keyword evidence="7 9 11" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PALP" evidence="12">
        <location>
            <begin position="9"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="9">
        <location>
            <begin position="181"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="10">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR605856-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR605856-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="313" mass="33391" checksum="6425696788097004" modified="2011-01-11" version="1">MTKIHQKLTELIGNTPLLALLNYSQIQNIEANVVAKLEYLNPAGSVKDRIGYAMIKDAEEKGLINKDSIIIEPTSGNTGIGLAFAAAALGYKLIITLPETFSIERRKLLTAFGAELVLTPGTEGMRGAIKRAELLAAETPNSFIPQQFSNPANPEIHRKTTAVEIWDDTDGGVDIFIAGVGTGGTISGVGQALKERKPSVKVIAVEPFDSPVLSGGTPGSHQLQGLGAGFIPNNFNEEYVDEVFKVKNEDAFETARLLAKTEGLLVGISSGAAVYAATQIAKLPENKGKMIVVILPDTGERYLSTPLFSDVEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9E4</accession>
    <name>E3E9E4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Nuclease SbcCD subunit D</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">sbcD</name>
        <name evidence="11" type="ORF">PPSC2_16925</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'-&gt;5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 8">Heterodimer of SbcC and SbcD.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the SbcD family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372157.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04260"/>
    <dbReference type="EnsemblBacteria" id="ADO57575">
        <property type="protein sequence ID" value="ADO57575"/>
        <property type="gene ID" value="PPSC2_16925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3614"/>
    <dbReference type="eggNOG" id="COG0420">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038045_3_0_9"/>
    <dbReference type="OMA" id="GNHDQHS"/>
    <dbReference type="OrthoDB" id="1831911at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00840">
        <property type="entry name" value="MPP_Mre11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041796">
        <property type="entry name" value="Mre11_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004593">
        <property type="entry name" value="SbcD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026843">
        <property type="entry name" value="SbcD_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12320">
        <property type="entry name" value="SbcD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00619">
        <property type="entry name" value="sbcd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="6 8" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 8" id="KW-0540">Nuclease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="9">
        <location>
            <begin position="1"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="SbcD_C" evidence="10">
        <location>
            <begin position="273"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF12320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="43460" checksum="F90ACD3470473451" modified="2011-01-11" version="1">MRILHTGDWHLGRTLEGRSRLKEQEAFLEELVKMADDQQADLIMMAGDVYDSVNPSAAAEQLFYEASARLTAGGRPLVVIAGNHDQPERVASVTPLVSGRGITLLGLPHGEAVHVRTPRTGEMACIAALPYPSESRLNELLSEDGDETILREAYSRRVGMLMSQLGTAFQPDTVNLSMSHIYVLGGLESDSERPIQVGGAYTVDPSALSIGAQYTALGHLHRPQYVKGDGLMRYSGSPLAYSFSEAGQAKSVTLIDVIAGKPAQVEELYITSGRPLVRWRARGGLEEVYRWLDEGLDADAFIDLEITLDEAMSMGDIQRLRKSREGIIHIRPVYPEMAAAQLEQQRSELPVHELFRAFYQRQTGGAQPDDGLVQLFLELVEQDDARDQAEEDEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9H5</accession>
    <name>E3E9H5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA polymerase III subunit delta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqeN</name>
        <name evidence="2" type="ORF">PPSC2_17065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57606.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040103290.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04400"/>
    <dbReference type="EnsemblBacteria" id="ADO57606">
        <property type="protein sequence ID" value="ADO57606"/>
        <property type="gene ID" value="PPSC2_17065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3644"/>
    <dbReference type="eggNOG" id="COG1466">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044694_4_0_9"/>
    <dbReference type="OrthoDB" id="1199768at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009360">
        <property type="term" value="C:DNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010372">
        <property type="entry name" value="DNA_pol3_delta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005790">
        <property type="entry name" value="DNA_polIII_delta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06144">
        <property type="entry name" value="DNA_pol3_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01128">
        <property type="entry name" value="holA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_pol3_delta" evidence="1">
        <location>
            <begin position="19"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57606.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="38432" checksum="B3E44EAAA7AEA44C" modified="2015-05-27" version="2">MDVKTASRAIRKGDISPVYLLYGSEKYQMKQFVDMLKEKVVEEEHRDFAIISYDLTETPIEVVVEDAETAPFLVPKKLIIVRDTSVFAAGKDNGKIEHRLETLLTYMDNPTDYSVIVFTVQAEKLDERKKIVKKLKSDASVIAFAPMGGDDLVAWVHKRAAEREVQLAAGAAERLIQYTGTGLQSLAAEIDKLCLYAGAQGTISSADIESLVPRNTEQNVFAMVEDLANLRLDKALSIFYELLKQKEEPIKIAALITRQFRIMLQVKELAGQSYSQQQIASQLSLHPYGVKVAGDQARRFRPEQLRQLLYELGELDYHMKTGVVDKVLGLELFLMKMGAGASI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9H9</accession>
    <name>E3E9H9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">CMP deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">comEB</name>
        <name evidence="8" type="ORF">PPSC2_17085</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytidine and deoxycytidylate deaminase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372191.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04420"/>
    <dbReference type="EnsemblBacteria" id="ADO57610">
        <property type="protein sequence ID" value="ADO57610"/>
        <property type="gene ID" value="PPSC2_17085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3649"/>
    <dbReference type="eggNOG" id="COG2131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047993_2_2_9"/>
    <dbReference type="OMA" id="YPCVICA"/>
    <dbReference type="OrthoDB" id="1544522at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004132">
        <property type="term" value="F:dCMP deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006220">
        <property type="term" value="P:pyrimidine nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01286">
        <property type="entry name" value="deoxycytidylate_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016192">
        <property type="entry name" value="APOBEC/CMP_deaminase_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016473">
        <property type="entry name" value="dCMP_deaminase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015517">
        <property type="entry name" value="dCMP_deaminase-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035105">
        <property type="entry name" value="Deoxycytidylate_deaminase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11086">
        <property type="entry name" value="PTHR11086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00383">
        <property type="entry name" value="dCMP_cyt_deam_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006019">
        <property type="entry name" value="dCMP_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00903">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="7">
        <location>
            <begin position="8"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR006019-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR006019-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="19644" checksum="6BB40EF20CE34C05" modified="2011-01-11" version="1">MSADVRKDWDTYFMDIAYMVSTRSRCARRHVGAVLVQGKKLLGTAYNGAPSGVPDCSEAGCMISEEYEVVHRDGREEMVKKQRCIRTIHAEQNLLLFTDRIDREGSSVYVTDQPCWTCANMLANSGIVEIVYHRPYPKDADKVRAMMEEKGIAFRMLETYHPPQETLMDVKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9I9</accession>
    <name>E3E9I9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Probable nicotinate-nucleotide adenylyltransferase</fullName>
            <ecNumber evidence="6">2.7.7.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Deamido-NAD(+) diphosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Deamido-NAD(+) pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Nicotinate mononucleotide adenylyltransferase</fullName>
            <shortName evidence="6">NaMN adenylyltransferase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">nadD</name>
        <name evidence="8" type="ORF">PPSC2_17130</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 6">Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP + H(+) + nicotinate beta-D-ribonucleotide = deamido-NAD(+) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22860"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57502"/>
            <dbReference type="ChEBI" id="CHEBI:58437"/>
            <dbReference type="EC" id="2.7.7.18"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 6">Cofactor biosynthesis; NAD(+) biosynthesis; deamido-NAD(+) from nicotinate D-ribonucleotide: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the NadD family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.18" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372201.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04465"/>
    <dbReference type="EnsemblBacteria" id="ADO57620">
        <property type="protein sequence ID" value="ADO57620"/>
        <property type="gene ID" value="PPSC2_17130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3659"/>
    <dbReference type="eggNOG" id="COG1057">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069765_3_1_9"/>
    <dbReference type="OMA" id="IHIGHLI"/>
    <dbReference type="OrthoDB" id="1433958at2"/>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00332"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004515">
        <property type="term" value="F:nicotinate-nucleotide adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02165">
        <property type="entry name" value="NMNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00244">
        <property type="entry name" value="NaMN_adenylyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005248">
        <property type="entry name" value="NadD/NMNAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01467">
        <property type="entry name" value="CTP_transf_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00125">
        <property type="entry name" value="cyt_tran_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00482">
        <property type="entry name" value="TIGR00482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4 6" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CTP_transf_like" evidence="7">
        <location>
            <begin position="5"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="22040" checksum="60678E02A14E5787" modified="2011-01-11" version="1">MKIGIMGGTFDPIHIGHLLAGEAARDAYELDQVWFMPSHIPPHKHQAGASGKERLEMTSEAVAGHPAFEVLDIEVLRGGVSYTIDTIKKLQELHPAVDFYFIIGADMVNYLPHWQGIEELAQRICFIGVRRPGFQLALDELPHYLQDKVLLADMPVVDISSTDIRERAAEGRTIRYLVPDRVHDYITRGGLYEVQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Z6</accession>
    <name>E3E9Z6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycerol kinase</fullName>
            <ecNumber evidence="5">2.7.1.30</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">ATP:glycerol 3-phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Glycerokinase</fullName>
            <shortName evidence="5">GK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">glpK</name>
        <name evidence="9" type="synonym">glpK1</name>
        <name evidence="9" type="ORF">PPSC2_19555</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn-glycerol 3-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + glycerol = ADP + H(+) + sn-glycerol 3-phosphate</text>
            <dbReference type="Rhea" id="RHEA:21644"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17754"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.30"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="5">Activated by phosphorylation and inhibited by fructose 1,6-bisphosphate (FBP).</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Polyol metabolism; glycerol degradation via glycerol kinase pathway; sn-glycerol 3-phosphate from glycerol: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotetramer and homodimer (in equilibrium).</text>
    </comment>
    <comment type="PTM">
        <text evidence="5">The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), including enzyme I, and histidine-containing protein (HPr) are required for the phosphorylation, which leads to the activation of the enzyme.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the FGGY kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.30" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372701.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06775"/>
    <dbReference type="EnsemblBacteria" id="ADO58129">
        <property type="protein sequence ID" value="ADO58129"/>
        <property type="gene ID" value="PPSC2_19555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4169"/>
    <dbReference type="eggNOG" id="COG0554">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009281_2_3_9"/>
    <dbReference type="OMA" id="FMLMNIG"/>
    <dbReference type="OrthoDB" id="233605at2"/>
    <dbReference type="UniPathway" id="UPA00618">
        <property type="reaction ID" value="UER00672"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004370">
        <property type="term" value="F:glycerol kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019563">
        <property type="term" value="P:glycerol catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006072">
        <property type="term" value="P:glycerol-3-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00186">
        <property type="entry name" value="Glycerol_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000577">
        <property type="entry name" value="Carb_kinase_FGGY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018483">
        <property type="entry name" value="Carb_kinase_FGGY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005999">
        <property type="entry name" value="Glycerol_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000538">
        <property type="entry name" value="GlpK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01311">
        <property type="entry name" value="glycerol_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00933">
        <property type="entry name" value="FGGY_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00445">
        <property type="entry name" value="FGGY_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0319">Glycerol metabolism</keyword>
    <keyword evidence="5 6 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FGGY_N" evidence="7">
        <location>
            <begin position="4"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="8">
        <location>
            <begin position="261"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="82"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="244"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="12"/>
            <end position="14"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="310"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="314"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="329"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="411"/>
            <end position="415"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="Phosphohistidine; by HPr" evidence="5">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="497" mass="55178" checksum="8CB49658CE4A8F8C" modified="2011-01-11" version="1">MGKYILSLDQGTTSSRAILFNSEGDVVYSAQREFPQYFPHPGWVEQNANEIWSSILGVIASCLSESGVKANQIAAIGITNQRESVVVWDKNTGLPVYNVLVWQSRQTADICEELKRQGHEELFHSKTGLLIDPYFSGTKVKWILDHVEGAREKAERGDLLFGTIDSWLIWKLSGGKAHVTDYSNAARTLMYNIYELKWDEELLDILGVPKIMLPEVRPSSEVYAHTVDYHFFGQNVPIAGAAGDQQAALFGQACYEKGMIKNTYGTGCFMLMNTGDQPVESKHGLITTIAWGLEEGKVQYALEGSVFVAGSAIQWLRDGLRMFREAKDSEPYAARVSSTEGVYLVPAFVGLGSPYWDSEVRGAMFGLTRGTTKEHFIRATLESLAYQTKDVLTAMEIDSGITVKMLRVDGGAVLNNFLMQFQSDILDATVERPVIHETTALGAACLAGLAVGYWKSTDELRKRVRVETSFTPTMDEATRDSLYEGWKKAVNATMAYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA60</accession>
    <name>E3EA60_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cell division protein FtsI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pbp2</name>
        <name evidence="6" type="ORF">PPSC2_20560</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transpeptidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372922.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07815"/>
    <dbReference type="EnsemblBacteria" id="ADO58352">
        <property type="protein sequence ID" value="ADO58352"/>
        <property type="gene ID" value="PPSC2_20560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4385"/>
    <dbReference type="eggNOG" id="COG0768">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009289_1_1_9"/>
    <dbReference type="OMA" id="DKGTFQY"/>
    <dbReference type="OrthoDB" id="423699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005311">
        <property type="entry name" value="PBP_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036138">
        <property type="entry name" value="PBP_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03717">
        <property type="entry name" value="PBP_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56519">
        <property type="entry name" value="SSF56519"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_dimer" evidence="5">
        <location>
            <begin position="76"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="4">
        <location>
            <begin position="337"/>
            <end position="673"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="692" mass="77248" checksum="2F56F6F024E860B3" modified="2011-01-11" version="1">MDRGSLDKKFSFKKKNVEENEESRKKRTVLRTNLLFFSTFVLFALIITRLAVLQFIQSEELKGQQQSINTKNVPLTPSRGTIYDSTGKVRLAYSTSVQSLYVTLPKDYSKRTEKDRKPGEKLLPELNAFAAKLAAKLNELGRPEGEQLNAEEIKKRLDPDYNQYRGFTPRLVKSDLSREEIAYFLEHRTEFPGVEVVEESVRHYDPDRVAVQTIGYMYKFKGARTNRPKYKELYEANSEVLKPAQVYSESETVGYDGLELQYQDELRGKNGYKTVEVNPRSMPEGIESITPPEKGHHLYSTINKEIQQKTEQAIMDQLRWLHTHAVSGKLHQDATTGFAVAMEVETGNIVAMASMPDYDSNVWKSGSTSPSVYDEIQHKMGNGTIKSVPSGKVGPHPESSVLLGSTIKPLTVLIGLKENLFSPGQTYQDTGSAYYGKNRSSRVGNSSGHVYGSLTPSRAIEVSSNTFMVDMIGKPLYAKYGSNAGMHQGIDVWDKYMKEFGLGVPTEVDLPGEWAGRLEYTSKHESALTRLVQASFGQQGKYTAMQLAQYTTVLATKGKRMQPHLVSKIVDDQGNLVREFKPKVLNEVAFSDTYWNTVIRGMATDVKAFNGFPYDYARKTGTSQQVVGRTVKDNGVFIAFAPRQNPKLAVAVIIPEGGFGATSAGPVARKIFDAYDEVYGLDGNPKKPLVAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAQ0</accession>
    <name>E3EAQ0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">Cell division ATP-binding protein FtsE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">ftsE</name>
        <name evidence="8" type="ORF">PPSC2_22850</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Part of the ABC transporter FtsEX involved in cellular division.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer. Forms a membrane-associated complex with FtsX.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Peripheral membrane protein</topology>
            <orientation evidence="6">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432660.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10325"/>
    <dbReference type="EnsemblBacteria" id="ADO58808">
        <property type="protein sequence ID" value="ADO58808"/>
        <property type="gene ID" value="PPSC2_22850"/>
    </dbReference>
    <dbReference type="GeneID" id="66575497"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4839"/>
    <dbReference type="eggNOG" id="COG2884">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="LPMYQRA"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005286">
        <property type="entry name" value="Cell_div_FtsE_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02673">
        <property type="entry name" value="FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6 8" id="KW-0132">Cell division</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="2"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="228" mass="25907" checksum="748D65419DAACB8B" modified="2011-01-11" version="1">MIEMQDVWKTYTNGTHALQGVSVRIDRNEFVYVVGPSGAGKSTFMKLIYREEVPTKGQISVNGFNIGKLKQRKIPYVRRNIGVIFQDFRLLPRLTAYENVAFAMEVIEAPKKLIRKRVPEVLELVGLKEKMNREPAQLSGGEQQRVAIARAIVNNPSVIIADEPTGNLDPETSWEIMQLLDEINFRGTTIVMATHNKDIVNSMRKRVIAIENGNIVRDQVRGEYGYDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAV3</accession>
    <name>E3EAV3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 12">Anaerobic ribonucleoside-triphosphate reductase-activating protein</fullName>
            <ecNumber evidence="12">1.97.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">nrdG</name>
        <name evidence="13" type="ORF">PPSC2_23830</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 12">Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>glycyl-[protein] + reduced [flavodoxin] + S-adenosyl-L-methionine = 5'-deoxyadenosine + glycin-2-yl radical-[protein] + H(+) + L-methionine + semiquinone [flavodoxin]</text>
            <dbReference type="Rhea" id="RHEA:61976"/>
            <dbReference type="Rhea" id="RHEA-COMP:10622"/>
            <dbReference type="Rhea" id="RHEA-COMP:14480"/>
            <dbReference type="Rhea" id="RHEA-COMP:15993"/>
            <dbReference type="Rhea" id="RHEA-COMP:15994"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:29947"/>
            <dbReference type="ChEBI" id="CHEBI:32722"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:140311"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the organic radical-activating enzymes family.</text>
    </comment>
    <dbReference type="EC" id="1.97.1.-" evidence="12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373553.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11335"/>
    <dbReference type="EnsemblBacteria" id="ADO59017">
        <property type="protein sequence ID" value="ADO59017"/>
        <property type="gene ID" value="PPSC2_23830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5042"/>
    <dbReference type="eggNOG" id="COG0602">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089926_2_1_9"/>
    <dbReference type="OMA" id="NQVIHYL"/>
    <dbReference type="OrthoDB" id="1141206at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043365">
        <property type="term" value="F:[formate-C-acetyltransferase]-activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012837">
        <property type="entry name" value="NrdG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034457">
        <property type="entry name" value="Organic_radical-activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001989">
        <property type="entry name" value="Radical_activat_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352">
        <property type="entry name" value="PTHR30352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352:SF2">
        <property type="entry name" value="PTHR30352:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000368">
        <property type="entry name" value="NrdG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00299">
        <property type="entry name" value="anaerobic_ribonucleoside-triph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02491">
        <property type="entry name" value="NrdG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01087">
        <property type="entry name" value="RADICAL_ACTIVATING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00014281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR000368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO59017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18634" checksum="8E65D26075AE6DCD" modified="2011-01-11" version="1">MNLCGYIPESLNEGYGLRTVVFISGCRHACPGCFNPTSWNFRAGEPFTPERQQEVIRDIMDNPLLDGLTLCGGDPFFSAAECSQFVRDFRAACPDRTVWAYTGFVYEDLLIDQERQELAFLCDVIVDGRFVEQQKDLTLPFRGSRNQRLVDVRASIQAGYTVSLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB70</accession>
    <name>E3EB70_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Permease IIC component</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">celB</name>
        <name evidence="12" type="ORF">PPSC2_20795</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372971.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08040"/>
    <dbReference type="EnsemblBacteria" id="ADO58402">
        <property type="protein sequence ID" value="ADO58402"/>
        <property type="gene ID" value="PPSC2_20795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4435"/>
    <dbReference type="eggNOG" id="COG1455">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029688_1_0_9"/>
    <dbReference type="OMA" id="IHEPLIF"/>
    <dbReference type="OrthoDB" id="425893at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004501">
        <property type="entry name" value="PTS_EIIC_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004796">
        <property type="entry name" value="PTS_IIC_cello"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006351">
        <property type="entry name" value="PTS_EIIC-Cellobiose"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00410">
        <property type="entry name" value="lacE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51105">
        <property type="entry name" value="PTS_EIIC_TYPE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7 8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="64"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="128"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="171"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="203"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="231"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="270"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="307"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="331"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="356"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="382"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-3" evidence="11">
        <location>
            <begin position="7"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="402"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR006351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="433" mass="47006" checksum="0598F911FC5614B6" modified="2011-01-11" version="1">MASQQKFSYKLQKVAGTIQQNRYMSAISNGLMSTLPFLIIGAFATLFSALAWEPYQNLIAPVKAIIGLASTMTTGIIALYAVFFIAYRLAQAFDKDPLVPAATALLSFLIVTPIQTFDKVRALPLQWLGAQGLFVAMIVGLIAARLYIWIVDRNWTIKMPDGVPPTVVKTFSGLIPAVLVALVFVIVAGLFMQTSFGTVHDFIYTYLQIPLEGLGGSLGALIIALIIMQALWMFGIHGAIVILAIVKPIWMSLDLANLDAFQAGAPLPNIIGLAFWSIFCNYAPMLGFALLLVFLAKSKQLRTIGKLGLPGTFFSIHEPLIFGIPMVLNPLLAIPFIVAPIICAVLGYIATNIGLLPAPIGIYPPFGTPIFALGFIEGSWKLAAAQLVLIPISMLIYYPFFRALDKQALKKEQEAQEQLEKQASETTASPAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBU2</accession>
    <name>E3EBU2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Glycerol-3-phosphate dehydrogenase</fullName>
            <ecNumber evidence="9">1.1.5.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">glpD</name>
        <name evidence="12" type="ORF">PPSC2_24040</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>a quinone + sn-glycerol 3-phosphate = a quinol + dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:18977"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.1.5.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Polyol metabolism; glycerol degradation via glycerol kinase pathway; glycerone phosphate from sn-glycerol 3-phosphate (aerobic route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.5.3" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59066.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886068.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11545"/>
    <dbReference type="EnsemblBacteria" id="ADO59066">
        <property type="protein sequence ID" value="ADO59066"/>
        <property type="gene ID" value="PPSC2_24040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5088"/>
    <dbReference type="eggNOG" id="COG0578">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015740_5_2_9"/>
    <dbReference type="OMA" id="CIVNAAG"/>
    <dbReference type="OrthoDB" id="360065at2"/>
    <dbReference type="UniPathway" id="UPA00618">
        <property type="reaction ID" value="UER00674"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009331">
        <property type="term" value="C:glycerol-3-phosphate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052591">
        <property type="term" value="F:sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019563">
        <property type="term" value="P:glycerol catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006072">
        <property type="term" value="P:glycerol-3-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.870">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031656">
        <property type="entry name" value="DAO_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038299">
        <property type="entry name" value="DAO_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000447">
        <property type="entry name" value="G3P_DH_FAD-dep"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11985">
        <property type="entry name" value="PTHR11985"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16901">
        <property type="entry name" value="DAO_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01001">
        <property type="entry name" value="FADG3PDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00977">
        <property type="entry name" value="FAD_G3PDH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0274">FAD</keyword>
    <keyword evidence="5 9" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0319">Glycerol metabolism</keyword>
    <keyword evidence="8 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="10">
        <location>
            <begin position="24"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="DAO_C" evidence="11">
        <location>
            <begin position="406"/>
            <end position="536"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF16901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO59066.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="567" mass="62446" checksum="2620B74673566D28" modified="2015-05-27" version="2">MGEQGFAAQERTAVLERMGREHFDILIIGGGITGSGIALDAADRGLKTALVEMQDFAAGTSSRSTKLVHGGLRYLKQFEVKMVAEVGKERAIVFENGPHVTIPERMLLPFHQGGTFNAFTTSIGLLVYDFLAGVKRSEHRRMLDIQTTLEREPLLKREGLRGSGSYVEYRTDDARLTIEVMKEAVTRGALAVNYAKADKLLYDSGRISGASVTDRVTGKSYEIRASLVINAAGPWVDTLREMDRSKEGKVLRLTKGIHLVFDAGRFPLQQAVYFDTPDGRMVFAIPRDGKTYAGTTDTVYEGDTAHPRMTAEDRAYVLQAINGMFPDVKLTVTDVESSWAGVRPLIYEDGKSPSEISRKDEIWESRSGLITIAGGKLTGYRKMSELVVDRAVRELGRLHGQGFRACRTRHIPISGGSVGGSAGWDAFVSKQAIAGAALGLPPETARAWAVRYGSNVERLFAIATQSMKNATETEAALPVEVRVPLLYAMEQEMAVTPSDFFIRRTGALFFQIDEVKRWKQAVVTLMSEHAGWSAEQERQYTTELDAYLYEAVTPVEIEAEPGATKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBX0</accession>
    <name>E3EBX0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_24170</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373629.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11695"/>
    <dbReference type="EnsemblBacteria" id="ADO59094">
        <property type="protein sequence ID" value="ADO59094"/>
        <property type="gene ID" value="PPSC2_24170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5117"/>
    <dbReference type="eggNOG" id="COG0488">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_36_0_9"/>
    <dbReference type="OMA" id="QMGLQFE"/>
    <dbReference type="OrthoDB" id="1112046at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="337"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="550"/>
            <end position="638"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="588"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="369"/>
            <end position="376"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="694" mass="76847" checksum="961158DF76769870" modified="2011-01-11" version="1">MYIVNGQQLKKYHAANLILDGVTFDIHKGEKVGLIGRNGSGKTTLLRLIARLSRPDEGQLVIAKDTKIGYLPQIPAEFESFTVYETLAYAYRELKDCRNQMSTLEREMSDPVVAANPELLEKMLQTYASLQEQFERNGGYEMDANMDQVADGLGIPKAMYTRNFGSLSGGEKTKIALASQLIGRPDLLLLDEPTNHLDLKGLEWLEQFLQSYTGACVVVSHDRYFLDRVAGKMIELEDGEAFTYYTNYSGYVKEKEERLLLQFEDYKEQQKRIKKMKETIRRLEEWGRNGDNEKFFKKAASIRKALERMELVKRPVLDPQGAEFNLRLEDRSGRRVLQFEEIAKAYGERQILNGATGSLEFGEKVALLGDNGAGKTTLLKLLLGQESVDAGTVQWGARVEYGYLAQQERERDSRATVLAYFKEEAGLEEGEARGQLAKYLFYGADVFKPVSMLSGGEWSRLRLALLVMKKPNLLVLDEPTNHLDIDSREALEEALDTYTGTVLAISHDRYFVNKLAERVWELENGQLFFYLGGFDEYRAKKRELENARLQHGADAGGRSASASRAASGGGSGSGLAMPAGAASNDAGMASRTGATTGADASRARSGSAGQLGAPDARSGARGAKAAKPSRSPAASRERLERAIAAKEAELAATDAELELLGTGSDTARMAELWDVREQLQAELDTLLGEWIELE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC52</accession>
    <name>E3EC52_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribonuclease P protein component</fullName>
            <shortName evidence="6">RNase P protein</shortName>
            <shortName evidence="6">RNaseP protein</shortName>
            <ecNumber evidence="6">3.1.26.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Protein C5</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">rnpA</name>
        <name evidence="7" type="ORF">PPSC2_25515</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.</text>
            <dbReference type="EC" id="3.1.26.5"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">Consists of a catalytic RNA component (M1 or rnpB) and a protein subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the RnpA family.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.5" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373922.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13010"/>
    <dbReference type="EnsemblBacteria" id="ADO59392">
        <property type="protein sequence ID" value="ADO59392"/>
        <property type="gene ID" value="PPSC2_25515"/>
    </dbReference>
    <dbReference type="GeneID" id="66574965"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5407"/>
    <dbReference type="eggNOG" id="COG0594">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117179_9_1_9"/>
    <dbReference type="OMA" id="PEQKHFR"/>
    <dbReference type="OrthoDB" id="2014742at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004526">
        <property type="term" value="F:ribonuclease P activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001682">
        <property type="term" value="P:tRNA 5'-leader removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00227">
        <property type="entry name" value="RNase_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000100">
        <property type="entry name" value="RNase_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020539">
        <property type="entry name" value="RNase_P_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33992">
        <property type="entry name" value="PTHR33992"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00825">
        <property type="entry name" value="Ribonuclease_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00188">
        <property type="entry name" value="rnpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00648">
        <property type="entry name" value="RIBONUCLEASE_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0819">tRNA processing</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="13956" checksum="FC9784194AC6CFDF" modified="2011-01-11" version="1">MQKKLRLRNRADFGRVYRHGKSFANHQFVVYWFRRREVEQFRVGISASKKIGNAVVRNRMRRIVKEIVRHHEQELVEQIDLIFIVRKGAVTKSYQELEKSVLHVLRKASLLKSTRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECH2</accession>
    <name>E3ECH2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carbonic anhydrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cah1</name>
        <name evidence="3" type="ORF">PPSC2_01625</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0331"/>
    <dbReference type="EnsemblBacteria" id="ADO54315">
        <property type="protein sequence ID" value="ADO54315"/>
        <property type="gene ID" value="PPSC2_01625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.325"/>
    <dbReference type="eggNOG" id="COG3338">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039326_0_2_9"/>
    <dbReference type="OMA" id="RMRMENN"/>
    <dbReference type="OrthoDB" id="1572675at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004089">
        <property type="term" value="F:carbonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03124">
        <property type="entry name" value="alpha_CA_prokaryotic_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041891">
        <property type="entry name" value="Alpha_CA_prokaryot-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001148">
        <property type="entry name" value="CA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036398">
        <property type="entry name" value="CA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023561">
        <property type="entry name" value="Carbonic_anhydrase_a-class"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18952">
        <property type="entry name" value="PTHR18952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00194">
        <property type="entry name" value="Carb_anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01057">
        <property type="entry name" value="Carb_anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51069">
        <property type="entry name" value="SSF51069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51144">
        <property type="entry name" value="ALPHA_CA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169074" evidence="1">
        <location>
            <begin position="29"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="Alpha-carbonic anhydrase" evidence="2">
        <location>
            <begin position="52"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="30682" checksum="95D6D14DE6CE613A" modified="2011-01-11" version="1">MKKHWRGCLFSIFSIILALSVTGCTPSATSSTTSATSSSSANNVHAVVQKSPHWSYEGDEGPEHWGELEKDFVACGNGQEQSPINIEHSHLEASHTQQPLQVHYSTTKVSILNNGHTVQVNAASPSNDIVVDGTKFTLKQFHFHHPSEHQIDGKNAEMELHFVHQSDTGSTAVLGVLIQSGKENKAFNRIWSKLPKDISQEAVLDEDVNLAALLPKDLHSVRYNGSLTTPPCTEHVNWTVLEQPIEMSADQIKQFAAIFPDNHRPVQQLGTRELKADK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECN6</accession>
    <name>E3ECN6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Daunorubicin ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-956</name>
        <name evidence="2" type="ORF">PPSC2_04090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369443.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16890"/>
    <dbReference type="EnsemblBacteria" id="ADO54808">
        <property type="protein sequence ID" value="ADO54808"/>
        <property type="gene ID" value="PPSC2_04090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.815"/>
    <dbReference type="eggNOG" id="COG4587">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084465_0_0_9"/>
    <dbReference type="OMA" id="YLIDFPA"/>
    <dbReference type="OrthoDB" id="1552415at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010390">
        <property type="entry name" value="DUF990"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06182">
        <property type="entry name" value="ABC2_membrane_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="228"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="264" mass="30157" checksum="55D573E085C4C93D" modified="2011-01-11" version="1">MLSVYTDFIRIRFLTMLAYRVNYYSGILIYSMNIGVYYFTYKAIYGDAGSIGGFTAAQMTTYVAVSWMARAFYFNNLDREISTDIRDGSIAIQMIRPYNYVLVKFMQGLGEGMFRFLLFMIPGMAIAMLLFPVKLPSDPVAWIGFLVMLFFSFLINTQINIITGLTAFFIENNEGMMRMKRVVVDLFSGLILPISLFPGWLATVSQWMPFQAITYLPGSVFTGRVKGVGIWNVLGIQIIWLVVLLVPMIIIWRLARRRLFVQGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECZ0</accession>
    <name>E3ECZ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glyoxal reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yvgN</name>
        <name evidence="5" type="ORF">PPSC2_04330</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369493.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17140"/>
    <dbReference type="EnsemblBacteria" id="ADO54859">
        <property type="protein sequence ID" value="ADO54859"/>
        <property type="gene ID" value="PPSC2_04330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.863"/>
    <dbReference type="eggNOG" id="COG0656">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_0_1_9"/>
    <dbReference type="OMA" id="IYAPVCW"/>
    <dbReference type="OrthoDB" id="1035565at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd19157">
        <property type="entry name" value="AKR_AKR5G1-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044500">
        <property type="entry name" value="AKR5G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018170">
        <property type="entry name" value="Aldo/ket_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43827">
        <property type="entry name" value="PTHR43827"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000097">
        <property type="entry name" value="AKR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00798">
        <property type="entry name" value="ALDOKETO_REDUCTASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00062">
        <property type="entry name" value="ALDOKETO_REDUCTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00063">
        <property type="entry name" value="ALDOKETO_REDUCTASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="4">
        <location>
            <begin position="19"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Lowers pKa of active site Tyr" evidence="3">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="31454" checksum="F16CD8AF37EFEB08" modified="2011-01-11" version="1">MGNIADTALLNNGVQMPWLGFGTYKAEGNEVYEAVKTAIEVGYRHIDTAAIYGNEELVGQAIRDSGAARENLFVTTKLWNQDQGYDSTLRAFEESRKRLGLDIIDLYLIHWPGKDKYKETWKAFERLYEEGSVRAIGVSNFQIHHLEDLLKDSNIVPVINQVELHPRLTQQELHQYCREHQIQLESWSPLMKGKLTEQADIVEIAAKYGKTTSQVILRWHLDRGIVTIPKSVTAHRIRENADLFDFELTTEDIDRINGLHLDERVGTHPDKLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED79</accession>
    <name>E3ED79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">NADPH-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nfrA</name>
        <name evidence="5" type="ORF">PPSC2_02335</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the flavin oxidoreductase frp family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369076.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15100"/>
    <dbReference type="EnsemblBacteria" id="ADO54436">
        <property type="protein sequence ID" value="ADO54436"/>
        <property type="gene ID" value="PPSC2_02335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.445"/>
    <dbReference type="eggNOG" id="COG0778">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070764_0_0_9"/>
    <dbReference type="OMA" id="GMCLGYP"/>
    <dbReference type="OrthoDB" id="1847197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02146">
        <property type="entry name" value="NfsA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016446">
        <property type="entry name" value="Flavin_OxRdtase_Frp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43425">
        <property type="entry name" value="PTHR43425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005426">
        <property type="entry name" value="Frp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0288">FMN</keyword>
    <keyword evidence="3" id="KW-0521">NADP</keyword>
    <keyword evidence="2 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="4">
        <location>
            <begin position="10"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR005426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="247" mass="26985" checksum="A151EFEA21F57A46" modified="2011-01-11" version="1">MNDTISLLMNHRSVRKFKSDPITDEQLAAIVAAGQMASSSSNVQAYTVIAVTEPSLKTKLAELAGGQAYVEQCPTFLVWCADLYRLKQVTIHHQPGQPSYEGSVENYTVATIDAALAAQNAAVAAESLGLGIVYIGGIRTKIAEVSELLGLPELVYPVFGMCIGVPDQETGLRPRLPLSGVLHMNGYDKNQTMKAVEVYDHTSAEYLKERTGGQRSTPWSEQMATRLTEPARLQLKPFLEQKGFLKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED90</accession>
    <name>E3ED90_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-601</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-601</name>
        <name evidence="1" type="ORF">PPSC2_02380</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369087.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54447">
        <property type="protein sequence ID" value="ADO54447"/>
        <property type="gene ID" value="PPSC2_02380"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.457"/>
    <dbReference type="eggNOG" id="COG4632">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_762551_0_0_9"/>
    <dbReference type="OMA" id="SANYRAC"/>
    <dbReference type="OrthoDB" id="585866at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="363" mass="40035" checksum="8D96AD74635D1F89" modified="2011-01-11" version="1">MNLRPKEPKDLIVESAVIPPNIHVDVESATEGGTRRLMLSDNPETLTHVTVPTEQATLWHDVVRTTTRTVKHRIFGWHYNKIGSPVKLGITIENKSTARLEVRHIERALEIVPEDGNWIIDVGQSIAKSCLAGTMKRLKPVDRHKFGRGTALLEEFELPEGSLAGFIYDLTVEYAEGHGTLDYVIRTVVSKDTQTDLREIHKDALPPVPPPQAHPRGVWSFSETNARMPEYVVGQSANYRACATKKLNGETPADLLFTGERSELGPALDNRGQFGTIYNATIPIVNHSSEVRTVRIYANPRGGAFAGSVRVDGHVYGIPLLQDNTKVCRLTDIRIPPGQSSYSLSFMVAGSATTPLGLYVITL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEA8</accession>
    <name>E3EEA8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR3</name>
        <name evidence="6" type="ORF">PPSC2_05130</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369664.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18055"/>
    <dbReference type="EnsemblBacteria" id="ADO55031">
        <property type="protein sequence ID" value="ADO55031"/>
        <property type="gene ID" value="PPSC2_05130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1039"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_2_9"/>
    <dbReference type="OMA" id="ITSWFNT"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="6"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="346" mass="38694" checksum="09F86DFA456655CF" modified="2011-01-11" version="1">MKKEKVTIQDIADALGISRNTASKAINGSDSIPVDTRNKVIKKAIELKYKQFAYVETDSIIPRNQGNIALFTCNLPNSSHFGSFLISGLEKRISAEGYNLSIHIVRENETQAGTLPNNFEASKVDGIICIEMFDPQYSELVTSLGLPTIFIDCSVDIFCPDLKADLLLMENEHSVYFVTKSLIDRGFARIGFAGDYKHCKSFNERWVGYNRALIEAGLSVDLSCCIVDQDRNFFSESDWMDKQLEGMSALPSAFVCANDFIAVSVMKALKNKNLKIPEDIAVFGFDNAPESRIVEPHLSTVHIYNNEMGITAAEMLLARVKDPSRPYQITHIRTEPIFRESTPTLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB8</accession>
    <name>E3EEB8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rhaR1</name>
        <name evidence="5" type="ORF">PPSC2_05180</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369674.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18105"/>
    <dbReference type="EnsemblBacteria" id="ADO55041">
        <property type="protein sequence ID" value="ADO55041"/>
        <property type="gene ID" value="PPSC2_05180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1049"/>
    <dbReference type="eggNOG" id="COG1917">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_3_9"/>
    <dbReference type="OMA" id="STEIMYM"/>
    <dbReference type="OrthoDB" id="1268974at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="191"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="35360" checksum="49BF581F266FC286" modified="2011-01-11" version="1">MNGSLFEPRLRDGDYIPRFFAYYYKQWRDYTMSYHDHYSTEIMYMISGLCRVDVQTGEDTEESITLRKGEFIMLDAGIPHRLVVEGEQPCRMLNVEFGFKEGVRVGPSIQQIAAEEQEVTAFMSRPFPYLVLSDPEEVYYALKSLVLELDQRKEQPGAMAEMLFMQLLVRIARLREEAERSNTQQTDVYIKRCIEFLHLNYDRDIAVKDMAAAVNLHPGYLHRIFKKHTGLTLTAYLTMLRMDKARMLLQQTDIPIQEIADYVGVASRQYFHMLFKKHTGQTPVEYRSAVERDVRNYAEEGGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEH2</accession>
    <name>E3EEH2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LuxR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bI1</name>
        <name evidence="2" type="ORF">PPSC2_06930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370054.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1444"/>
    <dbReference type="EnsemblBacteria" id="ADO55423">
        <property type="protein sequence ID" value="ADO55423"/>
        <property type="gene ID" value="PPSC2_06930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1429"/>
    <dbReference type="eggNOG" id="COG3860">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_146070_0_0_9"/>
    <dbReference type="OMA" id="QEWNEYG"/>
    <dbReference type="OrthoDB" id="1728504at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01541">
        <property type="entry name" value="GIY-YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GIY-YIG" evidence="1">
        <location>
            <begin position="18"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="13408" checksum="82862EB1379F13C8" modified="2011-01-11" version="1">MDRRKELVQQYMEMKTEAGIYCIRNTHNGKIFIASTPNLKSLNGRRFELNMGGFKNKQLQQEWNEYGEDSFEFEVLDVLKKKDSEFFDVKDALAKLEQTWLDRLQPYGDKGYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF37</accession>
    <name>E3EF37_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yshE1</name>
        <name evidence="8" type="ORF">PPSC2_02975</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0719 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369196.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15790"/>
    <dbReference type="EnsemblBacteria" id="ADO54557">
        <property type="protein sequence ID" value="ADO54557"/>
        <property type="gene ID" value="PPSC2_02975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.566"/>
    <dbReference type="eggNOG" id="COG3766">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_122820_1_1_9"/>
    <dbReference type="OMA" id="PRTKVCE"/>
    <dbReference type="OrthoDB" id="1631646at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007140">
        <property type="entry name" value="DUF350"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03994">
        <property type="entry name" value="DUF350"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="53"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="113"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="14800" checksum="A02C4D79200A5D0D" modified="2011-01-11" version="1">MDSHISLGNALGNVGIGLLILFAILIIGYFVFSLLTRYNDNQEIARGNEAAGIYMGAKLLGLCIIVGMVSYSSHSWLDMLTWSAVGIVVLCLVYVIFDLVTPRTKVCEEIAKGNVALAQLLRSIIIGVSFVVGTFLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF83</accession>
    <name>E3EF83_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-753</name>
        <name evidence="2" type="ORF">PPSC2_03180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369240.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15990"/>
    <dbReference type="EnsemblBacteria" id="ADO54603">
        <property type="protein sequence ID" value="ADO54603"/>
        <property type="gene ID" value="PPSC2_03180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.609"/>
    <dbReference type="eggNOG" id="COG1247">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_18_2_9"/>
    <dbReference type="OMA" id="QTWREAY"/>
    <dbReference type="OrthoDB" id="1526822at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="170" mass="19428" checksum="6F317B0E498EA84F" modified="2011-01-11" version="1">MMIREAMISDAEDIAKVHVDCWRTTYKDIMPDEVLERLSYEQRIELWNANLSTEDGHLVYVAENEKGEIIGFVSGGPEKSGEYPPYGGEITAIYVLSEYHSLGLGKRLFLRLLQHFNSMDIHSVMVWVLADNPACTFYERLGAKPVVEQHIINMGGKNLNMVAYGWLLFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFC9</accession>
    <name>E3EFC9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Xylanase deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cda1</name>
        <name evidence="4" type="ORF">PPSC2_05400</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369725.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1111"/>
    <dbReference type="CAZy" id="CBM36">
        <property type="family name" value="Carbohydrate-Binding Module Family 36"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55092">
        <property type="protein sequence ID" value="ADO55092"/>
        <property type="gene ID" value="PPSC2_05400"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05400"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1095"/>
    <dbReference type="eggNOG" id="COG0726">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3693">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_794198_0_0_9"/>
    <dbReference type="OMA" id="AAGMWIG"/>
    <dbReference type="OrthoDB" id="1701876at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005084">
        <property type="entry name" value="CMB_fam6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03422">
        <property type="entry name" value="CBM_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51175">
        <property type="entry name" value="CBM6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0858">Xylan degradation</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168873" evidence="1">
        <location>
            <begin position="34"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="3">
        <location>
            <begin position="39"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="CBM6" evidence="2">
        <location>
            <begin position="240"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="357" mass="38432" checksum="3E53603759B8A0E1" modified="2011-01-11" version="1">MSIAKLGKWTAIMSITVSLFTGSLVISNNQAHAADCSNGYVALTFDDGPNPSNTRALLSALKQNGLRATLFNLGQNAQNNSSLVREQQAAGMWIGNHSWSHPHMTQLSASQMSSEITRTQQTIQSITGTAPKLFRPPYGETNGTLKSIENQNGLTEVLWNVDSQDWNGASTAQIVAAASRLKNGDVILMHDQYQTTLQAIPQIAQNLKNRNLCSGMISPSNGRAVAPDGKNNETPPNTSTKIEAVNMTKSGQYTSNISSPFNGVALYTNNDSVKFTQNFTSGTHSFSLRGASNNSNMAKVDLKIGGQTKGTFYFGGSSPAVYTLKNVNHGTGNQKIELVVTADDGTWDAYLDYLEII</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFI5</accession>
    <name>E3EFI5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370103.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20155"/>
    <dbReference type="EnsemblBacteria" id="ADO55476">
        <property type="protein sequence ID" value="ADO55476"/>
        <property type="gene ID" value="PPSC2_07175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1482"/>
    <dbReference type="eggNOG" id="ENOG5033IWE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_168781_4_1_9"/>
    <dbReference type="OMA" id="HQQLAPM"/>
    <dbReference type="OrthoDB" id="1986020at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="78" mass="8711" checksum="E553384278C3ADF1" modified="2011-01-11" version="1">MQSTNMQPLSGKELEYIVDSISNEELLLKQCAATAASIQHPAIQQACLQLARTHEHHLNLLSNALQQHQQLAPMQPQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFJ7</accession>
    <name>E3EFJ7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Magnesium transport protein CorA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">corA</name>
        <name evidence="7" type="synonym">corA3</name>
        <name evidence="7" type="ORF">PPSC2_07235</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Mediates influx of magnesium ions.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370115.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1511"/>
    <dbReference type="EnsemblBacteria" id="ADO55488">
        <property type="protein sequence ID" value="ADO55488"/>
        <property type="gene ID" value="PPSC2_07235"/>
    </dbReference>
    <dbReference type="GeneID" id="66573489"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1494"/>
    <dbReference type="eggNOG" id="COG0598">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_007127_0_0_9"/>
    <dbReference type="OMA" id="MVSVRIF"/>
    <dbReference type="OrthoDB" id="822653at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015087">
        <property type="term" value="F:cobalt ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015095">
        <property type="term" value="F:magnesium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045861">
        <property type="entry name" value="CorA_cytoplasmic_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045863">
        <property type="entry name" value="CorA_TM1_TM2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004488">
        <property type="entry name" value="Mg/Co-transport_prot_CorA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002523">
        <property type="entry name" value="MgTranspt_CorA/ZnTranspt_ZntB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01544">
        <property type="entry name" value="CorA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143865">
        <property type="entry name" value="SSF143865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144083">
        <property type="entry name" value="SSF144083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00383">
        <property type="entry name" value="corA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="253"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="285"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO55488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="311" mass="36557" checksum="21154309648805B6" modified="2011-01-11" version="1">MKIRLVNNGVFTPVEEIEMALTAPAEGFYWIDADVEDLTVLQPLFSMHDLAVEDCLSEEEQRPKIEIYESHYFIVVNSIRFDDEEIFLRALNIFLGRHFIITVTKQKINELRTLKPMLWEQEVSQPDRFMYLLVDLIVDNYFLVGDRIEVRIEKLEEDILMHTKKSHLNEIIGLRSEILWLKKVLGPQKEVINTLNKRDLRLIDDQLQKYFSDIYENAVKISETFETYRDLMGNLREAYQSSIANRANEIMRVFTAITTVFMPLTVITGIYGMNFDNMPELHTRYGYFVVIGIMVALGVSMFCIFRKKDWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFQ6</accession>
    <name>E3EFQ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370397.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1806"/>
    <dbReference type="EnsemblBacteria" id="ADO55778">
        <property type="protein sequence ID" value="ADO55778"/>
        <property type="gene ID" value="PPSC2_08540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1795"/>
    <dbReference type="eggNOG" id="ENOG50308YM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2424189_0_0_9"/>
    <dbReference type="OMA" id="FLEHHEY"/>
    <dbReference type="OrthoDB" id="2011785at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="10250" checksum="35C5A891BC3AD212" modified="2011-01-11" version="1">MAICLDYELVEIRGTVAVYKFGNCLKVLDGIFEIDLPKLISGEISMQAPIGEVVKLKNDNQSQAKAIKVFGKIYKHFLEHHEYPTKGGYYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFV7</accession>
    <name>E3EFV7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370448.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55829">
        <property type="protein sequence ID" value="ADO55829"/>
        <property type="gene ID" value="PPSC2_08765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1847"/>
    <dbReference type="HOGENOM" id="CLU_2602747_0_0_9"/>
    <dbReference type="OrthoDB" id="1639867at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="79" mass="9627" checksum="7F4BD9CE62014E46" modified="2011-01-11" version="1">MENVIALQQVRRLEQMKERRILKTFKSEIWFFQKNEETDEVEVAYKEVTVMFKYEINEIYQVHVGGQVIESTYSHLLWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFY0</accession>
    <name>E3EFY0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Endopeptidase La</fullName>
            <ecNumber evidence="1">3.4.21.53</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ylbL</name>
        <name evidence="4" type="ORF">PPSC2_09635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of proteins in presence of ATP.</text>
            <dbReference type="EC" id="3.4.21.53"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S16 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.53" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56013.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885926.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22100"/>
    <dbReference type="MEROPS" id="S16.012"/>
    <dbReference type="EnsemblBacteria" id="ADO56013">
        <property type="protein sequence ID" value="ADO56013"/>
        <property type="gene ID" value="PPSC2_09635"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09635"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2031"/>
    <dbReference type="eggNOG" id="COG3480">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042037_2_0_9"/>
    <dbReference type="OrthoDB" id="1324470at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008269">
        <property type="entry name" value="Lon_proteolytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027065">
        <property type="entry name" value="Lon_Prtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10046">
        <property type="entry name" value="PTHR10046"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05362">
        <property type="entry name" value="Lon_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51786">
        <property type="entry name" value="LON_PROTEOLYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0720">Serine protease</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="Lon proteolytic" evidence="3">
        <location>
            <begin position="235"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56013.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="37745" checksum="7A66A2908DE2519C" modified="2015-05-27" version="2">MMQINRKRAFFTTGYVLILAAMVYVLVYMPTPYLIYGPGGANEIKPMVKVQEGDSSERGSFMMTTVSARYANVIMLAMSKLDSNSEIQRKEDRLHGRSEDEYAAEQVWYMGDSQSSAMEAAYTRAHVPYRIVPDYVYVFKVPGPNSVFEPGDEILELNGTRVTDNHSIRKALEDEKPGTLAKVKLKRDGKLLAVQAPLTTITDSETGKERSGFGVSIATVQKVEPKDGRKTIHFTSTDVGGPSAGLMFTMEIYNQLTPGDLSKGYRVAGTGTIDKDGQVGAIGGAKYKIVAAERQGAELFFVPADNYKEAKAKAEQIGTQMKLVPVRKLGDALNYMEKLPIKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG34</accession>
    <name>E3EG34_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Flagellar hook capping protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">flgD</name>
        <name evidence="4" type="ORF">PPSC2_09890</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FlgD family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370680.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22360"/>
    <dbReference type="EnsemblBacteria" id="ADO56067">
        <property type="protein sequence ID" value="ADO56067"/>
        <property type="gene ID" value="PPSC2_09890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2084"/>
    <dbReference type="eggNOG" id="COG1843">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047535_1_0_9"/>
    <dbReference type="OMA" id="MQPLEDK"/>
    <dbReference type="OrthoDB" id="709873at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005648">
        <property type="entry name" value="FlgD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03963">
        <property type="entry name" value="FlgD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="150"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="177" mass="18657" checksum="068C04AE588E2B50" modified="2011-01-11" version="1">MTTTDNNVSTSNVWPNYNVNNVKTASAKDTKTMGKDQFLKILITQLQNQDPMQPLEDKEFIAQMAQFSSVEQLMNISTQLNALGQSLGTASGLIGKEVSWIEPGKKDSITGETGAGTVKSGIVDSIVIRDGVQYAKMGAAEVALKDVTSVSQANTTAPVTETSDTSSSSSTGSGENS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG67</accession>
    <name>E3EG67_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Altronate hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">uxaA</name>
        <name evidence="4" type="ORF">PPSC2_10750</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UxaA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370866.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23145"/>
    <dbReference type="EnsemblBacteria" id="ADO56260">
        <property type="protein sequence ID" value="ADO56260"/>
        <property type="gene ID" value="PPSC2_10750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2277"/>
    <dbReference type="eggNOG" id="COG2721">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029189_0_0_9"/>
    <dbReference type="OMA" id="MRHDKRE"/>
    <dbReference type="OrthoDB" id="889365at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11613">
        <property type="entry name" value="SAF_AH_GD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007392">
        <property type="entry name" value="Gal/Altron_deHydtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013974">
        <property type="entry name" value="SAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044144">
        <property type="entry name" value="UxaA/GarD_SAF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04295">
        <property type="entry name" value="GD_AH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08666">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00858">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAF" evidence="3">
        <location>
            <begin position="11"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="499" mass="54848" checksum="24D213A413E9A24D" modified="2011-01-11" version="1">MLEFIQIHDQDNVAVALRDYKQGETLAWGAQKEQCVELAEDVARGHKIALQDIPEGGHVLKYGYPIGHAIQPIQAGQHVHTHNTKTNLTGVEEYTYKPKPAPHIYEQESRTFQGFRRKDGRVGIRNELWIVPTVGCVNGIAELILNRFKQEVGDISPFENALVLKHNYGCSQLGDDHAHTRTILIDAVKHANAGGVLVLGLGCENNEMKEFKEAIGEYDSERVKFLLSQEVSDEVEEGVKLLHEIFAAVQEDRREPVPLSELNIGLKCGGSDGLSGITANPLLGRLSDYMAAQGGTTVLTEVPEMFGAETILMERAADEQVFDKIVHLINDFKQYFLDYKQPVYENPSPGNKAGGITTLEDKSLGCTQKSGSSTVTDVIQYGERLKTKGLNLLSAPGNDLVASSALAAAGCQLVIFTTGRGTPFGSFVPTMKVSTNSPLYKAKPHWIDYNAGSLVEDVSMEEALRNFVDYIIDVASGTWVNNEKNNFRELAIFKNGVTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGN8</accession>
    <name>E3EGN8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">srfJ1</name>
        <name evidence="7" type="ORF">PPSC2_03510</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369313.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16310"/>
    <dbReference type="CAZy" id="GH30">
        <property type="family name" value="Glycoside Hydrolase Family 30"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54677">
        <property type="protein sequence ID" value="ADO54677"/>
        <property type="gene ID" value="PPSC2_03510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.687"/>
    <dbReference type="eggNOG" id="COG5520">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014379_4_0_9"/>
    <dbReference type="OMA" id="FGGIAWH"/>
    <dbReference type="OrthoDB" id="447059at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004348">
        <property type="term" value="F:glucosylceramidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006665">
        <property type="term" value="P:sphingolipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033452">
        <property type="entry name" value="GH30_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001139">
        <property type="entry name" value="Glyco_hydro_30"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033453">
        <property type="entry name" value="Glyco_hydro_30_TIM-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11069">
        <property type="entry name" value="PTHR11069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02055">
        <property type="entry name" value="Glyco_hydro_30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17189">
        <property type="entry name" value="Glyco_hydro_30C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00843">
        <property type="entry name" value="GLHYDRLASE30"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Glyco_hydro_30" evidence="5">
        <location>
            <begin position="43"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_30C" evidence="6">
        <location>
            <begin position="384"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF17189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="447" mass="51593" checksum="69D372CD3DA8A58A" modified="2011-01-11" version="1">MSNQTIQWFSTSKANAWKSQAHHLTETQESADLTLTGEAYQLVEGFGGCFNELSYVALNHLDSEEREQVLHALFHPEGEHKFTICRLPIGASDYALEWYSHNETDGDMEMKHFSIERDQQYLIPFIREALQLNPDLKLFASPWSPPTWMKSPKAYNYGTLRWEKDILKAYALYFVKFVQAYRKAGITIHQVHVQNEVIADQKFPSCVWTGEQLREFIRNYLGPAFEEHGLDTEIWLGTINAPDPWEELMKKTSTGFDEYAHTVLSDPEAYKYIKGVGYQWAGKNAIQRTVASYPELRYMQTENECGNGENSWDYAKYVYNLYQHYFTNGVNAYIYWNMVLEPKGKSTWGWEQNSMITVDPANRKPILNPEYYVMKHFSHFVLPGARRIGIRGSWAGNAVAFQNTDGQKVLVIANPFKESRVLNLSVGETTHRLELEPESFNTIVIPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGR6</accession>
    <name>E3EGR6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YqbS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yqbS</name>
        <name evidence="1" type="ORF">PPSC2_05675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55150.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18580"/>
    <dbReference type="EnsemblBacteria" id="ADO55150">
        <property type="protein sequence ID" value="ADO55150"/>
        <property type="gene ID" value="PPSC2_05675"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05675"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1156"/>
    <dbReference type="eggNOG" id="ENOG5031F2E">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_141574_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020288">
        <property type="entry name" value="DUF2634"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10934">
        <property type="entry name" value="DUF2634"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55150.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="17765" checksum="5D061AC1DE392FD8" modified="2015-05-27" version="2">MANLFPETDDMIWTDTDVTDPDVLEDNRAVFGRSWRFDFEAGEFVMSPSRKIVTTGEKEAWVQWCEKAIRTPRYRHVIYSPDYGSELEELIGSSYGHAVQESEIKRMVTEALLADARTASVDQFTFRWEGEACYFSCQITNVRDETEIVESVVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGR7</accession>
    <name>E3EGR7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Baseplate J family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqbT1</name>
        <name evidence="2" type="ORF">PPSC2_05680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369783.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18585"/>
    <dbReference type="EnsemblBacteria" id="ADO55151">
        <property type="protein sequence ID" value="ADO55151"/>
        <property type="gene ID" value="PPSC2_05680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1157"/>
    <dbReference type="eggNOG" id="COG3299">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039609_0_0_9"/>
    <dbReference type="OMA" id="WIAEQIL"/>
    <dbReference type="OrthoDB" id="1656613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006949">
        <property type="entry name" value="Baseplate_J-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04865">
        <property type="entry name" value="Baseplate_J"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Baseplate_J" evidence="1">
        <location>
            <begin position="75"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="383" mass="40874" checksum="096A18961C7E30BB" modified="2011-01-11" version="1">MADLPEYLVDQTEEEILNRMLEKVPSDIDKSEGSFIWDAQAPVAFMLSEAAIWAQELLRRGFASTAASDNPDFRSPELDLRTAEHGVTRREAVAASGKVRFTGTAGTTVPAGTLVATPADDVSGEASIEYATTASVTLDEQGTGEAVIRAVNPGRRGNVPAGVIQVMATPISGVSSVINTEETKSGTDVESDQLLLERFYAKVRNQGTSGNKAQYTQWANEIAGVGGVEVVPLWKGPGTVGLYVLDTDKRAASPDIVAAVQKYIDPTQDGQGEGLAPAGPVVTVMPAAEVEINISVKVQRTKEKPSTLDEIKKLIENGVRTYLKQLAFYKADPLVRYTRISAVLLDIPIIIDFSELKINGQSNQNIEIGSGQVAVLGTVSVSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGS8</accession>
    <name>E3EGS8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Peptide ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dppA</name>
        <name evidence="6" type="ORF">PPSC2_05715</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369794.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18695"/>
    <dbReference type="EnsemblBacteria" id="ADO55162">
        <property type="protein sequence ID" value="ADO55162"/>
        <property type="gene ID" value="PPSC2_05715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1168"/>
    <dbReference type="eggNOG" id="COG0747">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017028_7_0_9"/>
    <dbReference type="OMA" id="YIAYNVM"/>
    <dbReference type="OrthoDB" id="162819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="1" id="KW-0564">Palmitate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169228" evidence="4">
        <location>
            <begin position="35"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="95"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="551" mass="61120" checksum="7A1D75A896A48071" modified="2011-01-11" version="1">MSKKYVKHKIWTVLLVLALGTVLVLSGCGGSGEGAKPEAGQPPGGAGEGAQDTLIYGRGGDSVALDPAIVTESESLKIGMQVFDTLLEYKESTTEIQPGLAESWEVSPDGLVYTFKLRQGVKFHDGSDFNAEAVVFNFDRWVDPKSPYKFEGDSFDYYDSMFGPDGSRVIKEVKAVDANTVQFTLNKPQAPFLQNIAMPSFSIASPKAIKEKKADFKSNPVGTGPFVFKEWKRNDTITLEKNPTYWKEGQPKLAKVIVRSIPDNTARFNALQNGEIDLMEDLNPDDAKQLEGNSELVKIERPSFNVAYIGFNLKKKTFNNPKVRQALNHAVNKQAIIDALFAGEAKPAVNPMPPTLWGYDESIQDYTYDLKKAKFLLAEAGFPNGLPEPLTFYAMPVSRPYMPDGKKVAEAIQADFEKIGVKVNIQSPEWATYLDDLKAGEKDDLYMLGWNGDNGDPDNFLYTLLDKDTIPGNNRSFYVNEELHKILVKAQVEVDQDKRAELYKQAQVIIKQDAPWIPLVHSTPLMAGKANLKGFVPSPAGIEAYSNIYFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGT5</accession>
    <name>E3EGT5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">dGTP triphosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dgtH</name>
        <name evidence="2" type="ORF">PPSC2_05745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369801.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18710"/>
    <dbReference type="EnsemblBacteria" id="ADO55169">
        <property type="protein sequence ID" value="ADO55169"/>
        <property type="gene ID" value="PPSC2_05745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1175"/>
    <dbReference type="eggNOG" id="COG0232">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028163_0_0_9"/>
    <dbReference type="OMA" id="AQLMDLC"/>
    <dbReference type="OrthoDB" id="370035at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008832">
        <property type="term" value="F:dGTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006203">
        <property type="term" value="P:dGTP catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006261">
        <property type="entry name" value="dNTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020779">
        <property type="entry name" value="dNTPase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026875">
        <property type="entry name" value="PHydrolase_assoc_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11373:SF32">
        <property type="entry name" value="PTHR11373:SF32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13286">
        <property type="entry name" value="HD_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01353">
        <property type="entry name" value="dGTP_triPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="1">
        <location>
            <begin position="59"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="471" mass="54846" checksum="325C73203F6F8994" modified="2011-01-11" version="1">MTWQDKREHRQFAEQTRSDASRAAYERDYSRLIHSPTFRRLQGKSQVFGAGTGDYYRTRLTHSLEVAQIAREAARSLLRRHPEVELEQADNAGLIIDPEVVECASIAHDFGHPPFGHKGEEVLDGILDQLIETKVEKISSAGGFTPESKRGQEAYARERRIYEHFEGNAHNFRLIMFLEKRENVDGLNLSDAVLLGINKYPYPGILNKKGLYLHEWEYIRSIREDWGIPDGKKTLEAQLMDLCDDIAYSAHDLEDGIKAGKIEVHEHFLYDPYLIRLITEKITTLEDSFWQGWQLAEIEQKVAAVLSEFLKVWNGKMPMCEHDYSRTRREVKAYWVSLFVSSLGVIDDGNWKKVTFVRDGSEDLDMLRTVSVLKSFAWVTMIRDLRVQRLQKRSEWMLRRLWLAFLDPETSKSIIPSDWLQRYERDQAKAKPIWTWEHMVIDYIAGMTDAFAEKIYNELYGLKVGSIYDLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGV1</accession>
    <name>E3EGV1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Polysaccharide polymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_05820</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369817.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18785"/>
    <dbReference type="EnsemblBacteria" id="ADO55185">
        <property type="protein sequence ID" value="ADO55185"/>
        <property type="gene ID" value="PPSC2_05820"/>
    </dbReference>
    <dbReference type="GeneID" id="66573777"/>
    <dbReference type="KEGG" id="ppm:PPSC2_05820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1192"/>
    <dbReference type="eggNOG" id="COG3307">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_626774_0_0_9"/>
    <dbReference type="OMA" id="RINTIQH"/>
    <dbReference type="OrthoDB" id="296061at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007016">
        <property type="entry name" value="O-antigen_ligase-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04932">
        <property type="entry name" value="Wzy_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="85"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="135"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="165"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="204"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="279"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="369"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="418"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="445" mass="49472" checksum="A051EBC0B8F6F110" modified="2011-01-11" version="1">MSNYPWTSRINTIQHVFIFLLGALAVGIAATYQPVVSIAAVCLLLLLAVSIHHPERISYAVLLSTAVSVDSLYQGGVFGIEILSLYKLGILALLVPCMLVYGIRLKFSYPVWALVIMLGITFGFSAWLPLLTTSIAVKAFVGLSLPFFFLLIQWKKDVAEKHIRLISLLPIISVVIGLGLQVLGLHSFTDVEFTGAVRVQGANIPPHLAMLSFLGIAVSLIEVKRKPRQAAFYYTVLALNFLILIATGTRGPILALLLMFAVYLFDIARQYLKGKVNYLLPLAGSFLVALGAVALQWNNLKKRSFERETDTGIDLSGRSEAWEYFLNRVHDYPWSGRGLGAVTVANDGTLFNGFVVPHNEYIRFYFDTGYIGCGLLMLSLLIVFALIYRSLAKSIKPYFATLIAGFLIYSFSDNTLSTVQMIIPFCWYLNALYQTSTQTDFRKEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH04</accession>
    <name>E3EH04_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Translation initiation factor IF-3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">infC3</name>
        <name evidence="6" type="ORF">PPSC2_07585</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IF-3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370191.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20550"/>
    <dbReference type="EnsemblBacteria" id="ADO55564">
        <property type="protein sequence ID" value="ADO55564"/>
        <property type="gene ID" value="PPSC2_07585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1568"/>
    <dbReference type="eggNOG" id="COG0290">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054919_3_2_9"/>
    <dbReference type="OMA" id="GREHQHR"/>
    <dbReference type="OrthoDB" id="1760144at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036788">
        <property type="entry name" value="T_IF-3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036787">
        <property type="entry name" value="T_IF-3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001288">
        <property type="entry name" value="Translation_initiation_fac_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019815">
        <property type="entry name" value="Translation_initiation_fac_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019814">
        <property type="entry name" value="Translation_initiation_fac_3_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10938">
        <property type="entry name" value="PTHR10938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00707">
        <property type="entry name" value="IF3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05198">
        <property type="entry name" value="IF3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54364">
        <property type="entry name" value="SSF54364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55200">
        <property type="entry name" value="SSF55200"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00168">
        <property type="entry name" value="infC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IF3_N" evidence="5">
        <location>
            <begin position="5"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="IF3_C" evidence="4">
        <location>
            <begin position="89"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF05198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="171" mass="17928" checksum="9E951A26C76386A4" modified="2011-01-11" version="1">MAVLINEQIKADEVVLTGLSGENLGVVSKSEALAMARSKGVDLVCTSLMSSPPPCSLVAKGKGKALAQKKAAASKTNNGRAAGNSGKEKVKELRFTAHIEDHDYDTKLRQADKQLRSGKPVQLVVKASGAKESPVAKAVLERLLGDLKEVGVKETGIQTGGKGSQVKLNPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH55</accession>
    <name>E3EH55_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hemagglutination protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1639"/>
    <dbReference type="EnsemblBacteria" id="ADO55615">
        <property type="protein sequence ID" value="ADO55615"/>
        <property type="gene ID" value="PPSC2_07790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1620"/>
    <dbReference type="HOGENOM" id="CLU_2410502_0_0_9"/>
    <dbReference type="OrthoDB" id="1994369at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10780" checksum="B88AFCB62BD760A8" modified="2011-01-11" version="1">MNGKGKSTLDRHVNKYDYDSPEKYLHDAREFLEKRPTSTTQTFVSNEGTYFRYDSATNEFGIINKYGGISTYFKPEDGLEYWLEQISLYSPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH60</accession>
    <name>E3EH60_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8 9">Uroporphyrinogen decarboxylase</fullName>
            <shortName evidence="8">UPD</shortName>
            <shortName evidence="8">URO-D</shortName>
            <ecNumber evidence="4 8 9">4.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">hemE</name>
        <name evidence="12" type="ORF">PPSC2_08865</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>4 H(+) + uroporphyrinogen III = 4 CO2 + coproporphyrinogen III</text>
            <dbReference type="Rhea" id="RHEA:19865"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57308"/>
            <dbReference type="ChEBI" id="CHEBI:57309"/>
            <dbReference type="EC" id="4.1.1.37"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 8 9">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 4/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 10">Belongs to the uroporphyrinogen decarboxylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.37" evidence="4 8 9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370469.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21330"/>
    <dbReference type="EnsemblBacteria" id="ADO55851">
        <property type="protein sequence ID" value="ADO55851"/>
        <property type="gene ID" value="PPSC2_08865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1869"/>
    <dbReference type="eggNOG" id="COG0407">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040933_0_1_9"/>
    <dbReference type="OMA" id="LWLMRQA"/>
    <dbReference type="OrthoDB" id="1104410at2"/>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00321"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004853">
        <property type="term" value="F:uroporphyrinogen decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00717">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00218">
        <property type="entry name" value="URO_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038071">
        <property type="entry name" value="UROD/MetE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006361">
        <property type="entry name" value="Uroporphyrinogen_deCO2ase_HemE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000257">
        <property type="entry name" value="Uroporphyrinogen_deCOase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01208">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51726">
        <property type="entry name" value="SSF51726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01464">
        <property type="entry name" value="hemE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00906">
        <property type="entry name" value="UROD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 8 9" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="6 8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 8 9" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Uroporphyrinogen_deCOase" evidence="11">
        <location>
            <begin position="20"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="25"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="319"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="8">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="351" mass="39748" checksum="C33B1410995BE7AE" modified="2011-01-11" version="1">MTYNDTFIRACRKQAVDHIPVWYMRQAGRYDPEYRKIKEKYTLLEICRQPELAAEVTLMPVRKLGVDAAILYSDIMNPVASLGVDFDIVKNIGPVIDNPLRTAADVDNLRPIDVERDLGHILETIRILDRELNVPLITFAGAPFTIASYLIEGRPSKGYIRTKAMMYGEPELWHRLMDKLGDMVITYVRAHIANGGKAFQLFDSWVGALSPYDFQTFVLPTIVRIFHELSDLNVPKIYFPGVSSGELLPHLSGVKADVIGLDWRVSIPEGRRRLGNSFGVQGNLDPYVLTAPMNVIKQYAKKIVDEGILEPGYIFNLGHGLFPEASLDKLRELTDYVHEYSRSVLSKNEHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHD4</accession>
    <name>E3EHD4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphatidylinositol alpha-mannosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370542.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21690"/>
    <dbReference type="EnsemblBacteria" id="ADO55925">
        <property type="protein sequence ID" value="ADO55925"/>
        <property type="gene ID" value="PPSC2_09220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1943"/>
    <dbReference type="eggNOG" id="COG1051">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_139752_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="2">
        <location>
            <begin position="40"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="127" mass="14901" checksum="145C6F451DA063A2" modified="2011-01-11" version="1">MLVKLINKIPRDWLIFMYKHTPFTRLKNALVYRAQHKFLIAVLGIFTNDAGEVLLLKHVYRKQPWGIPGGWMELEQPETALRREVREETGLEVEITSLAQAQFGQLPNRVDLIFKCHHTRKSLFRSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHD5</accession>
    <name>E3EHD5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Aminotransferase</fullName>
            <ecNumber evidence="2">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">alaT3</name>
        <name evidence="4" type="ORF">PPSC2_09225</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370543.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21695"/>
    <dbReference type="EnsemblBacteria" id="ADO55926">
        <property type="protein sequence ID" value="ADO55926"/>
        <property type="gene ID" value="PPSC2_09225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1944"/>
    <dbReference type="eggNOG" id="COG0436">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_4_3_9"/>
    <dbReference type="OMA" id="SDENYEH"/>
    <dbReference type="OrthoDB" id="554560at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="3">
        <location>
            <begin position="38"/>
            <end position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="394" mass="43375" checksum="84CC856AB14CC308" modified="2011-01-11" version="1">MTNVSTAVSITDFLTPAVREMPPSGIRRFFEYSAGRKDIVSLGVGEPDFVTPQHVRKACITALENGKTSYTPNAGLPELREEIAGYLESSFSTSYNPADEIMVTVGSSEALDLALRALITTHDEILIPAPCYISYSPITFLNGGHTVTVETSADQQFKLTAEALKSKLTPRSKVLILCYPNNPTGGVMTYEDWLPIARLVEEHNLIVISDEIYAELTYGQQHVSFASLPGMKERTLLISGFSKAFAMTGWRVGYVCGPKELISAMLKIHQYTAMCAPIIGQIAAIESLRNGLEEKDRMMESYNQRRKWFVAALCQTGLPCHEPNGAFYAFPSIMHTGLSSEQFAKRLLEEQGVITVPGSAFGPGGEGFIRCSYASSREQLETALERISVFLKRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHD6</accession>
    <name>E3EHD6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">RNA polymerase sigma factor SigD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sigD</name>
        <name evidence="6" type="ORF">PPSC2_10000</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370700.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22470"/>
    <dbReference type="EnsemblBacteria" id="ADO56089">
        <property type="protein sequence ID" value="ADO56089"/>
        <property type="gene ID" value="PPSC2_10000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2106"/>
    <dbReference type="eggNOG" id="COG1191">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014793_8_1_9"/>
    <dbReference type="OMA" id="IKFETYA"/>
    <dbReference type="OrthoDB" id="1857862at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007624">
        <property type="entry name" value="RNA_pol_sigma70_r3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012845">
        <property type="entry name" value="RNA_pol_sigma_FliA_WhiG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04539">
        <property type="entry name" value="Sigma70_r3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000770">
        <property type="entry name" value="RNA_pol_sigma-SigE/K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02479">
        <property type="entry name" value="FliA_WhiG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00716">
        <property type="entry name" value="SIGMA70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="5">
        <location>
            <begin position="221"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="262" mass="30438" checksum="C38A455BE30ABF9F" modified="2011-01-11" version="1">MNERKAAHLNHSDLWEQWKEYGDKEAKKQLIEKYLHIVEYVSGRLAVGLPKNVSKDDLASNGVMGLIDALEKFDYERGLQFETYASWRVRGAILDGLRQGDWVPRSVREKAKKIEDAYQHLEQRYLRTVSDEEMSHYLDVSEKEFQSMIQEVAVMSIVSLEDPIREEESETRLSLLVDEKAKNPDHKVNEFTLRDALAQGIDKLTEKERIVVSLLYYEDLSLSEIAEVMSLSPSRISQLHSKAILRLRATLDKQRDLLMRKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHF8</accession>
    <name>E3EHF8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nucleic-acid-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylxR</name>
        <name evidence="2" type="ORF">PPSC2_10090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430067.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22560"/>
    <dbReference type="EnsemblBacteria" id="ADO56111">
        <property type="protein sequence ID" value="ADO56111"/>
        <property type="gene ID" value="PPSC2_10090"/>
    </dbReference>
    <dbReference type="GeneID" id="66577897"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2127"/>
    <dbReference type="eggNOG" id="COG2740">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147970_2_1_9"/>
    <dbReference type="OMA" id="CVGCQEM"/>
    <dbReference type="OrthoDB" id="2067975at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00279">
        <property type="entry name" value="YlxR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007393">
        <property type="entry name" value="DUF448"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037465">
        <property type="entry name" value="YlxR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035931">
        <property type="entry name" value="YlxR-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34215">
        <property type="entry name" value="PTHR34215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04296">
        <property type="entry name" value="YlxR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64376">
        <property type="entry name" value="SSF64376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YlxR" evidence="1">
        <location>
            <begin position="9"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="11470" checksum="8A0553EAF0967424" modified="2011-01-11" version="1">MKQRKIPLRKCVACHEMMPKKQLIRVVKTPEDEVLIDLTGKKSGRGAYLCGKAACFKLAQKSKALDRALKHSVHPDIYEQLSRDFAAVEEEFLAAQGSVQDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHJ3</accession>
    <name>E3EHJ3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribonuclease Y</fullName>
            <shortName evidence="7">RNase Y</shortName>
            <ecNumber evidence="7">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rny</name>
        <name evidence="10" type="synonym">cnpD4</name>
        <name evidence="10" type="ORF">PPSC2_10255</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Endoribonuclease that initiates mRNA decay.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the RNase Y family.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013309958.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22725"/>
    <dbReference type="EnsemblBacteria" id="ADO56146">
        <property type="protein sequence ID" value="ADO56146"/>
        <property type="gene ID" value="PPSC2_10255"/>
    </dbReference>
    <dbReference type="GeneID" id="66577864"/>
    <dbReference type="KEGG" id="ppm:PPSC2_10255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2161"/>
    <dbReference type="eggNOG" id="COG1418">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028328_1_0_9"/>
    <dbReference type="OMA" id="PHAILGM"/>
    <dbReference type="OrthoDB" id="1012190at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004521">
        <property type="term" value="F:endoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00335">
        <property type="entry name" value="RNase_Y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006675">
        <property type="entry name" value="HDIG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017705">
        <property type="entry name" value="Ribonuclease_Y"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022711">
        <property type="entry name" value="RNase_Y_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12826:SF15">
        <property type="entry name" value="PTHR12826:SF15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00013">
        <property type="entry name" value="KH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12072">
        <property type="entry name" value="RNase_Y_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="SSF54791"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00277">
        <property type="entry name" value="HDIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03319">
        <property type="entry name" value="RNase_Y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 7" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 7" id="KW-0540">Nuclease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="HD" evidence="9">
        <location>
            <begin position="330"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="38"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="514" mass="58205" checksum="C891F0B55B30DAA2" modified="2011-01-11" version="1">MMTAIWFVLVAVAALFFGFGIGYFIRKSIAEAKISSAEEAAAQIVENAKKEAEALKKETVLEAKDEIHRIRAEAEKETRERRNEIQRQERRLLQKEESLDKKLESLERKEEQVANKEKRIDETQQQIDLIYKSQVTELERISNLTMEDARSIILTNVEQEVRHETAQMIKEIEQQAKEEADKKSREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLIIDDTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQATFEVGVHSLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMAGELGEDVVLARRAGLLHDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADALSAARPGARRETLETYIRRLEKLERISESFEGVEKSYAIQAGREVRVMVQPEKIDDAEAFRLARDITKTIENELDYPGHIKVTVIRETRAVEYAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHM5</accession>
    <name>E3EHM5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DinB_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370893.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2315"/>
    <dbReference type="EnsemblBacteria" id="ADO56287">
        <property type="protein sequence ID" value="ADO56287"/>
        <property type="gene ID" value="PPSC2_10880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2304"/>
    <dbReference type="eggNOG" id="ENOG5032WP2">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120523_0_0_9"/>
    <dbReference type="OrthoDB" id="1564766at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024775">
        <property type="entry name" value="DinB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12867">
        <property type="entry name" value="DinB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DinB_2" evidence="1">
        <location>
            <begin position="22"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="190" mass="21641" checksum="773A6D9EAE09BBFC" modified="2011-01-11" version="1">MNKNIGIKDILVRFDEISKHYVRELDKYSLAELCRKPSENEWSLGQMYLHLPHSTLNLQLRLAEQCMALGGGSEEGGGKTEAGHAVFEQGSFPPVRIQVPADLQHTPPQPESKEQLVAKLEEARRRMHEIGASLQNIDPERLQRKATHPAVAFGALNAVEWFTMVEMHYRHHLLQKERLDAFLQTAELLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI10</accession>
    <name>E3EI10_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">arsR1</name>
        <name evidence="3" type="ORF">PPSC2_12335</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371203.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2630"/>
    <dbReference type="EnsemblBacteria" id="ADO56599">
        <property type="protein sequence ID" value="ADO56599"/>
        <property type="gene ID" value="PPSC2_12335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2617"/>
    <dbReference type="eggNOG" id="COG0607">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108527_0_0_9"/>
    <dbReference type="OMA" id="KNHLYEQ"/>
    <dbReference type="OrthoDB" id="1385159at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="135"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="25070" checksum="63774C6A41159793" modified="2011-01-11" version="1">MKEPLSSANVLKEDLYKQLARIGKCLSSDKRLEILNVLSQSPKTVEKLAACTGMNMANVSRHLQILLDAKLVKFAKRGTYAIYSLADPEIIDFMASLWRISEKQLPDIAKLKEDFLNNLDGIQTLTMDEVMEKVNNDSILLVDLRSKEDFEMGHISGAISMPMTELDTLMQELPKDAEVIAYCQGPLCVYSALAVQKLQQEGYKAYRMDEGINEWQGHFLPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIC8</accession>
    <name>E3EIC8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA N6-adenosine threonylcarbamoyltransferase</fullName>
            <ecNumber evidence="6">2.3.1.234</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">N6-L-threonylcarbamoyladenine synthase</fullName>
            <shortName evidence="6">t(6)A synthase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">tRNA threonylcarbamoyladenosine biosynthesis protein TsaD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">tsaD</name>
        <name evidence="8" type="synonym">gcP</name>
        <name evidence="8" type="ORF">PPSC2_06085</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>adenosine(37) in tRNA + L-threonylcarbamoyladenylate = AMP + H(+) + N(6)-L-threonylcarbamoyladenosine(37) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:37059"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10163"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:73682"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74418"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.3.1.234"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="6">Binds 1 Fe(2+) ion per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the KAE1 / TsaD family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.234" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369873.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19050"/>
    <dbReference type="EnsemblBacteria" id="ADO55241">
        <property type="protein sequence ID" value="ADO55241"/>
        <property type="gene ID" value="PPSC2_06085"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06085"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1247"/>
    <dbReference type="eggNOG" id="COG0533">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023208_0_2_9"/>
    <dbReference type="OMA" id="HLEGHIY"/>
    <dbReference type="OrthoDB" id="1257362at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061711">
        <property type="term" value="F:N(6)-L-threonylcarbamoyladenine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002949">
        <property type="term" value="P:tRNA threonylcarbamoyladenosine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01445">
        <property type="entry name" value="TsaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000905">
        <property type="entry name" value="Gcp-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017861">
        <property type="entry name" value="KAE1/TsaD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017860">
        <property type="entry name" value="Peptidase_M22_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022450">
        <property type="entry name" value="TsaD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735">
        <property type="entry name" value="PTHR11735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735:SF6">
        <property type="entry name" value="PTHR11735:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00814">
        <property type="entry name" value="TsaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00789">
        <property type="entry name" value="OSIALOPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00329">
        <property type="entry name" value="gcp_kae1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03723">
        <property type="entry name" value="T6A_TsaD_YgjD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01016">
        <property type="entry name" value="GLYCOPROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="4 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TsaD" evidence="7">
        <location>
            <begin position="39"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="149"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="288"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="354" mass="37831" checksum="80F1CAC9F81D08E7" modified="2011-01-11" version="1">MTQAEKAGTGSASGEPCYILAVETSCDETAVSVVKNGTEVLSNLISSQIETHKAFGGVVPEVASRKHVESITYMLDEAMQTSGISPREISAVAVTQGPGLVGALLVGIVAAKSAAMAFGKPLIGTHHIAGHIYANQLEHDIVYPCIALVVSGGHTELVLMESEGQFQLIGRTRDDAVGEAYDKVARAIGFPYPGGPHVDRVAHESEEVVTLPRAWLEPDSYDFSFSGLKSAVLNVINQTKMRGETVHAGAIARGFQESVVEVLVEKAIRAMREYGAKQLLLCGGVAANRGLRTALRERCEREGIKLLVPSMKYCTDNAAMIGAAAYAKWKRGEFTSLDMKADPGLSLEEWSVQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG4</accession>
    <name>E3EIG4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">mcpA3</name>
        <name evidence="11" type="ORF">PPSC2_06235</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369908.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19190"/>
    <dbReference type="EnsemblBacteria" id="ADO55277">
        <property type="protein sequence ID" value="ADO55277"/>
        <property type="gene ID" value="PPSC2_06235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1285"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="QIDGNIR"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="298"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="318"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="9">
        <location>
            <begin position="389"/>
            <end position="626"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO55277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="676" mass="73009" checksum="25425602C93E6270" modified="2011-01-11" version="1">MTKEKQTVPWWNRFLKQFYLMRTKLIISFLAVLLIPSLLIGYFSYQGATTQLSQQMANSVYTNLYLIQSNVNQYVSPIMKDVDVLTSEIQADSIGSDQEALQKKLDAIVKAHPELDAALLGNAKGEYIRSPLKKEADYDPRERKWYKNAMLHKGNIFVGVPVASVTTGNLVVNVSATLKNGEGAVALALNLDKMGDSLQSVKIGERGGLIIVDSDHKVVSGAGTAFDKTGKKPADTMEGLPKVAATGENDTPSVSQIKFMNRDVLAFTLKDPLTGWNIVALSDLEDYSDAAQPILRQSLIVIVISILAAAIIIVLMIRSFLIPLKKLQAGTRIVRDGNLTERVNISRKDEFGELAQNFDQMTHSLHTMVSEVNQTSSRLASSSLVIKESTEQTTESVQHVAETVMESAENAATSAEASEQTANAVEEMAKGVSTIAESASSIVDSAGQTEQDVAQGSQMISHVRTQMDRILEAVSQTASLMDELSQLSDDAKQMNAAIAAIAKQTNLLSLNASIEASRAGEAGRGFAVVAIEVRKLSEQSKESADSISQIITQMLDLIQRSTATMNGNVRNQVGEGLRISQDAEGAFANIERSTSHIVEQIQSVSAAAEQISASTEEVSATVTHLASLSRNSADSSQTTSAAAQEQMAAMEEIASSSQELSNMAQDLQELVKRFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIH5</accession>
    <name>E3EIH5_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Ferrichrome-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yxeB5</name>
        <name evidence="3" type="ORF">PPSC2_06290</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
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            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19235"/>
    <dbReference type="EnsemblBacteria" id="ADO55288">
        <property type="protein sequence ID" value="ADO55288"/>
        <property type="gene ID" value="PPSC2_06290"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.1298"/>
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        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_0_1_9"/>
    <dbReference type="OMA" id="ETQYNDP"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
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        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168979" evidence="1">
        <location>
            <begin position="45"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="2">
        <location>
            <begin position="76"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="331" mass="36736" checksum="633B3A64D072ABB2" modified="2011-01-11" version="1">MINKNSTINKKPTRQYTSLICLFSLMGALLLGCGASDNNQTANSNTTASTKTSETATTRSYTDYKGHTVDIPTTPGRIAYFGENYGDLLVLGVQAVGTSTSMIEGKIYEKKVQNVSDLGFPIDLEKTLALQPDLIITADTDEKQYAALSKIAPTIMFDTFAPLNERLVHLGDIVNKKKTAEDWLAQYKIKEAEMWSKLQAKGVKPGETASVFTYYPGDRLFVMARTGLSQILYEKNGLKPTPLIQKALDEDKGFVQLSQEVIGQYAGDRIFILNSPSSEARQSTEQLMKSKLWLQLPAVKQGHVYMQDIGKTESDASTREWLLEELPKLIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIS0</accession>
    <name>E3EIS0_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">napB</name>
        <name evidence="2" type="ORF">PPSC2_09290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO55939">
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        <property type="gene ID" value="PPSC2_09290"/>
    </dbReference>
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    <dbReference type="PATRIC" id="fig|886882.15.peg.1957"/>
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    <dbReference type="OrthoDB" id="1744037at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="18591" checksum="306FE8DE1DFA542F" modified="2011-01-11" version="1">MNKEEQVIMGFRDLYNKMVWLNKDKMEDSLKGYKSSEVHCMEYIEKNVDSNVTTLAESLYMTSGAISKITKKLIKKGLIESYQKPDNKKEIYFRLTEQGKVIYKIHEELHKEFQERDKAVFEQVTDEQFDSMLSFIDKYSRHLDAEIKKKGNDIKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ88</accession>
    <name>E3EJ88_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fe-S oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvfV</name>
        <name evidence="2" type="ORF">PPSC2_11300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370980.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23655"/>
    <dbReference type="EnsemblBacteria" id="ADO56375">
        <property type="protein sequence ID" value="ADO56375"/>
        <property type="gene ID" value="PPSC2_11300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2391"/>
    <dbReference type="eggNOG" id="COG0247">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023081_1_0_9"/>
    <dbReference type="OMA" id="NSCLMHI"/>
    <dbReference type="OrthoDB" id="647535at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004017">
        <property type="entry name" value="Cys_rich_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02754">
        <property type="entry name" value="CCG"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CCG" evidence="1">
        <location>
            <begin position="3"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="CCG" evidence="1">
        <location>
            <begin position="131"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="242" mass="26966" checksum="668F49F7F1A02C35" modified="2011-01-11" version="1">MKVSLFITCLSDAIYPKVGEAMARLLARYGVELEFPKVQTCCGQPSYNSGYWDETRAAAKTILKAFNDSDFVVAPSGSCTYMIHHYPELFKDEPEWLDSARRLEQKTYEFTQFMVQVLGVTDVGASFPHTVTYHPSCHGTRLLGVKEEPMKLLGSVKGLQLVPLPFAEDCCGFGGTFAVKMPDISGAMVTEKVDHIRETEAEVLVGLDMACLMNIAGNLRYREEPVRVMHLAELLYEGVKHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ89</accession>
    <name>E3EJ89_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yvfW</name>
        <name evidence="8" type="ORF">PPSC2_11305</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370981.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23660"/>
    <dbReference type="EnsemblBacteria" id="ADO56376">
        <property type="protein sequence ID" value="ADO56376"/>
        <property type="gene ID" value="PPSC2_11305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2392"/>
    <dbReference type="eggNOG" id="COG1139">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027059_2_0_9"/>
    <dbReference type="OMA" id="SMLTDEC"/>
    <dbReference type="OrthoDB" id="688908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019516">
        <property type="term" value="P:lactate oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004452">
        <property type="entry name" value="4Fe-4S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024569">
        <property type="entry name" value="4Fe-4S-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024185">
        <property type="entry name" value="FTHF_cligase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003741">
        <property type="entry name" value="LUD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47153">
        <property type="entry name" value="PTHR47153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11870">
        <property type="entry name" value="DUF3390"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13183">
        <property type="entry name" value="Fer4_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02589">
        <property type="entry name" value="LUD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00273">
        <property type="entry name" value="TIGR00273"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="7">
        <location>
            <begin position="306"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="506" mass="56245" checksum="14ABF01803198F7B" modified="2011-01-11" version="1">MTAVHTHSLNQKVKERAELALNDDFLRNAVRFTTERLRNGKRVASEQHGNWEEWRERGRQIRLHTIAHLDYYLNLFVENARANGVHIHFADTAVDAVRITLDIAAHNQARSVVKSKSMVSEELHLNQALEGADIETIESDLGEYIIQLAGEAPSHIVIPAIHKNRYQIAELLSKEAGEELSADTTILAGFVRKKLREKFLDADIGMTGCNFAIAETGSMVLFENEGNARMVSTLPKTQITLMGMERIIPSWTDLEVMATLLPRSATGQKLTMYMSGISGPRRSQDADGPEEMHIIIVDNGRSLQLGNPEFQELLNCIRCGACLNACPVYRHIGGHAYGGTYSGPIGAVLTPALHGNIEEWNDIASASSLCGACYEACPVKIPLHDMLVYLRRRKVEAGKGDNLETAAMKGFASVVSSSKRFAAAIRLGQIAQKAVVRKGEITLKLGPLKGWNTYRVAPSLAKKSFRQHWNTLARELEQERKVMHRDILSRMETILADRRKGGVQHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ95</accession>
    <name>E3EJ95_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_11335</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370987.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2410"/>
    <dbReference type="EnsemblBacteria" id="ADO56382">
        <property type="protein sequence ID" value="ADO56382"/>
        <property type="gene ID" value="PPSC2_11335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2398"/>
    <dbReference type="eggNOG" id="COG2755">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3401">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_715410_0_0_9"/>
    <dbReference type="OMA" id="FQVRNMA"/>
    <dbReference type="OrthoDB" id="1247435at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01821">
        <property type="entry name" value="Rhamnogalacturan_acetylesterase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037459">
        <property type="entry name" value="RhgT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43695">
        <property type="entry name" value="PTHR43695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168966" evidence="1">
        <location>
            <begin position="31"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="SGNH_hydro" evidence="2">
        <location>
            <begin position="188"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="41638" checksum="D0A61A4C967C914D" modified="2011-01-11" version="1">MKWKKGLTGMLLAAFLCGAPGVGIATPAHASNGEYKFDFGGGTVETGYTGVSASLSYDSARGYGFRTPENMRNVSASGTGVASDAVQFLTTGTKSENTFDVDLPPGLYEVSVTLGNTSRSSVAAEGVYQIINMTGNGAKDRFQIPVTDGQLNLLITEGKEGAVFTLSALEIRQLSSNPATNRTIYIGGDSTVCNYYPLDSSVQAGWGQLLPEFVNTNTFQIRNMASGGQIARGFHQDGQLEAIVQYIKPGDYFILQLGINDTNPKHNESEAEFKDWMRDMIRQVKAKGATVILSTPQGRATDFNANNVHNAENRWYRSAILALAQEEQTPLVDLNVLSSAYFTSIGKEATLALYMNGDTLHPNFAGARQLARLVAHDLKRQGLSGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJN5</accession>
    <name>E3EJN5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0011"/>
    <dbReference type="EnsemblBacteria" id="ADO59406">
        <property type="protein sequence ID" value="ADO59406"/>
        <property type="gene ID" value="PPSC2_28025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5940"/>
    <dbReference type="HOGENOM" id="CLU_2260992_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="12193" checksum="66F9630C04A4AD5C" modified="2011-01-11" version="1">MFILSEKEHQLYQTMVFHGWAMLGRTQMPALQVHEADTKVLEGLYLKLDEFIRTSFESVNVDQKTSMRSMVIIDEFHMVELCRIHSIIKNEVETRKQNSNYNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJN9</accession>
    <name>E3EJN9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386051.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0245"/>
    <dbReference type="EnsemblBacteria" id="ADO59637">
        <property type="protein sequence ID" value="ADO59637"/>
        <property type="gene ID" value="PPSC2_26950"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26950"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5698"/>
    <dbReference type="HOGENOM" id="CLU_1254937_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="25812" checksum="C4827717BD973839" modified="2011-01-11" version="1">MKNKSVHITYQVVREIFTSEIEKDIVAFQDVTQIEGKEDLVSEGISTLEKIASVNNDKVVPIMEKLCLFKKGVVEAHKEENIFVDSTRYNQFYIPKPFSYIQEFGMEGAVLLKSEGYSHNLYTLDGDRLMHPIHFDDIYEEYYDLYAIIAALNKRDDIRWKKSKWNNSYFVSTLGGKRLEFRYLPTNGIWDEIKYIKNSFDVRDYLKKEVLGISKFAKDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJW8</accession>
    <name>E3EJW8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PPSC2_28250</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="14 15">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
            <plasmid evidence="14 15">pSC2</plasmid>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the transposase 35 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the transposase 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386401.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0598"/>
    <dbReference type="EnsemblBacteria" id="ADO59987">
        <property type="protein sequence ID" value="ADO59987"/>
        <property type="gene ID" value="PPSC2_28250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5990"/>
    <dbReference type="eggNOG" id="COG0675">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032903_0_0_9"/>
    <dbReference type="OMA" id="YNACATG"/>
    <dbReference type="OrthoDB" id="222391at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001959">
        <property type="entry name" value="Transposase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010095">
        <property type="entry name" value="Transposase_IS605_OrfB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021027">
        <property type="entry name" value="Transposase_put_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12323">
        <property type="entry name" value="HTH_OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01385">
        <property type="entry name" value="OrfB_IS605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07282">
        <property type="entry name" value="OrfB_Zn_ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01766">
        <property type="entry name" value="tspaseT_teng_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-0614">Plasmid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="HTH_OrfB_IS605" evidence="13">
        <location>
            <begin position="24"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_IS605" evidence="11">
        <location>
            <begin position="183"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="OrfB_Zn_ribbon" evidence="12">
        <location>
            <begin position="309"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF12323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO59987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="44429" checksum="4934A55811DA4A6A" modified="2011-01-11" version="1">MQHSQDFLSENLNGQDFSLKNLIHKAYKYRIYPNRMQQQLIHQMFGCCRFVFNYFLGQWKDTIAATGKGLSYNACATGLPALKQQCDWLKKVDSIALQSAVRNVADSFGRFFTKQNRAPRFKSRKHPVQSYTTKFTNSNIAIQNNKLKLPKLGWIRFANSRALEGRILSATVRRNAAGKYFVSIVCEVNVQQLPLTDKEVGIDLGLKEFAVCSDGVRIANPKVFRKYEQKLAFWQRRLARRTKGGSNWNKAKQKVAQIHEKIVNIRHDFLHKLTTMLIRENQTISIEHLRVANMLKNHKLAKSIADAAWSEFKRQLIYKAVWYGRILKMADTFAPTSQACCVCGFIHKEVKDLSVRQWTCPSCHTTHDRDENAAHNIKQMAGSWSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKT7</accession>
    <name>E3EKT7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SAF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385952.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0144"/>
    <dbReference type="EnsemblBacteria" id="ADO59538">
        <property type="protein sequence ID" value="ADO59538"/>
        <property type="gene ID" value="PPSC2_27405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5800"/>
    <dbReference type="eggNOG" id="COG3745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1018800_0_0_9"/>
    <dbReference type="OrthoDB" id="416689at1239"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017592">
        <property type="entry name" value="Pilus_assmbl_Flp-typ_CpaB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031571">
        <property type="entry name" value="RcpC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013974">
        <property type="entry name" value="SAF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16976">
        <property type="entry name" value="RcpC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08666">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00858">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03177">
        <property type="entry name" value="pilus_cpaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168499" description="SAF domain-containing protein" evidence="1">
        <location>
            <begin position="26"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="SAF" evidence="2">
        <location>
            <begin position="34"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="273" mass="30006" checksum="4B0CB84C38BE554A" modified="2011-01-11" version="1">MKKKKILILALQLLLLIGTAVGFMAYTNGELQPVKVYVFNKDLNVNHQITAADIKEVSVPQSGVTQDFALEPKQFLNKYVGTEVYAGSFIYKKQIKDKGQLDPFKSMDLTKYRKISIPISYVEGFGGNVKRGDAVDLVFTGVGKKKDDKGTEQSFQYSKAFLQNVLIYNVTTSDGFEFKDHSTTDLTKTSGQSGEKIDTSANSDELAVVTLAVTLDQAEEITARMNAGNVRLVSRFADNESYETLGFVLGDYSKVYSAPANAETGRGTINANQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKX3</accession>
    <name>E3EKX3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386292.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0489"/>
    <dbReference type="EnsemblBacteria" id="ADO59878">
        <property type="protein sequence ID" value="ADO59878"/>
        <property type="gene ID" value="PPSC2_25775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5422"/>
    <dbReference type="HOGENOM" id="CLU_2303142_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11491" checksum="F9E7475EA41BB16D" modified="2011-01-11" version="1">MTIQRYSVAIVGVPISYEKYLEIYNKPDLNFDVLHPCDAIYAIVGKTIANEECPPYGDLSNIKSLSIEDLKKKFIQVKGILLEELDIDEEPKLYSFMQFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKZ1</accession>
    <name>E3EKZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386310.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0507"/>
    <dbReference type="EnsemblBacteria" id="ADO59896">
        <property type="protein sequence ID" value="ADO59896"/>
        <property type="gene ID" value="PPSC2_28680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6086"/>
    <dbReference type="eggNOG" id="ENOG5030TEQ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035400_0_0_9"/>
    <dbReference type="OrthoDB" id="1012952at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="470" mass="55797" checksum="CD1214535A92C259" modified="2011-01-11" version="1">MKDFIFEQELQNLNNNIIRDYLAEVIASYNMGHYRSAVVSLYNVVIYDLMFKLKTLKEVYEDQNASNILEELGNNNTNQSYIQWEKRLFDHIVDHTNLLDEHELRLVERLKEDRNHCAHPAMKDFTIFIPNKDQTRAHLRNMFEIIFLRDPLLAKEIINPILEDIKGYNNTFGTSINPDRFGKYLTSKYYKKLNQKVEKKLFDTLWTFTFIKQGEEFDQNRLACYYALCSLVEMNTMRFLNYVKNDIQFYSKVKINDKDAYHTNKDEYAKLRAIDIRTIVSSQAFLIYFCSEFKEFYDAMKEYLQEALTHEAEKNINLKARAIFMSNSFADHLKAIDEYKKQAFSVFVGSFGFYHYELKDTSVDQEQIAFLCKEAEERNCTASLVDFVIDWINNISSYDSTYKVFQNLVFPVFKYFNNDDVDRMAQIMSNNSQIHGDTRNRNKYIPELKDKITETIGADFPFDNYYVFTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL21</accession>
    <name>E3EL21_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0190"/>
    <dbReference type="EnsemblBacteria" id="ADO59583">
        <property type="protein sequence ID" value="ADO59583"/>
        <property type="gene ID" value="PPSC2_27195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5752"/>
    <dbReference type="HOGENOM" id="CLU_2956322_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6801" checksum="F559E0FC4E665BF7" modified="2011-01-11" version="1">MIYGIENNDGFFYNFVLETWTIWSHECQLPSLQLAENIYLLYSDSNDFSSASVVSVKAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL47</accession>
    <name>E3EL47_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO59609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386023.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0216"/>
    <dbReference type="EnsemblBacteria" id="ADO59609">
        <property type="protein sequence ID" value="ADO59609"/>
        <property type="gene ID" value="PPSC2_27095"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5730"/>
    <dbReference type="HOGENOM" id="CLU_758302_0_0_9"/>
    <dbReference type="OrthoDB" id="2134166at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="365" mass="43352" checksum="FFD5F4CE63B71EC9" modified="2011-01-11" version="1">MDLKTLNVLRRLNRYASPIKEKRIQEEVLRDCREKRVGLTRDEIIGQGLNIYEKRGEKISTIIDEAIHEDLVRVYSFRENSREIMITPKGIESMMKIYTSDFSSDFVSFENELRNKTEELGELPLKRMLVASLYWRGKTVEEICQKFFKMSHYHKSILGYHEYLLQRYGHMSLEDKQIFHFQPMLFLPKKWMNEVVTLEIEGIDAPDQMILMKPYPNKRYVVAGCRFGKEKTSAGFYPIITDPNSFPEKLDVTLRWKVGEKLTVVHHLLIEFKTLAHDGNLFSSEQRISRSCNMDSFSLTTFMEQDEHLGRGRHQRYFTLFTLGNKHREYIIQEKVTLTNFPMHLHATFHADRHFQQWLEKKEIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBY1</accession>
    <name>A0A0D5ZBY1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Diacylglycerol kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">dgkA</name>
        <name evidence="12" type="ORF">PPSC2_16845</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial diacylglycerol kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324558.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04180"/>
    <dbReference type="EnsemblBacteria" id="AKA44285">
        <property type="protein sequence ID" value="AKA44285"/>
        <property type="gene ID" value="PPSC2_16845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3596"/>
    <dbReference type="eggNOG" id="COG0818">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112343_2_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14265">
        <property type="entry name" value="UDPK_IM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.3610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000829">
        <property type="entry name" value="DAGK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036945">
        <property type="entry name" value="DAGK_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033717">
        <property type="entry name" value="UDPK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34299">
        <property type="entry name" value="PTHR34299"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01219">
        <property type="entry name" value="DAGK_prokar"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01069">
        <property type="entry name" value="DAGK_PROKAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="27"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="93"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="AKA44285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="124" mass="13641" checksum="A330FAA6ABDFA71A" modified="2015-05-27" version="1">MRRQPWRMTFRYAAEGVIYALRTQVNMRIHVVVALLVIVAGLTLRISRLDWLFVCLAIAIVIVAELINTAVEAAVDLISPDIHPLAKAAKDTAAGAVLLAAVFAVIIGIFVFYRPLLTLMSQLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC88</accession>
    <name>A0A0D5ZC88_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-1017</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-1017</name>
        <name evidence="2" type="ORF">PPSC2_04395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025677306.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17225"/>
    <dbReference type="EnsemblBacteria" id="AKA44189">
        <property type="protein sequence ID" value="AKA44189"/>
        <property type="gene ID" value="PPSC2_04395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.878"/>
    <dbReference type="eggNOG" id="COG4858">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120449_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="143" mass="15922" checksum="16BFA5EEF82D4F6F" modified="2015-05-27" version="1">MNKAKNYTLIAWVALSMFFLTQAIIGWFITFTGGDIKPFEKISLSTLIIIAAGAILLVEALMNFMDRPEEGEETQQPDHAPAKPQMNFKSILMYVVLVVVILVAGLALRSVLPVFKISPWMNLVLAAIGFIGLKPIFLRKKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC94</accession>
    <name>A0A0D5ZC94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YoeB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yoeB</name>
        <name evidence="3" type="ORF">PPSC2_04830</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599507.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17725"/>
    <dbReference type="EnsemblBacteria" id="AKA44191">
        <property type="protein sequence ID" value="AKA44191"/>
        <property type="gene ID" value="PPSC2_04830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.972"/>
    <dbReference type="eggNOG" id="ENOG5033587">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_976068_0_0_9"/>
    <dbReference type="OrthoDB" id="1464545at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031841">
        <property type="entry name" value="Endopep_inhib"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16800">
        <property type="entry name" value="Endopep_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5002300547" evidence="2">
        <location>
            <begin position="26"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="110"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="29171" checksum="EA523D7AF48A1345" modified="2015-05-27" version="1">MKINTKLSALCVAATLLSAAQVAAAAPAVTSPANAAQPSVAVPSATVPTQVPAPAASASVATPAPAQAPSVPATTAPAAGSVQAATPAAPSAPAPRPSASVAPAAAPSVPSTAKPQQPSTSAPAAATATSVNPTQLDKLNHESAIPLVLEAQSRYQYAISGGKSLGQAFQLNGKSYRYLSEDIGTKTKLINYLTQAYTKQASEQFVGKFFVEVNGRLAQLNADGGNLLEFSRATAKMVTMTPVKRSYLLTVPYPAETKQANEKITVNFEKVGSYWKVSSAPHVIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCM2</accession>
    <name>A0A0D5ZCM2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44297">
        <property type="protein sequence ID" value="AKA44297"/>
        <property type="gene ID" value="PPSC2_18265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3906"/>
    <dbReference type="HOGENOM" id="CLU_171848_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="10980" checksum="592EC49453E62790" modified="2015-05-27" version="1">MQRADGNPAGDFDVVTKDEIIEVKKSLKAVTNVEQFDKYVNVNHDGYFNHNQKKVILYIDKPLTNLHQNDLIKLEIIKSKGVTIVNSIDELKEVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCT3</accession>
    <name>A0A0D5ZCT3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886187.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44366">
        <property type="protein sequence ID" value="AKA44366"/>
        <property type="gene ID" value="PPSC2_26855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5676"/>
    <dbReference type="HOGENOM" id="CLU_2466135_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="88" mass="10237" checksum="D640D1B5CB1D0393" modified="2015-05-27" version="1">MKIDYVGRTALLRTINPSLVHYESNNNPELNEEWLWDGEYLTFKAGHIHKFYITSNYTVEELKIKPSDKSTIKISSNDQVTSQTVFID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCZ8</accession>
    <name>A0A0D5ZCZ8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HNHc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_28390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44397">
        <property type="protein sequence ID" value="AKA44397"/>
        <property type="gene ID" value="PPSC2_28390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6022"/>
    <dbReference type="HOGENOM" id="CLU_2718578_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002711">
        <property type="entry name" value="HNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01844">
        <property type="entry name" value="HNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00507">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNHc" evidence="1">
        <location>
            <begin position="11"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="72" mass="8122" checksum="3308D9F706ABE8C0" modified="2015-05-27" version="1">MVNMISQNYQTFRKHILQRDKFTCYYCGKPGDTIDHKIPLSKGGFTSPKNCVVACSTCNVEKGDTHHNPETS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4K3</accession>
    <name>E3E4K3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ykkD1</name>
        <name evidence="6" type="ORF">PPSC2_13765</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56902.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599882.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2937"/>
    <dbReference type="EnsemblBacteria" id="ADO56902">
        <property type="protein sequence ID" value="ADO56902"/>
        <property type="gene ID" value="PPSC2_13765"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13765"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2933"/>
    <dbReference type="eggNOG" id="COG2076">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133067_1_3_9"/>
    <dbReference type="OrthoDB" id="1990300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000390">
        <property type="entry name" value="Small_drug/metabolite_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045324">
        <property type="entry name" value="Small_multidrug_res"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30561">
        <property type="entry name" value="PTHR30561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00893">
        <property type="entry name" value="Multi_Drug_Res"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56902.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="12461" checksum="2234974EFFF1CB0B" modified="2015-05-27" version="2">MNWVYLISAGIFEIIGVLLINRFNQTRSWKSLTLLITGFGLSFIFLSLAMQTLPMGTAYAVWTGIGASGGAILGMIFYSEPRGLMRILCIGLVLSSAVGLKLARACTQTVQLVEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4P3</accession>
    <name>E3E4P3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATPase AAA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoVK</name>
        <name evidence="3" type="ORF">PPSC2_13940</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CbxX/CfxQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371542.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01595"/>
    <dbReference type="EnsemblBacteria" id="ADO56942">
        <property type="protein sequence ID" value="ADO56942"/>
        <property type="gene ID" value="PPSC2_13940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2978"/>
    <dbReference type="eggNOG" id="COG0464">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008749_1_0_9"/>
    <dbReference type="OMA" id="KQALHMM"/>
    <dbReference type="OrthoDB" id="1115436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041627">
        <property type="entry name" value="AAA_lid_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000641">
        <property type="entry name" value="CbxX/CfxQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17866">
        <property type="entry name" value="AAA_lid_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00819">
        <property type="entry name" value="CBXCFQXSUPER"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="99"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="36982" checksum="D89303B4CD4C345E" modified="2011-01-11" version="1">MNGRGIAAGKRSEERPSRQINVVLRSPEPIASVTVDETEAVASTKSQALPQYLSLYQEIQKELDHLVGLDNIKELVFEVYAFLQIAHMRTDAGLLSNAHVYHMIFKGNPGTGKTTVARIIAKMLQKMGVLSKGHLIEVERADLVGEYIGHTAQKTRDLVKKSLGGVLFIDEAYSLARGGEKDFGKEAIDTLVKAMEDQKNQFILILAGYSGEMDFFLRTNPGLPSRFPIQLDFPDYTVDQLIQISELMAKERDYILMPQSILKMKEHLLNERNDSLHAFSNARYVRNVIEKAIRHQAVRLLNQYRSGQPGKQELMTLRPEDLKMDKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4R0</accession>
    <name>E3E4R0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">5-methylthioadenosine/S-adenosylhomocysteine deaminase</fullName>
            <shortName evidence="2">MTA/SAH deaminase</shortName>
            <ecNumber evidence="2">3.5.4.28</ecNumber>
            <ecNumber evidence="2">3.5.4.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mtaD</name>
        <name evidence="4" type="synonym">ssnA</name>
        <name evidence="4" type="ORF">PPSC2_14410</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H(+) + H2O + S-adenosyl-L-homocysteine = NH4(+) + S-inosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:20716"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:57985"/>
            <dbReference type="EC" id="3.5.4.28"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H(+) + H2O + S-methyl-5'-thioadenosine = NH4(+) + S-methyl-5'-thioinosine</text>
            <dbReference type="Rhea" id="RHEA:25025"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:48595"/>
            <dbReference type="EC" id="3.5.4.31"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="2">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.28" evidence="2"/>
    <dbReference type="EC" id="3.5.4.31" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371637.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02060"/>
    <dbReference type="EnsemblBacteria" id="ADO57038">
        <property type="protein sequence ID" value="ADO57038"/>
        <property type="gene ID" value="PPSC2_14410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3076"/>
    <dbReference type="eggNOG" id="COG0402">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012358_2_0_9"/>
    <dbReference type="OMA" id="ALIGKVC"/>
    <dbReference type="OrthoDB" id="1592010at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090614">
        <property type="term" value="F:5'-methylthioadenosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050270">
        <property type="term" value="F:S-adenosylhomocysteine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01281">
        <property type="entry name" value="MTA_SAH_deamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023512">
        <property type="entry name" value="Deaminase_MtaD/DadD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="3">
        <location>
            <begin position="59"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="433" mass="47028" checksum="7F7F0E93C681DDC6" modified="2011-01-11" version="1">MTVNKWMIKNGSFAVNGPEAGVIHGFMIVEDSRITYIGETLPAGEEETEAIDGNGLLFLPGLINTHGHAAMSLLRGYGDDLALQVWLQEKMWPMEAKFTSTDVYWGTSLSVLEMLKGGTTTFLDMYDHMDEVARVAEESGIRASLMRGAIGLCSEEEQRIKLAEAVTFARNWHGKADGRITTMMSPHAPYTCPPAFIEKFVQAAHDLDLPLHTHMSETIAEVEQNVRDYGLRPVAHLDKLGFFSRPSLVAHGVHLNDEEIALLAERGVAVSHNPGSNLKLASGVARVPELLRAGVTVSLGTDGPASNNNLDMFEEMRLAALIHKGVSGDPTAVPANEALRLATEYGAKSIGLKEVGALAAGNKADFIALDLNQAHFLPRTDLISHAVYSASAKDVAHVWVDGRQVVKNGECLTMDEERIKHEAQAAFEGLLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4T0</accession>
    <name>E3E4T0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">caiE</name>
        <name evidence="1" type="ORF">PPSC2_14510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371656.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02165"/>
    <dbReference type="EnsemblBacteria" id="ADO57058">
        <property type="protein sequence ID" value="ADO57058"/>
        <property type="gene ID" value="PPSC2_14510"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3096"/>
    <dbReference type="eggNOG" id="COG0663">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064827_4_1_9"/>
    <dbReference type="OMA" id="YVTIGHN"/>
    <dbReference type="OrthoDB" id="1242595at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="168" mass="17777" checksum="0560E8DB554DF5E6" modified="2011-01-11" version="1">MLIRYNGNMPQLHSSVYVAEGAKVVGKVTIGQESSVWFNAVLRGDMAPIIIGERCNIQDGVVGHVNTDQPLLLANDVSVGHAAIIHGCTIGKGTLIGMGAIVLNGAELGEYALIGAGSVVTENTKIPPYTLSIGTPAKVVRELTDADLQRMSRTTLSYVAKGKEYRIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X7</accession>
    <name>E3E4X7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_15095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the asp23 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371778.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02715"/>
    <dbReference type="EnsemblBacteria" id="ADO57185">
        <property type="protein sequence ID" value="ADO57185"/>
        <property type="gene ID" value="PPSC2_15095"/>
    </dbReference>
    <dbReference type="GeneID" id="66576965"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15095"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3222"/>
    <dbReference type="eggNOG" id="COG1302">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120389_0_0_9"/>
    <dbReference type="OMA" id="HTNEFGN"/>
    <dbReference type="OrthoDB" id="1961470at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005531">
        <property type="entry name" value="Asp23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03780">
        <property type="entry name" value="Asp23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="179" mass="19899" checksum="FEADA139B7CA5B7C" modified="2011-01-11" version="1">MAKVMDRLLLFLYSLSIGIISILAILLLSGAIPYVLSIEDERVVWFTSLIIAGVLLLLSLRVFYISIRRNQTVQHSIDQRTEYGDIQISVDTIENLCLKAASRFRGMQDLKARVRVLESGLDITIRAIVDGESSIPVLTSEVQKGVHDHVEEITGIPVSNVSVYIANVSQSPSFKSRVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E520</accession>
    <name>E3E520_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_15295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371818.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02920"/>
    <dbReference type="EnsemblBacteria" id="ADO57228">
        <property type="protein sequence ID" value="ADO57228"/>
        <property type="gene ID" value="PPSC2_15295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3268"/>
    <dbReference type="HOGENOM" id="CLU_180015_0_0_9"/>
    <dbReference type="OMA" id="KGCERDI"/>
    <dbReference type="OrthoDB" id="1964495at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="92" mass="10145" checksum="FD01B6B3B36013D0" modified="2011-01-11" version="1">MEDIPVPSTCKGCERDIALSEEQITRILNNMRPKMDCVNDEVYKARLLACAQCDELMSGHTCGISGSIVRIRALAVTQNCPSYHGSRWQGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="77" xmlns="http://uniprot.org/uniprot">
    <accession>E3E525</accession>
    <name>E3E525_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 9">Multifunctional fusion protein</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="9">Peptide methionine sulfoxide reductase MsrA</fullName>
                <shortName evidence="9">Protein-methionine-S-oxide reductase</shortName>
                <ecNumber evidence="9">1.8.4.11</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="9">Peptide-methionine (S)-S-oxide reductase</fullName>
                <shortName evidence="9">Peptide Met(O) reductase</shortName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="8">Peptide methionine sulfoxide reductase MsrB</fullName>
                <ecNumber evidence="8">1.8.4.12</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="8">Peptide-methionine (R)-S-oxide reductase</fullName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">msrA</name>
        <name evidence="8" type="synonym">msrB</name>
        <name evidence="11" type="ORF">PPSC2_15320</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-dithiol + L-methionine (S)-S-oxide</text>
            <dbReference type="Rhea" id="RHEA:19993"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58772"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 8">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(R)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24164"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12314"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:45764"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.12"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 9">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:14217"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the MsrA Met sulfoxide reductase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the MsrB Met sulfoxide reductase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the MsrB Met sulfoxide reductase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">In the N-terminal section; belongs to the MsrA Met sulfoxide reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.11" evidence="9"/>
    <dbReference type="EC" id="1.8.4.12" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371823.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02945"/>
    <dbReference type="EnsemblBacteria" id="ADO57233">
        <property type="protein sequence ID" value="ADO57233"/>
        <property type="gene ID" value="PPSC2_15320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3273"/>
    <dbReference type="eggNOG" id="COG0225">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0229">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031040_1_0_9"/>
    <dbReference type="OMA" id="GGQFNDR"/>
    <dbReference type="OrthoDB" id="1554384at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033744">
        <property type="term" value="F:L-methionine:thioredoxin-disulfide S-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033743">
        <property type="term" value="F:peptide-methionine (R)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008113">
        <property type="term" value="F:peptide-methionine (S)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01401">
        <property type="entry name" value="MsrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01400">
        <property type="entry name" value="MsrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002569">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036509">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028427">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002579">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10173">
        <property type="entry name" value="PTHR10173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01625">
        <property type="entry name" value="PMSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01641">
        <property type="entry name" value="SelR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55068">
        <property type="entry name" value="SSF55068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00401">
        <property type="entry name" value="msrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00357">
        <property type="entry name" value="TIGR00357"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51790">
        <property type="entry name" value="MSRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MsrB" evidence="10">
        <location>
            <begin position="184"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="18"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8">
        <location>
            <position position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="37056" checksum="50AF0A72C190358C" modified="2011-01-11" version="1">MSTNNPNTVEKATFAGGCFWCMVSPFEEMPGILKVRSGYTGGHTENPTYEEVCSETTGHVEAVQITFDPQVFPYEKLLELFWQQIDPTDEGGQFHDRGSSYQTAIFYHNDEQRIKAEASKEALAQSGRFDKPIATSILPAATFYEAEEYHQDYHKKNPAHYKRYRKGSGREDFIEQNWSAKIDKSDLKDRLTPIQYEVTQKNATERPFQNEFWDHEAEGIYVDIVSGEPLFSSLDKYDAGCGWPSFTRPLRSYNVKEKTDLSHFMIRTEVRSREADSHLGHVFDDGPGPEGLRYCINSAALRFVPQEDLEREGYGAYKSLFEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3E534</accession>
    <name>E3E534_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">msmR7</name>
        <name evidence="5" type="ORF">PPSC2_15365</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371832.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03015"/>
    <dbReference type="EnsemblBacteria" id="ADO57242">
        <property type="protein sequence ID" value="ADO57242"/>
        <property type="gene ID" value="PPSC2_15365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3282"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_88_6_9"/>
    <dbReference type="OMA" id="SEEHFIR"/>
    <dbReference type="OrthoDB" id="1785082at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="179"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="279" mass="31701" checksum="3D3A8F82EE804862" modified="2011-01-11" version="1">MGDNMIQFVDTRTSSKHKNITDLILYNCGSEPCSPNQDFGPIARDFNLIHFVLKGRGKLVLDKETYNIEKGQAFLIPANKAAYYQADEYEPWEYSWVGFMGIKSEMYLQNISLVQDNPYVVSIGDITFFHSTILEMLRIGNNTLSSSLAIQGYLCHILAKLVHESGETMPVKEELPYSVQAINYMEKNYNGGIQISEVAEYLGLHPNYLTSVFKQEIGETPKQYLMNIRIKKACELLQDTSYSIQVISNSVGYSDQLTFSRAFKNMMGISPSAYREKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E580</accession>
    <name>E3E580_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Protein kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16310</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372026.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3484"/>
    <dbReference type="EnsemblBacteria" id="ADO57440">
        <property type="protein sequence ID" value="ADO57440"/>
        <property type="gene ID" value="PPSC2_16310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3482"/>
    <dbReference type="eggNOG" id="COG0515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2047378_0_0_9"/>
    <dbReference type="OrthoDB" id="2041901at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="120" mass="13638" checksum="4E780C4D767C1243" modified="2011-01-11" version="1">MIKPYFTKEEVADVLQKGNDDRHNSLIIDFDGTPKLIPFTNDGSKYAVRYETFNAGNGYVGEKSQLNHLNGTYQALLEAWVEYLGYGRRLGSGVYRDYAEYSESIEELQAKAIKLVNSMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5C1</accession>
    <name>E3E5C1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Bifunctional protein PyrR</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="6">Pyrimidine operon regulatory protein</fullName>
            </recommendedName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="6">Uracil phosphoribosyltransferase</fullName>
                <shortName evidence="6">UPRTase</shortName>
                <ecNumber evidence="6">2.4.2.9</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">pyrR</name>
        <name evidence="8" type="ORF">PPSC2_16500</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.</text>
    </comment>
    <comment type="function">
        <text evidence="6">Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil</text>
            <dbReference type="Rhea" id="RHEA:13017"/>
            <dbReference type="ChEBI" id="CHEBI:17568"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.9"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer and homohexamer; in equilibrium.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.9" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372067.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03835"/>
    <dbReference type="EnsemblBacteria" id="ADO57481">
        <property type="protein sequence ID" value="ADO57481"/>
        <property type="gene ID" value="PPSC2_16500"/>
    </dbReference>
    <dbReference type="GeneID" id="66576746"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3522"/>
    <dbReference type="eggNOG" id="COG2065">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094234_2_1_9"/>
    <dbReference type="OMA" id="PIQPDFC"/>
    <dbReference type="OrthoDB" id="1725260at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004845">
        <property type="term" value="F:uracil phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01219">
        <property type="entry name" value="PyrR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023050">
        <property type="entry name" value="PyrR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6 8" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2 6" id="KW-0806">Transcription termination</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="7">
        <location>
            <begin position="13"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="PRPP-binding" evidence="6">
        <location>
            <begin position="104"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="20675" checksum="2395459CC1AFD97E" modified="2011-01-11" version="1">MSNETHVLMDEIAIRRALTRIAHEILEKNKGIDDCVLVGIRTRGVHLAQRLAEKIAEIEGAPIPWGELDVTAYRDDRSSVAEAKGNGKELLMNPADVSVHDKKVILFDDVLYTGRTIRAAMDALMDCGRPQMIQLAVLADRGHRELPIRPDYIGKNIPTSKSEEIVVALQETDGKDEVTIIQNRGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5R4</accession>
    <name>E3E5R4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Serine protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">bprF2</name>
        <name evidence="9" type="ORF">PPSC2_18605</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57941.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05825"/>
    <dbReference type="EnsemblBacteria" id="ADO57941">
        <property type="protein sequence ID" value="ADO57941"/>
        <property type="gene ID" value="PPSC2_18605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3986"/>
    <dbReference type="eggNOG" id="COG1404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_011263_7_3_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="SSF52743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 9" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0720">Serine protease</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168011" evidence="6">
        <location>
            <begin position="29"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="domain" description="Inhibitor I9" evidence="8">
        <location>
            <begin position="60"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S8" evidence="7">
        <location>
            <begin position="243"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="173"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="293"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57941.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="540" mass="57309" checksum="1946B97B574072AA" modified="2015-05-27" version="2">MKSKNIKKTLSVGFTAILAFSLISPVYGDSSTTSSAGASTISAKVSAKLNQQFSTSEYVTYLVKLKDQVDTESVAKHAFQKASAEQISPAAAKLSVRKTVVNSLMDTAEKTQQSVEEYLKKEVNNGNVKKYKSYFIVNAFAVTSTKEVMDNLATLPEIDKILPDEKRELQKVEIDKDAQPVGEQSTADQAVADQTAVDPAVTEENAQKSVQESVYKDAVTPSRVEWNISKIKAPQVWAKGIDGKGIVVANLDTGVEYTHPALKRKWRGLNASGQVVNPELSWYDAVNGASLPTDSNGHGTHTMGTSVGSDSNGTNEIGVAPGAKWIAVRVFNPDTTDSILLDGGQWILAPVDKNGKKHPELAPDVVNNSWGGGPGLDEWYRPVTKAWRAAQIFPEFSAGNTTLSNPGGPGSVANPANLPEAYATGATDINNKLASFSLRGPSPYGEVKPEISAPGVNIRSSVPGGVYEGGWNGTSMAGPHTAGLAALLLQAKPSLTVDQLEDVISKTATPLTDSQYRTSPNNGYGYGLIDALAAVNSVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Z2</accession>
    <name>E3E5Z2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Multidrug ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_19935</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372783.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07155"/>
    <dbReference type="EnsemblBacteria" id="ADO58211">
        <property type="protein sequence ID" value="ADO58211"/>
        <property type="gene ID" value="PPSC2_19935"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19935"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4248"/>
    <dbReference type="eggNOG" id="COG4586">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="LIWDIPP"/>
    <dbReference type="OrthoDB" id="1926714at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="24"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="57"/>
            <end position="64"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="330" mass="37539" checksum="34CBEBB099714C7D" modified="2011-01-11" version="1">MPSITLNQLSKTFTYYKKEPGVRKSLQNLFKREQLTKKAVQNVSFSIEEGEIVGFLGPNGAGKTTTLKMLSGILHPTEGEASVLGFTPWKRQKEFKRQFSIVMGQKNQLWWDLPASESFELNKLIYEIDDNRYKEALDELVTLLGVEEQLHVQVRRLSLGERMKMELIAALLHRPRVILLDEPTIGLDLVSQRRIREFFKAYNRTHRTTILLTSHYMKDIEDLCTRSIIISGGRLVYDGDLHKVNEVIGARKLLKVRLENPVSNLTLASLGKLRSNSELEAVFELDAEDTLAWSKKILDALPVVDFTIEDVPLEEGIANLYDGGRLADAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5Z8</accession>
    <name>E3E5Z8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ybbH</name>
        <name evidence="3" type="ORF">PPSC2_19965</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372789.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07185"/>
    <dbReference type="EnsemblBacteria" id="ADO58217">
        <property type="protein sequence ID" value="ADO58217"/>
        <property type="gene ID" value="PPSC2_19965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4254"/>
    <dbReference type="eggNOG" id="COG1737">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055769_0_0_9"/>
    <dbReference type="OMA" id="QDLEHAP"/>
    <dbReference type="OrthoDB" id="992687at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05013">
        <property type="entry name" value="SIS_RpiR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000281">
        <property type="entry name" value="HTH_RpiR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035472">
        <property type="entry name" value="RpiR-like_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01418">
        <property type="entry name" value="HTH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51071">
        <property type="entry name" value="HTH_RPIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH rpiR-type" evidence="1">
        <location>
            <begin position="2"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="125"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="31396" checksum="4B53081363F8E730" modified="2011-01-11" version="1">MSPILHTLSHRLEQLPVQERKLAESILQAPEDVLHLGIRELSERCGVSAATVTRFCKSLHFKGYPDFKMKLAAELSHSNLTGEESYQDIVAGNSLSRIVQAIQANHTASIADTTRLLDLGKLEQAIAWLSATSRIDLYGMATSSIVAQDFYQKLIRIGKNSTAFADSHMQITSASSLGAEDVAFAVSYSGETQETIAALRCAKEQGAKTLSLTSFGNNTLASLADIALFSSSLEEGMRRGDMASRIAQLHIIDILFTGMVSTNFDKYIPRLEGSYQQVSKLKKQPGGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E625</accession>
    <name>E3E625_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Parallel beta-helix repeat-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ywoF</name>
        <name evidence="3" type="ORF">PPSC2_12840</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371314.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00485"/>
    <dbReference type="CAZy" id="PL9">
        <property type="family name" value="Polysaccharide Lyase Family 9"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56710">
        <property type="protein sequence ID" value="ADO56710"/>
        <property type="gene ID" value="PPSC2_12840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2733"/>
    <dbReference type="eggNOG" id="COG3420">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026896_0_0_9"/>
    <dbReference type="OMA" id="GIDLIGY"/>
    <dbReference type="OrthoDB" id="1177619at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168851" evidence="1">
        <location>
            <begin position="31"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="domain" description="Beta_helix" evidence="2">
        <location>
            <begin position="148"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="509" mass="53794" checksum="BE87C7D0E1E2FF04" modified="2011-01-11" version="1">MKKFGKILLIGLSLGLGLAIGNVQTPAASAAGTEYYVATSGSDSNAGTSDAPWKTLQHAADTVPPGSKVYVRGGVYKEKLKITRSGSASQGPTVFASYGTETAIVDGTGLSVSGNEGLIELADVDYVTIQGFEIRNFTTASKNAVPTGIYVHGAGGFINLSDNKIHDIKNTATPTGKDRLGRDAHGIAVYGTKAPASIHNLTINGNELYNLVLGSSESLVLNGNVNGFAVTSNLIHDNDNIGIDLIGFEGTAPTTAYDQVRNGVVKGNRVYNNSVRNNPSYKSDDNSAGGIYVDGGKDNIIEQNYSYNNDIGVEIASEHAGKTTSNITVRSNVIYNNRLTGIAMGGYDDERGSTVNSKIVNNTLYKNDTLDDGSGQLLVQYDTRNNVIKNNIFVASSTDVLIYNGYTQNSGNVVDYNLYFAPGGSSGANWTWKDKEYTGFPTYKSGTGNDAHSLFADPKFVNATNGDFRLQSSSLAIDSGSTDNAIIGTEDIDGEPRVKGKAVNIGADE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E651</accession>
    <name>E3E651_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Multidrug ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yycF1</name>
        <name evidence="8" type="ORF">PPSC2_12975</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371340.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00650"/>
    <dbReference type="EnsemblBacteria" id="ADO56736">
        <property type="protein sequence ID" value="ADO56736"/>
        <property type="gene ID" value="PPSC2_12975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2764"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_3_9"/>
    <dbReference type="OMA" id="SEYEICK"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="3"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="123"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="123"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="24533" checksum="F8F6BD6981923CA6" modified="2011-01-11" version="1">MANLLAVDDEPAVLALLQNILQKDGHVVTVVSTSPQVLTMQLGAFDLILLDVMMPNMDGFTLCREIRSKVDCPILFLTAKSMENDVMLGLGEGADDYIVKPFGAGELRARINAHLRRENRERRNVFCIGEVHFNLSGKEITVQNVVIPFTKSEYEICKFLALNWGQVFSKEQIYEAVFGFDGDSDSATIVEHIKNIRAKLGKVEVSPVETVWGIGYRWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6W7</accession>
    <name>E3E6W7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lanthionine synthetase c</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lcnDR2</name>
        <name evidence="2" type="ORF">PPSC2_21430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373087.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4570"/>
    <dbReference type="EnsemblBacteria" id="ADO58519">
        <property type="protein sequence ID" value="ADO58519"/>
        <property type="gene ID" value="PPSC2_21430"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21430"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4556"/>
    <dbReference type="eggNOG" id="COG4403">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009398_1_1_9"/>
    <dbReference type="OMA" id="MIAWCHG"/>
    <dbReference type="OrthoDB" id="50133at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd04792">
        <property type="entry name" value="LanM-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007822">
        <property type="entry name" value="LANC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025410">
        <property type="entry name" value="Lant_dehyd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017146">
        <property type="entry name" value="Lanti_2_LanM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13575">
        <property type="entry name" value="DUF4135"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05147">
        <property type="entry name" value="LANC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037228">
        <property type="entry name" value="Lant_mod_RumM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01950">
        <property type="entry name" value="LANCSUPER"/>
    </dbReference>
    <dbReference type="SMART" id="SM01260">
        <property type="entry name" value="LANC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03897">
        <property type="entry name" value="lanti_2_LanM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4135" evidence="1">
        <location>
            <begin position="218"/>
            <end position="585"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1076" mass="122343" checksum="0FA85E9B414AB9E2" modified="2011-01-11" version="1">MKEQIMRALFLQERKNLFDQAFQDFNYKNWKQDKEKTTELIDEWFKFALISTESKKEARFKALSMNEEIFGALIQSTENLKWDENYLTVIKEYQADWFQVLEEALKMNENQPVLQNESRTMDILVRPFIIWSRNQLKQHLCNIDNTQDFILHESTINSVLHTLSFQLTQIAGRSFVLELNIAKALGELEGLTPEERFISFIEKKFVGHKQLVSFFSEYAVIARTLAERTMLFVNVTKETLDRYLLNRSMIIDTFSLHSSELIRIDAGFGDSHQQGRTVMRLYLANGQSFMYKPKPLDISLHFQELIQWFNDKGFSPFLQRNSVIALDGYGYEKFIEAKPCKTEEEIQCFYTRLGALLAIIYVLDGTDFHFENLIAFGEHPMLIDLETLFHNQVYHNVPDSADIEAQFKICNSPLGTSLLPILFHQDDKGFGLELSGVNGERQMTPYPVLSLVDVNTDNMRYIRKSQSTSTGNNRPSLEGEFKNAGDYTAEIVNGFQSLCSMLLQYKMDLLVPTSPLFSFNNTPVRIVLRSTQFYTNFLLESRHPDYGRDALNQENLLDRIWFSWLDDRIISSELQDLRAGDIPYFIGTPNSLDLWDSYGRCIKDVFTRTSMSIVEDRLRSLSTDSISLYSDWISSSIAGSSLGKHVHKVHAPSQNEKVMTSDYSPKPLHSENFLETAKILGDELIEKSVFSQSKRYVTWIGMNLNYRGQLYLSALSPGLYDGTAGIALFLAYLGKISKEEKYTNIALAALETTLSKIPVHLKFPSAFYGQASLLYTLSHFESLLGFNDAWSKRKLDIISNLEDSIDEDTFFDLLGGSAGVIHVLLNEYSLTKSVKTLEVATQYGEHLLKHGEKNNEMISWTSSVSPTPYVGFGHGSTGIASALFRLAAVTKNNCYYATAEKAFAHLTESYSPNYFNWIDQDIKENHDLANWCHGASGIGIGLTLCMPYLNSSLIPDIVQNIEIAVNTTLKYGFNKSHCICHGSLGNIELLILAGQALNRPEWVAEAKKQGNIALSYFFEHSKFKTGLPTALDSQGLWLGLSGIGYQFMRLHSLTSLPSILSLQEPLYKESSCTKRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E713</accession>
    <name>E3E713_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8 11">50S ribosomal protein L22</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">rplV</name>
        <name evidence="12" type="ORF">PPSC2_22410</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="7">This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="8 11">This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8 10">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 9">Belongs to the universal ribosomal protein uL22 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432578.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09875"/>
    <dbReference type="EnsemblBacteria" id="ADO58715">
        <property type="protein sequence ID" value="ADO58715"/>
        <property type="gene ID" value="PPSC2_22410"/>
    </dbReference>
    <dbReference type="GeneID" id="66575585"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4751"/>
    <dbReference type="eggNOG" id="COG0091">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083987_3_3_9"/>
    <dbReference type="OMA" id="KRIQPRA"/>
    <dbReference type="OrthoDB" id="1666043at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00336">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01331_B">
        <property type="entry name" value="Ribosomal_L22_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001063">
        <property type="entry name" value="Ribosomal_L22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018260">
        <property type="entry name" value="Ribosomal_L22/L17_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036394">
        <property type="entry name" value="Ribosomal_L22/L17_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005727">
        <property type="entry name" value="Ribosomal_L22_bac/chlpt-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13501">
        <property type="entry name" value="PTHR13501"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00237">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54843">
        <property type="entry name" value="SSF54843"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01044">
        <property type="entry name" value="rplV_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00464">
        <property type="entry name" value="RIBOSOMAL_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 8 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 8 10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8 10" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="12183" checksum="9FEC9803ED3F48D7" modified="2011-01-11" version="1">MEAKAHAKSVRISARKVKLVIDLIRGKQVGEAIAILRHTPKSASPVVEKLLNSAIANADHNYSMDVNKLVVSEVFVNQGPTMKRFRPRAMGRASRINKRTSHITLVVSEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E718</accession>
    <name>E3E718_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 7">50S ribosomal protein L3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">rplC</name>
        <name evidence="9" type="ORF">PPSC2_22435</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 7">One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 7">Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013312161.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09900"/>
    <dbReference type="EnsemblBacteria" id="ADO58720">
        <property type="protein sequence ID" value="ADO58720"/>
        <property type="gene ID" value="PPSC2_22435"/>
    </dbReference>
    <dbReference type="GeneID" id="66575580"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4756"/>
    <dbReference type="eggNOG" id="COG0087">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044142_4_1_9"/>
    <dbReference type="OMA" id="KRMAGRY"/>
    <dbReference type="OrthoDB" id="1270636at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01325_B">
        <property type="entry name" value="Ribosomal_L3_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000597">
        <property type="entry name" value="Ribosomal_L3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019927">
        <property type="entry name" value="Ribosomal_L3_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019926">
        <property type="entry name" value="Ribosomal_L3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11229">
        <property type="entry name" value="PTHR11229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00297">
        <property type="entry name" value="Ribosomal_L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03625">
        <property type="entry name" value="L3_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00474">
        <property type="entry name" value="RIBOSOMAL_L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="22525" checksum="6FDFD5C2106DEB18" modified="2011-01-11" version="1">MKGILGKKLGMTQVFTPEGNVLAVTVIEAGPCVVLQKKDLENDGYEAIQLGFSDKKEKRSNKPEAGHAKKANTAPKRYVRELRGIDLAAYEVGQELKADVFTEGEFVDVTGISKGKGFAGVIKRWGQSRGPMAHGSRYHRGPGSMGSIQANRVPKGKHLPGHMGHETVTIQRLEVVKIDTERNVLLVKGSIPGPKNSFVKVLETVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7M6</accession>
    <name>E3E7M6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YocH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yocH</name>
        <name evidence="3" type="ORF">PPSC2_13435</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371434.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01120"/>
    <dbReference type="CAZy" id="CBM50">
        <property type="family name" value="Carbohydrate-Binding Module Family 50"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56831">
        <property type="protein sequence ID" value="ADO56831"/>
        <property type="gene ID" value="PPSC2_13435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2861"/>
    <dbReference type="eggNOG" id="COG3584">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1265923_0_0_9"/>
    <dbReference type="OMA" id="AYTANCK"/>
    <dbReference type="OrthoDB" id="2027419at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009254">
        <property type="term" value="P:peptidoglycan turnover"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010611">
        <property type="entry name" value="3D_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06725">
        <property type="entry name" value="3D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="SSF50685"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168045" evidence="1">
        <location>
            <begin position="33"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="2">
        <location>
            <begin position="34"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="222" mass="23695" checksum="38385EE4A8755B61" modified="2011-01-11" version="1">MKHLKHIGQTMKFAVLAAAIAGLAQTAGVADAASLHTAKEGDTFFLLAQRYGVSVDELTKANPDIASNNIYAGLQIKVPDEKSVKAASDSKPQLLTEKAPANEKPTIEAWGKTFNYSKVVDVKATAYSAAADENGKWGAVDYYGNPLKLGTIAVDPKVIPMGTKVLVTGYSHPGLPDHSFVAVARDQGSAITGKRIDIFIPGNKSFVNDFGFQNVKLYVIDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R2</accession>
    <name>E3E7R2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Penicillin-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pbpF</name>
        <name evidence="10" type="ORF">PPSC2_13955</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>[GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-di-trans,octa-cis-undecaprenyl diphosphate + beta-D-GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate = [GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-di-trans-octa-cis-undecaprenyl diphosphate + di-trans,octa-cis-undecaprenyl diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23708"/>
            <dbReference type="Rhea" id="RHEA-COMP:9602"/>
            <dbReference type="Rhea" id="RHEA-COMP:9603"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60033"/>
            <dbReference type="ChEBI" id="CHEBI:78435"/>
            <dbReference type="EC" id="2.4.1.129"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371545.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01610"/>
    <dbReference type="CAZy" id="GT51">
        <property type="family name" value="Glycosyltransferase Family 51"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56945">
        <property type="protein sequence ID" value="ADO56945"/>
        <property type="gene ID" value="PPSC2_13955"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13955"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2981"/>
    <dbReference type="eggNOG" id="COG0744">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006354_2_5_9"/>
    <dbReference type="OMA" id="AWYMTEM"/>
    <dbReference type="OrthoDB" id="652304at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00063">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003961">
        <property type="entry name" value="FN3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036116">
        <property type="entry name" value="FN3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001264">
        <property type="entry name" value="Glyco_trans_51"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00912">
        <property type="entry name" value="Transgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49265">
        <property type="entry name" value="SSF49265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50853">
        <property type="entry name" value="FN3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type-III" evidence="9">
        <location>
            <begin position="660"/>
            <end position="751"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="636"/>
            <end position="668"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="751"/>
            <end position="886"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="757"/>
            <end position="878"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="886" mass="96184" checksum="45B96AA81BF4800C" modified="2011-01-11" version="1">MPNDSLSRSGNRNRNTSKEKPKGKKKKITGKRVGWTLFITAALAIFCALGGYLFVMVNGEKIYKANKDKITVNETSKVYDRNGVLMGELSVQKSDPVKSEEIPPLLKKAFIATEDKRFMEHQGVDIWSIGRAAVKDIVARSAVEGGSTLTQQLAKNLFLTRDKTFFRKATEVSIAMALERNLTKDEIITLYLNRIWFGRSYSGIKAASEGYFGVSDLNELKLWQVATLAAIPKGPSKYNPISNPENSKARRAVVLQLMFEQGMIGKQEMEEAKAINYDYKQPEKVQKYQNFMEYVMDEAEDALPGVSGNDLIIGGYKIHTTMDAQAQNALDQAMADDDMFEKSPDDQPVQASMVIINNQTGGIAAMAPGRDYKKGTFNRATQSRRQPGSAFKPLVAYAPALESGKFTIDTPLSNERQSFNGYSPKNLHGYSSTISMIDAITKSENIPPVWLLNQIGVEKGVQFAESVGIPMDKNDHSLAIALGGLSKGTNTLEMAQAYSAFANKGQFQKAYSIKQINNSDDQVVYTHNEESKSVMSEKTAYEMTKMMQNVVNSGTGRKARIDWPVAGKTGTTQSGISGNSGNRDIWFVGYTPEYTGAVWMGYDKPDSKHMLRNYSGQSAAFFGRVMGEALKGHPVTQFSEPKGYEPPVEEKPEEPVQATAPSGLSGSYSQDTQIVSLSWNAAEGDNVQYRVYRKESSEGSFRTIMEAMRGTSGEDTSPVAGKTYQYYVVAYGADGKESAASNTISVEIPAETTPIDPQPGNDPNQDETVPDNGENIDGQNGTDQGNTIPGGTDNGTGTDQVPTSPGGNNGNGTGGTGNSNDNFGNGNDTNTGNGQTTTPDSGITDENTMTNPENTDASTTGAIMDGSQEGTSNGHSNSNRGRHNRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7R7</accession>
    <name>E3E7R7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DNA mismatch repair protein MutS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mutS</name>
        <name evidence="10" type="synonym">mutS3</name>
        <name evidence="10" type="ORF">PPSC2_13980</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the DNA mismatch repair MutS family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56950.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886123.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01635"/>
    <dbReference type="EnsemblBacteria" id="ADO56950">
        <property type="protein sequence ID" value="ADO56950"/>
        <property type="gene ID" value="PPSC2_13980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2986"/>
    <dbReference type="eggNOG" id="COG0249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002472_1_3_9"/>
    <dbReference type="OrthoDB" id="15991at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00096">
        <property type="entry name" value="MutS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005748">
        <property type="entry name" value="DNA_mismatch_repair_MutS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007695">
        <property type="entry name" value="DNA_mismatch_repair_MutS-lik_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017261">
        <property type="entry name" value="DNA_mismatch_repair_MutS/MSH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007861">
        <property type="entry name" value="DNA_mismatch_repair_MutS_clamp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007696">
        <property type="entry name" value="DNA_mismatch_repair_MutS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016151">
        <property type="entry name" value="DNA_mismatch_repair_MutS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036187">
        <property type="entry name" value="DNA_mismatch_repair_MutS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007860">
        <property type="entry name" value="DNA_mmatch_repair_MutS_con_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036678">
        <property type="entry name" value="MutS_con_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS_family"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="PTHR11361"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01624">
        <property type="entry name" value="MutS_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05188">
        <property type="entry name" value="MutS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05192">
        <property type="entry name" value="MutS_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05190">
        <property type="entry name" value="MutS_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037677">
        <property type="entry name" value="DNA_mis_repair_Msh6"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00534">
        <property type="entry name" value="MUTSac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00533">
        <property type="entry name" value="MUTSd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48334">
        <property type="entry name" value="SSF48334"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53150">
        <property type="entry name" value="SSF53150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55271">
        <property type="entry name" value="SSF55271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01070">
        <property type="entry name" value="mutS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00486">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 7 8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 7 8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 7 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_MISMATCH_REPAIR_2" evidence="9">
        <location>
            <begin position="685"/>
            <end position="701"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="611"/>
            <end position="618"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS00486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56950.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="939" mass="104579" checksum="50A8C8EBF9DB8215" modified="2015-05-27" version="2">MSKYTPMIEQYLSIKEQAKDAFLFFRLGDFYEMFFDDAILASKELEITLTGREGGAAEKIPMCGVPYHSAENYIQRLIEKGYKVAICEQMEEASATKGMVRRDIVRVVTPGTVMEGKVLGDKSNNYMVCVTETDGMLALAACDLSTGELYVTSVPDSKEWLLDEINIYEPSEMLGDGHLLDFVTSRMSPVGRRVVYTAWDKSKDDLVRDQFGEATWARLTEERRRCVSRLISYLNETQKRSLGQLTQISVYEPNHFMILDPFTRRNLELVETVRERSKKGSLLWLLDRTETSMGARLLRRWIDKPLLSSNLIEERLEAVDKLYHQFIFREDVRAQLKEIYDLERLVGRIAFGSANARDLIALKLSLAQIPSLRELCAESPSNTLRRIAQTLDSCADLCTLIEEAVADEPPISVRDGGLIKEGYHQRLDELREASVNGKRWIAELEAKERVATGIRSLKIGYNKVFGYYIEVTKSNLASLPEGRYERKQTLANAERYITPELKEKESLILEAEDKMVDLEYTLFSELRSKLNAEIPRLQKLAEQVAEIDVYQSLATVSAERGFVKPELTTGYDFVVEQGRHPVVEAVMKDGGFIANNTVLEEADAHILLITGPNMAGKSTYMRQVALIAIMAQIGCFVPAARAKVPMLDRIFTRIGAADDLIGGQSTFMVEMADIQVMTDKATPRSLIIIDELGRGTSTSEGMAIAQAVIEFVHDTIGCKALVSTHFHELAHLEQGLTSLRNYSMAVQESGDKVNFLRKLIPGAASSSYGIYCARLAGLPNNIIERANGLLYGFEQAAAQVTAGTETARGAKEGTDLRTVPGTEEISPMSAKYADQTLRANGETAPPVQSGSQQATLVKEDTLQIVEDSGELEHAASDVVQLSIFGEQDLAPSKPHSETVEANPIVRQILRKVKNADVMNMTPLQAMQLLNELKNKANGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7U4</accession>
    <name>E3E7U4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371577.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01770"/>
    <dbReference type="EnsemblBacteria" id="ADO56977">
        <property type="protein sequence ID" value="ADO56977"/>
        <property type="gene ID" value="PPSC2_14115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3013"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_7_9"/>
    <dbReference type="OMA" id="AMWMERV"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="161" mass="18595" checksum="169D35A8D38A6B51" modified="2011-01-11" version="1">MSDREEDRLEVYRIIQSVREVNKTIFYAFWNEEQHLDLTAMQHMALAILNKRPNIGLSELAEIAHVGSSSMSGVVDRLTKAGYIARGRHEHDRRSLVLTLTPEGKDIMQKVDAMWMERVLPILDIPKEQLELLLDVHKQMIMKLTPKGMNQLEQSSNDTTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8K1</accession>
    <name>E3E8K1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0178 protein PPSC2_16820</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yqxD</name>
        <name evidence="3" type="ORF">PPSC2_16820</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0178 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57550.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04155"/>
    <dbReference type="EnsemblBacteria" id="ADO57550">
        <property type="protein sequence ID" value="ADO57550"/>
        <property type="gene ID" value="PPSC2_16820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3589"/>
    <dbReference type="eggNOG" id="COG1671">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106619_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00489">
        <property type="entry name" value="UPF0178"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003791">
        <property type="entry name" value="UPF0178"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35146">
        <property type="entry name" value="PTHR35146"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02639">
        <property type="entry name" value="DUF188"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57550.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="160" mass="17935" checksum="7BB9661D166C0092" modified="2015-05-27" version="2">MLMGGSGNFPDVRIVVDGDACPVKSEIAETASRFHIDVIMVSSYDHLIQGSKGVSVVKVDRSDQSADLYIANHIRRGDIVTTNDYGLAALALAKGCEVMSFRGTMYRNDSIDFMLDRRHTSAKERKKGRYGKGPKPFTLEDREVFQHKLTKLLLRLQENE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8P2</accession>
    <name>E3E8P2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">xerD3</name>
        <name evidence="4" type="ORF">PPSC2_17750</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372331.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05030"/>
    <dbReference type="EnsemblBacteria" id="ADO57751">
        <property type="protein sequence ID" value="ADO57751"/>
        <property type="gene ID" value="PPSC2_17750"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17750"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3794"/>
    <dbReference type="eggNOG" id="COG4974">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027562_39_2_9"/>
    <dbReference type="OMA" id="TERCTHV"/>
    <dbReference type="OrthoDB" id="745068at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16915" checksum="5C09E8A379AFE45A" modified="2011-01-11" version="1">MVRLRLEDCDRERKVLKVRQGKGRKDRQTLLSEAAFAVVEQYIGWEQPADWLFPGQREGRHLTERSAQKVFEKALAEAGIRKQVSIHSLRHSFATHLLENGIDLRYIQELLGHQSVRTTERCTHVSRRDIGRIQSPLDRMSELED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8X4</accession>
    <name>E3E8X4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Queuine tRNA-ribosyltransferase</fullName>
            <ecNumber evidence="4">2.4.2.29</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Guanine insertion enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">tRNA-guanine transglycosylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">tgt</name>
        <name evidence="6" type="ORF">PPSC2_19205</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>7-aminomethyl-7-carbaguanine + guanosine(34) in tRNA = 7-aminomethyl-7-carbaguanosine(34) in tRNA + guanine</text>
            <dbReference type="Rhea" id="RHEA:24104"/>
            <dbReference type="Rhea" id="RHEA-COMP:10341"/>
            <dbReference type="Rhea" id="RHEA-COMP:10342"/>
            <dbReference type="ChEBI" id="CHEBI:16235"/>
            <dbReference type="ChEBI" id="CHEBI:58703"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="ChEBI" id="CHEBI:82833"/>
            <dbReference type="EC" id="2.4.2.29"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">tRNA modification; tRNA-queuosine biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the queuine tRNA-ribosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.29" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372647.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06405"/>
    <dbReference type="EnsemblBacteria" id="ADO58072">
        <property type="protein sequence ID" value="ADO58072"/>
        <property type="gene ID" value="PPSC2_19205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4114"/>
    <dbReference type="eggNOG" id="COG0343">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022060_0_1_9"/>
    <dbReference type="OMA" id="GIDLFDC"/>
    <dbReference type="OrthoDB" id="1165356at2"/>
    <dbReference type="UniPathway" id="UPA00392"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008479">
        <property type="term" value="F:queuine tRNA-ribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0101030">
        <property type="term" value="P:tRNA-guanine transglycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.105">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00168">
        <property type="entry name" value="Q_tRNA_Tgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004803">
        <property type="entry name" value="TGT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036511">
        <property type="entry name" value="TGT-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002616">
        <property type="entry name" value="tRNA_ribo_trans-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01702">
        <property type="entry name" value="TGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51713">
        <property type="entry name" value="SSF51713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00430">
        <property type="entry name" value="Q_tRNA_tgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00449">
        <property type="entry name" value="tgt_general"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 4" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="TGT" evidence="5">
        <location>
            <begin position="17"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="95"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="RNA binding" evidence="4">
        <location>
            <begin position="250"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="RNA binding; important for wobble base 34 recognition" evidence="4">
        <location>
            <begin position="274"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="219"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="307"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="309"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="312"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="338"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="379" mass="42937" checksum="DD831A0201EA23CE" modified="2011-01-11" version="1">MAPAIRYEHIKTCKQSGARLGRVHTPHGVIETPTFMPVGTQATVKTMSPEELKAMDAHIILSNTYHLFLRPGHDIIREAGGLHKFMNWDRPILTDSGGFQVFSLSEMRKISEEGVHFRSHLNGDKKFLSPEVAMEVQNSLGSDIMMAFDECPPFPAEYEYVKKSLERTSRWAERCLEAHARPHDQGLFAIVQGGMHEDLRKQSAADLTSMDFPGYAIGGLSVGEPKHLMYEVLDYTVPLLPTNKPRYLMGVGSPDALIEGSIRGVDMFDCVLPTRIARNGTTMTSQGRLVVRNANYASDFGPLDPACDCYTCRNYSRAYLRHLIKADETFGLRLTTYHNLHFLIQLMRNVRQAIMDDRLLDFRDEFFEQYGLHDNDKGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E994</accession>
    <name>E3E994_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Asparagine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_15960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371953.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03650"/>
    <dbReference type="EnsemblBacteria" id="ADO57367">
        <property type="protein sequence ID" value="ADO57367"/>
        <property type="gene ID" value="PPSC2_15960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3409"/>
    <dbReference type="eggNOG" id="ENOG5033A5P">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_207061_0_0_9"/>
    <dbReference type="OMA" id="MREGLIP"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="52" mass="5334" checksum="DB0D77245D9F6BF9" modified="2011-01-11" version="1">MREGMIPTVLGTVVSASGAVLLSSKYKLAATGILGFGLAHVVLGAIDLIEHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9C6</accession>
    <name>E3E9C6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371985.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57399">
        <property type="protein sequence ID" value="ADO57399"/>
        <property type="gene ID" value="PPSC2_16105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3441"/>
    <dbReference type="eggNOG" id="ENOG50310MW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_996628_0_0_9"/>
    <dbReference type="OMA" id="DDIIHVV"/>
    <dbReference type="OrthoDB" id="1544117at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168727" evidence="1">
        <location>
            <begin position="25"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="265" mass="30346" checksum="E6D563BD0D24CCA6" modified="2011-01-11" version="1">MKNKTFFSLLCAFIISIMGLTACGVSSSKDHSLLSKEEFEQMYVNADQFEDRSINFYGQITYGPKENRNGIYVQVNADPKNNEKNTFVYGDSFSSFSNVKENDFIHVTGTVIEKYRYRTTHGNYTSAPAIAANKIEKSMFIDPTLSTIEVNKSVKQKGYIMTLQKVEFAEEETRIYMAIENRSTSTINYYDFYTKLVQGNKQYEPTFDRVSYTYPELQSEILPGVKTEGILTFSKIDSSKDLTLIAKGSSEELEYNPFKFKISKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9G9</accession>
    <name>E3E9G9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Elongation factor 4</fullName>
            <shortName evidence="6">EF-4</shortName>
            <ecNumber evidence="6">3.6.5.n1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Ribosomal back-translocase LepA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">lepA</name>
        <name evidence="8" type="ORF">PPSC2_17040</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>GTP + H2O = GDP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="EC" id="3.6.5.n1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Peripheral membrane protein</topology>
            <orientation evidence="6">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.n1" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372182.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04375"/>
    <dbReference type="EnsemblBacteria" id="ADO57600">
        <property type="protein sequence ID" value="ADO57600"/>
        <property type="gene ID" value="PPSC2_17040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3639"/>
    <dbReference type="eggNOG" id="COG0481">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009995_3_3_9"/>
    <dbReference type="OMA" id="MVQIAIQ"/>
    <dbReference type="OrthoDB" id="182107at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045727">
        <property type="term" value="P:positive regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03709">
        <property type="entry name" value="lepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00071">
        <property type="entry name" value="LepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006297">
        <property type="entry name" value="EF-4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038363">
        <property type="entry name" value="LepA_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013842">
        <property type="entry name" value="LepA_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035654">
        <property type="entry name" value="LepA_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43512">
        <property type="entry name" value="PTHR43512"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06421">
        <property type="entry name" value="LepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01393">
        <property type="entry name" value="lepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="4 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="7">
        <location>
            <begin position="9"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="21"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="138"/>
            <end position="141"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="604" mass="67821" checksum="0855217B20A42E97" modified="2011-01-11" version="1">MTDILARQRKIRNFSIIAHIDHGKSTLADRILEYTGALTSREMQEQVLDQMELERERGITIKLQAVRLTYKADDGEEYILNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTLANVYLALDNNLEILPVLNKIDLPSADPERVKQEIEDVIGLDTSETVHASAKAGIGIKEILEQVVRSVPAPQGNPDNPLKALIFDSHYDPYKGVIVYVRVVDGSIRAGSKIKMMATDKTFEVIEVGAFMPRMTIVDELNIGDVGFIVAGIKHVGDTRVGDTVTDAKNPTPEPMPGYRKINPMVYCGLYPIETSEYNDLREALEKLQLNDASLSFEPETSSALGFGFRCGFLGLLHMDVIQERIEREFNIPLITTAPSVIYRVQLTNGETIEIDNPSNYPEVGRIEHVEEPYVKAGIIVPNDYVGTVMELCQSKRGEYVNMEYLDTTRVTITYQIPLSEIVYDFFDQLKSSTKGYASFDYEISGYRQSNLVKMDILLNGEQVDALSFIVHRDRAYHRGRIICEKLRELIPRQMFEVPIQASVGTKVVARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGNVEVPQEAFMAVLKIDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9H1</accession>
    <name>E3E9H1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stage II sporulation protein P</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoIIP</name>
        <name evidence="3" type="ORF">PPSC2_17050</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372184.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04385"/>
    <dbReference type="EnsemblBacteria" id="ADO57602">
        <property type="protein sequence ID" value="ADO57602"/>
        <property type="gene ID" value="PPSC2_17050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3641"/>
    <dbReference type="eggNOG" id="COG0860">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040895_3_0_9"/>
    <dbReference type="OMA" id="TDYTNMP"/>
    <dbReference type="OrthoDB" id="1416338at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010897">
        <property type="entry name" value="Spore_II_P"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07454">
        <property type="entry name" value="SpoIIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02867">
        <property type="entry name" value="spore_II_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="126"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="201"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="145"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="207"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="419" mass="45889" checksum="605320BC1A8D6036" modified="2011-01-11" version="1">MKKIQTWNVGRWRRKGIEILAMGHTLVLLIMGSALLFVVLGLGGLAENRLQTSPVSSMKGLAGSVSSGFFADMLGMEVPHLAQKKQHSSLSGEQWSPFVFQMLTGINPQDPKSLISREIPGMSAGAPVLLRKGSGNDKVEGPTDYQPDQGTTDTPGGSDAAENPPSTTPDIPTTPETDPAREDDPGDAAKGEKRILIYHSHPREAYNPLLSKTSSNPNSGSKSANVSRVGDFVKKRLEKQGISTLHVNKDYATTVQNYNWNYSYKYSRATVKEVLAQNKGLTYLLDIHRDSQRHGKTTATINGLSYAKVYFIIGHDNKNWRKNEAFAARIHEKLEKSYHGVSRGVWGKDGGKGNNGEYNQSLSSHSILIEIGGIDNTEEELKRTSDVLADMISEVYWEDQKAQKAGTNVSDTKKSNSGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9M0</accession>
    <name>E3E9M0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372232.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3696"/>
    <dbReference type="EnsemblBacteria" id="ADO57651">
        <property type="protein sequence ID" value="ADO57651"/>
        <property type="gene ID" value="PPSC2_17260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3689"/>
    <dbReference type="HOGENOM" id="CLU_2808418_0_0_9"/>
    <dbReference type="OrthoDB" id="2169096at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7575" checksum="9AC35A1A9E0708BF" modified="2011-01-11" version="1">MKLSLSRKANLEGMLIGDQVTIGGPAVEENIRFEVWRNESGFEIKVFDRLGKWPACSRAQVDMYANT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9Q6</accession>
    <name>E3E9Q6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD(P)H nitroreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydgI3</name>
        <name evidence="2" type="ORF">PPSC2_18195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372425.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3894"/>
    <dbReference type="EnsemblBacteria" id="ADO57846">
        <property type="protein sequence ID" value="ADO57846"/>
        <property type="gene ID" value="PPSC2_18195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3887"/>
    <dbReference type="eggNOG" id="COG0778">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070764_4_5_9"/>
    <dbReference type="OMA" id="VNAQPWR"/>
    <dbReference type="OrthoDB" id="1847197at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="20"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="217" mass="24176" checksum="4228A45761297E88" modified="2011-01-11" version="1">MSNTNTSNIVKTNDFKEIALGRRSVKVYDPSVKISREEMTEILTEATRAPSSINLQPWRFLVIDSPEGKATLAPLARFNQRQVETSSAVIAVFGDLNNFDNFEQIFGEAVELGYMPQDIKEMQQEKVTAHFAALDPVVNRETVLIDGGLVSMQLMLVARAHGYDTNAIGGYEKDQIAEAFGLDKDRYVPIMLISMGKGINEGHPSTRLPIDQIAQWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9U3</accession>
    <name>E3E9U3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372462.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3931"/>
    <dbReference type="EnsemblBacteria" id="ADO57883">
        <property type="protein sequence ID" value="ADO57883"/>
        <property type="gene ID" value="PPSC2_18360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3928"/>
    <dbReference type="eggNOG" id="COG1357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052161_0_0_9"/>
    <dbReference type="OMA" id="RINFINC"/>
    <dbReference type="OrthoDB" id="1018137at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="42877" checksum="4F42184ABC41B071" modified="2011-01-11" version="1">MDKQAALHHFKEHHFTPLLDIQLDRLEAMFDRYQAQLISDFKESFRDLCIHILNMQQQGQKEPIGYIHYSFLRTQMLEQSYLYMVEAYSAEWYEDDSDCKLTYDASWAYASMSTMLEALEQERKIYMGTITSVDVERLILESAPLFHQFVNSLLRLGIAEVVQMPEYLAIHKTDRVVIRTGEYKDISENLYVEDQEALLADHVREQLIHSSEEEPYVYENLKRISLPHLHLMQKDLRYNDFSHTDLRESQFHTCILIGSMWQRSNLAGGSFQGCLLTDADFRYSDLRDANFSNASGQPYREHGVRVPGLCGLHFEHAILDGADFTDVHSFEHAYFDGASMQGTLVPQKYYQHWKLSEAQLQSIVWTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9X1</accession>
    <name>E3E9X1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">UDP-N-acetylmuramate--L-alanine ligase</fullName>
            <ecNumber evidence="4 12">6.3.2.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">UDP-N-acetylmuramoyl-L-alanine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 16" type="primary">murC</name>
        <name evidence="16" type="ORF">PPSC2_19425</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Cell wall formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>ATP + L-alanine + UDP-N-acetyl-alpha-D-muramate = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanine</text>
            <dbReference type="Rhea" id="RHEA:23372"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:70757"/>
            <dbReference type="ChEBI" id="CHEBI:83898"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 12">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the MurCDEF family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.8" evidence="4 12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58104.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324656.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06625"/>
    <dbReference type="EnsemblBacteria" id="ADO58104">
        <property type="protein sequence ID" value="ADO58104"/>
        <property type="gene ID" value="PPSC2_19425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4144"/>
    <dbReference type="eggNOG" id="COG0773">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028104_2_2_9"/>
    <dbReference type="OrthoDB" id="307881at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008763">
        <property type="term" value="F:UDP-N-acetylmuramate-L-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00046">
        <property type="entry name" value="MurC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000713">
        <property type="entry name" value="Mur_ligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005758">
        <property type="entry name" value="UDP-N-AcMur_Ala_ligase_MurC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01225">
        <property type="entry name" value="Mur_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01082">
        <property type="entry name" value="murC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 12" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6 12" id="KW-0132">Cell division</keyword>
    <keyword evidence="8 12" id="KW-0133">Cell shape</keyword>
    <keyword evidence="11 12" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 12" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12 16" id="KW-0436">Ligase</keyword>
    <keyword evidence="12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 12" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase" evidence="13">
        <location>
            <begin position="6"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_M" evidence="15">
        <location>
            <begin position="109"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="14">
        <location>
            <begin position="310"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="111"/>
            <end position="117"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO58104.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="459" mass="50107" checksum="4FE72581FFF2F930" modified="2015-05-27" version="2">MITSEHVHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQELTEKLAAKGAKIYIGHTPEHIAGADIVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERKGIAVAGAHGKTTTSSMIALVMERCNVDPTYIIGGEITNLGTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVTNIEADHLENYDGDFNRLKSAYVQFLSQIRPDGAAIVCADDQNIREMLPQLQTRVITYGVEHEADYMATDIQLGDRRLSFTMSRKGTALGTIELSVPGKHNMYNAMATVISCLEAGIPFDQIAATIVEFHGAKRRFQVLGEGNDILIIDDYAHHPTEIEATISAARATGKRIIAVFQPQRYSRTFFLLDAFSRAFSEANEVIITDIYSPAGEKQIAGVHSSKLVDLIVQNSNANAIYLPTKEAVIEELKDRLQPGDLVLTMGAGDIWKAGDALARHLRGQQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9X9</accession>
    <name>E3E9X9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Porphobilinogen deaminase</fullName>
            <shortName evidence="6">PBG</shortName>
            <ecNumber evidence="6">2.5.1.61</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Hydroxymethylbilane synthase</fullName>
            <shortName evidence="6">HMBS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Pre-uroporphyrinogen synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">hemC</name>
        <name evidence="9" type="ORF">PPSC2_19465</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 6">Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>H2O + 4 porphobilinogen = hydroxymethylbilane + 4 NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:13185"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57845"/>
            <dbReference type="ChEBI" id="CHEBI:58126"/>
            <dbReference type="EC" id="2.5.1.61"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>dipyrromethane</name>
            <dbReference type="ChEBI" id="CHEBI:60342"/>
        </cofactor>
        <text evidence="6">Binds 1 dipyrromethane group covalently.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 2/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Monomer.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="6">The porphobilinogen subunits are added to the dipyrromethane group.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the HMBS family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.61" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372685.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06665"/>
    <dbReference type="EnsemblBacteria" id="ADO58112">
        <property type="protein sequence ID" value="ADO58112"/>
        <property type="gene ID" value="PPSC2_19465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4152"/>
    <dbReference type="eggNOG" id="COG0181">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019704_0_2_9"/>
    <dbReference type="OMA" id="LWQANHI"/>
    <dbReference type="OrthoDB" id="1450400at2"/>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00319"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004418">
        <property type="term" value="F:hydroxymethylbilane synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018160">
        <property type="term" value="P:peptidyl-pyrromethane cofactor linkage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00260">
        <property type="entry name" value="Porphobil_deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000860">
        <property type="entry name" value="HemC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022419">
        <property type="entry name" value="Porphobilin_deaminase_cofac_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022417">
        <property type="entry name" value="Porphobilin_deaminase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022418">
        <property type="entry name" value="Porphobilinogen_deaminase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036803">
        <property type="entry name" value="Porphobilinogen_deaminase_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11557">
        <property type="entry name" value="PTHR11557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01379">
        <property type="entry name" value="Porphobil_deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03900">
        <property type="entry name" value="Porphobil_deamC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001438">
        <property type="entry name" value="4pyrrol_synth_OHMeBilane_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00151">
        <property type="entry name" value="PORPHBDMNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54782">
        <property type="entry name" value="SSF54782"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00212">
        <property type="entry name" value="hemC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00533">
        <property type="entry name" value="PORPHOBILINOGEN_DEAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Porphobil_deam" evidence="7">
        <location>
            <begin position="4"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="Porphobil_deamC" evidence="8">
        <location>
            <begin position="229"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="modified residue" description="S-(dipyrrolylmethanemethyl)cysteine" evidence="6">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF03900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="308" mass="32869" checksum="0399F0BB37E188E2" modified="2011-01-11" version="1">MRTIVVGSRQSALALTQTGHVIEDLNALCAEHGLDLQFVIKKILTKGDRILDVTLSKVGGKGLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLEDLPSGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGWKDRITSYIPEEACLPAVGQGALGIECRASDEELLALLRLYNHQDTSATVEAERTFLGVLNGGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGNDPQKLGEAVAASLIAKGAEQILAQVRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA07</accession>
    <name>E3EA07_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PPSC2_19600</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; Fe-Mo cofactor biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the radical SAM superfamily. NifB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372712.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06820"/>
    <dbReference type="EnsemblBacteria" id="ADO58140">
        <property type="protein sequence ID" value="ADO58140"/>
        <property type="gene ID" value="PPSC2_19600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4179"/>
    <dbReference type="eggNOG" id="COG0641">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_3_1_9"/>
    <dbReference type="OMA" id="PYKGTMK"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="UniPathway" id="UPA00782"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023885">
        <property type="entry name" value="4Fe4S-binding_SPASM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005980">
        <property type="entry name" value="Nase_CF_NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023867">
        <property type="entry name" value="Sulphatase_maturase_rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43787:SF3">
        <property type="entry name" value="PTHR43787:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01384">
        <property type="entry name" value="thioether_bond_formation_requi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04085">
        <property type="entry name" value="rSAM_more_4Fe4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="10">
        <location>
            <begin position="85"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="442" mass="50609" checksum="571E4489F5524744" modified="2011-01-11" version="1">MKASQYNFIFNDIIENTDKTVLYNSRTGALAVLEPEYYKQFCELTNNGLAINNDTYLKNLIECGYIVEDNMNEKAYVKVNLLKNRFESSNLMLTIAPTMACNFRCVYCFEKDQYHNKTMSEETAQSIVNFVKTNASKLDTLNVTWYGGEPLIAMKQIVRISEDFLEICKENNIQYTASVITNGYLLNKEKVQTLISCGVNDIQVTVDGPKEVHDLRRPLVSGRGTFDVIMNNLKQIKGMIKIFMRINTDQDNWLNLHEIVGFLKENSLLENVIPYLGLVTPTNGKYEGTKCLTDEMYSKFNLKFMSENDIPISYIYPAPKGNYCSADKYNSFVIDPLGHLYKCWSDIGIIEQCVGIINEDTSVKWNTELLGCYLLYDPTEDEKCSDCKYLPVCLGGCPHNRMADFNICEQYRYNLQEYITECTKVLLAGQLTENKKEVSESC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAC9</accession>
    <name>E3EAC9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LplB15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lplB15</name>
        <name evidence="3" type="ORF">PPSC2_21560</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373114.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08755"/>
    <dbReference type="EnsemblBacteria" id="ADO58547">
        <property type="protein sequence ID" value="ADO58547"/>
        <property type="gene ID" value="PPSC2_21560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4584"/>
    <dbReference type="eggNOG" id="COG4633">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_131523_0_0_9"/>
    <dbReference type="OMA" id="HGKVIVK"/>
    <dbReference type="OrthoDB" id="1654242at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028096">
        <property type="entry name" value="EfeO_Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13473">
        <property type="entry name" value="Cupredoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="Cupredoxin_1" evidence="2">
        <location>
            <begin position="45"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="138" mass="15705" checksum="C2B421004CABBD17" modified="2011-01-11" version="1">MKTLISKHWHLMLIGFVALIMGGFVLFYFQGSVSSFPAVQPKQAQEEPDEAKYEIVTVGVKGDGFYPKNIEVKAGVPTKINFKKMTSFTCIDEVQSLKIGMDVYLDHENNYFTVQDLKPGIYEYNCGMYMYYGTITVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAD7</accession>
    <name>E3EAD7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exopolysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvfF</name>
        <name evidence="2" type="ORF">PPSC2_21600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373122.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08795"/>
    <dbReference type="EnsemblBacteria" id="ADO58555">
        <property type="protein sequence ID" value="ADO58555"/>
        <property type="gene ID" value="PPSC2_21600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4592"/>
    <dbReference type="eggNOG" id="COG5039">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045699_0_0_9"/>
    <dbReference type="OMA" id="DYPLYGN"/>
    <dbReference type="OrthoDB" id="669257at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007345">
        <property type="entry name" value="Polysacch_pyruvyl_Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04230">
        <property type="entry name" value="PS_pyruv_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PS_pyruv_trans" evidence="1">
        <location>
            <begin position="37"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="324" mass="37546" checksum="D7EAE83F471044C0" modified="2011-01-11" version="1">MPNSHPMAKLKNKLSVILDVVPQGSNIIYVDYPVYNNGGDVLIMKGTEAFFKDNDIRVRARYSAMDIPDQLHIPGDWIIVCHGGGNFGDLYSNHQNLRERIVRDFPNHRIVIMPQTIHFQSEQKANEVAALFNAHPDLHMFVRDTRSYQWAKDKLNQCNITLCPDMAHQLWPLKPTTETVKDVLYFLRTDIETVGGQKKFDDEADASHRLDWDTLFTPLEVKGIVYFQKFYRLNKKIGGPLPTRTFWYKYTDHLMNKAVMLFSSYREVRTSRLHGHILACLLDMPHIVIDNSYGKNSQYYNTWTQPNPKAKLFSETPEALEQPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAF7</accession>
    <name>E3EAF7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">kinB5</name>
        <name evidence="7" type="ORF">PPSC2_21695</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373142.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4628"/>
    <dbReference type="EnsemblBacteria" id="ADO58575">
        <property type="protein sequence ID" value="ADO58575"/>
        <property type="gene ID" value="PPSC2_21695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4615"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1738727_0_0_9"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HisKA" evidence="6">
        <location>
            <begin position="29"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="16865" checksum="8EA2FB90EE976A89" modified="2011-01-11" version="1">MLSSVETRLAQFLSICSVFSTNLLVEKNKINKLISDISHQTKTPVANILLYAQLLSEHDLPEDSSSCIKALASRAEKLNFLTNTLVKTSRLKVGIITVSPRQESVQELLHVAREQMIPKADTKDISIVMENTPIHTCFVLKWMAVLWTML</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAR4</accession>
    <name>E3EAR4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58978.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_017428602.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11145"/>
    <dbReference type="EnsemblBacteria" id="ADO58978">
        <property type="protein sequence ID" value="ADO58978"/>
        <property type="gene ID" value="PPSC2_23640"/>
    </dbReference>
    <dbReference type="GeneID" id="66575343"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5004"/>
    <dbReference type="eggNOG" id="COG3828">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100195_0_0_9"/>
    <dbReference type="OMA" id="SHILQDW"/>
    <dbReference type="OrthoDB" id="1452706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029010">
        <property type="entry name" value="ThuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06283">
        <property type="entry name" value="ThuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ThuA" evidence="1">
        <location>
            <begin position="33"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58978.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="212" mass="24379" checksum="FE6475DD2D365783" modified="2015-05-27" version="2">MEKRKALLLGDYSYPEFHPLQGVDEEISHILQDWMTVQCSENRKMLLKENLASFDLCISYCDSRKEVLSPQQTAGLLSYVSGGGGLLVLHNGITLQGRYEIAQLMGARFLRHPAAEQLSFKVTEPDHPIMEGIEPFEIQEEPYRFDFDPFTEKTLLMEYEYEGQWWPAAWSLSYGLGRVVYLMPGHNQPSFQHEGYRKLLLQAAKWAGRFPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAR5</accession>
    <name>E3EAR5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">abrB7</name>
        <name evidence="3" type="ORF">PPSC2_23645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373515.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11150"/>
    <dbReference type="EnsemblBacteria" id="ADO58979">
        <property type="protein sequence ID" value="ADO58979"/>
        <property type="gene ID" value="PPSC2_23645"/>
    </dbReference>
    <dbReference type="GeneID" id="66575342"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23645"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5005"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117609_0_0_9"/>
    <dbReference type="OMA" id="MTMEIDI"/>
    <dbReference type="OrthoDB" id="1942483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="2">
        <location>
            <begin position="5"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="149" mass="17072" checksum="49B2A0F3FA3083A6" modified="2011-01-11" version="1">MKRTGMTRPLDSLGRIVLPKELRMTMEIDIGDPLEFFIEGQTLMLRKYKSTNCIFCGSVDTNTYFKDQFICDACATSMKTEDLLPVTATETQSPPLKQNMHMKKIYQRTDVILEKMRELMEEHPASSQKQLASMLGVSQGRISQLKKLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAT4</accession>
    <name>E3EAT4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pirin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_23740</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pirin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373534.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11245"/>
    <dbReference type="EnsemblBacteria" id="ADO58998">
        <property type="protein sequence ID" value="ADO58998"/>
        <property type="gene ID" value="PPSC2_23740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5024"/>
    <dbReference type="eggNOG" id="COG1741">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064194_2_2_9"/>
    <dbReference type="OMA" id="ERGYADH"/>
    <dbReference type="OrthoDB" id="729805at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012093">
        <property type="entry name" value="Pirin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003829">
        <property type="entry name" value="Pirin_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041602">
        <property type="entry name" value="Quercetinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43212">
        <property type="entry name" value="PTHR43212"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02678">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17954">
        <property type="entry name" value="Pirin_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006232">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pirin" evidence="3">
        <location>
            <begin position="15"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Pirin_C_2" evidence="4">
        <location>
            <begin position="159"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF17954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="237" mass="26585" checksum="F8F68E0C4A5613C5" modified="2011-01-11" version="1">MFTIYPAASRFSFDKGWLRGSHSFSFAEYQDENNTAFGPMRVCNDDVITPGRGFGAHPHSDMEIVSIVLYGELRHEDNRGHVAVTRFGGIQRMSAGHGIIHTEHNASQTEDVSLLQLWFSPHTRGLQPSYETTAFNTERLHGQLLLVVAGKRVPGTEGEIASINQDLTIYLSKLQPGEQVEFTQAEGRRVFLFVIEGSLRVNGEYLLQGRDSARIEEEPKLSLKAEDSVFYMLIDLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB11</accession>
    <name>E3EB11_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sugar diacid utilization regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_25050</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12545"/>
    <dbReference type="EnsemblBacteria" id="ADO59291">
        <property type="protein sequence ID" value="ADO59291"/>
        <property type="gene ID" value="PPSC2_25050"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25050"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5308"/>
    <dbReference type="eggNOG" id="COG3835">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043769_1_1_9"/>
    <dbReference type="OMA" id="SVNVMDH"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2840">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008599">
        <property type="entry name" value="Diacid_rec"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025736">
        <property type="entry name" value="PucR_C-HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042070">
        <property type="entry name" value="PucR_C-HTH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05651">
        <property type="entry name" value="Diacid_rec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13556">
        <property type="entry name" value="HTH_30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Diacid_rec" evidence="1">
        <location>
            <begin position="4"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="HTH_30" evidence="2">
        <location>
            <begin position="285"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="346" mass="39322" checksum="FA34E78597415268" modified="2011-01-11" version="1">MFPLSERQAQDIVDKMMKDIPYNINIMNERGIIIGSGESERIGTIHQGAVQALETEKMIEVWQDGHYEKKGTNEPIVIHHELVGVIGISGNPDEVRPFCNIVKTTVSLLIEQRISLEHLAHEANRKKSVLEMLLNHQGAYTQKIKKEAAQYHIDLLLKTSAVYVKHLPSDPAHLAELSNILMQHPSFRMEEDSYLILIQNQEPTAKLLEPLVRSHPDVLLAISRQEHSIANVYMQAKSAMNVLLALRPPVQIVSFVEVEFLVKLSQTNLTNTIHLVSKLEDTVDLLDTLRSFINHNGSVSFTADELNIHRNTLQYRLKRIHTLTGKDPRNLLQLFELTHGLLALYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB48</accession>
    <name>E3EB48_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uracil-DNA glycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373861.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5392"/>
    <dbReference type="EnsemblBacteria" id="ADO59328">
        <property type="protein sequence ID" value="ADO59328"/>
        <property type="gene ID" value="PPSC2_25220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5345"/>
    <dbReference type="eggNOG" id="COG1573">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044815_1_3_9"/>
    <dbReference type="OMA" id="NCRGYLE"/>
    <dbReference type="OrthoDB" id="1529383at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00986">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="1">
        <location>
            <begin position="34"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="22593" checksum="6F728DE8FB90A026" modified="2011-01-11" version="1">MDHPYVILPEEQAPDGIEHCEICELSKQRNRVIWGEGNPKAPLMMILDNPGAREDREGNSFLCGTRETLQYGMREAGIDVNDVYVTYLLKCRPMRAYNKPEARAACLPHLQIQLFQKQPLVLFGFGNVVAGAIFTNKEGASVKELRGSWYELQGTPISFTYHPLAVRRRANLLRFFVEDLKALKEKWKEIQLKQDID</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBH3</accession>
    <name>E3EBH3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">UDP-glucosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ydhE</name>
        <name evidence="1" type="ORF">PPSC2_22025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373213.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09175"/>
    <dbReference type="CAZy" id="GT1">
        <property type="family name" value="Glycosyltransferase Family 1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58647">
        <property type="protein sequence ID" value="ADO58647"/>
        <property type="gene ID" value="PPSC2_22025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4687"/>
    <dbReference type="eggNOG" id="COG1819">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000537_7_1_9"/>
    <dbReference type="OMA" id="DQPMVAQ"/>
    <dbReference type="OrthoDB" id="1485440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008194">
        <property type="term" value="F:UDP-glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006326">
        <property type="entry name" value="UDPGT_MGT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01426">
        <property type="entry name" value="MGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="399" mass="44636" checksum="5430311BA574A04B" modified="2011-01-11" version="1">MLNVLMVNFPAEGHVNPTLGITQAFAARGDQVHYITTEKYKNRLEAVGAKVHLHPDLVRTASIDTSTPAGLNAFMNIHIQTSMDILAIIQELSERIQFDLVFYDRFGAGELVRDYLNIPGISSSPSFLISNHLMAANLFRSDAKVPFQPDEQVTTSLHLMKERFGVAPKEMVQFMNNSGALNVVYTSKYFQPNGEQFGDEHLFIGPSFPERKGENSFPLDRLQDKKVLYISMGTVLDHTEDFFNTCIEAFSDFEGIVVIAAGEKADFTKINPAPEHFIISPYVPQLEVLRHSDVFITHGGMNSVNEGIHFNVPLVVLPQDKDQPMVAQRLTELQAGYRITKDQINTQTLRDGVHEVMSNAAYKEGVQKINDSFQQSGGTKEALAKIDAYLDAYLQHKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBJ9</accession>
    <name>E3EBJ9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA polymerase sigma factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sigW13</name>
        <name evidence="5" type="ORF">PPSC2_22140</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373239.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09630"/>
    <dbReference type="EnsemblBacteria" id="ADO58673">
        <property type="protein sequence ID" value="ADO58673"/>
        <property type="gene ID" value="PPSC2_22140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4713"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_0_9"/>
    <dbReference type="OMA" id="TWMYRIV"/>
    <dbReference type="OrthoDB" id="1914729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014294">
        <property type="entry name" value="RNA_pol_sigma-W_bacilli"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000838">
        <property type="entry name" value="RNA_pol_sigma70_ECF_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02948">
        <property type="entry name" value="SigW_bacill"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01063">
        <property type="entry name" value="SIGMA70_ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="3">
        <location>
            <begin position="23"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="4">
        <location>
            <begin position="129"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="22205" checksum="51E662AE03BD086B" modified="2011-01-11" version="1">MDNMESRLVRLVQKGDQRAFAELVELYKDRIFHLSYRMLGNRHEAEDLVQETFLRVYRNLEKYDHGQKFSTWIYRIATNLCIDRLRRRKPTYSLDAEMNDQEGVDGYAMLASEELTPEGSTLLSETQALIHDAIDSLPDKYKTIMVLRYLQELSLQEISDVLNLPVTTIKTRVHRGRDFLRKKLEHKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBR7</accession>
    <name>E3EBR7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Flagellar basal body rod protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">flhO</name>
        <name evidence="4" type="ORF">PPSC2_23205</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373422.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10690"/>
    <dbReference type="EnsemblBacteria" id="ADO58885">
        <property type="protein sequence ID" value="ADO58885"/>
        <property type="gene ID" value="PPSC2_23205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4914"/>
    <dbReference type="eggNOG" id="COG4786">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013687_0_0_9"/>
    <dbReference type="OMA" id="NLYFAIQ"/>
    <dbReference type="OrthoDB" id="947161at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="2">
        <location>
            <begin position="5"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="3">
        <location>
            <begin position="214"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="31913" checksum="4C4C9DA5E37235B2" modified="2011-01-11" version="1">MLRGLYTAAAGMMTQQRRHDTVTQNIANMNTTGYKQENSVQRSFPEMLISMTGGNPDNPDRTVGKLNTGVFAEESLSPYIQGALKDSGQTTDFALQSNINVNDPATGRPMAFDQAGKFINANGEVTYRPEAFFTVRDNNGNVRYTRDGHFQVNGTGALLSSTGSAVLDTNGNPIQLTGSVSALKVNERGQLVDSQSNQLLGTTLGISVIDRPYQLVREGNGNFRLNDTDGATARMMTANDTVSVRQGYLEVSNVDAAQSMVDMMAALRAYEANQKVIQFYDKSLDKAVNEVGRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBS9</accession>
    <name>E3EBS9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">ATP synthase subunit alpha</fullName>
            <ecNumber evidence="10">7.1.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">ATP synthase F1 sector subunit alpha</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">F-ATPase subunit alpha</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 14" type="primary">atpA</name>
        <name evidence="14" type="ORF">PPSC2_23255</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + 4 H(+)(in) + H2O = ADP + 5 H(+)(out) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:57720"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="7.1.2.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="10">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <dbReference type="EC" id="7.1.2.2" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373434.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10745"/>
    <dbReference type="EnsemblBacteria" id="ADO58897">
        <property type="protein sequence ID" value="ADO58897"/>
        <property type="gene ID" value="PPSC2_23255"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23255"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4924"/>
    <dbReference type="eggNOG" id="COG0056">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010091_2_1_9"/>
    <dbReference type="OMA" id="LQAPGVM"/>
    <dbReference type="OrthoDB" id="837522at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18113">
        <property type="entry name" value="ATP-synt_F1_alpha_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01132">
        <property type="entry name" value="F1_ATPase_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01346">
        <property type="entry name" value="ATP_synth_alpha_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023366">
        <property type="entry name" value="ATP_synth_asu-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000793">
        <property type="entry name" value="ATP_synth_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038376">
        <property type="entry name" value="ATP_synth_asu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033732">
        <property type="entry name" value="ATP_synth_F1_a"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005294">
        <property type="entry name" value="ATP_synth_F1_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020003">
        <property type="entry name" value="ATPase_a/bsu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036121">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00306">
        <property type="entry name" value="ATP-synt_ab_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039088">
        <property type="entry name" value="F_ATPase_subunit_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50615">
        <property type="entry name" value="SSF50615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00962">
        <property type="entry name" value="atpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00152">
        <property type="entry name" value="ATPASE_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="5 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0139">CF(1)</keyword>
    <keyword evidence="10" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 10" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP-synt_ab_N" evidence="13">
        <location>
            <begin position="27"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab" evidence="11">
        <location>
            <begin position="149"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab_C" evidence="12">
        <location>
            <begin position="371"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="169"/>
            <end position="176"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Required for activity" evidence="10">
        <location>
            <position position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF02874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO58897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="504" mass="54794" checksum="B5A7AC8E6C8256D0" modified="2011-01-11" version="1">MSIKPEEISSLIKSQIEQYKNDIEVVEVGTVVEVGDGIARVYGLEKVMAGELVEFDTGVLGLALNVEESNVGVVILGQFSDIREGGQVKRTGQIMQVPVGEAMIGRVVNPLGQPVDGKGPIATTEFRPVESQAPGVMARKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTSIAIDAILNQKGNGMKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPSPLLYIAPYSGCAMGEYFMYKGEHVLVVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLEADLFYAGQRPAINVGISVSRVGGSAQIKAMKKVAGSLRLDLAQYRELQAFSQFGSDLDKSTKARLDRGARMMEILKQGVNQPLAVEQQVVSLYTAVKGFLDDIPVSDVKRFEKDFLSFMESDHQDVLQSIRDTKDLVADNEAALKAAIEKFKKSFATSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECI8</accession>
    <name>E3ECI8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yisY</name>
        <name evidence="2" type="ORF">PPSC2_01700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368971.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14490"/>
    <dbReference type="EnsemblBacteria" id="ADO54331">
        <property type="protein sequence ID" value="ADO54331"/>
        <property type="gene ID" value="PPSC2_01700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.340"/>
    <dbReference type="eggNOG" id="COG2267">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020336_12_3_9"/>
    <dbReference type="OMA" id="EGQIRSW"/>
    <dbReference type="OrthoDB" id="1282004at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="23"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="30920" checksum="FB388ED9A77816D8" modified="2011-01-11" version="1">MGYYIEVERGVKLYVEDIGEGIPVLMVHGWPLDHRMYEYQVALLPAYGYRCIQVDLRGFGKSDRPWHGYHYDRLADDLLAVIQALQLSHIRLIGFSMGGAIVTRYMSRHRGWGVDQLILIGAATPRFTPTSDFPYGTPVAEVDKLIKQAYTDRPQLVTSFGEMLFANPVSQSLRDWLRDQGFAASVHSMACTLYSLRDSDLRPDLPCIHVPTWILHGKLDRVCPFPLAIQTQKGIAGSRLIPFERSGHSVFYEALPEFNSTLLSILSPSSLHPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECT2</accession>
    <name>E3ECT2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hyaluronidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hyl</name>
        <name evidence="4" type="ORF">PPSC2_01915</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369016.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14680"/>
    <dbReference type="CAZy" id="GH84">
        <property type="family name" value="Glycoside Hydrolase Family 84"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54376">
        <property type="protein sequence ID" value="ADO54376"/>
        <property type="gene ID" value="PPSC2_01915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.385"/>
    <dbReference type="eggNOG" id="COG3525">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001501_5_1_9"/>
    <dbReference type="OMA" id="CRFVGRF"/>
    <dbReference type="OrthoDB" id="1158117at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016231">
        <property type="term" value="F:beta-N-acetylglucosaminidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.379.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011496">
        <property type="entry name" value="Beta-N-acetylglucosaminidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029018">
        <property type="entry name" value="Hex-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015882">
        <property type="entry name" value="HEX_bac_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02838">
        <property type="entry name" value="Glyco_hydro_20b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07555">
        <property type="entry name" value="NAGidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55545">
        <property type="entry name" value="SSF55545"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_20b" evidence="3">
        <location>
            <begin position="80"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="608" mass="70076" checksum="1919D12820F9AE12" modified="2011-01-11" version="1">MELSRGMRPNSGVGLTPQEIQYYFRDVYDSGDKLVISEPNLICELSSRFAMNQEYEGALDPEGPIRLIAPPGPGVPTETRGSVQLVLEYDRTLTADGYRLDIQKEGRIEIHASNKRGLKYGMDALHLLLQVEQERCTLPVISIRDEPSFPVRGIIEGFYGKPWSFADRLDAVHFMAAHRMNTFMYAPKDDPYHRELWREPYPEETFAQIRELKEACERHEVDFHYCISPGNDLSFGSDEDFLKLTEKLAAMMAIGVRHFSILMDDIDYVLKGENRHLLGRSGHAHVFLTNKVHTWLAERLPEFTLTVCPSEYWSYWDTEYKKDFRERLHPEIKVFWTGYFVFAPQISRQHAADNHAFYRHDLWLWDNVPVNDCDHDRLFLDPLRGRYSGLPDCGHTGMVANPMNQWECSKVTLITMSHYMWNSERYMPELSWEWAVRELVGEHTDELMFFCRQNKNSRLGGSTYEDVDLALQMRDIPALDIYFERLLYVVSVLQNISADDPAAGFVAQAAPWLERAKLDVSLWQVLRQAALGSERQNDVQSLGNLMQSEATDGQEPPPLTDEVVDELRRSITACLEAEARLGSNPAIRAAVQWGYVDQDEQGKHRLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECV1</accession>
    <name>E3ECV1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mmyG</name>
        <name evidence="3" type="ORF">PPSC2_04145</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369455.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0837"/>
    <dbReference type="EnsemblBacteria" id="ADO54820">
        <property type="protein sequence ID" value="ADO54820"/>
        <property type="gene ID" value="PPSC2_04145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.826"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_25_0_9"/>
    <dbReference type="OMA" id="VDALCYV"/>
    <dbReference type="OrthoDB" id="1339160at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="6"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="141"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="376" mass="40525" checksum="F637661455BDCAA1" modified="2011-01-11" version="1">MVQQKIRAGIVGGSMNNKWASQTHIPALLKHPNLDITAIGTSRMESARKSAKGVGASLAFDDAKKLAASKEVDMVVVSVKVPHHNEAVMAAIQEGKHIFCEWPLGANTAEAAEMAKAAELAGIHHIVGLQARQDFEVQTMKKLVEDGTIGEIVSCHMQVATSGKGGRTDQDTAYLLNRASGANLLTINGGHSLDALQYIVGEFRELSAITASRYNEAIIQETGEIIAKDTADQILIHGLLEKGTPVSVHIQGGVNSKFELEIQGKKGSLRLSQNPSLGHVQFGNLTLEKLVYDQGSHQSYIPNGFFEPIRIAAEPDGCLDFPKEGVTLNVAKAHHVFAEDILTGTRLAPDFNHALKLHQLLDCIEESAATGKKIIW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECW6</accession>
    <name>E3ECW6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-981</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-981</name>
        <name evidence="1" type="ORF">PPSC2_04220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369470.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0852"/>
    <dbReference type="EnsemblBacteria" id="ADO54835">
        <property type="protein sequence ID" value="ADO54835"/>
        <property type="gene ID" value="PPSC2_04220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04220"/>
    <dbReference type="HOGENOM" id="CLU_2570611_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="81" mass="8861" checksum="4B15B5CF5D8F9461" modified="2011-01-11" version="1">MPHLPKSDGKAVEHAFLSQATFLEGLPNLHSKQPAVLPETHRLKKRSLEPAVRADVKALLDEACANKLHPAERAHPTVATK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED26</accession>
    <name>E3ED26_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antitoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydcD</name>
        <name evidence="2" type="ORF">PPSC2_06310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55294.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429334.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19255"/>
    <dbReference type="EnsemblBacteria" id="ADO55294">
        <property type="protein sequence ID" value="ADO55294"/>
        <property type="gene ID" value="PPSC2_06310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1304"/>
    <dbReference type="eggNOG" id="COG0864">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_172321_0_1_9"/>
    <dbReference type="OrthoDB" id="1863932at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013321">
        <property type="entry name" value="Arc_rbn_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002145">
        <property type="entry name" value="CopG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01402">
        <property type="entry name" value="RHH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RHH_1" evidence="1">
        <location>
            <begin position="9"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55294.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10636" checksum="F1B1142EFB0D088F" modified="2015-05-27" version="2">MANLQNTKRIMISLPDHLLQEVDGIVAMENSNRSEFIRQAMKLYVGERKKRYIREAMQRGYMEMAKINLTMASEAFHAEEDANSTLGRTVSGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED33</accession>
    <name>E3ED33_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">marR5</name>
        <name evidence="2" type="ORF">PPSC2_06365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55301.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599548.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1321"/>
    <dbReference type="EnsemblBacteria" id="ADO55301">
        <property type="protein sequence ID" value="ADO55301"/>
        <property type="gene ID" value="PPSC2_06365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1311"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_4_9"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55301.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="17227" checksum="EB813B4011AED27B" modified="2015-05-27" version="2">MDTQLLGNISENILGLFPIVKKKFFTYGPLDFPLHLSPNNFQVLMLLREVRSSTVSDLSKQLNVSRPNMTPLLDKLVEHGLADRQSCDSDRRVVNVAITEEGDAFCEQVFHTFSNKIQERLVYLPEEELLHLSETLNELKQILLKIDNSAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED40</accession>
    <name>E3ED40_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-550</name>
        <name evidence="2" type="ORF">PPSC2_02150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369037.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14915"/>
    <dbReference type="EnsemblBacteria" id="ADO54397">
        <property type="protein sequence ID" value="ADO54397"/>
        <property type="gene ID" value="PPSC2_02150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.406"/>
    <dbReference type="eggNOG" id="COG1680">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020027_11_2_9"/>
    <dbReference type="OMA" id="CAIAQNG"/>
    <dbReference type="OrthoDB" id="1439085at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta-lactamase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="43035" checksum="472A669B1F7D38C8" modified="2011-01-11" version="1">MSRFDKVDQLLQRFLANGPAGCGCAIAQNGQVLYEGYHGYADVETRKPITEDTVYRLFSMTKVVVCAAALMLYERGQFLLNEPLCEYLPEFRNAHVFKTAPNGYTYVDKAEKPILIKHIFNMSIGLPYASESSETGKAMQKAIAGLKEKQGKYDLRTEIKALSEVPLAFEPGTRWLYGYGHDLVAGLIEVISGKSLGQFLKDEIFDPLGMNNTGYRYRGDIESRMASMYQRTDSGKLEKIEGFLDEYHQPDAIYEGGGAGLYSTVKDYLTFSQMMSNGGTVNGVNLLGRKTIDLMRTNHLNTAQLSDFTNSYHTGYGYGLGVRTLMDKAAGHANSSIGEFGWSGMAGTWVSIDPSEQFSVVYMHQLDPNMEEYHHLRIRAAAYSCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDA8</accession>
    <name>E3EDA8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ybdK</name>
        <name evidence="12" type="ORF">PPSC2_02465</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369105.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15200"/>
    <dbReference type="EnsemblBacteria" id="ADO54465">
        <property type="protein sequence ID" value="ADO54465"/>
        <property type="gene ID" value="PPSC2_02465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.475"/>
    <dbReference type="eggNOG" id="COG0642">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_607876_0_0_9"/>
    <dbReference type="OMA" id="DKGPGME"/>
    <dbReference type="OrthoDB" id="1827824at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="31"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="190"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="213"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="280"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO54465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="476" mass="53851" checksum="DA8B2D05F9955AB3" modified="2011-01-11" version="1">MNGMRKRWTGLHLNSRPGQGGRFRNSLLFRYLVIIVFAMVLLPIVLPVTTLIYSILLNLQTDIKPTNPYYPSTTHTENSWHREAIALKGANPEQVSAHLRKIQQNMFPDSQIFWVDTAGLTRLELPTQPNIPKQWSAAQAIAFMKQASYDGPFTVVAFIGGGKDDVNQGYMVLKVPRSFFEQSSTDNGMLMYYLLFILLVLGAFIFVSLLFFGGIRRRLLQLQAAMSQRGEDGLPILVATGRPDEIGKLEEAFNRMVEQLAESRGRERQEEELRKRLVADLSHDIRTPLTVVRSHLYTLDAENLSSRGKQSITLMENKLKDLGSLIDNLLTYNLLSSGKYTMNNEPRDILRLVRECAASWYPVWEKEGFEVDIDLPEHSMVWNVDEQGFRRLLDNLFQNVVRHAASGRYIGIQVQKVNGREALVIADKGPGMERQSSEKGAGIGLAITELLAREMNLEREICSSSAGTRICFLNKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDR5</accession>
    <name>E3EDR5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphinothricin acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywnH</name>
        <name evidence="2" type="ORF">PPSC2_06710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370004.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19675"/>
    <dbReference type="EnsemblBacteria" id="ADO55373">
        <property type="protein sequence ID" value="ADO55373"/>
        <property type="gene ID" value="PPSC2_06710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1381"/>
    <dbReference type="eggNOG" id="COG1247">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_4_3_9"/>
    <dbReference type="OMA" id="IFAHNQP"/>
    <dbReference type="OrthoDB" id="1809950at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="7"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="19093" checksum="0733DC489BB3BFFE" modified="2011-01-11" version="1">MNNDQSFSIEIACREDLPDIVDIYNSTIAGRMVTADLEPVTVESRIPWFEAHEENHRPLWVLRQKGTIAGWASLQSFYGRPAYNGTAEISIYVHEDSRGTGTGSRLVQHLLNECPRLGITTLLGFVFGHNEPSIALLRKFGFEQWGYYPRVAVLDSIERDLAILGKRVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDZ1</accession>
    <name>E3EDZ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Serine/threonine protein kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ybdM</name>
        <name evidence="3" type="ORF">PPSC2_02495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369111.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15230"/>
    <dbReference type="EnsemblBacteria" id="ADO54471">
        <property type="protein sequence ID" value="ADO54471"/>
        <property type="gene ID" value="PPSC2_02495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.481"/>
    <dbReference type="eggNOG" id="COG0515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000288_135_5_9"/>
    <dbReference type="OMA" id="GSYGIAY"/>
    <dbReference type="OrthoDB" id="1377603at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004713">
        <property type="term" value="F:protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020635">
        <property type="entry name" value="Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00219">
        <property type="entry name" value="TyrKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="2">
        <location>
            <begin position="27"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="56"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="32752" checksum="2FEBA79901AF9E9A" modified="2011-01-11" version="1">MFAWLRNIYESWMDYPKQPGDLLSGRYCVRSLLGMGSYGLTYLCLDRHSGQEVAVKLPRPSKRAQAVQLLQREAHIMRQMEHPYIPKLLENDIHSDEMYMVMEYVSGMTLEELIFEQERSFTEQECIVYILELMERVLHVHERGYIHRDIRIPNVIHREGMPYLIDFGLALAVGERQEDVFTEAMLEKRAPERQDVAFYSDLYDIGHFMLFMLYSSYEPQPDQPPGSWQEELVLSQPVRHILERLFQIRPRYENSRQFMQELEEALLLLEVNPEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE46</accession>
    <name>E3EE46_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-680</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-680</name>
        <name evidence="2" type="ORF">PPSC2_02835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369166.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0542"/>
    <dbReference type="EnsemblBacteria" id="ADO54526">
        <property type="protein sequence ID" value="ADO54526"/>
        <property type="gene ID" value="PPSC2_02835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.537"/>
    <dbReference type="eggNOG" id="ENOG5032CMY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2168479_0_0_9"/>
    <dbReference type="OMA" id="YWVILVI"/>
    <dbReference type="OrthoDB" id="1827198at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="11946" checksum="DC453BCF13F607DE" modified="2011-01-11" version="1">MMDRKEVEQVGTSAIWEAVIYWVILVISALCVIAVSGSRKTASTIILAPIVLFCTIFMMQGSVFTAMKHPTMGANVGLGMAFLTTWVVSGILFAVALVIAFIKYSKRNKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEB9</accession>
    <name>E3EEB9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">xylE</name>
        <name evidence="10" type="ORF">PPSC2_05185</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369675.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18110"/>
    <dbReference type="EnsemblBacteria" id="ADO55042">
        <property type="protein sequence ID" value="ADO55042"/>
        <property type="gene ID" value="PPSC2_05185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1050"/>
    <dbReference type="eggNOG" id="COG2814">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_30_5_9"/>
    <dbReference type="OMA" id="WNCILAF"/>
    <dbReference type="OrthoDB" id="955823at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="118"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="152"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="190"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="266"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="309"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="333"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="362"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="398"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="429"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="28"/>
            <end position="452"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="466" mass="50806" checksum="65B38982A2049593" modified="2011-01-11" version="1">MGVIIHNESAQQKALQSEKPSMLFVTLVSIVAALGGILFGFDIAVVSGAVEFLQQRFSLSEFQVGWAVSSLIVGSITGAALSGYMSERIGRKKVLLAAGFLFVVGSICSAIQDSFTGYVIFRMIGGVGIGITSTICPVYNAEIAPAKYRGRLVALNQLAIVTGIFLVYFQNSWIVSLGDEAWGVSTAWRWMFGVGAVPGLIFMLLMLFIPESPRWLIKKNRPYEALPILLKIHGEEAAKQEVLDIKESFKNENDSLKQLFAPGIRVALFIGIMLAIMQHITGINAILYYAPVIFKGMGLGTDASLTQTIWIGLINVLFTIVSVWLIDKAGRKVLLMIGTSLMTLCLVIIGAAFKMGLTTGPLVLIMILIYVASYAISLGPIVWVMISEIFPNRIRGKAVAIASMALWAGDYLVSQAFPPLLSSAGPSNTFWIFGAISLFVVVFIWRKVPETKGRSLEQMENMWLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEF9</accession>
    <name>E3EEF9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cmo5</name>
        <name evidence="2" type="ORF">PPSC2_06875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370041.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1431"/>
    <dbReference type="EnsemblBacteria" id="ADO55410">
        <property type="protein sequence ID" value="ADO55410"/>
        <property type="gene ID" value="PPSC2_06875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1417"/>
    <dbReference type="eggNOG" id="COG2226">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081790_0_0_9"/>
    <dbReference type="OMA" id="FRGWVAY"/>
    <dbReference type="OrthoDB" id="1739932at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013217">
        <property type="entry name" value="Methyltransf_12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08242">
        <property type="entry name" value="Methyltransf_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_12" evidence="1">
        <location>
            <begin position="65"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="30040" checksum="C0D8601B98B45855" modified="2011-01-11" version="1">MKQPHIGNTDSNQPMSWNHPNVHKYADTIALKIPGYTHLYEMTDCLITAQLEVQAHNKNIDPNVLIVGAGGGQELITLGGRHEAWSFRAVDPSEHMLDLARQRVTQAGIGSKISFVTGTLEELSGKSPKEQYEKRSEESCREPVYDAATCLLVLHFLQSLENKQALLRQISGRLKPGAPFCLASINGNPQDPSFSIQMQAWKGHMLSQGISLEDWERFAASIGRESNPVSNAAIQELLIDAGFTRIIRYYGAFLVNAWFAVKEGETAYDKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEP7</accession>
    <name>E3EEP7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhxC</name>
        <name evidence="2" type="ORF">PPSC2_08320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20925"/>
    <dbReference type="EnsemblBacteria" id="ADO55734">
        <property type="protein sequence ID" value="ADO55734"/>
        <property type="gene ID" value="PPSC2_08320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1749"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_4_1_9"/>
    <dbReference type="OMA" id="WEVANVI"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="306" mass="33134" checksum="2B88638A56A452C7" modified="2011-01-11" version="1">MQMLHPKKYLILKGECIMAKSNQPQQTLPPQHQDQQPGIESKMTPAPQFEKPTYKAAGKLTGKVALITGGDSGIGRAVAVTYAKEGADVAIVYLNEHKDAEETKRQVEQEGRKCVLIPGDIGDDQFAKKAVQQTVNELGKLDIVVNNAAEQHPQQKLEDITKEQLERTFRTNIFGMFFLTQAALPHLKKGSAIVNTTSITAYAGNKTLIDYSSTKGAITSFTRSLSLNLADQGIRVNAVAPGPIWTPLIPSTFDAKTVSEFGGAQPMKRPGQPEELAPAYVYLASDDSSYVSGQVIHINGGEVVNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EER0</accession>
    <name>E3EER0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Transcriptional repressor NrdR</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nrdR</name>
        <name evidence="10" type="synonym">ytcG</name>
        <name evidence="10" type="ORF">PPSC2_08380</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the NrdR family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370366.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20985"/>
    <dbReference type="EnsemblBacteria" id="ADO55747">
        <property type="protein sequence ID" value="ADO55747"/>
        <property type="gene ID" value="PPSC2_08380"/>
    </dbReference>
    <dbReference type="GeneID" id="66578236"/>
    <dbReference type="KEGG" id="ppm:PPSC2_08380"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1761"/>
    <dbReference type="eggNOG" id="COG1327">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_108412_0_0_9"/>
    <dbReference type="OMA" id="YRFTTYE"/>
    <dbReference type="OrthoDB" id="1551627at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00440">
        <property type="entry name" value="NrdR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005144">
        <property type="entry name" value="ATP-cone_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003796">
        <property type="entry name" value="RNR_NrdR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30455">
        <property type="entry name" value="PTHR30455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03477">
        <property type="entry name" value="ATP-cone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00244">
        <property type="entry name" value="TIGR00244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51161">
        <property type="entry name" value="ATP_CONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0678">Repressor</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="ATP-cone" evidence="9">
        <location>
            <begin position="49"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="zinc finger region" evidence="7">
        <location>
            <begin position="3"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="155" mass="18047" checksum="87FC6F363DDD100F" modified="2011-01-11" version="1">MKCPYCAYNGTKVLDSRPANDNKSIRRRRECEQCARRFTTFEMVEETPLMVIKKDGSREEFSRDKMLRGLIRACEKRPVSVEQLDLIVSQVENAIRNTAATEVDSQQIGELVMEQLYPVDEVAYVRFASVYRQFKDINMFMKELKTLLSKDTDSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EES4</accession>
    <name>E3EES4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="16">PTS fructose transporter subunit IIC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">fruA</name>
        <name evidence="16" type="ORF">PPSC2_08460</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370380.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21065"/>
    <dbReference type="EnsemblBacteria" id="ADO55761">
        <property type="protein sequence ID" value="ADO55761"/>
        <property type="gene ID" value="PPSC2_08460"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1778"/>
    <dbReference type="eggNOG" id="COG1299">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1445">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1762">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013155_1_0_9"/>
    <dbReference type="OMA" id="CKLMAPH"/>
    <dbReference type="OrthoDB" id="1810962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005351">
        <property type="term" value="F:carbohydrate:proton symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022877">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00211">
        <property type="entry name" value="PTS_IIA_fru"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05569">
        <property type="entry name" value="PTS_IIB_fructose"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016152">
        <property type="entry name" value="PTrfase/Anion_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002178">
        <property type="entry name" value="PTS_EIIA_type-2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013011">
        <property type="entry name" value="PTS_EIIB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003501">
        <property type="entry name" value="PTS_EIIB_2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013014">
        <property type="entry name" value="PTS_EIIC_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004715">
        <property type="entry name" value="PTS_IIA_fruc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003353">
        <property type="entry name" value="PTS_IIB_fruc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006327">
        <property type="entry name" value="PTS_IIC_fruc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00359">
        <property type="entry name" value="PTS_EIIA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02302">
        <property type="entry name" value="PTS_IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
        <property type="entry name" value="SSF52794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55804">
        <property type="entry name" value="SSF55804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00829">
        <property type="entry name" value="FRU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00848">
        <property type="entry name" value="fruA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01427">
        <property type="entry name" value="PTS_IIC_fructo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51094">
        <property type="entry name" value="PTS_EIIA_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00372">
        <property type="entry name" value="PTS_EIIA_TYPE_2_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51099">
        <property type="entry name" value="PTS_EIIB_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51104">
        <property type="entry name" value="PTS_EIIC_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="317"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="357"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="397"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="434"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="464"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="515"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="576"/>
            <end position="594"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="606"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIA type-2" evidence="13">
        <location>
            <begin position="5"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-2" evidence="14">
        <location>
            <begin position="186"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-2" evidence="15">
        <location>
            <begin position="309"/>
            <end position="642"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO55761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="642" mass="67799" checksum="80558A9952199483" modified="2011-01-11" version="1">MRITDLMIKETMIMDLQATTKDGAIEELIASLEASGRINDRALFKEMIYKREAESSTGIGGGIAMPHAKTKAVNEATVVFAKSSKGVEFESLDGEPAKVFFMIAAPEGAANTHLRTLAALSRLLIDTDFIDKLMNTQTPDEVTELFDTKQAEEEAAKKAKEAKKEAAKAQQTPEVIVGNPDSDEFVVAVTACPTGIAHTFMAEDALIKKAKEMGVNIRVETNGSEGAQNVLTADEIRRAKGVIVAADKKVEMARFDGKPVLQRPVSDGIRKSEELIRKALNGDAPIYRSEGKGSAEESKAEKTSVGSKIYKDLMNGISHMLPFVVGGGILLAISFLIEQVAGEDNVLFQLLQTIGGGTGAFHFLIPILAGFIAMSIGDRPALMPGMVGGLMAVNSNAGFLGGLAAGFMAGYVVIFLRKALAGLPKALDGLKPILLYPVFGLLISGAIMFYLFDPIFGGINTWLVNVLNNLGTGNAVILGLILGGMMSIDMGGPFNKAAYAFSIGVFTSSGNTNGAMMAAVMAGGMVPPLAIALASTFFKNKFTEQERKSGLTNYVLGLSFITEGAIPFAAADPLRVLTSCIVGSAIAGGLTQFWQINLPAPHGGIFVAALANHALLFLLAVAIGSVISALILGLWKKTVETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF30</accession>
    <name>E3EF30_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yobV3</name>
        <name evidence="4" type="ORF">PPSC2_02940</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369189.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0566"/>
    <dbReference type="EnsemblBacteria" id="ADO54550">
        <property type="protein sequence ID" value="ADO54550"/>
        <property type="gene ID" value="PPSC2_02940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.559"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041141_5_2_9"/>
    <dbReference type="OMA" id="WNPKRTI"/>
    <dbReference type="OrthoDB" id="1654295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028349">
        <property type="entry name" value="PafC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016838">
        <property type="entry name" value="PafC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00420">
        <property type="entry name" value="HTH_DEOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="3">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="310" mass="35907" checksum="268E339958AB1396" modified="2011-01-11" version="1">MNERRIALMRILDSRKKYTARELAERFGVSVRTIQRDLDYLQQTGLPLYTETGPHGGYRALPNRLLPPLHLARDEALGLFLMLQLLEDIPDIPFGSVRGHLSDHYYAELPQDVQDSIDQLKDYISFRMIPTHADSPYTSLILEAALNKRRVNMHYRSASGTKWTQVYPIGLYFDHGYWYMPAHNKDRIILYRSDRVITITILDETLDSLPTLQAWLASEDSRVGIPSKIKFTALGARLAESDTLFHNVSHQEGLGQEWHGHIPVEEFRYVSRLLLKYGPEAEVVYPQELRMLVRKLLQDSLNPYLKDDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFB1</accession>
    <name>E3EFB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acyl-D-glucosamine 2-epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55073.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599522.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18240"/>
    <dbReference type="EnsemblBacteria" id="ADO55073">
        <property type="protein sequence ID" value="ADO55073"/>
        <property type="gene ID" value="PPSC2_05325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1079"/>
    <dbReference type="eggNOG" id="COG1649">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_603882_0_0_9"/>
    <dbReference type="OrthoDB" id="692424at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55073.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="477" mass="54170" checksum="EEB5BCC67032C593" modified="2015-05-27" version="2">MDNKRDERSESTDSIAQIGKMKPWALNGPSIQIDPLFPYYANRSRDSIADEIALAGYQTVHYFVVRENEVDGALVAAFQRRGIAVWAMVLGNGSFGVSQLPPAWKEWRMELLREPNDGFQRLSHFAHEYVEWKKKAAARLVTDIPFDGFEVAEPYFPEWNGLRSGVYGDIGPHAQRAFRARCGENIPNFRDKHARNYYRKVPNLYAQWVDLRVNAVNGLIHELVNGAGGVRDVRPDICVATWSLAVSGRGDIPGQLREWQGLDAVAMIGSVAPDMHVLQTHWPDWMRRRLPPQYIHGYARIAQSIRAAYPDLSLGVQADIGSLARMVRDRKWTRQFGATALEGDYNAWTAYEYHLGGYMYDEPPIPLRAERSAEDEVVISFSKRITTPSLDELRIWSREDNADSTPALNRKLTNDSLTLLELVDAAADGNRLLLRIRNLPSRAFSMRVDGVQDTPELWLLKGRKAHRNLPEHEVKVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFG9</accession>
    <name>E3EFG9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">atoS</name>
        <name evidence="10" type="ORF">PPSC2_07105</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370087.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20085"/>
    <dbReference type="EnsemblBacteria" id="ADO55460">
        <property type="protein sequence ID" value="ADO55460"/>
        <property type="gene ID" value="PPSC2_07105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1468"/>
    <dbReference type="eggNOG" id="COG4191">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_114_39_9"/>
    <dbReference type="OMA" id="IEQTAYQ"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="PAS" evidence="9">
        <location>
            <begin position="22"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="157"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="367" mass="41460" checksum="0DD46343D12B83AB" modified="2011-01-11" version="1">MISEFQEALLDTVGACPSTQIANNKYENVLENLDSGIMLFDSDGVLTFINVQMARLLELPRSSLAGRNLMQILHHPELSRFKKKKIMRIYKETIFHRKRYHELIDEYGRHWLITVTYGDQMDGDFLFSVKDVSDYKQIEQTAYQNDKLAMLGRISASIAHEIRNPLTAIRGFIQLLRPHLVELGRDEYARIILTEIDRANDIIYEFLNSSKPSAPQKTAVSVMGLLKEVVMLTESEALMKGCQIALDENDELMKVSIDVKQIKQVILNMIKNAMDAIESIGGEREGCIDIHTVLEGSYVHICIEDNGLGMDHNTLARLFDPFFTTKESGTGLGLAVSYRIIKNHGGFIHVDSKHGSGTQFKITLPVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG92</accession>
    <name>E3EG92_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ftsH1</name>
        <name evidence="2" type="ORF">PPSC2_12260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371186.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2612"/>
    <dbReference type="EnsemblBacteria" id="ADO56582">
        <property type="protein sequence ID" value="ADO56582"/>
        <property type="gene ID" value="PPSC2_12260"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12260"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2598"/>
    <dbReference type="eggNOG" id="COG0464">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000688_25_0_9"/>
    <dbReference type="OrthoDB" id="1115436at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="67"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="267" mass="30049" checksum="B1F070F38CA75311" modified="2011-01-11" version="1">MNNKSKSNAAVRLPRAKGIDMATVYTPKECARKVKRIVLAEKNQTIVDEFITILGMKEKFEEQDVPMPNKIVMFGPPGTGKTLTAFYLAQRLDLPLILVRLDAIIHSHLGETASNVRKIFDYANGTPCVLFLDEFDALGRMRDSNDEVKEMARVVNTLLQCLDEFGGESVFVAATNLEEELDTAIWRRFDTKMTYTLPTHADRIQYIELLIGESLAGQAADLLAGCSFADIEQIMLKAKRKAIIENRALNFENIENALSEYNPRMKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGI3</accession>
    <name>E3EGI3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yjbR</name>
        <name evidence="1" type="ORF">PPSC2_03265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369259.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0639"/>
    <dbReference type="EnsemblBacteria" id="ADO54622">
        <property type="protein sequence ID" value="ADO54622"/>
        <property type="gene ID" value="PPSC2_03265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.630"/>
    <dbReference type="eggNOG" id="COG2315">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105851_5_1_9"/>
    <dbReference type="OMA" id="KVFAWIF"/>
    <dbReference type="OrthoDB" id="1817663at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007351">
        <property type="entry name" value="YjbR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038056">
        <property type="entry name" value="YjbR-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35145">
        <property type="entry name" value="PTHR35145"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04237">
        <property type="entry name" value="YjbR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142906">
        <property type="entry name" value="SSF142906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="115" mass="13482" checksum="523E4C245222CD23" modified="2011-01-11" version="1">MTIEEIIEHCLSYPSSYEDHPFGDGWTAMRHQGNKKIFALIYNHDEHLCVNLKCNPDHADFLRKAFEEVKPGYHMNKEHWNTVILDGDLPEDEIHDMVHHSFKLTKPKSSKKHTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGK5</accession>
    <name>E3EGK5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">5'-nucleotidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-795</name>
        <name evidence="2" type="ORF">PPSC2_03350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'(3')-deoxyribonucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54644.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599451.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16145"/>
    <dbReference type="EnsemblBacteria" id="ADO54644">
        <property type="protein sequence ID" value="ADO54644"/>
        <property type="gene ID" value="PPSC2_03350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.654"/>
    <dbReference type="eggNOG" id="COG4502">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_111510_0_0_9"/>
    <dbReference type="OrthoDB" id="1822108at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008253">
        <property type="term" value="F:5'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009264">
        <property type="term" value="P:deoxyribonucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010708">
        <property type="entry name" value="5'(3')-deoxyribonucleotidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06941">
        <property type="entry name" value="NT5C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54644.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="187" mass="22039" checksum="D6F872C16F65E202" modified="2015-05-27" version="2">MRKPIIAVDMDDTICHLVKRAIYHNNSEFPTHPLHYEDMLDWNTDHLRHPKSTHDVFYGRPGLFEELELYDEYVVEEMEKLCNAFDVIIVTAAEPKTVVEKWNWLQRHMPFIPMENFFPCKRKNLINYDLLIDDGPHNLVPALEDGKKVLCIPHPWNLRAREQYAFPVMASWQGAKERIDSILGVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH93</accession>
    <name>E3EH93_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA polymerase III subunit epsilon</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">polC1</name>
        <name evidence="2" type="ORF">PPSC2_09030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370502.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21500"/>
    <dbReference type="EnsemblBacteria" id="ADO55884">
        <property type="protein sequence ID" value="ADO55884"/>
        <property type="gene ID" value="PPSC2_09030"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09030"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1902"/>
    <dbReference type="eggNOG" id="COG0847">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047806_7_0_9"/>
    <dbReference type="OMA" id="QQMAFIR"/>
    <dbReference type="OrthoDB" id="1985371at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006054">
        <property type="entry name" value="DnaQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00573">
        <property type="entry name" value="dnaq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exonuclease" evidence="1">
        <location>
            <begin position="59"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="245" mass="27409" checksum="28EAE284559623C2" modified="2011-01-11" version="1">MKEPAQGGGFWSALRRGGVPSAIASVMGAPTAQQMAFIRSLTREQRRSEVLRTPLDRLETVVFDLETTGFSAQHGDEILSFGAIRVVGDVIMEKEQFYTLVNPRTEIPEQITRLTGITREMTDGAPPLMNGLHDFMSFVGGRVLVAHASAHDKAFLNAALWKTSKVQLTHRVLDTMMLAKWLEPQQHQTYSLDELLAYQSIPIEGRHHALEDAKMTAKLWVAYVQEMLKRNVTNLADVYAHLSHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH99</accession>
    <name>E3EH99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">YkuD1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ykuD1</name>
        <name evidence="5" type="ORF">PPSC2_09055</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370507.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21525"/>
    <dbReference type="EnsemblBacteria" id="ADO55890">
        <property type="protein sequence ID" value="ADO55890"/>
        <property type="gene ID" value="PPSC2_09055"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09055"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1907"/>
    <dbReference type="eggNOG" id="COG0457">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1376">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_573461_0_0_9"/>
    <dbReference type="OMA" id="WYLLGKE"/>
    <dbReference type="OrthoDB" id="975147at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YkuD" evidence="4">
        <location>
            <begin position="334"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="457"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="476" mass="51891" checksum="88C012C99BA2A0B4" modified="2011-01-11" version="1">MDHSPHLKSYVKKHPDNKMAWYLLGKEYESNGQEGKANYCFNRAGEVFEAFEHKQIPADVWMEYQDKLVQMSKEKERRTARTRHLLTALMVLLLIWVPSANSPSTSPKSASVPSGTEHAAIDHVEVAKVANADPKKRAQNGEPYAGGVFTAQARQGSGAGTALTDMLAKTSQMPSKTTVLGMEQSGAWLIWREGMKPLLSVQNKGNGGLAIQSYDAAACACKPSDSEKLRITGLKWAAGQEELAVLNSAMRAYRSQHQRLPQSLEELTRDFPNNTMYGTTDGMKKAFTPIRNLLASPAQGTGKAGDQNADSAAESSLLLASSLHGRPFLEQPLRIVVDKSKHRLALVSGNILIRNYPIGLGGERTPEGKFVITDKVVNPNGKSNGEFGSRGMQLSATNYAIHGTNEPESIGKNESLGCVRMGKEDVEELFALVPSGTEVVIGNGGLPDQVLVPSSRFTSEPQHDQTNPHKTYHWLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHA1</accession>
    <name>E3EHA1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Dihydroorotate dehydrogenase (quinone)</fullName>
            <ecNumber evidence="15">1.3.5.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">DHOdehase</fullName>
            <shortName evidence="15">DHOD</shortName>
            <shortName evidence="15">DHODase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="15">Dihydroorotate oxidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">pyrD</name>
        <name evidence="17" type="synonym">pyrD1</name>
        <name evidence="17" type="ORF">PPSC2_09060</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the conversion of dihydroorotate to orotate with NAD(+) as electron acceptor.</text>
    </comment>
    <comment type="function">
        <text evidence="3 15">Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(S)-dihydroorotate + NAD(+) = H(+) + NADH + orotate</text>
            <dbReference type="Rhea" id="RHEA:13513"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:30864"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.3.1.14"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>(S)-dihydroorotate + a quinone = a quinol + orotate</text>
            <dbReference type="Rhea" id="RHEA:30187"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:30864"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.3.5.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="15">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; orotate from (S)-dihydroorotate (NAD(+) route): step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7 15">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; orotate from (S)-dihydroorotate (quinone route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Heterotetramer of 2 PyrK and 2 PyrD type B subunits.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 15">Cell membrane</location>
            <topology evidence="5 15">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 15">Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.5.2" evidence="15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370509.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21530"/>
    <dbReference type="EnsemblBacteria" id="ADO55892">
        <property type="protein sequence ID" value="ADO55892"/>
        <property type="gene ID" value="PPSC2_09060"/>
    </dbReference>
    <dbReference type="GeneID" id="66578126"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1909"/>
    <dbReference type="eggNOG" id="COG0167">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013640_2_0_9"/>
    <dbReference type="OMA" id="ERIKMGA"/>
    <dbReference type="OrthoDB" id="1109542at2"/>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00945"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004152">
        <property type="term" value="F:dihydroorotate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004589">
        <property type="term" value="F:orotate reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04738">
        <property type="entry name" value="DHOD_2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00225">
        <property type="entry name" value="DHO_dh_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005720">
        <property type="entry name" value="Dihydroorotate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005719">
        <property type="entry name" value="Dihydroorotate_DH_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001295">
        <property type="entry name" value="Dihydroorotate_DH_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01180">
        <property type="entry name" value="DHO_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01036">
        <property type="entry name" value="pyrD_sub2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00911">
        <property type="entry name" value="DHODEHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00912">
        <property type="entry name" value="DHODEHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 15" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="11 15" id="KW-0288">FMN</keyword>
    <keyword evidence="14 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="13 15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12 15" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHO_dh" evidence="16">
        <location>
            <begin position="52"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="15">
        <location>
            <begin position="118"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="15">
        <location>
            <begin position="254"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="15">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <begin position="69"/>
            <end position="73"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="304"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <begin position="325"/>
            <end position="326"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00004715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00005161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00005359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00011669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF01180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO55892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="364" mass="39327" checksum="77C3BE0FFFC5451D" modified="2011-01-11" version="1">MLYRRIAKPVFFKMSPERAHHVVIDGLKHAGSLPGGAATLRGMYGVKETEDLAVDLFGIHFPNPIGLAAGLDKNAEAVVGFSSIGFGFMEVGTVTPVGQPGNDQPRLFRLPPDEALVNRMGFNNLGAESMAQRLATLKHRPVPIAVNIGKNKVTPNEDAHKDYEKCISALYPYADFFVVNISSPNTPDLRKLQHGSELKSLLEAVRAEMGVQATKYGKAKSVLVKIAPDVSDEELEYMTDAIAASGVDGIIATNTTISRTGLTHRNASETGGLSGKPLRDRSTEVIGRVYRQTEGKLPIIGSGGIFTSRDAYDKIKAGASLIEIYTALIYEGPEVNRAIHAGLRELLRKDGFRHITEAVGAAHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHI2</accession>
    <name>E3EHI2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-ketoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG7</name>
        <name evidence="1" type="ORF">PPSC2_10210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370744.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22680"/>
    <dbReference type="EnsemblBacteria" id="ADO56135">
        <property type="protein sequence ID" value="ADO56135"/>
        <property type="gene ID" value="PPSC2_10210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2151"/>
    <dbReference type="eggNOG" id="COG1028">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010194_1_3_9"/>
    <dbReference type="OMA" id="AMHRTNI"/>
    <dbReference type="OrthoDB" id="1601931at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="27256" checksum="7F30B9D4C0372CAF" modified="2011-01-11" version="1">MTTEGGELKAIGDTTVLITGASGGIGAAIAERFAAVGMNVVIHYMKSHEKANEVARRCMTYSGKVMTVSADLRSKEQIERMREKLDNHGMKPDILVNNAGISHYGLLSDVSEEEWDEVMAVNVKGTFLCTQVFMPHMISQRYGRIVNVSSVWGICGASCEVLYSTTKGGINAFTKALAQEVAPSGVTVNAVAPGAVDTSMLDHLDAGEINSLEEDIPAGRLARPDEISSLVYFLALPESGYINGQVISPNGGWVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EID4</accession>
    <name>E3EID4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Sec-independent protein translocase protein TatC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">tatC</name>
        <name evidence="6" type="ORF">PPSC2_06115</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Forms a complex with TatA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TatC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369879.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19080"/>
    <dbReference type="EnsemblBacteria" id="ADO55247">
        <property type="protein sequence ID" value="ADO55247"/>
        <property type="gene ID" value="PPSC2_06115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1254"/>
    <dbReference type="eggNOG" id="COG0805">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031942_3_1_9"/>
    <dbReference type="OMA" id="HFWKSIF"/>
    <dbReference type="OrthoDB" id="1848013at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033281">
        <property type="term" value="C:TAT protein transport complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043953">
        <property type="term" value="P:protein transport by the Tat complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00902">
        <property type="entry name" value="TatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019820">
        <property type="entry name" value="Sec-indep_translocase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002033">
        <property type="entry name" value="TatC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30371">
        <property type="entry name" value="PTHR30371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00902">
        <property type="entry name" value="TatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01840">
        <property type="entry name" value="TATCFAMILY"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00945">
        <property type="entry name" value="tatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01218">
        <property type="entry name" value="TATC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="66"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="154"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="194"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="218"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="29054" checksum="19A8E9A76865AF05" modified="2011-01-11" version="1">MTPSEHEMPLMEHLGELRRRIIYVLIVFVLALAGGLFAAGSVYNWLIRSGSAKAFQLNAFSFWDGIGIYMKIAMIIGIAVALPFACYQLWKFVSPGLRPQERSATLRYVPYVLLLFMIGAAFAYFIIFPMAIQFTSSVTKSMGLQETYGIAQYFTFMFNIVLPVALLFELPLLIMFLTGIRVLTPMRLRKWRKISYFLLVFVAVVITPPDFISDFLVAIPLLVLYEASVYLSSVVYRKQLRAQEEREAQLRVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EID6</accession>
    <name>E3EID6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Chaperonin GroEL</fullName>
            <ecNumber evidence="6">5.6.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">60 kDa chaperonin</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Chaperonin-60</fullName>
            <shortName evidence="6">Cpn60</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">groEL</name>
        <name evidence="6" type="synonym">groL</name>
        <name evidence="9" type="ORF">PPSC2_06125</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 8">Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6 8">Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the chaperonin (HSP60) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="5.6.1.7" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369880.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19090"/>
    <dbReference type="EnsemblBacteria" id="ADO55249">
        <property type="protein sequence ID" value="ADO55249"/>
        <property type="gene ID" value="PPSC2_06125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1256"/>
    <dbReference type="eggNOG" id="COG0459">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016503_3_0_9"/>
    <dbReference type="OMA" id="TDTDKME"/>
    <dbReference type="OrthoDB" id="265347at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042026">
        <property type="term" value="P:protein refolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03344">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00600">
        <property type="entry name" value="CH60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018370">
        <property type="entry name" value="Chaperonin_Cpn60_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001844">
        <property type="entry name" value="Cpn60/GroEL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00298">
        <property type="entry name" value="CHAPERONIN60"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="SSF48592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="SSF52029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="SSF54849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02348">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00296">
        <property type="entry name" value="CHAPERONINS_CPN60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="29"/>
            <end position="32"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="86"/>
            <end position="90"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="413"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="476"/>
            <end position="478"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="492"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="542" mass="57323" checksum="90E06ECC75D98E9F" modified="2011-01-11" version="1">MAKDIKFSEDARRSMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQALITEGLKNVTAGASPIGIRKGIDKAVKAAVAELQAISKPIESKQSIAQVAGISAADDEVGELIAEAMEKVGKDGVITVEESRGFATELEVVEGMQFDRGYISPYMITDTDKMEAVLDNPYILITDKKITNTQEILPLLEKIVQQGKPLVLIAEDIEGEALAMLVVNKLRGTFNAVAVKAPGFGDRRKAMLQDIAALTGGQVITEELGLDLKTASVDQLGTARQVRITKENTIVVDGAGNKADIDARVSQIRTQLEETTSEFDKEKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGVALLNVYKAVAAVELQGDEQTGVNIVLRALEAPIRTIAANAGEEGSVIVERLKREEVGVGFNAATGDWVNMIEAGIVDPAKVTRYALQNAASVAAMFLTTEAVIADKPEPEKAAMPDMGGMGGMGGMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIE1</accession>
    <name>E3EIE1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Threonine transporter RhtB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lysE3</name>
        <name evidence="6" type="ORF">PPSC2_06145</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_06145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1262"/>
    <dbReference type="eggNOG" id="COG1280">
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    </dbReference>
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    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
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    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
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            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="38"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
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            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="207" mass="22564" checksum="C1885D5ED7CC2089" modified="2011-01-11" version="1">MELQTILAFLGAAIVLTIMPGPDNVFTLTQSIAKGRNAGIFTTLGLCTGLLVHIFAATFGLAAIIYQSSLAFAVIKYAGAAYLLFLAYKSFRAKDTSFELKSGDTLNYKSLYKKGVIMNVLNPKISLFFLAFLPQFVNQGSGNVSTQMLVLGVVFLMQTLVLFILISIFAGKVGSFLRRNPSFSKKINYIQGSLFTLIGLKIAFTQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIK0</accession>
    <name>E3EIK0_PAEPS</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PPSC2_07870</name>
    </gene>
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        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
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        <property type="gene ID" value="PPSC2_07870"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07870"/>
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    <dbReference type="eggNOG" id="ENOG50333X8">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2220574_0_0_9"/>
    <dbReference type="OMA" id="LEYIQGW"/>
    <dbReference type="OrthoDB" id="1946406at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12118" checksum="0C763EC06171708A" modified="2011-01-11" version="1">MGHDISGFNKENKEVVYTRYGSWNEGARYLYRVLDVQLLDGGVSGVGEEIYFDENQIRDAILKSKTIDWSNIEQTEPEYEKDKLAKFLDGLLSIATNEGKVKVYFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIV7</accession>
    <name>E3EIV7_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tlyC</name>
        <name evidence="3" type="ORF">PPSC2_09455</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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        <property type="molecule type" value="Genomic_DNA"/>
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    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21925"/>
    <dbReference type="EnsemblBacteria" id="ADO55976">
        <property type="protein sequence ID" value="ADO55976"/>
        <property type="gene ID" value="PPSC2_09455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09455"/>
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    <dbReference type="eggNOG" id="COG0517">
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    </dbReference>
    <dbReference type="HOGENOM" id="CLU_090663_1_0_9"/>
    <dbReference type="OrthoDB" id="2014094at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="CBS_dom"/>
    </dbReference>
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        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="HTH_11"/>
    </dbReference>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
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        <location>
            <begin position="104"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="169"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55976.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="236" mass="26070" checksum="EF13C795728ACDB4" modified="2015-05-27" version="2">MLKFTDLCSFIMYTTPFHKEVIIIQLSERQREIVDIVQRLAPVTGDKIAEELGLSRPTLRSDLALLVMLGLVDAKPKVGYLPGRYPKYDSHIGSMLKKLTVADILSDPILISGDATAYDAVLMLFQQNTGTLMVTGEEQELIGIVTRKDLLKVMLGHTDLHTVPVTMAMTRRAQMTTLAPGDSLLEAISRLIRHQINCLPVLDEPCTSSAPIQGLVGRVTKTDIMNAILNLTEEKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ21</accession>
    <name>E3EJ21_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370808.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56202">
        <property type="protein sequence ID" value="ADO56202"/>
        <property type="gene ID" value="PPSC2_10505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2219"/>
    <dbReference type="HOGENOM" id="CLU_2155873_0_0_9"/>
    <dbReference type="OMA" id="SIFQWKY"/>
    <dbReference type="OrthoDB" id="2046965at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025441">
        <property type="entry name" value="DUF4181"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13789">
        <property type="entry name" value="DUF4181"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="110" mass="12661" checksum="2164E14A87D81393" modified="2011-01-11" version="1">MSFYLVLFIAAVIQFVLDKIISKTDEKISDTDGFIPYRWFVVIGGIGIFLSLFFVNEPPYKYVWIGVLLIIVFGVRSIFQWKYIRSSQKHITSLLMMAISVVGTIVYVLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ24</accession>
    <name>E3EJ24_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_10520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2233"/>
    <dbReference type="EnsemblBacteria" id="ADO56205">
        <property type="protein sequence ID" value="ADO56205"/>
        <property type="gene ID" value="PPSC2_10520"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10520"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2222"/>
    <dbReference type="eggNOG" id="COG3858">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079050_0_0_9"/>
    <dbReference type="OMA" id="GQKEASY"/>
    <dbReference type="OrthoDB" id="1206229at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168240" evidence="1">
        <location>
            <begin position="25"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="60"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="32985" checksum="467E5A303A9DB7F9" modified="2011-01-11" version="1">MKNIFLSSMLTLSMLLTFAIPLSAAPSIQLVINSEVVHSDAPPVSVAGRTMVSLASLKPLKLNLVWNADKKTVTVNAPGVKEKLVLTIGQKEASYGEKTLTLDVPAQLNKNRVVVPLRFISEAFKAEVEWKADKNTVIIRSADQVETYKKLYQGTDLVAARKIAVDLPSNDENTLHNTEEGVYYQYIFPEGEALRYYYVVGNLYTYYEIKDDVKHLVWEGVEEDSRKKMKEKGKHPSEDKTQYYFLQERVDHSVTYGKVGTEKPVTQVLPKNTTGLADIIVPISGEVRKDRMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ42</accession>
    <name>E3EJ42_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_10590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22985"/>
    <dbReference type="EnsemblBacteria" id="ADO56223">
        <property type="protein sequence ID" value="ADO56223"/>
        <property type="gene ID" value="PPSC2_10590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2238"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_5_0_9"/>
    <dbReference type="OMA" id="DCGMWAA"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="137"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="36813" checksum="0388CF4DE1ABEDDB" modified="2011-01-11" version="1">MGRKLKWGILGTAEIAKIAVIPAIQQSERGEVLGIASRNADKAAEAAREFDIPRSYGSYEELLADPEIGAVYIPLPNHLHEEWTIKAAEAGKHVLCEKPSSLSSAGTSRMIEACRRAGVTFAEAFMYRYHPKHRRIKEIINSGEIGDIRGIHCTFTFNNTDQADNVRFNKSMGGGSLYDVGVYPISAARMYLDREPEAVTVHALFSPEHDNVDMMASGLLEFPGGVNLTFDCGMWAANRSNMEILGSKGTIAMPKMFGWERTSVVPQIFVHVGSVTREERLKGFNSFELQADAFAEAVLDGIPLPYEPEDAVSNMKVIDACIESARSRKRIEIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ85</accession>
    <name>E3EJ85_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Carbohydrate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yulC</name>
        <name evidence="4" type="ORF">PPSC2_11290</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56372.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905734.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23645"/>
    <dbReference type="EnsemblBacteria" id="ADO56372">
        <property type="protein sequence ID" value="ADO56372"/>
        <property type="gene ID" value="PPSC2_11290"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11290"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2389"/>
    <dbReference type="eggNOG" id="COG1070">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039395_0_1_9"/>
    <dbReference type="OrthoDB" id="1619686at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008993">
        <property type="term" value="F:rhamnulokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019301">
        <property type="term" value="P:rhamnose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07771">
        <property type="entry name" value="FGGY_RhuK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013449">
        <property type="entry name" value="Rhamnulokinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02627">
        <property type="entry name" value="rhamnulo_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0684">Rhamnose metabolism</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FGGY_N" evidence="2">
        <location>
            <begin position="3"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="3">
        <location>
            <begin position="253"/>
            <end position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56372.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="491" mass="55367" checksum="5F9C8BE67FBE27FB" modified="2015-05-27" version="2">MSILAYDLGASSGRVLLGKLTDSRIVVEEIHRFSNDPVKVGERLHWDILRLYHEVQQGLLKAKHMGMNPSSLAIDSWAVDFGLIGETGELLGNPYHYRDWHTHGVMEEVQEQLGKEFIFQRTGIQFLTFNTIYQLAAMRNARSPLLEQAEHFLMIPDLLRYFLTGEMYHEFSNATSTQLYHPLQQKWDDELLSGINIPRSWFGEVLEPGSVAGTIRSSAMTDLGIGAIPVIAVAEHDTGSAVAAVPALERSFAYLSCGTWSLMGTETAQPVINDDTLRFNFTNEGGVGRTYRLLKNIMGLWILQEACREWERQGNSYSFPELVHMAEQAPAFTCLIDPDDELFLHAGDMKTRIRQYCRNTGQPLPETPGEITRCILESLALKYRYILELTERVSGQRFNGLHMVGGGIQNRLLCQWTANSIQKPVWAGPAEASAIGNLAVQWMTQGKFADIWEARRVIADSITVEEYESAESEAWEDAYGQFRRVTGLFVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJB5</accession>
    <name>E3EJB5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cysteine desulfurase</fullName>
            <ecNumber evidence="5">2.8.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nifS</name>
        <name evidence="5" type="ORF">PPSC2_11425</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.7" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371007.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23795"/>
    <dbReference type="EnsemblBacteria" id="ADO56402">
        <property type="protein sequence ID" value="ADO56402"/>
        <property type="gene ID" value="PPSC2_11425"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11425"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2417"/>
    <dbReference type="eggNOG" id="COG1104">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003433_0_0_9"/>
    <dbReference type="OMA" id="CLQSANH"/>
    <dbReference type="OrthoDB" id="839689at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016454">
        <property type="entry name" value="Cysteine_dSase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005572">
        <property type="entry name" value="NifS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="4">
        <location>
            <begin position="2"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="384" mass="42597" checksum="904B277EAF9B481B" modified="2011-01-11" version="1">MIYLDYAASTPMCDEALHIYSVMNKEMFGNASSLHDAGGQAAYTLDYSRQRMANMIGGHKEGIYFTTGGTESNMLVVQSILNGLPPHKKHWIMSALEHHSMYNLATFLEHQGYELTIVQPDREGRITREVLVPHLRDNTGLVSVQHANSETGLIQDLAALSPLLHERGIMLHSDAVQTFGNVHIDVEAMGVDALSISSHKVYGPKGVGAAYLKPGTPWRPVYPDTLHENGFRPGTINVPGIAAFVAAAEMMTEQMEMHQERYATLRKYFITKIQERSIPLRWVVEESEKKAVLHHIVGCFFHGYEGQYVMLECNRSGVCISTGSACAAGHHDPSPAIQALGASGREALQFIRISFGRTTTIEELNVLVDILTDLTHRQERSLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJG9</accession>
    <name>E3EJG9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Spore gernimation protein GerC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gerAC3</name>
        <name evidence="4" type="ORF">PPSC2_11965</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKC lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371123.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24285"/>
    <dbReference type="EnsemblBacteria" id="ADO56519">
        <property type="protein sequence ID" value="ADO56519"/>
        <property type="gene ID" value="PPSC2_11965"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11965"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2534"/>
    <dbReference type="eggNOG" id="ENOG502Z9N7">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051140_0_2_9"/>
    <dbReference type="OMA" id="NGWITPI"/>
    <dbReference type="OrthoDB" id="1421701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008844">
        <property type="entry name" value="Spore_GerAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038501">
        <property type="entry name" value="Spore_GerAC_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35789">
        <property type="entry name" value="PTHR35789"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05504">
        <property type="entry name" value="Spore_GerAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02887">
        <property type="entry name" value="spore_ger_x_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0309">Germination</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="399" mass="44484" checksum="06454EE6A8947390" modified="2011-01-11" version="1">MVRQLRVSYVLFIAGLLLTGCVDRTELNELAITTATGIDGHKGDWINTYQIIIPSAMTTGSGGTSSGASQSAVHTFSTHGKTLRETVTKSSLEYPRKLYFAQNNILVIGKKAAEQGIEEIIDIYLRNLDSRETVKVFIANGEARNFLKKLVPPEKIPGQALEKIIERDSKLASIYPAISMYEFISKISSDSAAGVPEISLEGSEPEKLDSVDVFKETSAKNKLKLSGLSIFQKDKRVGFLNEKESIGVSWLNNQIKNTTVNYVDGNVTSAFLIRKAKVKVTPIKNLNHYYLNVDVKATGDLLSASSQREMKDMQSVGQLQMQAAETIKLQIQEGWKALQQKNIDLIGVGNKIHHKYPKDWKKIKETWPEEFANMDIKIGVKMKLARPGLFEKSFNELLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJH6</accession>
    <name>E3EJH6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">msmR3</name>
        <name evidence="6" type="ORF">PPSC2_12015</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371130.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24340"/>
    <dbReference type="EnsemblBacteria" id="ADO56526">
        <property type="protein sequence ID" value="ADO56526"/>
        <property type="gene ID" value="PPSC2_12015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2542"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_1_2_9"/>
    <dbReference type="OMA" id="VYTEFMG"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="332" mass="36946" checksum="2B6A53C0351909A3" modified="2011-01-11" version="1">MATIKDIAREAGVSAATVSRVLNNDLSLSVSPDTKNRIFLIAEQLGYKPSRLRQLKRNTERAGKTVALLLWCSIEEERDDPYYASIRRGIELRCEELGLTLGQTLRGRSSLGTLQKADGLIVVGGVDPEEVSKLYPDKNTIVLVDQYHEQLEYDSVRLHFRQAVDQALGHLLELGHRQIGFIGGKSDGERRAHYFERFMRERGLYNPQFVRVGAWSTADGYLMMNELLAEQERPTACFAASDPLAIGALRALHGHGVKVPEDMAVVGFDDIEMAAFVQPPLTTVRAYPEQMGKAAVQLLSERFEGREPPAYSVIGTKLVIRESSCLNSKINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJK5</accession>
    <name>E3EJK5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetylornithine aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gabT</name>
        <name evidence="3" type="ORF">PPSC2_12155</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371159.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3EJK5"/>
    <dbReference type="STRING" id="1406.LK13_24505"/>
    <dbReference type="EnsemblBacteria" id="ADO56555">
        <property type="protein sequence ID" value="ADO56555"/>
        <property type="gene ID" value="PPSC2_12155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2570"/>
    <dbReference type="eggNOG" id="COG0160">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016922_10_0_9"/>
    <dbReference type="OMA" id="IHPYTNL"/>
    <dbReference type="OrthoDB" id="1322538at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="412" mass="44645" checksum="5B7863E24332B480" modified="2011-01-11" version="1">MHTLTKERFRYGKGITLIDDSGKEYLDGVSGTFNLSLGYNHPHVVAKVQEQVGNLAHMSSSFTEPYVEEVLDHLIQYAPNGIDAGWMRDITGSTANECAVKLAQKYTGATDIISLHLSHHGQTQFATGISGNAFRRKNFPNSTAANSLHVPAPYCYRCPFNSSPDKCGHHCIDAISDAIEYASSGSVACMIIEPILGNGGNIIPPPGYFKRLRQLCDEHGMILIADEVQTGIGRTGYMFASELFDIQPDIITLAKGLGGIGVPVAAVLMQSRLDVLEKHEHSFTSGSNLISVTAAKSTLEVVTEPGFLEAVRSKGDLLGSLLTEMADKHDCIGEARGVGLMWGLEIVDEDDAPNAVKSNGIIDRAFEEQQLILRGSRYGYGNVVKVRPSLTATEDEIVEIVKRLDAVLSTLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJM1</accession>
    <name>E3EJM1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Histidine kinase</fullName>
            <ecNumber evidence="3">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">kdpD3</name>
        <name evidence="11" type="ORF">PPSC2_12225</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371175.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2601"/>
    <dbReference type="EnsemblBacteria" id="ADO56571">
        <property type="protein sequence ID" value="ADO56571"/>
        <property type="gene ID" value="PPSC2_12225"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12225"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2586"/>
    <dbReference type="eggNOG" id="COG2205">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_113_3_9"/>
    <dbReference type="OMA" id="LWATAFQ"/>
    <dbReference type="OrthoDB" id="1293707at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038318">
        <property type="entry name" value="KdpD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025201">
        <property type="entry name" value="KdpD_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003852">
        <property type="entry name" value="Sig_transdc_His_kinase_KdpD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13493">
        <property type="entry name" value="DUF4118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02702">
        <property type="entry name" value="KdpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="398"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="422"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="443"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="472"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="675"/>
            <end position="893"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="898" mass="100859" checksum="A337937E8CC373B7" modified="2011-01-11" version="1">MAAKQNDAGSILNRITDMSVRKRRGRLKIFIGYAPGVGKTCAMLNAAYEEQKEGMDIVVGCVEHDARPYTAALLEGLELLPYIKISSEESSTKEFDVDQALQRSPELILLDDLAHANAAGCRHRKRYQDVEELLRAGIHVYTTMDIQQIESLTDIVYSITGISVEERIPDSVFNRADQVELVDIEPDDLIERFYRGKIYRENENIQAHLFTKEKLTALREIALRNTASQLNRIALQISDQTKTNECNTKEHILVCLSSADSNKKVIRTAARMAAAFHGHFTALFVETQEARELTTKNKSELRENLRLAEQMGAQIATMYGDDIPGQIAEYVKTSHVSKIVLGRSPYKKRGLAKSNVMDKLTTLLPNIEIYIIPSTVPSFYKKMNYYAKYPNLSLADTIKTIAILAVCTVIGLWFKYLEFREANIITVYILGVLLNAIVTKGRMYSAISSIMSVLVFNYFFTEPYYSLQAYDSGYPVTFLVMLAASFMTSTMTMRIREQARQSAHKAYRTEVLLETSRKLQQAKDSPGIINEMAYQLVKLLDRTVIFYSVHQGALLAPQVFSKKESACDPGVYTGGNERAVAEWVYKNNKRAGATTDTFFGAKCLYHAVRGGDQVLAVAAIVMDQEEPLEVFDNSLMLAMLGECALALEKEKLNEKQQEISMQIQQEQLRASLLRSISHDLRTPLTSISGNAGILLGNSEVLNDEQKKGLYTDIYDDSMWLINLVENLLSISRIENGTLNLNFQAELMEEVISEALLHVNRNSVKHVIQTELDDELMMARMDSRLIVQVLINMIDNAIKYTQDGSHITISARRERHRVVVEISDDGPGISSEEVKDRLFDMFYTADNIHGDGRRGLGLGLSLCKSIVNAHGGNIGVKNDVPKGAVFYFTLQAEEVNVHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJP4</accession>
    <name>E3EJP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386056.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0250"/>
    <dbReference type="EnsemblBacteria" id="ADO59642">
        <property type="protein sequence ID" value="ADO59642"/>
        <property type="gene ID" value="PPSC2_26925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5693"/>
    <dbReference type="HOGENOM" id="CLU_2438065_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="90" mass="10518" checksum="F888059073973565" modified="2011-01-11" version="1">MMNRKQLQEWLNQFPEEAIVCTDTNNHYSTDGIRYGTMVECGDENNKLKLLFIGNTRHVGKLIDGEGRFENHEYNLKGLRLLNAVYVKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJV4</accession>
    <name>E3EJV4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386116.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59702">
        <property type="protein sequence ID" value="ADO59702"/>
        <property type="gene ID" value="PPSC2_26625"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26625"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5623"/>
    <dbReference type="HOGENOM" id="CLU_1265922_0_0_9"/>
    <dbReference type="OrthoDB" id="2230627at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="218" mass="24707" checksum="41E07B1C5E8FF779" modified="2011-01-11" version="1">MEKRNWNSDMELCCKATGGAWREFKDSEGVSIGTVAVHPQLKSHAPVITMGTSAQGKYIYISQNDIDFIIACREALPYWLEQVQKERERADAAEMDFKNLQNLMVHKIDINGNGLDFKLSGEAGKFFMYSLVQFFEQNGGKNYLTFDVGMGEHDYSITIQNNLGHSITNQLQEKDAEIARLKKIIKDAHNENERMLQGAGMEEYESALSDLLKEGKEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKD4</accession>
    <name>E3EKD4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0067"/>
    <dbReference type="EnsemblBacteria" id="ADO59461">
        <property type="protein sequence ID" value="ADO59461"/>
        <property type="gene ID" value="PPSC2_27760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5882"/>
    <dbReference type="HOGENOM" id="CLU_882342_0_0_9"/>
    <dbReference type="OMA" id="MENENHL"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="255"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="287"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="315" mass="36542" checksum="F12F2808B9CAEED2" modified="2011-01-11" version="1">MGIVQSAIQEAGNHLVNILFILLMGGSLYLLMKGLISQRKITGLFNLSKVVVKEKTNIKRFNPMFYKKLRQNLTLYYTFKSNKNRADLLYFIIIASEWGLFLAFVFSQKFLLAIIFPILIHWFANKILSLMTINIHFYIEKELPLAIKHLIKSMTKMNDLKLVMLETSNTLQEPLRSYFLELSRKMVTENYEKSLMEFAEDLNDTWIYAFTFLLLSYKEQSKKVDVIQNLSNLAEMMENENHLKEKRLTERKATVILNSCLVVFAVSGLILNLIFNKYAVEFFFNTFAGMLLLIVGVSAIMGTFIINLMLSKKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKP1</accession>
    <name>E3EKP1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385906.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59492">
        <property type="protein sequence ID" value="ADO59492"/>
        <property type="gene ID" value="PPSC2_27620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5851"/>
    <dbReference type="eggNOG" id="ENOG5030HRY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1979360_0_0_9"/>
    <dbReference type="OrthoDB" id="2063885at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="13867" checksum="E73E8B2887571713" modified="2011-01-11" version="1">MNNNSQIYNKNVMGKVGGLDLVQLSGKEEFVMNARGGKVYKDITKHSYLEIPKAGKVYDALSVGKHGAEPIITVSLNNEIQVFRLPSAFEGWVNQITALSLSGTKMFPGRVEFGKRDDGSEYAEIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKV2</accession>
    <name>E3EKV2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59553.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886167.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0160"/>
    <dbReference type="EnsemblBacteria" id="ADO59553">
        <property type="protein sequence ID" value="ADO59553"/>
        <property type="gene ID" value="PPSC2_27330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5784"/>
    <dbReference type="HOGENOM" id="CLU_158472_1_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024414">
        <property type="entry name" value="Uncharacterised_PrgI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12666">
        <property type="entry name" value="PrgI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59553.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="102" mass="11664" checksum="383E0FC816FD5990" modified="2015-05-27" version="2">MRNYQIPPDMNEKEKVIGGILNINQFFWVLAGLLIGAGAFAIFVKLFGGVIALILAIPICLIGTPFAIYKKNELTLYQYLSYKRKFKKKTHKLANIQKEVRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKV4</accession>
    <name>E3EKV4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Conjugal transfer protein TraC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_27320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="3 4">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
            <plasmid evidence="3 4">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59555.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0162"/>
    <dbReference type="EnsemblBacteria" id="ADO59555">
        <property type="protein sequence ID" value="ADO59555"/>
        <property type="gene ID" value="PPSC2_27320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5782"/>
    <dbReference type="eggNOG" id="COG3451">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009097_4_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043964">
        <property type="entry name" value="P-loop_TraG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19044">
        <property type="entry name" value="P-loop_TraG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0614">Plasmid</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="P-loop_TraG" evidence="2">
        <location>
            <begin position="237"/>
            <end position="600"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="91"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59555.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="632" mass="71835" checksum="5AB0CA5353A8C664" modified="2015-05-27" version="2">MNAKEKPSQKSMSEVSVLGKGIRTVKDLFAPPSFDRGNESYMKVGNKYVRSFIMNGFPANVSVGWLDQLFNYDGDMDTAIYVEPTDERTALDELTAKITQFEAQLQMEYQKGNIKNITRLKNNVTQLYDQRERLERNYENLFHVQIASNLYTDSVEELEKETQKLDNKLKGRKIFHMPVYLRQDDGYKTVLPFGKSYIPDKFRNFNSGALTACFPFYNSEISHATGVFLGVNISTMTPMLVDFYDRDKLLNGNLTVFGQAGSGKTFLVSMLTLRSALKGVRTVIIDPEGEYKKLTKAVGGSHIYIAPDSRTHINPFDLEESELTDEEIAEGKPEVDIKGKVSDVLNLIAVMAGGLNREEQSSVSSIINEVYQDQGFNETRQSLYVTEPIFNEDTGEFYHDGVKKPMPTFSTFHNKLVQWANEKNNDRLTRLANALNMFKKGGVYDMFDCQTSDDLKDFKNSPIVTFDISRLEESVLRPIGMYIALSWTWEKFIKKNPEIKKRIVCDEAWMLVNKNMAGFEYTAQFLENAARRIRKRNGGLLVASQNFVEFANNDQGKAVLTNAVTNIFLRQDATDIDAVQDTFKLSDGERNFLLSAKKGEFLIKMNGESSVAYAMSFPYEKELISKAYVSKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBW0</accession>
    <name>A0A0D5ZBW0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599976.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02005"/>
    <dbReference type="EnsemblBacteria" id="AKA44265">
        <property type="protein sequence ID" value="AKA44265"/>
        <property type="gene ID" value="PPSC2_14345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3062"/>
    <dbReference type="eggNOG" id="COG3595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_093456_0_0_9"/>
    <dbReference type="OrthoDB" id="1479593at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="260" mass="28639" checksum="7831918269A7FBF9" modified="2015-05-27" version="1">MDTEFSKSEASFKGAHHSQNDVNGAIGLLGTSSHKNGPSKNSNAPTGVWKVGRLSMGLFLVLLGGVTFASRFWGAGILDQALTWWPVVFVLLGLEILMYTAWKGTRERIRYDLFSMFITAVLVFCCIGFALVSSLGITPQVREIMSSVQETRILPDWHEKLPAGVTKVIVQGEDPYAVKIDATTSPEVHVFGSYVYTGNEDDFKGTELYQTKHIGDTLYVLLSQVPTRFMQTHHQLDVTIAVPEGIAVTVRDSQGNVIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCJ4</accession>
    <name>A0A0D5ZCJ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44304">
        <property type="protein sequence ID" value="AKA44304"/>
        <property type="gene ID" value="PPSC2_20650"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20650"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4405"/>
    <dbReference type="HOGENOM" id="CLU_2899965_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="62" mass="7275" checksum="36378C5F513DCDA8" modified="2015-05-27" version="1">MIPLITPPILFTGMDERGTNYIHKSTYKQTGNDTHPDHSILKVMESLFFYFNILFTKKQHSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-02-26" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCS5</accession>
    <name>A0A0D5ZCS5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_25980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44337">
        <property type="protein sequence ID" value="AKA44337"/>
        <property type="gene ID" value="PPSC2_25980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5464"/>
    <dbReference type="HOGENOM" id="CLU_1946676_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14637" checksum="48ABD4BDAE0FEF28" modified="2015-05-27" version="1">MIQVRKGMRDMSDKNEVFDDIGEYINRQIADGSINEKGSPLKCHHCDSTNTNIQYFYHEHAVKELVIYLFTTIVFVPLVCLVLVCSLPVVLSGLVKYEDQITQPPIEQLDLMVHDSHGVKKVGAVTKFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCU3</accession>
    <name>A0A0D5ZCU3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0183"/>
    <dbReference type="EnsemblBacteria" id="AKA44376">
        <property type="protein sequence ID" value="AKA44376"/>
        <property type="gene ID" value="PPSC2_27215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27215"/>
    <dbReference type="HOGENOM" id="CLU_2220583_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12332" checksum="D62DF575E0AE3F5C" modified="2015-05-27" version="1">MIFMTLLLLKWRKNSLESEHSKGREGKTYHNGKGEQRTVILIHRNGKDGVLFYNKEHDNGWYLMTLLGFAKWAKGEVLGRSYSHEKETSKERNKEMGADYRAGDRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3E499</accession>
    <name>E3E499_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_12540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56639">
        <property type="protein sequence ID" value="ADO56639"/>
        <property type="gene ID" value="PPSC2_12540"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12540"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2660"/>
    <dbReference type="HOGENOM" id="CLU_1081179_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="257" mass="29644" checksum="C983DBD77A8F3E89" modified="2011-01-11" version="1">MKKIGTEDKSVKIQLLVLIISIGGVVLATFISVFAVLRLKKSHQTASDEQKNSRKVNLAIPSKTFEVELHQSLFQDWGSGVKESSFQDDKSSVYLEVYNHGNIPAENVMVEIAVDFDELNDFMKDHTAFNDEDNHSFYLSEEEEKVVISFNKVENIKHEISFHLEELGTIHPVGAEKHGIKIHLPRWYIYLLNIKAFNENLDLFSLNIILVYKDPNNESKLCTEEFLIEPEIHMAKREEEHSNNKVKYRIKGELIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4D5</accession>
    <name>E3E4D5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pocR1</name>
        <name evidence="3" type="ORF">PPSC2_12685</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2708"/>
    <dbReference type="EnsemblBacteria" id="ADO56675">
        <property type="protein sequence ID" value="ADO56675"/>
        <property type="gene ID" value="PPSC2_12685"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12685"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2697"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4936">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036605_0_1_9"/>
    <dbReference type="OMA" id="VICEENS"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018771">
        <property type="entry name" value="PocR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10114">
        <property type="entry name" value="PocR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="163"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="30377" checksum="26D8D8E3638DAA71" modified="2011-01-11" version="1">MNEPYVYLCHFNIIDIAIPITIDGKYIGAVMAGQVKLADPDKGTHLEQIVSSKNVPMHEAKLQELQDDYEQLPVMTYEEIVKISNMLSPLCNYIVEEALNKNLLVEMFEKASGSQESVNLSTILPGYSIRNIESIKKEMTNAIADAYLKNCPSDNACTSPALQPAFEYIHSHKSEQVTLKHMADLCHLSPSYFSRLSAKETGENFTTYLAKLKIKWAKQLLEVTDMPISQISDELGFNESGYFIKIFKKFEEITPALYRKYIQEQSVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4H2</accession>
    <name>E3E4H2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371474.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01320"/>
    <dbReference type="EnsemblBacteria" id="ADO56871">
        <property type="protein sequence ID" value="ADO56871"/>
        <property type="gene ID" value="PPSC2_13630"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13630"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2900"/>
    <dbReference type="eggNOG" id="ENOG502Z8SC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_397311_0_0_9"/>
    <dbReference type="OMA" id="EWLYIRR"/>
    <dbReference type="OrthoDB" id="124524at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="270"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="309"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="397"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="507"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="660"/>
            <end position="681"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="694" mass="80730" checksum="84FAB0A9929FBFF8" modified="2011-01-11" version="1">MSLKEILLWVLLISGGGFAVLYTVLYGLHKHKSYAVRRGRIHSVQEARKGKAVLQRELQTLMHKLYTLCMRVPITSGYITSVRKRLAGQHAYDEYKLRLQTMKMILFIWGIFVCSGVVLLMMKPGIEFAILAVLCGVVINSLVIDVATSQMEKRLLSQMIELFANVRHHYHQHGMVEESISEAADLAGAEAGRHARLIHEALTDADPHEALERYYESAPNRFLKAFAGISYMVMEFGDRVEDGGSIYLKGLSSLAREIQLELLRRNKLDYLLKSLNVIALAPVFFTTPIERWARSSFPSMDEFYQGKLGYITKLTVYIVIILSYFLLQKLQQSDETGYRAGKGRRVWEQKLYRLPIIRNMVDSLIPRQHMTSYSQITRLLKESGAEVKLEWLYIRRIALFILGLVLSISTIFILHEAEKTHILHAPVQSGQMFGRLSPIEEKEALKQSEIDRKIIQTLNMKADSTYERAYAALEHYANGTATPEQLSRNTQRILQKLKDWNEEYIKWWEVLISIVAGYVAYQMPMLLLYLQRKMRYLDMKHEVYQFQTVISILRVMERMSVEEILEWLNRFSVIFKRPLQKCLLHYEHGPEAALDLLKEEAPLPEFQRLVDKLYLSLGKITIREAFDDLESQMTYYFEQRKQEYEKIIDSKAIWGRMIGFAPMYGLIFLYLVIPLIGMSFVQMDSYYEQIQKIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4J0</accession>
    <name>E3E4J0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371492.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01405"/>
    <dbReference type="EnsemblBacteria" id="ADO56889">
        <property type="protein sequence ID" value="ADO56889"/>
        <property type="gene ID" value="PPSC2_13715"/>
    </dbReference>
    <dbReference type="GeneID" id="66577236"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2918"/>
    <dbReference type="eggNOG" id="ENOG50337FU">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_131494_0_0_9"/>
    <dbReference type="OMA" id="ERKVRKN"/>
    <dbReference type="OrthoDB" id="1662909at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="19245" checksum="7EEB484D93E1EB13" modified="2011-01-11" version="1">MARSFERKVRKNTAHLNKTRKKQGIQTINGAGSAMDIFRGRNITVPIMLAGLAVLYMLMSYFLTKTGMRGMDWLVFGLYLMLAVIFFIRRPYLKVGKDTLYMLKGGRERPMTAGDMKAIKIEKGYVTVERKGKGGNFIFTKSLGRYDTDAIAERLEKFALSNQIQVDKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4J3</accession>
    <name>E3E4J3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">LexA repressor</fullName>
            <ecNumber evidence="12">3.4.21.88</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 16" type="primary">lexA</name>
        <name evidence="16" type="ORF">PPSC2_13730</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>Hydrolysis of Ala-|-Gly bond in repressor LexA.</text>
            <dbReference type="EC" id="3.4.21.88"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="12">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 12 13">Belongs to the peptidase S24 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.88" evidence="12"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013310545.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01420"/>
    <dbReference type="MEROPS" id="S24.001"/>
    <dbReference type="EnsemblBacteria" id="ADO56892">
        <property type="protein sequence ID" value="ADO56892"/>
        <property type="gene ID" value="PPSC2_13730"/>
    </dbReference>
    <dbReference type="GeneID" id="66577233"/>
    <dbReference type="KEGG" id="ppm:PPSC2_13730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2921"/>
    <dbReference type="eggNOG" id="COG1974">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066192_45_0_9"/>
    <dbReference type="OMA" id="HVWLLPH"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06529">
        <property type="entry name" value="S24_LexA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00015">
        <property type="entry name" value="LexA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006200">
        <property type="entry name" value="LexA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039418">
        <property type="entry name" value="LexA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006199">
        <property type="entry name" value="LexA_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006197">
        <property type="entry name" value="Peptidase_S24_LexA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015927">
        <property type="entry name" value="Peptidase_S24_S26A/B/C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01726">
        <property type="entry name" value="LexA_DNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00717">
        <property type="entry name" value="Peptidase_S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00726">
        <property type="entry name" value="LEXASERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00498">
        <property type="entry name" value="lexA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12 13" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="4 12" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 12" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3 12" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 12 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 12" id="KW-0678">Repressor</keyword>
    <keyword evidence="11 12" id="KW-0742">SOS response</keyword>
    <keyword evidence="9 12" id="KW-0804">Transcription</keyword>
    <keyword evidence="7 12" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="LexA_DNA_bind" evidence="15">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S24" evidence="14">
        <location>
            <begin position="88"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="12">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="active site" description="For autocatalytic cleavage activity" evidence="12">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <feature type="active site" description="For autocatalytic cleavage activity" evidence="12">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage; by autolysis" evidence="12">
        <location>
            <begin position="95"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF01726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO56892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="208" mass="23166" checksum="A5001426518684DB" modified="2011-01-11" version="1">MSKISSRQQAILEFIRNEVRLKGYPPSVREIGEAVGLASSSTVHGHLDRLEKKGLIRRDPTKPRAIELLGQDESDNSNLINYSISRVPVVGKVTAGLPITATENIEDYFPLPQHFVGEDKIFMLSVVGESMIEAGIANGDYVIVRQQQTADNGDIVVAMTDEDEATVKTFYKEKDHIRLQPENPAFEPLRLTHVSILGKVVGLFRDFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4N0</accession>
    <name>E3E4N0_PAEPS</name>
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        <submittedName>
            <fullName evidence="6">Glycosyl transferase family 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_13890</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2968"/>
    <dbReference type="EnsemblBacteria" id="ADO56929">
        <property type="protein sequence ID" value="ADO56929"/>
        <property type="gene ID" value="PPSC2_13890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2967"/>
    <dbReference type="eggNOG" id="COG0488">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_36_3_9"/>
    <dbReference type="OMA" id="SVGQRYR"/>
    <dbReference type="OrthoDB" id="1112046at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
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    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
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    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
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    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="310"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="237"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="237"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
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        <location>
            <begin position="342"/>
            <end position="349"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO56929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="495" mass="56868" checksum="6B72842AF736AFD2" modified="2011-01-11" version="1">MPAIQVTNLTFAYPGSYDPIFENVHFQIDTDWKLGFTGRNGRGKTTFLNLLQGKYEYSGTISTPVAFDYFPFPVEHPEYLTLDVVEEIVPSYENWKLMRELNLLKVSEDVLYRPFESLSQGEQTKVLLAVLFIQDNRFLLIDEPTNHLDLHARKLVADYLNTKRGFILVSHDRAFLDRCVDHILSINKTNIEIQKGNFSSWWTNKTRQDTFEMAQNEKLYKDIQRLSASAKRTSSWSFETEKSKNGTRNSGSKLDKGYVGHKAAKMMKRSKSIEQRQHTALEEKSKLLRNIEQSESLAISQLVYPKSELAILDHVTIYYGERAVCKNVSLMIEPGDRIAISGPNGSGKSSLLHLLNAEELYYTGTFQRDPQLRVSYVSQNTSDLRGTLSDYAAEHRIDESLFKAVLRKLDFARIQFEKDISAFSGGQKKKVLIARSLCEEAHLHIWDEPLNFVDVISRMQIEELLLEYTPTIVFVEHDREFHDRVATKTIELGGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4X1</accession>
    <name>E3E4X1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02330"/>
    <dbReference type="EnsemblBacteria" id="ADO57099">
        <property type="protein sequence ID" value="ADO57099"/>
        <property type="gene ID" value="PPSC2_14695"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3136"/>
    <dbReference type="eggNOG" id="ENOG5032Y6J">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_186076_0_0_9"/>
    <dbReference type="OMA" id="MEALMKM"/>
    <dbReference type="OrthoDB" id="1942398at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025942">
        <property type="entry name" value="SpoVIF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14069">
        <property type="entry name" value="SpoVIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="9933" checksum="01A3C5FB8E7528A7" modified="2011-01-11" version="1">MSKNFPKDALKAINKKGGKNISENAVKKLAGTVKPDTLQSETQLRQLIKQVSAMANIPVSEDTVRDIVGAVKKSGMNPSNMEALMKMMMKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E513</accession>
    <name>E3E513_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PalA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">thuA</name>
        <name evidence="2" type="ORF">PPSC2_15265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371811.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02885"/>
    <dbReference type="EnsemblBacteria" id="ADO57221">
        <property type="protein sequence ID" value="ADO57221"/>
        <property type="gene ID" value="PPSC2_15265"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3260"/>
    <dbReference type="eggNOG" id="COG4813">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084426_0_0_9"/>
    <dbReference type="OMA" id="WNEFRHE"/>
    <dbReference type="OrthoDB" id="1452706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029010">
        <property type="entry name" value="ThuA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009381">
        <property type="entry name" value="Trehalose_catabolism_ThuA_prok"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06283">
        <property type="entry name" value="ThuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF030013">
        <property type="entry name" value="ThuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ThuA" evidence="1">
        <location>
            <begin position="29"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="27379" checksum="EC9C68C07A5E728F" modified="2011-01-11" version="1">MINVTIWNEFLNEKLNEEAKRIYPNGIHQALADGLADEGFAIRTATLRENAEHGLEEEILNSTDVLLWWGHKAHDQVSDEVTARVVKRVQEGMGLIVLHSGHFAKPFKALMGTSCDLKWRVAGEQEIIWSVNPSHPIAEGIDGKILLEQEEMYGEFFDIPAPDELVFISNFEGGEVFRTGCTFHRGSGKIFYFRPGHETYPTYYQPDILKVIANSIRWASPTSNKKPVYGRSEPVRPLGGVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E533</accession>
    <name>E3E533_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sugar transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rhaT</name>
        <name evidence="8" type="ORF">PPSC2_15360</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GRP transporter (TC 2.A.7.5) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371831.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03010"/>
    <dbReference type="EnsemblBacteria" id="ADO57241">
        <property type="protein sequence ID" value="ADO57241"/>
        <property type="gene ID" value="PPSC2_15360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3281"/>
    <dbReference type="eggNOG" id="COG4975">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076024_0_0_9"/>
    <dbReference type="OMA" id="FCISMIS"/>
    <dbReference type="OrthoDB" id="778970at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015144">
        <property type="term" value="F:carbohydrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010651">
        <property type="entry name" value="Sugar_transport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16119">
        <property type="entry name" value="PTHR16119"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06800">
        <property type="entry name" value="Sugar_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="173"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="232"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="266"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="285" mass="30235" checksum="0FE85B7C66D2C58F" modified="2011-01-11" version="1">MDTLIAFIPAIGWGFMPILAQLTKASPREQLTGTVIGAVLFALCLYSYSPVNFQVTPFIVSFVSGVFWSVGQLLQFQAFQKVSVSTAIPIICGLQLMGTTLFAALILGEWTTGYQIGIGSAALIFILSGILLTSYQGRSSGLSKPLPLQILVMLVCSGIALTLYVIINQIFHVSGLSVILPQSLGMLCSALLMNCKGGQKLHLVQVLRNLSTGLSWSVANLALFISNGLIGVAASFPISQASIAISCVGSILIFREKKSPGEWLRLLAGITVIMVGVGLISLVKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E585</accession>
    <name>E3E585_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16330</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372031.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3489"/>
    <dbReference type="EnsemblBacteria" id="ADO57445">
        <property type="protein sequence ID" value="ADO57445"/>
        <property type="gene ID" value="PPSC2_16330"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16330"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3486"/>
    <dbReference type="eggNOG" id="ENOG502Z9U2">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051351_0_1_9"/>
    <dbReference type="OMA" id="WNFDIVP"/>
    <dbReference type="OrthoDB" id="1258110at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="333" mass="38381" checksum="F5BAE69F30BA2053" modified="2011-01-11" version="1">MATTVNTAFSEFMRDTVNLDSEVTKTARRSRDWLIGQIDKFDSKIGFPTLYNDIDIHFGSFARKTKIRELNDIDLIIGLRSQGSTYLQDSWGRIEMTVPDTATDLMKLCHDYTNKLNSRKVINKFISELSTIPQYKKAEIKRNLEAATLELTTHPWNFDIVPSFITVPESDGRTYYIIPDGKGHWKKTDPRLDRSNISRINQKHNGKILNVIRLIKYWNNRPTMPSMGSYLLECMLLSYYDNKDTVSDFVDIEARNIFAHISSAIYNNVYDPKNIQGNLNNLSFDEKQKISAKAHFDHRNALEASQFEGDGDHKSAIIKWRGIFGSAFPEYTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5A2</accession>
    <name>E3E5A2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372048.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3506"/>
    <dbReference type="EnsemblBacteria" id="ADO57462">
        <property type="protein sequence ID" value="ADO57462"/>
        <property type="gene ID" value="PPSC2_16405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3503"/>
    <dbReference type="HOGENOM" id="CLU_2618664_0_0_9"/>
    <dbReference type="OrthoDB" id="2013414at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="83" mass="9430" checksum="D551A609A4401C76" modified="2011-01-11" version="1">MQIIHKLTVVSNPTRVFEVGTELDDREVIEIRPVGTEFENSIHSEFTIHDENGDLIASIENAPVIVEYRQIAEHDEVETVEGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-08-12" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5A5</accession>
    <name>E3E5A5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">XRE family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">prtR</name>
        <name evidence="2" type="ORF">PPSC2_16420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57465.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3509"/>
    <dbReference type="EnsemblBacteria" id="ADO57465">
        <property type="protein sequence ID" value="ADO57465"/>
        <property type="gene ID" value="PPSC2_16420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3506"/>
    <dbReference type="eggNOG" id="ENOG50339CP">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_187608_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57465.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="86" mass="9703" checksum="13D0A2DB0849C63A" modified="2015-05-27" version="2">MKFGAIMQACRVRAGLSQEEMAELLNRTQSCISKIENDHKIPDMTTLLRWVEVTGTREVLVAFLYGMDGLRMIQNIVTMIGGTRTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5D9</accession>
    <name>E3E5D9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17310</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372239.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3703"/>
    <dbReference type="EnsemblBacteria" id="ADO57658">
        <property type="protein sequence ID" value="ADO57658"/>
        <property type="gene ID" value="PPSC2_17310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3699"/>
    <dbReference type="eggNOG" id="ENOG5030MSX">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082405_0_0_9"/>
    <dbReference type="OMA" id="NDIKGGG"/>
    <dbReference type="OrthoDB" id="921918at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="292" mass="32631" checksum="453106DF25E0D7CA" modified="2011-01-11" version="1">MNFEPLRAQQAVLSSGSLRIDPASKQVLSPQLHEEKLSRFVVQDTVEISEAGRKLAEGAIVSHAAKYFGTTQINDALNRVLEDQPEEVSNAVYNMIQSNFIVDGTVTDEKQRAVLLEMGVSQSKYIADRYMEGDKAKEFMKTMNQIAGIALTRTMDSETGDISYTTPADRPIGAPEDYVKLSEVMKQVDPQKYTAFMNDIKGGGNGLSQLLSFAQKVPQNPDWINKYKERTEQTEELLNKPQLTNQFDKADTSSASAFMNSMQNLLKESSPAQDSYMQNMRGFFRNLGVQVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5E0</accession>
    <name>E3E5E0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YlqB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ylqB</name>
        <name evidence="2" type="ORF">PPSC2_17315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372240.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57659">
        <property type="protein sequence ID" value="ADO57659"/>
        <property type="gene ID" value="PPSC2_17315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3700"/>
    <dbReference type="eggNOG" id="ENOG502ZAFH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_551900_0_0_9"/>
    <dbReference type="OMA" id="ESAFHAY"/>
    <dbReference type="OrthoDB" id="284125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008969">
        <property type="entry name" value="CarboxyPept-like_regulatory"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49464">
        <property type="entry name" value="SSF49464"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168171" evidence="1">
        <location>
            <begin position="27"/>
            <end position="488"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="488" mass="53557" checksum="2AC26830FD66EBD6" modified="2011-01-11" version="1">MKRFRKAISVMLSLMLLFAFGMTANASQGTELNKEKQAIEADSSFQLTTNNEDVIERLTRVDKPEGITSSVYNMQENINFKAPETFSLKRETLPSLKASPTAATASSATYSGTITEEGGTQFLYPIYVKPGELLQAQLDGPFSEQLDYDLYLYEFDMTTGDINPNAIDASTYGTYFNKYEQGSASLPENVGSRNATGSEKAYAVAVHSKKGSSINDPFYLTVDVNSQYDAYEPDESAFHAYNFTFSTGGSTLNSRSIHSGIDNDWYQITIPANRNYDGLNVKLDSTSESYGYKAEVYGALSGNQMALLPQTNHNVTLNTGTYYVRVYTTNQYSPDHLYALTLKPVLRAGKIVINGYDSKNGPNDYPSYSYGRHYRVNGNTSLTVKGVVTTTDNYPVANAPVNVTWLNQNWTESSGNRTRTGTGYTDQNGAFSVTLSLPHSTGSIAEYLSGPISFTHYYDLSGVAAQVSGTSLTATDIVYHFAYSIYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5K2</accession>
    <name>E3E5K2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yxbF</name>
        <name evidence="3" type="ORF">PPSC2_17615</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57721.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324596.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04950"/>
    <dbReference type="EnsemblBacteria" id="ADO57721">
        <property type="protein sequence ID" value="ADO57721"/>
        <property type="gene ID" value="PPSC2_17615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3764"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_087539_0_0_9"/>
    <dbReference type="OrthoDB" id="1437290at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039532">
        <property type="entry name" value="TetR_C_Firmicutes"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14278">
        <property type="entry name" value="TetR_C_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57721.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="22128" checksum="35D28090F16C5023" modified="2015-05-27" version="2">MDRRIQKSRQAIIDAFMRLMSEKEFERITINQIAEEANVNRGTVYLHFADKYDLRDQCMEAQIKELLRNCMSEDNFFHLPSKTALLRTFEYLEQHASFYSIMLTNKGSTVFRNQIETMFRQSLCKHLDSINLDQDMNRDITVQFLISAAVGVLEWWITRSVPYPASVIVEQFWKLLNCGVEGNEPTSSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5R0</accession>
    <name>E3E5R0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372516.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57937">
        <property type="protein sequence ID" value="ADO57937"/>
        <property type="gene ID" value="PPSC2_18590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3983"/>
    <dbReference type="eggNOG" id="ENOG50303J5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_120450_0_0_9"/>
    <dbReference type="OMA" id="FLAQPPM"/>
    <dbReference type="OrthoDB" id="1833164at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="195" mass="21988" checksum="6BC27C31FBCD4248" modified="2011-01-11" version="1">MLYRGTARRKGSSHQRLHAETLRKISAVMLPFYKAIATQRAFAVQWSRAVVQGNLDRMKSLLCSVAPFAAKQGLGTNGIGYFVSFLAQPPMLYYTNGTTIPPGTVQFTFEPKVHRALAKTVFPLYRELARNECFASALAKAINRQDQRAVHVMIRSLIPSSALKSVDIEDGGFALLFKYPFSKYPYRNLLFREFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5U1</accession>
    <name>E3E5U1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Molecular chaperone</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57968.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324639.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05935"/>
    <dbReference type="EnsemblBacteria" id="ADO57968">
        <property type="protein sequence ID" value="ADO57968"/>
        <property type="gene ID" value="PPSC2_18720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4012"/>
    <dbReference type="eggNOG" id="COG0443">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_331729_0_0_9"/>
    <dbReference type="OrthoDB" id="117903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57968.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="883" mass="101206" checksum="F7D720F7CA61FDEB" modified="2015-05-27" version="2">MNGPYTYRLLDPLTDRKNARFTTKYTRAELEQMTTFQLRGICDKERLVEGFANRLAREELIRVILRFRSAEEHLLITRPNPGGFERMQSALQRNWNDRRQESGGIRVPAKITLYQGVRTGRMDNYRIESDLPWLSSSNVLLVNATGELCGVLNLVKDEGRTGVYYLSRHRDAELRETSNHSYSLLFLRRQESEYFYNLYYGDKPMLPLKLQGHRIPVAELIIRGTETTDAVLAIDFGTSNTTAGAYLDSSYVTAPDTGMSSTVRLDAINYVSFPGPEGTEGDWIEVLPTVIRVADCSNPEHIVYAFGEEALRGSDVAGSRATVLRGIKRWVNDYKRIEELMDSEGNTATASRSDILAAFIRYVIATAEQQFKCRFRNLHFSAPVKLQPQFIEMFSDILPDYRIEAEDALDEGLAVLYNTLADQMERGTFADGEEYQALVIDCGGGTTDLSSCRFRIEDGRIAYKLDIHTTYENGDTNFGGNNLTYRIMQFMKIVFAGYYAAETRLPDTDIDALIGIPSGDLYRHVDEFGVDAVYAGLEEHYRDAEAILPTAFKRYEHATRDEYQRVLSNFHLLWSAAENMKKEFFLRTGILRSRFESEQVLSAESDLNIAVMDRWLVSVIENGRFRDEYGLPDVVFNIREVQQLLKADIYNIVRKFLDDFYLEGRLQDYSIIKLTGQSCRIDVFREALKEFVPGRSIEFRQKAEDLSRVPELKMACLRGAIRYLNAKKMGTIEPVITNHIPAIPYTVSAWTHTGREKELIASLESSRVRGSISRPSQAVEVEFFLTANGGKLRQRHVYRSRPDAFEPMPYEEIAELYGRDIPQDDTDSIRNEETKYFVFVGDSRWGFYVVPITRRDELLYLGPKRFFAFENDLSELDFFDGTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5W2</accession>
    <name>E3E5W2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YheG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yheG</name>
        <name evidence="2" type="ORF">PPSC2_19795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58181.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886039.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07015"/>
    <dbReference type="EnsemblBacteria" id="ADO58181">
        <property type="protein sequence ID" value="ADO58181"/>
        <property type="gene ID" value="PPSC2_19795"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19795"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4219"/>
    <dbReference type="eggNOG" id="COG0702">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_025711_4_5_9"/>
    <dbReference type="OrthoDB" id="948454at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="7"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58181.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="211" mass="23378" checksum="82D2C73788CF7924" modified="2015-05-27" version="2">MNLLLLGATGRVGRFILDYALTDGHTVTALVRSPDKLEDFESQCGTQLQIVQGDATNAKDIAQALKGGPAVVISALNTDGTTTLSVSTGLLIRLMQEQSIHRLITVGTAGILQSRTEPSLYRYESSDTRRRSTRAAEEHRRVYELLRESALDWTIVCPTYLPDGGRTGVYRVEKDFLPEDGSQITTADTADFTYRQWKSCDFIRTRVGIAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E601</accession>
    <name>E3E601_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YhcN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yhcN</name>
        <name evidence="3" type="ORF">PPSC2_19980</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372792.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07200"/>
    <dbReference type="EnsemblBacteria" id="ADO58220">
        <property type="protein sequence ID" value="ADO58220"/>
        <property type="gene ID" value="PPSC2_19980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4257"/>
    <dbReference type="eggNOG" id="ENOG5032V70">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077663_0_0_9"/>
    <dbReference type="OMA" id="PAPMNHR"/>
    <dbReference type="OrthoDB" id="1928970at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019076">
        <property type="entry name" value="Spore_lipoprot_YhcN/YlaJ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09580">
        <property type="entry name" value="Spore_YhcN_YlaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168016" evidence="2">
        <location>
            <begin position="30"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="144"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="299"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="144"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="209"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="303"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="327" mass="34855" checksum="FD9537A3F6279317" modified="2011-01-11" version="1">MPGTKKVISFTISAALLASMAALTGCGNADHNVRTNSTRYNAQSTQHMDGVNRYGLDGVNRMDGVNRYGVKSNGMDGMSLNENGNRTGHPIRNLQVDRNLSKRISEMPDVKSATVLVGERHAYVAVSLKDQANGTGVGAPSIDGTPSANNIGRNGNVPSVNGVNGTRGNRTTGTTTPGMTDNGVTGNGTPARRDDGLFGTMGTGSYGMLRGLTDNNNRTDNGNNTIEGARTAYEPTDAVKSRIANKIKQFAPSIEQVHVSANPDFVRQTSDFTRSVQNGHPIRGLSNEMVDVIERVFPTSAADTNRPMENTTPTRPQNNTPAPMNHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E697</accession>
    <name>E3E697_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YhhM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhhM</name>
        <name evidence="2" type="ORF">PPSC2_13200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371386.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2816"/>
    <dbReference type="EnsemblBacteria" id="ADO56782">
        <property type="protein sequence ID" value="ADO56782"/>
        <property type="gene ID" value="PPSC2_13200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2810"/>
    <dbReference type="eggNOG" id="ENOG5032T7R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_138370_0_0_9"/>
    <dbReference type="OMA" id="GEEYGQC"/>
    <dbReference type="OrthoDB" id="1917919at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019635">
        <property type="entry name" value="DUF2500"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10694">
        <property type="entry name" value="DUF2500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="131" mass="15382" checksum="F65B6A7109E48D0B" modified="2011-01-11" version="1">MGFESLWMFDWLGTVLPVFFVVVLGIVVLSAGREVMEWSRNKRQPVLTVGSRITARRTHLQQRRQEEQGTRTYTFYYVTFEVESGDRMEFKVSGEEYGQCAEGDEGRLTFQGTRYIGFQRLNRYSLEQVKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6B1</accession>
    <name>E3E6B1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yhjX</name>
        <name evidence="10" type="ORF">PPSC2_18780</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372557.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05995"/>
    <dbReference type="EnsemblBacteria" id="ADO57980">
        <property type="protein sequence ID" value="ADO57980"/>
        <property type="gene ID" value="PPSC2_18780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4024"/>
    <dbReference type="eggNOG" id="COG2223">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001265_59_7_9"/>
    <dbReference type="OMA" id="IGMASPM"/>
    <dbReference type="OrthoDB" id="1594866at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="132"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="165"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="215"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="248"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="281"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="305"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="341"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="368"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="7"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="394"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="44242" checksum="837D0C7024D1ADC0" modified="2011-01-11" version="1">MKSNSGNRLLVVLGTIIVQMGLGTIYTWSLFNQPLVDRFGWNLSSVAITFSITSFALAFATLFAGKLQDKWGLRRLILCAGVVLGAGLMLSSQVTSLSLLYILAGIIVGFADGTAYITSLSNLIKWFPEKKGLISGISVGAYGTGSLIFKYINGSLIQSVGVSQAFLYWGMIVLIMIVGGSFLVKEAVVMNKPSVQNGAVQRDYTVKEMLRTKQAYLLFVMFFTACMSGLYLIGVVKDIGVRMADLDVATAANAVAMVAIFNTAGRIILGALSDKVGRLKVVAGALLTTAIAVTVLSVIPLNFGLFFACVAGIAFCFGGNITVFPAIVADFFGLKNQSKNYGIVYQGFGLGALAGSFIAALLGGFIPTFTTIAVLCVVSFLIALTIRTPEQGKGKLRSERKKNANGVRSMKPGTKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6B3</accession>
    <name>E3E6B3_PAEPS</name>
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        <submittedName>
            <fullName evidence="6">LytTR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ypdB</name>
        <name evidence="6" type="ORF">PPSC2_18785</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06000"/>
    <dbReference type="EnsemblBacteria" id="ADO57982">
        <property type="protein sequence ID" value="ADO57982"/>
        <property type="gene ID" value="PPSC2_18785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4026"/>
    <dbReference type="eggNOG" id="COG3279">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_14_1_9"/>
    <dbReference type="OMA" id="IQAFEEH"/>
    <dbReference type="OrthoDB" id="1958442at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007492">
        <property type="entry name" value="LytTR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04397">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00850">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50930">
        <property type="entry name" value="HTH_LYTTR"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="HTH LytTR-type" evidence="5">
        <location>
            <begin position="149"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="3">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="29569" checksum="D4FB96D1DDD4B87D" modified="2011-01-11" version="1">MKAIIVEDELPAREELEYLIQTHSSIEVTDSFEDGLDVFRFLQDQETDAIFLDINIPSLDGMLLAQNISKFAKKPYIIFTTAYKEHAAQAFELEAFDYILKPYDEKRIASMLHKLENAYEQRNAQIQEPVQAGQPRAAETSTVAAPGRINLLKNDKIIVTDANDIYYACAQEKVTRVFTRHEEYTMPMSISEFHARLPQQDFFRCHRSYTVNLSQIREIVPWFNHTYLLRLRGLEAEIPVSRSKAKEFRQIMRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6H6</accession>
    <name>E3E6H6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Putative fluoride ion transporter CrcB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">crcB</name>
        <name evidence="10" type="ORF">PPSC2_19080</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Important for reducing fluoride concentration in the cell, thus reducing its toxicity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the CrcB (TC 9.B.71) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372620.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06280"/>
    <dbReference type="EnsemblBacteria" id="ADO58045">
        <property type="protein sequence ID" value="ADO58045"/>
        <property type="gene ID" value="PPSC2_19080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4088"/>
    <dbReference type="eggNOG" id="COG0239">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_114342_2_3_9"/>
    <dbReference type="OMA" id="EVMDKDH"/>
    <dbReference type="OrthoDB" id="1942863at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1903425">
        <property type="term" value="F:fluoride transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00454">
        <property type="entry name" value="CrcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003691">
        <property type="entry name" value="CrcB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28259">
        <property type="entry name" value="PTHR28259"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02537">
        <property type="entry name" value="CRCB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00494">
        <property type="entry name" value="crcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="30"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="97"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="13426" checksum="32F568261C109B65" modified="2011-01-11" version="1">MIWWAAAGGMVGTIARYGLGMWAGKRLGTVFPWGTWIINISGSLLLGWLYGEFTQHNLSPVLWMLLGTGFCGGYTTFSTFGYESIQLMEHKKYRRMAVYVLSSVIVGVIAAAIGYRVSYIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6N4</accession>
    <name>E3E6N4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Serine/threonine protein phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">prpA3</name>
        <name evidence="3" type="ORF">PPSC2_20300</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallophosphoesterase superfamily. YfcE family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372866.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07555"/>
    <dbReference type="EnsemblBacteria" id="ADO58294">
        <property type="protein sequence ID" value="ADO58294"/>
        <property type="gene ID" value="PPSC2_20300"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20300"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4328"/>
    <dbReference type="eggNOG" id="COG0639">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074761_0_1_9"/>
    <dbReference type="OMA" id="YLCHATP"/>
    <dbReference type="OrthoDB" id="1355703at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024654">
        <property type="entry name" value="Calcineurin-like_PHP_lpxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011152">
        <property type="entry name" value="Pesterase_MJ0912"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12850">
        <property type="entry name" value="Metallophos_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000883">
        <property type="entry name" value="Pesterase_MJ0912"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos_2" evidence="2">
        <location>
            <begin position="3"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="27785" checksum="A7F110845A9BEF80" modified="2011-01-11" version="1">MDRIAVISDIHGNWPACEAVLEDIASRGISRVFCLGDLIGKGPSPCEVLDAIRQHCEVVVRGNWDELVSITDDLNFSWQAERLGADRVQYLAQLPFHYDFRMSGRRIRLVHASPQSVYHRVQPWDEPAKRLAMFDPLAEESGKVPFAPEVVGYGDVHNAFIQHFQGKTLFNVGSVGNPLDITQASYCILEGRWGEEQLTPFSIHFARVPYDIELAVKQAEEADVPSLAYYIRELRTGIYRGIQDLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E715</accession>
    <name>E3E715_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">50S ribosomal protein L2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">rplB</name>
        <name evidence="8" type="ORF">PPSC2_22420</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.</text>
    </comment>
    <comment type="function">
        <text evidence="5">One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373265.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09885"/>
    <dbReference type="EnsemblBacteria" id="ADO58717">
        <property type="protein sequence ID" value="ADO58717"/>
        <property type="gene ID" value="PPSC2_22420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4753"/>
    <dbReference type="eggNOG" id="COG0090">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036235_2_1_9"/>
    <dbReference type="OMA" id="SCIELRP"/>
    <dbReference type="OrthoDB" id="961486at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01320_B">
        <property type="entry name" value="Ribosomal_L2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022666">
        <property type="entry name" value="Rbsml_prot_L2_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002171">
        <property type="entry name" value="Ribosomal_L2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005880">
        <property type="entry name" value="Ribosomal_L2_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022669">
        <property type="entry name" value="Ribosomal_L2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022671">
        <property type="entry name" value="Ribosomal_L2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014726">
        <property type="entry name" value="Ribosomal_L2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691">
        <property type="entry name" value="PTHR13691"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00181">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03947">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002158">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01383">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01382">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01171">
        <property type="entry name" value="rplB_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00467">
        <property type="entry name" value="RIBOSOMAL_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L2_C" evidence="7">
        <location>
            <begin position="124"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="223"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="276" mass="30405" checksum="00EC7976F9CCB09F" modified="2011-01-11" version="1">MPIKKYKPTSPARRAMSVSTFEEITTNQPEKSLLAPLSKQAGRNNQGKITVRHHGGGHKRKYRIIDFKRNKDGIPGRVATIEYDPNRTSNIALIHYVDGEKRYIIAPKGLKVGDIVVSGPDSDIKIGNSLPLENIPVGTVIHNIELKPGKGGQLVRAAGTEAQLLGKEEKYVTIRLTSGEVRRILKVCRATIGSVGNEDHELVKIGKAGRSRWLGQRPEVRGVVMNPNDHPHGGGEGRAPIGRKSPMSPWGKPTLGYKTRKKGKASDKYIVRRRTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E730</accession>
    <name>E3E730_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L7/L12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rplL</name>
        <name evidence="7" type="ORF">PPSC2_22485</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial ribosomal protein bL12 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373275.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09950"/>
    <dbReference type="EnsemblBacteria" id="ADO58732">
        <property type="protein sequence ID" value="ADO58732"/>
        <property type="gene ID" value="PPSC2_22485"/>
    </dbReference>
    <dbReference type="GeneID" id="66575570"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4766"/>
    <dbReference type="eggNOG" id="COG0222">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086499_3_2_9"/>
    <dbReference type="OMA" id="LEDKWGV"/>
    <dbReference type="OrthoDB" id="1822695at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00387">
        <property type="entry name" value="Ribosomal_L7_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00368">
        <property type="entry name" value="Ribosomal_L7_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000206">
        <property type="entry name" value="Ribosomal_L7/12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014719">
        <property type="entry name" value="Ribosomal_L7/12_C/ClpS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013823">
        <property type="entry name" value="Ribosomal_L7/L12_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008932">
        <property type="entry name" value="Ribosomal_L7/L12_oligo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036235">
        <property type="entry name" value="Ribosomal_L7/L12_oligo_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45987">
        <property type="entry name" value="PTHR45987"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00542">
        <property type="entry name" value="Ribosomal_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16320">
        <property type="entry name" value="Ribosomal_L12_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48300">
        <property type="entry name" value="SSF48300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54736">
        <property type="entry name" value="SSF54736"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00855">
        <property type="entry name" value="L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_L12_N" evidence="6">
        <location>
            <begin position="3"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L12" evidence="5">
        <location>
            <begin position="55"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="121" mass="12473" checksum="CB4AD2E1AC4E0D66" modified="2011-01-11" version="1">MSKEQILEAIKGMSVLELNDLVKAIEEEFGVTAAAPVAVAGGAAGGAAEAEQSEFDVILTSAGASKINVIKAVREITGLGLKEAKELVDNAPKPLKEKVAKEEAESVKAKLEEAGASVEVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E754</accession>
    <name>E3E754_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Serine hydroxymethyltransferase</fullName>
            <shortName evidence="7">SHMT</shortName>
            <shortName evidence="7">Serine methylase</shortName>
            <ecNumber evidence="7">2.1.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">glyA</name>
        <name evidence="10" type="ORF">PPSC2_23315</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + glycine + H2O = (6S)-5,6,7,8-tetrahydrofolate + L-serine</text>
            <dbReference type="Rhea" id="RHEA:15481"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="EC" id="2.1.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 7 8">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; glycine biosynthesis; glycine from L-serine: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the SHMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.1" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58909.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324828.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10805"/>
    <dbReference type="EnsemblBacteria" id="ADO58909">
        <property type="protein sequence ID" value="ADO58909"/>
        <property type="gene ID" value="PPSC2_23315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4936"/>
    <dbReference type="eggNOG" id="COG0112">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_022477_2_1_9"/>
    <dbReference type="OrthoDB" id="861782at2"/>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="UniPathway" id="UPA00288">
        <property type="reaction ID" value="UER01023"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004372">
        <property type="term" value="F:glycine hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019264">
        <property type="term" value="P:glycine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00378">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00051">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001085">
        <property type="entry name" value="Ser_HO-MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019798">
        <property type="entry name" value="Ser_HO-MeTrfase_PLP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="PTHR11680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000412">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00096">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4 7" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6 7 8" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SHMT" evidence="9">
        <location>
            <begin position="5"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="122"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="350"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="233"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="358"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="7 8">
        <location>
            <position position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000412-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58909.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="416" mass="44739" checksum="FF8B1816F1179EF4" modified="2015-05-27" version="2">MMEHLRKSDPAVMEAMGLELKRQRHNIELIASENIVSEAVMEAMGSVLTNKYAEGYPNKRYYGGCEHVDIVEDIARDRAKELFGAEHANVQPHSGAQANMAVYLAALQPGDTVLGMNLAHGGHLTHGSPVNASGLLYNFAAYGVREDNFRIDYDEVRKAAFKHRPRLIVAGASAYPRTIDFEAFASIANDVGALFMVDMAHIAGLVAAGIHPSPVPHAQFVTTTTHKTLRGPRGGLILTRKAWAQAIDKAIFPGTQGGPLMHVIASKAVALGEALQPSFKTYAQNVVRNAQVLAETLLAEGINIVSGGTDNHLMLLDTRNLNITGKEAEHVLDSVGITVNKNAIPFDPTSPFVTSGIRIGTPAATSRGMDEEAMVKIGKIIADTLKNPKDDTVLSKASQAVGELTDKFPIYPGTQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E757</accession>
    <name>E3E757_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protein tyrosine phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ywlE</name>
        <name evidence="5" type="ORF">PPSC2_23325</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the low molecular weight phosphotyrosine protein phosphatase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373448.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10815"/>
    <dbReference type="EnsemblBacteria" id="ADO58912">
        <property type="protein sequence ID" value="ADO58912"/>
        <property type="gene ID" value="PPSC2_23325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4939"/>
    <dbReference type="eggNOG" id="COG0394">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_071415_1_2_9"/>
    <dbReference type="OMA" id="AFFPQKA"/>
    <dbReference type="OrthoDB" id="2062716at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006470">
        <property type="term" value="P:protein dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017867">
        <property type="entry name" value="Tyr_phospatase_low_mol_wt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00719">
        <property type="entry name" value="LMWPTPASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00226">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="4">
        <location>
            <begin position="2"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="194" mass="21481" checksum="9705A4BBFF025C39" modified="2011-01-11" version="1">MKNILFVCTGNTCRSPMAEGMLRKLAAEHGLELDVRSAGVAAMDGTPISRHAEAVLRDHDISDQITSTPLSDGLAEWAHLILTLTQGHKQHVVQRFPQTAGKVFTLKEYVEDRDAVLNDVQELDGLYASQQLMASLGQELSTQERERMIELHQRIPGFDISDPFGGSREDYDVTAAEIRTALHKLLDKLKGSSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E785</accession>
    <name>E3E785_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhhY</name>
        <name evidence="2" type="ORF">PPSC2_23465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373476.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10955"/>
    <dbReference type="EnsemblBacteria" id="ADO58940">
        <property type="protein sequence ID" value="ADO58940"/>
        <property type="gene ID" value="PPSC2_23465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4967"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_19_2_9"/>
    <dbReference type="OMA" id="HVRQIQG"/>
    <dbReference type="OrthoDB" id="1809950at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="7"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="164" mass="18442" checksum="FA792854AF81E550" modified="2011-01-11" version="1">MFTSQSLTIRHSEMKDAPDLIALDELVWNERTAPASLSWKSRGEFLRNTPPGSQLVAIEQEVLCGYIGFRPPTLLASNCHVLEINIAVRPDYHRKGIGTALMNSMKEIAAAEGIRKLSLRVLSCNTEALMFYEKCGFAIEGRLHDEFYIAGQFVDDVLMAYFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7B0</accession>
    <name>E3E7B0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">VclE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">vclE</name>
        <name evidence="2" type="ORF">PPSC2_23580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373501.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5026"/>
    <dbReference type="EnsemblBacteria" id="ADO58965">
        <property type="protein sequence ID" value="ADO58965"/>
        <property type="gene ID" value="PPSC2_23580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4992"/>
    <dbReference type="eggNOG" id="COG4282">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_635918_0_0_9"/>
    <dbReference type="OMA" id="GWNHEYI"/>
    <dbReference type="OrthoDB" id="468600at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018958">
        <property type="entry name" value="Knr4/Smi1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09346">
        <property type="entry name" value="SMI1_KNR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00860">
        <property type="entry name" value="SMI1_KNR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMI1_KNR4" evidence="1">
        <location>
            <begin position="34"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="472" mass="53815" checksum="654D5A46ADF72C5A" modified="2011-01-11" version="1">MTVHFAHILEKLGGIAKRLRQGGMPDVVYQWTKGISEEELTELEERLQIPLPASLSELIKRCGSLHLLWCLPQHCIVADEPACSYESSNGLKQKPNMLDDITGEFGWNHEYISYFTSYGENTDSAADEQRYLILNYNGAGDPILLDRATSATEPAVFCYEHELDRFMLLAESLPTYIETMLALHGLWLWDWSNVSDELGIQLDSPPLQLWQRWLNTFCTMKLEDAARSLETLIHYTTMHGADHPAVLQAFQAYDPKDIFLAWEQRIQRNPAQFATWAFFIGETAGIGAADWVRSLWEPDTDITQAWNSSASNNIHAERAFVSTRAYLSARCLPEQEGLENVYNDLMQHTAKDGKLEGYTVSGQLQHFHSPQVIDWMRDKVNHPVDGWAVLFAYSRPTAEQVIEWLSSNELHQKIATEALDIMIQRDLLPGLEADVWASISNLLHASLQLVMLKKDKRRIEAVLEQLSDLKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7G0</accession>
    <name>E3E7G0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Major facilitator transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yihO3</name>
        <name evidence="3" type="ORF">PPSC2_24530</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373704.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12010"/>
    <dbReference type="EnsemblBacteria" id="ADO59171">
        <property type="protein sequence ID" value="ADO59171"/>
        <property type="gene ID" value="PPSC2_24530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5196"/>
    <dbReference type="eggNOG" id="COG2211">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027408_4_1_9"/>
    <dbReference type="OMA" id="DIVYTMI"/>
    <dbReference type="OrthoDB" id="1249292at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="PTHR11328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="85"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="108"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="178"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="245"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="308"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="335"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="420"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO59171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="510" mass="57234" checksum="96EAFEA88C2D6E1E" modified="2011-01-11" version="1">MERKITLKHTLAYGSGNMLGSGALAISGAWLMYFYTTFCGLSPVQAAAIFSVASIIDAVSNPIMGFISDNFHRTRLGRKFGRRRFFIMMGIPLMLVYPMLWIDGLGFWYYLSTYVLFELVYTSVMVPYEALASEMTRDFGARSRLTGWKAMFGKIANFAAAFIPGRFIAAYGKDSPLPFLYTGLVFAAILLIAMAFLYKNSWERPSEELQKELEGEAPLSFIDSMKKLFIDISSTFRVKTFRHHLGMYLGGFSAEWLFTSAFTYFIVFSLFQSSEMVSNLNSFNSVIQLISTYFFIQFCVRKGFRMPFIAALVVVCFSVAGYGLLYMTGASNTMMWLYVITLFMGLGTGGVYYIPWNQYTFLADVDEALTGRRREGIYAGMMTFAGKMVRAVVVFILGWVLQNFGFVSGAESQPVSAQHAIFYVLVVGTIVLAIIGMIASVVMKLDIDSHKKLIAEIDRLKNGGSMKSAKPEARKVFEQLTGFSYERCWGNNNVGFKSRPVDPKTHTPSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7L1</accession>
    <name>E3E7L1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">xerC5</name>
        <name evidence="6" type="ORF">PPSC2_13360</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371419.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01050"/>
    <dbReference type="EnsemblBacteria" id="ADO56815">
        <property type="protein sequence ID" value="ADO56815"/>
        <property type="gene ID" value="PPSC2_13360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2846"/>
    <dbReference type="eggNOG" id="COG4974">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027562_9_6_9"/>
    <dbReference type="OMA" id="EKNGAHM"/>
    <dbReference type="OrthoDB" id="745068at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02899">
        <property type="entry name" value="Phage_int_SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="5">
        <location>
            <begin position="17"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="4">
        <location>
            <begin position="150"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO56815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="366" mass="42737" checksum="3F87BB66F2E3841E" modified="2011-01-11" version="1">MNIQKIIDRRKLDEKLPDLPWYVQQFMDYKLPDLSPSTLLEYVRDYEAFFSWLRSEGLSAGETNAQVTLEELETLHMDSITGFRLFLSTKREGSNSRITISRKLSSLRSLFHYLSQIAEDENFYPLLKRNIMAKVEIKRVHKPKDTAAKLKGKILEEEELLEFIGYIYEGYGQDLADNKQALYSYELNKERDACIASLILNSGLRVSEIVNLNMDDLDINNKLLYVYRKGNNDETFKTPVYFREQSKDDLALYLSLRHTRYRAPKKEKALFVARPNGSTEGKRMTKRAIQAMIIKYAKRFGKPYLTVHKLRHSFATDYYLQNDIYKTKEQLGHASTETTEVYAHLTDKTMSQAIERRIETQTDPAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="82" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7U6</accession>
    <name>E3E7U6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA topoisomerase (ATP-hydrolyzing)</fullName>
            <ecNumber evidence="3">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">gyrA3</name>
        <name evidence="11" type="ORF">PPSC2_14125</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the type II topoisomerase GyrA/ParC subunit family.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371579.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01780"/>
    <dbReference type="EnsemblBacteria" id="ADO56979">
        <property type="protein sequence ID" value="ADO56979"/>
        <property type="gene ID" value="PPSC2_14125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3015"/>
    <dbReference type="eggNOG" id="COG0188">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002977_7_0_9"/>
    <dbReference type="OMA" id="PRSNRID"/>
    <dbReference type="OrthoDB" id="217468at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00187">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.268.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.199.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013758">
        <property type="entry name" value="Topo_IIA_A/C_ab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013757">
        <property type="entry name" value="Topo_IIA_A_a_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002205">
        <property type="entry name" value="Topo_IIA_dom_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005741">
        <property type="entry name" value="TopoIV_A_Gpos"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43493:SF9">
        <property type="entry name" value="PTHR43493:SF9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00521">
        <property type="entry name" value="DNA_topoisoIV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00434">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01061">
        <property type="entry name" value="parC_Gpos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="TOP4c" evidence="10">
        <location>
            <begin position="10"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="428"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="820" mass="91939" checksum="F7FBA6ADC24ED8B4" modified="2011-01-11" version="1">MSLSEQFLPAYLEEMVGDRFGRYSKYIIQDRAIPDVRDGLKPVQRRILYAMYDSGNTPEKAYRKSAKTVGDVMGNYHPHGDSSIYDGMVRMAQPWKMSHVLVDGHGNWGSQDDDPAAAMRYTEARLSPIAMEMLRDIEKRTVLFKDNFDNSAKEPVVLPSRYPNLLVNGSSGISAGFATEIPTHSLREVIDATIAVMEKPQIELEEIMTFIKGPDFPTGGLIMGGEGIKDAYRTGKGRIYIRSKTEIQSLRGGKQQLVITEIPYQVVKSRLVTAMENIRLEKKVEGIAEVRDESGRNGLRIVVELKKEADAEGILAYLLKKTDLQVAYNFNMVAIVNKAPHQLGLKSILEAYIAHQREVVTNRIKFELEKAEDRAHVLEGLVKALNILDEVIAAIKASKNRQDAQNNLQWMFGFSERQADSILTLQLYRLTNLEITTLEKELADIQKKITQYRSILDSDRKLISLIRKELLEIREKYGIDRRSEIQGEVEEIKVNLEVMVAAEDVLLTLSKDGYVKRTSMLSFTRSGGERSNSGVKEGDYITQFLDVNTLDVLLVFTQRGQYFLLPVHQVPEYKWKEPGTPIVNVISLAKEDRIVSVIPIKNMEEIGKSLVFVTKKGQVKRTELTEYATKRSSAVAACKVAGDDEILSVTLSDNSKDIMLITRAGMSIRFKEQEVNAMGRVSAGVKGIQLAEGDEIVAALWVEEDEGEVLVLTESGYGKRTLLLDYPSQGRGGKGISTFEFKEGKRVRSNGTRIVAAFYCREAVQLFVITSEGQTMSFLSEKAPLTDRKDTGKLLAPVEKKDEIVNVLPRSEPQSSQTVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7V1</accession>
    <name>E3E7V1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371584.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3023"/>
    <dbReference type="EnsemblBacteria" id="ADO56984">
        <property type="protein sequence ID" value="ADO56984"/>
        <property type="gene ID" value="PPSC2_14150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3020"/>
    <dbReference type="eggNOG" id="COG2013">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040551_4_1_9"/>
    <dbReference type="OMA" id="AMVYMKG"/>
    <dbReference type="OrthoDB" id="1063432at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002838">
        <property type="entry name" value="AIM24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036983">
        <property type="entry name" value="AIM24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016031">
        <property type="entry name" value="Trp_RNA-bd_attenuator-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01987">
        <property type="entry name" value="AIM24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51219">
        <property type="entry name" value="SSF51219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00266">
        <property type="entry name" value="TIGR00266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="226" mass="24569" checksum="9D19E5136CA6D1F4" modified="2011-01-11" version="1">MSYEIVHEGAFAMLKVQLSPGETIKAEMGAMVSMSSSVDIKGTVDGGLLRGLGRMLSGEKFFFQELRAARGPAEVLLAPASIGDVQAVELDGTYRLLVQKDGFLACTEGIEVSTKMQNLMKGLFSGEGFFIVEISGRGTVFLSSYGAIHPIYIAPGEERIIDNAHLVAWPDYMDYRIEKASKGWLSSVTSGEALVCRFRGEGTVLIQSRNPGSFGQWIRSFIPDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Z1</accession>
    <name>E3E7Z1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyl-phosphate glycerol 3-phosphate acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">plsC</name>
        <name evidence="2" type="ORF">PPSC2_14720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371700.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02355"/>
    <dbReference type="EnsemblBacteria" id="ADO57104">
        <property type="protein sequence ID" value="ADO57104"/>
        <property type="gene ID" value="PPSC2_14720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3141"/>
    <dbReference type="eggNOG" id="COG0204">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027938_4_5_9"/>
    <dbReference type="OMA" id="RPWVEGL"/>
    <dbReference type="OrthoDB" id="1756450at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PlsC" evidence="1">
        <location>
            <begin position="34"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="197" mass="21166" checksum="AA0C72CC48E9C394" modified="2011-01-11" version="1">MIYTVCASILRLIYRFLFRLEAVGRENVPAEGGVLLCSNHISNLDPPTVGILLKRKVHFMAKAELFNVPVLGPLIDKLGAFPVKRGGVSKESIKLALNILRDGKVMGIFPEGSRGAGGIGKKGAASFALRSGAAAVPVAIIGDYKLFRKTKVIYGKPVNLDAYQKGADVEGDPLELATEAIMSRIRTMKETGEPTND</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Z6</accession>
    <name>E3E7Z6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">Protease PrsW</fullName>
            <ecNumber evidence="11">3.4.-.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">Protease responsible for activating sigma-W</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ypdC</name>
        <name evidence="13" type="ORF">PPSC2_14740</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Involved in the degradation of specific anti-sigma factors.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the protease PrsW family.</text>
    </comment>
    <dbReference type="EC" id="3.4.-.-" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371705.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02375"/>
    <dbReference type="MEROPS" id="M82.001"/>
    <dbReference type="EnsemblBacteria" id="ADO57109">
        <property type="protein sequence ID" value="ADO57109"/>
        <property type="gene ID" value="PPSC2_14740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3146"/>
    <dbReference type="eggNOG" id="COG2339">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_081250_0_0_9"/>
    <dbReference type="OMA" id="DEPYDGI"/>
    <dbReference type="OrthoDB" id="1626415at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023596">
        <property type="entry name" value="Peptidase_PrsW_arch/bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026898">
        <property type="entry name" value="PrsW"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36844">
        <property type="entry name" value="PTHR36844"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13367">
        <property type="entry name" value="PrsW-protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016933">
        <property type="entry name" value="PrsW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9 11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="35"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="134"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="192"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00030345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR016933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="26674" checksum="CCC52A3F5054591B" modified="2011-01-11" version="1">MLLFSVLAAATAPGLALLMYFYLKDRYDSEPLHMVIKVFLLGFLVVLPVMIFQRGLLIWLGDDTLIQVFGISAGVEEFFKWFLLYHIIYNHTEFDEPYDGILYAAAVSLGFATVENLLYAWAGHASISMMLMRSLLPVSGHAMFGVMMGYYMGKAKFSVDLKSKYMLLLSLVLPWFWHGVYDLILTKFSHDWIWFIIPLMAFLWYGGMAKISRANNRSPFRMLKREEKVNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E839</accession>
    <name>E3E839_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ADP-ribose pyrophosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">nudF</name>
        <name evidence="4" type="ORF">PPSC2_14945</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371745.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02580"/>
    <dbReference type="EnsemblBacteria" id="ADO57152">
        <property type="protein sequence ID" value="ADO57152"/>
        <property type="gene ID" value="PPSC2_14945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3188"/>
    <dbReference type="eggNOG" id="COG0494">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062658_5_1_9"/>
    <dbReference type="OMA" id="DYQVHPG"/>
    <dbReference type="OrthoDB" id="1831818at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="3">
        <location>
            <begin position="62"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="22757" checksum="06518BA23D21299D" modified="2011-01-11" version="1">MNDQTNEQVNNPTNNTLRKPYSNPALEEKTVSTQPIFEGKVITVQVDTVELPDGSTGKREIVKHPGAVAVLALHEGKMLVVDQYRQAMGRCEVEIPAGKLERGEDPLEAAGRELREETGYTAKSLKLLHSFYTSPGFADEIIHLYVAEDLERGEMEPDEDEFLELFEVALEEAHTLIREGRISDAKTILAVYAWQLRQQTGSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8B8</accession>
    <name>E3E8B8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_15695</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0473 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007431055.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03345"/>
    <dbReference type="EnsemblBacteria" id="ADO57310">
        <property type="protein sequence ID" value="ADO57310"/>
        <property type="gene ID" value="PPSC2_15695"/>
    </dbReference>
    <dbReference type="GeneID" id="66576842"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3351"/>
    <dbReference type="eggNOG" id="COG3906">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_146610_6_0_9"/>
    <dbReference type="OMA" id="VNYNGND"/>
    <dbReference type="OrthoDB" id="2057244at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009711">
        <property type="entry name" value="UPF0473"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06949">
        <property type="entry name" value="DUF1292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="101" mass="11883" checksum="EA76A16463265E52" modified="2011-01-11" version="1">MSDHKHEHGEACNHDHDHEHEEMVLTLTDENGKDVEMVLVETFDVEDHVYALLLERGNPEADGIILRMEEENEEMVLYNIEDEDEWKRVEAAYSELVAQYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8C2</accession>
    <name>E3E8C2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sav1054</name>
        <name evidence="2" type="ORF">PPSC2_15715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57314.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025675812.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03365"/>
    <dbReference type="EnsemblBacteria" id="ADO57314">
        <property type="protein sequence ID" value="ADO57314"/>
        <property type="gene ID" value="PPSC2_15715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3355"/>
    <dbReference type="eggNOG" id="COG2153">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056607_6_2_9"/>
    <dbReference type="OMA" id="PHVEMRK"/>
    <dbReference type="OrthoDB" id="1777515at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004343">
        <property type="term" value="F:glucosamine 6-phosphate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006048">
        <property type="term" value="P:UDP-N-acetylglucosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039143">
        <property type="entry name" value="GNPNAT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13355">
        <property type="entry name" value="PTHR13355"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57314.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="147" mass="16902" checksum="4C0D4A462D529445" modified="2015-05-27" version="2">MAAEIITVTTEEQLQKAILIRTKVFVEEQKVPLDLEIDHYDKLGDTAHHLLICEHGEMVATGRLTYYDEDTAKMQRIAVLKEHRAAGYGRVLLLALEERARELGLRYSLLDAQCQAEKFYEKLGYETISDEPFDDAGIPHVRMRKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8F1</accession>
    <name>E3E8F1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Cell division protein FtsA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">ftsA</name>
        <name evidence="9" type="ORF">PPSC2_16585</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Self-interacts. Interacts with FtsZ.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Peripheral membrane protein</topology>
            <orientation evidence="5">Cytoplasmic side</orientation>
        </subcellularLocation>
        <text evidence="5">Localizes to the Z ring in an FtsZ-dependent manner. Targeted to the membrane through a conserved C-terminal amphipathic helix.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the FtsA/MreB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372085.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03920"/>
    <dbReference type="EnsemblBacteria" id="ADO57500">
        <property type="protein sequence ID" value="ADO57500"/>
        <property type="gene ID" value="PPSC2_16585"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16585"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3540"/>
    <dbReference type="eggNOG" id="COG0849">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037850_1_1_9"/>
    <dbReference type="OMA" id="DGIIRHT"/>
    <dbReference type="OrthoDB" id="1044637at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032153">
        <property type="term" value="C:cell division site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009898">
        <property type="term" value="C:cytoplasmic side of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043093">
        <property type="term" value="P:FtsZ-dependent cytokinesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02033">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020823">
        <property type="entry name" value="Cell_div_FtsA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003494">
        <property type="entry name" value="SHS2_FtsA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02491">
        <property type="entry name" value="SHS2_FTSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003101">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00842">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01174">
        <property type="entry name" value="ftsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 5 6" id="KW-0132">Cell division</keyword>
    <keyword evidence="1 5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FtsA" evidence="8">
        <location>
            <begin position="7"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="379"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="379"/>
            <end position="405"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR003101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="423" mass="45260" checksum="528DD43ED305FA3B" modified="2011-01-11" version="1">MSNNDIIVSLDIGTSKVRAIIGEMNNGTFNIIGVGSADSEGIRKGAIVDIDQTVQSIRNAVDHAERMVGIQITEVYVGISGNHIGLQNSHGVVAVSNEDREIGEEDIERVLKAAEVIAVPPEREIIDVVAKQYVVDGLEGIQDPRGMIGVRLEVEATIVTGGKTPIHNLLRCVEKAGLRIKDLVLLPLGAGQLSLSKDEKVMGSVLVDIGAGSTNVAIFQEGTIVATSTLPIGGEFVTNDIAYGLRTLTDQAEKVKLKYGCAWYDDAAADVVFKVTRIGSNVDKEFTQQDLAAIIEPRVQEIFQLIQAEVKRLGYTELPGGYILTGGTVSMPGVLQVAQSELAASVRIAVPDFIGVRDPGYTSGVGILHNAIRYYRGRSTSVSNSGGSTKKPTSRTKSSSPVAEGEQKQGLIERLKNMFSEFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8J0</accession>
    <name>E3E8J0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Serine protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">apr</name>
        <name evidence="7" type="ORF">PPSC2_16770</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372123.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04105"/>
    <dbReference type="EnsemblBacteria" id="ADO57539">
        <property type="protein sequence ID" value="ADO57539"/>
        <property type="gene ID" value="PPSC2_16770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3579"/>
    <dbReference type="eggNOG" id="COG1404">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028018_0_0_9"/>
    <dbReference type="OMA" id="NTERPGY"/>
    <dbReference type="OrthoDB" id="923655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07484">
        <property type="entry name" value="Peptidases_S8_Thermitase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023827">
        <property type="entry name" value="Peptidase_S8_Asp-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034084">
        <property type="entry name" value="Thermitase-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="SSF52743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00136">
        <property type="entry name" value="SUBTILASE_ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 7" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Peptidase_S8" evidence="6">
        <location>
            <begin position="344"/>
            <end position="588"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="626" mass="69644" checksum="7C653AD1CB670801" modified="2011-01-11" version="1">MSRPKWLKPLLGAAAGVLLITLMLPSRDHRQTPQPQYTTKMVPQQEKQLKKGMLALDLSATDTLTRMDARQDIQYVMRELNGKTANQKRQFTHTLQQSHSHLHTLQWIHIRDGKTDTYTGNKAQTSLLNHPQIQSSLAAARRSVMQNKSYESAAFQVEGGKYFVMAEPSADGTCGVAALVSQQVLRDVEKHQRKNLRLIPYPKEGSYKIESVHPDTLHDITVKTGHDNENASHYFENEIVVRFRQNPDSRQLKEIAADLHCEPGRKLGYTYVFHSDKMNFKELKQYFSQKWNPLYAEPHYMYLTNEKAPINADSSIPNDLLFSRYQWNLPATETNRGWKLSKGSKDVIVAVVDTGVDLDHPDLKGQILSGHNVVNPSEKPYDDVGHGTHVAGIISALVNNGEGVAGMTWYNKVMPIKVLDQSGSGTTYSVAEGIIWAADHGAKVINLSLGNYAQASFLHDAIKYAYDKDVVLVAATGNDNTERPGYPAAYPEVFAVSATDSSMHRASFSNYGDYVDVMAPGASIASTYPGNQYAALSGTSMASPHVSALAALIRSVNPDLTNKEVMDLMRDSVIDLGTPGHDKYFGYGQIDVYKALKAAQRPYVPLQFYPQHFSDKLKSILKKLEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8M1</accession>
    <name>E3E8M1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HIT family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hit</name>
        <name evidence="3" type="ORF">PPSC2_16905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372152.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04240"/>
    <dbReference type="EnsemblBacteria" id="ADO57570">
        <property type="protein sequence ID" value="ADO57570"/>
        <property type="gene ID" value="PPSC2_16905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3609"/>
    <dbReference type="eggNOG" id="COG0537">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056776_8_1_9"/>
    <dbReference type="OMA" id="SDCLFCK"/>
    <dbReference type="OrthoDB" id="1778239at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001310">
        <property type="entry name" value="Histidine_triad_HIT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011146">
        <property type="entry name" value="HIT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23089">
        <property type="entry name" value="PTHR23089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01230">
        <property type="entry name" value="HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00332">
        <property type="entry name" value="HISTRIAD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="SSF54197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51084">
        <property type="entry name" value="HIT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HIT" evidence="2">
        <location>
            <begin position="4"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Histidine triad motif" evidence="1">
        <location>
            <begin position="97"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="119" mass="12726" checksum="C1D827F84ED9E519" modified="2011-01-11" version="1">MDDLFLKIVDGSIPSKKVLETDNVLAFHDIQPAAPVHVLIIPKKYIPSMNAVTEEDLPLIAEIHRVAVEVAKKLGIAESGYRLINNCGPDSGQAVGHLHYHLLGGAKLGALTGISDSHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Q4</accession>
    <name>E3E8Q4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SMI1_KNR4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372343.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3809"/>
    <dbReference type="EnsemblBacteria" id="ADO57763">
        <property type="protein sequence ID" value="ADO57763"/>
        <property type="gene ID" value="PPSC2_17810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3806"/>
    <dbReference type="eggNOG" id="ENOG5032R3M">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1466839_0_0_9"/>
    <dbReference type="OMA" id="MNLAYEL"/>
    <dbReference type="OrthoDB" id="1314990at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018958">
        <property type="entry name" value="Knr4/Smi1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09346">
        <property type="entry name" value="SMI1_KNR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMI1_KNR4" evidence="1">
        <location>
            <begin position="72"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="21079" checksum="A0F75A3774D2E5EF" modified="2011-01-11" version="1">MWSIHFEQQFVKCPEATGEQIAIFLSTWNIKLSEQEIREIQQRQVNPFPKSSPFYDQYKPLDPVSWHLPQGQFPDSYIELLKYSNGGEFQNGERYFQFFNTEDLREMNLAYELPEYMPGAVSFAMDGCGNHYMFDMREEKRNNEYPILFAHSGSLGYDECEQVAHSFMELCTEKWALY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8R3</accession>
    <name>E3E8R3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372352.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3818"/>
    <dbReference type="EnsemblBacteria" id="ADO57772">
        <property type="protein sequence ID" value="ADO57772"/>
        <property type="gene ID" value="PPSC2_17855"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17855"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3815"/>
    <dbReference type="eggNOG" id="ENOG503149I">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_770904_0_0_9"/>
    <dbReference type="OrthoDB" id="805734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="334" mass="39267" checksum="ED06C9FF2BAE44C9" modified="2011-01-11" version="1">METNYKKLLDQMMAPYDEMLQSLISDHADYSKVDYLEKYSEEYGKNDANYTNRLKVLLAMYNREDRYAPYYEPIVRRLLVNEIIDRETNSFQGIGDALYYAVFLLQKYEREQDQVLFQQAKKANFDTYAGFDPELILETYLFSKDTADLEDCINIASELGEDVYLSLFIDLWIREQTDWDKENLRTLVYHERWRNHAEGEIEALKKLAEMEKIEENSSNYCSTASSLAEKLIETGRWDEAWETMATIIPLITKEKEWFLYGLGRNIITACIHIIMHFGAKSRQATSLWQMIKGVLQPATNNMGTIQYQLAVSVSKFMGDTKLEQKLLRIRKQRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Y2</accession>
    <name>E3E8Y2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Branched-chain-amino-acid aminotransferase</fullName>
            <shortName evidence="15">BCAT</shortName>
            <ecNumber evidence="15">2.6.1.42</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15 16" type="primary">ilvE</name>
        <name evidence="16" type="ORF">PPSC2_19315</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 15">Acts on leucine, isoleucine and valine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>2-oxoglutarate + L-isoleucine = (S)-3-methyl-2-oxopentanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24801"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:35146"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 15">
            <text>2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:18321"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:17865"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57427"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 15">
            <text>2-oxoglutarate + L-valine = 3-methyl-2-oxobutanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24813"/>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4 14">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="6 15">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 4/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8 15">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 4/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7 15">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9 13">Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.42" evidence="15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372655.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06515"/>
    <dbReference type="EnsemblBacteria" id="ADO58080">
        <property type="protein sequence ID" value="ADO58080"/>
        <property type="gene ID" value="PPSC2_19315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4122"/>
    <dbReference type="eggNOG" id="COG0115">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_020844_3_0_9"/>
    <dbReference type="OMA" id="WRGSEMM"/>
    <dbReference type="OrthoDB" id="1275805at2"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00058"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00073"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00062"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052656">
        <property type="term" value="F:L-isoleucine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052654">
        <property type="term" value="F:L-leucine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050048">
        <property type="term" value="F:L-leucine:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052655">
        <property type="term" value="F:L-valine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018300">
        <property type="entry name" value="Aminotrans_IV_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005785">
        <property type="entry name" value="B_amino_transI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="SSF56752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01122">
        <property type="entry name" value="ilvE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00770">
        <property type="entry name" value="AA_TRANSFER_CLASS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 15" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="15 16" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="12 15" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="11 14" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="15 16" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00003109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00004824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00004931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00005072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00009320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU004516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU364094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ADO58080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="32581" checksum="1E56620BC080C1F5" modified="2011-01-11" version="1">MAEQWIYLDGQHVTKENAKVSVYDHGFLYGDGIFEGIRIYNGNIFKCKEHLERLYDSAKSIQLNIPLSPDEMLEAMAETIRLNEMRNGYIRLVVSRGAGNLGLDPLRCAKASVIIIVEQLAIYPEEAYLTGLKTISVSQRRNIPDALNPKIKSLNYLNNILVKIQSNYAGVGEAIMLNSQGYVTEGSADNIFIVKNGVLYTPPCYLGALEGITRNAIIDLCAKLGYSLKEQPFTLHDVYVADEVFFTGTAAEVIAAYEVDGRTIGSGVAGPVTLELLAEFRKIVDQDGYKVWQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Y4</accession>
    <name>E3E8Y4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Homoserine kinase</fullName>
            <shortName evidence="11">HK</shortName>
            <shortName evidence="11">HSK</shortName>
            <ecNumber evidence="4 11">2.7.1.39</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 14" type="primary">thrB</name>
        <name evidence="14" type="ORF">PPSC2_19325</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + L-homoserine = ADP + H(+) + O-phospho-L-homoserine</text>
            <dbReference type="Rhea" id="RHEA:13985"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57476"/>
            <dbReference type="ChEBI" id="CHEBI:57590"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.39"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 4/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the GHMP kinase family. Homoserine kinase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.39" evidence="4 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372657.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06525"/>
    <dbReference type="EnsemblBacteria" id="ADO58082">
        <property type="protein sequence ID" value="ADO58082"/>
        <property type="gene ID" value="PPSC2_19325"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19325"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4124"/>
    <dbReference type="eggNOG" id="COG0083">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041243_0_2_9"/>
    <dbReference type="OMA" id="CANRIPH"/>
    <dbReference type="OrthoDB" id="610857at2"/>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00064"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004413">
        <property type="term" value="F:homoserine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00384">
        <property type="entry name" value="Homoser_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013750">
        <property type="entry name" value="GHMP_kinase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006204">
        <property type="entry name" value="GHMP_kinase_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006203">
        <property type="entry name" value="GHMP_knse_ATP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000870">
        <property type="entry name" value="Homoserine_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08544">
        <property type="entry name" value="GHMP_kinases_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00288">
        <property type="entry name" value="GHMP_kinases_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000676">
        <property type="entry name" value="Homoser_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00191">
        <property type="entry name" value="thrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00627">
        <property type="entry name" value="GHMP_KINASES_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11 14" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0791">Threonine biosynthesis</keyword>
    <keyword evidence="6 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GHMP_kinases_N" evidence="12">
        <location>
            <begin position="83"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP_kinases_C" evidence="13">
        <location>
            <begin position="205"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="90"/>
            <end position="100"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO58082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="322" mass="34732" checksum="679775A4E035FBA1" modified="2011-01-11" version="1">MTVLKTARVRVPASTANLGPGFDTLGMALSLYAWIELKEAEQTAFHLYGDQMNGVPQDKTNLIYKVAQMVFREAGVSVPELEISMYSDIPLTRGLGSSASAIVGALVAANTLIGSPLSDSKLFDMASAIEKHPDNVGASLFGGIITAVWDGKHAKHLRIEPDANLEVMVVIPDFQLSTSKAREVLPTHVSLKDAVYNISHASMLVAALASGRTDLIAEAMRDQLHQPYRAALVPGMTEILQNAYHYGALGVALSGAGPTLLALTDQRENRKAELEQYLTETMNKEGITASVLNLRPEIEGAKVYTEGNTHPFMDMIKGELTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E907</accession>
    <name>E3E907_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Peptide ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PPSC2_24715</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373747.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12210"/>
    <dbReference type="EnsemblBacteria" id="ADO59214">
        <property type="protein sequence ID" value="ADO59214"/>
        <property type="gene ID" value="PPSC2_24715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5236"/>
    <dbReference type="eggNOG" id="COG0747">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017028_7_5_9"/>
    <dbReference type="OMA" id="DWGAMGW"/>
    <dbReference type="OrthoDB" id="162819at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="1" id="KW-0564">Palmitate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168078" evidence="4">
        <location>
            <begin position="34"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="93"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="527" mass="58223" checksum="5D4820DA4210EC2B" modified="2011-01-11" version="1">MIGNRNRRSWFICTGLLLLMAVMALSGCGTATKTEDSSGKGENTPAQQTPAGKKLVMAYTWKPSGVDPHGDNSWDVMRSGAGETLIRLNEKLEPVAWLAKEWKHDSPNVWTFSLQDKVTFHDGKSMDAVSVKASLLRSIEKSHLAKDLLDVKSIDVNGPLTLKITTNQPNAALASNLADPSTIVLDVESMKDEQSYPAMTGAFKIKAFNKDQSLVVERYDGYWGEKARLAEATMKFITDGNSRLMALQSGEVDVATDIPVDNAGVLKKNDKLQVLSAPSLRTHMIVYNMESPVFKDATNRKVVDSLIPRASIVSAVMRGFGTEASSPFPSILPFGKIERKALNGTAEQLLTKDGWQKDAQGTWSKQGKPFEVTLLTFPQRPELSVMAEVIQSQLLNEGIQVKIRKVENIDEALTKNDWDFAMYSMLTAHTGEPQYFMDMFYSSTSEANVSRYASKPLEDILNSLKLAKDTAQRNAVTLQALDIINTDLPQSFIVHPDNVFGVKKGVEGFTPHPIEYYYITAQSDIAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9D4</accession>
    <name>E3E9D4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">est</name>
        <name evidence="1" type="ORF">PPSC2_16145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371993.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3450"/>
    <dbReference type="EnsemblBacteria" id="ADO57407">
        <property type="protein sequence ID" value="ADO57407"/>
        <property type="gene ID" value="PPSC2_16145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3448"/>
    <dbReference type="eggNOG" id="COG1075">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_327586_0_0_9"/>
    <dbReference type="OMA" id="THETITH"/>
    <dbReference type="OrthoDB" id="1875761at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008374">
        <property type="term" value="F:O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003386">
        <property type="entry name" value="LACT/PDAT_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02450">
        <property type="entry name" value="LCAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="873" mass="99938" checksum="1D88ED82D3E031EA" modified="2011-01-11" version="1">MTGKPYVIFIPGIKGSDLWEGGNKRWFPKNLEDVEALNICNPMKAKSPLSVVNGFNIYFKRIYRGILKEFSSEEAEMFPYDWRLDINLTADELVSTITRLNAKHDNIHLVAHSMGGMIAKIAILKMDGLGISSMVKKLTTLGTPWHGAPDSYKALSFGEPGFFQDFTNIFEMFDDKKTRDLARQLPSVYQLLPSEHYFNDHKEGKFLLQNEDDNSDKVITYQDVQMKAQNFYDELVGTHGVVSNVWNDFMSPIQTMMLQSIPPHIEHDNLIGCQIPTLYELPIESNKTRYPFKRDCKFENGDGVVPVFSATPAHAANLYYCPVQHTKMGSEKEVIKFIRWSLSGKQGDMPLGIHEEENTDLFRKGVFAKIMCPVDSTILDEENRYVAGVFDPNIEEISPYAIEGNVTYINIGQAKYVYFDETIKDDMIIKINSYDNGVADISVKIYDEDSVKEEKFDPIPVSDETSATMRIPLSNKNTETSLRVDSSTIEPKVIRRKKVEEVSKVQNDLPQVKIKISNQRQKVKYRQVYSGLVTLFLDVDQPENIASLFYTVDGGKPKRYLEPVDLNLDSGAHTIEAFGKDNFNRSIKTKKFTFNVDGRNPSTKLIVALDPEGIDLSFKPLTNGARADSYYRVDSEGEFKKFESSGKVNLSPAKLRRDPNSFYEIEYYSVNEFGKQGDIESLKLSLGNIPILMWEEYSSATQPIMIWENILKYETLDIYDFEIVLLGKGSKVSRRVTPNQDIPDNIRSVKFNSDSLELDIRFLEKYSLYFYGAPTEVLEVGEEYDFSFELISERTHETITHTRPRAKLVAVRTNKVPDKQLDLIEDDSGMFKGKFIVDEKFLEYRFKLVITDLKNVRPPLREIPLIMKEDEEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9E0</accession>
    <name>E3E9E0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371999.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3456"/>
    <dbReference type="EnsemblBacteria" id="ADO57413">
        <property type="protein sequence ID" value="ADO57413"/>
        <property type="gene ID" value="PPSC2_16175"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16175"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3454"/>
    <dbReference type="eggNOG" id="ENOG50334XF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_159118_0_0_9"/>
    <dbReference type="OMA" id="VVKMAFG"/>
    <dbReference type="OrthoDB" id="1811131at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022225">
        <property type="entry name" value="Phage_tail_fibre"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12571">
        <property type="entry name" value="DUF3751"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="129" mass="14009" checksum="7CBC19696AB82233" modified="2011-01-11" version="1">MADQILTITTAYAREQMARARAEGSTLTKVVKMAFGSGGVDTEGKPLPLDGTEQALKAELLQKDISSFEFIAPATIRYVCSLAEAELAGKTINELALIDSAGKLTAIRTMTNKIKDADMEFIFEIDDIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9G6</accession>
    <name>E3E9G6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_17025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57597.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886011.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57597">
        <property type="protein sequence ID" value="ADO57597"/>
        <property type="gene ID" value="PPSC2_17025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3636"/>
    <dbReference type="HOGENOM" id="CLU_1747838_0_0_9"/>
    <dbReference type="OrthoDB" id="2047606at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57597.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="154" mass="18272" checksum="40FC99AF75C299CE" modified="2015-05-27" version="2">MPLVFILNAALMISVIHLIRKLRPLWCALILIPTILLSIWNTILFYPQEFSPSIPKQIKYSVTAILHYDDLTPADWEEYTYRPSRTGESEKYIVALYKYKGQVPLDGTTYFYNDTDYHKDHPIRSLSDIPSELEPHHQFIWWLLQTFEKRTRAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9X4</accession>
    <name>E3E9X4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidoglycan-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoVID</name>
        <name evidence="3" type="ORF">PPSC2_19440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ADO58107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06640"/>
    <dbReference type="EnsemblBacteria" id="ADO58107">
        <property type="protein sequence ID" value="ADO58107"/>
        <property type="gene ID" value="PPSC2_19440"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4147"/>
    <dbReference type="eggNOG" id="COG1388">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016531_0_0_9"/>
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    <dbReference type="OrthoDB" id="1182331at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="LysM_dom"/>
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        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="LysM"/>
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    </dbReference>
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    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysM" evidence="2">
        <location>
            <begin position="399"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="350"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="356"/>
            <end position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="443" mass="50649" checksum="7792EA63053E0139" modified="2011-01-11" version="1">MNKQQNDQPQGLRFDIYERIHLTEEAAGIAELEEIELLPRIQVVTHGDHAALRGHLLLEGVYRTPEQITSELHHLIPVEITIPLNRVGRLEDISVEIENFDVDLLSLRSLNITGVLSLHGVESSHAEETAVWLDEEFTVVHAPEHPAPSLSGDGEHRHEEAYSTQDSAFNNYTDSETSYTVAAQQESAYWEQSSEDQLEQMSSLEQQTYDPIVDPNRYYEPWTGKAIEDSSSEVKHEQESPEVWGIQQEAVGTVGDEPKVSSTSPNVAYDSLLSEPHSDTESEIYLEPQLEASQGNDFDFRPEASEQVNHEVHDTFTEEKPEMRVAFNSKKDEGADEPDPVVYSSLLQSSRSVKEAEHQQQLEHEPQGQDQKVDEEREDAKWKNLFFHTQDETPFRKVRLCIVQREDTLETIADRYQLSTRELQLYNRLAEHHVEEGQVLYIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAM2</accession>
    <name>E3EAM2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ferredoxin--nitrite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nirA</name>
        <name evidence="5" type="ORF">PPSC2_22735</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10250"/>
    <dbReference type="EnsemblBacteria" id="ADO58780">
        <property type="protein sequence ID" value="ADO58780"/>
        <property type="gene ID" value="PPSC2_22735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4814"/>
    <dbReference type="eggNOG" id="COG0155">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
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    <dbReference type="OMA" id="MGMTHGD"/>
    <dbReference type="OrthoDB" id="1588103at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="F:oxidoreductase activity"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005117">
        <property type="entry name" value="NiRdtase/SiRdtase_haem-b_fer"/>
    </dbReference>
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        <property type="entry name" value="Nit/Sulf_reduc_fer-like_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
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        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006066">
        <property type="entry name" value="NO2/SO3_Rdtase_FeS/sirohaem_BS"/>
    </dbReference>
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        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="2"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="SIROHAEM"/>
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    </dbReference>
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        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NIR_SIR_ferr" evidence="4">
        <location>
            <begin position="61"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="3">
        <location>
            <begin position="136"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR_ferr" evidence="4">
        <location>
            <begin position="313"/>
            <end position="376"/>
        </location>
    </feature>
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        <location>
            <begin position="393"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="541" mass="60296" checksum="C7B1A5C0E7D80EF9" modified="2011-01-11" version="1">MAYEPIWNAHPDKLNKFELVKLEKDGLDVIRTIIESYAHKGYDSITADDMDRFKWAGVYQQKPKDGHFMMRVRINTGIMTSAQARALADISALYGRGLVDVTTRQAIQFHWLTVESLPDIFERLEKVGLYSFEACGDCPRTIVGNPLAGIDPNELVDTQEIVDEVNRFFLLNRDFSNLPRKYKMSISSNTYNNAQAEINDLSFTPATKILDGKEVVGFHVMVGGGLSAKPHLAHPLDLFVRPEEVLKVAIAVTTIFRDYGYREKRHHARLKFLIADWGPDKFLAKLTEYTGEMPGRGEDKTIGWQAAYFDGIHPQAQEGLNYVGLNVPVGRLSANELHELADLADRYGDGQIRTTMSQNILLSGVPDDQVDELLKAPVLQRLTPQPKHFMSRTVSCTGNEFCNLAIVETKKRAVDVAEYLDQHVQLDEKVRIHFIGCPNSCGQKHIADIGLQGSLLKTPEGMVDAFDIAVGGALGAGAQFNKTLKGRVRGDQVGPVLAELILFYKENRIAGESFYAYVQRVGIPSFQEKLSAILQSSHVAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB90</accession>
    <name>E3EB90_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptide chain release factor 3</fullName>
            <shortName evidence="6">RF-3</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">prfC</name>
        <name evidence="8" type="ORF">PPSC2_20890</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372991.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08120"/>
    <dbReference type="EnsemblBacteria" id="ADO58422">
        <property type="protein sequence ID" value="ADO58422"/>
        <property type="gene ID" value="PPSC2_20890"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20890"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4456"/>
    <dbReference type="eggNOG" id="COG4108">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_002794_2_1_9"/>
    <dbReference type="OMA" id="GFVFKIH"/>
    <dbReference type="OrthoDB" id="164090at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006449">
        <property type="term" value="P:regulation of translational termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04169">
        <property type="entry name" value="RF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3280">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00072">
        <property type="entry name" value="Rel_fac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004548">
        <property type="entry name" value="PrfC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032090">
        <property type="entry name" value="RF3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038467">
        <property type="entry name" value="RF3_dom_3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041732">
        <property type="entry name" value="RF3_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43556">
        <property type="entry name" value="PTHR43556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16658">
        <property type="entry name" value="RF3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00503">
        <property type="entry name" value="prfC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="7">
        <location>
            <begin position="13"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="22"/>
            <end position="29"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="90"/>
            <end position="94"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="144"/>
            <end position="147"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="526" mass="59643" checksum="67A480EFEC844FAF" modified="2011-01-11" version="1">MSKTTDILQQEVDKRRTFAIISHPDAGKTTLTEKLLLFGGAIRLAGTVKARKASKHATSDWMEIEKQRGISVTSSVMQFDYNGHRVNILDTPGHQDFSEDTYRTLTAADSAVMLIDVAKGVEAQTIKLFQVCAKRGIPIFTFINKLDREGRSPFDLMEELEQVLGIRSVPMNWPIGTGRDLCGVYDRVKNQVELFQGDDHSTIKVQKVEGYNDPIIREMAGEYLHDQLCQDLELLDVAGDPFDMEKVQRGELTPIFFGSAINNFGVQTFLENFLQLAPKPEPRHSTVGEIQPTNEKFTGYVFKIQANMNPAHRDRIAFLRIVSGKFQRGMSVKHVRMGKEIKLSQPQQFLAQDRDIVEEAFPGDIIGLFDPGIFRIGDSLSQGSEVVFDELPTFSPEIFAKVTVKNALKHKQYLKGIDQLTEEGMIQVFRTVSFDDTLLGVVGQLQFEVFEYRMKGEYGVDVQLQRMPFQFARWIVDEQIDPSKFRINSTLVKDKKGNYVALFENEYAMRTAIEKNPTAKFLEMAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBB5</accession>
    <name>E3EBB5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Protein liaG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">liaG1</name>
        <name evidence="4" type="ORF">PPSC2_21090</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58447.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324718.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08320"/>
    <dbReference type="EnsemblBacteria" id="ADO58447">
        <property type="protein sequence ID" value="ADO58447"/>
        <property type="gene ID" value="PPSC2_21090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4484"/>
    <dbReference type="eggNOG" id="COG3595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032798_0_0_9"/>
    <dbReference type="OrthoDB" id="1502911at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025164">
        <property type="entry name" value="DUF4097"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13349">
        <property type="entry name" value="DUF4097"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4097" evidence="3">
        <location>
            <begin position="207"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="428"/>
            <end position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58447.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="467" mass="50818" checksum="1753FDAB15D850B7" modified="2015-05-27" version="2">MHRKIRVGRYTSSLLLMAVGILLIVDVLQNTEYMLQLLVWWPVIFVLWGLEYLIFFGVYYRKEGKPDNGRRFRPDLKGILSALVVAASVFIVTQQNHYMYLWNRVSLNLTSASMDFSQAKENRYDMGGVLVPVTMQTSDLVVDSVNGDITLIRRPVSNIEVRGTLWVDQAPAAEADKIAQASSLTSTDGKTIQIRPEVQSYGASSKRQPRMNMLITVPEDRRFNMQIRTSNGNITLNGVDAIDSIRLESGNGNLTVNDAIGNVKGGTLNGQIKLHRISGDVDVRTNRGDMQAGDIEGAVSLHTMVGDIQVARSEGDITVDTQNGDMNVLNSTAKLNANSLNGAIKVHSEQVGGDWKIYSAVGDIVLDLPSSGDFQLEGSSSYGNLQSDFPFKIDSKSISGQNGDGKYVISVEGNSNLTIKKLLMPSLPDLDDSGGSTVPDATGISPDEAEVPVNDTSIGTSRDNTAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBG7</accession>
    <name>E3EBG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydfI</name>
        <name evidence="7" type="ORF">PPSC2_22010</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373207.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09160"/>
    <dbReference type="EnsemblBacteria" id="ADO58641">
        <property type="protein sequence ID" value="ADO58641"/>
        <property type="gene ID" value="PPSC2_22010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4681"/>
    <dbReference type="eggNOG" id="COG2197">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_90_1_9"/>
    <dbReference type="OMA" id="DVWVPPD"/>
    <dbReference type="OrthoDB" id="930905at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="4"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="5">
        <location>
            <begin position="147"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="216" mass="24218" checksum="2099A190980E796F" modified="2011-01-11" version="1">MKYKILIVDDHWVVREGLKLVLETNDSYEVIGEAGEGATALKLIEELQPDVILLDLYMPQMSGLDTMKALREKQNETPVIILTTYNEDDLMIKGLSLGAKGYLLKDTSRENLFRTIESALRGETLLQPEITARVFAATNKKEAKLESRESSLVLTDKERHILKSVAHGFKSKEIAFDMGISERTVKAHLTNIYNKLGVDSRSEAVAVSLERGILQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBR0</accession>
    <name>E3EBR0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.187</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">N-acetylmannosaminyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">UDP-N-acetylmannosamine transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">UDP-N-acetylmannosamine:N-acetylglucosaminyl pyrophosphorylundecaprenol N-acetylmannosaminyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tagA3</name>
        <name evidence="3" type="ORF">PPSC2_23170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>N-acetyl-alpha-D-glucosaminyl-di-trans,octa-cis-undecaprenyl diphosphate + UDP-N-acetyl-alpha-D-mannosamine = H(+) + N-acetyl-beta-D-mannosaminyl-(1-&gt;4)-N-acetyl-alpha-D-glucosaminyl di-trans,octa-cis-undecaprenyl diphosphate + UDP</text>
            <dbReference type="Rhea" id="RHEA:16053"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:62959"/>
            <dbReference type="ChEBI" id="CHEBI:68623"/>
            <dbReference type="ChEBI" id="CHEBI:132210"/>
            <dbReference type="EC" id="2.4.1.187"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cell wall biogenesis; teichoic acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyltransferase 26 family. TagA/TarA subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.187" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373416.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10655"/>
    <dbReference type="CAZy" id="GT26">
        <property type="family name" value="Glycosyltransferase Family 26"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58878">
        <property type="protein sequence ID" value="ADO58878"/>
        <property type="gene ID" value="PPSC2_23170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4907"/>
    <dbReference type="eggNOG" id="COG1922">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_063203_3_1_9"/>
    <dbReference type="OMA" id="PWRWRRM"/>
    <dbReference type="OrthoDB" id="1759731at2"/>
    <dbReference type="UniPathway" id="UPA00632"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047244">
        <property type="term" value="F:N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019350">
        <property type="term" value="P:teichoic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06533">
        <property type="entry name" value="Glyco_transf_WecG_TagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02070">
        <property type="entry name" value="TagA_TarA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034714">
        <property type="entry name" value="TagA_TarA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004629">
        <property type="entry name" value="WecG_TagA_CpsF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34136">
        <property type="entry name" value="PTHR34136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03808">
        <property type="entry name" value="Glyco_tran_WecG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00696">
        <property type="entry name" value="wecG_tagA_cpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0777">Teichoic acid biosynthesis</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="253" mass="28307" checksum="ACCDAFB31FBB43F0" modified="2011-01-11" version="1">MTVDKVTSVPTVPIFGVQVSRLNMKDTLNVLIQAVKSRRPHQVITANPIMVMAALEDPVYMNVMKQAELIVPDGTGVVWAANYVGHPVPERVAGFDLLHELLAAGENYHWKVYLLGSTPEVIQATAQRVHELYPGITVCGKRDGFFGPNEDEAVIRAIREANPDLLFVARGADTQEPWIGKYKEQLGVPVMMGVGGSFDVISGKTKRAPKLFQKLRAEWVYRLLKEPSRYRRMLALPKFAVKVMREKENVTKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBS2</accession>
    <name>E3EBS2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">spoIIQ</name>
        <name evidence="4" type="ORF">PPSC2_23220</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373427.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10705"/>
    <dbReference type="EnsemblBacteria" id="ADO58890">
        <property type="protein sequence ID" value="ADO58890"/>
        <property type="gene ID" value="PPSC2_23220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4917"/>
    <dbReference type="eggNOG" id="COG0739">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_077337_1_0_9"/>
    <dbReference type="OMA" id="FFRKRWV"/>
    <dbReference type="OrthoDB" id="1891666at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M23" evidence="3">
        <location>
            <begin position="142"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="27096" checksum="608750A3A95F18F3" modified="2011-01-11" version="1">MSEQNKNQNQNHEDTPKTFQGGRASRPSSWKKLLSKRWAYPAAYIAAAAIILTLVWVYQDASQKSFKPDPASPSVQSTSAVSTDVNEQQPESVEVVAQSENIAWPVADASAVQVVKPFFDENATADEQAAAMVEYDKTFTANTGIDLSRSDDQAFEVRAALSGKVSRVEQHPLVGNVVEITHDNNLKTVYQSLSDLKVKEGDQVKQNDVIASAGRNELEKDLKTHLHFEVYQDDKPVNPAGLLPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBZ5</accession>
    <name>E3EBZ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373654.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5181"/>
    <dbReference type="EnsemblBacteria" id="ADO59119">
        <property type="protein sequence ID" value="ADO59119"/>
        <property type="gene ID" value="PPSC2_24280"/>
    </dbReference>
    <dbReference type="GeneID" id="66575210"/>
    <dbReference type="KEGG" id="ppm:PPSC2_24280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5141"/>
    <dbReference type="eggNOG" id="COG4760">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_074030_1_0_9"/>
    <dbReference type="OMA" id="VWIYLEM"/>
    <dbReference type="OrthoDB" id="1395601at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010539">
        <property type="entry name" value="UCP009160"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41282">
        <property type="entry name" value="PTHR41282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12811">
        <property type="entry name" value="BaxI_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009160">
        <property type="entry name" value="UCP009160"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="144"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="27451" checksum="D68FCA69854500BF" modified="2011-01-11" version="1">MSFSNPVLRDDIFLREDEREASEQRMTIGGTVNKTLLLLVLLIVSASITWYMTYQGTIEVLSLMTAGFIGMAGIALSISFFPKTAPLLSPVYAILSGFALGGVSAFMEYEYPGIVVNAILLTVGILFLMLFMYTQRIIKVTRGFISFVVLCTMAIFLVTLVDFILNFFGMNVPYIHETGWVGIGISLFIVIIAALNLLVDFNFVEEQADQGAPKYMEWYGAFALLVTLVWLYVRILDLLAKLSNRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBZ8</accession>
    <name>E3EBZ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yfmS3</name>
        <name evidence="4" type="ORF">PPSC2_24295</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373657.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11815"/>
    <dbReference type="EnsemblBacteria" id="ADO59122">
        <property type="protein sequence ID" value="ADO59122"/>
        <property type="gene ID" value="PPSC2_24295"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24295"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5144"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043276_0_0_9"/>
    <dbReference type="OMA" id="KTSMVPK"/>
    <dbReference type="OrthoDB" id="429006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="Methyl-accepting transducer" evidence="3">
        <location>
            <begin position="155"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="213"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="30608" checksum="77F927E2731F3AE5" modified="2011-01-11" version="1">MNTIDALIAAIPYIQQIMREKVTLALFDRTHVLAYTQSEGMNLGFETGSELLEGYKNFAMLKNGHEASLTHIPAELLGYPLDMISIPVFDDNGNVIAAFAASYNLTNRNQLDQIVSENHSITEQLIEMVQHVTAHSEELQATSEHILKNTQFAVQNSGKINQVAVFIKEISDQTNLLGLNAAIEAARVGEAGAGFGVVAQEVRKLSVESKKATVDIEGALKDVQNSIRQMEQEIEQIVASSQEQATLVGSFTEVMERMRKASETMQHLADNLTSYIVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC36</accession>
    <name>E3EC36_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YjzC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yjzC</name>
        <name evidence="2" type="ORF">PPSC2_25440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373906.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12935"/>
    <dbReference type="EnsemblBacteria" id="ADO59376">
        <property type="protein sequence ID" value="ADO59376"/>
        <property type="gene ID" value="PPSC2_25440"/>
    </dbReference>
    <dbReference type="GeneID" id="66574980"/>
    <dbReference type="KEGG" id="ppm:PPSC2_25440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5391"/>
    <dbReference type="eggNOG" id="ENOG50339XF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_191991_0_0_9"/>
    <dbReference type="OMA" id="LWTYQRK"/>
    <dbReference type="OrthoDB" id="1957788at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025549">
        <property type="entry name" value="YjzC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14168">
        <property type="entry name" value="YjzC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7426" checksum="ED4D8F6C352DC380" modified="2011-01-11" version="1">MGEKTEFVPGDKVPNDGVYMEVGEKSFHTEIQNPQQITLERGDSFPKTTNHNRKWKKKTKARVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECL2</accession>
    <name>E3ECL2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Phosphomethylpyrimidine synthase</fullName>
            <ecNumber evidence="10">4.1.99.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Hydroxymethylpyrimidine phosphate synthase</fullName>
            <shortName evidence="10">HMP-P synthase</shortName>
            <shortName evidence="10">HMP-phosphate synthase</shortName>
            <shortName evidence="10">HMPP synthase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Thiamine biosynthesis protein ThiC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">thiC</name>
        <name evidence="13" type="ORF">PPSC2_03980</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>5-amino-1-(5-phospho-beta-D-ribosyl)imidazole + S-adenosyl-L-methionine = 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + 5'-deoxyadenosine + CO + formate + 3 H(+) + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:24840"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:17245"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58354"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:137981"/>
            <dbReference type="EC" id="4.1.99.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="10">Binds 1 [4Fe-4S] cluster per subunit. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="10">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the ThiC family.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.17" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369420.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16785"/>
    <dbReference type="EnsemblBacteria" id="ADO54784">
        <property type="protein sequence ID" value="ADO54784"/>
        <property type="gene ID" value="PPSC2_03980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.791"/>
    <dbReference type="eggNOG" id="COG0422">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013181_2_1_9"/>
    <dbReference type="OMA" id="TWELFRD"/>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016830">
        <property type="term" value="F:carbon-carbon lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00089">
        <property type="entry name" value="ThiC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037509">
        <property type="entry name" value="ThiC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025747">
        <property type="entry name" value="ThiC-associated_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038521">
        <property type="entry name" value="ThiC/Bza_core_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002817">
        <property type="entry name" value="ThiC/BzaA/B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30557">
        <property type="entry name" value="PTHR30557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13667">
        <property type="entry name" value="ThiC-associated"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01964">
        <property type="entry name" value="ThiC_Rad_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00407">
        <property type="entry name" value="phosphomethylpyrimidine_syntha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00190">
        <property type="entry name" value="thiC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 10" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 10" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="5 10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ThiC-associated" evidence="12">
        <location>
            <begin position="32"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="329"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="370"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="10"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="309"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="409"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="413"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="436"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="477"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="557"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="560"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="565"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF13667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="604" mass="67641" checksum="D9E76CE2973AAD2C" modified="2011-01-11" version="1">MKSMETEGTKETGVKSTAVEKTSTEQASRVNSFPGSRKVYIQGSRPDIAVPEREIALHPTHTPQGIEYHEPLRVYDTSGPMTDEAYQVDIRQGLPPLRRAWALERGDVEAYDGRAVKPEDNGLKPGSKRETVEFPGVTNRPLRASQGRTVTQMHYARQGIITPEMEFAAIREGVEPEFVRQELAAGRAILPSNINHPESEPMVIGRHFHVKINANIGNSAVTSSIEEEVEKMTWAVRWGSDTVMDLSTGRNIHTTREWIIRNSPVPIGTVPLYQALEKVNGEAEKLTWELYRDTLIEQAEQGVDYFTIHAGVLLRYIPMTANRMTGIVSRGGSIMAAWCLAHHQENFLYTHFEEICEIMKTYDVAFSLGDGLRPGSIYDANDEAQFAELETLGELTQIAWKHDVQVMIEGPGHVPMHKIKENVDLQMEICKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTSMLCYVTPKEHLGLPNKDDVREGVITYKIAAHAADLAKGHPRAQQRDDALSKARFEFRWRDQFNLSLDPERALSYHDETLPAEGAKEAHFCSMCGPKFCSMRITQDIRAYAADKGLNTEEAVVAGMREKAEQYRDGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECM6</accession>
    <name>E3ECM6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_04040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369433.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16840"/>
    <dbReference type="EnsemblBacteria" id="ADO54798">
        <property type="protein sequence ID" value="ADO54798"/>
        <property type="gene ID" value="PPSC2_04040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.805"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031285_5_0_9"/>
    <dbReference type="OMA" id="YSKRGAC"/>
    <dbReference type="OrthoDB" id="447734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168137" evidence="1">
        <location>
            <begin position="24"/>
            <end position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="430" mass="47569" checksum="4A599D86011302B0" modified="2011-01-11" version="1">MGKKGWFLIIAMLLVLTTACSGADGGGNSGTSADGKVKLRIAWWGSDTRHEYTQKVIDLYKQKNPNVTIDVEYASFDDYWKKLAPQAAANQLPDIVQMDISYISQYAKNGQLEDMAPYLNQKIQVADVNENVLKTGIIAGKQYGIPTGVNVLGFQYDPALLKKAGIDKIPDDWTWDQYKELALKAASNKVYFDSSMAADIFFHYYLRTHGKSLYNTEGTGLGYDDDKLFVDFFGGLAELIKKGATPTPEVMNQTKGILEESDIVKGTGIGIWQWSNQYVGLQQVVNRPMALAPMFGPNMEKGVYMQPTMYWAVASRSQVKDEAAKFIDFWMNDVEANKLIKGERGVPISAKIKEAVAPELSEATKQVFEFVASMEPKASPMSPPPPVGSPEVIATLTDYIEQVNFGQMTPEDAAVKFRADANTILANNKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECS4</accession>
    <name>E3ECS4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">estA1</name>
        <name evidence="3" type="ORF">PPSC2_01875</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54368.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_051507721.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0384"/>
    <dbReference type="EnsemblBacteria" id="ADO54368">
        <property type="protein sequence ID" value="ADO54368"/>
        <property type="gene ID" value="PPSC2_01875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.377"/>
    <dbReference type="eggNOG" id="COG0657">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012494_6_4_9"/>
    <dbReference type="OrthoDB" id="1361074at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013094">
        <property type="entry name" value="AB_hydrolase_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07859">
        <property type="entry name" value="Abhydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168360" evidence="1">
        <location>
            <begin position="18"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="Abhydrolase_3" evidence="2">
        <location>
            <begin position="68"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54368.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="34405" checksum="D59C5EA0998E2443" modified="2015-05-27" version="2">MVRRLRQTLFVKLARRSAGRMITASDFKPSHSPKVHRTGKMIPTSVGDSRVIVYEPSLRSADPLPVFVNFHGSGFIMGSAEMDDPWCPVIAERANCVVVNVDYRLAPEHKFPIPLQESYDVTQWVYKHPNVLNIDPQRIAVGGHSAGGNLAAALCLMARDRKEFPIVYQVLDYPSLDIATDPKLKPQFEKAIPPRVAKIFNESYLRSPDEARNPLASPIYAESLHDLPPALIITAELDSLADEAELYAKRLIEADVPVMYKKYMGAAHAFTHSGDLAVAESAWHLMSDQLKLAFEFRIEDVLEDLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED20</accession>
    <name>E3ED20_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cobalamin biosynthesis protein CbiX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sirB</name>
        <name evidence="3" type="ORF">PPSC2_04465</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17295"/>
    <dbReference type="EnsemblBacteria" id="ADO54889">
        <property type="protein sequence ID" value="ADO54889"/>
        <property type="gene ID" value="PPSC2_04465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.894"/>
    <dbReference type="eggNOG" id="COG2138">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1061072_0_0_9"/>
    <dbReference type="OMA" id="MEYNEPS"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002762">
        <property type="entry name" value="CbiX-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01903">
        <property type="entry name" value="CbiX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="27390" checksum="4B6FF6BA0B7A9DA6" modified="2011-01-11" version="1">MEQVDQAVAKLQLLEEMPVEVSFLETVKGRLIQNGIDRLEALGVTDLLVIPLFVSSGSTHVDEISYALGVKAAPDKETDLEPFRLKARVHFGSPLDDGEDVARMVWDKVRPLSVDPAREVILLVGHGSAHNGFLQRWEQGISSLARTVQNVSGIITDHALLNPEGVHDKAAYWNQERGHDVIVAPLFLSSGYFTSHMIPKRLQGLDYRYLGDPLLPHPLLTSWMDRQIRELMQNMQKQARIDNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDB7</accession>
    <name>E3EDB7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-1036</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-1036</name>
        <name evidence="1" type="ORF">PPSC2_04485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369529.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0913"/>
    <dbReference type="EnsemblBacteria" id="ADO54896">
        <property type="protein sequence ID" value="ADO54896"/>
        <property type="gene ID" value="PPSC2_04485"/>
    </dbReference>
    <dbReference type="GeneID" id="66574073"/>
    <dbReference type="KEGG" id="ppm:PPSC2_04485"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.899"/>
    <dbReference type="eggNOG" id="ENOG502ZAJN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097479_1_0_9"/>
    <dbReference type="OMA" id="HPIVQYF"/>
    <dbReference type="OrthoDB" id="1392697at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="21867" checksum="527210294E202401" modified="2011-01-11" version="1">MSWSKLKQQLESFLSPALDGRVEYRSTSYRYFPDKSGTCYITVDKKNILNMNDITSPIKWYQTELEIKNDPDIQVPISNEEIEAIRKDTNGNVPEDRLQVIARGRKISEHAKELLSAQALLSKSNFNVVANKFLTTSIEDSLESNDILLNILALVDRRVGKKRILNMSEKMKLKHPIVQYFYELRRSTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDN8</accession>
    <name>E3EDN8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mtrR</name>
        <name evidence="6" type="ORF">PPSC2_06580</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369977.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19545"/>
    <dbReference type="EnsemblBacteria" id="ADO55346">
        <property type="protein sequence ID" value="ADO55346"/>
        <property type="gene ID" value="PPSC2_06580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1355"/>
    <dbReference type="eggNOG" id="COG1309">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069356_40_3_9"/>
    <dbReference type="OMA" id="PYQYEIM"/>
    <dbReference type="OrthoDB" id="1570162at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025996">
        <property type="entry name" value="TetR_C_WHG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13305">
        <property type="entry name" value="TetR_C_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="9"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="22464" checksum="43EA12DF629A0616" modified="2011-01-11" version="1">MARRAVEQELSRGRILEAARHLFITKGYRAISMRSIGQHLGYSHGSLYYHFKEKAELFYAIVIEDFNTLRGILLQAATGTPDDGLSRLEYLMLEYIRFGLENPYQYEIMFMMHDEELFAYCRTEQNRCVELFASMIRQELSGQGHSEEECSRVPKSLFLSMHGFVSFYIQDGLTFEEIRPAALAHVKLLCRQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDP2</accession>
    <name>E3EDP2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gntR7</name>
        <name evidence="5" type="ORF">PPSC2_06600</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369981.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19565"/>
    <dbReference type="EnsemblBacteria" id="ADO55350">
        <property type="protein sequence ID" value="ADO55350"/>
        <property type="gene ID" value="PPSC2_06600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1359"/>
    <dbReference type="eggNOG" id="COG1167">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_0_0_9"/>
    <dbReference type="OMA" id="VRAVYTM"/>
    <dbReference type="OrthoDB" id="1024978at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="21"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="502" mass="57047" checksum="D43F16DAE5D4B055" modified="2011-01-11" version="1">MGKDNSELLFSTEHISTDPGLKLYEQVVHYINVRMERGDWPADAKLPSVRSLAQELGVHRLTVFRAYQELKQQGRIYVKDKSGYYAHASHAAELGPFTTYSERSSTRRIFHSESTYMADDPSVSVWRGMDGLTQVHAMNADFQFSKALIDPSLLPNRYWRELMIQVFEKHPKIAATYSAVQGDAELRDAMAQHFSTDKHFAVSTDEVLITSGAQQAIDLVSRSLIRTGDRVLIERPAYGPAMEIFRRQGARLTVTDIRPEGYDMDHIEWCLKTEKPRLFYMNPTFHNPTGFMIPDEQRKRLPELAERYSCLIVEDDSTYDISFGQKPPSPIFAYDISGSVVYIRSYSKYVAPGLRIAAVTCRPQLMDSLLSVKALVDNGSPLLNQKLFLQYFQSPRMQQHIKKLCIALQIRKETMEASLRDSGWTWTSPAGGLNLWLQLPSTIKPNELLAKSIQESVSFVPGNVFDPIGAEGKTHIRLSYSYANELQIKEGLSTLLRISRMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDS9</accession>
    <name>E3EDS9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endospore coat-associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yheD3</name>
        <name evidence="1" type="ORF">PPSC2_00035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO53995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368649.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13050"/>
    <dbReference type="EnsemblBacteria" id="ADO53995">
        <property type="protein sequence ID" value="ADO53995"/>
        <property type="gene ID" value="PPSC2_00035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.7"/>
    <dbReference type="eggNOG" id="COG0189">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044334_2_0_9"/>
    <dbReference type="OMA" id="QWETTLI"/>
    <dbReference type="OrthoDB" id="1740489at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026838">
        <property type="entry name" value="YheC/D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38437">
        <property type="entry name" value="PTHR38437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14398">
        <property type="entry name" value="ATPgrasp_YheCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO53995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="31952" checksum="12D47ABA543CBB42" modified="2011-01-11" version="1">MSIQRVSSKWAKTNAILPHPTLAAYIPETRLYTFEHLNEMLAVYGTVYIKPDNGTYGKGVMRAERQTEQLPPTEEGIIEERTWYVLRYEVDILTFESLDELHRVVSSRIKKRPYLIQRGIPLLQHEARPFDLRVLTQMNLRHQWETTLIVGRVAAPDKVVTNHHSGGTTRFFNELVAPYMDVKEAVRLEQKLSKMGERVAWQLQKRYPRLREIGLDVGLDQQNYPWILEVNTRPAIKVFASLPNKSLYHKIFRYAVGYGRYTASTGKPVRSKKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEE9</accession>
    <name>E3EEE9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypgQ</name>
        <name evidence="2" type="ORF">PPSC2_06830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370031.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19800"/>
    <dbReference type="EnsemblBacteria" id="ADO55400">
        <property type="protein sequence ID" value="ADO55400"/>
        <property type="gene ID" value="PPSC2_06830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1407"/>
    <dbReference type="eggNOG" id="COG1418">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036524_2_2_9"/>
    <dbReference type="OMA" id="GHDWFHI"/>
    <dbReference type="OrthoDB" id="1798994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="1">
        <location>
            <begin position="35"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="227" mass="26241" checksum="17B7AE9BC872A403" modified="2011-01-11" version="1">MNRRTEQQEAIRVNIIQKAEPYVQQQLEHDHSGHDWWHIDRVRKLSIELAAKEGADPFVCELAALLHDVADEKLNDSKQAGLDKVEQWLHLHVNDPDVITHVMTIIATMSYNGGQNPPMETLEGQVVQDADRLDALGAIGIARTFMYAGSKGSIMHEPGQDYSQYEYRAAGKSAIYHFYEKLLKLKDLMNTTYARELAEVRHQWMEMYLEQFYREWNVNDIQQNRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEJ0</accession>
    <name>E3EEJ0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Translation initiation factor IF-3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">infC</name>
        <name evidence="8" type="synonym">infC1</name>
        <name evidence="8" type="ORF">PPSC2_07025</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 5">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the IF-3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007429515.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20005"/>
    <dbReference type="EnsemblBacteria" id="ADO55441">
        <property type="protein sequence ID" value="ADO55441"/>
        <property type="gene ID" value="PPSC2_07025"/>
    </dbReference>
    <dbReference type="GeneID" id="66573531"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1449"/>
    <dbReference type="eggNOG" id="COG0290">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054919_3_2_9"/>
    <dbReference type="OMA" id="RNMIMFL"/>
    <dbReference type="OrthoDB" id="1760144at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00080">
        <property type="entry name" value="IF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036788">
        <property type="entry name" value="T_IF-3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036787">
        <property type="entry name" value="T_IF-3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019813">
        <property type="entry name" value="Translation_initiation_fac3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001288">
        <property type="entry name" value="Translation_initiation_fac_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019815">
        <property type="entry name" value="Translation_initiation_fac_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019814">
        <property type="entry name" value="Translation_initiation_fac_3_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10938">
        <property type="entry name" value="PTHR10938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00707">
        <property type="entry name" value="IF3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05198">
        <property type="entry name" value="IF3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54364">
        <property type="entry name" value="SSF54364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55200">
        <property type="entry name" value="SSF55200"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00168">
        <property type="entry name" value="infC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00938">
        <property type="entry name" value="IF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4 5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3 4 5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IF3_N" evidence="7">
        <location>
            <begin position="2"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="IF3_C" evidence="6">
        <location>
            <begin position="78"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="19165" checksum="3987984AD5B1AA7E" modified="2011-01-11" version="1">MINDEIRVREVRLVGANGEQIGIKPTREALQMAIDANLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRSNIEEHDYQTKFRNVVKFLNEGDKVKCSVRFRGREITHANVGQKILERVKTEVADLCTVERQPKLEGRSMIMILAPKSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEJ8</accession>
    <name>E3EEJ8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_07060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370077.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20040"/>
    <dbReference type="EnsemblBacteria" id="ADO55449">
        <property type="protein sequence ID" value="ADO55449"/>
        <property type="gene ID" value="PPSC2_07060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1457"/>
    <dbReference type="eggNOG" id="ENOG50338JW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_169650_0_0_9"/>
    <dbReference type="OMA" id="QYGPYTD"/>
    <dbReference type="OrthoDB" id="1982946at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="12448" checksum="2B5B5604CF1389BA" modified="2011-01-11" version="1">MKQAVTRKQVEKLVGKVIFATRKDGSRVSGKLIRISGNRLILQPNRKKKVNTKAIIPLVLFDLLAIGTAPYVGAYGGYGPGYGGPGYGGPGYGPQYGPYTDGGYPGVGYPFYPNFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEM5</accession>
    <name>E3EEM5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_08215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370335.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20820"/>
    <dbReference type="EnsemblBacteria" id="ADO55712">
        <property type="protein sequence ID" value="ADO55712"/>
        <property type="gene ID" value="PPSC2_08215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1727"/>
    <dbReference type="eggNOG" id="ENOG5031KY3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1577750_0_0_9"/>
    <dbReference type="OMA" id="IWLEAKE"/>
    <dbReference type="OrthoDB" id="1715097at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="19567" checksum="E692176491A2DAA3" modified="2011-01-11" version="1">MRVPPFERLRPFMQLSSVFVLGMITGGMIYNAIWHASFNQLWVNNQDLQFQLQQAEEDNKTLRKYSKRQTVIKEIKLIAEEASAEKIDSINLKELLRRVSRDLEVLRGRDMFEIDSDSKLVRMLLHQKKYTVRDKEYTIQVKTMLVMEGVLQIWLEAKERLPQSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEQ7</accession>
    <name>E3EEQ7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Dephospho-CoA kinase</fullName>
            <ecNumber evidence="1">2.7.1.24</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Dephosphocoenzyme A kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">coaE</name>
        <name evidence="2" type="ORF">PPSC2_08365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3'-dephospho-CoA + ATP = ADP + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18245"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57328"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 5/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the CoaE family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.24" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370364.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20970"/>
    <dbReference type="EnsemblBacteria" id="ADO55744">
        <property type="protein sequence ID" value="ADO55744"/>
        <property type="gene ID" value="PPSC2_08365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1758"/>
    <dbReference type="eggNOG" id="COG0237">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_057180_0_0_9"/>
    <dbReference type="OMA" id="QMDIEQK"/>
    <dbReference type="OrthoDB" id="1515383at2"/>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00356"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004140">
        <property type="term" value="F:dephospho-CoA kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00376">
        <property type="entry name" value="Dephospho_CoA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001977">
        <property type="entry name" value="Depp_CoAkinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01121">
        <property type="entry name" value="CoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00152">
        <property type="entry name" value="TIGR00152"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51219">
        <property type="entry name" value="DPCK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="10"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="198" mass="22129" checksum="287571EE3D4FCB3F" modified="2011-01-11" version="1">MNIGLTGGIATGKSTVSALLVAKGALLIDADAIAREVMLPGHPVLAAVIQHFGQAIVNSDGTLHRKRLGEIVFGDPVQRQALNDITHPAIREEMRLRMEAYEREQPDKLVLADIPLMYESGLESLYEEIMVVYVPRDIQLRRLMLRDGLTEEQAELRLSAQMDIEQKKSLADIVIDNSGTQTETKRQIDQFWQRKGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFJ0</accession>
    <name>E3EFJ0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370108.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1504"/>
    <dbReference type="EnsemblBacteria" id="ADO55481">
        <property type="protein sequence ID" value="ADO55481"/>
        <property type="gene ID" value="PPSC2_07200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1487"/>
    <dbReference type="eggNOG" id="COG1653">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_129276_0_0_9"/>
    <dbReference type="OMA" id="PVEQMKM"/>
    <dbReference type="OrthoDB" id="1683758at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="189" mass="20995" checksum="D04550E4D1435A37" modified="2011-01-11" version="1">MRAGLKRISPWIIGIIALVLLAGCGGRDKDSFSIFIMDKGDASVIRDELAQKLKDKLGEQAPTIEISVSPLYNQQKLVVEYAAGEHDLFLLPEEDMKLYGQNGSNLPLDDAFDKKTYARGVFEGGVFKKKEQGEEGTDVIKATHLFGIPVEQMKMFKDLKYNSNTLFATVPPRTSNKEEAIKVLKALTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFM7</accession>
    <name>E3EFM7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein prkA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">prkA</name>
        <name evidence="2" type="ORF">PPSC2_07370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370145.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20350"/>
    <dbReference type="EnsemblBacteria" id="ADO55518">
        <property type="protein sequence ID" value="ADO55518"/>
        <property type="gene ID" value="PPSC2_07370"/>
    </dbReference>
    <dbReference type="GeneID" id="66573463"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1524"/>
    <dbReference type="eggNOG" id="COG2766">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028588_2_0_9"/>
    <dbReference type="OMA" id="DFYGMED"/>
    <dbReference type="OrthoDB" id="49410at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013153">
        <property type="entry name" value="Prk_AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010650">
        <property type="entry name" value="PrkA_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016230">
        <property type="entry name" value="Ser_kinase_PrkA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08298">
        <property type="entry name" value="AAA_PrkA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06798">
        <property type="entry name" value="PrkA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000549">
        <property type="entry name" value="Ser_prot_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00763">
        <property type="entry name" value="AAA_PrkA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_PrkA" evidence="1">
        <location>
            <begin position="21"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="631" mass="73062" checksum="C26A26004AE1E826" modified="2011-01-11" version="1">MNIFDRLAEYRAENNRLAWNGTFREYIEILKKDPTPAMTAHARVYKMIESFGVEEVGGHKRYKFFEQEIFGLDRALEKLVEEYFHSSARRLDVRKRILLLMGPVSGGKSTLVTLLKRGLEKFSRTDQGAVYAIEGCPMHEDPLHLIPHELRPEFEKELGVRIEGNLCPSCQMRLRTEFDGDIEKVRVERVFISEENRIGIGTFSPSDPKSQDIADLTGSIDFSTITEYGSESDPRAYRFDGELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADELIVAHTNESEYKSFIANKKNEALQSRMIVMPIPYNLKVSEEEKIYAKLIEQSDMRHIHIAPHALRTAAIFSVLTRLKETKKQGMDLVKKMRMYDGEEVEGYKEADLKEMQHEFLEEGMSGVDPRYVINRISSALIKQNVESINALDILRAIKDGLDQHASITKEERERYLNFISVARKEYDELAKKEVQKAFVYSFEESAKTLFDNYLDNIEAFCNWAKIRDPLTDEELDPDERLMRSIEEQIGVSENAKKAFREEILIRISAYSRKGRKFEYHHHDRLREAIEKKLFADLKDIVKITTSTKTPDANQLKRMNEVIKRLIEEHGYTGASANDLLRYVGSLLNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFP3</accession>
    <name>E3EFP3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yvrH</name>
        <name evidence="9" type="ORF">PPSC2_07445</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55534.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599581.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20420"/>
    <dbReference type="EnsemblBacteria" id="ADO55534">
        <property type="protein sequence ID" value="ADO55534"/>
        <property type="gene ID" value="PPSC2_07445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1539"/>
    <dbReference type="eggNOG" id="COG0745">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_30_4_9"/>
    <dbReference type="OrthoDB" id="817710at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="5"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="8">
        <location>
            <begin position="133"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="6">
        <location>
            <begin position="133"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55534.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="239" mass="27523" checksum="20DB1B12C2456E64" modified="2015-05-27" version="2">MEEIAVLIVDDEQGLRDMLTKVLKKEGFLHVKHAATGQEALQIVMESRIDVIVLDVMLPDNDGFEVCRQMRLYTEVPILFLTARDTDLDKLMGFGIGGDDYITKPFNPLEVVARMKARMKYRNVTTADMKPALQTLDFGYFCLELESGALYVQDQEVDCPAREWLLLVFLCKHPNRIFSVRQLYEAIWSETFLGDEKTVVIHISRLRKKIEPDPKHPQFLVNVRGLGYKMISVKRGEQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG55</accession>
    <name>E3EG55_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09995</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370699.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22465"/>
    <dbReference type="EnsemblBacteria" id="ADO56088">
        <property type="protein sequence ID" value="ADO56088"/>
        <property type="gene ID" value="PPSC2_09995"/>
    </dbReference>
    <dbReference type="GeneID" id="66577916"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2105"/>
    <dbReference type="eggNOG" id="ENOG5033AV1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_149313_0_0_9"/>
    <dbReference type="OMA" id="AFVLRWT"/>
    <dbReference type="OrthoDB" id="1909324at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="137" mass="14973" checksum="3238630A5C373D05" modified="2011-01-11" version="1">MLFGSLRINLWSGVVGFILTFVLSVGSNLLTTSLIRGLIAFVFWFLLAFVLRWTLGVVARPDLGNAQDRASSQVDGVGGNLDLTTPDENENLNELLKPKPEQTDEGNNGFAPLNPPKLVSNKDPEELAKAVRHLTDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG82</accession>
    <name>E3EG82_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_10820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370881.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2303"/>
    <dbReference type="EnsemblBacteria" id="ADO56275">
        <property type="protein sequence ID" value="ADO56275"/>
        <property type="gene ID" value="PPSC2_10820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2292"/>
    <dbReference type="eggNOG" id="ENOG5033WVY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_820948_0_0_9"/>
    <dbReference type="OMA" id="WNSITAT"/>
    <dbReference type="OrthoDB" id="1550516at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169207" evidence="1">
        <location>
            <begin position="33"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="338" mass="37410" checksum="3C7F7919C7B36F87" modified="2011-01-11" version="1">MNKWNSITATVAALSILLGTAPVVMAQQPAAATTTASNAQTSVNLDPTATKRLTDVLNTLAGKQTIEFTSADTDAWTVYGTLKGTANADFIQNYDSKKGIVQSTSIIYKAADMDKVMPPNLRSKVASFLKTFDTDKVFKIEAIWRVYSPIDEGGFKNYWVLWGKNQSIYIHLDQGNKITASFLYSLKDVKAALTNKANRSLKTLGIPTTKPFEYTLRQQEKNDTVWHFRDEDDINSVQIGVKTGKVWAVKNEYGKDWDGDKDFAKAFAKPKLSKNQALSAAKSKVQSFFGINLKGYIVQIKKNEYTFLKKGAATVVGKINKKGVFYSLEAIPANGIRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG83</accession>
    <name>E3EG83_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phage infection protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pip</name>
        <name evidence="3" type="ORF">PPSC2_10825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370882.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23245"/>
    <dbReference type="EnsemblBacteria" id="ADO56276">
        <property type="protein sequence ID" value="ADO56276"/>
        <property type="gene ID" value="PPSC2_10825"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10825"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2293"/>
    <dbReference type="eggNOG" id="COG1511">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004534_2_0_9"/>
    <dbReference type="OMA" id="EMSKNTT"/>
    <dbReference type="OrthoDB" id="1240965at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017501">
        <property type="entry name" value="Phage_infect_YhgE_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017500">
        <property type="entry name" value="Phage_infect_YhgE_N"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03062">
        <property type="entry name" value="pip_yhgE_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03061">
        <property type="entry name" value="pip_yhgE_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="695"/>
            <end position="713"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="734"/>
            <end position="759"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="765"/>
            <end position="785"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="797"/>
            <end position="820"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="852"/>
            <end position="869"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="506"/>
            <end position="547"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="891" mass="98076" checksum="8BDF035202419D37" modified="2011-01-11" version="1">MRKIWQIYLTDWRNVFKVSTGTLLVIGIILLPSVYAWVNLKAMWDPYANTSGIKIAVTSQDQGAEVNGKKINIGDEVIHNLQNNKKLGWTFVNEAEARKGVLNGDYYASLLIPKDFSEKITSVLTENPQKPEIDYAVNEKINAVAPKITSSGATSLTNQISQNFIETASQAVLTKLKEAGVKLEEELPTIRNIENRVLELNNRLPDIDRLGKQALELEQNLPKIKAQGQKIIALKEKIPEINRAGDLVLKIDKNLPELDKVAAVILDIQKRLPDIQKAGDRIVELDQNFSKVESALATALEDTQTALKVINAARTALPEVQKIADTGKDFTTGILDFLDKNEGALDSIGTVVKEDLQLVQQIANEVSQITGIIRGVDFDPKAAQAAANRISGRLTTAVGVLDHISQLLNRVNGYLPSQPLDSLISRISGVEDRFRRLNSTVTSIGDAIQRGEKPAQNLLDDADRLAGEISSGIDSILDNYDTEYAPAIQKALDQIKSVARNSANVLTTAQEQLPNIEKLLNDAQAAAEFGQQELTRLQQDLPQYRQKLHEAATTIQGRMGKFTNAVNKAADFVKHDLPTVKSKIHQAANFVRNDLPKAEQQFIKMADLIENKFPEAEKAVHQVANFVRTDLPAAEDSIRQAADTIRKLKGENALGRAIALLKGDVKKESDFLGSPVSLKQERIYPIPNYGSAMSPFYTTLSIWVGAMLLVSMFRVDVDDPEGQYKSYQVYFGRLMTFSTIGIFQALSVSLGDLFLLGTYVDAKVAFVLSSMLISLVFTAMTYTLVSVFGNIGKGLAVILLVLQFSSSGGTFPIATSTAFFQTLNPFVPFTYAVSLLRETVGGMLPSTVTRDVVMLFVFIGICFLFGLVLKKPLSKHTKKMAERAKETKLIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGF6</accession>
    <name>E3EGF6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-336</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-336</name>
        <name evidence="1" type="ORF">PPSC2_01000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368827.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0197"/>
    <dbReference type="EnsemblBacteria" id="ADO54184">
        <property type="protein sequence ID" value="ADO54184"/>
        <property type="gene ID" value="PPSC2_01000"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01000"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.188"/>
    <dbReference type="eggNOG" id="COG1357">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052161_0_0_9"/>
    <dbReference type="OMA" id="VGEYMDH"/>
    <dbReference type="OrthoDB" id="1018137at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="430" mass="49123" checksum="3ECE5C9904DBE16F" modified="2011-01-11" version="1">MEKPIDELNPQQQVILNQAWFLIRRDWALKFKAKQGQRIQACVEEFRGYCRDIRQEQLQGRKGKIGYITYSMLRTTWLEERPTYLVEAANALWVLDPEPIRFEWDTSWTYSYWTDLQQKLRREVEKQHVSLPELEWEQVMLEAAVHIHVLVVNMMRLAIKKAMCLPEFQELDREETFEIRVGEYMDHTISVYKEDRRALEASEIRSWLEEQEEHAYSYQALEKIQLSDGDYSQLDFRYTAFRQIEMEHSRLHGCVLVGTMWEESQLDGIDLTYSLLHGADFSGCSMKGAILDAVMGNAGYGSDAALDWEPLGFAGVDFTRASLQGARFQDAQLREAVFQDASLQRAFLNGADLTDACFAGADVSGASFKGACLIGADFTGANVQGAMFTDAQRRGAIGLEWAILEASLSHKEPSASVQARDAAGKREWLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGF7</accession>
    <name>E3EGF7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-337</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-337</name>
        <name evidence="1" type="ORF">PPSC2_01005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368828.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0198"/>
    <dbReference type="EnsemblBacteria" id="ADO54185">
        <property type="protein sequence ID" value="ADO54185"/>
        <property type="gene ID" value="PPSC2_01005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.189"/>
    <dbReference type="eggNOG" id="ENOG50324GI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_126447_1_0_9"/>
    <dbReference type="OMA" id="LEWRAAI"/>
    <dbReference type="OrthoDB" id="2001365at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="19443" checksum="657735F2475355C3" modified="2011-01-11" version="1">MVDERVKHRVEPAALSPLQVEDILTGAQGQQDDPLFLAVYTDPRTVYPDFLEYPLPLVSDRMKALLEKYMPGLEWRAAILTDFQQARQEVYWVLRPPKMDRLSAQTEWYPNETLKRLILRQGEMESPVFRIVGLIEPHIYIHLAVAESLLRRSFTGIRVQRIEMEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGN5</accession>
    <name>E3EGN5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">PadR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pdc</name>
        <name evidence="1" type="ORF">PPSC2_03500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013308656.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16295"/>
    <dbReference type="EnsemblBacteria" id="ADO54674">
        <property type="protein sequence ID" value="ADO54674"/>
        <property type="gene ID" value="PPSC2_03500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.684"/>
    <dbReference type="eggNOG" id="COG3479">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_129251_0_0_9"/>
    <dbReference type="OMA" id="VCFQNDH"/>
    <dbReference type="OrthoDB" id="1751952at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14241">
        <property type="entry name" value="PAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012674">
        <property type="entry name" value="Calycin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008729">
        <property type="entry name" value="PA_de_COase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40087">
        <property type="entry name" value="PTHR40087"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05870">
        <property type="entry name" value="PA_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF011561">
        <property type="entry name" value="PAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50814">
        <property type="entry name" value="SSF50814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="163" mass="19252" checksum="D692E8EFE3DECACF" modified="2011-01-11" version="1">MDKFIGSHMIYTYENGWEYEIYIKNEDTIDYRIHSGMVGGRWVRDQKVNLVKLVENVYKVSWTEPTGTDVSLNFMPEEKRMHGIIFFPKWVHEHPEITVRYQNDFIPLMEESREKYETYPKYVVPEFADITFIENAGVNNEQLISQAPYAGMTDDIRAGKLQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGW2</accession>
    <name>E3EGW2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55196.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599535.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18840"/>
    <dbReference type="EnsemblBacteria" id="ADO55196">
        <property type="protein sequence ID" value="ADO55196"/>
        <property type="gene ID" value="PPSC2_05875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1203"/>
    <dbReference type="eggNOG" id="COG5498">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_336119_0_0_9"/>
    <dbReference type="OrthoDB" id="48542at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036116">
        <property type="entry name" value="FN3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49265">
        <property type="entry name" value="SSF49265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55196.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="764" mass="83673" checksum="72F98F121FECE6CD" modified="2015-05-27" version="2">MMKKWLTHRYTVVLSGLLGVAALTMIAWFIYTPSKSAELQTDKVAAASPVWKLGQRDDSSAEFKGVVGRDNIEISGAAASTESSAKGTFSALSEAESTTVPVLLSSGDIPPGLNASTNPELSLQYKLNQVPPNGMIFRVRILDAGKAVPQMAVFSNHQLSGIIQIAGVSGTGSTYNFKNNYELYIPKEQLQSGVNVLKLKTARCLYCSSAEDKNVWWTWDDLSLETLASPAAEPVHGKYILTGTNVNNKEFYYDQGAVKHLPYVLKWLGIAYSGNVMRVTCASNVGKACTDVDDYYQTLKQYNMQSSALYLYTGDIKLQKDGALPETAKQKLRDYVKKYGSYLQYYEVDNEPGLFNRSKAVDLAVAKWLNTEGKQLAPHLKTVAPGWAYWPTYSTKACKNQTGGTQKCGDPDGWERDPAQRKQLEEVTDLTNGHAYGESYNEEGGGSFVQNLKTFGGSSNGLAKKMLNTEFGTNDTHRDNPDYGASQPQAAAFDRIMRSQIGFADMFIQHAAFYKDYTLFKTGFDLQSHNPANTEIYPFGQGQDTRVKIMRRLSLAYATHGKPLTYTILNPEETKDKMVYVRAVDTSKLKPLSGSGATSNKLLVNLVNFESTTQTVRVRVTMPKAGLYTGERFGAGSTYSQAQRSISGLKASPALDFEEKLGPGESVQYILELKSTDQTTASAPTEVKAASIQDGAVKINWLQAEGISSYDVLRADRTDGAYQVIASQVEGSTYTDRTVKAGSHYVYKVRATGGTQVSQAAEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="78" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHK0</accession>
    <name>E3EHK0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9 10">tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase</fullName>
            <ecNumber evidence="9 10">2.8.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">tRNA-i(6)A37 methylthiotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">miaB</name>
        <name evidence="14" type="synonym">ymcB</name>
        <name evidence="14" type="ORF">PPSC2_10285</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>[sulfur carrier]-SH + AH2 + N(6)-dimethylallyladenosine(37) in tRNA + 2 S-adenosyl-L-methionine = 2-methylsulfanyl-N(6)-dimethylallyladenosine(37) in tRNA + 5'-deoxyadenosine + [sulfur carrier]-H + A + 2 H(+) + L-methionine + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:37067"/>
            <dbReference type="Rhea" id="RHEA-COMP:10375"/>
            <dbReference type="Rhea" id="RHEA-COMP:10376"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="ChEBI" id="CHEBI:74415"/>
            <dbReference type="ChEBI" id="CHEBI:74417"/>
            <dbReference type="EC" id="2.8.4.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="10">Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the methylthiotransferase family. MiaB subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.8.4.3" evidence="9 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370760.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22755"/>
    <dbReference type="EnsemblBacteria" id="ADO56153">
        <property type="protein sequence ID" value="ADO56153"/>
        <property type="gene ID" value="PPSC2_10285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2167"/>
    <dbReference type="eggNOG" id="COG0621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_018697_2_0_9"/>
    <dbReference type="OMA" id="CEHFHIP"/>
    <dbReference type="OrthoDB" id="397139at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035596">
        <property type="term" value="F:methylthiotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01864">
        <property type="entry name" value="tRNA_metthiotr_MiaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005839">
        <property type="entry name" value="Methylthiotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020612">
        <property type="entry name" value="Methylthiotransferase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013848">
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        <source>
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    <sequence length="517" mass="59158" checksum="E8E49FD0279B559E" modified="2011-01-11" version="1">MAKETKDYSQYFDFSDAKIISEDEHSKKIRIRGREINIMAEPNHRKEKQRGKEDVQVLYDNAVPDELKHIGEGKHYIVYTFGCQMNEHDSETIKGLLEQMGYQATEDRKEADIILLNTCAIRENAEDKVFGELGHLKHLKTEKPGLLLGVCGCMSQEENVVNRIMQKHGFVDMIFGTHNIHRLPQLVKEALFSKEMVVEVWSKEGDIIENLPKKREGMRAWVNIMYGCDKFCTYCIVPFTRGKERSRRPEDVIAEVRDLARQGFKEITLLGQNVNAYGKDLKDMNYRFGDLMDDMRKINIPRVRFTTSHPRDFDDHLVEVLGKGGNLVEHIHLPVQSGNTDILKKMNRKYTRERVLELAAKIKAAVPHVSLTTDIIVGFPGETDEQFEDTLSLVREVGYDFAYTFIYSPREGTPAASMEDNVPMSVKKERLRRLNIAVNQNSLRFNSRLRGEVVEVLVEGESKNDSKVLAGRTRSNKLVHFEGSKDLIGSFVQVKITEPMTFYIKGDLVQTPVAVNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI80</accession>
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                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
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        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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        </source>
    </reference>
    <comment type="subcellular location">
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    </evidence>
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        <source>
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    <sequence length="476" mass="51403" checksum="49FD7CF5E79ACFD4" modified="2011-01-11" version="1">MNITNKKWKLSLPHSYTLIFLIIITVAALTWVVPSGQFERHEVTVNGVTKTAIVSGTYHSVPKTGENGDLRQGIPQILSAPIEGIINAADVVSFVLIVGGSFGIILQTGAIDRALTALARRLKNKGILLIPIAMVIFSLGGSTFGMSEEIIPLYAIFIPLMFALGFDSMTAILILFLGTQIGYVGSTVNPFSVLIAQGIAGVEGNPQLWLRFIEWLVFTMISIAFTMWYAHRVKRNPEKSLVFQSDIINREQFIKESTGEDVVFTFRDKLIIGGFIVTLGAIVWGILVKGWYMTEIGALFFALGIFVGVVTKMSQKEIAENFVKGCGEFIYAAVIIGLARGILIIAEQGMIIDTVLNALASVLEGLPSYLFTTIMLLAHNIITFLVPSSSGEAALTMPVLAPLGDLVGINREAVVTAYQFGNGLTNLISPTGGVLLAGLAIARISFGQWLKVIFKLFPILWLIAAIFAAISAAVGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIH8</accession>
    <name>E3EIH8_PAEPS</name>
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        <submittedName>
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        </submittedName>
    </protein>
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    </gene>
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    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
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                <person name="Wang C."/>
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                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
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        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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        <property type="gene ID" value="PPSC2_06300"/>
    </dbReference>
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    <dbReference type="OMA" id="KVMDTDR"/>
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        <property type="component" value="Chromosome"/>
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        <property type="entry name" value="LolA/LolB/LppX"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168947" evidence="2">
        <location>
            <begin position="27"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
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        </location>
    </feature>
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            <begin position="208"/>
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        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
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            <begin position="283"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
    <sequence length="425" mass="45506" checksum="7B90753B2DACE554" modified="2011-01-11" version="1">MRRISWMLAMVMCVTLLLAGCGKKSADDVVKDLSDVVSDLNSYHGTALMTLHTGDTPQEYKVDISYRKPSYYRIAMTNEKKDVTQIVLRNDEGVFVLTPSLNKSFRFKSDWPNNQGQVYLYETLVRSIIGDASRQLATDDKSYVFDVAANYNSHALVRQKIWLSKNNYAPTQVQVSDANAKVVVDLKFDQFAFDTKFDKDSFDMERNMASGKTSAGSEGSPSSGAVDSSGLPDSSGTLEGTTGVTSSGSGQEQGTVGNDVQQPSGEAKSDGAVTGDTSKPEAAANAEAQQQTPSTADGATGTSAGTDAAEAVLGEFGLIEPSYTPAGVQIKDTPELEDNGTHAVMLRYSGTYNYTIVEARPKDRAVALSAGELVDIGGSFAVLTGSEQQTMTWMNDGIEFRITSADLPVSEMIQIAASIQDQSGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIS9</accession>
    <name>E3EIS9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">purR5</name>
        <name evidence="6" type="ORF">PPSC2_09335</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370565.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21805"/>
    <dbReference type="EnsemblBacteria" id="ADO55948">
        <property type="protein sequence ID" value="ADO55948"/>
        <property type="gene ID" value="PPSC2_09335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1966"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_2_9"/>
    <dbReference type="OMA" id="FPNIRHQ"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="5"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="355" mass="40041" checksum="BCC2360129608C16" modified="2011-01-11" version="1">MRGKVTLQEIADAAGVSKFAVSRALSGKPGVSEETRALLVKLAAQMGYFRSHPKMTGVEPRDTDAREWSGTVLVLFPNIRHQNRESKYWGPVFEGISERLNRRGLDMITLTEPSTDDMFSLLNPEAIKGIITVGTISTTLLLNIYRMGIPVVMVDHWDSAFLSDAVFTDNRTCMNELMKDLLCKGYDHFQFVGHIDDAHSFYERWEAFRSTLEMSGVELRQNKALIYGGAQALAEEMDKLPEDELPEVFVCANDVTASQVVEVLKGKGIDVPRRCGVTGFDDTNDQMPIYATVRVDKELLGMRAVDQLLWRIMNPNSPVEKKLLHADLLVREVHAPRLSRENDDRDRPFSTIKYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIY8</accession>
    <name>E3EIY8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">TrxB3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">trxB3</name>
        <name evidence="1" type="ORF">PPSC2_10360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370776.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22830"/>
    <dbReference type="EnsemblBacteria" id="ADO56169">
        <property type="protein sequence ID" value="ADO56169"/>
        <property type="gene ID" value="PPSC2_10360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2182"/>
    <dbReference type="eggNOG" id="COG0492">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067342_0_0_9"/>
    <dbReference type="OMA" id="KMGQPNR"/>
    <dbReference type="OrthoDB" id="324612at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023856">
        <property type="entry name" value="Bacillithiol_biosynth_YpdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04018">
        <property type="entry name" value="Bthiol_YpdA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="323" mass="36201" checksum="288FE58A5B4FA19E" modified="2011-01-11" version="1">MHDVIIIGGGPCGLSAAIECSRRGLRTIIIEKSNIVHSIFLYPTNMQFFSTAELLEIGDVPFSTPNDKPFRHEALAYYRKVASHYNLDIQHYEEAQSIQRQEDGTFTVHTLSKREISKSYSTRYVVVATGYFDHPNYLGIPGEQLDKVTHYFSEAHPYTGTRVAVIGGSNSAVDAAMELVRVGATIDMVYRRNELSPYIKPWVRPLFDSMVQKGKITLHLGARITEIHPDHVIVSPMNTEAFQLENDFVLALTGFHPERKLLESVGVHMAEDLDKPEFNPTTMETNIPGIYVAGVIASGSNANEVFIETGRWHGRQIAEHIQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ73</accession>
    <name>E3EJ73_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aminoglycoside adenylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">aadK</name>
        <name evidence="1" type="ORF">PPSC2_11220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370965.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56360">
        <property type="protein sequence ID" value="ADO56360"/>
        <property type="gene ID" value="PPSC2_11220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2375"/>
    <dbReference type="eggNOG" id="ENOG502Z7S1">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076578_1_0_9"/>
    <dbReference type="OMA" id="VMGNLFR"/>
    <dbReference type="OrthoDB" id="1182556at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007530">
        <property type="entry name" value="Aminoglycoside_adenylylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04439">
        <property type="entry name" value="Adenyl_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000812">
        <property type="entry name" value="AAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="33876" checksum="F0FEF5D603EB4384" modified="2011-01-11" version="1">MRSEQEMLHTILQFAQEDERVRAVIMNGSRANPHAPRDIFQDYDIVFLVSSMDSFIQERGWIHHFGELIIMQTPDEHAEPTVTSRDRFAFLMLFTDGNRIDLTLCPVANIDNWPRDSLSVLLLDKDGLVKPFPPPNLQDYKTVPPTAQTYADSCNEFWWVSTYVAKGLWRHELPYAKFMLDRPVRDALHLMLEWHMGIQSDFTADPGKQGKYLEKHLEPDHWTAYIQTFADADYEHMWQSLFIMGNLFREVAQKVANHYGYKYPIQDDQRVTNYLYHIKALPTDATDIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJD3</accession>
    <name>E3EJD3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">MTH_1382</name>
        <name evidence="8" type="ORF">PPSC2_11515</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the auxin efflux carrier (TC 2.A.69) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371025.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23880"/>
    <dbReference type="EnsemblBacteria" id="ADO56420">
        <property type="protein sequence ID" value="ADO56420"/>
        <property type="gene ID" value="PPSC2_11515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2435"/>
    <dbReference type="eggNOG" id="COG0679">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_056175_4_0_9"/>
    <dbReference type="OMA" id="SPFRLWI"/>
    <dbReference type="OrthoDB" id="2033473at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
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    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
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        <property type="project" value="InterPro"/>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="97"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="128"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="191"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="225"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="253"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="286"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="308" mass="32937" checksum="5C3EB57B04D51A1B" modified="2011-01-11" version="1">MVQIVLSTLLSVIVPLSIPVIVGFLLGKFMKLETKPLSTLYLYFLSPAMILDTLLKAQLSWHDVALTAAFSLLNLLLLWGIAQLAGKIFRLSPPETAGLTLISTLTNSANYGLPLILLAFGQLGLDKASVYVVIQMIMVNTIGVYFAARSEFSVQSAVKSVFSLPAIYAALLALGLRALDWHLPSGIQSGVSMIAAAYSPVVLAILGTQMAYVKIFRLEPSIKKASYAGLIIRLLLSPLAACLAMLILGISGLLFSVLFILASMPVAVNAVILAEKFNASPKLVSTCILWSTLASFLILPILIMLVAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJZ3</accession>
    <name>E3EJZ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO60012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386426.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO60012">
        <property type="protein sequence ID" value="ADO60012"/>
        <property type="gene ID" value="PPSC2_28125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5962"/>
    <dbReference type="HOGENOM" id="CLU_2918392_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO60012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="6966" checksum="48DDFD49BC72341E" modified="2011-01-11" version="1">MDGESPINIINEEDKVRIVDGCFEGKVGTVRVVRTDKHYPYLVTLPDHELLPFLEGQIKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK86</accession>
    <name>E3EK86_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PPSC2_27990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
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    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0018"/>
    <dbReference type="EnsemblBacteria" id="ADO59413">
        <property type="protein sequence ID" value="ADO59413"/>
        <property type="gene ID" value="PPSC2_27990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5933"/>
    <dbReference type="HOGENOM" id="CLU_2845732_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="8008" checksum="58674ACC3E749984" modified="2011-01-11" version="1">MMITENFLESEELVEKTKEKSLHRKRRESKMRDKQGKEDFKPDKNKNRSARKMKKLWDDDEDYSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK92</accession>
    <name>E3EK92_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27960</name>
    </gene>
    <organism evidence="2 3">
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        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385833.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0025"/>
    <dbReference type="EnsemblBacteria" id="ADO59419">
        <property type="protein sequence ID" value="ADO59419"/>
        <property type="gene ID" value="PPSC2_27960"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27960"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5925"/>
    <dbReference type="HOGENOM" id="CLU_1260422_0_0_9"/>
    <dbReference type="OrthoDB" id="2093490at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="219" mass="25377" checksum="8A10048598C07018" modified="2011-01-11" version="1">MTIDKVIEAGKSIVKPDLPWYSEFGVVSWSIIICSAVLGILFCIWSCKTEKKVSDCFCIEDSNWRENWSILFICLSIVTIVFNILSSASKETDIYDAKVESWRQTVAKPFIESLPKEKKEIVYIKIDPELSEKVEGFSFWGTGYTTSSEVARTPLVISYKDQGIRTKTNWYETYMELTNDKKPYIEYQRVTKDLGHDIKAGDYNTKIYLPESYEFQEIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL46</accession>
    <name>E3EL46_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386022.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0215"/>
    <dbReference type="EnsemblBacteria" id="ADO59608">
        <property type="protein sequence ID" value="ADO59608"/>
        <property type="gene ID" value="PPSC2_27100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5731"/>
    <dbReference type="HOGENOM" id="CLU_959235_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="189"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="220"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="255"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="33284" checksum="17F952223A98954A" modified="2011-01-11" version="1">MGKSEQLDDYSVFDYVWYSFLLGLCFFMPAFLIFVMDTVMDVPATENHIVMDFLQLSYHIVIGFQFESIVRKLSLFWVVFVGIGVMLKLFLSVRLIDKTRPFMGGILITFATSFGIFVGVALIAHWSNSIENHLYSFFINNFKDIFDFDYPKEMNERSYLIIFENLTVFNVVHNGICAVLIAGFGLTKIYRFMKLIIYSVLFPILYASRFEKGSVLWGKFILEGMKLIVDTIVGMGLLIYFILTNMNDGSLLGNLLIGIGFLAFVSMVMVFLKKNTPKLLQNNNRRYVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL65</accession>
    <name>E3EL65_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386041.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0234"/>
    <dbReference type="EnsemblBacteria" id="ADO59627">
        <property type="protein sequence ID" value="ADO59627"/>
        <property type="gene ID" value="PPSC2_27005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5710"/>
    <dbReference type="HOGENOM" id="CLU_2420749_0_0_9"/>
    <dbReference type="OMA" id="ANIHGSH"/>
    <dbReference type="OrthoDB" id="1912569at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="82" mass="9266" checksum="D66F5C17380FBD5B" modified="2011-01-11" version="1">MDLHFKGVNDRTGRVEWIERDLARSTSPEGLIMEEWQVCVGRDLTKDELSTIAWLAGLEQSTIDNVMSLIKSANIHGSHNRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL86</accession>
    <name>E3EL86_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59918.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886242.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0529"/>
    <dbReference type="EnsemblBacteria" id="ADO59918">
        <property type="protein sequence ID" value="ADO59918"/>
        <property type="gene ID" value="PPSC2_28575"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28575"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6064"/>
    <dbReference type="HOGENOM" id="CLU_1342179_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59918.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="204" mass="24236" checksum="749E21017DDCFBF8" modified="2015-05-27" version="2">MSYSSLWAMNANLDGVEIREFQNPWLLSPIAWDILYEKYLPNEIDGEYGKKSFRLASRLDHDLFNRFSDIIYNCDNQEDRVIWEFSKQQIFFTKDKNFIAESLQQFIANNPVIAKDVSDHRFKEVAYEVLNLNQEKHPYFVFKNSSIINDVVCWFESFNAQSEEYTPRSLKHIDKIVADFVLIQDRSILGFKNNVEFCKELFNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCU6</accession>
    <name>A0A0D5ZCU6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886253.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44394">
        <property type="protein sequence ID" value="AKA44394"/>
        <property type="gene ID" value="PPSC2_28230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5986"/>
    <dbReference type="HOGENOM" id="CLU_1957417_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="128" mass="14971" checksum="D74DF5AAFA931954" modified="2015-05-27" version="1">MYITTNIDFEEAVTKLNKFIGYPVTEIFCDSNSIEDGGHFRGAMILRGSYQERVIYLDFYKESEIKYEKGLYLHDQRAKETFQIESIKEKGYTLIDVRGELFEVSDLSAFRIASKIEREQFQLVTNKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCV9</accession>
    <name>A0A0D5ZCV9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886193.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44362">
        <property type="protein sequence ID" value="AKA44362"/>
        <property type="gene ID" value="PPSC2_26770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5659"/>
    <dbReference type="HOGENOM" id="CLU_2956318_0_0_9"/>
    <dbReference type="OrthoDB" id="1213601at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6773" checksum="0EE61428CB8BC01F" modified="2015-05-27" version="1">MLTTVFVVIIVAVIVLFVASNVRIVPQSENYVIERLGAYKETWNTGLKFNDVRREFSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4E6</accession>
    <name>E3E4E6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lplB7</name>
        <name evidence="7" type="ORF">PPSC2_12740</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56686.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886110.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00140"/>
    <dbReference type="EnsemblBacteria" id="ADO56686">
        <property type="protein sequence ID" value="ADO56686"/>
        <property type="gene ID" value="PPSC2_12740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2709"/>
    <dbReference type="eggNOG" id="COG4209">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_1_9"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="242"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="294"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="100"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO56686.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="37476" checksum="68D7AE940115D7FE" modified="2015-05-27" version="2">MKISYVKKGNVMVNTKISELDHSTIKPNRKIWNQIKRDYELYLFLLPIIIIYLVFKYYPMYGIQIAFKDFSPSRGIWESEWVGFKHFIDFFDSYNFWTIMTNTLTLSVLSLVFSFPAPIIIAIMLNQMLAKRYKKIVQTVIYAPHFISTVVLVGMLNVFLSPNSGIVNHIITWFGGDPIMFLADEGWFRPLYILSGVWQETGFATIIYLAALAGVNPELHEAAIMDGASKWKRVMHVDIPNILPTIVILLILALGNIMGIGFEKAFLMQNDLNYATSNIIPTYVYEIGIQKAQYSFSTAIGLFNSVVNIILIVTVNRIAKKLTETSLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4G1</accession>
    <name>E3E4G1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_12800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371305.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56701">
        <property type="protein sequence ID" value="ADO56701"/>
        <property type="gene ID" value="PPSC2_12800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2725"/>
    <dbReference type="eggNOG" id="COG1476">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_189668_0_0_9"/>
    <dbReference type="OMA" id="KLEARAC"/>
    <dbReference type="OrthoDB" id="1933795at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="77" mass="8863" checksum="A7AB3F589ABD0FB5" modified="2011-01-11" version="1">MKFELGRCLLSERLMESGKSAEWLAKDLLFKPERVYDFIENKRVMPLKIAISIADSIGCDVRTLYELIPNDNEVKGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4R5</accession>
    <name>E3E4R5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pantothenate synthetase</fullName>
            <shortName evidence="5">PS</shortName>
            <ecNumber evidence="5">6.3.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Pantoate--beta-alanine ligase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Pantoate-activating enzyme</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">panC</name>
        <name evidence="6" type="ORF">PPSC2_14435</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>(R)-pantoate + ATP + beta-alanine = (R)-pantothenate + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10912"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15980"/>
            <dbReference type="ChEBI" id="CHEBI:29032"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57966"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.2.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Cofactor biosynthesis; (R)-pantothenate biosynthesis; (R)-pantothenate from (R)-pantoate and beta-alanine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="5">The reaction proceeds by a bi uni uni bi ping pong mechanism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the pantothenate synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.1" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371642.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02085"/>
    <dbReference type="EnsemblBacteria" id="ADO57043">
        <property type="protein sequence ID" value="ADO57043"/>
        <property type="gene ID" value="PPSC2_14435"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14435"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3081"/>
    <dbReference type="eggNOG" id="COG0414">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047148_0_0_9"/>
    <dbReference type="OMA" id="SRNKYLC"/>
    <dbReference type="OrthoDB" id="1661843at2"/>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004592">
        <property type="term" value="F:pantoate-beta-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00560">
        <property type="entry name" value="PanC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00158">
        <property type="entry name" value="PanC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003721">
        <property type="entry name" value="Pantoate_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042176">
        <property type="entry name" value="Pantoate_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21299:SF1">
        <property type="entry name" value="PTHR21299:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02569">
        <property type="entry name" value="Pantoate_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00125">
        <property type="entry name" value="cyt_tran_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00018">
        <property type="entry name" value="panC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 5" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="162"/>
            <end position="165"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>(R)-pantoate</name>
            <dbReference type="ChEBI" id="CHEBI:15980"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="199"/>
            <end position="202"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="34633" checksum="2C9D61343492393E" modified="2011-01-11" version="1">MIIVREVAQLRKVIAERRQLGANGAKTLHDSASLLQHKVGFVPTMGYLHEGHASLMQKAREMADTVVLSIFVNPIQFGPTEDLDSYPRDEARDLEVARREGVDIVFMPTVAEMYPQPTQTKIHVSALTDRLCGASRPGHFDGVTTVVAKLFNMVGPDLAFFGMKDAQQVAVLQQMVADLNMNVTLIPCPIVREADGLALSSRNVYLSAEQREQALVLSQSLRKVQEVSEDIVQNTITIEQLHQMVESTIASSPLADIDYIEILTFPGLEPLRPEQRLCDVQEDVIVALAVKFGNTRLIDNIRIQKVEVLSHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4T9</accession>
    <name>E3E4T9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Tryptophan synthase alpha chain</fullName>
            <ecNumber evidence="7">4.2.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">trpA</name>
        <name evidence="9" type="ORF">PPSC2_14550</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + L-serine = D-glyceraldehyde 3-phosphate + H2O + L-tryptophan</text>
            <dbReference type="Rhea" id="RHEA:10532"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
            <dbReference type="ChEBI" id="CHEBI:58866"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.2.1.20"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 5/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Tetramer of two alpha and two beta chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7 8">Belongs to the TrpA family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.20" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371664.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02200"/>
    <dbReference type="EnsemblBacteria" id="ADO57067">
        <property type="protein sequence ID" value="ADO57067"/>
        <property type="gene ID" value="PPSC2_14550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3105"/>
    <dbReference type="eggNOG" id="COG0159">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016734_0_0_9"/>
    <dbReference type="OMA" id="LVMTYWN"/>
    <dbReference type="OrthoDB" id="912786at2"/>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004834">
        <property type="term" value="F:tryptophan synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04724">
        <property type="entry name" value="Tryptophan_synthase_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00131">
        <property type="entry name" value="Trp_synth_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018204">
        <property type="entry name" value="Trp_synthase_alpha_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002028">
        <property type="entry name" value="Trp_synthase_suA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43406">
        <property type="entry name" value="PTHR43406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00290">
        <property type="entry name" value="Trp_syntA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00262">
        <property type="entry name" value="trpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00167">
        <property type="entry name" value="TRP_SYNTHASE_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="268" mass="29233" checksum="81372D6716DF8AA8" modified="2011-01-11" version="1">MNLIDQAFERLKNEGKTALIPFLTVGDPDVDTTIEIIRQLESAGADILELGVPYSDPLADGPVIQRASERALKRQISIRTCMETASLARAAGSNLPFILFTYYNPVLQMGMDAFFAGLQEHGISGLIIPDLPLEEAEELGGRAAEVGVHLIPLVAPTSEQRIERIARQARGFVYCVSSLGVTGERASFFEGIEGFIAQVKRHTSVPVAIGFGISNRKQIVRFSDICDGVVVGSAIVRQVEEAIPLLEDSARREEGLLQIRDFVAQLKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E502</accession>
    <name>E3E502_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Putative membrane protein insertion efficiency factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ytjA</name>
        <name evidence="3" type="ORF">PPSC2_15220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Could be involved in insertion of integral membrane proteins into the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0161 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371800.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02840"/>
    <dbReference type="EnsemblBacteria" id="ADO57210">
        <property type="protein sequence ID" value="ADO57210"/>
        <property type="gene ID" value="PPSC2_15220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3249"/>
    <dbReference type="eggNOG" id="COG0759">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_144811_2_2_9"/>
    <dbReference type="OMA" id="QPTCSHY"/>
    <dbReference type="OrthoDB" id="1912220at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00386">
        <property type="entry name" value="UPF0161_YidD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002696">
        <property type="entry name" value="Membr_insert_effic_factor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33383">
        <property type="entry name" value="PTHR33383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01809">
        <property type="entry name" value="YidD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01234">
        <property type="entry name" value="Haemolytic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00278">
        <property type="entry name" value="TIGR00278"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="72"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="96" mass="10577" checksum="E009A975325364C4" modified="2011-01-11" version="1">MKITTRRVVQAPIQFYRAYISPLKPATCRFYPTCSAYALEAVEVHGALKGSWLAAKRIAKCHPFHPGGVDLVPPAKKGVDKSDKDRLATHTEKGLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E504</accession>
    <name>E3E504_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA-directed RNA polymerase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpoB1</name>
        <name evidence="4" type="ORF">PPSC2_15230</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371802.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02850"/>
    <dbReference type="EnsemblBacteria" id="ADO57212">
        <property type="protein sequence ID" value="ADO57212"/>
        <property type="gene ID" value="PPSC2_15230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3251"/>
    <dbReference type="eggNOG" id="COG3291">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014753_0_0_9"/>
    <dbReference type="OMA" id="AYHLNAL"/>
    <dbReference type="OrthoDB" id="585866at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035986">
        <property type="entry name" value="PKD_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49299">
        <property type="entry name" value="SSF49299"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168621" evidence="2">
        <location>
            <begin position="28"/>
            <end position="740"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="3">
        <location>
            <begin position="145"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="40"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="740" mass="80006" checksum="213B70C89BAF7251" modified="2011-01-11" version="1">MNFKKWTMLTVLAVAQVAAVAPVGAEAASTTVQSTDSVSAQQAQTNVADSGVQNSIGDQDGTSTQNNTVTPNNTGVSNDPLTGLPTDTINGSNVTNDVYGGDGTITNPGGAPTSMNANQLILYLNSAKMEQNGQVYTATQPMTVKDGVSYVAIRSLVSRVGLQFSYDTATKETVITQGTNVLRFKTDSKVYTVNGEARQMKGPAFQQKNVFMVPLTSITQALNIPYTVNNTTKQVIMDLNQKPKASFTVQQKDIYAGETQVTYLTKESSPTGLPIVNQRWEGKQDVFQEPGTYVVTYSVLDSAGNWSDPYSVTITVRPPNQPPVALFTTDKKEYKMGEKITITDLSTDDENAITKRDWENKKLAFFQPGDVTITLTVTDKHGATGTKSETIKITNELLYNEDDFNKIFTPYGDKYSVDGSQVPAMATIPVTSTSSPRLLIRANSPERVFQDGIVYQETGSGSTRILVHHVNETGRDVKMYVIATNNNITPTNINVENSGFAGPSEFATAAGKVSIQRYFQSMLDGSKHSSTVLNPGESRVILQDLNAQKIKQKQVISLLSDLYTDQPIQYTVVVLDANVDPLTALPTLAKLPKDGIHNRGTYANSDISLNYTEEVGKTAQRIVLGDNKVDPNLIGTDGLDGSSASNAGNFGVVYKVKLDHVAPYSLITFNPRGGEYSGYAMVNNQVVGIPTNGSVWAPNEMSVLYRTGHIEESVEMYFTAAAGSNLPVSVVVMPLPAIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E516</accession>
    <name>E3E516_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar phosphate isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">inoDHR</name>
        <name evidence="2" type="ORF">PPSC2_15280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371814.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02900"/>
    <dbReference type="EnsemblBacteria" id="ADO57224">
        <property type="protein sequence ID" value="ADO57224"/>
        <property type="gene ID" value="PPSC2_15280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3263"/>
    <dbReference type="eggNOG" id="COG1082">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059523_1_0_9"/>
    <dbReference type="OMA" id="LWHVKDM"/>
    <dbReference type="OrthoDB" id="1194699at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="23"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="29448" checksum="15584B91487CA491" modified="2011-01-11" version="1">MTKVGLQLYTVREELEQDFEGTLRKVAELGYKGVEFHSFFGRSAKDVRALLDELNLEVVGTHIQYSRLLHHLDEEIAYHIELGNKYLIVPYLTEEEREWDDLFVNLNRIGEKVKEHGLILAYHNHDFELTEKINDRPVFDALYDAVPDDLLQVEMDTCWVYYGGYDPVEYIGRYRGRLPIIHLKDMARDEQQKAVTVELGQGEVQLQTITDAAIEAGVDWVVVEQDFSSNPSIESIETSMKWLQQYAAQGGNIHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E539</accession>
    <name>E3E539_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DegV3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">degV3</name>
        <name evidence="2" type="ORF">PPSC2_15385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57247.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03035"/>
    <dbReference type="EnsemblBacteria" id="ADO57247">
        <property type="protein sequence ID" value="ADO57247"/>
        <property type="gene ID" value="PPSC2_15385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3287"/>
    <dbReference type="eggNOG" id="COG1307">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048251_0_1_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003797">
        <property type="entry name" value="DegV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043168">
        <property type="entry name" value="DegV_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02645">
        <property type="entry name" value="DegV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00762">
        <property type="entry name" value="DegV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51482">
        <property type="entry name" value="DEGV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57247.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="289" mass="31347" checksum="F1E5772A2007871F" modified="2015-05-27" version="2">MMRTIILTDSTADIPQEIADRLGIVIVPLTVMFGSTAYLDGIEMSAAQFYSELVRADELPTTSQPSPARFLETYTELLEQYPESQIISIHLSSGVSGTYQSALLGKSMLEKHEDRVTVMDSKSASYGYGMLVVYAAELAAAGQSPTEIIQGVERLGERRCLYFLVDTLEYLQKGGRIGKAAAMVGTLLNIKPILSIDKEGIIYSADKARGNKKATARIIELLERDLKGQKINIAVGHTADRSAAEAFVAQLAEHFELGDQIYTELGAVIGTHVGPGTIGIFAWPAGDER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E552</accession>
    <name>E3E552_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10">DNA-directed RNA polymerase subunit omega</fullName>
            <shortName evidence="10">RNAP omega subunit</shortName>
            <ecNumber evidence="2 10">2.7.7.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">RNA polymerase omega subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9 10">Transcriptase subunit omega</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">rpoZ</name>
        <name evidence="11" type="synonym">yloH</name>
        <name evidence="11" type="ORF">PPSC2_15455</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 10">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="10">The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the RNA polymerase subunit omega family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2 10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371850.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03105"/>
    <dbReference type="EnsemblBacteria" id="ADO57260">
        <property type="protein sequence ID" value="ADO57260"/>
        <property type="gene ID" value="PPSC2_15455"/>
    </dbReference>
    <dbReference type="GeneID" id="66576889"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3302"/>
    <dbReference type="eggNOG" id="COG1758">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_125406_6_0_9"/>
    <dbReference type="OMA" id="KYTIVTV"/>
    <dbReference type="OrthoDB" id="1864134at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00366">
        <property type="entry name" value="RNApol_bact_RpoZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003716">
        <property type="entry name" value="DNA-dir_RNA_pol_omega"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006110">
        <property type="entry name" value="Pol_omega/Rpo6/RPB6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036161">
        <property type="entry name" value="RPB6/omega-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34476">
        <property type="entry name" value="PTHR34476"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01192">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01409">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63562">
        <property type="entry name" value="SSF63562"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00690">
        <property type="entry name" value="rpoZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10 11" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="67" mass="7607" checksum="2E15A9A5C602BF8F" modified="2011-01-11" version="1">MLYPSIDEMMKKVDSKYSLVVAASRRARQLREGEKTSLKSPKSHKQVGVALEEIYADHLLLESGEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E558</accession>
    <name>E3E558_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372004.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3462"/>
    <dbReference type="EnsemblBacteria" id="ADO57418">
        <property type="protein sequence ID" value="ADO57418"/>
        <property type="gene ID" value="PPSC2_16205"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16205"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3461"/>
    <dbReference type="eggNOG" id="ENOG5033RKY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1260417_0_0_9"/>
    <dbReference type="OMA" id="AILPRYW"/>
    <dbReference type="OrthoDB" id="1551942at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="146"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="200"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="215" mass="24382" checksum="D3F3DD776F98E34A" modified="2011-01-11" version="1">MLALSQGKIRLTFPITPAEIQITGGNEVETFTVITGQERTGKPVSKVKRVSFSAILPRYWEEIWETDSKQTVTYKTPEVTWKLLEQWKGKPVVLNFENLFSQTMLLEGMDQTYKDGQGNLHGNYSFVEYKPVKIVSYSNSKQVLKPGTVITKPSKSRPNTTGKKDKKNEKKKDDKKKKAKDKSKKAKEDPNARGAFDYTSSKKRISDKVSKAKGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3E561</accession>
    <name>E3E561_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_16220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372007.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3465"/>
    <dbReference type="EnsemblBacteria" id="ADO57421">
        <property type="protein sequence ID" value="ADO57421"/>
        <property type="gene ID" value="PPSC2_16220"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16220"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3464"/>
    <dbReference type="eggNOG" id="ENOG5033JEF">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1764192_0_0_9"/>
    <dbReference type="OrthoDB" id="1601962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018989">
        <property type="entry name" value="DUF2001"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038628">
        <property type="entry name" value="XkdM-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09393">
        <property type="entry name" value="DUF2001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="148" mass="16988" checksum="E913C8597B9AB5D9" modified="2011-01-11" version="1">MERELIGRNLSLQDDNGEDIHTVKEVEVKLTTETLDIVRARRMTKTKQLTGYEIPVKIVMSKLESRLRYRLLEDFKAGKTMFLARITGGLEDRITGNTEKVLITGVHIHGEMDILIAKIDDNNGIDITLEGTATDFDFVEKFPDYMWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5R7</accession>
    <name>E3E5R7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arsR9</name>
        <name evidence="2" type="ORF">PPSC2_18615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007431533.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3994"/>
    <dbReference type="EnsemblBacteria" id="ADO57944">
        <property type="protein sequence ID" value="ADO57944"/>
        <property type="gene ID" value="PPSC2_18615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3989"/>
    <dbReference type="eggNOG" id="COG0640">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_097806_6_1_9"/>
    <dbReference type="OMA" id="MGNEMQQ"/>
    <dbReference type="OrthoDB" id="1772343at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="12175" checksum="851E875EFAC09D64" modified="2011-01-11" version="1">MEGDLQKFKADFFKALAHPLRIRILEVLSEGERNVNELQTALGSEGSAVSQQLAVLRAKNLVNSFKEGTTVVYSLRDPLLTELLAVARRIFDNHLVEAISLLEGIRNEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5U7</accession>
    <name>E3E5U7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arginase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arginase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372738.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06945"/>
    <dbReference type="EnsemblBacteria" id="ADO58166">
        <property type="protein sequence ID" value="ADO58166"/>
        <property type="gene ID" value="PPSC2_19725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4205"/>
    <dbReference type="eggNOG" id="COG0010">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_085654_1_0_9"/>
    <dbReference type="OMA" id="WQGGNNP"/>
    <dbReference type="OrthoDB" id="1598732at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016813">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43782">
        <property type="entry name" value="PTHR43782"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="303" mass="33599" checksum="CB3DC33226D55BD4" modified="2011-01-11" version="1">MTRTIRLLMPQWQGGNNPNYSFGAELLAWLAPDNDQPLIHVPVQAYDGTPLDNENGMNGRKQLLEQLEAAQHIIDAHKPDRIVMFGGDCLVEQAPFAYLNERYGGELGLIWIDAHSDLVRYVGYDNGHTLPLGNLLGEGDEEFAKHVKVPLKPENVFIAGLAAPTEEETKAFSETFQKLGVTTIETDAEVIQRLGIRTAGTKELTISTESIKEWITESGIKHLAIHLDLDVLDPKSFRSLLFANPEAPYNLSPAGTMQIPQLLHLIKELSEETDVVGLGITEHMPWDAINLKNLLGEIPILNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5V9</accession>
    <name>E3E5V9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GCN5 family acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_19780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372750.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07000"/>
    <dbReference type="EnsemblBacteria" id="ADO58178">
        <property type="protein sequence ID" value="ADO58178"/>
        <property type="gene ID" value="PPSC2_19780"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19780"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4216"/>
    <dbReference type="eggNOG" id="COG0456">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_34_1_9"/>
    <dbReference type="OMA" id="IAGFDGW"/>
    <dbReference type="OrthoDB" id="1390922at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="145" mass="16086" checksum="7DE71BD5F6DD2924" modified="2011-01-11" version="1">MASVTDGYTFRTMQADDYDQAIALWNGLDGLGLSEADSPERIARFLQRNEGLSFVCEHAGNIIGTILAGHDSRRGFLYHLGVATEHRGHGIAPRLVDKALSSLLKEGIDKCHLFVMEHNIGGQRFWSANGWEKRDGILLYSRDLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5X8</accession>
    <name>E3E5X8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">rRNA (Guanine-N1)-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_19865</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372769.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4247"/>
    <dbReference type="EnsemblBacteria" id="ADO58197">
        <property type="protein sequence ID" value="ADO58197"/>
        <property type="gene ID" value="PPSC2_19865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4234"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050931_2_0_9"/>
    <dbReference type="OMA" id="MTPHGWR"/>
    <dbReference type="OrthoDB" id="1865374at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016718">
        <property type="entry name" value="rRNA_m1G-MeTrfase_A_prd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF018249">
        <property type="entry name" value="MyrA_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="3">
        <location>
            <begin position="110"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="2">
        <location>
            <begin position="116"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="23"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="26"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR018249-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR018249-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="295" mass="33756" checksum="DB8DAA71605705F5" modified="2011-01-11" version="1">MSKWNKHEMKASLIGKHQHLFSCPVCSQPMRMVEGKSLLCTNQHCYDLSKHGYLHLSARSHKTKYDKQLFNSRRMMCNNGFFDPLNEAISCTMMKLMKPLFDQKSHLYLLDAGCGEGSHSTHIQDKLTGKGITELTSVGMDLSKEGIVAAAKAYPDALWCVADLAHCPFANQQFDSILNILSPSNYAEFKRILSEDGCILKVIPEQYYLQELRCLYEQKKPAYSNDNIVSRFKDQFNLLSAERVTYRFMLNADLVEPLLHMTPLSWRATKADWQRMQAIDLPYVTVDLLILCGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3E607</accession>
    <name>E3E607_PAEPS</name>
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        <recommendedName>
            <fullName evidence="1">DUF4340 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="ADO58226">
        <property type="protein sequence ID" value="ADO58226"/>
        <property type="gene ID" value="PPSC2_20005"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20005"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4263"/>
    <dbReference type="eggNOG" id="ENOG502ZATI">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_893839_0_0_9"/>
    <dbReference type="OMA" id="KWIPTVL"/>
    <dbReference type="OrthoDB" id="852763at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025641">
        <property type="entry name" value="DUF4340"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14238">
        <property type="entry name" value="DUF4340"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4340" evidence="1">
        <location>
            <begin position="67"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="33884" checksum="D4E5CC0544DBF4AB" modified="2011-01-11" version="1">MRKWIPTVLLLVVLGAGIIYAKSQNFFREQAPAARQLIQLTQGDITSFAITGKDGKSVELNQRDGKWSMSKPRSYPLNQYTIDNWLAAIQNVKLGDVVESSPTDVAKYGISATNDQIEIKTKKGDVRTFAFGETLPSGDAVYVLSDQKEIASVPIDTLSGLLLGADDFTDTTPFDWDDTKLSGIEWEGQNASWMLRSSGSSGTGDSASASWTLNGKSVAGDTATSLSQQIKNLASSQALRKASELNKPVHRFTLSISLGKEDSQLVYQGWTLNDDPDTVWVVPPQSNWAYGLSASDVNRAEQSGHDQAKASQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E624</accession>
    <name>E3E624_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Dienelactone hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_12835</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371313.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2742"/>
    <dbReference type="EnsemblBacteria" id="ADO56709">
        <property type="protein sequence ID" value="ADO56709"/>
        <property type="gene ID" value="PPSC2_12835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2732"/>
    <dbReference type="eggNOG" id="COG4188">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_026278_2_1_9"/>
    <dbReference type="OMA" id="RTQNTAW"/>
    <dbReference type="OrthoDB" id="685252at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003847">
        <property type="term" value="F:1-alkyl-2-acetylglycerophosphocholine esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005065">
        <property type="entry name" value="PAF_acetylhydro-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10272">
        <property type="entry name" value="PTHR10272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03403">
        <property type="entry name" value="PAF-AH_p_II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="500" mass="56512" checksum="D7485CC113D1EE4A" modified="2011-01-11" version="1">MRLFELLLLLSNIGLFSLTFLLKKGRRRIPVFVTSGIATLLLVIHWTVEGYRIQLFFPYCITIIFLAISGYSYFKKNGPKKIPRFMLGLAYTAIAIMLVVTAGLMYAFPVFKLPEPTGEFKVGTQTFHFVDTNREEIFDESREGKRELMVQVWYPAQASTGKYAPFIPDTQILRYMAANYGLPGFTFQHLRYVSSHTYSGAEVSSAQTSYPLILANPGNGSSRFLHTSQAENLASHGYIVAVIDHTYNTFATEFPDGRITTSTTNDLFSPDHDYQTSRGNRDKLGKVLTGDVAFALDQFELIQSGQIPSHLKGRIDLGHVGVFGHSIGGATAYDASYDPRIAVGVDLDGGLYRLRDREGLRKPFLFINSESYFEKLKMVMDNRVYTDAELNRMGSTREWEDQVTEDKKLELERMRETVDEGGQVLYIENTEHLNFADVQFISPIFKMLGITGKIAPERANSVINAYMLDFFDRYLKNQGGILMKGPDSRFPEVKFVTSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E644</accession>
    <name>E3E644_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rpiR3</name>
        <name evidence="3" type="ORF">PPSC2_12940</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371333.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00625"/>
    <dbReference type="EnsemblBacteria" id="ADO56729">
        <property type="protein sequence ID" value="ADO56729"/>
        <property type="gene ID" value="PPSC2_12940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2757"/>
    <dbReference type="eggNOG" id="COG1737">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055769_2_1_9"/>
    <dbReference type="OMA" id="ERENNHY"/>
    <dbReference type="OrthoDB" id="992687at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05013">
        <property type="entry name" value="SIS_RpiR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000281">
        <property type="entry name" value="HTH_RpiR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035472">
        <property type="entry name" value="RpiR-like_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01418">
        <property type="entry name" value="HTH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51071">
        <property type="entry name" value="HTH_RPIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH rpiR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="125"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="33042" checksum="68A1AD5AC9E2E42F" modified="2011-01-11" version="1">MKILMQLSEMQNFTPNEKSIASYILVHKESILHLNIQELAKATYTSHSAINRLIHKLGLSGFKEFIIKLAREFQQDTQNISNVDPNYPFGFDETPLQVAKEIAELMKETIEKNFTFMDDHLLSQTAQLLDQANRIFIYALGDSQIRAKSFQNKLVKINKYVVIATELSEWAYHTANLTSEDCAIFLTYHGKSPIFLKAARHFTRENIPFITITATNQSELAKRSSICIQVPNDEVKHAKIGTFSSQIAFDYVLNVIYSCIYKIDYLKNMQTLTQSLENSHLNDMMNDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E669</accession>
    <name>E3E669_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ADP-ribose pyrophosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371358.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00755"/>
    <dbReference type="EnsemblBacteria" id="ADO56754">
        <property type="protein sequence ID" value="ADO56754"/>
        <property type="gene ID" value="PPSC2_13065"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13065"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2782"/>
    <dbReference type="eggNOG" id="COG1051">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037162_3_0_9"/>
    <dbReference type="OMA" id="YWSLPGT"/>
    <dbReference type="OrthoDB" id="1846332at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045830">
        <property type="entry name" value="AraR_wHTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19368">
        <property type="entry name" value="AraR_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="28"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="301" mass="34943" checksum="C2ACA30969F92E95" modified="2011-01-11" version="1">MKDKLKHNHSGLTEEQFLALYDANQYERPSVTVDMLLFTVMDQLQQNYRKLPEKTLQLLLIQRGEHPFIGQWALPGGFVDMNESLEEAARRELKTETNVDQIYMEQLYTWGDVARDPRMRVISCAYMALVDHESLEVQAGDDAADAQWFELDYSVVQETRTNQPEGYTWEQNIDITLKHADILLSAKVKVTEILKGKTIEIKREVLESQGIAFDHAKIIAYGIERLRSKIEYTDIAFHLMPALFTLSELQQVYEIILGKELLAAAFRRKIADLVEETNEYRKAAGHRPSKLYRFKPRSRFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6I1</accession>
    <name>E3E6I1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Permease IIC component</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">licC</name>
        <name evidence="11" type="ORF">PPSC2_20070</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372813.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4291"/>
    <dbReference type="EnsemblBacteria" id="ADO58241">
        <property type="protein sequence ID" value="ADO58241"/>
        <property type="gene ID" value="PPSC2_20070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4278"/>
    <dbReference type="eggNOG" id="COG1455">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_029688_1_2_9"/>
    <dbReference type="OMA" id="AQFFWVI"/>
    <dbReference type="OrthoDB" id="425893at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004501">
        <property type="entry name" value="PTS_EIIC_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004796">
        <property type="entry name" value="PTS_IIC_cello"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006351">
        <property type="entry name" value="PTS_EIIC-Cellobiose"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00410">
        <property type="entry name" value="lacE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51105">
        <property type="entry name" value="PTS_EIIC_TYPE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="72"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="106"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="148"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="184"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="231"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="295"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="393"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-3" evidence="10">
        <location>
            <begin position="7"/>
            <end position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR006351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="431" mass="47011" checksum="F2890249F0202E9D" modified="2011-01-11" version="1">MAFKDKLIDGLTSVANAINNFKYIIAIKSAFITLMPVIIVGAFAVLISNVVMDPVNGLAHFKSFSFLAEYKPIFSSINYASLNILTILAIFMIGLELGKINGEKNLFPGLLALICFISVTPTTIELMVNGEMQKVTDVIARQFTDTKSLFLGIFISILSVELYNKLGKSDKLKIKMPESVPSNVAVSFSALIPSIITVTVFSMLGFFFHKFTGLYLYDAVYNVVQQPLETIVQGLPGILVLMLVAQTFWVIGIHGNQMVKPIREPLLLGAITVNMTAYDQGLPIPNIITMPFWDVYMSIGGSGVTLALLISIMIASKREDMKEITKLSLGPGLFNINEPVIFGLPIMLNPLMAIPFIITPLITGTIGYFSTLLGFAGKAVVMVPWTTPPIINAYLSTGGSIGAVVTQIICIMVAIIIYFPFVKIANKRTTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6I3</accession>
    <name>E3E6I3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">PTS cellobiose transporter subunit IIB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">celA5</name>
        <name evidence="6" type="ORF">PPSC2_20080</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372815.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4293"/>
    <dbReference type="EnsemblBacteria" id="ADO58243">
        <property type="protein sequence ID" value="ADO58243"/>
        <property type="gene ID" value="PPSC2_20080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4280"/>
    <dbReference type="eggNOG" id="COG1440">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147323_2_1_9"/>
    <dbReference type="OMA" id="ANYECSI"/>
    <dbReference type="OrthoDB" id="1846001at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003501">
        <property type="entry name" value="PTS_EIIB_2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013012">
        <property type="entry name" value="PTS_EIIB_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02302">
        <property type="entry name" value="PTS_IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
        <property type="entry name" value="SSF52794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51100">
        <property type="entry name" value="PTS_EIIB_TYPE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168869" evidence="4">
        <location>
            <begin position="27"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-3" evidence="5">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphocysteine; by EIIA" evidence="3">
        <location>
            <position position="8"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="108" mass="11510" checksum="9BCAA5B9A3519696" modified="2011-01-11" version="1">MKKIILACSAGMSTSILVSKMKKEAAARSIELNIEAIPESTIKEELEGMTEPVIAILLGPQVRMRKKPVTEIAAPYGIPVDVIDTLAYGRGNGAAVLDQAFKLAGENL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6M7</accession>
    <name>E3E6M7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rbcR3</name>
        <name evidence="3" type="ORF">PPSC2_20270</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372859.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07525"/>
    <dbReference type="EnsemblBacteria" id="ADO58287">
        <property type="protein sequence ID" value="ADO58287"/>
        <property type="gene ID" value="PPSC2_20270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4321"/>
    <dbReference type="eggNOG" id="COG0583">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039613_6_1_9"/>
    <dbReference type="OMA" id="QRGMAVG"/>
    <dbReference type="OrthoDB" id="750230at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="300" mass="33672" checksum="C5515D27C0702A5D" modified="2011-01-11" version="1">MNISQLETLIMISKTMSFRKAGELLNLTQPAVSAQIKSLEDEFKTILIDRNQPVTLTDRGVVFLEHAERILEVVEELRQRLYDLNETPQGHIALGTTTSIAIQILPRVLSYFQDQFPLIKTSIQSMASSMIYQQVENGLIDVGIGYLIERNPNLSTSVLYYDSFELVVSPTHPLASQPHATIEALREIPLILLSPDTVGRKFVDDVFKKHQIVPHVVIELSSSEEVKRMVEINLGAAIISRLSVTSELRTGTLKMIHIPELEVSHPVGVIYKSGRYLNSAMQQFLSDLKGMPETNFTNSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6U2</accession>
    <name>E3E6U2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cell surface protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">surfC</name>
        <name evidence="4" type="ORF">PPSC2_21310</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
            <topology evidence="1">Peptidoglycan-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373062.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4545"/>
    <dbReference type="EnsemblBacteria" id="ADO58494">
        <property type="protein sequence ID" value="ADO58494"/>
        <property type="gene ID" value="PPSC2_21310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4530"/>
    <dbReference type="eggNOG" id="COG5386">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_092243_2_0_9"/>
    <dbReference type="OMA" id="HNYTIRF"/>
    <dbReference type="OrthoDB" id="1450557at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd06920">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006635">
        <property type="entry name" value="NEAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037250">
        <property type="entry name" value="NEAT_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05031">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00725">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158911">
        <property type="entry name" value="SSF158911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50978">
        <property type="entry name" value="NEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168656" evidence="2">
        <location>
            <begin position="41"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="domain" description="NEAT" evidence="3">
        <location>
            <begin position="42"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO58494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18358" checksum="67CAAB41CB80A692" modified="2011-01-11" version="1">MNMIMNRMEKLSLKKVMLTVLMAALVFVVLAPFSANQANAALPNGTYQLPYTVFKDGTTQPSYMDTNGYVKKPATLIVTNGQYKVRVAITKSAWVTEFKTQQNGQYVNATVVSTSGDTRIVEFPVTSSSQKLNVKLHVSVPKEYTGGIPYDHDYVVQFQFDDSDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E736</accession>
    <name>E3E736_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein translocase subunit SecE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">secE</name>
        <name evidence="8" type="ORF">PPSC2_22510</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the SecE/SEC61-gamma family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013312170.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09975"/>
    <dbReference type="EnsemblBacteria" id="ADO58738">
        <property type="protein sequence ID" value="ADO58738"/>
        <property type="gene ID" value="PPSC2_22510"/>
    </dbReference>
    <dbReference type="GeneID" id="66575565"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22510"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4772"/>
    <dbReference type="eggNOG" id="COG0690">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_113663_8_0_9"/>
    <dbReference type="OMA" id="EMKRVSW"/>
    <dbReference type="OrthoDB" id="1974284at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.1030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00422">
        <property type="entry name" value="SecE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005807">
        <property type="entry name" value="SecE_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038379">
        <property type="entry name" value="SecE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001901">
        <property type="entry name" value="Translocase_SecE/Sec61-g"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33910">
        <property type="entry name" value="PTHR33910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00584">
        <property type="entry name" value="SecE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01650">
        <property type="entry name" value="SECETRNLCASE"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00964">
        <property type="entry name" value="secE_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01067">
        <property type="entry name" value="SECE_SEC61G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="33"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="63" mass="7389" checksum="99954F35DC3A10B8" modified="2011-01-11" version="1">MKRSFKSLFSFFSESWAELKKVRWPNRKELTNYTLIVIGTIAFVTIYFWVLDIGISAVIEAII</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7B6</accession>
    <name>E3E7B6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glutamine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">glnQ11</name>
        <name evidence="7" type="ORF">PPSC2_23605</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373507.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11110"/>
    <dbReference type="EnsemblBacteria" id="ADO58971">
        <property type="protein sequence ID" value="ADO58971"/>
        <property type="gene ID" value="PPSC2_23605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4997"/>
    <dbReference type="eggNOG" id="COG1126">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="QVHKYYG"/>
    <dbReference type="OrthoDB" id="1191583at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="9"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="110"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="41"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="251" mass="28634" checksum="96AB8ECC08628C70" modified="2011-01-11" version="1">MGEAVEVLLEIRGLDKSFGDRKVLQQISLDVRKGEVVVILGPSGCGKSTLLRCLNGLEPVQGGDIRYRGQDLTDTKVNWREVRQHIGMVFQNYELFPHMTVLENILLGPLKVQRRNRQEALAQAEQLLERVGLLDRKDAYPRQLSGGQKQRIAIVRALCMNPEIMLFDEVTASLDPEMVREVLDVMRELAQQGMTMIIVTHEMGFAKSVGDRIVFMDQGQICEMTTPQQFFTQPETERAQHFLDIFQYETI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7H4</accession>
    <name>E3E7H4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">PTS mannose transporter subunit IIB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ydhM</name>
        <name evidence="6" type="ORF">PPSC2_24595</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373718.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12075"/>
    <dbReference type="EnsemblBacteria" id="ADO59185">
        <property type="protein sequence ID" value="ADO59185"/>
        <property type="gene ID" value="PPSC2_24595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5210"/>
    <dbReference type="eggNOG" id="COG1440">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147323_2_1_9"/>
    <dbReference type="OMA" id="IGPQMSF"/>
    <dbReference type="OrthoDB" id="1846001at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003501">
        <property type="entry name" value="PTS_EIIB_2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013012">
        <property type="entry name" value="PTS_EIIB_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02302">
        <property type="entry name" value="PTS_IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
        <property type="entry name" value="SSF52794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51100">
        <property type="entry name" value="PTS_EIIB_TYPE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168041" evidence="4">
        <location>
            <begin position="26"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-3" evidence="5">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphocysteine; by EIIA" evidence="3">
        <location>
            <position position="8"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="105" mass="11447" checksum="19D0F726FFE18B90" modified="2011-01-11" version="1">MKKILLACSSGMSTSLLVTKMQEYAKSIGDEAEIWAVGQDQAAEDMAKADAVLIGPQMSFLKGQLEKEASQYGIHVEVIDMMAYGMVDGKKAYEQAVKLVERKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Y7</accession>
    <name>E3E7Y7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Pyrroline-5-carboxylate reductase</fullName>
            <shortName evidence="2">P5C reductase</shortName>
            <shortName evidence="2">P5CR</shortName>
            <ecNumber evidence="2">1.5.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">PCA reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">proC</name>
        <name evidence="5" type="ORF">PPSC2_14320</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>L-proline + NAD(+) = 1-pyrroline-5-carboxylate + 2 H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:14105"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15893"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="EC" id="1.5.1.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>L-proline + NADP(+) = 1-pyrroline-5-carboxylate + 2 H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:14109"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15893"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="EC" id="1.5.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-proline biosynthesis; L-proline from L-glutamate 5-semialdehyde: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pyrroline-5-carboxylate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371619.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01975"/>
    <dbReference type="EnsemblBacteria" id="ADO57020">
        <property type="protein sequence ID" value="ADO57020"/>
        <property type="gene ID" value="PPSC2_14320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3057"/>
    <dbReference type="eggNOG" id="COG0345">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042344_0_1_9"/>
    <dbReference type="OMA" id="AKQTCLG"/>
    <dbReference type="OrthoDB" id="1349288at2"/>
    <dbReference type="UniPathway" id="UPA00098">
        <property type="reaction ID" value="UER00361"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004735">
        <property type="term" value="F:pyrroline-5-carboxylate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055129">
        <property type="term" value="P:L-proline biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01925">
        <property type="entry name" value="P5C_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028939">
        <property type="entry name" value="P5C_Rdtase_cat_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029036">
        <property type="entry name" value="P5CR_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000304">
        <property type="entry name" value="Pyrroline-COOH_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11645">
        <property type="entry name" value="PTHR11645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03807">
        <property type="entry name" value="F420_oxidored"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14748">
        <property type="entry name" value="P5CR_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000193">
        <property type="entry name" value="Pyrrol-5-carb_rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00112">
        <property type="entry name" value="proC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0641">Proline biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F420_oxidored" evidence="3">
        <location>
            <begin position="13"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="P5CR_dimer" evidence="4">
        <location>
            <begin position="175"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="30990" checksum="315888B7121BD5F6" modified="2011-01-11" version="1">MCESQTKVLINEQITFFGAGSMAEAIIRGMTNRSVVKRGGITVINRSNQARLEELQQQYGVLFQTEDAAKTELLRHSPVIVLAMKPKDAAGALEQLGPLLSDEQLIISVIAGLSIRTMQTLLGRKQPIARTMPNTSSSIGLGATGISFSKEISESQRKNVLTMFESVGTVTVIEEEKMDVLTGISGSGPAYVYYLMEAMIAGGIRGGLTPEQAHELTVQTALGAARMVQQTGEEPSALRHKIMSPNGSTVAALETLDKGDFYETVIAAVQRCAERSREMGAVLKEGIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E800</accession>
    <name>E3E800_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_14760</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371709.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57113">
        <property type="protein sequence ID" value="ADO57113"/>
        <property type="gene ID" value="PPSC2_14760"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14760"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3150"/>
    <dbReference type="eggNOG" id="ENOG503067G">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_155211_0_0_9"/>
    <dbReference type="OMA" id="SKWFLNF"/>
    <dbReference type="OrthoDB" id="1727853at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="113" mass="13020" checksum="E34506B096EA20E2" modified="2011-01-11" version="1">MNQELSRVQTYGSRRNGRKGKEEDRPKPKPVRSRASRPMPELVDVAAAPEVAVTMEEDTPASEYRTRTEMFPSRRIRVSKWFLNFLSTLFVLITAALLWWGIKGAPPISEMLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E872</accession>
    <name>E3E872_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Methylenetetrahydrofolate reductase (NAD(P)H)</fullName>
            <ecNumber evidence="5">1.5.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">yitJ</name>
        <name evidence="13" type="ORF">PPSC2_15475</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + NAD(+) = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:19821"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.5.1.20"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + NADP(+) = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19817"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.20" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371853.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03125"/>
    <dbReference type="EnsemblBacteria" id="ADO57264">
        <property type="protein sequence ID" value="ADO57264"/>
        <property type="gene ID" value="PPSC2_15475"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15475"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3306"/>
    <dbReference type="eggNOG" id="COG0646">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0685">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_453272_0_0_9"/>
    <dbReference type="OMA" id="TNTYAAN"/>
    <dbReference type="OrthoDB" id="118138at2"/>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106312">
        <property type="term" value="F:methylenetetrahydrofolate reductase NADH activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106313">
        <property type="term" value="F:methylenetetrahydrofolate reductase NADPH activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006555">
        <property type="term" value="P:methionine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00537">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003171">
        <property type="entry name" value="Mehydrof_redctse-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02219">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="SSF51730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="SSF82282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0274">FAD</keyword>
    <keyword evidence="7" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 11 13" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11 13" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Hcy-binding" evidence="12">
        <location>
            <begin position="2"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="270"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="271"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO57264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="628" mass="68291" checksum="7A060556663DC3BF" modified="2011-01-11" version="1">MKPDLRTVLNREIIVGDGAMGTFLSQLGFPVNTSYEELNITSPGVISDVHGQYLNAGARLLETNTFSANDYKLARFGLESKVEEINRAGVRIARAAAGPEHYVVGAVGSICGGKRLNISKLELSRNYEQQIDALLSEGVDGILCETFYSLDEMRIALHSVRKYSDIPVICQFAVDQIGRTQDGFLMAQAFSTLRSEGADILGFNCHSGPQGIMSVMEQLDGPLSVPLSVYPNAGLADYVDGHYVYGASPEYFGECATSFVDLGTRLIGGCCGTTPDHIAAISKALNNLQPPPLAPKETFSTEVIHVVEQTADEGGRGNGRHTSEPNIVDLVKERHTVIVELDPPRDLDITRFMQGAHALKKAGADALTLADNSLAVTRMSNMALGHLVSIETGLRPLIHIACRDRNLIGTQSHMMGFDALGIDHVLAVTGDPARFGDLPGASSVYDMTSFEIIRMIKQLNDGVAFSGKPLKQKANFVVGAAFNPNVKHLGKAVQRLEKKIASGADYIMTQPVYDPELIKAIAEQTRHLEIPIFIGIMPLASGRNAEYLHNEVPGIQLSDEVRARMSGLEGPEGRAMGVSIAKELLDTAMEHFNGIYFMTPFMFYEMTAELTSYVWQKSGRAQAPLFRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8E4</accession>
    <name>E3E8E4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Purine nucleoside phosphorylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ylmD</name>
        <name evidence="11" type="ORF">PPSC2_16555</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>adenosine + H(+) + H2O = inosine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:24408"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:17596"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.4"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="4">
            <dbReference type="Rhea" id="RHEA:24409"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>adenosine + phosphate = adenine + alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:27642"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="2">
            <dbReference type="Rhea" id="RHEA:27643"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>inosine + phosphate = alpha-D-ribose 1-phosphate + hypoxanthine</text>
            <dbReference type="Rhea" id="RHEA:27646"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:17596"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="1">
            <dbReference type="Rhea" id="RHEA:27647"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>phosphate + S-methyl-5'-thioadenosine = adenine + S-methyl-5-thio-alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11852"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58533"/>
            <dbReference type="EC" id="2.4.2.28"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="3">
            <dbReference type="Rhea" id="RHEA:11853"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="5 9">Belongs to the purine nucleoside phosphorylase YfiH/LACC1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372078.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="SMR" id="E3E8E4"/>
    <dbReference type="STRING" id="1406.LK13_03890"/>
    <dbReference type="EnsemblBacteria" id="ADO57493">
        <property type="protein sequence ID" value="ADO57493"/>
        <property type="gene ID" value="PPSC2_16555"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16555"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3534"/>
    <dbReference type="eggNOG" id="COG1496">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065784_0_0_9"/>
    <dbReference type="OMA" id="CFADCVP"/>
    <dbReference type="OrthoDB" id="1393323at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004000">
        <property type="term" value="F:adenosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017061">
        <property type="term" value="F:S-methyl-5-thioadenosine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd16833">
        <property type="entry name" value="YfiH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003730">
        <property type="entry name" value="Cu_polyphenol_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038371">
        <property type="entry name" value="Cu_polyphenol_OxRdtase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011324">
        <property type="entry name" value="Cytotoxic_necrot_fac-like_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30616">
        <property type="entry name" value="PTHR30616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02578">
        <property type="entry name" value="Cu-oxidase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64438">
        <property type="entry name" value="SSF64438"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00726">
        <property type="entry name" value="TIGR00726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="32349" checksum="CAA3EAEBF0794034" modified="2011-01-11" version="1">MEPFIVNTEATGTTPMQDGRRPVPELLYIQSWERQVQGLTAGFTGRHGGVSEAPYDSLNCAFHVGDDPEKVIRNRRLIAEQLGFAAEAWTCGEQVHGNHVAVVQAADRGRGFMDRASAFQDTDGLLTNIPGILLTSFYADCVPLYFCDPVHRVIGLAHAGWKGTVAEIALKMVQTMQTEYGSQPSDILAAIGPSIGPESYEVDEHVMSQIRVLEHDCPGNDKWEGSVYFPLTGGKTLLDLKQCNRHIMMKAGILPSHIECTTLCTSSRSDLFFSYRKEGGVTGRMASWIGLEER</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8I2</accession>
    <name>E3E8I2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">terC3</name>
        <name evidence="2" type="ORF">PPSC2_16735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372115.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3575"/>
    <dbReference type="EnsemblBacteria" id="ADO57531">
        <property type="protein sequence ID" value="ADO57531"/>
        <property type="gene ID" value="PPSC2_16735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3571"/>
    <dbReference type="eggNOG" id="COG0861">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_070543_0_1_9"/>
    <dbReference type="OMA" id="FPWIIYL"/>
    <dbReference type="OrthoDB" id="1917125at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005496">
        <property type="entry name" value="Integral_membrane_TerC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022301">
        <property type="entry name" value="Integral_membrane_YjbE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03741">
        <property type="entry name" value="TerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03717">
        <property type="entry name" value="R_switched_YjbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="199"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="231" mass="25307" checksum="9E44D749491ACEC5" modified="2011-01-11" version="1">MRTIDMSVLQFFWLLLNVIFIDLLLAGDNAIVIGLAARKLPPATQKKAILYGTGGALLIRIAATIVVLWLLQVPWLLLIGGVMLVWIAYKLLVDQEDHAEVKAGTTLWGAIRTIIVADAAMGLDNVIAVAGAAQQHLLLVVLGLLISVPIVVWGSTLFIKLINKFPWIIYLGSAVLGYTASNMITEERKLAPYFTEHPALRILFIATVMAGILLTGYLQNRRAVSRREKAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8J5</accession>
    <name>E3E8J5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flavin oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">flr</name>
        <name evidence="2" type="ORF">PPSC2_16790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372128.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04125"/>
    <dbReference type="EnsemblBacteria" id="ADO57544">
        <property type="protein sequence ID" value="ADO57544"/>
        <property type="gene ID" value="PPSC2_16790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3583"/>
    <dbReference type="eggNOG" id="COG1853">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059021_5_3_9"/>
    <dbReference type="OMA" id="WHTYIGS"/>
    <dbReference type="OrthoDB" id="1681849at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016646">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002563">
        <property type="entry name" value="Flavin_Rdtase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01613">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00903">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavin_Reduct" evidence="1">
        <location>
            <begin position="10"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="188" mass="21267" checksum="4B29696B8EB4FCF8" modified="2011-01-11" version="1">MRKLIADSVIHAYPGMVAVVTSRYEGVNNVMASGWHTYIGSSPGMYGISLRKETYSYGLIKKSGGFGVQFLPAHRSEWIQAVGTFSGRDIDKFQQFGIAYEDGISVDVPILLEAYLAYECKVVDIHTYGDHDWIVGEIQQTYRDDELFLDEDVPNFSKLSIPLYVGRSAYYVADDSLQRKVHPFYLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E949</accession>
    <name>E3E949_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YraG1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yraG1</name>
        <name evidence="1" type="ORF">PPSC2_24895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373789.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12385"/>
    <dbReference type="EnsemblBacteria" id="ADO59256">
        <property type="protein sequence ID" value="ADO59256"/>
        <property type="gene ID" value="PPSC2_24895"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24895"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5276"/>
    <dbReference type="eggNOG" id="ENOG5033AQH">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_191305_0_0_9"/>
    <dbReference type="OMA" id="NYALHEV"/>
    <dbReference type="OrthoDB" id="2088785at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="70" mass="7813" checksum="E48CD6781D7C6597" modified="2011-01-11" version="1">MVYGLHETLEVHELSAFKTVCLTKSKTMQALISDPVLKAILQKDVDLTTRQLQELGNILNQASSSQEVKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E953</accession>
    <name>E3E953_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NAGPA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373793.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5323"/>
    <dbReference type="EnsemblBacteria" id="ADO59260">
        <property type="protein sequence ID" value="ADO59260"/>
        <property type="gene ID" value="PPSC2_24910"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24910"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5279"/>
    <dbReference type="HOGENOM" id="CLU_1179294_0_0_9"/>
    <dbReference type="OrthoDB" id="1399734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018711">
        <property type="entry name" value="NAGPA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09992">
        <property type="entry name" value="NAGPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAGPA" evidence="1">
        <location>
            <begin position="38"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="26273" checksum="4B8BE4F7B44B891C" modified="2011-01-11" version="1">MPANYSYTKTSDGFHVIITPASNIQNKNIRSRITQQTDYGINGGFFYPISTTKPPTQGLSMAVTPNNTHDIKANAKENSRGTAFIFTESNKTKIGITRTSSVTDLKKQMGTAIKYKSIISGGSLSLKNEEEVWLKELKEIENFDLNGTLRYTESIGRTGLGFKVVNNIWQVYLVVHENATLKQLRNYFIKQDCFEAILLDGGGSSGIQVKNSAGTMVKYEQTRYIYNMVKLINIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9K0</accession>
    <name>E3E9K0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Peptidase M28</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ysdC</name>
        <name evidence="9" type="ORF">PPSC2_17185</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="8">Binds 2 divalent metal cations per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the peptidase M42 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372212.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04520"/>
    <dbReference type="EnsemblBacteria" id="ADO57631">
        <property type="protein sequence ID" value="ADO57631"/>
        <property type="gene ID" value="PPSC2_17185"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17185"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3670"/>
    <dbReference type="eggNOG" id="COG1363">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047249_0_2_9"/>
    <dbReference type="OMA" id="FGWPAIH"/>
    <dbReference type="OrthoDB" id="900854at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008007">
        <property type="entry name" value="Peptidase_M42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023367">
        <property type="entry name" value="Peptidase_M42_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05343">
        <property type="entry name" value="Peptidase_M42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001123">
        <property type="entry name" value="PepA_GA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="322"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR001123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001123-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001123-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="359" mass="39210" checksum="01C0212FC0EDE93A" modified="2011-01-11" version="1">MEAKTLELFKTLTEFPSIPGHERELRAWVKERISGYTDEIVQDRLGSLFGVLRGQESGPRVMVAGHLDEVGFIVNGITENGMIRFQPVGGWWSQAIMSQRLQVLTPNGPIIGVVGSVSPHLLDEAQRSKPMDIKNMYLDIGVDSRQEAQDLGIVPGTAIAPICDFTPLANPKKIMAKAWDNRYGVGLALELLEALHKEKDQLPNTLYAGATVQEEVGLRGARTAANLIQPDIFFALDCSAANDMGGDPNAYGQLGKGALLRVFDPGMITHRGIVEYVQDMADTHKIKYQYFISTGGTDAGQVHLSGIGVPSTVIGICGRYIHTSSSIIHTDDYDAAKELIIKLVQNLDRTTLNTIIERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9T5</accession>
    <name>E3E9T5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Beta-lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_18320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372454.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3923"/>
    <dbReference type="EnsemblBacteria" id="ADO57875">
        <property type="protein sequence ID" value="ADO57875"/>
        <property type="gene ID" value="PPSC2_18320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3920"/>
    <dbReference type="eggNOG" id="COG2367">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_745239_0_0_9"/>
    <dbReference type="OMA" id="REGNDIQ"/>
    <dbReference type="OrthoDB" id="991474at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008800">
        <property type="term" value="F:beta-lactamase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030655">
        <property type="term" value="P:beta-lactam antibiotic catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045155">
        <property type="entry name" value="Beta-lactam_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000871">
        <property type="entry name" value="Beta-lactam_class-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35333">
        <property type="entry name" value="PTHR35333"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13354">
        <property type="entry name" value="Beta-lactamase2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-lactamase2" evidence="2">
        <location>
            <begin position="58"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="374" mass="43051" checksum="A8E774368645A150" modified="2011-01-11" version="1">MQIILLLVAITLIFVFICILFLLIAKRQNNKKTEIDVLSFLKENPSKASLYMIKNGMEKISYNSEVKMPLASTAKVIIAIEFARQVAAKLLDEHELVDLEELNKFYIPGSDGNAHNSWIKWIKSNHKEVQGKITLFEIAHGMLAYSSNANTEFLMDKMGLDEINENINKLSLSLHDKIFPFSSAGLMSSYIQEVDKIGFKESIQKISEMTYKEYMEKSIEIHQILNSDKGLGCIQKWNTKQNYARRLQVLESRKLPRSTTKEYAYLMKLIHKEELVPSTLNPYLKMLIQRQVDNSKLIEFGNKGGSTISVLTEALYCTDREGNDIQLAMFIQDDSGVDHIWLKQKLDLFFHKLLTDTEFQKEVSKKLSYDKGRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA24</accession>
    <name>E3EA24_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_19680</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372729.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06900"/>
    <dbReference type="CAZy" id="GT4">
        <property type="family name" value="Glycosyltransferase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58157">
        <property type="protein sequence ID" value="ADO58157"/>
        <property type="gene ID" value="PPSC2_19680"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19680"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4196"/>
    <dbReference type="eggNOG" id="COG0438">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009583_2_2_9"/>
    <dbReference type="OMA" id="CWRDTGH"/>
    <dbReference type="OrthoDB" id="694191at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="27"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="191"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="408" mass="47421" checksum="31E60725FB9A054D" modified="2011-01-11" version="1">MNTILEQNGKTVVLLLSWRDIRSPKSGGAEIFTHEMLKRTQQGRFQFIHFSPQFEGMPEHEVIDGITYIRKGNIYSVIYYAMRYYRLHRQQIDYVINQANTHQFFTRFWVEASKRIFFIHQLTREIWYENARFPLNMIGFHMEPLMLKLARKDRTLTVSPSTRYDLLKLGFHPDRVHLLPEGIEFDHWPREQFLMKESNPTFMYAGRFVKYKGIDLVVEAFGQLKEKFPQAMLWIAGKTDKTYVTEQLLPIIERYELTYGEPDEQGQSQADITFYGFVSAEHKLELMSRAHALVFPSLREGWGLTITEAAAVGTPSIVSNSPGLVDATDFGKSGYLCFHGDIRGLSEQMERAAKGGEDYMAIRERAYQYALRFHFDHTAAAFEQLMENWAEEAEQSGQSGHSLLHVQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA98</accession>
    <name>E3EA98_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Sodium:alanine symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">alsT</name>
        <name evidence="9" type="ORF">PPSC2_20740</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372959.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07985"/>
    <dbReference type="EnsemblBacteria" id="ADO58390">
        <property type="protein sequence ID" value="ADO58390"/>
        <property type="gene ID" value="PPSC2_20740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4423"/>
    <dbReference type="eggNOG" id="COG1115">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024867_0_0_9"/>
    <dbReference type="OMA" id="CSATGFM"/>
    <dbReference type="OrthoDB" id="883596at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015655">
        <property type="term" value="F:alanine:sodium symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001463">
        <property type="entry name" value="Na/Ala_symport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30330">
        <property type="entry name" value="PTHR30330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01235">
        <property type="entry name" value="Na_Ala_symp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00175">
        <property type="entry name" value="NAALASMPORT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00835">
        <property type="entry name" value="agcS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00873">
        <property type="entry name" value="NA_ALANINE_SYMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0769">Symport</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="57"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="91"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="137"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="179"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="203"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="235"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="296"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="356"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="395"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="426"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="496" mass="53648" checksum="E4DB18CD8C7ECB1D" modified="2011-01-11" version="1">MLEKWAEAVNGVIWSNPVVYVCLSVGLLFSIMTRFLQIRHFKEMIRLVFKGKSSEAGVSSFQAFTMALSGRVGTGNIAGIALAVGMGGPGAIFWMWVMAFIGSATAFVESTLAQIYKVKRDGQYRGGPAFYIEKGTGLKWFAVIFAVVALVAMCLLLPGTQSNSIAVAFHNSFGMDMKVSGIVVVVLLALIIFGGVKRIANVAQVVIPFMALGYILVSFYIMVTNITALPDVFTLIFRSAFGIDSVFGGIAGTAIAWGVKRGIYSNEAGQGSGAHPAAAAEVSHPAKQGLVQAFSVYVDTFLVCTSTAFMVLFTGMYNVKGPGGGYIVQHLPGVEEGTQYTQAAIESVFPGFGSSLLSITLFFFAFTTIIAYYYIAETNMAYLVADRKARWPMFLLKLVILGSTFYGTVVKESALAWTLGDMGVGIMMWVNLIAMILLAKPALLVLKDYERQRRQGLDPVFDPKQAGISNADYWSQAYQHPSDETKITVEPGKLQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAX0</accession>
    <name>E3EAX0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Nucleoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">iunH3</name>
        <name evidence="4" type="ORF">PPSC2_23905</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373569.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11410"/>
    <dbReference type="EnsemblBacteria" id="ADO59034">
        <property type="protein sequence ID" value="ADO59034"/>
        <property type="gene ID" value="PPSC2_23905"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5058"/>
    <dbReference type="eggNOG" id="COG1957">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036838_2_1_9"/>
    <dbReference type="OMA" id="VYFGPGF"/>
    <dbReference type="OrthoDB" id="1763387at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016799">
        <property type="term" value="F:hydrolase activity, hydrolyzing N-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006139">
        <property type="term" value="P:nucleobase-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901564">
        <property type="term" value="P:organonitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.245.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001910">
        <property type="entry name" value="Inosine/uridine_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023186">
        <property type="entry name" value="IUNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036452">
        <property type="entry name" value="Ribo_hydro-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12304">
        <property type="entry name" value="PTHR12304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01156">
        <property type="entry name" value="IU_nuc_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53590">
        <property type="entry name" value="SSF53590"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IU_nuc_hydro" evidence="3">
        <location>
            <begin position="4"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="309" mass="33306" checksum="6756B863C0ED4585" modified="2011-01-11" version="1">MKKIILDVDTGIDDALGILLAAKSGQLDIQAITTVCGNVSLKQATLNTCKILNLLERPDIPVFRGAEAPLIRKGLHEHRVHGEDGIGGALSGIVPAISASEGFAPDIIIETVMAHSGEVTLVCTGPLTNLALALLKCPDLTDHVHEVIFMGGVIHGCGNITPVAEYNMYADPEAARIVFHAGFSRLIQVGLDVTRKALLTADHVARLTRPEIRDYVAESTAVYTKRYEERNGVKACALHDPLAVGVALNSRLVDTSLLYVDVETSSRICDGQTVGDVQNRLNHSPNMNVCEQVDSEAFLELFIQVLNKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAY0</accession>
    <name>E3EAY0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373579.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5106"/>
    <dbReference type="EnsemblBacteria" id="ADO59044">
        <property type="protein sequence ID" value="ADO59044"/>
        <property type="gene ID" value="PPSC2_23945"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23945"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5067"/>
    <dbReference type="eggNOG" id="ENOG5032ZK3">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_423800_0_0_9"/>
    <dbReference type="OMA" id="MKQASRI"/>
    <dbReference type="OrthoDB" id="1654926at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168763" evidence="1">
        <location>
            <begin position="34"/>
            <end position="673"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="673" mass="76881" checksum="A602E55146624192" modified="2011-01-11" version="1">MSYLKYARICYVLLLLISCVVLNGCMKEQESPATETNHALSLQNDDKTISYSKKLDTLVKKLRIVNDENKDSDIRQNKLEEFTQELNLLLNEPESVEMKDEELVEKFDNNLTILTKSFPLKSGQLNVRVMNYRAPKTVTGTIGDKYTFIQWWSTKQLVHAQMIEGGGPELTTDFVVRDSDQGVKLWLGGHVSTYHPNPVFVDLWELSGQKWTQKSIDIGMMKLPDAWELNKDMKKPIILESRQHDSMSIGVLDHGDGFLINSDDSEQSLIIEFSKSGEVRIDSEYSTASDAHNETQSYGLIQEKYSKNGIVIKYPQITKLKDIAKQKSLNQILKTDALEGLQNYADSNSGVHVEMDYEIKRQSERFLSVQYMGIRYVKDAAYPTHMFYTTNLDMKQASRIRLRDLVKVENPFIELIKSGKNTAVQPEQQGLIGDFTKDDLIQLLANADVTKGSIAEVEMGSFSYFTNDSLGMSVPMAHMVGDHAEYEIRLAQIPENIRQNEELWSELSSVEDQSVSTVGGEKLNTDQYEIEESQSFQTTLEGFGKVRFVSTKTRENEIPKNYFFLLDDRERIIYSFPDMYGNEWWYADEVIEAVAFRDVNKDGLKDIIIIAYYETGTGPDGAKPFPIADIYFQKKNKTFTTIPALDETLNDQGHNRTIKDVVQYVSKQRINVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAZ4</accession>
    <name>E3EAZ4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Selenocysteine lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373807.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12470"/>
    <dbReference type="EnsemblBacteria" id="ADO59274">
        <property type="protein sequence ID" value="ADO59274"/>
        <property type="gene ID" value="PPSC2_24975"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24975"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5292"/>
    <dbReference type="eggNOG" id="COG0520">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_003433_9_3_9"/>
    <dbReference type="OMA" id="PYVRIDM"/>
    <dbReference type="OrthoDB" id="446447at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_5" evidence="1">
        <location>
            <begin position="45"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="502" mass="56137" checksum="F621068F406D7A34" modified="2011-01-11" version="1">MLMARIGSSNCRYQPSNEAHFQKYRENTIGYHQTFESPYGLKKLIYADWAASGRLYGPIESKIANELGPFVANTHTESNLTGTLMTQAYEKAKQIIKNHVHANEHDIILFAGSGMTGAVNKLQRLLGLKIHEKLKPLYPIAEKDRPVIFVTHMEHHSNHISWAETIGDVVCLPPGPGGIVDPAHLERLLHQFRHRPIKIGAFTACSNVTGFEVPIHQLSRKMHEHGGVCFIDFSASAPYAEIDMHPTDPLEKLDGIVFSPHKFLGGPGTSGVLIMDSRLCLHCAPDQPGGGTVSWTNPWGGYEYKNSIEAREDGGTPPFLQAVRTALCIQLKEQMGYSRMWERKKELTSLLLKGLGIIPGLHILGGSSQDRLGIVSFVVGHIHYNLIVKLLNDRFGIQVRGGCSCAGPYGHYLLGIDQQASKQMTELIHAGNLSRKPGWVRLSLHPMMTNQEASYIVSSIRAIVENIITWQKDYTYQPESNEWRSMNEHNKMDISKWFNFSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAZ5</accession>
    <name>E3EAZ5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_24980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373808.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59275">
        <property type="protein sequence ID" value="ADO59275"/>
        <property type="gene ID" value="PPSC2_24980"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24980"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5293"/>
    <dbReference type="eggNOG" id="COG5480">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1592949_0_0_9"/>
    <dbReference type="OMA" id="CTTCRNV"/>
    <dbReference type="OrthoDB" id="1759042at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009380">
        <property type="entry name" value="DUF1036"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06282">
        <property type="entry name" value="DUF1036"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="137"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="19394" checksum="0ACE392587410FD4" modified="2011-01-11" version="1">MGLNFRNSTNAAIFVVFAYPDFSCTPVNYSKAGWYRVNPGQTIQVWSGFAGGNTFFYYAEDDFGRTWQGSYFTQVPENAFDWCWDTGCTTCRNVGLRRIAVSPFVLNYTIDFIRSSSQRKPASTTLRMTLPSKATQEKPILRRVPAKPKRLQQGKPQLQKRITHKKRTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB29</accession>
    <name>E3EB29_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">DNA-directed RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">sigW15</name>
        <name evidence="8" type="ORF">PPSC2_25125</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373842.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12625"/>
    <dbReference type="EnsemblBacteria" id="ADO59309">
        <property type="protein sequence ID" value="ADO59309"/>
        <property type="gene ID" value="PPSC2_25125"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5325"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047691_3_4_9"/>
    <dbReference type="OMA" id="AQVMERQ"/>
    <dbReference type="OrthoDB" id="1914729at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="6">
        <location>
            <begin position="24"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4" evidence="7">
        <location>
            <begin position="125"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="23272" checksum="42BB83C587D88B29" modified="2011-01-11" version="1">MNEEIEYRIKQVQAGEIQDYAYIVKEYQRQIFVYCWRLLGSEQEAEEAVQDIFVNAFEKISRYKPTVGFSSWLYKMAYHHCLNLIRRKNLQRKFKLSLFTSTNMTSDSAAQVMERQLFSEPLSRALDQLSAEERNLLVLRIFEERTFGEIGEIMNKSEEAIKKKYGRTKTKLKKIMEPLKEDHKCVSYKTELKNKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB37</accession>
    <name>E3EB37_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA-directed RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpoD3</name>
        <name evidence="4" type="ORF">PPSC2_25165</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373850.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12660"/>
    <dbReference type="EnsemblBacteria" id="ADO59317">
        <property type="protein sequence ID" value="ADO59317"/>
        <property type="gene ID" value="PPSC2_25165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5334"/>
    <dbReference type="eggNOG" id="COG1595">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_512719_0_0_9"/>
    <dbReference type="OMA" id="LWFEYDL"/>
    <dbReference type="OrthoDB" id="959432at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014973">
        <property type="entry name" value="DUF1835"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08874">
        <property type="entry name" value="DUF1835"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="2">
        <location>
            <begin position="20"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="3">
        <location>
            <begin position="115"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="525" mass="60371" checksum="CA6EC8B8517A77FC" modified="2011-01-11" version="1">MQCWIEEARLGDQNAWKQIVQHFSGMAFSVAYTRLGDWSLVEDTVQEGFAEAFANLHKLQEAEAFPGWFKIIVERQCHRILRRKRPTMVPLAETIVMDVEKYDVELIAERREWHQKLHQSVEGLSDKLKLAVQLYYFQGYSIGEISSYLSVSPSVLKKRLFDARNKLRASLLVTDFVSMFNDIYEGGESMLHIVNGDHVGDKLRKGNIRGDILVWREVYPVGPVSLEMSEHSSRAARVEYLERTLGIPGEDYVSNCKTQEQVLHNFHKYDEVVLWFEHDLFDQLMLSYLLHWFSTQTLGQTKLSLLCIGNYPGIDPFRGLGQLTTKQLEKLSGTWQQIGQQELETGKGIWETYASPDITRHVDILREDTSALPFAHAALELHLSRLPSTMNGLGIVEQTTLELVQQGVNSPQELFKQIGNRMSGLGMGDLEFWYRLRNMSEQPHALLEIQGPHSFPDHQKKTTPSFDQCVVALTEVGRNITAGAHDWVKMKGIDEWYGGLWLQGDLAWRWDSERNQLVYTEPYHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBN5</accession>
    <name>E3EBN5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flagellar biosynthesis protein FlgN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvyG</name>
        <name evidence="3" type="ORF">PPSC2_23060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373391.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10545"/>
    <dbReference type="EnsemblBacteria" id="ADO58853">
        <property type="protein sequence ID" value="ADO58853"/>
        <property type="gene ID" value="PPSC2_23060"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23060"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4884"/>
    <dbReference type="eggNOG" id="COG3418">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_132586_0_0_9"/>
    <dbReference type="OMA" id="EQKYIQA"/>
    <dbReference type="OrthoDB" id="2010300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007809">
        <property type="entry name" value="FlgN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036679">
        <property type="entry name" value="FlgN-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05130">
        <property type="entry name" value="FlgN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140566">
        <property type="entry name" value="SSF140566"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0966">Cell projection</keyword>
    <keyword evidence="3" id="KW-0969">Cilium</keyword>
    <keyword evidence="3" id="KW-0282">Flagellum</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="2">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="145"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="166" mass="19357" checksum="F9C2EEC24224D769" modified="2011-01-11" version="1">MPLERLIGVLEQLDQKHLILLELAKSKKKIVMENDMDSLVQHLNQESRLLKQVEQLEEARMEVSYELLRERGIKSQLNLTITELARLVFDPEDKNKLLSVQSRLSHTLSELKEINEINQKLIEQSLVFIDYSLDLLVGRPNQEMTYMHPDQKSNQHARPGLFDTKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBP4</accession>
    <name>E3EBP4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373400.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4922"/>
    <dbReference type="EnsemblBacteria" id="ADO58862">
        <property type="protein sequence ID" value="ADO58862"/>
        <property type="gene ID" value="PPSC2_23090"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23090"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4891"/>
    <dbReference type="eggNOG" id="ENOG50305TJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_152474_0_0_9"/>
    <dbReference type="OMA" id="VWILLIY"/>
    <dbReference type="OrthoDB" id="1934133at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="16284" checksum="1B51593979DAA769" modified="2011-01-11" version="1">MTAHLVWILLIYGVGAAVVHLMYIRQAVQAYHNGEDAHTTSLDHRATRYIVITSNDGDRVEWVMRSLSILAWLHRRPLHVTVLDDESIDDTLPILTRLVRYSHMDVSVISCRFSPGNPVLPKSGGEKQVVIDLRTANPLAGAPLVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBQ1</accession>
    <name>E3EBQ1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">S-adenosylmethionine synthase</fullName>
            <shortName evidence="11">AdoMet synthase</shortName>
            <ecNumber evidence="11">2.5.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">MAT</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Methionine adenosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 17" type="primary">metK</name>
        <name evidence="17" type="ORF">PPSC2_23125</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + H2O + L-methionine = diphosphate + phosphate + S-adenosyl-L-methionine</text>
            <dbReference type="Rhea" id="RHEA:21080"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.5.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="11">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="11">Binds 2 divalent ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Amino-acid biosynthesis; S-adenosyl-L-methionine biosynthesis; S-adenosyl-L-methionine from L-methionine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homotetramer; dimer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11 12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11 13">Belongs to the AdoMet synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.6" evidence="11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373407.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10610"/>
    <dbReference type="EnsemblBacteria" id="ADO58869">
        <property type="protein sequence ID" value="ADO58869"/>
        <property type="gene ID" value="PPSC2_23125"/>
    </dbReference>
    <dbReference type="GeneID" id="66575448"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23125"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4898"/>
    <dbReference type="eggNOG" id="COG0192">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041802_1_1_9"/>
    <dbReference type="OMA" id="MPYLRPD"/>
    <dbReference type="OrthoDB" id="1024388at2"/>
    <dbReference type="UniPathway" id="UPA00315">
        <property type="reaction ID" value="UER00080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006556">
        <property type="term" value="P:S-adenosylmethionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00086">
        <property type="entry name" value="S_AdoMet_synth1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022631">
        <property type="entry name" value="ADOMET_SYNTHASE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022630">
        <property type="entry name" value="S-AdoMet_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022629">
        <property type="entry name" value="S-AdoMet_synt_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022628">
        <property type="entry name" value="S-AdoMet_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="PTHR11964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02773">
        <property type="entry name" value="S-AdoMet_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02772">
        <property type="entry name" value="S-AdoMet_synt_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00438">
        <property type="entry name" value="S-AdoMet_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000497">
        <property type="entry name" value="MAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="SSF55973"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01034">
        <property type="entry name" value="metK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00376">
        <property type="entry name" value="ADOMET_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00377">
        <property type="entry name" value="ADOMET_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 11 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 11" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="10 11 12" id="KW-0630">Potassium</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11 17" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S-AdoMet_synt_N" evidence="14">
        <location>
            <begin position="7"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="S-AdoMet_synt_M" evidence="15">
        <location>
            <begin position="130"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="S-AdoMet_synt_C" evidence="16">
        <location>
            <begin position="248"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="region of interest" description="Flexible loop" evidence="11">
        <location>
            <begin position="103"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="179"/>
            <end position="181"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="245"/>
            <end position="246"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="260"/>
            <end position="261"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <note>ligand shared between two neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="281"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <note>ligand shared between two neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="285"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF02773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO58869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="400" mass="43486" checksum="134B9ECA448DCFD8" modified="2011-01-11" version="1">MSVKGRHLFTSESVTEGHPDKICDQISDAVLDAFLANDPNARVACEVSVATGLVLVIGEISSKSEYVDIPSIVRNTIKEIGYTRAKYGFDYNTCAVLTSLNEQSPDIAQGVNAALESRDPAEVDKETENIGAGDQGLMFGFATNETPELMPLPIAMSHRIARRLSEVRKDGTLNYLRPDGKTQVTVEYENGKPVRIDAIVVSTQHAEDTTLEQIQADIKEKVILPVVPAELLDEQTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGLADKVEIQLAYAIGVATPVSINVDTYGTGKVSDEKLVELIRNNFDLRPAGIIRMLDLRRPIYKQTAAYGHFGRTDLDVPWESVDKAEILREQAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBR8</accession>
    <name>E3EBR8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cell shape-determining protein MreB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mbl</name>
        <name evidence="2" type="synonym">mreB</name>
        <name evidence="3" type="ORF">PPSC2_23210</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Forms polymers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="2">Membrane-associated.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the FtsA/MreB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58887.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324820.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10695"/>
    <dbReference type="EnsemblBacteria" id="ADO58887">
        <property type="protein sequence ID" value="ADO58887"/>
        <property type="gene ID" value="PPSC2_23210"/>
    </dbReference>
    <dbReference type="GeneID" id="66575431"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4915"/>
    <dbReference type="eggNOG" id="COG1077">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052037_0_0_9"/>
    <dbReference type="OrthoDB" id="410781at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000902">
        <property type="term" value="P:cell morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd10225">
        <property type="entry name" value="MreB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02207">
        <property type="entry name" value="MreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004753">
        <property type="entry name" value="MreB"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01652">
        <property type="entry name" value="SHAPEPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00904">
        <property type="entry name" value="mreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0133">Cell shape</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="12"/>
            <end position="14"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="156"/>
            <end position="158"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="204"/>
            <end position="207"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="284"/>
            <end position="287"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58887.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="332" mass="35515" checksum="4099617234B3DF23" modified="2015-05-27" version="2">MFSNDIGIDLGTANVLIHVKGKGVVLDEPSVVAIESDTKRVLAVGEEARRMVGRTPGNIIAIRPLRDGVIADFEVTEAMLKYFINRVGGKSWYSHPRILICAPTNITSVEQKAIREAAERSGAKEVFLEEEPKAAAIGAGMDIFEPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKMAGDKFDTAIMKYVKTKYKLLIGERTAEDIKIAIGTVHPSGRRAEMDIRGRDMVSGLPKTLSISAEEVQDALRDPVSAIVAAAKFVLEQTPPELSADIIDRGVILTGGGALLSGLDELLAEELRVPVLVAEDPMHCVVKGTGIMLDNLDHVVKKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBV7</accession>
    <name>E3EBV7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">2-dehydro-3-deoxygluconokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">kdgK</name>
        <name evidence="4" type="ORF">PPSC2_24110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373616.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11615"/>
    <dbReference type="EnsemblBacteria" id="ADO59081">
        <property type="protein sequence ID" value="ADO59081"/>
        <property type="gene ID" value="PPSC2_24110"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24110"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5104"/>
    <dbReference type="eggNOG" id="COG0524">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027634_6_0_9"/>
    <dbReference type="OMA" id="MAMFYAN"/>
    <dbReference type="OrthoDB" id="1604782at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00584">
        <property type="entry name" value="PFKB_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="3">
        <location>
            <begin position="7"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO59081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="34159" checksum="3DB2A877D820BCC6" modified="2011-01-11" version="1">MTATLDAVTFGEPMAMFYANEAGSLDEVRSFTKALAGAETNVSAGLSRLGLRAGLVTKLGEDTFGKFIADALRQEKIDTQNVMFTKDHSTGMLIKSKVTSGDPEVEYFRRHSAASTLSIADFNEAYFAGARHLHFTGISVALSPECRDFARHAKQFMKKAGKTVSFDPNLRPKLWPDTQTMVEAINEASEGCDWLLPGIHEGKILTGYTSPEDIASFYLDRGTSLVIIKLGTEGAYYKSADAEGYVKRFRVDHVVDTVGAGDGFAAGVISALLEGLPLAEAVKRGNALGALAVMSAGDMDGYPTRAELESFLLSASTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW4</accession>
    <name>E3EBW4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">msmG</name>
        <name evidence="7" type="ORF">PPSC2_24140</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373623.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11645"/>
    <dbReference type="EnsemblBacteria" id="ADO59088">
        <property type="protein sequence ID" value="ADO59088"/>
        <property type="gene ID" value="PPSC2_24140"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24140"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5111"/>
    <dbReference type="eggNOG" id="COG0395">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_1_2_9"/>
    <dbReference type="OMA" id="YIVFQRQ"/>
    <dbReference type="OrthoDB" id="1584669at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="106"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="181"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="274" mass="30879" checksum="2BA50A77C8995F1B" modified="2011-01-11" version="1">MKTSRRTNWPVLILVALGTIFILFPLYMTVTIALKNPEQMAHSAFAFPTELHWENFSRAVEMTNFFSAFQNSVMVTTSTVILTLLTNSMVAYAIARNMQRHFFKGLYFYFVSAMFIPFPIIMLPIVKLASGLHMTNLLGLIVLHTVYGLAFNVFVYVGYIRSIPVALEEAATVDGATTWGTFWRIIFPLMAPISATVGILTCLSTYNDFLLPLIIISDAEQYTLPLVQYVFQGQFNTDFNLAFASYLMALLPMIIVYLIAQKWIINGVTQGSVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EC91</accession>
    <name>E3EC91_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-385</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-385</name>
        <name evidence="1" type="ORF">PPSC2_01245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368877.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0248"/>
    <dbReference type="EnsemblBacteria" id="ADO54234">
        <property type="protein sequence ID" value="ADO54234"/>
        <property type="gene ID" value="PPSC2_01245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.242"/>
    <dbReference type="eggNOG" id="COG3012">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_051477_0_0_9"/>
    <dbReference type="OrthoDB" id="1108150at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="349" mass="40658" checksum="75BF9647FA11EEB2" modified="2011-01-11" version="1">MFAERGWILYDMMSLATAEEAVKRAEDGDIEGAEQKLVEYYDAETTRLHLSMMQAIKAFRPRLRLAYRALTDYEEERYHACIPVVLALLDGLVNDIHQNRKGFFAEDIEFEAWDSLAAHSKGLGQLASIFRKGRRSTTTDPLTLPYRNGILHGTDLGYDNRLVAAKTWATLFSLRDWALKVENGKDKPPVEKPKESLRKVMSKYSETLKEHNELQKWKPREIILNDEFVFQEGSPEFVLNEFMELWKRKNYGYMSKLVQLNKVDDKQKPKKVKEKLADCLLKDFKFLSINDIAAATAIELSMQIEKNNIITEYQYAYSLINIDEENKFVRRGKPGSKWKIEKWNYQSAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECF1</accession>
    <name>E3ECF1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="15">PTS system transporter subunit IICB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">ptsG1</name>
        <name evidence="15" type="ORF">PPSC2_01530</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368936.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14225"/>
    <dbReference type="EnsemblBacteria" id="ADO54294">
        <property type="protein sequence ID" value="ADO54294"/>
        <property type="gene ID" value="PPSC2_01530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.304"/>
    <dbReference type="eggNOG" id="COG1263">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1264">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012312_1_1_9"/>
    <dbReference type="OMA" id="EFMFMFV"/>
    <dbReference type="OrthoDB" id="2035550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00212">
        <property type="entry name" value="PTS_IIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036878">
        <property type="entry name" value="Glu_permease_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018113">
        <property type="entry name" value="PTrfase_EIIB_Cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013013">
        <property type="entry name" value="PTS_EIIC_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001996">
        <property type="entry name" value="PTS_IIB_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011300">
        <property type="entry name" value="PTS_IIBC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00367">
        <property type="entry name" value="PTS_EIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55604">
        <property type="entry name" value="SSF55604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00826">
        <property type="entry name" value="EIIB_glc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02003">
        <property type="entry name" value="PTS-II-BC-unk1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51098">
        <property type="entry name" value="PTS_EIIB_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01035">
        <property type="entry name" value="PTS_EIIB_TYPE_1_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51103">
        <property type="entry name" value="PTS_EIIC_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="85"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="130"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="179"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="308"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="337"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="359"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="414"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-1" evidence="14">
        <location>
            <begin position="4"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-1" evidence="13">
        <location>
            <begin position="476"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphocysteine intermediate; for EIIB activity" evidence="11">
        <location>
            <position position="498"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO54294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="554" mass="59201" checksum="5D2C36D22AED4DE2" modified="2011-01-11" version="1">MKKLLSFDFWQKLGKALLVVVAVMPAAGIMISLGKVVAMLAGDIHFWVTVGGVMENLGWGIINNLHILFAVAIGGSWAKERAGGAFAALIAFVLINISTGTILGVSSKMLTQEGATTHTLFGASIPVSGYFTSILGAPALNMGVFVGIISGFVGAVVFNKYYNYRKLPDALAFFNGKRFVPFVVILWSVIVSLIMSAVWPFVQGGINQFGVWLATSGESAPFIAPFVYGTLERLLIPFGLHHMLTVPINYTQLGGVYTVLTGSGAGSVVAGQDPLWLAWASDLSALRGTDPAAYNSLLGGVTPARFKVGQMIGGAGILMGLAVAMYRRVDKDKRGKYKSMIFSAAAAVFLTGVTEPLEFMFMFVAPVLYVVYAILTGIAFGMADIIHLRLHSFGMIELLTRLPLSINAGLVQDIINFVLTCVVFAVATYFIAYFMIGKFKMATPGRLGNYTDEEPQATSEAESTKADGLAAVSTNNQLAANIIKTLGGEQNIVEVDACMTRLRVTVKDTEAVGDEKTWKALGALGLIKVDNGVQAVYGPKADVLKSDIQDILNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECH1</accession>
    <name>E3ECH1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yteT</name>
        <name evidence="3" type="ORF">PPSC2_01620</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368956.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14385"/>
    <dbReference type="EnsemblBacteria" id="ADO54314">
        <property type="protein sequence ID" value="ADO54314"/>
        <property type="gene ID" value="PPSC2_01620"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01620"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.324"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052304_0_0_9"/>
    <dbReference type="OMA" id="TIDRTHH"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="145"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="428" mass="49024" checksum="AF88B928F0EC9F20" modified="2011-01-11" version="1">MAKIKYALVGTGGRAEFFYGEVVTVFKDTSELVAFCDVNQTRMDYANRLLQEKYEHHPIPTYKAHEFDRMIAETKPDIVIVTTIDRVHHHYIIRAMELGCDVISEKPMTVDEDKCQDILDAIDRTGRKLRVTFNYRYAPHNTKIREVIMDGTLGDILSVNFEWLLNTQHGADYFRRWHRDKRNSGGLLVHKSTHHFDLMNFWLGSKPETVYAMGDLKFYGRENAEQRGVTEFYQRAYGSKAAENDPFALHLDRNEHLKNMYLDAEHEDGYVRDQSVFGDNISIEDTLSVMVKYQNKTVMNYSLNAYMPWEGFIIVFNGTKGRMEVRVSEQSYVNSGGSKADEGALKEKTITIYPHFAAPYEVEVEEGVGGHGGGDPVMLRDIFDKPAEDRFHRAASHIDGAWSILTGIAANRSMRTGQPVKVEQLVRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECI7</accession>
    <name>E3ECI7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_01695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013308357.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14485"/>
    <dbReference type="EnsemblBacteria" id="ADO54330">
        <property type="protein sequence ID" value="ADO54330"/>
        <property type="gene ID" value="PPSC2_01695"/>
    </dbReference>
    <dbReference type="GeneID" id="66574642"/>
    <dbReference type="KEGG" id="ppm:PPSC2_01695"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.339"/>
    <dbReference type="eggNOG" id="ENOG5032YUY">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_197449_0_0_9"/>
    <dbReference type="OMA" id="KEDCIGW"/>
    <dbReference type="OrthoDB" id="1995338at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025916">
        <property type="entry name" value="YdjO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14169">
        <property type="entry name" value="YdjO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="71" mass="8004" checksum="419D58FBE287DF03" modified="2011-01-11" version="1">MYNSRKKPMDEIPEEITTVWNCASDTCNGWMRDNFAFSVEPTCPICGSAMVKGEKKLAVLNNTSFNHTKQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECR7</accession>
    <name>E3ECR7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sugar translocase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yngA</name>
        <name evidence="8" type="ORF">PPSC2_01840</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GtrA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54361.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599404.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14605"/>
    <dbReference type="EnsemblBacteria" id="ADO54361">
        <property type="protein sequence ID" value="ADO54361"/>
        <property type="gene ID" value="PPSC2_01840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.370"/>
    <dbReference type="eggNOG" id="COG2246">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083873_4_2_9"/>
    <dbReference type="OrthoDB" id="1813832at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007267">
        <property type="entry name" value="GtrA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04138">
        <property type="entry name" value="GtrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="110"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="GtrA" evidence="7">
        <location>
            <begin position="13"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54361.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="140" mass="15380" checksum="43B6F5A0369733C5" modified="2015-05-27" version="2">MKSRMAQLLPMIRFGIVGLVNTGVDYIIFMLLAWTGVPVVVAQIISYSCGTANSYILNSKWTFSKQQANNTSKGQLLKFIVINLIVLGITSLLLQVLHTETKLPLALGKLIATAAGMIINYIGSRYWVFGSPSRKESESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED68</accession>
    <name>E3ED68_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydhD1</name>
        <name evidence="3" type="ORF">PPSC2_02280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369065.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15030"/>
    <dbReference type="CAZy" id="GH18">
        <property type="family name" value="Glycoside Hydrolase Family 18"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54425">
        <property type="protein sequence ID" value="ADO54425"/>
        <property type="gene ID" value="PPSC2_02280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.433"/>
    <dbReference type="eggNOG" id="COG3858">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047970_0_0_9"/>
    <dbReference type="OMA" id="PYLMVYS"/>
    <dbReference type="OrthoDB" id="1081028at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008061">
        <property type="term" value="F:chitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011583">
        <property type="entry name" value="Chitinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001223">
        <property type="entry name" value="Glyco_hydro18_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00704">
        <property type="entry name" value="Glyco_hydro_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00636">
        <property type="entry name" value="Glyco_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51910">
        <property type="entry name" value="GH18_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168844" evidence="1">
        <location>
            <begin position="29"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="domain" description="GH18" evidence="2">
        <location>
            <begin position="150"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="415" mass="45040" checksum="471B8E7965168521" modified="2011-01-11" version="1">MKIVNKALLSSVIFLSTAAGIYSPLAQAEAGKVSIMLDGYPLPFPVQPAMMNGTTMVPFRAISEALGITVKWDQANQSITATKAQGNATKQVVLKMGSRNATVDGQTVQLTAAPQTVRGSTMIPLGFFGQQFGATVNWNQGTRTVSITSPREAMYTVGFYALSSFDQKSKIPNFNAVAFGWSRIDTNGQFTTTGKEYKWPQAAGAVTPESILQEADSQGTSPYLMVYSVDGNHELTKILENAQLQEQTISQIVSTATDKQFKGITLDLEGLGWSGDKAKARSDYNAFIKKLSAKAHQAGLKLTVVLHPLNSSYTGYDYKTLGNLADDLIIMAYDYGQKSTPEPLDKVDEAIKLALKETSRDKLILGISMGSEKDSTVNAKIGLAKRYDLKGIAIWRLGIIGETAWAKMNESIEFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED81</accession>
    <name>E3ED81_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">M1-592</name>
        <name evidence="5" type="ORF">PPSC2_02345</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54438.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885862.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15110"/>
    <dbReference type="EnsemblBacteria" id="ADO54438">
        <property type="protein sequence ID" value="ADO54438"/>
        <property type="gene ID" value="PPSC2_02345"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02345"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.447"/>
    <dbReference type="eggNOG" id="COG1116">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OrthoDB" id="1832232at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="33"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="69"/>
            <end position="76"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO54438.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="317" mass="36033" checksum="F502300771AE2CA8" modified="2015-05-27" version="2">MSLHPTDLTSPPVADEQQQAGELQVMTPAPPALELDGISLVFRKRRSSLPVLQDVSLTVKPGEFVSLIGPSGSGKSTLFHIIGGLLKPQQGRIRMHGRDMTGERGHISYMPQQPALFPWRTTLDNILLGQENAPRKDAAAGSRYGSERERRKEALQWLEQVGLGKFAKAYPHTLSGGMQQRAAFLRALLSPQELMLLDEPFSALDALTRADMQQWLLRMWEKNRRSVLFITHSIEEALLLSDRIYVLSARPASVMHVVDVPFPRPRREEITLDPRFMEWKRTMTGWMREEKHKLDGDMDAAESIRKYTSDDRVNHYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDD0</accession>
    <name>E3EDD0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">M1-1047</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-1047</name>
        <name evidence="2" type="ORF">PPSC2_04545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369542.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54909">
        <property type="protein sequence ID" value="ADO54909"/>
        <property type="gene ID" value="PPSC2_04545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.913"/>
    <dbReference type="eggNOG" id="ENOG50305VZ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_902670_0_0_9"/>
    <dbReference type="OMA" id="NIANYSD"/>
    <dbReference type="OrthoDB" id="1728395at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168802" evidence="1">
        <location>
            <begin position="25"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="318" mass="35165" checksum="AB37F24F5C218882" modified="2011-01-11" version="1">MKVKKYIILMTAVMSLSAMLAACGDSKKQNEGEATTGATISTVATATQTPKVDQDVAGQVSAEATASSTMDKATKAGTNTKTYADMAKEATKLDQQAGQIGLNTTQEQLLSFADRYGLVRVPNHPIRRVSDPTGKHINIANYSDSVVNLYTEKPIHPNTDEFIHEAYTYFTEGVAPGETYKKWEETSNTERGLIKMLYLSREGLLILEEAMKTHDYSTPSVQNTLGFFKVASKFESMMPVAQTPTDISLYNMYDQQVKPEWKKLSDIKNPAANEKAFAAAYQKARNETNNLMGLLNIMVSTEMEKRLKAATDPQKTEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDG6</accession>
    <name>E3EDG6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Diadenosine tetraphosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">prpA1</name>
        <name evidence="3" type="ORF">PPSC2_04720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369578.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17615"/>
    <dbReference type="EnsemblBacteria" id="ADO54945">
        <property type="protein sequence ID" value="ADO54945"/>
        <property type="gene ID" value="PPSC2_04720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.948"/>
    <dbReference type="eggNOG" id="COG0639">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4639">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016728_0_0_9"/>
    <dbReference type="OMA" id="VCEEKHM"/>
    <dbReference type="OrthoDB" id="72029at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd07423">
        <property type="entry name" value="MPP_Prp_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041780">
        <property type="entry name" value="MPP_PrpE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024028">
        <property type="entry name" value="PNKP_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032390">
        <property type="entry name" value="PNKP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032380">
        <property type="entry name" value="PNKP_ligase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16536">
        <property type="entry name" value="PNKP-ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16542">
        <property type="entry name" value="PNKP_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04075">
        <property type="entry name" value="bacter_Pnkp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNKP_ligase" evidence="2">
        <location>
            <begin position="493"/>
            <end position="806"/>
        </location>
    </feature>
    <feature type="domain" description="PNKP-ligase_C" evidence="1">
        <location>
            <begin position="810"/>
            <end position="869"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="869" mass="99005" checksum="416155050EA618AB" modified="2011-01-11" version="1">MSISSERTINLPHAGLVVLVGASNSGKTTLLDRLVSEGILLKTEVVSSDHFRQLVGDTEFIDWSGLPRLESDVLFYEYQQMSAKAFEAMDTILAMRCRLNKLTVVDATHLYAEDRQKYVQLAAKAHVPVMALVLDVPESVLLERDSGRAHPRGRQRVKQQTQLLKRNLRGIREEGFDACYVLKDVEKVNFARCAQPLFHDMGAGIDIIGDIHGCYREMLEVIERLGYMEDTEGLYHHPEGRRLVSVGDVMSRGPESLLAVQFWKKHVDAGLAYMIDSNHGWKIGRYLDGRKVTLNHGDERFAEEMVQYEQKAGKVAAEQLRGELRDFLLHAPSHLIFGRNGLRHVVVTHAGIKDHFIGKQSARISDYCRYGDTEGQDADGKPIRKDWFVDHESGEIVVWGHDPRPQPTLVNQTVNIDQGVVFGGMLTAYRYPEKEFVSVPAHENYANDPDSPLVRWQRKRFSPPNLRKLIAGYSVLTESYGEVRVQGESVKTAIDTVSHVTVPMEELVYIPPTMSPAPKVSGEEGYLEHPREALAYYRSQGVQTMVAEKKHMGSRAILLLFKNELAAVEYVGYPTLGTIYTRSGRPFFESGFGKQVLEKLNADLVDAGYFEQNQTDFVLLDAEIVPWNLKARELIAAQYAHVGEAALLDRSKLVDKLKQAKVAGREVGDWLEEMEQKYGNAVTFQEAFQKYCWDVDGLDEIRIAPFHTLAHSGQTFFDQSHIWHMEHNRELAGLSSIFMETEYRVITDETSEEEVIRWWNEMTEDGHEGIVIKPERFLMKNRDKMIQPAIKVRGRKYLHIIYGMDYLVPENLKRLKQRRTNKKERHALMEGALGMEGVERFVRKDTVERIHECVLAALSLESEPIDPRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDW2</accession>
    <name>E3EDW2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-188</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-188</name>
        <name evidence="1" type="ORF">PPSC2_00195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368676.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13210"/>
    <dbReference type="EnsemblBacteria" id="ADO54028">
        <property type="protein sequence ID" value="ADO54028"/>
        <property type="gene ID" value="PPSC2_00195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.38"/>
    <dbReference type="eggNOG" id="ENOG502ZVGN">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2827036_0_0_9"/>
    <dbReference type="OMA" id="DSHFLYH"/>
    <dbReference type="OrthoDB" id="1993420at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="66" mass="7850" checksum="625950866CF8F977" modified="2011-01-11" version="1">MLNQGDILLYDSHFLYHLKHSVPVQIYDGNVHVQIGIVARFNEHFVEIEDTLYNRQRFTFISRPGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE79</accession>
    <name>E3EE79_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mtgF</name>
        <name evidence="8" type="ORF">PPSC2_04995</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369635.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17885"/>
    <dbReference type="EnsemblBacteria" id="ADO55002">
        <property type="protein sequence ID" value="ADO55002"/>
        <property type="gene ID" value="PPSC2_04995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1008"/>
    <dbReference type="eggNOG" id="COG0834">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_18_2_9"/>
    <dbReference type="OMA" id="QPTKWDG"/>
    <dbReference type="OrthoDB" id="847343at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-0564">Palmitate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="6">
        <location>
            <begin position="29"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="PBPe" evidence="7">
        <location>
            <begin position="29"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="27995" checksum="330B9FDF5DB60591" modified="2011-01-11" version="1">MRKAAMFTMMIGLIMIVLAGCSGGKDNSKLIIGIDDKFAPMGFRDENNELTGFDIDYAKAAGEQMGKQVEFQPIDWSAKESELNSGRIDLIWNGYTITDERKEKVLFTKPYLKNSQVIVVPATSSLSKLADLAGKTVGLQTLSSAADALDANPIKSKLKSVSEYPDNVLALTDLKTGRLDAVVIDEVVAKYYMSKEQGTYKLLDESLAPEEYGIGVKKGNEELLTQLQSALDELHKNGKAAEISKKWFGEDKVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEC0</accession>
    <name>E3EEC0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_05190</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369676.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18115"/>
    <dbReference type="EnsemblBacteria" id="ADO55043">
        <property type="protein sequence ID" value="ADO55043"/>
        <property type="gene ID" value="PPSC2_05190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1051"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4753">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_5_0_9"/>
    <dbReference type="OMA" id="IGMGEYL"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041522">
        <property type="entry name" value="CdaR_GGDEF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17853">
        <property type="entry name" value="GGDEF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="3"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="346"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="445" mass="51007" checksum="D6F249DCB4D96EE4" modified="2011-01-11" version="1">MYRLLIADDEALEREGLELIVERAMPGVFRFIHADNGRMAIECAEEHRPHIAILDINMPGIDGLEALRELKERLPDTRFVLVTAYDYFAYAREALSLGVKEYILKPAKRELIISTLKRLIEEIECEKRARTEELELRHKISQLMPLAENELALMLMVDQTVDSSASQLSEWLDFPLDQGSAIIAAFEGYADEQDKKKIYDHFRSYVKTHGPNSIVSSLIDHHVATFLQKPAATSENDWRQLIKHLVQQLSELAQQQFGMKTAIGIGSLHSGEEGLRKSYFEAVFASTLRKRDGGYCHFDELKSSEAGNASELAVKAENGMLQQTYVISALQRIREQREVQTLTMLGRAKMYIEERFNDELSLEEVADFVHLNPHYFSKIFKQEYGETFIDFVTRLRINKAISLIKEGNLALKEISFEVGYKDPNYFSRVFKKITGVPPTEFKSQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEC4</accession>
    <name>E3EEC4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Alpha-galactosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">melA7</name>
        <name evidence="9" type="ORF">PPSC2_05210</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
        <text evidence="6">Binds 1 NAD(+) per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the glycosyl hydrolase 4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369680.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18130"/>
    <dbReference type="CAZy" id="GH4">
        <property type="family name" value="Glycoside Hydrolase Family 4"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55047">
        <property type="protein sequence ID" value="ADO55047"/>
        <property type="gene ID" value="PPSC2_05210"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05210"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1055"/>
    <dbReference type="eggNOG" id="COG1486">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_045951_1_1_9"/>
    <dbReference type="OMA" id="EYVPWYR"/>
    <dbReference type="OrthoDB" id="277080at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001088">
        <property type="entry name" value="Glyco_hydro_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022616">
        <property type="entry name" value="Glyco_hydro_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32092">
        <property type="entry name" value="PTHR32092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02056">
        <property type="entry name" value="Glyco_hydro_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11975">
        <property type="entry name" value="Glyco_hydro_4C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00732">
        <property type="entry name" value="GLHYDRLASE4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="SSF56327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0464">Manganese</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_4C" evidence="8">
        <location>
            <begin position="195"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="477"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF11975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="504" mass="56174" checksum="169845E2570FC2CF" modified="2011-01-11" version="1">MSFKVAFIGAGSIGFTRGILRDLLSVPEFNNIEVAFTDISQHNLDMVTELCQRDIRENGLSIQIQSSTDRKVALKDAKYVICTIRVGGLEAFATDVDIPLKYGVDQCVGDTLCAGGIMYGQRGIAEMLEICKDIRELSAPDVLLLNYSNPMAMMTWACNKYGGVRTVGLCHGVQNGHHQIAEAYGLEKQDVDIVCAGINHQTWYIQASHKGKDLTAGLLEAFEQHPEFSRTEKVRIDMLRRFGYYSTESNGHLSEYVPWYRKRPNEILDWIDLGNWINGETGGYLRVCTEGRNWFETDFPNWMKEEPLEYKAESRGEEHGSYIIEGLETGRVYRGHFNVINHGVISNLPDDAIIEAPGYVDRNGISMPHVGELPLGPAAVCNVSISVQRLAVEAAVHGDDKLLRQAFMMDPLVGAVCNPKEIWQMVDEMLVAQEAWLPQYGAAIAEARQRLAAGDLIPTRPYEGAARLKVKTVEEMQLDRDAANKNAGQSDKGKDREKVQNSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEG0</accession>
    <name>E3EEG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Saccharopine dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lyS1</name>
        <name evidence="2" type="ORF">PPSC2_06880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370042.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19850"/>
    <dbReference type="EnsemblBacteria" id="ADO55411">
        <property type="protein sequence ID" value="ADO55411"/>
        <property type="gene ID" value="PPSC2_06880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1418"/>
    <dbReference type="eggNOG" id="COG1748">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_065081_1_0_9"/>
    <dbReference type="OMA" id="VIMCLDQ"/>
    <dbReference type="OrthoDB" id="1006830at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005097">
        <property type="entry name" value="Sacchrp_dh_NADP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03435">
        <property type="entry name" value="Sacchrp_dh_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sacchrp_dh_NADP" evidence="1">
        <location>
            <begin position="6"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="361" mass="39910" checksum="ADA1C77ACA7A3F24" modified="2011-01-11" version="1">MTKDNIIIIGGYGHVGKIVCTELSEMFPGKVFAAGRSLERATAFSQQSNGKIRPLQLDIHEPIDPSILEQAKMIIMCLDQDNTTLVRTSLQHGVHYMDITANAAFLSQVEQCHQEARAYQVTALLSVGLAPGLTNLLALQATQLMDQTDELNISLMLGLGDQHGQAAIEWTVDQIHTDLEVIEQGRPVTRRSFTDGIVADFGVGVGRHRAYRFPFSDQQTLPRTLNIPTVSTRLCFDSRLTTRLLAGLRTIGISGLLRQPTVRDAVVRSFGKVHLGGNAVAVKVDTQGTRNGKETRVECRLRGHHQSDLTAKAAVFAALALYRSELPYGVFHMEQIFSWNRMRAWLGQQVDVDIQVNGQQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEJ3</accession>
    <name>E3EEJ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">CD4+ T-cell-stimulating antigen</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yufN</name>
        <name evidence="5" type="ORF">PPSC2_07040</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BMP lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370073.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20020"/>
    <dbReference type="EnsemblBacteria" id="ADO55444">
        <property type="protein sequence ID" value="ADO55444"/>
        <property type="gene ID" value="PPSC2_07040"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07040"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1452"/>
    <dbReference type="eggNOG" id="COG1744">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038813_0_0_9"/>
    <dbReference type="OMA" id="ANEMYVD"/>
    <dbReference type="OrthoDB" id="603910at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168834" evidence="3">
        <location>
            <begin position="29"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="domain" description="Bmp" evidence="4">
        <location>
            <begin position="47"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="345" mass="36546" checksum="9AB85A1F0F9D5117" modified="2011-01-11" version="1">MKKLFSMSLVMLLAISVILAGCGNKNQGASNANGGEAGGSAKTSNVQLGMVTDVGGVNDKSFNQSAWEALQAIEKESGVKVKYLQSKSDQDYIPNLNQFVKGDFNLTWGIGFNLANAIGQVAKDNPNKNLAIIDSVVDAPNVKSVVFAENEGSFLVGVVAGKLTKTNKIGFVGGQDSPLIKRFEKGFEAGIKAVNPKAQLNVNYTGAFDKPDLGKAAAATIYNDGADIIFHAAGGSGTGVFNEALARKQQGQQVWVIGVDKDQSLEFGDEVTLTSMVKRVDEAVKRVSQEVIDGKFKGGVETLALKDNGIGLADTSTKNVPKDVLDLVEQYKQKIIKGEITVPSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEL3</accession>
    <name>E3EEL3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase type 11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE1</name>
        <name evidence="2" type="ORF">PPSC2_08160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370323.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20765"/>
    <dbReference type="EnsemblBacteria" id="ADO55700">
        <property type="protein sequence ID" value="ADO55700"/>
        <property type="gene ID" value="PPSC2_08160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1716"/>
    <dbReference type="eggNOG" id="COG2226">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1260419_0_0_9"/>
    <dbReference type="OMA" id="FKFELAR"/>
    <dbReference type="OrthoDB" id="1664438at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="51"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="25411" checksum="A91452B37A8067DA" modified="2011-01-11" version="1">MNMADPYLSRFFVYSDPNSSNMIYRLPQSWWSRPYEYEWCLQFMSGQDTVLDAACGIPHPFKFELARRCAQVYACDLDIRIVSVDAILAEVRRDIGEEAAERIQEILPVRLHSAHANLTALPYEYASFDKIVCISVLEHLTPDESLAALREFHRTLRDDGMLLLTFDYPTVDLSAMEQWIEQAGFSYWSGVDLKLPRGALHTDMWGGLHCFRTVLKKYKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEM8</accession>
    <name>E3EEM8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YutG1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yutG1</name>
        <name evidence="2" type="ORF">PPSC2_08230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370337.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20835"/>
    <dbReference type="EnsemblBacteria" id="ADO55715">
        <property type="protein sequence ID" value="ADO55715"/>
        <property type="gene ID" value="PPSC2_08230"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08230"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1730"/>
    <dbReference type="eggNOG" id="COG1267">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_110655_0_0_9"/>
    <dbReference type="OMA" id="QLKYYPH"/>
    <dbReference type="OrthoDB" id="1603340at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008962">
        <property type="term" value="F:phosphatidylglycerophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06971">
        <property type="entry name" value="PgpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036681">
        <property type="entry name" value="PgpA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026038">
        <property type="entry name" value="Put_PGPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007686">
        <property type="entry name" value="YutG/PgpA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04608">
        <property type="entry name" value="PgpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019587">
        <property type="entry name" value="PGPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101307">
        <property type="entry name" value="SSF101307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PgpA" evidence="1">
        <location>
            <begin position="14"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="165" mass="18311" checksum="D73C823703DF87CB" modified="2011-01-11" version="1">MSYEYAETLLNRRGIQIESIADIVFQLQLKYYPHLTMEECVESVKAVLQKREVQYTLLTGIALDELAEKKLLPQPLQAIMEADEPLYGVDETMALGITSVYGMIGLTSFGYLDKEKIGIIEKLNQKGSGIHVFLDDLVAGLAAAASSRIAHRSLHAKHYPASLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEW6</accession>
    <name>E3EEW6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Flagellar motor protein MotB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">motB</name>
        <name evidence="8" type="ORF">PPSC2_00515</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MotB family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368735.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13520"/>
    <dbReference type="EnsemblBacteria" id="ADO54089">
        <property type="protein sequence ID" value="ADO54089"/>
        <property type="gene ID" value="PPSC2_00515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.100"/>
    <dbReference type="eggNOG" id="COG1360">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016890_0_1_9"/>
    <dbReference type="OMA" id="DEKNRPM"/>
    <dbReference type="OrthoDB" id="1619550at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025713">
        <property type="entry name" value="MotB_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13677">
        <property type="entry name" value="MotB_plug"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0282">Flagellum</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="24"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="OmpA-like" evidence="7">
        <location>
            <begin position="137"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="61"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="275" mass="30360" checksum="583F042F492225C4" modified="2011-01-11" version="1">MSKKRHEPHEEHADESWLLPYSDLMTLLLALFIVLFGMSSLDAKKFETMAQSLSSAFSGGTGVLDHSAANPSSQSMDMGKNKEEVSQPLKSKATSTSDLQKQLAQREEEDLKKLKKQMDQYIQNNGLSTLLNTKLNQSQLMITISDNALFSSGQAEVKPEARKLAKSISSMLQQFPGYDVIVSGHTDNVPISNSQFPSNFDLSAKRSLNFLRILLLNPQLDPTKFVSIGYGEYRPLAGNQTGAGRAKNRRVEISVLRKYQNGTQVISPTSSSNEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF87</accession>
    <name>E3EF87_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gntR5</name>
        <name evidence="2" type="ORF">PPSC2_03200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369244.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16010"/>
    <dbReference type="EnsemblBacteria" id="ADO54607">
        <property type="protein sequence ID" value="ADO54607"/>
        <property type="gene ID" value="PPSC2_03200"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03200"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.613"/>
    <dbReference type="eggNOG" id="COG1725">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_017584_10_4_9"/>
    <dbReference type="OMA" id="PIYHQIE"/>
    <dbReference type="OrthoDB" id="1860081at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="13"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="133" mass="14917" checksum="BBDE0A8B27C88E53" modified="2011-01-11" version="1">MNIPVQIDENSAEPLYAQIEKQLRSLIVTGQIAAGTLLPSIREFAGTLRCSVITVRRVYQDLENEGLLRTRQGTGTFVALVEDDMRSGYRLKAVTEALETAIATGIAVQMTEQELLELFAEMVKRRYEVQVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF99</accession>
    <name>E3EF99_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_05280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369695.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18195"/>
    <dbReference type="EnsemblBacteria" id="ADO55062">
        <property type="protein sequence ID" value="ADO55062"/>
        <property type="gene ID" value="PPSC2_05280"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05280"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1070"/>
    <dbReference type="eggNOG" id="ENOG503399V">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_542723_0_0_9"/>
    <dbReference type="OMA" id="YYVLENR"/>
    <dbReference type="OrthoDB" id="1452786at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="1">
        <location>
            <begin position="411"/>
            <end position="500"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="507" mass="55224" checksum="721F8B70FB0BB6A5" modified="2011-01-11" version="1">MNIKKWIAVPLILLMVALTGCQAVGGFDVSKNLLGTLDVKSQQSTEKISLKLTPKEGITQGDQQIIDLINSISVTVDEAKVQSEEVASAKGTLHIDKYNLPFELALDRQGMAIHLEGAKKPYYISLNSQESLSGLPAGFDPYVYSKDVRDLTKTAAALMLKHAPNPSTISATSVTEEVYGEKDKVKLTRLHTELRGDELVALVKPFLANLAKDEAGLKELIGQAIDMTKTIASSIAIEGSDKVTTELNENKEKLVNEAYTEVKKYLDLAVAQYDVGVSTMYAEAPEIKTVLSANTVLKSDMYFDEKGNVRKALTDLTVALPDVDDLPVKSFTVLTETQSWNVNGSVTADKVDLSNGVIDLNAQAELTPGATLRNFEANSPIYNILKNDLEITKVETIFDPKDDYYVLENRGGTAFIPLRELTGELSSELKWDAAAKQTTVIDDITGKTIKLKSGSKQAVLEGSTLTLPQAPYTDEYGTLYVPFKSVAEALGATVTRNNAGEYVLKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFF9</accession>
    <name>E3EFF9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Sucrose-6-phosphate hydrolase</fullName>
            <ecNumber evidence="3 8">3.2.1.26</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7 9">Invertase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">sacA</name>
        <name evidence="12" type="ORF">PPSC2_05550</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Enables the bacterium to metabolize sucrose as a sole carbon source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.</text>
            <dbReference type="EC" id="3.2.1.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Glycan biosynthesis; sucrose metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.26" evidence="3 8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369755.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1142"/>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55122">
        <property type="protein sequence ID" value="ADO55122"/>
        <property type="gene ID" value="PPSC2_05550"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05550"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1128"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001528_7_1_9"/>
    <dbReference type="OMA" id="PSEWYDK"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="UniPathway" id="UPA00238"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004564">
        <property type="term" value="F:beta-fructofuranosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005985">
        <property type="term" value="P:sucrose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018053">
        <property type="entry name" value="Glyco_hydro_32_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006232">
        <property type="entry name" value="Suc6P_hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01322">
        <property type="entry name" value="scrB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00609">
        <property type="entry name" value="GLYCOSYL_HYDROL_F32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="10">
        <location>
            <begin position="12"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="11">
        <location>
            <begin position="343"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO55122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="463" mass="53880" checksum="7095168430188B84" modified="2011-01-11" version="1">MNKSDAYHLKYHIIPPYGLLNDPNGLAFFNQQYHVFYQWNPQGTEHRNKCWGHVVSSDLVHWQRKGVALEPSEWYDKDGIYSGGAIVHDEKLYLFYTGNVIRNDGVKESYQCAAISEDGEHFQKMGPLFEHPKGYTRHVRDPKVWRDRNGSWWLILGAQREDLTGETLIYKSADLSDWEYQGSFLDHDHEFGYMWECPDLLQFAENDIFVFSPQGLPEAGEYYRNPNQSGYIVGKFMDTGKFSGNLAHFKELDRGFDFYAPQSFKVNDRTIMFGWMSAMNEEAERAVPTIQEGWIHALTLPREIVLSNGVLYQKPLSELQLLRLDGVHSKENIHKNGVWMLPSLQVECIVHFSKLTENFKMIVRNAVEIDYDSEENSLTVWRTNWLTNQREYRKATLANQLVDMQIFIESSSLEIFVNEGEEVFSLRYFLEDTEQRSVMLDAGDNEGEIEIYQLQECGAIINH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFP8</accession>
    <name>E3EFP8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">insK9</name>
        <name evidence="2" type="ORF">PPSC2_08505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55770">
        <property type="protein sequence ID" value="ADO55770"/>
        <property type="gene ID" value="PPSC2_08505"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08505"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1787"/>
    <dbReference type="eggNOG" id="COG2801">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027402_4_3_9"/>
    <dbReference type="OMA" id="SHFKAEC"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00665">
        <property type="entry name" value="rve"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13333">
        <property type="entry name" value="rve_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="126"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="34110" checksum="9711B419CA2CE8A3" modified="2011-01-11" version="1">MTRKEARFEIIEGMRTRYSLKWLLELAHVSRAGYYKWRKTQQTTQQRKQEEELLESHMLSIHRVHPYFGYLRMTVALRREGILVNHKKVYRLMKKLGIRSVIRKKRRFFGKQASVVNANRLDRQFQADSPLSKLVTDITYIRAGERFVYLSVIQDLFNNEIVAWRLSERNDLALVSETLDVLSKNVNMEGVILHSDQGFQYTSKPFNRKLKRLGMLGSHSRRGNCLDNACIESFFSHLKTERIYLTKPGTLAEVEQHVREYISFYNENRFQKKLNNRSPIEYRETVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFR1</accession>
    <name>E3EFR1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_08560</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370402.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1811"/>
    <dbReference type="EnsemblBacteria" id="ADO55783">
        <property type="protein sequence ID" value="ADO55783"/>
        <property type="gene ID" value="PPSC2_08560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1800"/>
    <dbReference type="eggNOG" id="COG5620">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082934_1_0_9"/>
    <dbReference type="OMA" id="CFGYTPL"/>
    <dbReference type="OrthoDB" id="1681112at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015002">
        <property type="entry name" value="DUF1851"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014983">
        <property type="entry name" value="GAD-rel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08906">
        <property type="entry name" value="DUF1851"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08887">
        <property type="entry name" value="GAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GAD-like" evidence="1">
        <location>
            <begin position="13"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1851" evidence="2">
        <location>
            <begin position="105"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="21150" checksum="96D7446441CDC49B" modified="2011-01-11" version="1">MDIGIFNDFELYEKASEKLINKFEGKVPEQLIEVWKQYGFGSILNGYLKIVNPDEFHSLLEEVYIRSKEALVLFTTSMGDLLIWEDNKYLLLLNFRRGKMQDISSGFEFFFSDLEDDSSLQNDLDWLPYPDAIEKYGKPAFDECFGYVPLLGLGGSEKIENLEKVKLIEHIYLNTQFTSLVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFW5</accession>
    <name>E3EFW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">YutE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yutE</name>
        <name evidence="5" type="ORF">PPSC2_08800</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the HepT RNase toxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370455.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_21260"/>
    <dbReference type="EnsemblBacteria" id="ADO55837">
        <property type="protein sequence ID" value="ADO55837"/>
        <property type="gene ID" value="PPSC2_08800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1855"/>
    <dbReference type="eggNOG" id="COG2445">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_142825_1_0_9"/>
    <dbReference type="OMA" id="MYFVDRE"/>
    <dbReference type="OrthoDB" id="1967941at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110001">
        <property type="term" value="C:toxin-antitoxin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008201">
        <property type="entry name" value="HepT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037038">
        <property type="entry name" value="HepT-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01934">
        <property type="entry name" value="DUF86"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="146" mass="16481" checksum="FF1AA8C17CA2EE04" modified="2011-01-11" version="1">MYYVNREQIELRLGAVPDIVAGLRQTSAAWNGDLLQGLVQERCLHLAIETVTDVGSYIIDGFIMRDASSYEDIIGIIHEEGVLDDTVFHSLLELVALRKPLVQEYFHWDRTSLHPLTPKLPGLLELFVSNVHDYLNKELGPQPEGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG37</accession>
    <name>E3EG37_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellar protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">flbD</name>
        <name evidence="1" type="ORF">PPSC2_09905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370683.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22375"/>
    <dbReference type="EnsemblBacteria" id="ADO56070">
        <property type="protein sequence ID" value="ADO56070"/>
        <property type="gene ID" value="PPSC2_09905"/>
    </dbReference>
    <dbReference type="GeneID" id="66577934"/>
    <dbReference type="KEGG" id="ppm:PPSC2_09905"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2087"/>
    <dbReference type="eggNOG" id="COG1582">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_173020_2_1_9"/>
    <dbReference type="OMA" id="HQIESIE"/>
    <dbReference type="OrthoDB" id="2007051at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009384">
        <property type="entry name" value="SwrD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39185">
        <property type="entry name" value="PTHR39185"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06289">
        <property type="entry name" value="FlbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8302" checksum="0BA564044E5482F7" modified="2011-01-11" version="1">MIPLTRLNGSPMWLNALLIETVEETPDTYVTLVTGKRLIVLEKAADVVSLIKSYSREIGMHAATIKVQQMEEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB0</accession>
    <name>E3EGB0_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA polymerase III subunit gamma/tau</fullName>
            <ecNumber evidence="4">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 8" type="primary">dnaX</name>
        <name evidence="8" type="ORF">PPSC2_00720</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the DnaX/STICHEL family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54138.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599367.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13710"/>
    <dbReference type="EnsemblBacteria" id="ADO54138">
        <property type="protein sequence ID" value="ADO54138"/>
        <property type="gene ID" value="PPSC2_00720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.145"/>
    <dbReference type="eggNOG" id="COG2812">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_006229_0_3_9"/>
    <dbReference type="OrthoDB" id="556582at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009360">
        <property type="term" value="C:DNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18137">
        <property type="entry name" value="HLD_clamp_pol_III_gamma_tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022754">
        <property type="entry name" value="DNA_pol_III_gamma-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012763">
        <property type="entry name" value="DNA_pol_III_sug/sutau_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045085">
        <property type="entry name" value="HLD_clamp_pol_III_gamma_tau"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12169">
        <property type="entry name" value="DNA_pol3_gamma3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02397">
        <property type="entry name" value="dnaX_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AAA" evidence="7">
        <location>
            <begin position="37"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="408"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="377"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO54138.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="583" mass="65004" checksum="82E583CCB11E654D" modified="2015-05-27" version="2">MEHIALYRAWRPQAFKDMVGQQHIIQTLQNAIRENRTSHAYLFSGPRGTGKTSAAKILAKAINCEHGPAPEPCNECEACKRITAGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRHKVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRIPATIISRCQRFDFRRVSLEEQTERLDLICQQENIQADLDALQYIARLSDGGMRDAVSVLDQISSFTDGRVTYQQVLDMTGGIASEQFGKLALALLKEDVGTVLQLIENFMQEGKSADKCMENLLYYFRDLLMIKMVPQATKMTERVLNPEQFREVADAFTKEQLFAMIDTLNRYQGEMKYAVQPQTLFEVALLKLCSIPGEAGTAAQPTAQRSGAVAGQEDVAMLKRQLAELEKKLERAMQGGLAVGAGQETPSGGRQASGGRAPAPRLSAPAKLPSQLDRYIAEKSSEAFAAVGRKWSQILQGVKEAKVTVHAWFMDGEPVSVLEDSVLVAFKNNIHRETTEKPANKQVIEKVLHEQLGHPYRLVTMMQKDWNAAIEGVSDQPAEELQLEPEHDAPGKSKEPWIDEAIQLFGEDLVVIKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGB4</accession>
    <name>E3EGB4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pro-sigmaK processing inhibitor BofA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-298</name>
        <name evidence="2" type="ORF">PPSC2_00740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368787.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13730"/>
    <dbReference type="EnsemblBacteria" id="ADO54142">
        <property type="protein sequence ID" value="ADO54142"/>
        <property type="gene ID" value="PPSC2_00740"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00740"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.149"/>
    <dbReference type="eggNOG" id="ENOG502ZH8C">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_190691_0_0_9"/>
    <dbReference type="OMA" id="NYSGWIT"/>
    <dbReference type="OrthoDB" id="2052383at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010001">
        <property type="entry name" value="BofA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07441">
        <property type="entry name" value="BofA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="91" mass="9778" checksum="5B2C55E0995EAB4F" modified="2011-01-11" version="1">MRGVVWLVLIACAGILMYLILKKHLGIGWFVVFGAHMALAAIALYVINYSGWITQVYIPINPVTMGAVTILGLPGIALLLGLKIILFGQAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGD1</accession>
    <name>E3EGD1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Histidine biosynthesis bifunctional protein HisIE</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="15">Phosphoribosyl-AMP cyclohydrolase</fullName>
                <shortName evidence="15">PRA-CH</shortName>
                <ecNumber evidence="15">3.5.4.19</ecNumber>
            </recommendedName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="15">Phosphoribosyl-ATP pyrophosphatase</fullName>
                <shortName evidence="15">PRA-PH</shortName>
                <ecNumber evidence="15">3.6.1.31</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="15 17" type="primary">hisI</name>
        <name evidence="15" type="synonym">hisIE</name>
        <name evidence="17" type="ORF">PPSC2_00880</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>1-(5-phospho-beta-D-ribosyl)-5'-AMP + H2O = 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:20049"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58435"/>
            <dbReference type="ChEBI" id="CHEBI:59457"/>
            <dbReference type="EC" id="3.5.4.19"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 15">
            <text>1-(5-phospho-beta-D-ribosyl)-ATP + H2O = 1-(5-phospho-beta-D-ribosyl)-5'-AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:22828"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:59457"/>
            <dbReference type="ChEBI" id="CHEBI:73183"/>
            <dbReference type="EC" id="3.6.1.31"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5 15">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 2/9.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 15">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 3/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 15">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6 15">In the C-terminal section; belongs to the PRA-PH family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7 15">In the N-terminal section; belongs to the PRA-CH family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.19" evidence="15"/>
    <dbReference type="EC" id="3.6.1.31" evidence="15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368803.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13870"/>
    <dbReference type="EnsemblBacteria" id="ADO54159">
        <property type="protein sequence ID" value="ADO54159"/>
        <property type="gene ID" value="PPSC2_00880"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.164"/>
    <dbReference type="eggNOG" id="COG0139">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0140">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_048577_3_1_9"/>
    <dbReference type="OMA" id="ERSCFHQ"/>
    <dbReference type="OrthoDB" id="1842189at2"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004635">
        <property type="term" value="F:phosphoribosyl-AMP cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004636">
        <property type="term" value="F:phosphoribosyl-ATP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11534">
        <property type="entry name" value="NTP-PPase_HisIE_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01020">
        <property type="entry name" value="HisE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01021">
        <property type="entry name" value="HisI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01019">
        <property type="entry name" value="HisIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023019">
        <property type="entry name" value="His_synth_HisIE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008179">
        <property type="entry name" value="HisE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026660">
        <property type="entry name" value="PRA-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021130">
        <property type="entry name" value="PRib-ATP_PPHydrolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002496">
        <property type="entry name" value="PRib_AMP_CycHydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038019">
        <property type="entry name" value="PRib_AMP_CycHydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01502">
        <property type="entry name" value="PRA-CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01503">
        <property type="entry name" value="PRA-PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141734">
        <property type="entry name" value="SSF141734"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03188">
        <property type="entry name" value="histidine_hisI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 15" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="12 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 15" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="13 15" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="11 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="14 15" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="10 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRA-CH" evidence="16">
        <location>
            <begin position="41"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosyl-AMP cyclohydrolase" evidence="15">
        <location>
            <begin position="1"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosyl-ATP pyrophosphohydrolase" evidence="15">
        <location>
            <begin position="153"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00007731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00008299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF01502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADO54159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="246" mass="27397" checksum="D82EB98A72FA8E27" modified="2011-01-11" version="1">MSNELNQQLSLEQILDNVRWNEAGLVSAIVQDDATLQVLTLAYMNRESLKRSLESGETWFWSRSRQELWHKGATSGNTQKISSIQLDCDGDALLVRVIPSGPACHTGATSCFSRDISVPGTAVTPVAGKAGAQVSVTRTDAIPIASEGRFEVLAQLEAIIKEREETRPEGAYTTYLFDKGVDKILKKVGEEASETIIAAKNKDNEELRLEVSDLIYHLLVLLQERKLPLDDVLAELNRRHERPRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGF4</accession>
    <name>E3EGF4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-334</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-334</name>
        <name evidence="1" type="ORF">PPSC2_00990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368825.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0195"/>
    <dbReference type="EnsemblBacteria" id="ADO54182">
        <property type="protein sequence ID" value="ADO54182"/>
        <property type="gene ID" value="PPSC2_00990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.186"/>
    <dbReference type="eggNOG" id="ENOG50339FB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_112340_0_0_9"/>
    <dbReference type="OrthoDB" id="1455057at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="224" mass="25081" checksum="5B9C06C50468CB8E" modified="2011-01-11" version="1">MNYMDEHILSLKNKLNHDAASNNVNTNLSQADVPGQDNSVAEQNRVLRMGDELIPLEWKTILDGQVAVSIPKLFSLMPLEQAKFKYPSEHRPQVIYTSLEGTVNITFNSTESALEVDELPEFVEQMADVLRSVQPVRNWIGTEMIMNPYGLSIGMIRFVAAGVDTNLYNEMLLFVHEGQVTMGTFNCMESDMEAWLPVAENTVQSLHIVPSPSDSTFEKGVAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGH8</accession>
    <name>E3EGH8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_03235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54617">
        <property type="protein sequence ID" value="ADO54617"/>
        <property type="gene ID" value="PPSC2_03235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.624"/>
    <dbReference type="HOGENOM" id="CLU_2937329_0_0_9"/>
    <dbReference type="OrthoDB" id="1749120at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="60" mass="6709" checksum="67A45837C0E8AA3C" modified="2011-01-11" version="1">MLNVKKQQQSRGWNGVVSALNVLYVGFAQLCHGKAPPEVILLNSYFLQESNSKTMITLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGT2</accession>
    <name>E3EGT2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yvcC1</name>
        <name evidence="10" type="ORF">PPSC2_05730</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369798.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1186"/>
    <dbReference type="EnsemblBacteria" id="ADO55166">
        <property type="protein sequence ID" value="ADO55166"/>
        <property type="gene ID" value="PPSC2_05730"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05730"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1172"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_3_9"/>
    <dbReference type="OMA" id="IMIYLVQ"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="135"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="161"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="23"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="333"/>
            <end position="566"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO55166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="572" mass="63726" checksum="687DF52D21CE9E21" modified="2011-01-11" version="1">MQGKVSQLWALMNRSQMAKGQLVFLFFISLVEVAAGLAVPLLTMKHINQISDAGFAITSLLPVIAILIVQAMLSAIAFYLMRRLGEKVVANLRTEVWEHMLHLRLSYYDAHESGETMSRITQDTNVVKEFVTEQLVSFVSGLFAILGAVVVLLWIDWKMTLLLLIAVPLTIFVTYPLGEKMYAISVENQDELAGFGGRLGRILSNIRLVKASQTEQQELTGGKRQIQQLYKYGLKEAKIVAILSPLMTLLMMVVLIAIFGYGGSQVATGAITSGELVAIMIYLVQIIMPFTQMATFFTNLQKTLGATDRIVEALNVKREVQDGKPVSATPLPIHFQNVSFKYNEKYVLNDMTFTLEPNETTAFVSRSGGGKTTMFSLIERFYDVTSGAILYGNENIEQFNLTEWRGLFGYVSQNAPLLNGTIRDNVMYGTNGASEQEVLAALKAAYAYDFVMQLDKRLDTEVGEGGIKLSGGQKQRIAIARAILRNPRILLLDEATSNLDNESEREVQLALQALTKNRMTIIIAHRLSTITSADQILVFEEGRLSGQGTHEALQKTHPYYQQLWHNGRLTED</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGX8</accession>
    <name>E3EGX8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lantibiotic ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mrsE3</name>
        <name evidence="2" type="ORF">PPSC2_07465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370165.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20440"/>
    <dbReference type="EnsemblBacteria" id="ADO55538">
        <property type="protein sequence ID" value="ADO55538"/>
        <property type="gene ID" value="PPSC2_07465"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07465"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1543"/>
    <dbReference type="eggNOG" id="COG4200">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086622_5_0_9"/>
    <dbReference type="OMA" id="WYSLWTQ"/>
    <dbReference type="OrthoDB" id="1902621at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="216"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="244" mass="27783" checksum="CBF3D9863E8E7083" modified="2011-01-11" version="1">MGSILRVEAMKLQWVMVWILIILDAVINSLMGVLELNDLKQFYEPSWLMLYTYAAHFHSMFFYPLYCGIIASLLCAYEHRDGGWKILLSSPYPRQRIYYAKYILLILILFLDQLTFIVGYFAGGYIAGAPGEIPWTLVLSTGWGGWFGILPLAALQLMLSVKIRNFGASLGMAICCVVPNIVMTGFHSSIGAWFPFTIPYYIMLPQTASYAPRVEPYSLGLIVLFTFLAYLYGGRKMFVNRDWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGY8</accession>
    <name>E3EGY8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">araJ1</name>
        <name evidence="9" type="ORF">PPSC2_07515</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370175.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20485"/>
    <dbReference type="EnsemblBacteria" id="ADO55548">
        <property type="protein sequence ID" value="ADO55548"/>
        <property type="gene ID" value="PPSC2_07515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1553"/>
    <dbReference type="eggNOG" id="COG0738">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055429_1_0_9"/>
    <dbReference type="OMA" id="AHGSYGV"/>
    <dbReference type="OrthoDB" id="1121832at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="110"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="144"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="174"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="216"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="251"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="278"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="305"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="339"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="381"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="15"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO55548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="412" mass="44883" checksum="710E535298821BD4" modified="2011-01-11" version="1">MNPQTRKSRHMYTMQLATIFIGFIVFGISENIKGPAIPRIQFDFNLDEQQLGTLLSLNALGYLIACSFTAVLVRKWGIKAVSIISFASMIISGVFIYLSHTYPFFASSYFLMYIGNGMLEIALAILGARIFVKNTGTMMNLSHFFYGLSSTVAPLLATGVMSLTVFGHTLDWRGMYLAMLSLCLLPIVAALLSTFPGDDLQHEERTSLKTLTRDPALWMMVMILSFGVVSELAVGGWLVNFLEKAYSWSTVKASSMLSAFFLTFSLGRLLLGPLTDRMGFVLSTILFSAFSAICTFAAIAGGERLAFLFATSGAGIAMIYPTVMAFIARRYPKDSDTAITFVVTLMGIGSVIGNYVIGWVIEGVKIVYGATTELGILRGLQAGYGVIGLCAAICAVSGIILYGYLKKRQELI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI01</accession>
    <name>E3EI01_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywrO</name>
        <name evidence="2" type="ORF">PPSC2_11850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371098.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2522"/>
    <dbReference type="EnsemblBacteria" id="ADO56493">
        <property type="protein sequence ID" value="ADO56493"/>
        <property type="gene ID" value="PPSC2_11850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2509"/>
    <dbReference type="eggNOG" id="COG2249">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_058643_0_2_9"/>
    <dbReference type="OMA" id="RYPMSDI"/>
    <dbReference type="OrthoDB" id="1143659at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="172" mass="19783" checksum="BC46DDC16027AE5D" modified="2011-01-11" version="1">MSTLVIVVHPDLAESRINKRWMQELKKQSSVTVHNLYEVYPDEQINVAHEQKLLEQHDRIVLQFPFYWYSSPPLLKKWLDKVLTYGWAYGSEGGKLQGKELLIALSAASVEENYQHGGRNRYTIEELLRPFEATGHMIGVKLLPYFVQYGAATLTDEQLEQSALKYAQAVIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI55</accession>
    <name>E3EI55_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mtaB</name>
        <name evidence="6" type="ORF">PPSC2_03725</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369359.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16540"/>
    <dbReference type="EnsemblBacteria" id="ADO54723">
        <property type="protein sequence ID" value="ADO54723"/>
        <property type="gene ID" value="PPSC2_03725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.733"/>
    <dbReference type="eggNOG" id="COG0789">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060077_0_6_9"/>
    <dbReference type="OMA" id="HAGHRRY"/>
    <dbReference type="OrthoDB" id="1467120at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036244">
        <property type="entry name" value="TipA-like_antibiotic-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012925">
        <property type="entry name" value="TipAS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07739">
        <property type="entry name" value="TipAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89082">
        <property type="entry name" value="SSF89082"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH merR-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="254" mass="29789" checksum="0E82DC13859ED146" modified="2011-01-11" version="1">MAYTVKEVSNLSGISVRTLHYYDEIGLLKPHHIGNNGYRYYEQEQLLRLQQIMVYRELDLPLSEIGNVLEQTKEQKAEVLQVHRANIEAKVFRLHTLLQTIDETVAHLKGEQTMEPEQMYQGFNPEKQEMYERDLTERYGSQVEEKVQESKTATTNWSKEDYLDSQAEADQIHRELAEAMNKGLKHNSVEVQALIRRHLQWVSRFYTPTAEIYSGLGDLYVEHEDFSKMYEGYHPGLAEYLRDGMKELAKRELT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EI67</accession>
    <name>E3EI67_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Levanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sacC3</name>
        <name evidence="9" type="ORF">PPSC2_03775</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369371.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_16590"/>
    <dbReference type="CAZy" id="GH32">
        <property type="family name" value="Glycoside Hydrolase Family 32"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO54734">
        <property type="protein sequence ID" value="ADO54734"/>
        <property type="gene ID" value="PPSC2_03775"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03775"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.744"/>
    <dbReference type="eggNOG" id="COG1621">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_001528_3_2_9"/>
    <dbReference type="OMA" id="GTEWRHA"/>
    <dbReference type="OrthoDB" id="1622507at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32N" evidence="7">
        <location>
            <begin position="64"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="8">
        <location>
            <begin position="392"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO54734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="530" mass="59870" checksum="A2A3A26E2A8311AB" modified="2011-01-11" version="1">MRKKAPKNIWIRSVVVITGLTIFIAMGWNMYQQDAGKPPKPAATPKNQANQSKHTTPTYRAAYHFTVPDKWKNDPQRPIYMDGEYHYYYLYNRDYPHKNGTEWRHATSTDLVHWKDEGVAIPKYTNPNGDPWSGSVVIDDHGTAGFGKGALVAIVTQPSADGGKQEQFLWYSKDKGKTFTSYRNKPVMSNPGTKDFRDPKIVRDTGRNQWVMVMAEGTKIGFYKSKNLKDWQFTSGFQTENIGLVECPDLYQMRADDGTYQWILGASANSKPTGGPNTYAYWTGDFNGEAFLPDRNDPDWLDYGFDWYGAVTFEDGKAKDQYSHRYALAWMNNWDYANNTPTLKEGFNGMDSVVRQIRLKRTSDVGYRLVSQPVPALEQFPVATESLGKIQVDGTHTLPIAGDAYQLEADVSWSTIKNTGLRLRESADGKRHVDVGVSVEGQYSYVNRANTGQPDQSGKYVESKAPFDINKKNVHLKILVDKTSIEVFVDDGEVAYSSLIFPRLEDRGITLFSDGGKAIFNNVVIKHFSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIA9</accession>
    <name>E3EIA9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protein tyrosine phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tysT</name>
        <name evidence="3" type="ORF">PPSC2_05995</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1242"/>
    <dbReference type="EnsemblBacteria" id="ADO55222">
        <property type="protein sequence ID" value="ADO55222"/>
        <property type="gene ID" value="PPSC2_05995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1228"/>
    <dbReference type="eggNOG" id="COG3551">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_651870_0_0_9"/>
    <dbReference type="OMA" id="FATQEMW"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008476">
        <property type="term" value="F:protein-tyrosine sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006478">
        <property type="term" value="P:peptidyl-tyrosine sulfation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026634">
        <property type="entry name" value="TPST"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12788">
        <property type="entry name" value="PTHR12788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="421" mass="48341" checksum="18B8C7700A2ABABD" modified="2011-01-11" version="1">MIEKQGGKLVFLLSVPRSGSSLLTAILQNHSRLFATQEMWFLLSLYDLPQSHARPYGGTGILRQFFKGMVPPQVLEQASRSYALEIYNGLLEGTTADMLIDKSPRYYTVLEFLDRLFPAARRVWLIRNPLAIVASFKKVNQLRGGHFHLLKELGSPHFNMKMTDITVGLFRYAHYFATPHPLAYPLMYEQLVANPRMEIEKLCHFLGIHYESGMERYGNFANTPQSSLFYSMGAGDPFVMEHEQAHQNSVHSWQHLLSTLEIELYCRSIGARLFRQLGYGEALEQAEQMTGVRFEDDPDVALLSRRTHQFLQQSGFEWKAAYRMLEEHDADNRVFMTNATRHAAPHNLARMDISQVVSDRRIQSLENRLAHSFEERNRLIEQLQSYQRPSQGIGSRLFARKLGRWASVVLSSIGKEKGGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIB3</accession>
    <name>E3EIB3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Metallophosphoesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369858.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18975"/>
    <dbReference type="EnsemblBacteria" id="ADO55226">
        <property type="protein sequence ID" value="ADO55226"/>
        <property type="gene ID" value="PPSC2_06010"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06010"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1232"/>
    <dbReference type="eggNOG" id="ENOG5033BC0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_159325_2_0_9"/>
    <dbReference type="OMA" id="TSCENIC"/>
    <dbReference type="OrthoDB" id="2098474at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008792">
        <property type="entry name" value="PQQD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041881">
        <property type="entry name" value="PqqD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05402">
        <property type="entry name" value="PqqD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11477" checksum="84382DC603E77018" modified="2011-01-11" version="1">MAATNPAKDHYRVTYGEEVYVSDMDGEKVMMSIHTGKYYNLGFTGGRIWELAESSPSLGDIVTVLMNEYEVDEEQCRQQVHTFVAELEREGLLRLLRELD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIB5</accession>
    <name>E3EIB5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_06020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369860.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18985"/>
    <dbReference type="EnsemblBacteria" id="ADO55228">
        <property type="protein sequence ID" value="ADO55228"/>
        <property type="gene ID" value="PPSC2_06020"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06020"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1234"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036186_1_0_9"/>
    <dbReference type="OMA" id="WKDHHAS"/>
    <dbReference type="OrthoDB" id="1536506at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039498">
        <property type="entry name" value="NTP_transf_5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14907">
        <property type="entry name" value="NTP_transf_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="508" mass="56778" checksum="A3981F1AC19664EC" modified="2011-01-11" version="1">MTTKSILELANWNEDQEFTLLLSLLRKDVNLWQDTTTAFQLQEMDWSRLLRLIEHHRVVPTVYLQLKTLNHPFIPAELLRNLQAQYQRNTLRMLQLQAEAERLTRLLTAHGIRVLMLKGPALAQQLYGDVSLRTSKDIDLLIAPDDMDEAEHWMEEAGYASKSGEVRVLGSWKWKDHHASFLHLQKRVEIELHWRLHPDGGREPSFDELWDCRQMGKAAGVRASQMAPATSADNRNVMTSCMYTLGSEHQFLYLSAHGARHGWFRLRWLVDIDRLAVRAVNWGALLPLMRRYGGLPAGGQAWALAAALLGTPIPEPMRPISATRQAHRLALSALAFMQASVPAPYPVANRAGTGRLVRSELLPSVALTESMNTAPLSGGISASGAAGEAVLYAVKDAADIPKDASSILSDPVNTVNTAVSSLSKPVGATTVAPSPAIAGATTTAFTPQPVSRAYLLSLKEPRHRLWYLISRLFPSTRDSVVFPLPRQLHFLYIPLRPFLWLKRRFTKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIE7</accession>
    <name>E3EIE7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gbpD</name>
        <name evidence="4" type="ORF">PPSC2_06160</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369891.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19120"/>
    <dbReference type="EnsemblBacteria" id="ADO55260">
        <property type="protein sequence ID" value="ADO55260"/>
        <property type="gene ID" value="PPSC2_06160"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06160"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1268"/>
    <dbReference type="eggNOG" id="COG4099">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_035499_2_0_9"/>
    <dbReference type="OMA" id="SWIYVYN"/>
    <dbReference type="OrthoDB" id="1195966at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041172">
        <property type="entry name" value="EstA_Ig-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001375">
        <property type="entry name" value="Peptidase_S9"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18435">
        <property type="entry name" value="EstA_Ig_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00326">
        <property type="entry name" value="Peptidase_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168231" evidence="1">
        <location>
            <begin position="32"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="domain" description="EstA_Ig_like" evidence="3">
        <location>
            <begin position="41"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S9" evidence="2">
        <location>
            <begin position="287"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO55260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="443" mass="48841" checksum="E5B2597F2452482B" modified="2011-01-11" version="1">MFKQFKKVAKTTMLFTLAVGTTLVFSNGAWAAKDAKMQPTSYRTVAEVKDWGATITKIIVNLGKPVPKDAITKDTFKVYVERSDNRLVNSFVEKGNRKVTKAYVSDKSGNPVSKTGSYVVLEMEIGPAVTLSSAIHYDAAGSGFNAWNDNKYTITQQKTIKTKSGTISGLKIDTSAGEIRQLVDQFTTGKATSDGVTLTYASYAPAKDKVKNPLVIWLHGMGEGGTDPTIPISGNKAANFASKDIQSYFGGAYVLAPQTPTYWMDGFTGFGDGTSKYEQALMSLIKEYVAKNKDIDTDRIYIGGDSNGGYMTMLLIRDYKDYFAAAVVACEALKDSLITDEQINDMKDLPIWFVAAQTDTVVPPNDYMIPTYNRLVNAGAKDVHMSLFDNVVDTSGLYKKSDKTPYEYNGHWSWIYVYNNEVSKVINGKKTTMMQWLASKTLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG0</accession>
    <name>E3EIG0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycine/betaine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PPSC2_06215</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369904.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19170"/>
    <dbReference type="EnsemblBacteria" id="ADO55273">
        <property type="protein sequence ID" value="ADO55273"/>
        <property type="gene ID" value="PPSC2_06215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1281"/>
    <dbReference type="eggNOG" id="COG2113">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4176">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008673_2_0_9"/>
    <dbReference type="OMA" id="SPHWAYS"/>
    <dbReference type="OrthoDB" id="485527at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007210">
        <property type="entry name" value="ABC_Gly_betaine_transp_sub-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04069">
        <property type="entry name" value="OpuAC"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="50"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="91"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="135"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="250"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="287"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="88"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="864" mass="93676" checksum="1E1948325231DEF5" modified="2011-01-11" version="1">MIPKLPIAEWIQSIVDWMGIHLAGLFNVISSVIEAVVGFFSGLFMLPHPLVFIVIIGIIAFMIGRVQLTLFTVIGFLLIDNLGYWSETMNTLGLVITSALVSIVIGIPIGIWCAYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSLGVVPGVIASVIFAIPPTIRMTNLGIMQVSDELVEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLSMVVIASMIGAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNLFKPTKKSKSRVSSKQKVWITSAVTAVILIAGASQYFVGTDHSAAGKGSAAANPIGAEVDYRIIGIDAGAGIMKSTAKAIQDYNLSDWKLVEGSGAAMTATLDKAIKAKKPIIITGWTPHWMFNKYDLKYLEDPKKSYGEAEGIHTIARKGLQQDAPTAYEFLKRFKWTAEDMGEMMVAIQGGTSPEQAAKDWAEKHADKVQEWTQGLQTVNGDTFKLSYVAWDSEIASTNLLKYIMENKLGYKVTALQVEAGPMWTGVASGDVDASPAAWLPLTHADYWTKYKDKLDDLGANMTGVKTGLVVPAYMNVKSITELQGNGAEAAPASAATGDFGKEVGYRIVGTDPGAGLMKLTAKAISDYGLSDWKLLESSGAAMTATLDKAIKAKQPIVVTGWTPHWMFNKYDLKYLKDPKKAYGDKEEIHTIARKGLKQDAPVAYEFLSRFKWTAEDMGEVMIAIQDGTPPQQAAKNWADKYPDKVQEWIKGLQPVNGDPLKLSYAAWDSEIASTNVLKYVLEQKLGYKVTALQVEIGPMWTGVAGGSVDATAAAWLPLTHADYWAQYKDKVNDIGTSMTGVMSGLVVPSYVPIDSIEDLKTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIJ6</accession>
    <name>E3EIJ6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370261.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1658"/>
    <dbReference type="EnsemblBacteria" id="ADO55634">
        <property type="protein sequence ID" value="ADO55634"/>
        <property type="gene ID" value="PPSC2_07860"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07860"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1641"/>
    <dbReference type="HOGENOM" id="CLU_2303134_0_0_9"/>
    <dbReference type="OrthoDB" id="2061440at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="100" mass="11993" checksum="0A5C2DAB1399E3F3" modified="2011-01-11" version="1">MIIGKLLLDEFEIDCDYVTGNCTIEGHESKTHVWLEYEGYKIDITADQFRDLFRITEEIVVSANHELYKYFEVKETRKISEHFPNELRTPYILIRDLIYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIU3</accession>
    <name>E3EIU3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_09390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55962.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599648.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1990"/>
    <dbReference type="EnsemblBacteria" id="ADO55962">
        <property type="protein sequence ID" value="ADO55962"/>
        <property type="gene ID" value="PPSC2_09390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09390"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1979"/>
    <dbReference type="eggNOG" id="COG0747">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_086008_0_0_9"/>
    <dbReference type="OrthoDB" id="1063332at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036582">
        <property type="entry name" value="Mao_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169270" evidence="1">
        <location>
            <begin position="24"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="21"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="44"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55962.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="282" mass="31559" checksum="BCDE260C03F331AE" modified="2015-05-27" version="2">MNKAFFGAFLAIFLCISSSTAYAAQNQIKIDGVAIATDAKPQMKNKRTMVPLRVISESLGANVEWSDSEVILTKSDMKVKLAVNKSTAEKNGQKIQLDVKPYLKNNNIYVPLRFIAETFGCNVNYSNFAVTINIEPLLIDGVQVKALQQEYHMIMGGVVQQIHGNAYNKAIYNIFAKNKGEKVEAPENYSWRLTIDTPGSYYKNAQYDFLDQKGKSLARFDVYSLIQSFPSEVLIGYPKFLIHDVSKDEWYLFSDSAAKSINQLINNATNNGFMTVISNTVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJ40</accession>
    <name>E3EJ40_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">vanT</name>
        <name evidence="4" type="ORF">PPSC2_10580</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the acyltransferase 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370827.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22975"/>
    <dbReference type="EnsemblBacteria" id="ADO56221">
        <property type="protein sequence ID" value="ADO56221"/>
        <property type="gene ID" value="PPSC2_10580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2236"/>
    <dbReference type="eggNOG" id="COG1835">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047714_1_3_9"/>
    <dbReference type="OMA" id="AFCTINC"/>
    <dbReference type="OrthoDB" id="1979131at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="43"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="125"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="163"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="206"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="235"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="276"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="307"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="344"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="3">
        <location>
            <begin position="12"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="390" mass="44320" checksum="0C91AA57B057E0BF" modified="2011-01-11" version="1">MSQKERISEVALLRGLAFAAVVLQHSVAHYAVASGARIQDGVVMTLLLLCSKFAVPVFVFITGMVLFYNYDGALKYGTFLRKRFMDIIVPYIIWSLLYELGNQLAQGGGFIHPLDFFQKLLNGKSSYHLWYIIMIIQCYVLFPVFRYAVRRLSALLPSTWRPAALAGFGVLYILLMLAVGPVYQAMDQLQLPVISSWFTIYADRNVIYFFFYFILGAAAGVNVKRWNAWVIKAQLIYWPLFIVITGYLLYEMIGQFQTPRGTVLSFNYLSLLRPVMAVYCITSIFVAYRVATWIAHKGGRAARMLTVMGTLSYGAYLMHAFMLRVTYYFDGTLFTDWSHVLRTLASFVLCIIFSLVGTWLLAHLPLGKWIVGLRIRPRPAGSPPAFQKQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK25</accession>
    <name>E3EK25_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386148.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0343"/>
    <dbReference type="EnsemblBacteria" id="ADO59734">
        <property type="protein sequence ID" value="ADO59734"/>
        <property type="gene ID" value="PPSC2_26500"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26500"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5588"/>
    <dbReference type="HOGENOM" id="CLU_2918388_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="61" mass="6791" checksum="D3E1BC9DFD867AA3" modified="2011-01-11" version="1">MNRDILNDFIVQSNLKKQNVCSALKDVIVIDPEGEYNMLKKAEGECDIIITPYGNSGGDFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKC3</accession>
    <name>E3EKC3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Methylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_27810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385864.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0056"/>
    <dbReference type="EnsemblBacteria" id="ADO59450">
        <property type="protein sequence ID" value="ADO59450"/>
        <property type="gene ID" value="PPSC2_27810"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5894"/>
    <dbReference type="eggNOG" id="COG0286">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_064056_0_0_9"/>
    <dbReference type="OMA" id="KESYQAS"/>
    <dbReference type="OrthoDB" id="1547743at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="220" mass="25969" checksum="FCD677DC0D72D6CD" modified="2011-01-11" version="1">MDINKLLGIHDSKQAPAQMMKILYDRKKREELFVKFLEAFNFNLSYDWFHDYFQEELADRKWLKQDFTPMCVAELLAKITGGDKRSTYEGGTGTGGVMIRKWQEERERRSIFKYKPSDYLYVCEELSDKAIPFLLFNTLIRGMNAIIIHGDLLSQDCYGVFFVQNDKDDYMGFSSLNVMPYSQEVADFWEINFVEECYPKWIESKVFPSHLGVYRTREAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKE3</accession>
    <name>E3EKE3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385884.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0076"/>
    <dbReference type="EnsemblBacteria" id="ADO59470">
        <property type="protein sequence ID" value="ADO59470"/>
        <property type="gene ID" value="PPSC2_27715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5873"/>
    <dbReference type="HOGENOM" id="CLU_820949_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="338" mass="37951" checksum="A7B508894E7A52D3" modified="2011-01-11" version="1">MFKRIKKIRDEKGFVSVFVIFAVSFILPFFIFHTIEMTYLYGMKDKFQNFNDAAASAGAMQLEKKVVSKGDLKFHEDEVKNVVKRILSENYGLDAHLNPQENSYITDVPNVKVSIVNQESDLPKELLTQEGFKFEIKHPTIIVYTEVKPKGIFFNKFITIKSISALEVSFKTGGRTELTNNPQPSKDGLIFTMNKVVNPLHFPKNTKLVPMNWSWTNMPMAAGGDIEFSVTNTNSNVQLKAASYELRLKGMDYERVLIGSMTRSSDSKLTGALTLPEDAPIGTTVTLSFKNSNIIVSGISGEETKGNRALDFSDDGEILGEIDANVFELIRFTKIYPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC06</accession>
    <name>A0A0D5ZC06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNAase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_21070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44310">
        <property type="protein sequence ID" value="AKA44310"/>
        <property type="gene ID" value="PPSC2_21070"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21070"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4480"/>
    <dbReference type="HOGENOM" id="CLU_136726_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045532">
        <property type="entry name" value="DUF6467"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20071">
        <property type="entry name" value="DUF6467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="109" mass="11625" checksum="EBC35393A491C62E" modified="2015-05-27" version="1">MVGNHSKSAKAEGSLTARPTSRAGTKVGLSDPVVPHGRAIAQRIKATLGITGLSPPRVHIDGEVWHLDVGSSHPGAEVGPKGWAVRPLKRYASWVQNVVRQFGPYLSWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZC69</accession>
    <name>A0A0D5ZC69_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44238">
        <property type="protein sequence ID" value="AKA44238"/>
        <property type="gene ID" value="PPSC2_11995"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11995"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2537"/>
    <dbReference type="HOGENOM" id="CLU_2684406_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8675" checksum="02EEDF0E8E414567" modified="2015-05-27" version="1">MKFTGNFLLPLCISDLTARLRRSKFGFVLKKIMLNFSHKINRLSEVSYSAGTIYGEYKGFKQRKGSDLKKKRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCF7</accession>
    <name>A0A0D5ZCF7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_13390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885981.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44256">
        <property type="protein sequence ID" value="AKA44256"/>
        <property type="gene ID" value="PPSC2_13390"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13390"/>
    <dbReference type="HOGENOM" id="CLU_119880_0_0_9"/>
    <dbReference type="OrthoDB" id="1923138at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009372">
        <property type="term" value="P:quorum sensing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006741">
        <property type="entry name" value="AgrB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04647">
        <property type="entry name" value="AgrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00793">
        <property type="entry name" value="AgrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0673">Quorum sensing</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="79"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="103"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="137"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AKA44256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="182" mass="20563" checksum="7F966E949C4329CC" modified="2015-05-27" version="1">MLETLSRHIASEIKKADPDGPTSVEVMEYAIGIKITEISAVLMVAVIAWITGHFWGALLALATIMFVRRFSGGVHFSNLTLCVCFTTAICVTIPFVSLGLSTILIINACSLLVFVVYAPNHFIYINKTKYHKYYKTICILVCILNFFVQSHIICLSIVIQAFSILPLWKGGERKWIRNWREF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2022-08-03" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCK3</accession>
    <name>A0A0D5ZCK3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pmxB</name>
        <name evidence="7" type="ORF">PPSC2_22075</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_045905793.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44314">
        <property type="protein sequence ID" value="AKA44314"/>
        <property type="gene ID" value="PPSC2_22075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4698"/>
    <dbReference type="HOGENOM" id="CLU_000022_2_13_9"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043604">
        <property type="term" value="P:amide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901566">
        <property type="term" value="P:organonitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044550">
        <property type="term" value="P:secondary metabolite biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010071">
        <property type="entry name" value="AA_adenyl_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020802">
        <property type="entry name" value="PKS_thioesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001031">
        <property type="entry name" value="Thioesterase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00975">
        <property type="entry name" value="Thioesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00824">
        <property type="entry name" value="PKS_TE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="6">
        <location>
            <begin position="778"/>
            <end position="853"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="5">
        <location>
            <position position="813"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="AKA44314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="1102" mass="123188" checksum="CCC5575B1482EE8E" modified="2015-05-27" version="1">MKSLFEKEERYWSGKFDADDSLSFLPYSQSSKLSADGEAAAEPGLLHRTLPSELSERIICLANGSDLALYMIVLAGVKSLLFKYTGRDQVLIGMPSYSADPDGTPPPHDILVIKTSVSRQTTLKTLLGGIKASIGEALEHQHLPFRKMVEPLHLDYTGDGLPVVNTVASFAPIHPEPLVNRVAADTVFRFDRQNHSIELEISFDGQRYERAFVEQAADHLVRLLSVLLFQPDLELGQADVLSPDERETLLKRFNDTETEFERGKTIYGLFEEQAELYPDNVAAVMNERQLTYRELNERSNRLARKLRETGVEADQLVAILAERSLDMVVGILAILKAGGAYVPVDPDYPEERIRFMIEDSGAPLLLIQKHLHEKTNFAGTRLELDDFVWGDRGADSADALDASNLEPISGPGNLAYVIYTSGTTGRPKGTLIEHKNVVRLLFNDKNLFDFGPSDTWTLFHSFCFDFSVWEMYGALLNGGKLVIVPPLTAKNPADFLALLGREQVTILNQTPTYFYQLLRKVLADHPYDLRIRNVIFGGEALSPLLLKGFKTKYPETKLINMYGITETTVHVTYKEITWVEMEAAKSNIGKPIPTLRVYVLDENRRPVPIGVAGEMYVAGEGLARGYLNRPDLTAEKFVDSPFAEGEKLYRSGDLAAWLPDGNIEYLGRIDHQVKIRGYRIELDEIETQLLKIAAVQEAKVLDRDDANGHKQLVAYYVAETRLAANELKEELAKQLPGYMIPSHLVQLSGMPLTPNGKIDRKALPAPEEAAAGGAEYVAPRTLLEMKIARVWQDTLGVPQVGVKDNFFELGGNSLSLMRLVQAVYDETGIEIPLNRQFHNVTVEAMAFGESDLGLDKGGNSFIKLNKAGDLNVFCFPPGSGFGIGYRELASRLDGRFVLYGIDFIDDAVDYEAMLNRYVDEIVRIQSEGPYVLLGYCFGGNLTFEVAKTMEKRGYSVTDVLMVDSWIKDALTPSETSEKELEEMLADFDEEEKELMSNPLVRERVHRKVKATLAYEAQLINSGTIPARIYELIAKDSEAFRLEHQLPSWRGATTQAYSDYRLEGAHEELLELARVEETAVVIRDILEQVKRQIEAEAGVLHGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4K8</accession>
    <name>E3E4K8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_13790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371509.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56907">
        <property type="protein sequence ID" value="ADO56907"/>
        <property type="gene ID" value="PPSC2_13790"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13790"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2939"/>
    <dbReference type="HOGENOM" id="CLU_2143391_0_0_9"/>
    <dbReference type="OMA" id="KINWIID"/>
    <dbReference type="OrthoDB" id="1737895at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="106" mass="12897" checksum="B5DBA2F7CEEFB4D6" modified="2011-01-11" version="1">MAFEGYGEDKREHWFDWPFPLSVSILYVDADVDEAETKWYLIDEQEKYLIRIRDEKQIELLHHCMYGVLLNDEKINWIIDKNGGRFTYHDSVQDFINFQKEYLDTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4P8</accession>
    <name>E3E4P8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multi-tm2 domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_14350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371625.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02010"/>
    <dbReference type="EnsemblBacteria" id="ADO57026">
        <property type="protein sequence ID" value="ADO57026"/>
        <property type="gene ID" value="PPSC2_14350"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14350"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3063"/>
    <dbReference type="eggNOG" id="ENOG50331RK">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_053323_0_0_9"/>
    <dbReference type="OMA" id="KANAFVY"/>
    <dbReference type="OrthoDB" id="1328867at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="191"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="266"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="290"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="352"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="390"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="421" mass="46920" checksum="98DEE76D79596186" modified="2011-01-11" version="1">MAYTERSKLLAFLLNIIPGVGHYYWTRKANAFVYTILFFGCLAGGIFFSVVASDGTPFLVSIFIAALLWGLSMLHIVISLLRYDPRAVAAPYPPHAGPNPYGFYSQSGPYGQADLTGEVPEGATDTGTNAPGAGMGYAPGYNHYQQGHYGMAGSPAFQKGSDNERFFTILLSFIPGLGHLHLGLMQRGLSFLLSFFGFGAILVFITSITNESGFLAFAGVLPIIWLYCMFDAVQHVHRKQAGDILQDRTLFEELEYGRVEGRRSKMLATILSVFPGAGHMYIGLQKRGLQLMLLFLGFIYILDVLHLSLFLFLIPVVWFYSFFDALQQVSRYGQEQLIDKPVIGMFAQYHRWVGLGLLLLGAYYILINVLVPTLDRLFPDGQIYNIVDMYLRTIIVSFLLIGGGVWMMIGNSKSKRAKEKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="76" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Q2</accession>
    <name>E3E4Q2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Asparagine--tRNA ligase</fullName>
            <ecNumber evidence="6">6.1.1.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Asparaginyl-tRNA synthetase</fullName>
            <shortName evidence="6">AsnRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">asnS</name>
        <name evidence="8" type="ORF">PPSC2_14370</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + H(+) + L-asparaginyl-tRNA(Asn)</text>
            <dbReference type="Rhea" id="RHEA:11180"/>
            <dbReference type="Rhea" id="RHEA-COMP:9659"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58048"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.22"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.22" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371629.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02030"/>
    <dbReference type="EnsemblBacteria" id="ADO57030">
        <property type="protein sequence ID" value="ADO57030"/>
        <property type="gene ID" value="PPSC2_14370"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14370"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3067"/>
    <dbReference type="eggNOG" id="COG0017">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004553_2_0_9"/>
    <dbReference type="OMA" id="DNMDLAE"/>
    <dbReference type="OrthoDB" id="1138123at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004816">
        <property type="term" value="F:asparagine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006421">
        <property type="term" value="P:asparaginyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00534">
        <property type="entry name" value="Asn_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004522">
        <property type="entry name" value="Asn-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00457">
        <property type="entry name" value="asnS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 6 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="7">
        <location>
            <begin position="134"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO57030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="431" mass="49136" checksum="16C6740F17FBB563" modified="2011-01-11" version="1">MTNKSTIAQVGRHVGETVTIGAWVNNKRSSGKIQFLQLRDGSGYIQGVIVKSEVSEDIWNDAKSLTQESSLYVTGIVREEPRSQSGYELTVTGIEIIHLTENYPITPKEHGVDFLMDHRHLWLRSAKQRAVLIIRAEIIRAIQEFFNGNGFTKVDPPILTPSSAEGTTELFHIKYFDEDAYLTQSGQLYMEAAAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEESLRVQEQFVSHIVQSVLKNCAKELEAIGRDVSKLEQIQGEFPRITYDEAIAFLQGEGFDIPWGEDFGAPHETAIAERYNKPVFITHWPTHIKAFYMKPDPARPEVVLCADMIAPEGYGEIIGGSQRIDDPALMEERFNEHNLAREAYQWYMDLRTYGSVPHSGFGLGLERTVAWICGLDHVRETIPFPRMLYRLYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Q7</accession>
    <name>E3E4Q7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_14395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371634.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3075"/>
    <dbReference type="EnsemblBacteria" id="ADO57035">
        <property type="protein sequence ID" value="ADO57035"/>
        <property type="gene ID" value="PPSC2_14395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3073"/>
    <dbReference type="eggNOG" id="ENOG5031089">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_089629_0_0_9"/>
    <dbReference type="OMA" id="IDNANIF"/>
    <dbReference type="OrthoDB" id="1347131at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="267" mass="30141" checksum="D29C568A28CF7A6F" modified="2011-01-11" version="1">MIQAVNYIRPLIGWSLPHLMECSDGNLYVVKLSSNPQGVRALANEMISCWIAKRLNLPVPDSQVIYIHDTLRIQYLNLGYNLGHGPHFGSRYVPDCTHQPTDVELAGCINITQAADMIAFDHWLDNNDRYLWQESGQNILVSRGEFPKLWMIDNANIFSGPNWTVQSMLSSVSMHRTFWGPLYAKFVPFLDGPDPFGKAIANIKALPIGDLLEVMAVMPIEWGVTHEEITAVSYALNSRNKNLPYWLSLLQANFPVWKGHSEGCDKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4W3</accession>
    <name>E3E4W3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rbsB5</name>
        <name evidence="4" type="ORF">PPSC2_14665</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371688.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02310"/>
    <dbReference type="EnsemblBacteria" id="ADO57091">
        <property type="protein sequence ID" value="ADO57091"/>
        <property type="gene ID" value="PPSC2_14665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3129"/>
    <dbReference type="eggNOG" id="COG1879">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_4_0_9"/>
    <dbReference type="OMA" id="MQMSIGT"/>
    <dbReference type="OrthoDB" id="1378040at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005673329" evidence="2">
        <location>
            <begin position="32"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="3">
        <location>
            <begin position="64"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="371" mass="40508" checksum="293C6AFABF45B8D9" modified="2011-01-11" version="1">MYIQKGLQKNKKLGLGAIMLLVLILLVTACGAPKTESGAQGTSTAGTNTGDGKTDSSNLKGKRVALIMEFNTGTFSQQYVQGVEDEVKKFGGTLTKFVANNDKAKMASLLDSAINQQFDVILTDHGDALLEPGLKKAISRNIPVIVFDAAVNVPGAVVLSQDDQSMAELTLEQMKKDIGGKGNIVKVWVAGFAPMERRQVAYDAFLKSNPDIKEIATFGSAQNPALDTQAKMEAVLKQYPKGEITAVWAAWDEFAKGAARAIQQAGRTEIKVYGIDMSDEDLQMIQDPKNPWVASAAVDPTDIGRVQVCYAYQKLHGDNPEEKVVLKAVYVQREDLPDKQISTSELSQYVKGWGKSEQGYKDWMKEYETSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="73" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y9</accession>
    <name>E3E4Y9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Aspartokinase</fullName>
            <ecNumber evidence="15">2.7.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="primary">lysC</name>
        <name evidence="18" type="ORF">PPSC2_15155</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 19">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the phosphorylation of the beta-carboxyl group of aspartic acid with ATP to yield 4-phospho-L-aspartate, which is involved in the branched biosynthetic pathway leading to the biosynthesis of amino acids threonine, isoleucine and methionine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>ATP + L-aspartate = 4-phospho-L-aspartate + ADP</text>
            <dbReference type="Rhea" id="RHEA:23776"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57535"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 16">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 16">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 1/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5 16">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 1/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 15">Belongs to the aspartokinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.4" evidence="15"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371788.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02775"/>
    <dbReference type="EnsemblBacteria" id="ADO57197">
        <property type="protein sequence ID" value="ADO57197"/>
        <property type="gene ID" value="PPSC2_15155"/>
    </dbReference>
    <dbReference type="GeneID" id="66576953"/>
    <dbReference type="KEGG" id="ppm:PPSC2_15155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3235"/>
    <dbReference type="eggNOG" id="COG0527">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009116_3_2_9"/>
    <dbReference type="OMA" id="IIQSQRC"/>
    <dbReference type="OrthoDB" id="1067792at2"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00015"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00461"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004072">
        <property type="term" value="F:aspartate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04261">
        <property type="entry name" value="AAK_AKii-LysC-BS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041740">
        <property type="entry name" value="AKii-LysC-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005260">
        <property type="entry name" value="Asp_kin_monofn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001341">
        <property type="entry name" value="Asp_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018042">
        <property type="entry name" value="Aspartate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027795">
        <property type="entry name" value="CASTOR_ACT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13840">
        <property type="entry name" value="ACT_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000726">
        <property type="entry name" value="Asp_kin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00656">
        <property type="entry name" value="asp_kin_monofn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00657">
        <property type="entry name" value="asp_kinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00324">
        <property type="entry name" value="ASPARTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 16" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="11 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="10 15 18" id="KW-0418">Kinase</keyword>
    <keyword evidence="13" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="9 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACT" evidence="17">
        <location>
            <begin position="264"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="17">
        <location>
            <begin position="344"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="7"/>
            <end position="10"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="173"/>
            <end position="174"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="179"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00010122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR000726-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU004249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ADO57197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="417" mass="44649" checksum="D1DC4DDF145DBE34" modified="2011-01-11" version="1">MSLYVMKFGGSSVGDTERMKRVAKRVVEKQSEGHQCVVVVSAMGDTTDELIDQAKLLNEQLPARELDMLMTTGEQISIALLSMAIQQLGHEAVSFTGWQAGFRTESDFGRARITDIQPQRVLDALSSNKIVVVAGFQGMSADGDITTLGRGGSDTTAVALAAAIQADACEIYTDVDGIYSTDPRIVKVARKLKEISYDEMLELANLGAAVLHPRAVEYAKHNRVPLIVRSSFNHNEGTVVKEDAVMEQGVVVSGIAYDKNVARISILGVADIPGVLAKVFGTLAAAKIDVDIIVQSGVEAGKADFSFTVALTDREAALKTLEGIRGELPYREVTSEENLVKVSIVGAGMVSHPGVAAQMFAVLAEQGVSIKMVSTSEIKVSCVIEAGKLHEVIQALHTAYNLDTEEQAFVGGPKDRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Z6</accession>
    <name>E3E4Z6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Patatin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PPSC2_15190</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371795.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02810"/>
    <dbReference type="EnsemblBacteria" id="ADO57204">
        <property type="protein sequence ID" value="ADO57204"/>
        <property type="gene ID" value="PPSC2_15190"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15190"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3243"/>
    <dbReference type="eggNOG" id="COG1752">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_047251_3_0_9"/>
    <dbReference type="OMA" id="HFVKDEI"/>
    <dbReference type="OrthoDB" id="373926at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1 2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="5"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXGXXG" evidence="2">
        <location>
            <begin position="9"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="2">
        <location>
            <begin position="36"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="DGA/G" evidence="2">
        <location>
            <begin position="193"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO57204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="329" mass="36521" checksum="1566902BFF3C1C65" modified="2011-01-11" version="1">MLINAVFQGGGVKGISLAGAVKAAEDHDIVFNRLAGTSSGAIVAALLAAGYTADEMKAVIEKTPLVKLLRRSPVFNIKWVGPAARIFLKKGLYSGEALEHWVRELLRAKGVRTFADLPPGKLRIIASDITNGRILVLPEDIKRFGINPSSLEVAKAIRMSTSIPYFFDPVMLRLDSALAKGKTFSQQFVFVVDGALLSNLPLWLFDEPVNEREAKTIPTVGFQMVGKTGTETKVSYIRGPLTMLQAIFDTMLSAHDERYIEQENRYRTIKIPTLGIRTAQFSISLEQSDLLYASGVQAGEAFFHKWSITSYQQQYSKYQLMKDTMYAMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E522</accession>
    <name>E3E522_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mviM3</name>
        <name evidence="2" type="ORF">PPSC2_15305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371820.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02930"/>
    <dbReference type="EnsemblBacteria" id="ADO57230">
        <property type="protein sequence ID" value="ADO57230"/>
        <property type="gene ID" value="PPSC2_15305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3270"/>
    <dbReference type="eggNOG" id="COG0673">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023194_23_0_9"/>
    <dbReference type="OMA" id="HPRELIL"/>
    <dbReference type="OrthoDB" id="1465613at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="8"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="34815" checksum="DB9D448F3E378942" modified="2011-01-11" version="1">MDKQIKTRVAIAGLGGIARKVYLPLLAAHQGVDIVGVMNRSQEPVSSTMEQYRLPRGTTDVKEMLAWEPEAVFIHAATEAHFDLVMACIEKGIAVYVDKPLSYDVRQNLEMTAFAEAQAVLLAVGFNRRFAPHYVAAKAWLEEVGGFSQCAAIKHRTGYDRRPATQTVYDDLIHMLDLLLWLGGDNYELLHSSLDTTSEGYMDAAFGTLRLGNAAGTYSMSRQAGADIEKLELHGAGRSVEVTNMEQAIFMQKNNLSRTQTFGSWETILERRGFTGVVNHFLEHIHRPEECAIQAGKVLESHMLAEELISGLSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E544</accession>
    <name>E3E544_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">prkC</name>
        <name evidence="11" type="ORF">PPSC2_15415</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371842.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03065"/>
    <dbReference type="EnsemblBacteria" id="ADO57252">
        <property type="protein sequence ID" value="ADO57252"/>
        <property type="gene ID" value="PPSC2_15415"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15415"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3294"/>
    <dbReference type="eggNOG" id="COG0515">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000288_135_2_9"/>
    <dbReference type="OMA" id="DPDYRYQ"/>
    <dbReference type="OrthoDB" id="1377603at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005543">
        <property type="entry name" value="PASTA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03793">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00740">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51178">
        <property type="entry name" value="PASTA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="334"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="10"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="PASTA" evidence="10">
        <location>
            <begin position="360"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="domain" description="PASTA" evidence="10">
        <location>
            <begin position="429"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="domain" description="PASTA" evidence="10">
        <location>
            <begin position="499"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="296"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="659"/>
            <end position="757"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="300"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="660"/>
            <end position="710"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="741"/>
            <end position="757"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO57252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="757" mass="82853" checksum="033476A6504F4658" modified="2011-01-11" version="1">MIGHLLGGRYEIIERIGGGGMALVYKAQDILLNRNVAVKVLRQQFVHDEEFIRRFRREAQSAASLSHSNVVSIYDVGQEDEIHYIVMECVEGKNLNEIIKERAPLQVDEAVRIASQICDALEHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEHAKGVITGEKSDLYSLGIVLYQMLTAQLPFLGESPISVALKHLQEEFEEPRKINPLIPQSVENVILKSMRKNPEERYQSADEMLRDLETCLLPGRRNESKLEFTHLDDEDQTRVIPAIKPQQLGVSSSGDDVPVQPRESEQLPSKQSSKKNRKKTIFWVTLVLVLLLCMGGVVYYVQSVLVVADVKVPSVLTQTEDQAKVTLSKAGLVIDDPIQHEYKEGIAPGVVFYQSYPEGSLVKEGTEISLKVGIAKPLTPMPDVKGQSYENAVKLLTAQQIKETQIQQNEQFSDQAEGTVLSQTPAANEPFDKDSVQVVLTVSKGADTVKMPSLVGKTQNQAENEVKKAGLKVGSIKEEFSYEQEKGRVTKQWPSEAGSELPPNTEITFYVSTGYPPEAITLPFNVPVAPKEEGKNSKIRITYTDARGENQEWGSRTINTTQTFTINLLMAPNKDSVVSVFRDGAFVDTYPVSYIDAKNGTVTMPQIAPPAGTSPTDSSGGTFSQNGNGEEGNSGESSNDNGNGGGDSNNQEGTEGDGDPSAFAPGTDSAGVTRSELAVSKKNNPGHGSYKKKDKVIEAVQHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E574</accession>
    <name>E3E574_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Terminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PPSC2_16285</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372020.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3478"/>
    <dbReference type="EnsemblBacteria" id="ADO57434">
        <property type="protein sequence ID" value="ADO57434"/>
        <property type="gene ID" value="PPSC2_16285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3476"/>
    <dbReference type="eggNOG" id="COG5484">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_084751_0_0_9"/>
    <dbReference type="OMA" id="MMERIAN"/>
    <dbReference type="OrthoDB" id="1645100at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018925">
        <property type="entry name" value="Phage_terminase_ssu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10668">
        <property type="entry name" value="Phage_terminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="50"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="272"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="244"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="53"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="279"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="294" mass="33003" checksum="C3D1569A57BEC858" modified="2011-01-11" version="1">MARERSPERDKAKQMWLESGGAMKLKDIAAALSIPEGRVRKWKSMDRWQDQLKGNVFDSSNGNVPNGTKGNAPNPRGAPKGNKNAVGNRGGAPPGNQNAKGNSGGPGGPYRNKKALKTGMYETIFLDALEEDEQELFDQIDTSPLAQLNEQLIMLSIQERRHMRRVKQLEAGLTDEEKKIKQELHQRKDKVPYTSPKTGKQIDLPVVTEGMKVTEIMTVTTSKLDKILKQEEALVKTRDKKLRVINLIASLQQEEEKLEIARERLELEKRKLLGYGGAEGDEGDDDDEEDDDEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E579</accession>
    <name>E3E579_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Adenine methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PPSC2_16305</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372025.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3483"/>
    <dbReference type="REBASE" id="28405">
        <property type="entry name" value="M.PpoSC2ORF3483P"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57439">
        <property type="protein sequence ID" value="ADO57439"/>
        <property type="gene ID" value="PPSC2_16305"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16305"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3481"/>
    <dbReference type="eggNOG" id="COG0863">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG1475">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024927_0_0_9"/>
    <dbReference type="OMA" id="VSEAGCM"/>
    <dbReference type="OrthoDB" id="1487464at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015840">
        <property type="entry name" value="DNA_MeTrfase_ParB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002295">
        <property type="entry name" value="N4/N6-MTase_EcoPI_Mod-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036758">
        <property type="entry name" value="Aden_M_ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00506">
        <property type="entry name" value="D21N6MTFRASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0680">Restriction system</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ParB" evidence="4">
        <location>
            <begin position="4"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="46216" checksum="E9066EC4380496D3" modified="2011-01-11" version="1">MEFRVLPIEQINAAAYNPRADLQRGDPEYEKLKASIESFGYVEPIVWNERTGNMVGGHQRYKIMVNELGHTELTVSVVDLDDQQEKLLNLALNKVSGLWDDQALYRLLDDLQMSGADLVLSGFDLEEFEDLAAEFTVPQDEALDLPVTDDDFDVQRALDEIKEPETRHGDVWQLGRHRLVCGDATNPDDVTLLMDGANAALVVTDPPYNVAVESVSERLAADGRSSIMNDNMPAEDFAGFLYAVFSNYAVVMQPTAAIYVFHPSSYHREFEDAMNAASIVVRTQCVWVKNAATFGWAQYRYKHEPVFYAHLKGKAPAWYGDRTQTTVWKAGLPVEDPLPETVWEVSRGDVNKYVHPTQKPLDLLAIPIRNSSQRGDEVVDFFGGSGSTLMTCEQMDRTCRTWNWTRFSAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5E9</accession>
    <name>E3E5E9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Molybdopterin converting factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">moaE1</name>
        <name evidence="1" type="ORF">PPSC2_17360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372249.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04700"/>
    <dbReference type="EnsemblBacteria" id="ADO57668">
        <property type="protein sequence ID" value="ADO57668"/>
        <property type="gene ID" value="PPSC2_17360"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17360"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3709"/>
    <dbReference type="eggNOG" id="COG0314">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_069141_1_0_9"/>
    <dbReference type="OMA" id="SEWKGHQ"/>
    <dbReference type="OrthoDB" id="1877633at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00756">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036563">
        <property type="entry name" value="MoaE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003448">
        <property type="entry name" value="Mopterin_biosynth_MoaE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02391">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54690">
        <property type="entry name" value="SSF54690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="234" mass="26104" checksum="83C413E2E117C80E" modified="2011-01-11" version="1">MQYHIQLFAGMAEQFGDVITMELSQETVTIADIRTRLNELYPEIASQLSGSFFTHHKKLASPDELVLPSDAIALHQSAPGMETVVSKCGLYAITYDPIDADEVTSKVHDPSHGASLTFNGTTREFTQGQRTVLLEYEAYVPMAMNTMKQIGDEIADRWPSTRTAITHRLGTVRIGETSVVIAVSAAHRDACYEASRHAIERLKQIVPIWKKEVWEDGSEWKGHQLGGWNPHNTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5I5</accession>
    <name>E3E5I5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE5</name>
        <name evidence="2" type="ORF">PPSC2_17525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57704.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_016324585.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3749"/>
    <dbReference type="EnsemblBacteria" id="ADO57704">
        <property type="protein sequence ID" value="ADO57704"/>
        <property type="gene ID" value="PPSC2_17525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3744"/>
    <dbReference type="eggNOG" id="COG0500">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_103647_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="53"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57704.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="235" mass="27453" checksum="8F9527B4471A964A" modified="2015-05-27" version="2">MDKVENIRLEEKKYHDFCYDNYNLFESGSWLHRPVQTVLDLLAEYKDYDNLSVLDLGAGIGRNSIPIAESMKIRKGKVVCVDLLKSAIDKLENYSRKYGVEQFIETKLSDIENFNIKQDEYDIIIAVSALEHVRSEREMELKIEEMTTGTKINGTNCIVVGTNIKEMRMKDAQQLEPMFEVNISTESMMELLRHHYIGWEVKKRLVKQLEYEIERNKQLVKLSMDCITFVAKKLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5J7</accession>
    <name>E3E5J7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372297.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3762"/>
    <dbReference type="EnsemblBacteria" id="ADO57716">
        <property type="protein sequence ID" value="ADO57716"/>
        <property type="gene ID" value="PPSC2_17590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3758"/>
    <dbReference type="eggNOG" id="ENOG5032XX8">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1537403_0_0_9"/>
    <dbReference type="OMA" id="KELIIWL"/>
    <dbReference type="OrthoDB" id="1697763at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="19766" checksum="C4D62270B49E5334" modified="2011-01-11" version="1">MTNTISLPKQLNDVVEPIGMSNGLTSVFIEILAISGSLLAKTNREKELIIWLAQRDQSVVGIGTVGFDIDEMPWTIDSFESEKDFILDTISNAADGLGWEKLSYKPRQDWVVNCLNQFGLMIKAFNKEEVDMNNYTEWSEIEEGDDNPTIPRGYPKCEKHGIYLNCHGCILCNNGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3E690</accession>
    <name>E3E690_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycerol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gldA1</name>
        <name evidence="8" type="ORF">PPSC2_13170</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56775.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885975.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00845"/>
    <dbReference type="EnsemblBacteria" id="ADO56775">
        <property type="protein sequence ID" value="ADO56775"/>
        <property type="gene ID" value="PPSC2_13170"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13170"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2803"/>
    <dbReference type="eggNOG" id="COG0371">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044754_1_0_9"/>
    <dbReference type="OMA" id="HAPDMAN"/>
    <dbReference type="OrthoDB" id="717704at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016205">
        <property type="entry name" value="Glycerol_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43616">
        <property type="entry name" value="PTHR43616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000112">
        <property type="entry name" value="Glycerol_dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00060">
        <property type="entry name" value="ADH_IRON_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Fe-ADH" evidence="7">
        <location>
            <begin position="9"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="95"/>
            <end position="99"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="117"/>
            <end position="120"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="126"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000112-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56775.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="370" mass="39604" checksum="621247FE72244F21" modified="2015-05-27" version="2">MSEKVFISPGKYVQGKNVIDKTGEYVKPLGHTALVIADKLVWEIAADRVVKSLEQAEITVVKVEFQGEASKNEVNRIADEGRSGQVDIVIGVGGGKTLDTAKAVNELLDSSVVIVPTTASTDAPTSALSVLYTDEGAFDTYSFFSKNPSLILVDTKVISQAPPLFLSSGIADAMATWIETRAVIEARATTMAGGLPTLAAEAIASKCEEVLFDYGLQAYESVKRKVVTPALEAVVEANTLLSGLGFESGGLAGAHAIHNGFTVLEGDIHHLTHGQKVAFGTLVQLALEKRPLTEVERYIDFYLKLDLPVTLKDIKLQEASREDLYRVAQAATKEGETAHNLPFAVTADDVLDAILAADQYSVAYKAKIGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6C1</accession>
    <name>E3E6C1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">msbA9</name>
        <name evidence="10" type="ORF">PPSC2_18820</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372567.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06030"/>
    <dbReference type="EnsemblBacteria" id="ADO57990">
        <property type="protein sequence ID" value="ADO57990"/>
        <property type="gene ID" value="PPSC2_18820"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18820"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4034"/>
    <dbReference type="eggNOG" id="COG1132">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_84_9_9"/>
    <dbReference type="OMA" id="HIMAFTI"/>
    <dbReference type="OrthoDB" id="643917at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="133"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="162"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="281"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="24"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="339"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="371"/>
            <end position="378"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="551" mass="60590" checksum="4C0E610FABDACC5E" modified="2011-01-11" version="1">MRRHGLRIMGQLLVLAGPLLPVLLITIVTGVLGFVCAIGIIVYGALALLTATGITTGYSMTFLLTAIVLCAVLRGVFRYGEQMSGHYLAFKLLAVLRDKVLLALRRLAPAKLEGKDKGNLISLITSDIELLEVFYAHTIAPVMIGIITSLIMVFFIGSYEPLLGGIAALAYITVGLFIPLLTSRMGKRQGMEYRSSFGQLSSYFLDSLRGMKEIVQYGQGEQRLNEINRRTDQLDAKQKDLKHHEGITRAITDAAVIGFSFLMLLAGLYGMSKGQMDFTSMLISVIALFSSFGPVVALSNLSNNLLQTLASGERVLSLLEETPEVEENMDGMTVGFTGAQIDKVTFAYDGQTVLKDVSLTIPPKRIIGIQGKSGSGKSTLLKLLMRFRDPQQGGILLSEHDLKDIETRHLRSLQSYVDQHTFLFDDSIAANIKIGKPDATHQQVVEAARKASVHDFIMTLPQGYDSRVGELGDRLSGGERQRLGLARAFVHDAPLLLLDEPTSNLDSLNEAIILKSLKEQQQDKTIILVSHRSSTMRMADKIFQMDNRRLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6C4</accession>
    <name>E3E6C4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PTS mannitol transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mtlA1</name>
        <name evidence="2" type="ORF">PPSC2_18835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372570.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06045"/>
    <dbReference type="EnsemblBacteria" id="ADO57993">
        <property type="protein sequence ID" value="ADO57993"/>
        <property type="gene ID" value="PPSC2_18835"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18835"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4037"/>
    <dbReference type="eggNOG" id="COG4668">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_072531_3_0_9"/>
    <dbReference type="OMA" id="EDYIQAM"/>
    <dbReference type="OrthoDB" id="1810962at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd00211">
        <property type="entry name" value="PTS_IIA_fru"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016152">
        <property type="entry name" value="PTrfase/Anion_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002178">
        <property type="entry name" value="PTS_EIIA_type-2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00359">
        <property type="entry name" value="PTS_EIIA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55804">
        <property type="entry name" value="SSF55804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51094">
        <property type="entry name" value="PTS_EIIA_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00372">
        <property type="entry name" value="PTS_EIIA_TYPE_2_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PTS EIIA type-2" evidence="1">
        <location>
            <begin position="2"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="15876" checksum="38A123D4FFDCD35F" modified="2011-01-11" version="1">MSIMTIDKIKMNATAKDKYEAIRMAGQILLDAGHITTEYIDKMLEREEIVSTYIGNGLAIPHGTKESKTLVQSTGISIVQFPQGVDFGEEKAYMVIGIAAQGGDHMEILTSIAVVCAEEENMDKLRNAVIPQEIIDLFESELEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6C6</accession>
    <name>E3E6C6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PTS system mannitol-specific EIICB component</fullName>
            <ecNumber evidence="4">2.7.1.197</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">EIICB-Mtl</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="20" type="primary">mtlA3</name>
        <name evidence="20" type="ORF">PPSC2_18845</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="20 21" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20 21">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II CmtAB PTS system is involved in D-mannitol transport.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-mannitol(out) + N(pros)-phospho-L-histidyl-[protein] = D-mannitol 1-phosphate(in) + L-histidyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:33363"/>
            <dbReference type="Rhea" id="RHEA-COMP:9745"/>
            <dbReference type="Rhea" id="RHEA-COMP:9746"/>
            <dbReference type="ChEBI" id="CHEBI:16899"/>
            <dbReference type="ChEBI" id="CHEBI:29979"/>
            <dbReference type="ChEBI" id="CHEBI:61381"/>
            <dbReference type="ChEBI" id="CHEBI:64837"/>
            <dbReference type="EC" id="2.7.1.197"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.1.197" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372572.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06055"/>
    <dbReference type="EnsemblBacteria" id="ADO57995">
        <property type="protein sequence ID" value="ADO57995"/>
        <property type="gene ID" value="PPSC2_18845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4039"/>
    <dbReference type="eggNOG" id="COG2213">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028721_2_0_9"/>
    <dbReference type="OMA" id="GWAIKRF"/>
    <dbReference type="OrthoDB" id="554815at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022872">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05567">
        <property type="entry name" value="PTS_IIB_mannitol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036095">
        <property type="entry name" value="PTS_EIIB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013011">
        <property type="entry name" value="PTS_EIIB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003501">
        <property type="entry name" value="PTS_EIIB_2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029503">
        <property type="entry name" value="PTS_EIIB_mannitol"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003352">
        <property type="entry name" value="PTS_EIIC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013014">
        <property type="entry name" value="PTS_EIIC_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004718">
        <property type="entry name" value="PTS_IIC_mtl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02378">
        <property type="entry name" value="PTS_EIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02302">
        <property type="entry name" value="PTS_IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52794">
        <property type="entry name" value="SSF52794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00851">
        <property type="entry name" value="mtlA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51099">
        <property type="entry name" value="PTS_EIIB_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51104">
        <property type="entry name" value="PTS_EIIC_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="16" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="14 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="12 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 17" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="88"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="169"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="277"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="321"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIC type-2" evidence="19">
        <location>
            <begin position="21"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="PTS EIIB type-2" evidence="18">
        <location>
            <begin position="402"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="16">
        <location>
            <begin position="346"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00021825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00033349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS51104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ADO57995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="492" mass="51446" checksum="CBDC63FCC043C4B6" modified="2011-01-11" version="1">MSTVDTKSSSNGGARVAVQRFGRFLSGMVMPNMGAFIAWGLITALFIPTGWFPNEGFAQLVDPMKNYLLPLLIGYTGGTMIHGQRGGVIGAIMTMGVIVGADIPMFLGAMVAGPLAAWILKKFDKAIEGKVKSGFEMLVNNFSAGIIGAILALLAHVAIGPVVQTISQVLSTGVQFLVNAGLLPLVNLIIEPGKVLFLNNALNHGVLSPIALEEAARTGKSVLFMLESNPGPGLGILLAYCLFGKGSAKSSAPGAVIIHFFGGIHEIYFPYILMKPILILAAIAGGVVGTFCFMLTGAGLVAAPSPGSIIAYFLMTPKGGYLPMLSGVVAAAVVSFAVAAVLLKTGKQKEEGLEEAASRLKDMKNQSKGASANATVMEDNRASDRAAEIAADRTLKDKSEVNKIVFSCDAGMGSSAMGASILRKKMKQAGVGVTVTNTAISEIPQDADIVITQKTLTDRAKTVAPNAEHISIDNFLKSPEYEALVERLKSDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6J4</accession>
    <name>E3E6J4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-N-acetylglucosamine 2-epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">capG</name>
        <name evidence="3" type="ORF">PPSC2_20130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UDP-N-acetylglucosamine 2-epimerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372826.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07380"/>
    <dbReference type="EnsemblBacteria" id="ADO58254">
        <property type="protein sequence ID" value="ADO58254"/>
        <property type="gene ID" value="PPSC2_20130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4290"/>
    <dbReference type="eggNOG" id="COG0381">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041674_0_0_9"/>
    <dbReference type="OMA" id="EPLGFHD"/>
    <dbReference type="OrthoDB" id="1117971at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008761">
        <property type="term" value="F:UDP-N-acetylglucosamine 2-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003331">
        <property type="entry name" value="UDP_GlcNAc_Epimerase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029767">
        <property type="entry name" value="WecB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43174">
        <property type="entry name" value="PTHR43174"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02350">
        <property type="entry name" value="Epimerase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00236">
        <property type="entry name" value="wecB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase_2" evidence="2">
        <location>
            <begin position="29"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="363" mass="40716" checksum="6785EDCCDA2B95D5" modified="2011-01-11" version="1">MKILTVLGTRPEIIRLSLIIPKLDHYADEHVLVHTGQNYTESLSGQFFRELGLRAPDYVLQEKAGTLGKQLSAMYSQMEDILNKERPDHVLLLGDTNSALCALLAERMGYPVVHMEAGNRCYDLDVPEEKNRRVIDAISTINMPYTEQSKQHLLREGFPSQRIILTGNPIYEVMQHYEKEISGSEILKKLGLSPGKYFLVTAHRAENVDHPPHLLAILDGLNRVARQFEQRVICSIHPRTAARIASHPPIQLDPLVEFHEPFGFFDFVLLERHARCALTDSGTVQEECCVMGVPTVTMRRTTERPETVDCGSNIVSGLDGEVIATAVAIMTGMNHKWQCPAGYLAEDVSDKVVKFLLGGKRHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6K5</accession>
    <name>E3E6K5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase family 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_20180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372837.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07430"/>
    <dbReference type="CAZy" id="GT2">
        <property type="family name" value="Glycosyltransferase Family 2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58265">
        <property type="protein sequence ID" value="ADO58265"/>
        <property type="gene ID" value="PPSC2_20180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4299"/>
    <dbReference type="eggNOG" id="COG1216">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023845_0_6_9"/>
    <dbReference type="OMA" id="AWYHIDL"/>
    <dbReference type="OrthoDB" id="957193at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="5"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="266" mass="30150" checksum="5EB79ED9A9483ACB" modified="2011-01-11" version="1">MSLTSIIIPTYNGLHLLKPCIEAIRTHTIDAPYEIIVVDNASNDGTDDFCASERLISIRLPENRGFPAACNMGLRLASGDQFVILNNDVTVTRGWLSNMLAALHSESTVGLVGPVTNYISGIQQIHGIEGDFASCLRYAEQNNVSNPSRWQEVKRLVGFCLLFRRELLERIGWLDERFSPGHYEDDDYCLRARVHGYKLLMCNDCFVYHQGNASFSRSETSWLEELIERNYRLFIEKWSIDPRMFIETGNAAIPCTEHAVEGGRKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6N6</accession>
    <name>E3E6N6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Aminoglycoside N(3)-acetyltransferase</fullName>
            <ecNumber evidence="5">2.3.1.81</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yokD</name>
        <name evidence="6" type="ORF">PPSC2_20310</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a 2-deoxystreptamine antibiotic + acetyl-CoA = an N(3')-acetyl-2-deoxystreptamine antibiotic + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12665"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57921"/>
            <dbReference type="ChEBI" id="CHEBI:77452"/>
            <dbReference type="EC" id="2.3.1.81"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the antibiotic N-acetyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.81" evidence="5"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372868.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07565"/>
    <dbReference type="EnsemblBacteria" id="ADO58296">
        <property type="protein sequence ID" value="ADO58296"/>
        <property type="gene ID" value="PPSC2_20310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4330"/>
    <dbReference type="eggNOG" id="COG2746">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_060091_0_0_9"/>
    <dbReference type="OMA" id="HATDCRL"/>
    <dbReference type="OrthoDB" id="1018324at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046353">
        <property type="term" value="F:aminoglycoside 3-N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003679">
        <property type="entry name" value="Amioglycoside_AcTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028345">
        <property type="entry name" value="Antibiotic_NAT-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11104">
        <property type="entry name" value="PTHR11104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02522">
        <property type="entry name" value="Antibiotic_NAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110710">
        <property type="entry name" value="SSF110710"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3 5" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="269" mass="29692" checksum="B2A63A831EE3A493" modified="2011-01-11" version="1">MTVQPITNRPVTRSDVMKGLKELGVQSGMTLLVHSSMRSFGRFVPGGASTILAALTEAIGREGTLVMPTQSHDLTDPSTWMNPPLDESWWELVREEMPAYDPAWTLTGGMGVIVETFRGLPGTVRSGHPHVSLAACGPAAIGLLEAHELDFGLGEHSPLAKLYEADAYVLLLGCGHDSNTSLHLAEYRTAYNGREVVTHQAPMMVDGTKTWVSFQDYNITSDDFEQLGLDFERECPTSFMRVNIGEASCFFARQRDLVDYAEQWLSTHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6N8</accession>
    <name>E3E6N8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Succinate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">sdhB3</name>
        <name evidence="8" type="ORF">PPSC2_20315</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372870.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07570"/>
    <dbReference type="EnsemblBacteria" id="ADO58298">
        <property type="protein sequence ID" value="ADO58298"/>
        <property type="gene ID" value="PPSC2_20315"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20315"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4331"/>
    <dbReference type="eggNOG" id="COG0479">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_044838_3_3_9"/>
    <dbReference type="OMA" id="DGQYFGP"/>
    <dbReference type="OrthoDB" id="1605514at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051538">
        <property type="term" value="F:3 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004489">
        <property type="entry name" value="Succ_DH/fum_Rdtase_Fe-S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025192">
        <property type="entry name" value="Succ_DH/fum_Rdtase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13085">
        <property type="entry name" value="Fer2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13183">
        <property type="entry name" value="Fer4_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00384">
        <property type="entry name" value="dhsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="7">
        <location>
            <begin position="151"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="28349" checksum="026EE91F2E36A2BF" modified="2011-01-11" version="1">MSEQAVKSNKTVKFVVTRQDEPNASSYTEEFELAYRPGMNVISALMEIQRNPVDSQGKETAPVCWESNCLEEVCGACSMVINGKPRQACAALVDKLEQPITIAPMSTFPVVRDLVIDRSRMFNALKKVKAWIPIDGTYDLGPGPRMAEKKRQWAYELSKCMTCGVCLEACPNVNEKTTFIGPAAISQVRLFNSHPTGEMNQEERLDALMTDDGLEGCGNSQNCVRSCPKGIPLTTSIAEMNKQTTKHMFKRWLTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3E733</accession>
    <name>E3E733_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 9">50S ribosomal protein L1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">rplA</name>
        <name evidence="10" type="ORF">PPSC2_22495</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.</text>
    </comment>
    <comment type="function">
        <text evidence="9">Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the universal ribosomal protein uL1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432594.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09960"/>
    <dbReference type="EnsemblBacteria" id="ADO58735">
        <property type="protein sequence ID" value="ADO58735"/>
        <property type="gene ID" value="PPSC2_22495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4769"/>
    <dbReference type="eggNOG" id="COG0081">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062853_0_0_9"/>
    <dbReference type="OMA" id="GWTDVDV"/>
    <dbReference type="OrthoDB" id="1671455at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00403">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01318_B">
        <property type="entry name" value="Ribosomal_L1_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005878">
        <property type="entry name" value="Ribosom_L1_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002143">
        <property type="entry name" value="Ribosomal_L1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023674">
        <property type="entry name" value="Ribosomal_L1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028364">
        <property type="entry name" value="Ribosomal_L1/biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016095">
        <property type="entry name" value="Ribosomal_L1_3-a/b-sand"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00687">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002155">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56808">
        <property type="entry name" value="SSF56808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01169">
        <property type="entry name" value="rplA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0678">Repressor</keyword>
    <keyword evidence="7 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 9 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 9" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="4 9" id="KW-0810">Translation regulation</keyword>
    <keyword evidence="9" id="KW-0820">tRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="24625" checksum="E234E5523F8B97A4" modified="2011-01-11" version="1">MAKHGKKYLEAAKLIDSEATYEPLEAVELVKKAATAKFDETVEAAVRLGVDSRKQDQAVRGVVVLPHGTGKTQRVLVFAKGDKVKEAEAAGADFVGDQDMINKIQQGWFEFDVCVATPDMMSEVGKLGRLLGGKGLMPNPKAGTVTFDVAKAVQEIKAGKIEYRLDKAGQIHAPIGKASFSAEQLNENLKALIEALNRAKPAAAKGVYLKNIAISSTMGPSARVNASVYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E748</accession>
    <name>E3E748_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373440.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10775"/>
    <dbReference type="EnsemblBacteria" id="ADO58903">
        <property type="protein sequence ID" value="ADO58903"/>
        <property type="gene ID" value="PPSC2_23285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4930"/>
    <dbReference type="eggNOG" id="COG5336">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137927_9_0_9"/>
    <dbReference type="OMA" id="GFYAGKW"/>
    <dbReference type="OrthoDB" id="2073672at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032820">
        <property type="entry name" value="ATPase_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09527">
        <property type="entry name" value="ATPase_gene1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="85" mass="8797" checksum="BF3DBAE0636C985F" modified="2011-01-11" version="1">MRKVVKPSKQNNNRNNTGNAFKAIGLVSAIGIDLTICTLGGFYAGKWLDAKLGGSGIWTGVSVLAGLVVGALSIALVIGKVLRDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E774</accession>
    <name>E3E774_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ykkD3</name>
        <name evidence="6" type="ORF">PPSC2_23410</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373465.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4990"/>
    <dbReference type="EnsemblBacteria" id="ADO58929">
        <property type="protein sequence ID" value="ADO58929"/>
        <property type="gene ID" value="PPSC2_23410"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23410"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4956"/>
    <dbReference type="eggNOG" id="COG2076">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_133067_1_2_9"/>
    <dbReference type="OMA" id="YAMTELP"/>
    <dbReference type="OrthoDB" id="1990300at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000390">
        <property type="entry name" value="Small_drug/metabolite_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045324">
        <property type="entry name" value="Small_multidrug_res"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30561">
        <property type="entry name" value="PTHR30561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00893">
        <property type="entry name" value="Multi_Drug_Res"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="104" mass="10906" checksum="290107EEE880202F" modified="2011-01-11" version="1">MAWIALVIAGCSEVLGVIGMKGVTVGKGWKALALMILSFILSFSLLSYAMNSLPMGTSYAVWTGIGTVGSTITGMFLYGEQKSVLRVLFIAMILAAALGLKLIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7B7</accession>
    <name>E3E7B7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glnP7</name>
        <name evidence="8" type="ORF">PPSC2_23610</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373508.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11115"/>
    <dbReference type="EnsemblBacteria" id="ADO58972">
        <property type="protein sequence ID" value="ADO58972"/>
        <property type="gene ID" value="PPSC2_23610"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23610"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4998"/>
    <dbReference type="eggNOG" id="COG0765">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_019602_1_0_9"/>
    <dbReference type="OMA" id="YYILPRQ"/>
    <dbReference type="OrthoDB" id="1523519at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="58"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="22"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="25343" checksum="A60B2B62B65E010E" modified="2011-01-11" version="1">MLSSGINVLFEGSNFERLLGGLLVTLEIALLSIIIGTLLGILMGLLRTLQSKPIRFVLRFYLETFRIIPILVWLYVVYFGFTPLLNVDISGELTAVIVFSLWGAAEIGDIVRGALESLPKHQVESGQALGLTYWQLYRHVLIPQAVRRMLPGSINLATRMIKTTSLVVLIGVVEVVKVGQQIIELGVIKAPSASFWVYGFIFILYFLVCYPLSRLSKRFERRWQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7Q6</accession>
    <name>E3E7Q6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Thiazole synthase</fullName>
            <ecNumber evidence="4 6">2.8.1.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">thiG</name>
        <name evidence="8" type="synonym">thiG1</name>
        <name evidence="8" type="ORF">PPSC2_13580</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 6">Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>1-deoxy-D-xylulose 5-phosphate + 2-iminoacetate + [sulfur-carrier protein ThiS]-C-terminal Gly-NH-CH2-C(O)SH = 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate + [sulfur-carrier protein ThiS]-C-terminal Gly-Gly + 2 H(+) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:26297"/>
            <dbReference type="Rhea" id="RHEA-COMP:12908"/>
            <dbReference type="Rhea" id="RHEA-COMP:12909"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
            <dbReference type="ChEBI" id="CHEBI:62899"/>
            <dbReference type="ChEBI" id="CHEBI:77846"/>
            <dbReference type="ChEBI" id="CHEBI:90619"/>
            <dbReference type="ChEBI" id="CHEBI:90778"/>
            <dbReference type="EC" id="2.8.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 6">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homotetramer. Forms heterodimers with either ThiH or ThiS.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ThiG family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.10" evidence="4 6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371464.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_01265"/>
    <dbReference type="EnsemblBacteria" id="ADO56861">
        <property type="protein sequence ID" value="ADO56861"/>
        <property type="gene ID" value="PPSC2_13580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2890"/>
    <dbReference type="eggNOG" id="COG2022">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_062233_1_0_9"/>
    <dbReference type="OMA" id="PHNFQLI"/>
    <dbReference type="OrthoDB" id="784095at2"/>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990107">
        <property type="term" value="F:thiazole synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04728">
        <property type="entry name" value="ThiG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00443">
        <property type="entry name" value="ThiG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033983">
        <property type="entry name" value="Thiazole_synthase_ThiG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008867">
        <property type="entry name" value="ThiG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34266">
        <property type="entry name" value="PTHR34266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05690">
        <property type="entry name" value="ThiG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0704">Schiff base</keyword>
    <keyword evidence="5 6" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ThiG" evidence="7">
        <location>
            <begin position="4"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="region of interest" description="DXP binding" evidence="6">
        <location>
            <begin position="183"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="DXP binding" evidence="6">
        <location>
            <begin position="205"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with DXP" evidence="6">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>1-deoxy-D-xylulose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="255" mass="27160" checksum="7808E7F132482431" modified="2011-01-11" version="1">MLTIGKASFTSRLLLGTGKFPDLDIQSQAVEAAETEILTFAVRRLNLEERDKQHFLDTLDLNRYTLLPNTAGATTAEEAIRIAKLAKASGLCDMIKVEVIGDSKTLLPDPFETLKASEKLLEEGFVVLPYISDDVILAKRLQELGVHAVMPGASPIGTGHGLLNPFSLELIIEQAEVPVIVDAGIRSPGDAAMAMQLGADGVLLNTAVSGAKDPVKMAEAMKLAVRAGRYGFEAGMIPVKRYASASSPIEGMVQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8F7</accession>
    <name>E3E8F7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 15 16">UDP-N-acetylmuramoylalanine--D-glutamate ligase</fullName>
            <ecNumber evidence="6 15 16">6.3.2.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">D-glutamic acid-adding enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="15">UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15 19" type="primary">murD</name>
        <name evidence="19" type="ORF">PPSC2_16615</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 15 16">Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15 16">
            <text>ATP + D-glutamate + UDP-N-acetyl-alpha-D-muramoyl-L-alanine = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate</text>
            <dbReference type="Rhea" id="RHEA:16429"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29986"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83898"/>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 15 16">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 15 16">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 15">Belongs to the MurCDEF family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.9" evidence="6 15 16"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372091.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03950"/>
    <dbReference type="EnsemblBacteria" id="ADO57506">
        <property type="protein sequence ID" value="ADO57506"/>
        <property type="gene ID" value="PPSC2_16615"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16615"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3546"/>
    <dbReference type="eggNOG" id="COG0771">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_032540_0_1_9"/>
    <dbReference type="OMA" id="CNFENYL"/>
    <dbReference type="OrthoDB" id="1093223at2"/>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008764">
        <property type="term" value="F:UDP-N-acetylmuramoylalanine-D-glutamate ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00639">
        <property type="entry name" value="MurD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005762">
        <property type="entry name" value="MurD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01087">
        <property type="entry name" value="murD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="13 15 16" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="9 15 16" id="KW-0132">Cell division</keyword>
    <keyword evidence="11 15 16" id="KW-0133">Cell shape</keyword>
    <keyword evidence="14 15 16" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="8 15" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="15 19" id="KW-0436">Ligase</keyword>
    <keyword evidence="15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12 15 16" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase_M" evidence="18">
        <location>
            <begin position="117"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="17">
        <location>
            <begin position="327"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <begin position="119"/>
            <end position="125"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00015655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU003664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ADO57506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="473" mass="50638" checksum="DEFD5A25188562E0" modified="2011-01-11" version="1">MNHPDAYRDQEVVIIGLAKSGVQVAKVLHQAGAKLTVNDKKDREQCPEASELEALGISVLCGGHPEGLIHPGVKLVVKNPGIPYTAPPVQKAVELGIEVVTEVEVAYHLCKAPIIGITGSNGKTTTTTWVGKLLEASGMNPIVAGNIGTPLCEAAVDAKSDEWMVVELSSFQLKGTKDFKPAVACLLNVAETHLDYHGGMEDYVASKARLFANQTASDTAVVNWDDSVCRELVPYIQAKLLPFSMTERLQEGLFADPPYIPDVTDDIERNIVYRDGNGVLHPIIGVTDIGLPGRFNVENALAACAIAIAAGAEPAKLAEPLGSFRGVEHRLEYVLEHGGVAYYNNSKATNSKATMMALSSFKQPIVLIAGGLDRGSDYAELVPSLQEGVKAVVLLGETRHKLADRARQAGIEHVKVVDNGEDAAATLVEAVNKAAQFAETGDVVLLSPACASWDMFQSYEERGRIFKEAAHKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8L2</accession>
    <name>E3E8L2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqfD</name>
        <name evidence="2" type="ORF">PPSC2_16865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372144.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04200"/>
    <dbReference type="EnsemblBacteria" id="ADO57561">
        <property type="protein sequence ID" value="ADO57561"/>
        <property type="gene ID" value="PPSC2_16865"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3600"/>
    <dbReference type="eggNOG" id="COG0561">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_050521_1_0_9"/>
    <dbReference type="OMA" id="VRARVWY"/>
    <dbReference type="OrthoDB" id="1194127at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010690">
        <property type="entry name" value="YqfD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06898">
        <property type="entry name" value="YqfD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029895">
        <property type="entry name" value="SpoIV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02876">
        <property type="entry name" value="spore_yqfD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="397" mass="45003" checksum="5A60FD6712469F73" modified="2011-01-11" version="1">MKHPALAKLRGTVTLAVEGESVEAFINLLTDHHIPVWNVRPIGTRHAEMNLLLPHVFLLRPLLRRTGCKMHVLKRQGLPFTAVRLAKRKFFLAGLALFWIGLLLMSSLIWDIEVKGNDKLPTESILKAARQEGLYPFQWSFRLSSQDKLSRALMQKLPEASWIGVERQGTLVTIQVVEASQPTPPSLYSPRHLISKADAVVTEIFAEQGRPVVHKNTRVKKGAILISGTLGDEENQQQVVAKGEIKGLVWHEYEISSPMVRRSSTYTGNSHDRLYLVLGNRAIQLWGYGKIPYSTHKTTVEHDPLTWRSYKLPMGWMNESVRETKIQEQKLTETEAKMSGIEGARADILAKYGKGTKIMSQKILHEKRENGKVYMKVLFEVEQDIAEELPLVHNQGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8P1</accession>
    <name>E3E8P1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372330.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3796"/>
    <dbReference type="EnsemblBacteria" id="ADO57750">
        <property type="protein sequence ID" value="ADO57750"/>
        <property type="gene ID" value="PPSC2_17745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3793"/>
    <dbReference type="eggNOG" id="ENOG50330YB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_098218_1_0_9"/>
    <dbReference type="OMA" id="DIIVHKR"/>
    <dbReference type="OrthoDB" id="1450775at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="178" mass="21498" checksum="685EDCFF18E8BB20" modified="2011-01-11" version="1">MNPTITKGINIAISKLFEKDHHLLSHDLNERTIAHKLAVYLQEEFQEYNVDCEYNRNVDEANKQKRIYVLESECKRLKKDFIKDIVDDDTEYMGLSTFPDIVIHRRGKNTDNYLVIEIKKSTNRLDRRFDFKKLECYTDKERYNNLEYDWGLFIEFETGMEKIKKTELIWFKEGKRIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8P9</accession>
    <name>E3E8P9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17785</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372338.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_05070"/>
    <dbReference type="EnsemblBacteria" id="ADO57758">
        <property type="protein sequence ID" value="ADO57758"/>
        <property type="gene ID" value="PPSC2_17785"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17785"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3801"/>
    <dbReference type="eggNOG" id="ENOG5032U0A">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_052640_0_0_9"/>
    <dbReference type="OMA" id="RDEYHYD"/>
    <dbReference type="OrthoDB" id="1223655at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011044">
        <property type="entry name" value="Quino_amine_DH_bsu"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50969">
        <property type="entry name" value="SSF50969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="361" mass="40977" checksum="ADF0DD59AA206D27" modified="2011-01-11" version="1">MPFHHVSLPDLPQTIGRLTAIHPLKGGSQGSITLLALNTQAELWRLELRSGSAELCTHICIPDFNPLQPVQMVTSPDGKYVAISNRFGRHAAVYDLVHAQEKMQLSRDEYHYDKSMFPLAFVHRDGACILVHGTEWNRLDLTDVETGMLLTARPTPVYNSERKDEHYLNYFHGRLLTSPEGKWIADTGWVWAPLGVVRTWSLSNWLLNSWESENGPSVRHLWQTIDWDGPVCWTGPDRLAVWGQMDADLLEEEDWGEEGVEPAVVLFDMTQPGYRRVLPAIPPLNCKPDEYGIYPYPQADMAVSGDRLFLWGKGVPLQVWRLSSGVREYVDTVRFPLIYHHEAGIFIELNPDSGCTALSYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8T0</accession>
    <name>E3E8T0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yfmS1</name>
        <name evidence="3" type="ORF">PPSC2_17930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372369.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3835"/>
    <dbReference type="EnsemblBacteria" id="ADO57789">
        <property type="protein sequence ID" value="ADO57789"/>
        <property type="gene ID" value="PPSC2_17930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3830"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_043276_0_0_9"/>
    <dbReference type="OMA" id="SKIMESA"/>
    <dbReference type="OrthoDB" id="429006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="Methyl-accepting transducer" evidence="2">
        <location>
            <begin position="100"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="30661" checksum="378517131C2A218D" modified="2011-01-11" version="1">MNQVEAVLTAMPYIREAARQDVLISVLDREKFLFFQSGKSLVYDFKAGDPLPDVHKNFKMLVGGEKTRVRYDAEVFGFAADSYFHPIKNEQNEIEAVMCITYSTDNQDQLKKLMSQAEDVTSKLVEGIQHVAAHSEELSATAEDILSNTKKAVEDSGNVTEVAGYIKEISEQTNLLGLNAAIEAARVGEAGAGFGVVAAEIRKMSTGTKEATGRIEQSLQAVRQSVYNMEQEITQITVSSQEQAKLVSEFMNIIDQLNETNQGLRGLIEKITNDVDAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8W3</accession>
    <name>E3E8W3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cheW9</name>
        <name evidence="11" type="ORF">PPSC2_19150</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372636.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06350"/>
    <dbReference type="EnsemblBacteria" id="ADO58061">
        <property type="protein sequence ID" value="ADO58061"/>
        <property type="gene ID" value="PPSC2_19150"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19150"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4103"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_19_9"/>
    <dbReference type="OMA" id="RDQTYMM"/>
    <dbReference type="OrthoDB" id="477199at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="304"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="325"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="9">
        <location>
            <begin position="396"/>
            <end position="632"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO58061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="682" mass="74535" checksum="249B961A024C0782" modified="2011-01-11" version="1">MGIFQFKSLQARTFSTLVPLVLITLILISFLSYFFAKQKLDTEISQNAAHSLSRVKADIAANVDRHALLVSMLTKSAEQVGTEMNIEDYGRLFEQELTLNDMTYGLGIYFAKDAYDPGVTYRSIYVHRDGELVKQSTEYDDPQYDYLTQPWYTEAVERGKDINFTEPFYDSKLKINMITAGKAFYNREGKLLGVITGDLNMTNIQTYIEKMKFGTQGSAILMDKNGAILSSGLPSLKSGESLTNTINAEAAQAIQKGTSGQVSVAIDQENYRVMYETLPQTGWKIGVLLPESDLNRSANEMLKLLLIVSVIGILLIMGALLINNSGMIKEIKKIRQMTNRMALGDYTVELPHHRKDEFGQMADGINKVIVATRGMALRLSEESDVISGVSSKISQEISGATKDAQHNAGELAQVKEGAELQLTAAAESATAMEEMAVGIQRIAESIQHVSEATTEIEHKAQQGNERLNVVSQGMHKAKMSMDEAGRVVSSLNERSAQIGSIIGMIQEISGQTKLLSLNASIEAARAGEHGRGFAVVASEIGKLAVNVSESAEQITSRIRTMQEETKLALEGMQQGTLEMDEGVSILREVEERFIAMNQDIQQVAIEVQEVSSASEEMSAGSEEVAASIGYLADIAKASAVRAGQASERSERQLKDLEGLDSSAKSLTGVSDTLNQVVSRFRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Y0</accession>
    <name>E3E8Y0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bofC</name>
        <name evidence="2" type="ORF">PPSC2_19235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372653.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06435"/>
    <dbReference type="EnsemblBacteria" id="ADO58078">
        <property type="protein sequence ID" value="ADO58078"/>
        <property type="gene ID" value="PPSC2_19235"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19235"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4120"/>
    <dbReference type="eggNOG" id="ENOG5032U7R">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_105390_0_0_9"/>
    <dbReference type="OMA" id="LLTTYVC"/>
    <dbReference type="OrthoDB" id="1818754at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1740">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015050">
        <property type="entry name" value="BofC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038117">
        <property type="entry name" value="BofC_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08955">
        <property type="entry name" value="BofC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BofC_C" evidence="1">
        <location>
            <begin position="142"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="233" mass="26758" checksum="12F8B5F14482E297" modified="2011-01-11" version="1">MKRLSWKKQMKRRWKQWRRTVWACTILGAACLLAGLGILFSNHMQAMLSQPLATPVMAEMEEESPNYTSTEDRSSQMQLLQSIHASGISRKTRLLTTYVCGTETTSLGTLSSQQLESLLKQHPDWKGRLNTKGEVWLERRVEDLSESCKERAYMGLSTDGQLTLFEGLPKKEKVIRTFFQLDIGSMETALPEGVYKQLQQGIRVQDINEYNSVISTFSDFAVERTQRVLKQHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="81" xmlns="http://uniprot.org/uniprot">
    <accession>E3E969</accession>
    <name>E3E969_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Aspartate--tRNA ligase</fullName>
            <ecNumber evidence="7">6.1.1.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Aspartyl-tRNA synthetase</fullName>
            <shortName evidence="7">AspRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">aspS1</name>
        <name evidence="7" type="synonym">aspS</name>
        <name evidence="9" type="ORF">PPSC2_15845</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp)</text>
            <dbReference type="Rhea" id="RHEA:19649"/>
            <dbReference type="Rhea" id="RHEA-COMP:9660"/>
            <dbReference type="Rhea" id="RHEA-COMP:9678"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.12" evidence="7"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57342.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014600045.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03540"/>
    <dbReference type="EnsemblBacteria" id="ADO57342">
        <property type="protein sequence ID" value="ADO57342"/>
        <property type="gene ID" value="PPSC2_15845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3383"/>
    <dbReference type="eggNOG" id="COG0173">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014330_3_2_9"/>
    <dbReference type="OrthoDB" id="226836at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004815">
        <property type="term" value="F:aspartate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006422">
        <property type="term" value="P:aspartyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00044">
        <property type="entry name" value="Asp_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004524">
        <property type="entry name" value="Asp-tRNA-ligase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004115">
        <property type="entry name" value="GAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029351">
        <property type="entry name" value="GAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22594:SF5">
        <property type="entry name" value="PTHR22594:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02938">
        <property type="entry name" value="GAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55261">
        <property type="entry name" value="SSF55261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00459">
        <property type="entry name" value="aspS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="8">
        <location>
            <begin position="145"/>
            <end position="566"/>
        </location>
    </feature>
    <feature type="region of interest" description="Aspartate" evidence="7">
        <location>
            <begin position="200"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="222"/>
            <end position="224"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="446"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="480"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="487"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="532"/>
            <end position="535"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO57342.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="589" mass="66710" checksum="4FBBD1BD63B9A35D" modified="2015-05-27" version="2">MHRYRTHNCGELDQTHVGEIVRIAGWIKNIRNLGGIVFIDLRDHYGVTQIVVSDSNELKDFVSKISRESTISVIGAVCHRSESTISPHMKTGYIEVVAKEIEVLGKVINPLPFEVSSAHEAREDLRLKYRFLDLRNENLHDNIVLRSRVIQSIRKKMIDLDFLEIQTPILTSSSPEGARDYLVPSRVHPGQFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMAFATQEDVFNVVENMLYEVFSEFTNYKISKPFSRIPYQEAMLKYGSDKPDLRNPLIIHDVTELFTETDFKVFKNKTIRVIATPGCGGQPRSFYDDIVNFAMEAGAKGLSWIKFNDDMSLSGSIAKFIPEKVKNELMNVTQAGPGYALFFAADELKNVEKIAGAVRSQLGKRLDLLEKDTFKFCWIVDFPMFELDPDTHKIEFSHNPFSMPQGGMDALLNMNPLDILAYQYDIVCNGIELSSGAVRNHDTEIMVKAFEIAGYTYEEIKSRFPALFNAFQFGPPPHAGIAPGIDRIVMILANESNIREVIAFPMNSKAQDVLMGAPSEVTDKQLRDVNIKLANAQPQTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9D6</accession>
    <name>E3E9D6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase M15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ycdD3</name>
        <name evidence="2" type="ORF">PPSC2_16155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57409.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043886005.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3452"/>
    <dbReference type="MEROPS" id="M15.A05"/>
    <dbReference type="EnsemblBacteria" id="ADO57409">
        <property type="protein sequence ID" value="ADO57409"/>
        <property type="gene ID" value="PPSC2_16155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3450"/>
    <dbReference type="eggNOG" id="COG1876">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073296_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009045">
        <property type="entry name" value="Hedgehog_sig/DD-Pept_Zn-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039561">
        <property type="entry name" value="Peptidase_M15C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13539">
        <property type="entry name" value="Peptidase_M15_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55166">
        <property type="entry name" value="SSF55166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M15_4" evidence="1">
        <location>
            <begin position="75"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57409.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="29824" checksum="9D7EEE7AD085F25D" modified="2015-05-27" version="2">MDRMVQLTLEQIQKKSLNRLVGLNPVFKIVVEKLIERCYARGVRIVITQGLRTYAEQDALYAQGRNGDKRPKVTKARGGYSNHNFGFAADFALLLRDGRTVSWDTLRDDDKDSLPDWSEVVEEAKRLGLEWGGNWRSFKDMPHLQMTFGLSTADFRAGKRPTQSQLNTILAKINSLKMEDEHMTAEEKAAFKALQKRVIALESANKLTKVPAWAEQACINAKAAGVLDMANDGSYDFYRMITLLDRAGVFKIREALHNDRLET</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9F8</accession>
    <name>E3E9F8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Malate permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">maeN</name>
        <name evidence="3" type="ORF">PPSC2_16990</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the sodium:citrate (SCF) symporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372171.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04325"/>
    <dbReference type="EnsemblBacteria" id="ADO57589">
        <property type="protein sequence ID" value="ADO57589"/>
        <property type="gene ID" value="PPSC2_16990"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16990"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3628"/>
    <dbReference type="eggNOG" id="COG3493">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_041211_0_0_9"/>
    <dbReference type="OMA" id="NMGGTGD"/>
    <dbReference type="OrthoDB" id="1093189at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008514">
        <property type="term" value="F:organic anion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004679">
        <property type="entry name" value="2-OHcarboxylate_transport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40033">
        <property type="entry name" value="PTHR40033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03390">
        <property type="entry name" value="2HCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005348">
        <property type="entry name" value="YxkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1 2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0769">Symport</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="124"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="152"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="182"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="273"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="298"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="329"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="358"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="427"/>
            <end position="447"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR005348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="448" mass="47522" checksum="52750666E19E78AD" modified="2011-01-11" version="1">MENATNQPVIQKGQRWSKNTVDGFRMLGRIKVGVIPLPLYAVIALIVYAAAITERLPNDLLGGFAVIMILGILLSDLGAKLPLLKHIGGPAILSLMVPSLMVFWNMFSPSAMGAVHTLMKTSNFLYFYIACLVTGSILGMDRKMLMNGIVKIFAPIIIGSIAAVAVGMVVGMAFGYSAYHTFFFIIIPIISGGIGEGILPLSISYGMVLGKDSAVFVSQFIPAAIIGNIVAIIGAGVLKRLAEKKPKTSGNGRLLKLEKNKGELSPVNLGQSVSFPLMGGGLLLACTFFIVGKLLEPYLHIPGPILMILAAALIKCIQIMPNTLEQGAFHLYKCITASLTWPLMVGLGILYVPLDSVVGILTVPYAITCASVVVALIVTGYFTGKWIHMYPVEAALVTSCRGGLGGTGDVAILSASNRMELMPFAQIATRIGGAGTVILATLLLQLWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9H0</accession>
    <name>E3E9H0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372183.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3646"/>
    <dbReference type="EnsemblBacteria" id="ADO57601">
        <property type="protein sequence ID" value="ADO57601"/>
        <property type="gene ID" value="PPSC2_17045"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17045"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3640"/>
    <dbReference type="eggNOG" id="ENOG50305UC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1642073_0_0_9"/>
    <dbReference type="OMA" id="SRQGIRW"/>
    <dbReference type="OrthoDB" id="1693475at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="169" mass="18908" checksum="E5C21B431696EE51" modified="2011-01-11" version="1">MTGHFRKKALGFVLLIGAGVLLGMQLAGSGLRSVYGPEWDENPVSSVNQQKVEYEQTVIEDTPVADAQVHNRTYNTSRKVEFEPQTNMNEGNTNKRSEEQTARWTHEWDMKTAQDDNNQQGLETPRELLAVKAQQASVDTMADKTAGLLQNLSRQGIRWVVSVFDGVTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-02-10" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9S6</accession>
    <name>E3E9S6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_18285</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372445.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3914"/>
    <dbReference type="EnsemblBacteria" id="ADO57866">
        <property type="protein sequence ID" value="ADO57866"/>
        <property type="gene ID" value="PPSC2_18285"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18285"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3910"/>
    <dbReference type="eggNOG" id="ENOG50342PC">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1057053_0_0_9"/>
    <dbReference type="OMA" id="NNKFAVE"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="29678" checksum="EE73F660F5481E5E" modified="2011-01-11" version="1">MIGKIMHLIINASLDKDDSVIVAALKLLKNDCNLEELEGDYFAQLVSMIPLVKEQSTKALLIETIVESPEFVSDDTMLDEYVKLISEGATNVKEAARCLGAFTASGSTNKQIFLQLANKLNNKFAVEILVSMGRSNWGEIPHYLESFTQEVQNAQRIRYRSGIIAAFLLIVHPLCSEYAHISSLSFGYPFIEAAMNDWTWVTPKNTENIVQKKIVTSKEADVLVKLGRLLRYNKDLNSNEIAKLYTDFFEDKNPFDVIYTLPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9W6</accession>
    <name>E3E9W6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">RadC3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">radC3</name>
        <name evidence="9" type="ORF">PPSC2_19405</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the UPF0758 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58099.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06605"/>
    <dbReference type="EnsemblBacteria" id="ADO58099">
        <property type="protein sequence ID" value="ADO58099"/>
        <property type="gene ID" value="PPSC2_19405"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19405"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4140"/>
    <dbReference type="eggNOG" id="COG2003">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_073529_0_2_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd08071">
        <property type="entry name" value="MPN_DUF2466"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037518">
        <property type="entry name" value="MPN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025657">
        <property type="entry name" value="RadC_JAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001405">
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    </dbReference>
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        <property type="entry name" value="UPF0758_CS"/>
    </dbReference>
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        <property type="entry name" value="PTHR30471"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="radc"/>
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        <property type="entry name" value="UPF0758"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="MPN" evidence="8">
        <location>
            <begin position="107"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO58099.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="25324" checksum="7C9FD1C9F79271FE" modified="2015-05-27" version="2">MESPILMLRDLPHEERPRERMMTYGADALSNAELLAILLRTGTQSESSLHLAQRILQQAGNLRQLVDMSLSELTQIKGIGNAKAIQLKAGIELGRRLALSRHLETPVISCPRDVADLLFEQLRYLQKEHFVCLFLNTKNHVIAQETLSMGSLNSAIVHPREVFRAAIKCSSASIICAHNHPSGDPKPSPEDVQLTRRLMEAGNIVGIDVLDHIVIGDGTFVSLKEQGLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA09</accession>
    <name>E3EA09_PAEPS</name>
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        <submittedName>
            <fullName evidence="6">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">virR</name>
        <name evidence="6" type="ORF">PPSC2_19605</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06825"/>
    <dbReference type="EnsemblBacteria" id="ADO58142">
        <property type="protein sequence ID" value="ADO58142"/>
        <property type="gene ID" value="PPSC2_19605"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_19605"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4181"/>
    <dbReference type="eggNOG" id="COG3279">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_14_2_9"/>
    <dbReference type="OMA" id="MQYVDTI"/>
    <dbReference type="OrthoDB" id="1958442at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007492">
        <property type="entry name" value="LytTR_DNA-bd_dom"/>
    </dbReference>
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        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04397">
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="SMART" id="SM00850">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="HTH_LYTTR"/>
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    </dbReference>
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        <property type="entry name" value="RESPONSE_REGULATORY"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="33"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="HTH LytTR-type" evidence="5">
        <location>
            <begin position="201"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="3">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="278" mass="32831" checksum="0DAD0B6334530C28" modified="2011-01-11" version="1">MVIIFICKTSLRIDFFYNILDLYNIFEVVYLFQVAVCDDDPAMHKILQHFFMCMSVSESLDFNLQFFLSGEDLIKSYSSQERYSFHIILLDIEMRELSGIETAKLIRLFPDREVQIIFLTNYPEYMLESFEVQAFQYLLKPLTYKLFVEKINKLCHYMRSSVSHFLSVKNKTEHLVLRHSEIIAISKGENNYIHNELCIATDSHNYFISGTLKAVYEQLKYPFVFIHRSIIVNLVHIRKFSTTSVIMSNQQEFPVGRSHAKSLREAYARFIISRFQEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA95</accession>
    <name>E3EA95_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA photolyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PPSC2_20725</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07970"/>
    <dbReference type="EnsemblBacteria" id="ADO58387">
        <property type="protein sequence ID" value="ADO58387"/>
        <property type="gene ID" value="PPSC2_20725"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20725"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4420"/>
    <dbReference type="eggNOG" id="COG1533">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015525_2_2_9"/>
    <dbReference type="OMA" id="SYCYVRQ"/>
    <dbReference type="OrthoDB" id="979208at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040086">
        <property type="entry name" value="MJ0683-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43432">
        <property type="entry name" value="PTHR43432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01084">
        <property type="entry name" value="Uncharacterised_Radical_SAM_Su"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="6">
        <location>
            <begin position="19"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO58387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="271" mass="31129" checksum="F3BEE9F6B712A9E7" modified="2011-01-11" version="1">MKNEYYKSPKTLLNKGTGFLSGYTHSLNPYTGCTFGCSYCYVRQLPVSTFRREAWGTWVDIKKEAADILRKELRRAQSRGKVTIFMSSSTDPYQPAEYKEEVTRSLLEVMVEDPPDFLFVQTRSPLVRRDVDLLLQLKERVRVSITVETDREDIRKHFTPEAPPIQARLQTLQLLKEAGVPTQATIAPMLPSSEHFADKLVPLVNRVCIDDYFMGDGSGGRRTRSLNIGALYESLGLEEWYHPAAYKAVYERFLHVFPEEQLYVSKEGFEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAG3</accession>
    <name>E3EAG3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pqqE</name>
        <name evidence="6" type="ORF">PPSC2_21715</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373148.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4634"/>
    <dbReference type="EnsemblBacteria" id="ADO58581">
        <property type="protein sequence ID" value="ADO58581"/>
        <property type="gene ID" value="PPSC2_21715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4621"/>
    <dbReference type="eggNOG" id="COG0535">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_009273_4_4_9"/>
    <dbReference type="OMA" id="VFTILWE"/>
    <dbReference type="OrthoDB" id="1172757at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023885">
        <property type="entry name" value="4Fe4S-binding_SPASM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13186">
        <property type="entry name" value="SPASM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04085">
        <property type="entry name" value="rSAM_more_4Fe4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="5">
        <location>
            <begin position="91"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="410" mass="46243" checksum="9445219FBD104FD1" modified="2011-01-11" version="1">MVYVLNPYSRELFHNHQVIIANTKSGAFLKTSKSYYLVLKDMVNNGEIESLLSPTKSSQHADVIHNLTSLFYELVNIKCILTEEQLTNIHEEVLDVVYLGLTNRCNLHCKHCSASADAHFTDALTTEKVKEIIDQIVVLKPQAINVTGGEPMMRLDIMELLAYIKQTFNGAILLSTNGLFITPKNVEQLIRYVDKVSLSLDGYDEETCDQIRGKGVFSRVLKSIKLMQSNGLKKIALSMVITKYTFDGGEDKFLDLCEKLGVKPILRILTSAGRAGENSEEIFPEKPFVDDLTSQDVTCRLCSPGKRELFIGGNGKIYPCGGLMDSDDFVLGNVFDDNLIELMAKGNPKADHNKIGCVRPWEFEPCKNCNVNLFCHHCISNIYYLHQNQELFDTICQKQKKQLQELVWNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAZ3</accession>
    <name>E3EAZ3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sulfide reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yrkE3</name>
        <name evidence="1" type="ORF">PPSC2_24970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373806.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12465"/>
    <dbReference type="EnsemblBacteria" id="ADO59273">
        <property type="protein sequence ID" value="ADO59273"/>
        <property type="gene ID" value="PPSC2_24970"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24970"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5291"/>
    <dbReference type="eggNOG" id="COG2210">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_094970_1_1_9"/>
    <dbReference type="OMA" id="TMFFAFW"/>
    <dbReference type="OrthoDB" id="2045228at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032836">
        <property type="entry name" value="DsrE2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027396">
        <property type="entry name" value="DsrEFH-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13686">
        <property type="entry name" value="DrsE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75169">
        <property type="entry name" value="SSF75169"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="158" mass="18125" checksum="811D2C6E88DD2D53" modified="2011-01-11" version="1">MNKRMNLLMFSGDYDKAMAGLILANTARELDVEVTMFFAFWGLSLVRDPDKMTLEDKTIYEKLMDLMTPKGPEALPLSHMNFSGLGKLMLTEMLEDNEAPKLIHFLKGARKKNVKFYACKLSVDIMGFKPEEFIPELEIIEAKTYLKDALESDMQLFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB17</accession>
    <name>E3EB17_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gluconate permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gntP</name>
        <name evidence="2" type="ORF">PPSC2_25075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373830.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12570"/>
    <dbReference type="EnsemblBacteria" id="ADO59297">
        <property type="protein sequence ID" value="ADO59297"/>
        <property type="gene ID" value="PPSC2_25075"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25075"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5314"/>
    <dbReference type="eggNOG" id="COG2610">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027949_0_0_9"/>
    <dbReference type="OMA" id="LMRIGIP"/>
    <dbReference type="OrthoDB" id="1585405at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015128">
        <property type="term" value="F:gluconate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003474">
        <property type="entry name" value="Glcn_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30354">
        <property type="entry name" value="PTHR30354"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02447">
        <property type="entry name" value="GntP_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002746">
        <property type="entry name" value="Gluconate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00791">
        <property type="entry name" value="gntP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="228"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="264"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="298"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="348"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="384"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="423"/>
            <end position="447"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="448" mass="46764" checksum="FD8F359E1897FBD0" modified="2011-01-11" version="1">MPLVVVAIGILALLVLIMGFKLNTFISLIIVSFGVALALGMPLEEIVKTIEAGLGGTLGHLALIFGLGAMLGKLIADSGGAQRIAMTLVDKFGEKNIQWAVVAASFIIGIALFFEVGLVLLIPIVFAISKELKVSILYLGIPMVAALSVTHGFLPPHPGPTVIAGEYGANLGEVLLYGFIIAIPTVILAGPVFTKLAKKLVPASFTKTGNIASLGEQKVFKSEETPGFGISVFTAMLPVILMSIATIITLLQKTMGFEDNSLLAAIRFIGDASTSMLISLLVAVYTMGIARKIPIKDVMASCTTAITHIGMMLLIIGGGGAFKQVLINGGVGDYVADLFNGTTLSPILLAWIIAAILRISLGSATVAALTTAGLVIPMLGQSDVNLALVVLATGAGSLIASHVNDAGFWMFKEYFGLSMKETFATWTLLETIISVAGLGFILVLSLFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB35</accession>
    <name>E3EB35_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable malate:quinone oxidoreductase</fullName>
            <ecNumber evidence="4">1.1.5.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">MQO</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Malate dehydrogenase [quinone]</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mqo</name>
        <name evidence="5" type="synonym">mqo1</name>
        <name evidence="5" type="ORF">PPSC2_25155</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>(S)-malate + a quinone = a quinol + oxaloacetate</text>
            <dbReference type="Rhea" id="RHEA:46012"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.1.5.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 4">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Carbohydrate metabolism; tricarboxylic acid cycle; oxaloacetate from (S)-malate (quinone route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MQO family.</text>
    </comment>
    <dbReference type="EC" id="1.1.5.4" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373848.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12650"/>
    <dbReference type="EnsemblBacteria" id="ADO59315">
        <property type="protein sequence ID" value="ADO59315"/>
        <property type="gene ID" value="PPSC2_25155"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25155"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5331"/>
    <dbReference type="eggNOG" id="COG0579">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_028151_0_0_9"/>
    <dbReference type="OMA" id="PHLDTRW"/>
    <dbReference type="OrthoDB" id="1371190at2"/>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER01008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052589">
        <property type="term" value="F:malate dehydrogenase (menaquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008924">
        <property type="term" value="F:malate dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00212">
        <property type="entry name" value="MQO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006231">
        <property type="entry name" value="MQO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06039">
        <property type="entry name" value="Mqo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01320">
        <property type="entry name" value="mal_quin_oxido"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO59315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="499" mass="55037" checksum="D1B6B3E8691DEF06" modified="2011-01-11" version="1">MNSIQKNTDVILIGAGVMSATLGSLLKELAPEWEIKVFEKLASAGEESSNEWNNAGTGHAALCELNYTSEKSDGSVDIRKAVNINEQFQLSRQFWSFLVNSNLIRNPQDFIRPIPHMSLVMGEKNVSFLKKRFKALSSVSLFQGMEFSDDPEKLKEWIPLIMEGRTLNEPIAATKIDSGTDVNFGALTRMLFDHLKSKNVEIKYKHSVKDIKRASDGSWRVKVHNLDNGKIEYHTAKFVFIGGGGGSLPLLQRTGIPESKYIGGFPVSGLFMVCNNPKVVAQHHAKVYGKAKVGAPPMSVPHLDTRYIGNQKALLFGPFAGFSPKFLKTGSNLDLIGSVKPNNLITMLAAGAKEMALTKYLIQQVMLSNEKRLEELREFIPNAKIEDWEIVVAGQRVQVIKDTEGGKGTLQFGTEVVSSADGTVAALLGASPGASTAVHVMLEVLEKCFPQHMDEWEPKIKEMIPSYGMSLAENPELYQEIHNTTTETLGLGEKEPLHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB55</accession>
    <name>E3EB55_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mcpC</name>
        <name evidence="8" type="ORF">PPSC2_25245</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373868.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12755"/>
    <dbReference type="EnsemblBacteria" id="ADO59335">
        <property type="protein sequence ID" value="ADO59335"/>
        <property type="gene ID" value="PPSC2_25245"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25245"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5352"/>
    <dbReference type="eggNOG" id="COG0840">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_107_27_9"/>
    <dbReference type="OMA" id="DESANYF"/>
    <dbReference type="OrthoDB" id="429006at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024478">
        <property type="entry name" value="HlyB_4HB_MCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12729">
        <property type="entry name" value="4HB_MCP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0807">Transducer</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="187"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="212"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="283"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO59335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="572" mass="63532" checksum="0FF1D99E6DB4B695" modified="2011-01-11" version="1">MTIRNKVILTIVVTVITSLVIGGVGIYNLKRVQSSLEESLSIRAEVIDLIRTADIDLYQMLLAERSLYSYEPGSEQFSKQLEDYEKQKESAKKKLNKYKSIGTIFDNEEKLIQDYEATVAAYDLVSKKVIDGLSSKDSTVRERANLLSYQEGSEKFDQMEDALDHIGDLYYDDNQIMLDSTQKQYSFLRLVSILLTLAGLIASSLLGYLIIRSIHHPIRYLRGRVREIAEGNLAVDIRTFSQDELGQLTADFNIMVSRMKELISTVSQSIGHVNTSAHELTFIAEQTTATGEEMTSGINEIAVGASEQASLTEATSRETMALSDTIEKVNVRNKKMTSLSSEAEIVLRGGMDKVKKLQDHNLQTTEANQLVVQHIEGLAEQMLTISTIVQTINEVSEQTKLLALNASIEAARAGESGKGFAVVATEIRKLSTMTYESTERINTTIARLKSEVSQTLQVMNQTEVIISEQSLIVQESGTVFESIMDMLKEIISSIQEMDGDIGQMNVSREQVISSIIKISDVARDAASATEEISSASNDQSQAYSHLHSAAEQLKQSSQQVSEMISRFRIVQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB96</accession>
    <name>E3EB96_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvqF</name>
        <name evidence="3" type="ORF">PPSC2_20920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372997.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08150"/>
    <dbReference type="EnsemblBacteria" id="ADO58428">
        <property type="protein sequence ID" value="ADO58428"/>
        <property type="gene ID" value="PPSC2_20920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4462"/>
    <dbReference type="eggNOG" id="COG4758">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1254929_0_0_9"/>
    <dbReference type="OMA" id="VEVEMFV"/>
    <dbReference type="OrthoDB" id="1676210at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024425">
        <property type="entry name" value="DUF2154"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09922">
        <property type="entry name" value="DUF2154"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2154" evidence="2">
        <location>
            <begin position="100"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="215" mass="24481" checksum="43E9F4924E2AD487" modified="2011-01-11" version="1">MEKRKSALALAGIGIGIIILFGQWIGFLSVFALILMLAGIYKIRNSKIKKGYTMLAIGAGLLVLDHLFLFVVITLASLAVFYSRSRKLHKGQSSIFKHNFISNHKWDEVPWSLRSTSIWHVVGDVDADLTLALPEEREPVIFLQGIFGDIDITLPDNYGVEVEMFVLFGQIQFDRDHEAGMLNRLVWKSPHFEQSEYKVKFVVSYLAGDVRIRFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBU1</accession>
    <name>E3EBU1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LrgB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ywbG</name>
        <name evidence="6" type="ORF">PPSC2_24035</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373600.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11540"/>
    <dbReference type="EnsemblBacteria" id="ADO59065">
        <property type="protein sequence ID" value="ADO59065"/>
        <property type="gene ID" value="PPSC2_24035"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24035"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5087"/>
    <dbReference type="eggNOG" id="COG1346">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_082099_2_0_9"/>
    <dbReference type="OMA" id="ERIRQLW"/>
    <dbReference type="OrthoDB" id="1416872at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005261">
        <property type="entry name" value="CHP00659"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007300">
        <property type="entry name" value="CidB/LrgB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30249">
        <property type="entry name" value="PTHR30249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04172">
        <property type="entry name" value="LrgB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00659">
        <property type="entry name" value="TIGR00659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="85"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="201"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO59065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="225" mass="24142" checksum="A814D77B91BB01B2" modified="2011-01-11" version="1">MTGLLCIVLTLAIYWMAKRMYRTLPKVYLSPLLITPVVIILILTLTGVNYRSYNSGAHFLSMLLQPATIAFAVPLYRYFPVLKKHAAQIVLSVLSGSVVAVLSSMALAKWMHLDSSLLSSLIPRSITTPIAMNVSQTIGGNPTVTAVFVILTGLSGLIIGPMIVKLFRIENEVSRGVLLGTGAHGTGTSKAFEFSSLTGTISSISMVLAALFTLAAAPFLFHLML</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBV8</accession>
    <name>E3EBV8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">kdgR5</name>
        <name evidence="7" type="ORF">PPSC2_24115</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373617.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11620"/>
    <dbReference type="EnsemblBacteria" id="ADO59082">
        <property type="protein sequence ID" value="ADO59082"/>
        <property type="gene ID" value="PPSC2_24115"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24115"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5105"/>
    <dbReference type="eggNOG" id="COG1609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_037628_6_1_9"/>
    <dbReference type="OMA" id="RFFAEPY"/>
    <dbReference type="OrthoDB" id="1796334at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="4"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="HTH cro/C1-type" evidence="6">
        <location>
            <begin position="5"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="337" mass="38186" checksum="3BD88F93E085F631" modified="2011-01-11" version="1">MKKPTIEDVAQKAGVSKSTVSQFLNKRYKYMSDQTKDRIAEVIQELNYQPNGLARSLKQNRTFMVGVIVANIDYTLSIQSIRAIEEELQRFGIQVIICNADENPDKESQYIEMLKARQVDGLIIFPTGKHADIYNQLIREKYPLVFLDRLVDGVNTRSLLLDNEMAIKLAIQELVAHKHERIALITLPLGLNRITPRVERLSGYKKALEEHGLPFREEYMHSVPREEIQQTLKELFQLPEPPTALLAGNDIVLAEALKYVNARRIRIPAELSIIGIDDAEFAHIYNPPITTITQPIADMGKQAAKTLLSSIEEGGESVPIIYRFVPDINRGESVKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="63" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBW5</accession>
    <name>E3EBW5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">msmF3</name>
        <name evidence="7" type="ORF">PPSC2_24145</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373624.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11650"/>
    <dbReference type="EnsemblBacteria" id="ADO59089">
        <property type="protein sequence ID" value="ADO59089"/>
        <property type="gene ID" value="PPSC2_24145"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24145"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5112"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_0_9"/>
    <dbReference type="OMA" id="LGWHSMA"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="65"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="196"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="264"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="66"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO59089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="288" mass="32666" checksum="50894AC3F0621A37" modified="2011-01-11" version="1">MNKRLTTFYWMTVPAVLLFFIFLTLPALQGFYYSLTNWNGFGHQYHFVGFKNYINLFQDDNVGNAYWFTFKFAIVVTIAINILSLLIAIGLNAKIRFRNFFRGIYFLPNILSVLIVGYIFNYLFSNVFTIWGQNLGIGSLSTNILGSEQLAWVGVVIVAVWQGIAFNTVLYLAGLQTIPTSLYEASNLDGAGKWREFWSITFPLIAPFFTINMVLAMKNSLMVFDQIVALTNGGPGRATQSISHLIYTGGFRGGEFAYQSANSVIYFIVIAIISILQLRFLQRREMDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECB1</accession>
    <name>E3ECB1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YdjG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydjG</name>
        <name evidence="2" type="ORF">PPSC2_01335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368896.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14055"/>
    <dbReference type="EnsemblBacteria" id="ADO54254">
        <property type="protein sequence ID" value="ADO54254"/>
        <property type="gene ID" value="PPSC2_01335"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01335"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.264"/>
    <dbReference type="eggNOG" id="COG1198">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_039030_0_0_9"/>
    <dbReference type="OMA" id="WFAPNGL"/>
    <dbReference type="OrthoDB" id="1472466at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="318"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="344" mass="39382" checksum="0B665456B0B41D95" modified="2011-01-11" version="1">MPVIEYKCPNCGSGMVFDSETGMLSCHSCGREDNIDTIPDPLTNRIFSEDEAHEYHCNNCGAVIMTEVETSATVCSFCGSAVVLGDRLTGELAPAQVIPFSISKEEAIAAFKKWCKNGRLTPNRFMMADRIKGITGMYVPFWLYELHNHIEVQGEGTQVRTYTSGDYEYTETKHFDVYRKIRLNYVKVPIDAAEKMNDELMDKLEPFPYDQLKPFKTPYLAGYIAEKYSYNEEELFPRVKDKVKEYIDAYIQSTVSEYTFVSYTEKQIDTTLKQADYVLLPVWVIHYDYNQLEHTFAMNGQTGKVVGKPPISKFKVTAWFAGIFGITLFSLRLITWLIMGGEFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECT3</accession>
    <name>E3ECT3_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">M1-530</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">M1-530</name>
        <name evidence="1" type="ORF">PPSC2_01920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369017.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_14685"/>
    <dbReference type="EnsemblBacteria" id="ADO54377">
        <property type="protein sequence ID" value="ADO54377"/>
        <property type="gene ID" value="PPSC2_01920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_01920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.386"/>
    <dbReference type="eggNOG" id="ENOG502Z7Q0">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_031189_0_0_9"/>
    <dbReference type="OMA" id="DERPCNY"/>
    <dbReference type="OrthoDB" id="626251at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025394">
        <property type="entry name" value="DUF4127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13552">
        <property type="entry name" value="DUF4127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO54377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="513" mass="57998" checksum="6F4A1AA469781835" modified="2011-01-11" version="1">MVKPNTRLLFVPLDERPCNYQFPYLLAQGTDLEMERPPLEWMGQKKTPGDTTRLWAWLEERAASADGAIIAMDTLLYGGIVPSRLHGMSSEQVRNRANRLRRLKQLYPQLTLYAFQLIMRCPQYSLADEEPDYYADWGREIFRKGFIEHRQELAIATAEELLELADIDERLPIEILDDYLGRRRVNLEANQVALELVAEGVIDFMIIPQDDSAPYGYTAKDQQRLRSRISELGLDLKVYMYPGADEVGCTLLARWVNQTNHVVPLVYPRLSALQGAFVVPLFEDRYFYETLKYQIIAAGGLIASSAAEADLILLANTPGDTMAEASSQQHAMAGYDVHRNLVELVEYGAHMQHHTNKNIAIADVAYANGADLKLLRLLRQKGLLFKLAGYAGWNTSSNTLGTVIAQSMLYVRYGPTEEHLDFLGLRYAEDACYCAVVRTAMNNGIVEQMGFNKFMLDGSRGSVAAVIRGRLEQALDEYVNGPEGRVEITDCYMPWNRTFEVGLTVRHYAEGRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3ECY6</accession>
    <name>E3ECY6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Iron citrate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cbrA1</name>
        <name evidence="3" type="ORF">PPSC2_04310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369489.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17120"/>
    <dbReference type="EnsemblBacteria" id="ADO54855">
        <property type="protein sequence ID" value="ADO54855"/>
        <property type="gene ID" value="PPSC2_04310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.859"/>
    <dbReference type="eggNOG" id="COG4594">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_0_0_9"/>
    <dbReference type="OMA" id="NDEIWQT"/>
    <dbReference type="OrthoDB" id="1942521at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168787" evidence="1">
        <location>
            <begin position="40"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="2">
        <location>
            <begin position="66"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="328" mass="35479" checksum="A98870DC9EB4929E" modified="2011-01-11" version="1">MATPKQPLPLRTGMLLAAILVLLTAVMAGCGGQSQNNNAAAPQTTGDTRTIKHEMGETKVTGKPKRIVTLEFSFVDAATQLGVMPVGIAQENEDDIDGLLGKKIDFTPVGTRKQPNLETISSLKPDLIIADLNRHKSIYEELSEIAPTIVLKSRNSSYEQNLASFGVIADALGEKEKGEQILAAHKATMAKLKEGIQAGESRSVLLGVFRSDSLSAHGASSFDGQLLEQAGIHNALQNTSEPTVKLTLEQIAQADPDVIFLVEADEKLLAEWKQNPLWQNITAVKKGEVYEVNRALWTRYRGLGSAEKILEQAISLLYPAQNKGDGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3ED76</accession>
    <name>E3ED76_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CsoR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">csoR</name>
        <name evidence="2" type="ORF">PPSC2_02320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369073.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15085"/>
    <dbReference type="EnsemblBacteria" id="ADO54433">
        <property type="protein sequence ID" value="ADO54433"/>
        <property type="gene ID" value="PPSC2_02320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.442"/>
    <dbReference type="eggNOG" id="COG1937">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_130332_0_0_9"/>
    <dbReference type="OMA" id="TYCDDVL"/>
    <dbReference type="OrthoDB" id="1868412at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003735">
        <property type="entry name" value="Metal_Tscrpt_repr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038390">
        <property type="entry name" value="Metal_Tscrpt_repr_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33677">
        <property type="entry name" value="PTHR33677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02583">
        <property type="entry name" value="Trns_repr_metal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="116" mass="12802" checksum="AA16B72167620582" modified="2011-01-11" version="1">MAEEQPVSHTEVHGAHCGTDGEKTVRKSHHSAEFKNSLVSRLNRIEGQVRGIKGLIEKDTYCDDVLNQIAAVQSALNGVGKLLLEGHMKSCVIERMQAGEQEVIDELLVTVKKLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDC5</accession>
    <name>E3EDC5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein adenylyltransferase SelO</fullName>
            <ecNumber evidence="9">2.7.7.n1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">M1-1044</name>
        <name evidence="9" type="synonym">selO</name>
        <name evidence="10" type="ORF">PPSC2_04525</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-seryl-[protein] = 3-O-(5'-adenylyl)-L-seryl-[protein] + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:58120"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:15073"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:142516"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-threonyl-[protein] = 3-O-(5'-adenylyl)-L-threonyl-[protein] + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:54292"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:13847"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:138113"/>
            <dbReference type="EC" id="2.7.7.n1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-tyrosyl-[protein] = diphosphate + O-(5'-adenylyl)-L-tyrosyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:54288"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:13846"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:83624"/>
            <dbReference type="EC" id="2.7.7.n1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the SELO family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.n1" evidence="9"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369537.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17425"/>
    <dbReference type="EnsemblBacteria" id="ADO54904">
        <property type="protein sequence ID" value="ADO54904"/>
        <property type="gene ID" value="PPSC2_04525"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04525"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.908"/>
    <dbReference type="eggNOG" id="COG0397">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_010245_4_1_9"/>
    <dbReference type="OMA" id="YGPYGWL"/>
    <dbReference type="OrthoDB" id="130048at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00692">
        <property type="entry name" value="SelO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003846">
        <property type="entry name" value="SelO"/>
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    <dbReference type="PANTHER" id="PTHR32057">
        <property type="entry name" value="PTHR32057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02696">
        <property type="entry name" value="SelO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0460">Magnesium</keyword>
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    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
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    <feature type="active site" description="Proton acceptor" evidence="9">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="95"/>
            <end position="98"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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        <location>
            <begin position="130"/>
            <end position="131"/>
        </location>
        <ligand>
            <name>ATP</name>
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        </ligand>
    </feature>
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        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>ATP</name>
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        </ligand>
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        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="258"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
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        <location>
            <position position="267"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00009747"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
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        <source>
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        </source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
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    </evidence>
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            <dbReference type="HAMAP-Rule" id="MF_00692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ADO54904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="492" mass="55665" checksum="37D60C4DD93AAB63" modified="2011-01-11" version="1">MTEKKEIANKIGWNFDNSYSRLPESMFTKLNPNPVRSPKLIILNHPLAVSLGLNENALQRDDAVAMLAGNQVPEGATPLAQAYAGHQFGHFNMLGDGRALLLGEQITPLGKRVDIQLKGSGRTPYSRRGDGRAALGPMLREYIISEAMHALGIATTRSLAVVTTGEAIIRETEQPGAILTRVAASHLRVGTFQYVSAWGTSQDLRTLADYTLERHYPEVANDENRYLSLLQEVIKRQAKLIAQWQLVGFIHGVMNTDNMTLSGETIDYGPCAFMDTYNPETVFSSIDMQGRYAYVNQPHIAAWNLARFAETLLPLLHDNREQAVQLAEDAISDFANMFRHHWLTGMRAKLGIFNEELEDESLIEDLLKIMQKHRADYTNTFRALTLNKLEDADLFSTADFTQWNKQWQARLDRQQESEASSHQLMRSRNPAIIPRNHRVEEALEAAVEREDYRVMEKLLEVLSDPYAYSTEQEVYSTLPEEPTCPYRTFCGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDD7</accession>
    <name>E3EDD7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">herC2</name>
        <name evidence="3" type="ORF">PPSC2_04580</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369549.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0934"/>
    <dbReference type="EnsemblBacteria" id="ADO54916">
        <property type="protein sequence ID" value="ADO54916"/>
        <property type="gene ID" value="PPSC2_04580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.920"/>
    <dbReference type="eggNOG" id="COG3858">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG5184">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_544951_0_0_9"/>
    <dbReference type="OMA" id="EFLYSTP"/>
    <dbReference type="OrthoDB" id="308036at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012854">
        <property type="entry name" value="Cu_amine_oxidase-like_N"/>
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        <property type="entry name" value="Mao_N_sf"/>
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    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07833">
        <property type="entry name" value="Cu_amine_oxidN1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF50985"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55383">
        <property type="entry name" value="SSF55383"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168852" evidence="1">
        <location>
            <begin position="23"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="domain" description="Cu_amine_oxidN1" evidence="2">
        <location>
            <begin position="400"/>
            <end position="497"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="500" mass="55584" checksum="397B886DB742A93A" modified="2011-01-11" version="1">MKRRTLLLSIITLFLLSPRVWAAGDDFTSHIRSYDSGSLIQSDGSLWLWGYNQSVPTRIEGKPNVVKTFSNIINEGDLVFTLQDHSAWYVPRNNISESVKFVPLEGLQNLATVSSLGDHMLALSNEGNVFSADQLGDKNIFSRFRTLSGIDEVAHIDSYYEERPDYEERWIFLRKDGSVWKNTKALQGFEPISSLKDITAIAKNIALKKDGTVWTWPKEFDKNVAPSETLSVSQIHALSGIKTIKANRYSNLAIDQQGRLWFWGATVTGALDNTTYHNANTPILLTGVKDVKDAFFVERSILALTTSGNVYVASLDGEKLSSNVSFTLLAKNIQSIKAGPRHIIMQKTNGDLWGWGVNKHAQLGIGDYEFLYSTPVPVQKPILVRLNGTPVPLSNGVITRNGQAFIPLRSVFDKLGAEVTYDYNSKIAKMNQSKAGDHPVSLEINFKTSQTKVNGKSVELTNPPFMVNGIGYLPLRLISETLGAKVDWIQKEDTIVITTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="60" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDE2</accession>
    <name>E3EDE2_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Histidine kinase</fullName>
            <ecNumber evidence="1">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">desK</name>
        <name evidence="4" type="ORF">PPSC2_04600</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.13.3" evidence="1"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369554.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17495"/>
    <dbReference type="EnsemblBacteria" id="ADO54921">
        <property type="protein sequence ID" value="ADO54921"/>
        <property type="gene ID" value="PPSC2_04600"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.924"/>
    <dbReference type="eggNOG" id="COG4585">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_20_8_9"/>
    <dbReference type="OMA" id="LWFYTLA"/>
    <dbReference type="OrthoDB" id="1755994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011712">
        <property type="entry name" value="Sig_transdc_His_kin_sub3_dim/P"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07730">
        <property type="entry name" value="HisKA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="14"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="63"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="129"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="HisKA_3" evidence="3">
        <location>
            <begin position="178"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO54921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="377" mass="42880" checksum="601BC0999693C729" modified="2011-01-11" version="1">MQKWYQIFQRNTGLSPYVWVVFYILPFYYFSSSSTSHIILGTAIILVFFACYVLAFVSQGWLIYFWTSVQIAISITMTLLFSYMYFSIFIAYLIGNIKSKAAFTTLYIILMVITIGLINYGFVSQNPVFIKQIPFILLNLIGVILLPITNFNRNKSDRLQVQLEDANKKISELIKLEERQRIARDLHDTLGQKLSLIGLKSDLAGKLLDQYPERAHVEINDVRLTARSALKEVREMVTQMRGMRLEDELLRIRQILKAAHIELTLEGDPKLEHTSLMNENVLSMCMKEAVTNVVKHSGATACSITIEPSRKELTLRIQDNGVGIMGENAVFRGHGLQGMKERLEFVNGCMELLSDQGTTLVIKVPNITEKPNEEVGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDG2</accession>
    <name>E3EDG2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">M1-1078</name>
        <name evidence="2" type="ORF">PPSC2_04700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369574.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_17595"/>
    <dbReference type="EnsemblBacteria" id="ADO54941">
        <property type="protein sequence ID" value="ADO54941"/>
        <property type="gene ID" value="PPSC2_04700"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_04700"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.944"/>
    <dbReference type="eggNOG" id="COG2378">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_622332_0_0_9"/>
    <dbReference type="OMA" id="DHQYGRW"/>
    <dbReference type="OrthoDB" id="1654295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WYL" evidence="1">
        <location>
            <begin position="233"/>
            <end position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="441" mass="51764" checksum="D01EB01D99540702" modified="2011-01-11" version="1">MARESFDKEIQFLRMLTLTSGAYNRQQFADRLGISVHTFDKTIRRLKEIVQSVQQQLPAEQGHDFNEMLRFNYYESADPLLLFLFRAKSLKESESVRLSLLLTALQSQSMTTMELLDACCNGLPSDSSLPDEKTIRSDLKYLVEVGVVRKEPGGRPYRYAVRNDLVTELTDEELLDLYDFVDIMANTQLPSVQGYLLRDHLKKAMRRQLGDREMAEPFLYKYHYYSRILDEAHIHPLLHAIRQRRCVSFLYYSASKRSMYGSQNTNPRFEKETEGREHTILPLQVIYDHQYGRWYVLGHVGGKGIMKFRMEGMTQLVEGKPVPEQLYADLLAVLEEKMRYSWLVDTGRPVKVRVRFFNPEGAKRNFIRERVLSQGQWGAITEEESESFIYEITVNGITEIKPWIRSFGSSCEVLEPQRLRKEFRQEWKELQAYYEPVRENI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDK8</accession>
    <name>E3EDK8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ohr subfamily peroxiredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ohrA1</name>
        <name evidence="2" type="ORF">PPSC2_06440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the OsmC/Ohr family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369947.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19405"/>
    <dbReference type="EnsemblBacteria" id="ADO55316">
        <property type="protein sequence ID" value="ADO55316"/>
        <property type="gene ID" value="PPSC2_06440"/>
    </dbReference>
    <dbReference type="GeneID" id="66573651"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06440"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1327"/>
    <dbReference type="eggNOG" id="COG1764">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_106355_2_1_9"/>
    <dbReference type="OMA" id="TPEKGFK"/>
    <dbReference type="OrthoDB" id="1984062at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019953">
        <property type="entry name" value="OHR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33797">
        <property type="entry name" value="PTHR33797"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03561">
        <property type="entry name" value="organ_hyd_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="139" mass="14527" checksum="306ADD9660DB315B" modified="2011-01-11" version="1">MEALYTASATVHGGRDGSVASSDGVLKHKLSTPKELGGAGGDATNPEQLFAAGYGACYESALANVARKAKVKVDNVEVTSHVSIGKDPSDGGFQLAVRLDVKIPGIERSQAEDLARQAHDFCPYSKATRGNIDVELNVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="68" xmlns="http://uniprot.org/uniprot">
    <accession>E3EDY7</accession>
    <name>E3EDY7_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Cysteine synthase</fullName>
            <ecNumber evidence="5 11">2.5.1.47</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">cysK1</name>
        <name evidence="13" type="ORF">PPSC2_00320</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>hydrogen sulfide + O-acetyl-L-serine = acetate + L-cysteine</text>
            <dbReference type="Rhea" id="RHEA:14829"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:58340"/>
            <dbReference type="EC" id="2.5.1.47"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9 11">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-cysteine biosynthesis; L-cysteine from L-serine: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the cysteine synthase/cystathionine beta-synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.47" evidence="5 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368700.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13335"/>
    <dbReference type="EnsemblBacteria" id="ADO54053">
        <property type="protein sequence ID" value="ADO54053"/>
        <property type="gene ID" value="PPSC2_00320"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00320"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.63"/>
    <dbReference type="eggNOG" id="COG0031">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021018_1_0_9"/>
    <dbReference type="OMA" id="FWDSGER"/>
    <dbReference type="OrthoDB" id="1033353at2"/>
    <dbReference type="UniPathway" id="UPA00136">
        <property type="reaction ID" value="UER00200"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004124">
        <property type="term" value="F:cysteine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005856">
        <property type="entry name" value="Cys_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005859">
        <property type="entry name" value="CysK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001216">
        <property type="entry name" value="P-phosphate_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01139">
        <property type="entry name" value="cysK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01136">
        <property type="entry name" value="cysKM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00901">
        <property type="entry name" value="CYS_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 11" id="KW-0198">Cysteine biosynthesis</keyword>
    <keyword evidence="7 9 11" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PALP" evidence="12">
        <location>
            <begin position="8"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="9">
        <location>
            <begin position="182"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="270"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="10">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR605856-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR605856-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="312" mass="33370" checksum="B8D551482FBD6463" modified="2011-01-11" version="1">MAKVVNNITDLIGETPLVRLNRIVPEDSAEIYLKLEYQNPGSSVKDRIAISMVEEAEREGLLKPGGTIIEATSGNTGIGLAMVAAAKGYKAVIVMPETMSIERRNLLRAYGAELVLTPGSEGMNGSVKKMEELLSENPDYFAAEQFKNKANIKIHRETTGPEIVEAIRSIGGTLDAFIAGIGTGGTISGAGEVLKKEFPDIKIVAVEPASSPLLAGGKPGPHKIQGLGANFIPEILNRDIYDEIIHVENDEAFEVARRVAKEEGILSGISSGAAVHAALKLAKQLGKGKRIVVIIPSNGERYLSTPLYNFEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>E3EE06</accession>
    <name>E3EE06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">6-phosphogluconolactonase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ykgB1</name>
        <name evidence="3" type="ORF">PPSC2_02655</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cycloisomerase 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369126.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15420"/>
    <dbReference type="EnsemblBacteria" id="ADO54486">
        <property type="protein sequence ID" value="ADO54486"/>
        <property type="gene ID" value="PPSC2_02655"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02655"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.495"/>
    <dbReference type="eggNOG" id="COG2706">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038716_5_1_9"/>
    <dbReference type="OMA" id="KQPRNIA"/>
    <dbReference type="OrthoDB" id="302683at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011048">
        <property type="entry name" value="Haem_d1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019405">
        <property type="entry name" value="Lactonase_7-beta_prop"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10282">
        <property type="entry name" value="Lactonase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51004">
        <property type="entry name" value="SSF51004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="135"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO54486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="350" mass="38257" checksum="D817ABB01ED45643" modified="2011-01-11" version="1">MKERNEQLFYIGTYASREERGIYIGSLHTDNGDLRMVGGVEGIERPSFLALHPNGAKLYAASETDQGELYTYQVNNQTGELHPLDRKGTEGAHTCYVSVTTDGRYVLASNYSGGNAVVFPATVAGGLGDMSGQVQHTGSGIRQDRQDTPHPHSIIPDPSGQYAMVCDLGLDQIIGYRLTEDGKLVTHRETDLPPGSGPRHLVFHPSGRYAFVANELNNTVTVFGYNERNGKLTLLQSLSTLPEGIIDVENTAADIRITPCGRFLYVSNRGHDSIVLYHVDLDSGKLKTIEWVETFGSTARNFNILSGYLLVANQEGNNVVSFAIHGDDGRLTRTGYVLEVPSPVCIEPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="40" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEF7</accession>
    <name>E3EEF7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_06865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370039.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1429"/>
    <dbReference type="EnsemblBacteria" id="ADO55408">
        <property type="protein sequence ID" value="ADO55408"/>
        <property type="gene ID" value="PPSC2_06865"/>
    </dbReference>
    <dbReference type="GeneID" id="66573565"/>
    <dbReference type="KEGG" id="ppm:PPSC2_06865"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1415"/>
    <dbReference type="eggNOG" id="ENOG502ZQYD">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_200491_0_0_9"/>
    <dbReference type="OMA" id="EPEADEW"/>
    <dbReference type="OrthoDB" id="2019826at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="59" mass="6653" checksum="6EE15A9060BADE2A" modified="2011-01-11" version="1">MSDHTQDEAKIRNKKNEDGDSLMEKTKLDNGVDIEPEADEWIAKPSPVSYDDTKSSSQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEQ1</accession>
    <name>E3EEQ1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pstB5</name>
        <name evidence="6" type="ORF">PPSC2_08340</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370358.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20945"/>
    <dbReference type="EnsemblBacteria" id="ADO55738">
        <property type="protein sequence ID" value="ADO55738"/>
        <property type="gene ID" value="PPSC2_08340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1753"/>
    <dbReference type="eggNOG" id="COG1117">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="TIDICRV"/>
    <dbReference type="OrthoDB" id="1416748at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015415">
        <property type="term" value="F:ATPase-coupled phosphate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03260">
        <property type="entry name" value="ABC_PstB_phosphate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015850">
        <property type="entry name" value="ABC_transpr_PstB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005670">
        <property type="entry name" value="Phosp_transpt1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43423">
        <property type="entry name" value="PTHR43423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43423:SF3">
        <property type="entry name" value="PTHR43423:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00972">
        <property type="entry name" value="3a0107s01c2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="6"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO55738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="252" mass="28327" checksum="40CE212CC82BC70C" modified="2011-01-11" version="1">MNDSVIRIDKLNLYYEKFHALKHINLDIPEKTVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEGTVSIAGQDIYGDTMEVEMLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRQKDKLDELVEQSLRQAALWEEVKNFLKRSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPISTMKIEELVQELRDTYTIVMVTHNMHQAARVSGRTAFFLNGVVVEAADTETMFSTPQDSRTEDYISGRFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EEW2</accession>
    <name>E3EEW2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yjcK1</name>
        <name evidence="2" type="ORF">PPSC2_00495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013368731.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_13500"/>
    <dbReference type="EnsemblBacteria" id="ADO54085">
        <property type="protein sequence ID" value="ADO54085"/>
        <property type="gene ID" value="PPSC2_00495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_00495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.96"/>
    <dbReference type="eggNOG" id="COG1670">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013985_40_1_9"/>
    <dbReference type="OMA" id="CGFQPEG"/>
    <dbReference type="OrthoDB" id="1501005at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="12"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="185" mass="21406" checksum="C751633689820213" modified="2011-01-11" version="1">MPMSLYNTPQGIFLRPLSLEDGEALLALRLRNRDSHAPYEPLYEDSFFTLEKQQDYIRERLRQAEEDRGYLFGIFLLKQEQLIGYISISNLVRGVGQFADVGYMMDQHEQGKGHMTAALKLIIQYAFRALSLHRLQAGTLLHNDRSQRVLQKCGFQPEGIARKLVQIQGEWQDHQMFGILAEDHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF10</accession>
    <name>E3EF10_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">slyA1</name>
        <name evidence="2" type="ORF">PPSC2_02845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54530.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014599429.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0546"/>
    <dbReference type="EnsemblBacteria" id="ADO54530">
        <property type="protein sequence ID" value="ADO54530"/>
        <property type="gene ID" value="PPSC2_02845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.541"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_35_3_9"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="17"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54530.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="151" mass="16668" checksum="0103DF0EB56E2D63" modified="2015-05-27" version="2">MTASRKDKKTSQNNSPSVCTCINLRRASMAVTGLYDQYLAPSGLNISQFSLLKHLTVLGPVSVSELALEMRLDRTTLVRNLKALEQSGYVEDTSAEGSRNRCLTLTESGKALYNDAAELWEEAQLFLQESLGSADLQILTTLLSKIEKLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF18</accession>
    <name>E3EF18_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Endoribonuclease L-PSP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhaR</name>
        <name evidence="2" type="ORF">PPSC2_02880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RutC family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013308546.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15695"/>
    <dbReference type="EnsemblBacteria" id="ADO54538">
        <property type="protein sequence ID" value="ADO54538"/>
        <property type="gene ID" value="PPSC2_02880"/>
    </dbReference>
    <dbReference type="GeneID" id="66574393"/>
    <dbReference type="KEGG" id="ppm:PPSC2_02880"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.548"/>
    <dbReference type="eggNOG" id="COG0251">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_100715_7_1_9"/>
    <dbReference type="OMA" id="GSYFKEP"/>
    <dbReference type="OrthoDB" id="1850770at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006056">
        <property type="entry name" value="RidA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019897">
        <property type="entry name" value="RidA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11803">
        <property type="entry name" value="PTHR11803"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00004">
        <property type="entry name" value="TIGR00004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01094">
        <property type="entry name" value="UPF0076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO54538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="126" mass="13469" checksum="C619E7334BB6CB70" modified="2011-01-11" version="1">MKKTIATEKAPGAIGPYSQAVEAGGFIYTSGQLGLNPATGEFGKDVQEQARLSLSNVQAILEAAGSNMNQVVKATVFLKDMNDFVSVNEVYSSFFEQPYPARSAVEVARLPKDALVEIEVIALKGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF26</accession>
    <name>E3EF26_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">amyD1</name>
        <name evidence="7" type="ORF">PPSC2_02920</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369185.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15735"/>
    <dbReference type="EnsemblBacteria" id="ADO54546">
        <property type="protein sequence ID" value="ADO54546"/>
        <property type="gene ID" value="PPSC2_02920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_02920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.555"/>
    <dbReference type="eggNOG" id="COG1175">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_016047_0_0_9"/>
    <dbReference type="OMA" id="FGNNQFF"/>
    <dbReference type="OrthoDB" id="1688736at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="156"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="205"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="261"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="71"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO54546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="293" mass="33021" checksum="8687002011837246" modified="2011-01-11" version="1">MNRAKSSQWLQQWIFVGPSTLFFVIIIVIPFMLGMYYSFTEWNGVANQAKWVGLDNFSHILFNDDKFGTAFWFTVRFTVIGVVAANIFGFLLAYFLTKPLKTKNVLRTIFFMPNVIGGLLLGFIWQFIFVKGFAAIGESTGLSFFNLSWLGDEITAFWGIVIVFIWQTAGYLMVIYISSLTNVPRDMLEAAEIDGASRMQILRSIILPLIMPAITVCLFLAISWSFKMFDLNLSLTKGGPFGSTESVALNIYNEAFVNNRYGLGTAKALIFFIIVALVTSLQVRLTKSREVES</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="74" xmlns="http://uniprot.org/uniprot">
    <accession>E3EF47</accession>
    <name>E3EF47_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Threonine--tRNA ligase</fullName>
            <ecNumber evidence="10">6.1.1.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Threonyl-tRNA synthetase</fullName>
            <shortName evidence="10">ThrRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">thrS</name>
        <name evidence="13" type="ORF">PPSC2_03015</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + H(+) + L-threonyl-tRNA(Thr)</text>
            <dbReference type="Rhea" id="RHEA:24624"/>
            <dbReference type="Rhea" id="RHEA-COMP:9670"/>
            <dbReference type="Rhea" id="RHEA-COMP:9704"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78534"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.3" evidence="10"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369206.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_15830"/>
    <dbReference type="EnsemblBacteria" id="ADO54567">
        <property type="protein sequence ID" value="ADO54567"/>
        <property type="gene ID" value="PPSC2_03015"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_03015"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.575"/>
    <dbReference type="eggNOG" id="COG0441">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_008554_0_1_9"/>
    <dbReference type="OMA" id="DAHIFML"/>
    <dbReference type="OrthoDB" id="900765at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004829">
        <property type="term" value="F:threonine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006435">
        <property type="term" value="P:threonyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00771">
        <property type="entry name" value="ThrRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00184">
        <property type="entry name" value="Thr_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002320">
        <property type="entry name" value="Thr-tRNA-ligase_IIa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033728">
        <property type="entry name" value="ThrRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11451">
        <property type="entry name" value="PTHR11451"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01047">
        <property type="entry name" value="TRNASYNTHTHR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="SSF55186"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00418">
        <property type="entry name" value="thrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 10 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 10" id="KW-0820">tRNA-binding</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="TGS" evidence="12">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="11">
        <location>
            <begin position="270"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="336"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="387"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="512"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO54567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="637" mass="72502" checksum="0A1712248E4B1D1A" modified="2011-01-11" version="1">MSIQVKLPDGAVREYEQGVTIADVAGSISSGLKKNAVAGKVNGKAVDLNTVLDENVDLEIITLDGADGLEIYRHSTAHLLAQALKRIYGEKNVKLGIGPVIDSGFYYDIDIENPLSVDDLAKIEKEMAKITQENLPITRRVVSREEATRIFGEMEDPLKLELIRDLPEEAEITIYDQGEFFDLCRGPHLPSTGRIKAFKLLSVAGAYWRGDSNNKMLQRIYGTAFPKKAQLDEHLHLLEEAKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLMMNNRLWEQSGHYEHYKENMYFSEVDETTFALKPMNCPGHMLVFKNELHSYRDLPIRISEFGQVHRHELSGALNGMMRVRTFCQDDAHIFVTPGQIEKEITDVIKLINEMYSVFGFDFTVELSTRPDDFMGEPALWDQAEQALQNVLDHLGINYRINAGDGAFYGPKIDFHILDALKRSWQCGTIQLDFQMPEKFDLTYVGEDNQKHRPVVIHRAIYGSIDRFMGILTEHFTGAFPLWLAPVHAKLLPVSENYIETANEVQEALLKAGLRVEVDTRNEKLGYKIREAQLEKVPYMFVIGENEKTTGTVAVRKRGEGDLGSFSIADIVEKISTEIHEKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFE6</accession>
    <name>E3EFE6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">araG</name>
        <name evidence="5" type="ORF">PPSC2_05480</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369742.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_18390"/>
    <dbReference type="EnsemblBacteria" id="ADO55109">
        <property type="protein sequence ID" value="ADO55109"/>
        <property type="gene ID" value="PPSC2_05480"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05480"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1113"/>
    <dbReference type="eggNOG" id="COG1129">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_92_3_9"/>
    <dbReference type="OMA" id="LPGGRMH"/>
    <dbReference type="OrthoDB" id="551294at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="262"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="516" mass="56629" checksum="851919D2FCA4C19C" modified="2011-01-11" version="1">MTGIILEMKGITKTFPGVKALENVNLKVKEGEIHSLCGENGAGKSTLMKVLSGVYSHGTYEGDIIFQGKTCEFKDIKQSEELGIVIIHQELALIPYLSIAENIYLGNERASGGVIDWKETFVGTRDLLSKVGLSENPNTLVTNIGVGKQQLVEIAKALSKKVKLLILDEPTAALNEDDSENLLNLMLEFKKQGISCILISHKLNEVAKVSDSITILRDGKTIETLDMKKDEVTEDRIISGMVGRDLTSRYPERHAKIGKVVLEVKDWTVYHEHHADRKVLDQVNLNIRSGEIVGIAGLMGAGRTELAMSIFGKSYGRNISGQLIKDGKPIQNNTVTDAINNGFAYVTEDRKEYGLILMDDIKRNISLTGLSKLTKGAVVNEQEEVVVAEEMKKSMNIKAPSILQKTGNLSGGNQQKVVLSKWIFAGPDILILDEPTRGIDVGAKYEIYTIIHRLAAEGKGVLVISSELPEVLGLCDRIYVMNAGRITGEVSREDASQETLMRYMTKSGGVKHGNHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFI9</accession>
    <name>E3EFI9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_07195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370107.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20175"/>
    <dbReference type="EnsemblBacteria" id="ADO55480">
        <property type="protein sequence ID" value="ADO55480"/>
        <property type="gene ID" value="PPSC2_07195"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07195"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1486"/>
    <dbReference type="eggNOG" id="ENOG502ZFQE">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_2790034_0_0_9"/>
    <dbReference type="OMA" id="FLRNEMM"/>
    <dbReference type="OrthoDB" id="1972522at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043937">
        <property type="term" value="P:regulation of sporulation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018540">
        <property type="entry name" value="Spo0E-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037208">
        <property type="entry name" value="Spo0E-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09388">
        <property type="entry name" value="SpoOE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140500">
        <property type="entry name" value="SSF140500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO55480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="68" mass="8032" checksum="317C624275C2F7AD" modified="2011-01-11" version="1">MSYVGYKSPSSIGYDISLEDEILFLRNEMMRTFQEEQSFTSDLVIEISCKLDLKINEYMKLYGMECRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFN0</accession>
    <name>E3EFN0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cotS</name>
        <name evidence="2" type="ORF">PPSC2_07385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370148.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20365"/>
    <dbReference type="EnsemblBacteria" id="ADO55521">
        <property type="protein sequence ID" value="ADO55521"/>
        <property type="gene ID" value="PPSC2_07385"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07385"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1527"/>
    <dbReference type="eggNOG" id="COG2334">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_042636_2_0_9"/>
    <dbReference type="OMA" id="CHGDYVN"/>
    <dbReference type="OrthoDB" id="1003984at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="27"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="298" mass="35116" checksum="B391A7AEBD4F3B00" modified="2011-01-11" version="1">MSILSNVEQMYGIKIQRSRQMKDIHKIETANTTYCLKPYKFPEEEIRFITRVLSYLDERGFTRSQKVYPTVQQTAYMTYEGVSYTLTNWVHGPRPEFTKRIDFKKGISTLAKFHTSAVGFPVTEAPPSRIRYEGLSDEIAEYKKRLSPYKGTAHLLALCEEVLYRLQQPKIRAAIQQEQKAAALIHGDYNYPNLVKDRQLKIHLIDFENCSLHVRMKDLSHLLHRNCLWNATKMLRAIEFYQRYRPLSTQDLHLLHMLLISPYHVVRNLRIGGFRSAKRVIPSFVHLNKYRRELRSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EFS0</accession>
    <name>E3EFS0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydeE1</name>
        <name evidence="3" type="ORF">PPSC2_08590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55792.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_025677044.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1820"/>
    <dbReference type="EnsemblBacteria" id="ADO55792">
        <property type="protein sequence ID" value="ADO55792"/>
        <property type="gene ID" value="PPSC2_08590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1809"/>
    <dbReference type="eggNOG" id="COG2207">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG3708">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_81_1_9"/>
    <dbReference type="OrthoDB" id="1748122at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010499">
        <property type="entry name" value="AraC_E-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029442">
        <property type="entry name" value="GyrI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06445">
        <property type="entry name" value="GyrI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00871">
        <property type="entry name" value="AraC_E_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55792.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="33069" checksum="8CE2DA76250EC815" modified="2015-05-27" version="2">MDLLKSMNEAIRYIEENLTNEIDFKEVARLAYCSEFHFKRMFSFLAGATLSEYIRRRRLTLAAFELKDSNVKVIDIAIKYGYNSPDSFTRAFQNLHGLTPSEARINGRSLKAYPRMTFQLSIKGGSEMNYRIEEKGAFRIVGIQKRVPIIFNGVNPEIAAMWESLDGETINNLKRISNVEPMGLLSASTNFSEGRMEEKGGLDHYIGVATTKECPDNLTQLEVAASTWAVFEAIGSFPDTLQDVWGRIYSEWFPSSNYEQIEGPEILWNESKDITSPTFKSEIWIPILKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="62" xmlns="http://uniprot.org/uniprot">
    <accession>E3EG26</accession>
    <name>E3EG26_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellar hook-basal body complex protein FliE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">fliE</name>
        <name evidence="4" type="ORF">PPSC2_09850</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 3">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the FliE family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007430020.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22320"/>
    <dbReference type="EnsemblBacteria" id="ADO56059">
        <property type="protein sequence ID" value="ADO56059"/>
        <property type="gene ID" value="PPSC2_09850"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_09850"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2076"/>
    <dbReference type="eggNOG" id="COG1677">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_147249_3_0_9"/>
    <dbReference type="OMA" id="LHDVMIT"/>
    <dbReference type="OrthoDB" id="1581972at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00724">
        <property type="entry name" value="FliE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001624">
        <property type="entry name" value="FliE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34653">
        <property type="entry name" value="PTHR34653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02049">
        <property type="entry name" value="FliE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01006">
        <property type="entry name" value="FLGHOOKFLIE"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00205">
        <property type="entry name" value="fliE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="104" mass="11662" checksum="7DEAC876E15DD420" modified="2011-01-11" version="1">MIQNAMFNVQTPVIQQIQSPNNELTKATPSESLKDFGSFLKDALNEVGQQEAATHQMSDQFMAGKVDVDQVMITSQQALLSLQLTTQVRNKAIEAYQEIMRTQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGL8</accession>
    <name>E3EGL8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid transporter LysE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lysE1</name>
        <name evidence="6" type="ORF">PPSC2_03420</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO54657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369294.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c0674"/>
    <dbReference type="EnsemblBacteria" id="ADO54657">
        <property type="protein sequence ID" value="ADO54657"/>
        <property type="gene ID" value="PPSC2_03420"/>
    </dbReference>
    <dbReference type="GeneID" id="66574290"/>
    <dbReference type="KEGG" id="ppm:PPSC2_03420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.667"/>
    <dbReference type="eggNOG" id="COG1280">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079569_1_2_9"/>
    <dbReference type="OMA" id="NPKAWIM"/>
    <dbReference type="OrthoDB" id="1945085at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO54657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="193" mass="21983" checksum="DC0FFBE0A47EB17C" modified="2011-01-11" version="1">MPFIPFLSYVLVTSFTPGPNNIMSLDSARRLGLKRAFPFLLGVTAGCFAIMLLACYFNLALYHFLPRVKIWMNVLGSLYMLYLAVKIAKSKSTSEDNDHNEGYSFKSGLLLQFINLKIILYGITVISTFVMPYDVSYMTMFTISLLLTCIGFVAVMCWAIFGAMFQRFLNKYERSFNIIMALLLLYSALSIWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="48" xmlns="http://uniprot.org/uniprot">
    <accession>E3EGS4</accession>
    <name>E3EGS4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">1,4-beta-N-acetylmuramidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">acm1</name>
        <name evidence="5" type="ORF">PPSC2_05710</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 25 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369790.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c1178"/>
    <dbReference type="CAZy" id="GH25">
        <property type="family name" value="Glycoside Hydrolase Family 25"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO55158">
        <property type="protein sequence ID" value="ADO55158"/>
        <property type="gene ID" value="PPSC2_05710"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05710"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1164"/>
    <dbReference type="eggNOG" id="COG3757">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_887683_0_0_9"/>
    <dbReference type="OMA" id="IDWTHRY"/>
    <dbReference type="OrthoDB" id="1444566at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003796">
        <property type="term" value="F:lysozyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002053">
        <property type="entry name" value="Glyco_hydro_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018077">
        <property type="entry name" value="Glyco_hydro_fam25_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01183">
        <property type="entry name" value="Glyco_hydro_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00641">
        <property type="entry name" value="Glyco_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51904">
        <property type="entry name" value="GLYCOSYL_HYDROL_F25_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="227"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="321" mass="35374" checksum="A6757CE541D65892" modified="2011-01-11" version="1">MQNRSPNAAEGIDVSRYQGTIDWKRVRADGKSFAFIKASQGQRYVDPTFITNAKGIKAAGLLLGAYHFVDATSVNAAKAEARHFAEVLDQVGGAKALDLPAVMDYENNPGKLNSAAIHEVALAFLTEFERVSGRKPMVYTGNAFAAHFKALLGSYKLWIARYSTRVPSDTTAWRRWDFWQYSDSGRVDGIQGPVDLNVYAGTEAELRQAFAGEEGEEPMTAEEKAAFKALQQQVTTLENSRDVLKQTLNEQSAYIKKVDQRVAELEARQAMPVPAWAKEAMVAAVAVNPASPIVDAKLPSSYDFYRLLVVLNRLGAFKTTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH06</accession>
    <name>E3EH06_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Fe3+-siderophore ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fhuB5</name>
        <name evidence="8" type="ORF">PPSC2_07595</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370193.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_20560"/>
    <dbReference type="EnsemblBacteria" id="ADO55566">
        <property type="protein sequence ID" value="ADO55566"/>
        <property type="gene ID" value="PPSC2_07595"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_07595"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1570"/>
    <dbReference type="eggNOG" id="COG0609">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_013016_7_2_9"/>
    <dbReference type="OMA" id="MFPYQIP"/>
    <dbReference type="OrthoDB" id="1283908at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="101"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="127"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="157"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="239"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="284"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="316"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="359"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="413"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="440"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="467"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="494"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="538"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="585"/>
            <end position="616"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="628"/>
            <end position="649"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="655"/>
            <end position="674"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO55566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="682" mass="71565" checksum="49DDF25190E46D9B" modified="2011-01-11" version="1">MTRTDTTGLSKTWRIGSIFGGGLLVLIVLFFVSLCYGEASIPLHTVIEALTQRQDTLEHNMVWDLRMPRTVIGILAGGALAIAGALLQAITKNPLAASDTLGINAGAYFVVVLGAVMFPGLLHQAPFLFAAAGGLLAAVLAYFMGGGRAGTPIRLALAGLIVSMVLGSFTGALHIFYSFETQGLFLWGSGSLVQNDWSGTTYAWPWVVGLSVIAVMLSRQFDVLDLDESTSTSLGQKVSLTRAVGIVLAVLLSTITVSVIGPIGFVGLVAPHLVRLSGLKMHRWVLPGSFLWGALLLIGADVLAKMVHKSSMDLPTGAVMALIGAPWLIWLILWKMKLPSGIGGQSSMNIGVRSRKLPFGRLVTIFACCAVILTVFSLMFGGMRIPVGDLLSGLFGGENANSALLQFRIPRTLVAAGAGIALAVSGVLIQLAVRNPLADASIIGVSSGAGIGALAVIIVWPGLPIYMLPIAAIAGATVSAAVIFFLSWNKQLNPSVVILLGIAVSAIGSAGIQVLIIQGSLWGSTGYIWLTGSTYARNWGQVATILAFLLVLLPVAWWLARRFDLLVFDDGSAMGLGLPVRRTRLLAMVVGVLLAGGAVACVGTIGFIGLIAPHIVRTLIGHHVRRSIVLSSILGAVMLVLADTIGRTVLAPTEIPSGLLIALIGAPYFLYLMYRSNKSKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EH07</accession>
    <name>E3EH07_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arsR3</name>
        <name evidence="2" type="ORF">PPSC2_07600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55567.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
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        <property type="protein sequence ID" value="ADO55567"/>
        <property type="gene ID" value="PPSC2_07600"/>
    </dbReference>
    <dbReference type="GeneID" id="66573419"/>
    <dbReference type="KEGG" id="ppm:PPSC2_07600"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1571"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="1"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO55567.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="12077" checksum="32D600946093C76C" modified="2015-05-27" version="2">MEPSLIYKALSNETRRLIMQWLKKPEDYFDEQAYLKQGLNFQIGVCVGDIQAKSGLAQSVISSYLLTMQKSGLLESERVGKWTYYRRNEKTIQEFAEYIQKEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="47" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHA7</accession>
    <name>E3EHA7_PAEPS</name>
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        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">adrA</name>
        <name evidence="3" type="ORF">PPSC2_09090</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="gene ID" value="PPSC2_09090"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="1635706at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
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    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
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        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
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        <location>
            <begin position="110"/>
            <end position="128"/>
        </location>
    </feature>
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            <begin position="140"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="258"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO55898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="393" mass="44272" checksum="6B8EBA8F9BA01709" modified="2011-01-11" version="1">MLTLLSLLGTLGSPSLAGAISAACGLYIILMMALMCVIIYSRQRKKAYILFSVAAIFIMTYEAMNLYSAGGGQMQLQGIVWKNALEAFAFLLINAAVFQLYRKLKRVEKWALLLLAALLILPVMAWTLGLLPTWISSVKLVGFTLFYRVLVLILSLLFITPRIGQPKKFIAGLFTYSLWLGFLWLQNDIPEEANGSSTVLWMSFLPLLYYTTLFIILFERIVELLQRIYRSSITDGLTGLYNRKYFSGRLRRYMDQGIRVSVIFCDIDNFKKLNDTQGHARADEVLKQVAQIMEEELDEIGLTGRYGGEELVAMVVDRRAKVAQVAERIRERVAEESIVTISVGHSTAKKEINPDELVKQADQAMYISKTTGKNKVTAYKAAEVKQSRAARAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHG6</accession>
    <name>E3EHG6_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Polyribonucleotide nucleotidyltransferase</fullName>
            <ecNumber evidence="6">2.7.7.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Polynucleotide phosphorylase</fullName>
            <shortName evidence="6">PNPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">pnp</name>
        <name evidence="8" type="ORF">PPSC2_10130</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>phosphate + RNA(n+1) = a ribonucleoside 5'-diphosphate + RNA(n)</text>
            <dbReference type="Rhea" id="RHEA:22096"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the polyribonucleotide nucleotidyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.8" evidence="6"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370728.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22600"/>
    <dbReference type="EnsemblBacteria" id="ADO56119">
        <property type="protein sequence ID" value="ADO56119"/>
        <property type="gene ID" value="PPSC2_10130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2135"/>
    <dbReference type="eggNOG" id="COG1185">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_004217_2_2_9"/>
    <dbReference type="OMA" id="LHILDVM"/>
    <dbReference type="OrthoDB" id="122725at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004654">
        <property type="term" value="F:polyribonucleotide nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01595">
        <property type="entry name" value="PNPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015847">
        <property type="entry name" value="ExoRNase_PH_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036345">
        <property type="entry name" value="ExoRNase_PH_dom2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012162">
        <property type="entry name" value="PNPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015848">
        <property type="entry name" value="PNPase_PH_RNA-bd_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036456">
        <property type="entry name" value="PNPase_PH_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11252">
        <property type="entry name" value="PTHR11252"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00013">
        <property type="entry name" value="KH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03726">
        <property type="entry name" value="PNPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03725">
        <property type="entry name" value="RNase_PH_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005499">
        <property type="entry name" value="PNPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46915">
        <property type="entry name" value="SSF46915"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="SSF54791"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55666">
        <property type="entry name" value="SSF55666"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03591">
        <property type="entry name" value="polynuc_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S1 motif" evidence="7">
        <location>
            <begin position="621"/>
            <end position="689"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="485"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="491"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01595"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO56119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="700" mass="76541" checksum="DEA1A0BB998DB4C6" modified="2011-01-11" version="1">MEQRVEMQLGGRKLVLETGRLAKQANAAVKVSYGETVVLCTVTASREPKDLDFFPLTVNYEERLYAVGKIPGGFIKREGRPSQKAILSSRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQDCEPEIAAMIGTSAALSISDVPFNGPIGGVAVGRVNGQFVINPDIAQQNTSDLYLVVAGTKDAIMMVEAEGDEIPEEVMLEAIMFGHDEIKNIVAVIEQLVQVAGKEKMQVKLHAVDEKVNSEVRAYAADRLVEAVKIAEKHARQEAIDAVNEETVAHFEAQYIETPELLSDVSEVLYDIVKEEVRRLITHDKVRPDGRKLDEIRPIESDTSILPRTHGSGLFTRGQTQALSVCTLGALGDVQILDGIDLEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGDHVSVLTDIQGMEDHLGDMDFKVAGTAEGVTAIQMDIKIDGIDRNILQDALKQAREGRLFILGKMMEAIQKPREQLSPYAPKIMTMHINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASTNQEMNEKARSIIEGIVKEVVVGEIYIGTVKRIEKFGAFVEILPGKDGLVHISQLSTERVAKVEDVIAIGDTITVKVTEIDQQGRVNLSRKAVLTAEAPAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHH6</accession>
    <name>E3EHH6_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Translocation-enhancing protein TepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tepA</name>
        <name evidence="3" type="ORF">PPSC2_10180</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S14 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370738.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_22650"/>
    <dbReference type="EnsemblBacteria" id="ADO56129">
        <property type="protein sequence ID" value="ADO56129"/>
        <property type="gene ID" value="PPSC2_10180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2145"/>
    <dbReference type="eggNOG" id="COG0740">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_066827_1_0_9"/>
    <dbReference type="OMA" id="KMQDRVI"/>
    <dbReference type="OrthoDB" id="1399458at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001907">
        <property type="entry name" value="ClpP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023562">
        <property type="entry name" value="ClpP/TepA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00574">
        <property type="entry name" value="CLP_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00127">
        <property type="entry name" value="CLPPROTEASEP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="246"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="282" mass="30421" checksum="51A1C71395108C5A" modified="2011-01-11" version="1">MEHYSNFSSGNEETEAPEQPEVGQRPVLPAMEALQQLGQTSMPGSESNIFCMTIIGQIEGHLILPPQNKTTKYEHIIPQLVAAEQNPRIEGLMILLNTVGGDVEAGLAIAEMIASMSKPTVTIVIGGGHSIGVPIAVSSTYSYIAESATMTIHPIRMSGLVIGVPQTFEYMEKMQERVVRFVVSHSRITEERFKELMFKTGELNRDIGTAVGGIDAVKYGLMDAVGGIGEALKQLNTIIEARRQQNGMTGTPQQSPYAPFSPNATGVPTGTPSSEHSKELPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHM9</accession>
    <name>E3EHM9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FMN reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ssuE</name>
        <name evidence="2" type="ORF">PPSC2_10900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370897.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23290"/>
    <dbReference type="EnsemblBacteria" id="ADO56291">
        <property type="protein sequence ID" value="ADO56291"/>
        <property type="gene ID" value="PPSC2_10900"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_10900"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2308"/>
    <dbReference type="eggNOG" id="COG0431">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_055322_3_0_9"/>
    <dbReference type="OMA" id="DVEVCHW"/>
    <dbReference type="OrthoDB" id="796211at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008752">
        <property type="term" value="F:FMN reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046306">
        <property type="term" value="P:alkanesulfonate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020048">
        <property type="entry name" value="NADPH-dep_FMN_reduc_SsuE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03567">
        <property type="entry name" value="FMN_reduc_SsuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN_red" evidence="1">
        <location>
            <begin position="3"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="176" mass="18826" checksum="E2D0C59FC941FF6E" modified="2011-01-11" version="1">MSKVVILSGSPSTQSRLYGLIHYTTEQLREAGAEVTLLNVVDLPAEDLIKANFNSPDVTAALALIAAADAVIVASPVYKAAYSGLLKIFLDLVPQEGLRGKPVLPLFIGGTLAHLLVIDYALKPVLSALGGRHILGGVYAVDQWVERLPGGAYGLSEELIVRLERSVKELNELLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHT7</accession>
    <name>E3EHT7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fe3+-hydroxamate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hmuT</name>
        <name evidence="4" type="ORF">PPSC2_11165</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370954.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23560"/>
    <dbReference type="EnsemblBacteria" id="ADO56349">
        <property type="protein sequence ID" value="ADO56349"/>
        <property type="gene ID" value="PPSC2_11165"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11165"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2364"/>
    <dbReference type="eggNOG" id="COG0614">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038034_7_2_9"/>
    <dbReference type="OMA" id="YELSESC"/>
    <dbReference type="OrthoDB" id="1473468at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168460" evidence="2">
        <location>
            <begin position="39"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="3">
        <location>
            <begin position="72"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADO56349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="340" mass="37294" checksum="4005460CA6A2E77B" modified="2011-01-11" version="1">MNKYSKPALPLVMLALAMMLLLSACTAGNTAQTTNSSANGQQPDASQSTAQEKAVEIENMGVKMIFPEAPKRAVTLNQHATEVMLALGLESSMVGTAYLDDQILPKYKNQYDKIPVLAKQYPSKEVFMAAAPDFAYAGWKSAFNDKNLGSREELAQQGVQTYVQESSNKPGPILEDVYRDILNIGRIFRVEERAEKLVNDIRAQVQSIQTQIGTVERAPKVFVYDSGEDKPFTAANNYLTSLITSVKAKNIFDDIDKSFTEVSWEEVVNRNPDVIIILDYGDTSLADKEKLLLSKPALAGVEAIKNKRFVVLPLSAAAEGVRAPIALKTLAVGLYPDKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHW1</accession>
    <name>E3EHW1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">truA1</name>
        <name evidence="5" type="ORF">PPSC2_11665</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RsuA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371058.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2482"/>
    <dbReference type="EnsemblBacteria" id="ADO56453">
        <property type="protein sequence ID" value="ADO56453"/>
        <property type="gene ID" value="PPSC2_11665"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11665"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2468"/>
    <dbReference type="eggNOG" id="COG1187">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_024979_1_2_9"/>
    <dbReference type="OMA" id="LMHPDFG"/>
    <dbReference type="OrthoDB" id="1037615at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120159">
        <property type="term" value="F:rRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042092">
        <property type="entry name" value="PsdUridine_s_RsuA/RluB/E/F_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000748">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB/E/F"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018496">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020094">
        <property type="entry name" value="TruA/RsuA/RluB/E/F_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00093">
        <property type="entry name" value="TIGR00093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01149">
        <property type="entry name" value="PSI_RSU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="4">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO56453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="230" mass="26185" checksum="BB8C23007B499262" modified="2011-01-11" version="1">MRINKYISETGFCSRRETNRLIAAGRITINGSVCEAGAEVEPLDIVLIDGKPIPINHSEPVYLALNKPIGIVCTAAEQVEGNIIRYVNYPSRIFAIGRLDKASEGLILLTNDGSIVNQMMRSEHGHEKEYVVTVDKPVTDEFTQTMSRGVEILNVITKPCKVDRISEYEFRIILTQGLNLQIRRMCKALGYRVLKLERVRIMNITLDHLERGQWRHLEKEELELLLAKLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>E3EHY1</accession>
    <name>E3EHY1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_11755</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371078.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2502"/>
    <dbReference type="EnsemblBacteria" id="ADO56473">
        <property type="protein sequence ID" value="ADO56473"/>
        <property type="gene ID" value="PPSC2_11755"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11755"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2487"/>
    <dbReference type="HOGENOM" id="CLU_2684405_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO56473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="74" mass="8800" checksum="371AB7D5EF4D9C71" modified="2011-01-11" version="1">MSHAYTLSQQNHWNNRSEQWKLPLYFSKLVLHHIKHFVDGMLSTGFSGTLTDIYRESLQDRDRRTLSHFLTHGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3EIG7</accession>
    <name>E3EIG7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bacitracin ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bcrA5</name>
        <name evidence="5" type="ORF">PPSC2_06250</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO55280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013369911.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_19205"/>
    <dbReference type="EnsemblBacteria" id="ADO55280">
        <property type="protein sequence ID" value="ADO55280"/>
        <property type="gene ID" value="PPSC2_06250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_06250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1288"/>
    <dbReference type="eggNOG" id="COG1131">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_2_9"/>
    <dbReference type="OMA" id="MIEYPIF"/>
    <dbReference type="OrthoDB" id="1833499at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="5"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO55280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="307" mass="34816" checksum="7193FF62AE7E9580" modified="2011-01-11" version="1">MTYILRTHQLTKAMKGNEIVAGVSMNVRKGETYGFLGPNGAGKTTVMKMITNLLKPTLGEIELFGEKLTPQSYHLLGRMGSIIEYPIFYERLTAQQNLELHCEYMGYYNKQAVRDALELVNLRNADDKPVKDFSLGMKQRLGIARAIATKPELLILDEPINGLDPVGIKEIRQLFHMLCKEYGMTLLVSSHLLAEIEQIADTIGVINHGRLIEEVSMEQVRDTNTEYIEFTTNDCKKAAYILSHQLSLNNIRVLNEQSIRIYDLSVPQKQITKTLILNDVEVDSIHQKSSTLEDYFLRLLHGGDHHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJA7</accession>
    <name>E3EJA7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Fusaricidin synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">bacC</name>
        <name evidence="9" type="ORF">PPSC2_11395</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pantetheine 4'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:47942"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013370999.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2422"/>
    <dbReference type="EnsemblBacteria" id="ADO56394">
        <property type="protein sequence ID" value="ADO56394"/>
        <property type="gene ID" value="PPSC2_11395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2410"/>
    <dbReference type="eggNOG" id="COG1020">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000022_0_0_9"/>
    <dbReference type="OrthoDB" id="572620at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043604">
        <property type="term" value="P:amide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901566">
        <property type="term" value="P:organonitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044550">
        <property type="term" value="P:secondary metabolite biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010071">
        <property type="entry name" value="AA_adenyl_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001242">
        <property type="entry name" value="Condensatn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010060">
        <property type="entry name" value="NRPS_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020802">
        <property type="entry name" value="PKS_thioesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001031">
        <property type="entry name" value="Thioesterase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00668">
        <property type="entry name" value="Condensation"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00975">
        <property type="entry name" value="Thioesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00824">
        <property type="entry name" value="PKS_TE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01733">
        <property type="entry name" value="AA-adenyl-dom"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01720">
        <property type="entry name" value="NRPS-para261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0045">Antibiotic biosynthesis</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="8">
        <location>
            <begin position="827"/>
            <end position="902"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="8">
        <location>
            <begin position="1881"/>
            <end position="1955"/>
        </location>
    </feature>
    <feature type="domain" description="Carrier" evidence="8">
        <location>
            <begin position="3422"/>
            <end position="3497"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="862"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="1916"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="7">
        <location>
            <position position="3457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="3748" mass="421283" checksum="65550AC7E2BE9478" modified="2011-01-11" version="1">MKALFEKEKNYWSHKLESEDRIICLPYTNHVSRDTAATDSNCHTYTLTFPSEISQRISSITGGAPWAVFMVLLAGVESLLHKYTGEESVLLGIPVAKSGNGATKPINHLLLLKNTLDSSTTFKTLLSQIKTSVSEAIEHQNIPFWNYTEGLEILRNKDDKPLIHTTASLQNIHISDFLHHVQSELDFQFQWENAAVSLNVKYSSDRYDQVTIERFVEQLLRLYTVVLHQPELEICTAQVLSEQEVEQLVHTFNDTAVDYPRDASIHELFEIQAKQVPQQVAVVSGPNSLTYEKLNEKANRLAHFLRKQGIRTEQTVGIVAERSIEMIVGMLAILKAGGVYVPIDSDYPDERVRYLLEDSETKILLVQKMEHRPTDFKGIVLDLSDDAIYETDDADRCNSVLSYDNGMSTDTGNMGYVDCLNPLYSISASPELASTTTIPTEATQSEQAKPIQQVYAAEEQPKATAADRLAYIMYTSGTTGQPKGVMVEHRNVVRLVKHANYARLDADTRILQTGSVVFDASTFEIWGALLNGGQLVLVSQDVILDVLKLKEAVRSHGITTMFLTTPLFNQLSQQDLALFEGIRELLVGGDVMSVPHMTRVLKAHPSLRISNIYGPTENTTFSTVHAINGVQSESVPIGRPIHNSTAYVVDRSMQLQPVGVWGELLVGGDGVARGYRNRPDLTAEKFIDSPFRNGERCYRTGDLVRWNADGALEYKGRIDAQVKIRGYRIELGEVEAQLLKLEVVREAVVTAHEDEQGQKQLCAYVVTHANAQLSELRSALSRELPGYMVPSYFVQLEQLPLTPNGKVDRRALPQPQGSISSGAEYVAPQNQLQAQLVSIWKDVLELERIGIKDNFFEAGGHSLRATNVISLIHKELHKNVQLKDLFQHPTIEQLAQVIEALEQTTYESIPVSGNKPFYAVSSAQKRMYILNQLDGAGTSYNIPGALTLTGSLDYKALDNAFRQLIYRHETLRTSFESMNGEPVQRVHDEVPFRVELIHAHGADQKETDELVHGFVQPFDLAHAPLFRAGLIETGPEHHILLLDMHHIISDGTSINVLIQDFIHLYAGDTLPSLRIQYKDYAAWQQEQQQSERYQEQENYWLNTFAGELPVLDIPTDYPRPAVRSFEGDVLEFTLDQRQSEGLKGIAMQTESTLYMVLLAAYTTLLSQYSGQEDIIVGSPIAGRPHADLSSLIGMFVNTLAIRNYPEGGKTFRDYVLEVKDNALKAFEHQDYPFEELVEKLGVDRDLSRNPLFDTMFALQNLEQTEQQLAELQLAPYPSEQTTAKFDLSLFAQEDGEQIACGFQYGTRLYKRETIERLAVHLQQLINVVIEQPEIALAAIEMVSAQEKEQLVEQFSTTAADSPYPRDQLLHVLFEEQVAQSPDRLAITFADTQLTYRELNERSDRLACVLTSHGIRRGSGAQIQRVGIVAERSIEMVVGMLAIMKAGGAYVPIDPEYPEERIRYLLEDSGAELLLSQRREQISFEPGIPVIDLSDAQLWSSEFEGYTHTHESASITNGGSALDLSHVIYTSGTTGKPKGVMVNHRNVARLVKGNSYATLDENTRMLQMGAVVFDASTFEIWGTLLNGGQLYVVNHDTILDAAKFKQVMNKYRINTMFMTTALFNQHSQQDIEVFASLKELLVGGDVMSVPHVNRVLKEYPQLRLSNVYGPTENTTFSTTYEITEPQTQGVPIGRPIDHSTIYVVNRSLKLQPVGAWGELLLGGDGVALGYLNRPELTAEKFIESPFRPEEYCYRTGDLVRWRADGVLEYKGRMDEQVKIRGYRIELGEVETRLSTIAGVKESVVTVRQDDSGQKQLCAYFVTDSELSASDLRSVLSQDLPSYMVPSYFVQLSKLPLTLNGKVDRRALSAPEPNVDTGMDYVAPETDVQLALAAAWGAILGIQKVGTQDNFFHLGGDSIKAIQVSSRLFQAGYKLEMKDLFKYPTIAGLSTYIQPVKRVAEQGEVTGHVVLTPIQRWFFEQSTDEPHYFNQSVMLYRQEGYNERALRLALHQITAHHDALRMTFRSSENGYTAWNRGVGEGEPYHLECFDYRDSEVIEENLEKMIEAKCNEIQSSISLSEGPLMRLGLFRCPDGDHLLVVIHHLTVDGVSWRILFEDLATAYEQAAKGEQVIQLPHKTDSFQTWAEKLHAYANSPAMERERAYWEGIAQAKPAPLPQDYGHNEHDKPLIGDSESVTALWTHEETEQLLKQANRAYRTEINDLLLTAVGMALQAWSGHDRFLINLEGHGREAILPEVDITRTIGWFTSQYPVLLDMPKETALSQRIKHAKEGLRSIPQKGIGYGILKYLAEVSPALCEVDPEISFNYLGQFDQDMKGNDLQSSPYSGGMPLSPTMARTYTLDFGGIISGGQLGLTISYSRTSYRPETIERLASLLESSLREILKHCIHKEHPELTPSDISYKGMRVEELDSLLSEMGATGEIDNVYTLTPMQKGMLFHSQLDSQAAANDAYFEQVSYDMQGQLDIHAFAESLNTLVRRHEALRTHFYFGRDTEPLQVVYRNQDCGFYYEDLRELDSDTRDTQLTNFKLQDKARGFDLRRDVLLRVAILRTGEDRYHFVWSFHHIVMDGWCLSLVNKEVFESYAALRERRVPELAPAVPYSRFIEWLEAQDRTAATDYWRSYLSGYEQQTELPAVKSGRKGEGYMASDWMTDWEHELALRVEETAKRYQVTMNTLLQTTWGILLQKYNNHSDVVFGSVVSGRPSDIIGVEDIIGLFINTIPVRIRSEAGETFAEVMKKMQEQAVASHAYDTYPLFEIQALTDQKQNLINHIMVFENYPVDEQIEEMGSDGQELLSVSNVTATEQTNYDLSIVVMPGEGIKIRFMYNELCFDQADIERLHGHFVHLLEQILLNPNVCVEELELVTASEKQQIIGEFNDTALAYSYNQTIQKRFEEQVERTPDHIAVVWGQQSLTYRELNERANRLARTLRAKGVKPDQSVGIMVYRSLEMIVGIYAILKAGGAYVPIDPEFPADRICFMLEDSGAKLVLTQSHLAEQASLSFDGQVLVLDHEDIYHEDGSNLEPLAGPHHVAYVIYTSGSTGKPKGVMVEHHSVLNRILWMHDRYGLSAEDTILQKTAFTFDVSVWELFWWSMVGSKVSLLSVGGEKNPEEIVDTIARDGVSTMHFVPAMLHAFLEYVEQQPREAMQAKLGTLRHVFASGEALPPQHVARFQRLVSSFAGAKLINLYGPTEATVDVSYFDCEPDEEYAVIPIGKPIQNIRLYIVKEGTGQLQPIGVAGELCIGGVGVARGYLNRPELTAEKFVKDPFAGGKAGYERMYRTGDLARWMPDGNIEYLGRIDHQVKIRGYRIELGEVEARLASVPLVRDSVVIALQDGIGQQQLCAYFTADEQLTVREIRAVLLGSLPSYMIPSVFVQMERIPLTANGKIDRKALPTPDTALRTGIEYVAPRTDVEQLLAAIWQEILDIPQVGIHDDFFTLGGHSLKVLELIRKVHLATNIELPIRSVLEFPTIEEQALTLLKADLEYKADSPIIRLNEHGPVSIFCFPPMLGYGLSFAELAKQLDQDAVVYGLEFVDDAADEQAMLARYVDLIVSTQAQGPYVLLGYSIGGNLAHKVASTLERQGHAVSDIFMLDSVKRTEALPFTDEETEQEIHAMLEQVPESYRELLNETYQRKMIAYAVYGNQLVNTEKVQANIHGFDAVGSETVKGTGDNRLLWKDATQGSYEEHSLIGNHYELLEPGFIEENVKGIRAAIQKITRNMDKGMAQGLAHHNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="66" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJB9</accession>
    <name>E3EJB9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Membrane protein insertase YidC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Foldase YidC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Membrane integrase YidC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Membrane protein YidC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yidC</name>
        <name evidence="11" type="synonym">yqjG</name>
        <name evidence="11" type="ORF">PPSC2_11445</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371011.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_23810"/>
    <dbReference type="EnsemblBacteria" id="ADO56406">
        <property type="protein sequence ID" value="ADO56406"/>
        <property type="gene ID" value="PPSC2_11445"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11445"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2420"/>
    <dbReference type="eggNOG" id="COG0706">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_036138_5_1_9"/>
    <dbReference type="OMA" id="NIGCLPI"/>
    <dbReference type="OrthoDB" id="524437at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032977">
        <property type="term" value="F:membrane insertase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01811">
        <property type="entry name" value="YidC_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028055">
        <property type="entry name" value="Membr_insert_YidC/Oxa1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001708">
        <property type="entry name" value="YidC/ALB3/OXA1/COX18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023060">
        <property type="entry name" value="YidC/YidC1/YidC2_Firmicutes"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12428">
        <property type="entry name" value="PTHR12428"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02096">
        <property type="entry name" value="60KD_IMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00701">
        <property type="entry name" value="60KDINNERMP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03592">
        <property type="entry name" value="yidC_oxa1_cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0143">Chaperone</keyword>
    <keyword evidence="8" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0564">Palmitate</keyword>
    <keyword evidence="4 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9 10" id="KW-0732">Signal</keyword>
    <keyword evidence="2 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008953358" description="Membrane protein insertase YidC" evidence="10">
        <location>
            <begin position="37"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="65"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="145"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="186"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="216"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADO56406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="277" mass="31544" checksum="611B307872BC8805" modified="2011-01-11" version="1">MKQFKGFTFWGKQERILGLIVALAVVMLLSGCGANAAEINAQTPGFFNHYVVFPLSWLIQHLAQWFGGSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMSAMQPDLDRIKKKYENKKDANSQQSMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYTAIRLTPELASHSFLWFRLGQPDWILAIVVAVVYLAQAKLSQLQMTADQHKQFAIMGYLSPIMMAVFSFNAPAAMPLYWTVSGTFLLLQSLWFRKRYPIEEAENKIKLGEVTPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJG4</accession>
    <name>E3EJG4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YrkF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yrkF</name>
        <name evidence="3" type="ORF">PPSC2_11940</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sulfur carrier protein TusA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371119.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2544"/>
    <dbReference type="EnsemblBacteria" id="ADO56514">
        <property type="protein sequence ID" value="ADO56514"/>
        <property type="gene ID" value="PPSC2_11940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_11940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2529"/>
    <dbReference type="eggNOG" id="COG0425">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG0607">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1414564_0_0_9"/>
    <dbReference type="OMA" id="ICHSGRR"/>
    <dbReference type="OrthoDB" id="1385159at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001455">
        <property type="entry name" value="TusA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036868">
        <property type="entry name" value="TusA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01206">
        <property type="entry name" value="TusA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64307">
        <property type="entry name" value="SSF64307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01148">
        <property type="entry name" value="UPF0033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="107"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="196" mass="21693" checksum="A903B07DA958EAC3" modified="2011-01-11" version="1">MSLTSHIEADQILDCKGLACPMPIVKTKKAMDELLAGQIMEVQVTDKGSLADFQSWAQGTGHQYLGTFQEGVVMRHYLRKANPTDVKEEQAFPSTISHKELQAKWFAKENFILLDVREPAEFALQHIPESKHIPLGELENRLAELNLEDEIAVICQAGARSERACRLLADKGAKNVKSVLSGMSGWAGEIIGYDSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="52" xmlns="http://uniprot.org/uniprot">
    <accession>E3EJJ5</accession>
    <name>E3EJJ5_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cellulase</fullName>
            <ecNumber evidence="2">3.2.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">celA1</name>
        <name evidence="10" type="ORF">PPSC2_12105</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371149.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_24440"/>
    <dbReference type="CAZy" id="CBM59">
        <property type="family name" value="Carbohydrate-Binding Module Family 59"/>
    </dbReference>
    <dbReference type="CAZy" id="GH5">
        <property type="family name" value="Glycoside Hydrolase Family 5"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56545">
        <property type="protein sequence ID" value="ADO56545"/>
        <property type="gene ID" value="PPSC2_12105"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12105"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2560"/>
    <dbReference type="eggNOG" id="COG2730">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG4124">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_012932_1_0_9"/>
    <dbReference type="OMA" id="FANFENG"/>
    <dbReference type="OrthoDB" id="1395441at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018087">
        <property type="entry name" value="Glyco_hydro_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00659">
        <property type="entry name" value="GLYCOSYL_HYDROL_F5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="5 7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 7 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003169010" description="Cellulase" evidence="8">
        <location>
            <begin position="37"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="domain" description="Cellulase" evidence="9">
        <location>
            <begin position="61"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO56545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="493" mass="53519" checksum="0D257FC41CD1B686" modified="2011-01-11" version="1">MKMSFNSFTKPLIMILLFSLLTLLFQAALPATPASAAACANPVSYFGEMKASGNKINGSKTNRPMMVKGSSFFWSNWSGPFWNTATVNRMVDEFQVEIVRAAYGVDPSGNPYNTADESKVRDVVNAAIAKGIYVIIDWHSHDAHNNVNAAKSFFSRMAQEYGSYDNVIFEIYNEPTQVSWGTIKSYAEQVIPAIRQHSDNLIVVGTPFWSQNVDQAANDPITSSSNIAYTLHFYAGTHFQSLRDKANYAMSKGIPLFVTEMGFVNADGDGGINYDSTNQWLDWMNQNNLSWANWAINDKTEGASIFNTNGSLTAGGNYLKSILAGHAPYAEWRQNAACGGSSANTLYDFEGSTQGWTGSNISDGPWSVNEWSSKGSNSLKADIIMSANSQHYLLLSQSRNLSGKATLSATVKHASWDSAGDGLNAKIYAKTGSGWAWYAGKAVKINSSGGTTLSFNLASVPNLDDVREIGIQFLASANSSGKSAVYVDNVTLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EK26</accession>
    <name>E3EK26_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386149.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0344"/>
    <dbReference type="EnsemblBacteria" id="ADO59735">
        <property type="protein sequence ID" value="ADO59735"/>
        <property type="gene ID" value="PPSC2_26495"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26495"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5587"/>
    <dbReference type="HOGENOM" id="CLU_1260422_0_0_9"/>
    <dbReference type="OrthoDB" id="2093490at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="203" mass="23006" checksum="5514F233B0808C0B" modified="2011-01-11" version="1">MNLYQVIESGQKIVPAEPNLFSEPLFYVSFCICCSILIALLINGEVELFVAAAFSMLFIGSCVLLLTYTNDGHKNLKQYDSDIEHWKKEIAMPYIHSLPVKKSEVIYIKIDPELGTDVKNSDPFYNLTYSKEVRRTPVVVSFKEGGEVTTTTDWVTTSMELSDGEKPFIEYQRLDSDLGHDVNAGIYNAKIHLPKSYTFTDIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKI1</accession>
    <name>E3EKI1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transition state regulator Abh</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26100</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386227.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0423"/>
    <dbReference type="EnsemblBacteria" id="ADO59813">
        <property type="protein sequence ID" value="ADO59813"/>
        <property type="gene ID" value="PPSC2_26100"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26100"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5494"/>
    <dbReference type="eggNOG" id="COG2002">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_117609_0_0_9"/>
    <dbReference type="OrthoDB" id="1942483at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="150" mass="17245" checksum="DE9F4A9C1F5DF96C" modified="2011-01-11" version="1">MKSVGIIRELDHLGRIVIPKETRVLLGIHMGDPLEIFINEEEKMLALRKHVGVACKMCGAVDQLTYFRNSFLCSSCVHDLKEGKNCLQYAEEESAQTEPKERRTTRNSDELLGELKVLMAKHPTYTQKDYARLLNTSQPRISQLKRLMQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKK5</accession>
    <name>E3EKK5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386251.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0448"/>
    <dbReference type="EnsemblBacteria" id="ADO59837">
        <property type="protein sequence ID" value="ADO59837"/>
        <property type="gene ID" value="PPSC2_25985"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25985"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5465"/>
    <dbReference type="eggNOG" id="ENOG502ZNQ6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1794608_0_0_9"/>
    <dbReference type="OMA" id="GARENSF"/>
    <dbReference type="OrthoDB" id="2044409at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="144" mass="17210" checksum="F693FBC389E77AD3" modified="2011-01-11" version="1">MRLVPLKQWYCDHCGKVIERPEDGYLEWKKKGNDTSYGFRIVHFKTCQYNENALNPNEILQDLQLDEFVGSDGLVRLLWLLRELKFRNVDEMYEIFQRIQLPNYEEARTHFNEAVDDGYIEMIGARENSFSHNLLTIIEKYAQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKM0</accession>
    <name>E3EKM0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386266.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0463"/>
    <dbReference type="EnsemblBacteria" id="ADO59852">
        <property type="protein sequence ID" value="ADO59852"/>
        <property type="gene ID" value="PPSC2_25930"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25930"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5449"/>
    <dbReference type="HOGENOM" id="CLU_2845730_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="65" mass="7381" checksum="6EB1E3B79D1C9FBA" modified="2011-01-11" version="1">MLKGCIIANIEEKELLESLGVIVGAYNDSTKEFQNCLVSDEAMGKLDDHWGTFWWSLEEIDDVQC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>E3EKR5</accession>
    <name>E3EKR5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_27515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013385930.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0122"/>
    <dbReference type="EnsemblBacteria" id="ADO59516">
        <property type="protein sequence ID" value="ADO59516"/>
        <property type="gene ID" value="PPSC2_27515"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_27515"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5824"/>
    <dbReference type="HOGENOM" id="CLU_2396879_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="93" mass="10563" checksum="2471D01C1D5E27A5" modified="2011-01-11" version="1">MLKKVLISLHALLAWFLGDGLAHTGVLFHALILTYILKHSIIDEFMVGSLTFQEALSRGGSILGTWFVLFLVIVCLYYLFEYLLSTLEKVEEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3EL96</accession>
    <name>E3EL96_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_28530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="ADO59928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013386342.1">
        <property type="nucleotide sequence ID" value="NC_014628.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_p0539"/>
    <dbReference type="EnsemblBacteria" id="ADO59928">
        <property type="protein sequence ID" value="ADO59928"/>
        <property type="gene ID" value="PPSC2_28530"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_28530"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.6054"/>
    <dbReference type="HOGENOM" id="CLU_1935979_0_0_9"/>
    <dbReference type="OrthoDB" id="2040177at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="130" mass="14796" checksum="5E24AF38F5C7D9C3" modified="2011-01-11" version="1">MVEFLMPIGDWSGDGHGMCKYYLICSNKPFEEVERAHHKIKDNTGIDLESICADYQENEISCEMKDMLDETGFNTANLKVNPFDEEAYVMTADDLCQLWIFLLMKADSELQLTVKSLETLSGNVGYGVFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZBV5</accession>
    <name>A0A0D5ZBV5_PAEPS</name>
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        <submittedName>
            <fullName evidence="2">Transposase</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="primary">iS1353B</name>
        <name evidence="2" type="ORF">PPSC2_13805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44260">
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        <property type="gene ID" value="PPSC2_13805"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13805"/>
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    <dbReference type="HOGENOM" id="CLU_138501_1_0_9"/>
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    </dbReference>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="93"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="100"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="114" mass="12988" checksum="9ADD770EC5C45496" modified="2015-05-27" version="1">MSNKRGAFKIFSKQEIKQLEDNPNVQKVTDKTITYTPEFKVEAVKAYEAGQTPMDIFLRAGFDIDIIGHEKPKKSLYRWRNIYAAHGEASLLEEQRGKGSVGRPQTNNLSTEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCB7</accession>
    <name>A0A0D5ZCB7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_08770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Bacilli</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
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    </dbReference>
    <dbReference type="RefSeq" id="WP_025677012.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44219">
        <property type="protein sequence ID" value="AKA44219"/>
        <property type="gene ID" value="PPSC2_08770"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_08770"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1848"/>
    <dbReference type="HOGENOM" id="CLU_2260990_0_0_9"/>
    <dbReference type="OrthoDB" id="1732407at2"/>
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        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="103" mass="11896" checksum="6A260E567CE7E903" modified="2015-05-27" version="1">MGWKHIVLEASCFYEDNEENHGSKCCKGNIGVHCLTYNQDGHQICPNLVFGKSRTSVIATDKDGNAVDSSTFWTDEKLSPEEWVRREEEWLDEKRRLMNMDGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCD1</accession>
    <name>A0A0D5ZCD1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_05080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
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        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="AKA44192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885885.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44192">
        <property type="protein sequence ID" value="AKA44192"/>
        <property type="gene ID" value="PPSC2_05080"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_05080"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.1028"/>
    <dbReference type="HOGENOM" id="CLU_1904687_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="133" mass="15994" checksum="715934317E6D20E8" modified="2015-05-27" version="1">MSEEELKRYWISSLWYLNFRQNGSISKQEDIQWFFYTVGERIESRFQMNLPSFMFLAKSMRYSMQMPISIEAYDINVLRCSDHFQGRQDRKLWNEQGIRHIHPSAICTRWERQEIGGVSPDFRDGDIPFLIDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCL1</accession>
    <name>A0A0D5ZCL1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_26310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="2 3">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
            <plasmid evidence="2 3">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44348">
        <property type="protein sequence ID" value="AKA44348"/>
        <property type="gene ID" value="PPSC2_26310"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26310"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5542"/>
    <dbReference type="HOGENOM" id="CLU_1309136_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="2" id="KW-0614">Plasmid</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AKA44348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="210" mass="24064" checksum="DD8F36653B3D8DB5" modified="2015-05-27" version="1">MWFWFFIFVSVFLLLSPSIWCVTKENKSVITFWQLGKIAYFFVLALLFGYFVLKDHTYSALFSTILIPYGIWLCVETSYLFSSSKWGLFIPIALVWIYMTMIFPLIIRQDLYSLVQAVATGESKQVVNPTNVSQLKKITGKVLRVGTVQMGDAPIVQVILENSNKVFNLNPKKAIFASFIKEGDMLNLSFVDTKEANVTVEKMTNQTIHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCU4</accession>
    <name>A0A0D5ZCU4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
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            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44347">
        <property type="protein sequence ID" value="AKA44347"/>
        <property type="gene ID" value="PPSC2_26270"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26270"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5532"/>
    <dbReference type="eggNOG" id="ENOG50307BJ">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_1902501_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="125" mass="14522" checksum="F135C837A0134408" modified="2015-05-27" version="1">MDVINQLIREIGNRGHRFLYSEQHDRYASFHWASGWLWLTDDCTGAPLLMDESKTDEHYHFSQGGTLWGLMCDFRDYINGDDDANHNNGYGGLYCPHWGYSKEDMQAIREKALELGYLKPRVKGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-05-27" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0D5ZCV4</accession>
    <name>A0A0D5ZCV4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_26640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <geneLocation type="plasmid" evidence="1 2">
        <name>pSC2</name>
    </geneLocation>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
            <plasmid evidence="1 2">pSC2</plasmid>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002214">
        <property type="protein sequence ID" value="AKA44357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="AKA44357">
        <property type="protein sequence ID" value="AKA44357"/>
        <property type="gene ID" value="PPSC2_26640"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_26640"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5626"/>
    <dbReference type="HOGENOM" id="CLU_2863644_0_0_9"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Plasmid pSC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0614">Plasmid</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="AKA44357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="64" mass="7590" checksum="0FA1B45339C088FE" modified="2015-05-27" version="1">MSAAYVTISSIRGVIRKYGGNRNDVRALRDTYQMMKEDEFLVRHPYLTIEDFRSLKVKFTRKNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4A8</accession>
    <name>E3E4A8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore gernimation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gerKA3</name>
        <name evidence="3" type="ORF">PPSC2_12590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GerABKA family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371252.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2680"/>
    <dbReference type="EnsemblBacteria" id="ADO56648">
        <property type="protein sequence ID" value="ADO56648"/>
        <property type="gene ID" value="PPSC2_12590"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_12590"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2672"/>
    <dbReference type="eggNOG" id="COG0619">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021639_4_1_9"/>
    <dbReference type="OMA" id="TMPYWIS"/>
    <dbReference type="OrthoDB" id="576172at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009847">
        <property type="term" value="P:spore germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004995">
        <property type="entry name" value="Spore_Ger"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03323">
        <property type="entry name" value="GerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005690">
        <property type="entry name" value="GerBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="278"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="320"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="370"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="400"/>
            <end position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO56648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="482" mass="54532" checksum="02458F0F70370968" modified="2011-01-11" version="1">MWKSSEINTYRLTLDVLKTMLAGISEASIIERCPPSGNPIWIIYLDTLVDEARINESILKPLLTINDRPVPERILNCKFTEIHTLKDAEQQLMRAAVIVHEPALNQWWTTLLPITLGRPVGKSETETIIYGPQDSFTEQIDQNITLIRRRLPLSTLKSEQFTAGSLSSTSVSLLYIEGLTNTNLISNTKEKLVALNYDIFLDSGQIGVFIEDHSNSLFPQLQQTDRPDQCAYSLAMGKVVILVDNSPFALIGPITFFHLFQSPEDYIHRWIVASFLRLLRFFSFFLSLILIPVYVALTAHHYQMIPLPLLFVLIESRSKLPFTPFWEGLIMLVILEIIKEASLRMPNKTSQTLGVVGGIVIGQAAVEAGFASKVLIVLLGVSGIASFLSPNYQISKANTVIQLTLLCLAAYFGIFGIILGLIALLAHLNGLTSLREPYLAPLTPLYFKDWKDFIIRVSLHWMETRPSYLKPLKKWRYSRRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4L0</accession>
    <name>E3E4L0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_13800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371511.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO56909">
        <property type="protein sequence ID" value="ADO56909"/>
        <property type="gene ID" value="PPSC2_13800"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13800"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2941"/>
    <dbReference type="eggNOG" id="ENOG50307I5">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137930_0_0_9"/>
    <dbReference type="OrthoDB" id="2052773at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168542" evidence="1">
        <location>
            <begin position="24"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO56909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="152" mass="16593" checksum="16AC6D064320B667" modified="2011-01-11" version="1">MKRLMSFGIAASLLLSLSPAAFAQDSISANQTDNSFIKVVENTENQDGHVITPFDVQLINPIHHTGKGAFEKTFTMIPENGEDANVFVKNNGSSTVYVEIKKLGSSTSIDTSVSPGSQKTLQIYSQSKNSYSVYIYTQDGSQMDLNISARQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="67" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4U1</accession>
    <name>E3E4U1_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">N-(5'-phosphoribosyl)anthranilate isomerase</fullName>
            <shortName evidence="4">PRAI</shortName>
            <ecNumber evidence="2 4">5.3.1.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">trpF</name>
        <name evidence="6" type="ORF">PPSC2_14560</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:21540"/>
            <dbReference type="ChEBI" id="CHEBI:18277"/>
            <dbReference type="ChEBI" id="CHEBI:58613"/>
            <dbReference type="EC" id="5.3.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 4">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 3/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the TrpF family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.24" evidence="2 4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371666.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02210"/>
    <dbReference type="EnsemblBacteria" id="ADO57069">
        <property type="protein sequence ID" value="ADO57069"/>
        <property type="gene ID" value="PPSC2_14560"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14560"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3107"/>
    <dbReference type="eggNOG" id="COG0135">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_076364_2_0_9"/>
    <dbReference type="OMA" id="FYAKSPR"/>
    <dbReference type="OrthoDB" id="1854712at2"/>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00042"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004640">
        <property type="term" value="F:phosphoribosylanthranilate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00405">
        <property type="entry name" value="PRAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00135">
        <property type="entry name" value="PRAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001240">
        <property type="entry name" value="PRAI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044643">
        <property type="entry name" value="TrpF_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42894">
        <property type="entry name" value="PTHR42894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00697">
        <property type="entry name" value="PRAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="PRAI" evidence="5">
        <location>
            <begin position="6"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO57069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="228" mass="25076" checksum="D671B06DC220F71F" modified="2011-01-11" version="1">MNKTGVKICGLQSVEVLKSMVNLPVDYIGFVFADSKRRIDGAHAGELLRVLDEWTPGSRPRSVGVFVNPSDALLNDVMEKAPLDVIQLHGQESPQRCRELKERFGIQVFKAWSVDSQGQTVKGKIEHRADELEAYVGTIDALLLDTYDPLYGGGSGKTFAWDRIPAYQAWTHQHGIPLFVAGGLTADNAEKLINEYHPEGLDVSSGVETNGVKDIAKITAFVERVKQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="46" xmlns="http://uniprot.org/uniprot">
    <accession>E3E4Y4</accession>
    <name>E3E4Y4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stage III sporulation protein AE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spoIIIAE</name>
        <name evidence="3" type="ORF">PPSC2_15130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371784.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02750"/>
    <dbReference type="EnsemblBacteria" id="ADO57192">
        <property type="protein sequence ID" value="ADO57192"/>
        <property type="gene ID" value="PPSC2_15130"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15130"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3229"/>
    <dbReference type="eggNOG" id="ENOG502Z7PW">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_046838_1_1_9"/>
    <dbReference type="OMA" id="EYGGFLP"/>
    <dbReference type="OrthoDB" id="805701at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014194">
        <property type="entry name" value="Spore_III_AE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09546">
        <property type="entry name" value="Spore_III_AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02829">
        <property type="entry name" value="spore_III_AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5003168002" evidence="2">
        <location>
            <begin position="26"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="197"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="311"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="365"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO57192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="396" mass="42799" checksum="804F3A2984C5B226" modified="2011-01-11" version="1">MKRLGGMPNLKVIVILLLCLWCASAAVLFADTPTNEWIRQQAEQMPKDDVEHYWDGLMKQYGGFFPDQKTPSFMDMLLPGGEGFTIKGVLMAIADFFIHEIRVNAKLLVTIVMLSIMSMVLETLQSAFESKQVSKVAYAIVYMVIIILAINSFSVAIGYAKEAIDSMIHFMMAMLPLLFTMLASMGNVVTVSVTHPLIVFMINTVGTVIHTLVFPLLFFSAVLYLVNSLTGKYKLTQLADLLRNAGVAVLGVLLTIFLGVISVQGLTSSVTDGLTIRTAKYITGSFVPVVGKALADATDTVISASLLVKNAIGLVGVIIILFLCAFPALKILTLALIYKVTAAIMQPLGDTPIVECLDAIGKSMIYVFAALAAVGLMSFLAITVMLAAGNMTVMMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3E5B2</accession>
    <name>E3E5B2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HphI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hphI</name>
        <name evidence="1" type="ORF">PPSC2_16455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372058.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3516"/>
    <dbReference type="REBASE" id="28406">
        <property type="entry name" value="PpoSC2ORF3516P"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57472">
        <property type="protein sequence ID" value="ADO57472"/>
        <property type="gene ID" value="PPSC2_16455"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16455"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3513"/>
    <dbReference type="eggNOG" id="COG3440">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054701_0_0_9"/>
    <dbReference type="OMA" id="ASHCKPW"/>
    <dbReference type="OrthoDB" id="1629654at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="302" mass="35321" checksum="D6E192923950A897" modified="2011-01-11" version="1">MRYFFVFQNKTYREEHDGGFLWAPKKNKDGKTFHHWTSMTSVKKGDIIFSSYKGRMHSVIIAKKNYRESKKPDSLVSVDNWEQDGWIVDAEYRDISTPIKYKNYMNDILTLQGKKYAPYNLTGRGNTGYLFQITEELANFLFTKVGITVADLELVAKSEDEIIGDVENDVSQIPEETIREQLVQTRVGQDKFKQELIKLDKKCKLCGLDNINFLRASHSKPWRDSNNKERLDKYNGFLFCPAHDTLYDRGYISFDNDGSLLISPYLDDLSKLLMNVEAQMKITLLEGHKHYVKYHREHIFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E692</accession>
    <name>E3E692_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">corC3</name>
        <name evidence="13" type="ORF">PPSC2_13180</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0053 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56777.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_043885977.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_00855"/>
    <dbReference type="EnsemblBacteria" id="ADO56777">
        <property type="protein sequence ID" value="ADO56777"/>
        <property type="gene ID" value="PPSC2_13180"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13180"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2805"/>
    <dbReference type="eggNOG" id="COG1253">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015237_4_0_9"/>
    <dbReference type="OrthoDB" id="1155802at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04590">
        <property type="entry name" value="CBS_pair_CorC_HlyC_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002550">
        <property type="entry name" value="CNNM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044751">
        <property type="entry name" value="Ion_transp-like_CBS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005170">
        <property type="entry name" value="Transptr-assoc_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03471">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01595">
        <property type="entry name" value="DUF21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01091">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51846">
        <property type="entry name" value="CNNM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0129">CBS domain</keyword>
    <keyword evidence="7 9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="106"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="143"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="domain" description="CNNM transmembrane" evidence="12">
        <location>
            <begin position="7"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="11">
        <location>
            <begin position="230"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="11">
        <location>
            <begin position="290"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADO56777.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="444" mass="49625" checksum="536BAB0719F4CFF1" modified="2015-05-27" version="2">MGSILSDPLPSMFNLFIVFALVLLNGFFVSAEFAMVKVRGSRIETLVEAGNKKAVYAANMIHNLDAYLSACQLGITLASLGLGWIGEPAIAHLIEPIFTAAGLGAVYVHGTAVVIAFIVITILHIVLGELAPKTIAIRKSETITLYSAMLMTWFYKLMYPFIWALNGMANSLLRLFRLEPVSEYDDSAHTGDEIRILMKESNKSGLIDNTELALVDNIFDFADTTAREIMIPRTEMICLYSNESTEENLAIATESMRTRYPICAEDKDHIIGFIHIKDLLRANTLDTRTMIRPILAVPESTQISDLLKRMQRSKTQIAILIDEYGGTSGMVTLEDIMEEIVGEIQDEFDQERPSCEQINDEEFSIDGMLLIDEVNDRFGLDLDHEDYDTVGGWLYSHVEVIPPQPGQSVVFEGCMFIVEEVENKRISRIRLIKQPIVVEEAGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6D5</accession>
    <name>E3E6D5_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PtsGHI operon antiterminator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glcT</name>
        <name evidence="2" type="ORF">PPSC2_18885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372581.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_06095"/>
    <dbReference type="EnsemblBacteria" id="ADO58004">
        <property type="protein sequence ID" value="ADO58004"/>
        <property type="gene ID" value="PPSC2_18885"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18885"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4048"/>
    <dbReference type="eggNOG" id="COG3711">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_078802_0_0_9"/>
    <dbReference type="OMA" id="VMQEILN"/>
    <dbReference type="OrthoDB" id="1193348at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.24.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004341">
        <property type="entry name" value="CAT_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036650">
        <property type="entry name" value="CAT_RNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011608">
        <property type="entry name" value="PRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036634">
        <property type="entry name" value="PRD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03123">
        <property type="entry name" value="CAT_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00874">
        <property type="entry name" value="PRD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01061">
        <property type="entry name" value="CAT_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50151">
        <property type="entry name" value="SSF50151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63520">
        <property type="entry name" value="SSF63520"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51372">
        <property type="entry name" value="PRD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="68"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="domain" description="PRD" evidence="1">
        <location>
            <begin position="174"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="290" mass="33870" checksum="E35BBDF6AF45BC4A" modified="2011-01-11" version="1">MSSLKVAKALNNNVIIGMHPEHDEVVVIGKGIGFNRKPGDLMPLDSVEKLFILKSHEEQEQYKRLLPELDEKLIEVIGEVLHLVQLQAKKPLNEHILIALTDHIAFSINRHKQGITIHNPFLYETREIYPQEYKMAEQAVALIKDKMDVDLGEDEIGFVALHIYSAMTNQHISEVRKDSRLIADMVQVVETTLDYRIPLQSLDYSRLLTHLRFAIERVRRGEIVQEIYRLDKLLNEEYPEMYMLAWKLTKIMEKRLRKPVYPAEVSYLTMHLQRLSQRKQGEQQTVIKPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-05-25" version="53" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6E4</accession>
    <name>E3E6E4_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">L-glyceraldehyde 3-phosphate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tas3</name>
        <name evidence="3" type="ORF">PPSC2_18925</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the shaker potassium channel beta subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372590.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c4063"/>
    <dbReference type="EnsemblBacteria" id="ADO58013">
        <property type="protein sequence ID" value="ADO58013"/>
        <property type="gene ID" value="PPSC2_18925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4056"/>
    <dbReference type="eggNOG" id="COG0667">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_023205_2_0_9"/>
    <dbReference type="OMA" id="YSMINRW"/>
    <dbReference type="OrthoDB" id="1351747at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005399">
        <property type="entry name" value="K_chnl_volt-dep_bsu_KCNAB-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43150">
        <property type="entry name" value="PTHR43150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="2">
        <location>
            <begin position="28"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="339" mass="37439" checksum="DC9B8211D8113827" modified="2011-01-11" version="1">MVYLAGEDRYESMKYNRTGRSGLKLPAISLGLWHNFGGINNAENGRSMITRSFDLGITHFDLANNYGPPAGSAEEFFGQVLASDMKPYRDELVISTKAGYHMWAGPYGDWGSRKYMISSLDQSLKRMGLDYVDIFYSHRFDPNTPLEETMGALDHIVRSGKALYVGVSNYSAEQTAEAARILKELGTPMLIHQPRYSLLDRWIENGLQDVLDENGIGSIAFCPLAQGLLTNKYLNGIPEDSRAASTSVFLNENHVTPETLRKVRALNQMAAARGQSLAQFSLAWALRGERLTSVLIGASRVSQIEENVEALSNLEFSQEELDRIDSILNAGNGQDGGTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="58" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6U7</accession>
    <name>E3E6U7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fhuC3</name>
        <name evidence="5" type="ORF">PPSC2_21340</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373067.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08565"/>
    <dbReference type="EnsemblBacteria" id="ADO58499">
        <property type="protein sequence ID" value="ADO58499"/>
        <property type="gene ID" value="PPSC2_21340"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21340"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4536"/>
    <dbReference type="eggNOG" id="COG1120">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_11_9"/>
    <dbReference type="OMA" id="MVLHDLQ"/>
    <dbReference type="OrthoDB" id="1048863at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="263" mass="29355" checksum="FB0EE578280760D0" modified="2011-01-11" version="1">MTAIQGEHLSLQRGYFQLDDVNITLPAGQLTAIVGPNGSGKSTLLRILTRLLKQDQGKVSILGKPVEEYKRRDLAQTITMLPQMKDILPLLTVRELVAYGRSPHAKGLRTRPTRQDQQIIDHVMGITGIQPYADRMFHTLSGGEQQKARIAMALAQQTGILLLDEPTTFLDIAHQFEVMDMLRRINHESGLTIVMVLHDLQQAAAYCHHMIALKRGRIAVAGEPRQILTSAFLRDIYEMNATIKFEDGYPVIIPTIPHHSGGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6V0</accession>
    <name>E3E6V0_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome D ubiquinol oxidase subunit II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cbdB</name>
        <name evidence="8" type="ORF">PPSC2_21355</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373070.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08580"/>
    <dbReference type="EnsemblBacteria" id="ADO58502">
        <property type="protein sequence ID" value="ADO58502"/>
        <property type="gene ID" value="PPSC2_21355"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21355"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4539"/>
    <dbReference type="eggNOG" id="COG1294">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_823259_0_0_9"/>
    <dbReference type="OMA" id="LQFAFAW"/>
    <dbReference type="OrthoDB" id="761975at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003317">
        <property type="entry name" value="Cyt-d_oxidase_su2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02322">
        <property type="entry name" value="Cyt_bd_oxida_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="116"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="200"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="234"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="259"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="302"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ADO58502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="343" mass="38419" checksum="FC701C0B01A50EB1" modified="2011-01-11" version="1">MSYEIVGIAILWTFLFGYLLVASIDFGAGFFSFYSVLTGHQNKIHNIIQRYLSPVWEVTNVFLIFFVVGLNGFFPDAAYYYGTALLVPGSIAIVLLAIRGVYYAYNTYGHSGKNNIVYMALYGATGLLIPAALSTVLAISEGGIILENRTGVHLQWGQLLSNPYTWAVIILALVSVLYISAMFLCFYAKRAGDKVAFEIVRGYALLWSAPTILASLFAFFQINKQNPDHFANMLSMAWMFVASFICFVGAVYLVWQRRYLGLSFILVMLQFAFAWYGYGRSHLPYVLYPYINVYDSFTNSTMAYALITAFVAGLLVLIPSLILILRLFLFDAKYVRGQAGKKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="61" xmlns="http://uniprot.org/uniprot">
    <accession>E3E6V2</accession>
    <name>E3E6V2_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">prsX</name>
        <name evidence="3" type="ORF">PPSC2_21365</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373072.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08590"/>
    <dbReference type="EnsemblBacteria" id="ADO58504">
        <property type="protein sequence ID" value="ADO58504"/>
        <property type="gene ID" value="PPSC2_21365"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21365"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4542"/>
    <dbReference type="eggNOG" id="COG1846">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_083287_27_3_9"/>
    <dbReference type="OMA" id="EPYLELM"/>
    <dbReference type="OrthoDB" id="1744037at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="2">
        <location>
            <begin position="32"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADO58504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="184" mass="20984" checksum="E8BF340A44C8FE27" modified="2011-01-11" version="1">MPPKQSKRDTIQQPLPRMGPEPYLELMDQTALAETDRQLARIGLFLLWTSDNTLDAIDLDLAAYGLTESKLDLLLLLTLHQSQAQMSPSMIADRLGIRRASVTSLLDWTEQRGWIIREQSSIDRRKIHVRITEAGSHLVQQVLPVFWSSCASLASILEPEEQIIFLRIIEKIHHHMEDKLGVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>E3E706</accession>
    <name>E3E706_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">50S ribosomal protein L5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">rplE</name>
        <name evidence="10" type="ORF">PPSC2_22375</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the universal ribosomal protein uL5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007432571.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_09840"/>
    <dbReference type="EnsemblBacteria" id="ADO58708">
        <property type="protein sequence ID" value="ADO58708"/>
        <property type="gene ID" value="PPSC2_22375"/>
    </dbReference>
    <dbReference type="GeneID" id="66575592"/>
    <dbReference type="KEGG" id="ppm:PPSC2_22375"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4744"/>
    <dbReference type="eggNOG" id="COG0094">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_061015_2_1_9"/>
    <dbReference type="OMA" id="ERMYAFL"/>
    <dbReference type="OrthoDB" id="1456375at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01333_B">
        <property type="entry name" value="Ribosomal_L5_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002132">
        <property type="entry name" value="Ribosomal_L5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020930">
        <property type="entry name" value="Ribosomal_L5_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031309">
        <property type="entry name" value="Ribosomal_L5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020929">
        <property type="entry name" value="Ribosomal_L5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022803">
        <property type="entry name" value="Ribosomal_L5_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031310">
        <property type="entry name" value="Ribosomal_L5_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11994">
        <property type="entry name" value="PTHR11994"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00281">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00673">
        <property type="entry name" value="Ribosomal_L5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002161">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55282">
        <property type="entry name" value="SSF55282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00358">
        <property type="entry name" value="RIBOSOMAL_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L5" evidence="8">
        <location>
            <begin position="27"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L5_C" evidence="9">
        <location>
            <begin position="86"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="181" mass="20580" checksum="099B70BDDF1E58AE" modified="2011-01-11" version="1">MATTRMKERFLKEITPALMQKFNYTTVMQVPKIEKVVINMGVGDAVQNSKVLDSALNDMQLIAGQKPVITRAKKSIAGFKLRENMPIGVKVTLRGERMYYFLDKLFNITLPRVRDFHGVSTKAFDGRGNYTLGLKEQLIFPEIEYDQVDKVRGMDIVIVTTAKTDEESRELLTQLGMPFAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E744</accession>
    <name>E3E744_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">ATP synthase subunit b</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">ATP synthase F(0) sector subunit b</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">ATPase subunit I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">F-type ATPase subunit b</fullName>
            <shortName evidence="11">F-ATPase subunit b</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 14" type="primary">atpF</name>
        <name evidence="14" type="ORF">PPSC2_23265</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).</text>
    </comment>
    <comment type="function">
        <text evidence="10 11">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell membrane</location>
            <topology evidence="11">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11 12">Belongs to the ATPase B chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373436.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10755"/>
    <dbReference type="EnsemblBacteria" id="ADO58899">
        <property type="protein sequence ID" value="ADO58899"/>
        <property type="gene ID" value="PPSC2_23265"/>
    </dbReference>
    <dbReference type="GeneID" id="66575420"/>
    <dbReference type="KEGG" id="ppm:PPSC2_23265"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4926"/>
    <dbReference type="eggNOG" id="COG0711">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_079215_4_2_9"/>
    <dbReference type="OMA" id="FAWKPIL"/>
    <dbReference type="OrthoDB" id="1999641at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01398">
        <property type="entry name" value="ATP_synth_b_bprime"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028987">
        <property type="entry name" value="ATP_synth_B-like_membr_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002146">
        <property type="entry name" value="ATP_synth_b/b'su_bac/chlpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005864">
        <property type="entry name" value="ATP_synth_F0_bsu_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00430">
        <property type="entry name" value="ATP-synt_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81573">
        <property type="entry name" value="SSF81573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01144">
        <property type="entry name" value="ATP_synt_b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 11" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 11 12" id="KW-0138">CF(0)</keyword>
    <keyword evidence="13" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 11 12" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="7 11 12" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 11 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="13">
        <location>
            <begin position="52"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01398"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ADO58899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="162" mass="18545" checksum="E554ECFA28DD5DD7" modified="2011-01-11" version="1">MSLNWTSIVFTIIAFLILYWLLTRYAFGPLFSVMEKRRQLVLQQMNEAAQTREQAVAYVEEQKQALQQARKEAYDIIEQSKQTGNKQAEQIIIQAKDEAVRLKDEAVREITSERNKAVAELRSEVGKASVQIASKLIQKEIKEDQVQGELVDQYLKEVGGKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="54" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7G1</accession>
    <name>E3E7G1_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl hydrolase family 88</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yteR</name>
        <name evidence="1" type="ORF">PPSC2_24535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373705.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_12015"/>
    <dbReference type="CAZy" id="GH105">
        <property type="family name" value="Glycoside Hydrolase Family 105"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO59172">
        <property type="protein sequence ID" value="ADO59172"/>
        <property type="gene ID" value="PPSC2_24535"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_24535"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5197"/>
    <dbReference type="eggNOG" id="COG4225">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_038720_1_0_9"/>
    <dbReference type="OMA" id="PLVWNRA"/>
    <dbReference type="OrthoDB" id="982403at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010905">
        <property type="entry name" value="Glyco_hydro_88"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07470">
        <property type="entry name" value="Glyco_hydro_88"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="375" mass="43482" checksum="70471602BFFFA796" modified="2011-01-11" version="1">MANSTSQPTTNPTKTESWAVRMSESVLKRSPERYEKWEYDHGVIYRGLEWVGELTGDPKYMEYIKKHMDHFVDENGVIQRYKVDEYNIDHVNNGKLLFTLYRATGDERYKKAAFQLRSQLEKHPRTSEGAFWHKQIYPYQIWLDGLYMGAPFYAEFIREFGDPSEFDDVTLQFKLCYKHTRDPETGLLYHAWDEKLEQPWCNPETGCSKNFWGRSMGWFVMALVDVLDYIPEDHADRPVLIDMLNETLEALLKVRDKESGVFYQVLNLGHVKGNYLEASASCMILYAIAKGVRKGYLPEHYRQEAEIIRKGIIDEFITITEEGLVNLNKTVQVSGLGGKDRRDGTFAYYISEPIITNDPKGIGAFIQAMGEAERI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="56" xmlns="http://uniprot.org/uniprot">
    <accession>E3E7I8</accession>
    <name>E3E7I8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PPSC2_13250</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO56793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371397.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c2827"/>
    <dbReference type="EnsemblBacteria" id="ADO56793">
        <property type="protein sequence ID" value="ADO56793"/>
        <property type="gene ID" value="PPSC2_13250"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_13250"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.2821"/>
    <dbReference type="eggNOG" id="COG0738">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021993_2_0_9"/>
    <dbReference type="OMA" id="RSPALWM"/>
    <dbReference type="OrthoDB" id="1121832at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="226"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="258"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="287"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="311"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="352"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="375"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="6"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ADO56793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="406" mass="43836" checksum="B391E7C82C33BC51" modified="2011-01-11" version="1">MMATWFLIIIYLAFISLGIPDSLFGAAWPVMWPELGADFGSAGIVSMVVAGGTIVSSLASGTIIEKIGTGKITLMSCFLTAGALLGFSFAPSLFWLVLLAIPLGLGGGAVDAALNQYVATHYKAHHMSWLHCFWGVGATMGPIIMSFYISNYNSWRSGYTAVSMIQWGLVIILLITLPLWKRVNAIQDSIISEAQSDYSQMDHNIAQVENTPKQNLIRMKGVKNTLVAFLFYCGVEATVGLWGASFLVGARNIPAETAAGWVSLYYGGITVGRLITGFVTLKINNRILIRIGQLTAVAGGLILLFPLPVAFLLPGFILIGLGLAPIYPGLLHETPTRFGKENSAKLMGYQMAVAYTGTTLLPPIVGLIASQVSIHFFPVAVLVFLLFMLLSSEQVNRILRKRILKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3E834</accession>
    <name>E3E834_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Tyrosine recombinase XerC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">xerC</name>
        <name evidence="15" type="synonym">xerD5</name>
        <name evidence="15" type="ORF">PPSC2_14920</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the 'phage' integrase family. XerC subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the 'phage' integrase family. XerD subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371740.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_02555"/>
    <dbReference type="EnsemblBacteria" id="ADO57147">
        <property type="protein sequence ID" value="ADO57147"/>
        <property type="gene ID" value="PPSC2_14920"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_14920"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3183"/>
    <dbReference type="eggNOG" id="COG4974">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_027562_9_6_9"/>
    <dbReference type="OMA" id="HSFASHM"/>
    <dbReference type="OrthoDB" id="745068at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009037">
        <property type="term" value="F:tyrosine-based site-specific recombinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01808">
        <property type="entry name" value="Recomb_XerC_XerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013146">
        <property type="entry name" value="LEM-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011932">
        <property type="entry name" value="Recomb_XerD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023009">
        <property type="entry name" value="Tyrosine_recombinase_XerC/XerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02899">
        <property type="entry name" value="Phage_int_SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02225">
        <property type="entry name" value="recomb_XerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50955">
        <property type="entry name" value="LEM_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4 10" id="KW-0132">Cell division</keyword>
    <keyword evidence="5 10" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="3 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 10" id="KW-0229">DNA integration</keyword>
    <keyword evidence="8 10" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7 10 11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="14">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="LEM-like" evidence="12">
        <location>
            <begin position="105"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="13">
        <location>
            <begin position="106"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <feature type="active site" description="O-(3'-phospho-DNA)-tyrosine intermediate" evidence="10">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO57147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="314" mass="35287" checksum="F25BEF53CE0FB695" modified="2011-01-11" version="1">MKMYIQPFVQYMEEEKGLSRSTLEAYQRDVQQFAEFAESCGLEQPDNVQRSHLVLYLGHLKEQGKAAATISRSVASIRSFFHFLIREGIAIHDPSVLVELPKATKKKPSVLTQDEIERLLAAPDVSAPQGGRDKAMLELLYATGIRVSELIALNVCDVRIDLRFVHCGGEAGKERVVPISREASQWAQAYLDEQRPALLRPGQGEEAQTKQEALFLNVSGQRLSRQGFWKIIKKYAQEAGISKDITPHTLRHSFAVHMLEGGADLRSVQEMLGHADLATTQVYAQTARRNMKEVYEMHHPHGGNRTSHDSKDQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="49" xmlns="http://uniprot.org/uniprot">
    <accession>E3E893</accession>
    <name>E3E893_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytrP</name>
        <name evidence="2" type="ORF">PPSC2_15580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371872.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03230"/>
    <dbReference type="EnsemblBacteria" id="ADO57285">
        <property type="protein sequence ID" value="ADO57285"/>
        <property type="gene ID" value="PPSC2_15580"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15580"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3327"/>
    <dbReference type="eggNOG" id="COG2199">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="eggNOG" id="COG2203">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_021081_1_0_9"/>
    <dbReference type="OMA" id="FHIDHFE"/>
    <dbReference type="OrthoDB" id="1635706at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13185">
        <property type="entry name" value="GAF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="1">
        <location>
            <begin position="529"/>
            <end position="658"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="661" mass="75610" checksum="240C5769F7EF8A6D" modified="2011-01-11" version="1">MSEFSTTDQQTLDSKTVQASGAPLFDDKGYTSFAWLQNMDMTPYDYPYINQLLVQGYRNWLQQSNGISWISEEYTAVFNFTGVRVAGREEDDDEDLELVERCCISREMEVSQRKLRDGSLTFVYMVPILCRNYKREPFAALRFTRPAQHFVSNQDALLVASLHFRSCFYSKFEYIFMEDILGMQNRSEREGRRRSILFQIVKRMHDKIDVEGVLDEVFGSIAYLFPHVDITLYMSQDRHSRNPQVKPLLLHERDEDVCVRAFMKGQMAVNEPAGPQDEITEIGIPLRGKQGVYGVFHMILPAGADSMEKVDVELIAMMADTAGTAFENAKLLEQSNVLIHELRLINELVQRLNQSLKLNEIFEFAVQELLKMFMADFCCIVQLDQDGSCFRVMSSNVESLKLESYPREGGFAGLICKTGEPVIVSDYRKDGKISSRFMDTTDSQSLMAVPMKNRGTPRGVILLSSKLPHFFSYDNYKMLQMLAPHIGLAVTNAMLHAEVRRLANMDMLTGLYVRHYVDRIIQEHQEKDFCGSLILVDIDQFKQVNDTYGHQTGDEILKSVSNIVRSATRDEDVCARWGGEELAIYLPQLGVQQALGYAEKIRSCVQHETNPQVTVSCGIAEWNWLDEQISIESLFYRADMALYEAKNEGRNRIVIDHVGDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="69" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8C7</accession>
    <name>E3E8C7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Nitrite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nasC</name>
        <name evidence="7" type="ORF">PPSC2_15745</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mo-bis(molybdopterin guanine dinucleotide)</name>
            <dbReference type="ChEBI" id="CHEBI:60539"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57319.2"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_014600039.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03440"/>
    <dbReference type="EnsemblBacteria" id="ADO57319">
        <property type="protein sequence ID" value="ADO57319"/>
        <property type="gene ID" value="PPSC2_15745"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15745"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3360"/>
    <dbReference type="eggNOG" id="COG0243">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000422_13_4_9"/>
    <dbReference type="OrthoDB" id="323168at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006655">
        <property type="entry name" value="Mopterin_OxRdtase_prok_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00490">
        <property type="entry name" value="MOLYBDOPTERIN_PROK_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 5" id="KW-0408">Iron</keyword>
    <keyword evidence="4 5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="6">
        <location>
            <begin position="16"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="23"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="26"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ADO57319.2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="726" mass="79541" checksum="F24E4A14CF28F262" modified="2015-05-27" version="2">MCQSGENKLEVGQFILPVVETQCPFCSVQCKMTVSTETETLAGIIRTVYKAEGKSNAASQGRLCIKGMNAHQHATHAERLTQPLLRKEGKLVPVQWGEAMDAVGSSFSSLLSTQGPDGIGIYGGGSLSNETAYLLGKFARVAIGTRYIDYNGRFCMSAAASAGSKVFGIDRGLTCRLADIPLARCIVLAGTNIAECQPTLMPYFHQAKENGAFVIVIDPRATPTAAIADLHLQIRPGTDAVLANAMLKVIVDEGLVNEEFIRKRTNGYEQLLTHLDGVDLNESAALCGVEAEMIRQAARAFGSVETGIVFTARGVEQQTDGHMAVRAFLNLVLATGKIGREGCGYGAITGQGNGQGGREHGQKADQLPGYRSIENEEDRAYVASVWGVEPSSLPGKGVSAYEMMELVHQREIQALFVMGSNPVVSNPNARLVEEALKKLDLLIVADMFLTETARMADVVLPVTSYLENTGTMTNLEGRVLLREAVRIAPGEARDDWSILCQIASRLNKGGYFAYKDTEDIFEELRLASRGGVADYYGITYDRLRREEGVYWPCPSTDEAGMDTMFRESFALSDRRAVFTVVESCGAGEEISEEYPLTLTNGRVLAHYLTGAQTRRSPSLAAREIENYVEIHPRTAQRWYIKDGEWVEIVSQRGSFTVRSRIRPHIREDTLFVPMHWGGAQNVNRATRPDLDPFCRMPGFKTAAVRIRPLRLAVSATSGHNGEWSQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="72" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8J9</accession>
    <name>E3E8J9_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RNA polymerase sigma factor SigA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">sigA</name>
        <name evidence="10" type="ORF">PPSC2_16810</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Interacts transiently with the RNA polymerase catalytic core.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the sigma-70 factor family. RpoD/SigA subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_007431230.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04145"/>
    <dbReference type="EnsemblBacteria" id="ADO57548">
        <property type="protein sequence ID" value="ADO57548"/>
        <property type="gene ID" value="PPSC2_16810"/>
    </dbReference>
    <dbReference type="GeneID" id="66576683"/>
    <dbReference type="KEGG" id="ppm:PPSC2_16810"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3587"/>
    <dbReference type="eggNOG" id="COG0568">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014793_3_3_9"/>
    <dbReference type="OMA" id="YQRWLAE"/>
    <dbReference type="OrthoDB" id="1565734at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00963">
        <property type="entry name" value="Sigma70_RpoD_SigA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009042">
        <property type="entry name" value="RNA_pol_sigma70_r1_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007624">
        <property type="entry name" value="RNA_pol_sigma70_r3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007127">
        <property type="entry name" value="RNA_pol_sigma_70_r1_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042189">
        <property type="entry name" value="RNA_pol_sigma_70_r1_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012760">
        <property type="entry name" value="RNA_pol_sigma_RpoD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028630">
        <property type="entry name" value="Sigma70_RpoD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03979">
        <property type="entry name" value="Sigma70_r1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00140">
        <property type="entry name" value="Sigma70_r1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04539">
        <property type="entry name" value="Sigma70_r3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02393">
        <property type="entry name" value="RpoD_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00715">
        <property type="entry name" value="SIGMA70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00716">
        <property type="entry name" value="SIGMA70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="8">
        <location>
            <begin position="168"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_sigma70" evidence="9">
        <location>
            <begin position="337"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="6">
        <location>
            <begin position="338"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="region of interest" description="Sigma-70 factor domain-2" evidence="6">
        <location>
            <begin position="144"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Sigma-70 factor domain-3" evidence="6">
        <location>
            <begin position="223"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="region of interest" description="Sigma-70 factor domain-4" evidence="6">
        <location>
            <begin position="312"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="299"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Interaction with polymerase core subunit RpoC" evidence="6">
        <location>
            <begin position="168"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS00715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS00716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO57548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="377" mass="43368" checksum="296E185089C87B41" modified="2011-01-11" version="1">MANDQHTELETELTLDQVKDQLIELGKKSSSLNYKDIMEKLSPFDQDPEQMDEFYEQLGDLGIEVVNDNDEEVTRLRQNDDPENNDGDDFNFDDDLSLPPGIKINDPVRMYLKEIGRVPLLSADDEVELAKRINNGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDYEKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPTPEEVAAEMELSVEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQEALAPADAAAYELLKEQLEDVLDTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3E8Q8</accession>
    <name>E3E8Q8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_17830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372347.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c3813"/>
    <dbReference type="EnsemblBacteria" id="ADO57767">
        <property type="protein sequence ID" value="ADO57767"/>
        <property type="gene ID" value="PPSC2_17830"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_17830"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3810"/>
    <dbReference type="eggNOG" id="ENOG502Z7N6">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_059901_0_0_9"/>
    <dbReference type="OMA" id="YKEIDYN"/>
    <dbReference type="OrthoDB" id="394174at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029278">
        <property type="entry name" value="Imm26"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15428">
        <property type="entry name" value="Imm26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO57767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="386" mass="44631" checksum="D62E955F98FB4795" modified="2011-01-11" version="1">MNSWLTNALRPYFGLETLEEHWDVVEIKEGYFICMDGDVIRKRISSKEDAYGEADVEIFTRDRAFVLPKTARGKEKKLNYTSVSSITAEGVSFSAGIRRDRNISYVTAVNSKTGVRLPITGCEHLHSKEEIIDWLQRYPSLVPNDYDRKLERLKHRKNLRYKTIPGDIFRVEIDLFTDGYVLVVGDLRQMQKDQLFAKESIWNSVMTMPLFVRPYLCTSRDRSITLESITAAPLSDTTWIVMDDSFMRGSYERIGHKALAEEDIVFPIGYGSSIDSSKERIYRLSWGTGTISKPEGKTVFKSSRELLNNGVYSGVIADCFGPWEEREWHHTLDNPLYREERRKALAEFGFPEDISYDEFNRQTGGLTRSEYLAYLTRTYSGKRKMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3E983</accession>
    <name>E3E983_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Antitermination protein NusG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nusG1</name>
        <name evidence="5" type="ORF">PPSC2_15915</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371942.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_03610"/>
    <dbReference type="EnsemblBacteria" id="ADO57357">
        <property type="protein sequence ID" value="ADO57357"/>
        <property type="gene ID" value="PPSC2_15915"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_15915"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3397"/>
    <dbReference type="eggNOG" id="COG0250">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_067287_2_1_9"/>
    <dbReference type="OMA" id="EKWYVIY"/>
    <dbReference type="OrthoDB" id="2027986at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006645">
        <property type="entry name" value="NGN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036735">
        <property type="entry name" value="NGN_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043425">
        <property type="entry name" value="NusG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265">
        <property type="entry name" value="PTHR30265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02357">
        <property type="entry name" value="NusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82679">
        <property type="entry name" value="SSF82679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NGN" evidence="4">
        <location>
            <begin position="1"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO57357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="173" mass="20188" checksum="FD49F57D34280CB5" modified="2011-01-11" version="1">MNWYVLFVRTGREERVKQLFNKWFDSEVYKPFIPIQERLFKVAGTVKKELAPLFPSYVFIESNLPDLQFVTSTNSMIYTSSDIIRLLRYSKLEASMRDCERQVLESLCNDRYCIECSTGIIEGDNIRIIEGPLKGRSSIVKKIDRHKRQAVIQLEFMGDIRLVNVALEIISKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9A9</accession>
    <name>E3E9A9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cellobiose phosphorylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_16025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013371968.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57382">
        <property type="protein sequence ID" value="ADO57382"/>
        <property type="gene ID" value="PPSC2_16025"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16025"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3424"/>
    <dbReference type="eggNOG" id="ENOG50331PB">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_192234_0_0_9"/>
    <dbReference type="OMA" id="DAYYNCL"/>
    <dbReference type="OrthoDB" id="2017726at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="75" mass="8633" checksum="E9B5C06B883EEA42" modified="2011-01-11" version="1">MDAYYNCLNCMNKRVRILTIDGKQYEGTITDVDRNNVYLKTERNGRVQTSAFYPYGYGNQILTLSLFTLLAIALI</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="64" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9E7</accession>
    <name>E3E9E7_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yccW</name>
        <name evidence="2" type="ORF">PPSC2_16940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372160.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_04275"/>
    <dbReference type="EnsemblBacteria" id="ADO57579">
        <property type="protein sequence ID" value="ADO57579"/>
        <property type="gene ID" value="PPSC2_16940"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_16940"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3617"/>
    <dbReference type="eggNOG" id="COG1092">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_014042_0_0_9"/>
    <dbReference type="OMA" id="DCFCHTG"/>
    <dbReference type="OrthoDB" id="468283at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025714">
        <property type="entry name" value="Methyltranfer_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002478">
        <property type="entry name" value="PUA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036974">
        <property type="entry name" value="PUA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041532">
        <property type="entry name" value="RlmI_PUA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13847">
        <property type="entry name" value="Methyltransf_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17785">
        <property type="entry name" value="PUA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PUA" evidence="1">
        <location>
            <begin position="2"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="459" mass="51134" checksum="C9C9B40A70DB64ED" modified="2011-01-11" version="1">MPSVILERSRKKRLEQAHPWVFKNEIAKIEGDPEAGDLVNILNHQGRYLATGYYNPASQITVRVMSYEPLEVMDQSFFAQRFRNCLEHRERFVTGGNAYRLVYGEADFLPGLIVDRFGDVLVVQLLTLGMDRRREEIRDALVEVMGPVGIYERSDVSIRELEGLEQTKGPLYGDCPRHVVVTENGLQIKVDIEEGQKTGYFFDQRENRAAIAPLMTGWGARSGITLQEVAATPGDDATTVMKPVNKSGKVVEFPFWDGATVLECFSHTGSFTLNACKHGAKKVTCLDISEHAIESARDNVKLNGFEDRVEFVVDDAFQYLRNQVKGVEERTARAGGKGDTSKPLTAGGGRTFDVVILDPPAFAKTKSAVKGATRGYKDINLHGMKLVNEGGYLVTASCSFHMRPELFLDTIKEAATDAGKTLRLVDWRAAGKDHPQILGVEEGHYLKFAIFEVRSRTRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3E9U9</accession>
    <name>E3E9U9_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cell wall assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_18395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO57889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372468.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO57889">
        <property type="protein sequence ID" value="ADO57889"/>
        <property type="gene ID" value="PPSC2_18395"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_18395"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.3937"/>
    <dbReference type="eggNOG" id="ENOG502ZBAM">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_137413_0_0_9"/>
    <dbReference type="OMA" id="WDHENSA"/>
    <dbReference type="OrthoDB" id="1776264at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018958">
        <property type="entry name" value="Knr4/Smi1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00860">
        <property type="entry name" value="SMI1_KNR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160631">
        <property type="entry name" value="SSF160631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMI1_KNR4" evidence="1">
        <location>
            <begin position="12"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO57889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="157" mass="18152" checksum="188E02DB61EDC355" modified="2011-01-11" version="1">MKIQNESIISPLPDRNLIMRVEENFEIKFPNDFINFISKNNGVIPITRFFEYKSNRYVVDRFLCLLDNPGEHDKGMYDIKVVFSQLDERILSDGDITGAELVPFAALFAGDFVCLDFSESKTDPVICIWYNEESDDYDPVTEKIADNVNSFLDMLEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-09-29" version="41" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA31</accession>
    <name>E3EA31_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372894.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="ADO58323">
        <property type="protein sequence ID" value="ADO58323"/>
        <property type="gene ID" value="PPSC2_20420"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20420"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4356"/>
    <dbReference type="eggNOG" id="ENOG5030607">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_190693_0_0_9"/>
    <dbReference type="OMA" id="HYDRNIT"/>
    <dbReference type="OrthoDB" id="1982295at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="81" mass="9362" checksum="F2DA6F4745DC69EA" modified="2011-01-11" version="1">MEPKKTPRVLQKNIEFFTAALSQHLVSVWQEDPAGVYCEIGCGYIELFSSEMIRVRNQDGTPSHYDRNITMFQLITKDQPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="43" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA93</accession>
    <name>E3EA93_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA alkylation repair protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_20715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372954.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07960"/>
    <dbReference type="EnsemblBacteria" id="ADO58385">
        <property type="protein sequence ID" value="ADO58385"/>
        <property type="gene ID" value="PPSC2_20715"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20715"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4418"/>
    <dbReference type="eggNOG" id="COG4912">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_095329_0_0_9"/>
    <dbReference type="OMA" id="DNWATCD"/>
    <dbReference type="OrthoDB" id="1933111at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014825">
        <property type="entry name" value="DNA_alkylation"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08713">
        <property type="entry name" value="DNA_alkylation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO58385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="229" mass="26858" checksum="5FA40FB7435032A7" modified="2011-01-11" version="1">MEKTIREQILSQVDTDFQKFTAALLPTINNVLGVRLPVLRKLAQDIAKGDWRLYLETAESEHFEEVMLQGMVIGSVKTDIEEVLSYTAKFVPKIDNWSVCDSFCAGLKITKQHKEKVWDFIQPYLFSKKEYEIRFGVVMLLNFYIEEQYINRVLTLLDQTHREDYYVQMAVAWAISICYIKLPEVTMAYLSHNALDDFTFNKALQKITESYRVDQATKTTIRSMKRKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="50" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA94</accession>
    <name>E3EA94_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-3-methyladenine glycosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">alkA</name>
        <name evidence="2" type="ORF">PPSC2_20720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372955.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07965"/>
    <dbReference type="EnsemblBacteria" id="ADO58386">
        <property type="protein sequence ID" value="ADO58386"/>
        <property type="gene ID" value="PPSC2_20720"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20720"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4419"/>
    <dbReference type="eggNOG" id="COG0122">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_72_5_9"/>
    <dbReference type="OMA" id="RTVAAWY"/>
    <dbReference type="OrthoDB" id="1781735at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00056">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003265">
        <property type="entry name" value="HhH-GPD_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00730">
        <property type="entry name" value="HhH-GPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00478">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ENDO3c" evidence="1">
        <location>
            <begin position="53"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO58386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="205" mass="23146" checksum="A8C07185389C6883" modified="2011-01-11" version="1">METVMTKNFDYGEKEINYLKTVDTVLGAAITQMGKVERVIIPDLFAALVHAIVGQLISAKAVQTIWTRMQEKLGAITPQNIAVQTAQEIQSCGITMKKAACILNIAQTIEQGLLDLQELYELSDTQVIQKLSSLQGIGPWTAEMMLINCMERPDVVSWGDMAIRRGMMKLYHLDTLTKQQFEEYRRVYSPYGSVASIYLWSISFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EA97</accession>
    <name>E3EA97_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="10">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">adaA3</name>
        <name evidence="10" type="ORF">PPSC2_20735</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">SC2</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372958.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_07980"/>
    <dbReference type="EnsemblBacteria" id="ADO58389">
        <property type="protein sequence ID" value="ADO58389"/>
        <property type="gene ID" value="PPSC2_20735"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20735"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4422"/>
    <dbReference type="eggNOG" id="COG2169">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000445_81_3_9"/>
    <dbReference type="OMA" id="HEWIALV"/>
    <dbReference type="OrthoDB" id="1327994at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035451">
        <property type="entry name" value="Ada-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004026">
        <property type="entry name" value="Ada_DNA_repair_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016220">
        <property type="entry name" value="Me-P-triester_DNA_alkyl-Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02805">
        <property type="entry name" value="Ada_Zn_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000408">
        <property type="entry name" value="Alkyltransferas_AdaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57884">
        <property type="entry name" value="SSF57884"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="9">
        <location>
            <begin position="86"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ADO58389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="201" mass="23089" checksum="474CEB327F1BD0C3" modified="2011-01-11" version="1">MSTSDLSITDEKWRAIVENDKSYDGVFLYAVKTTKIFCRPSCKSRPPKRENIRLFTSAEQALAEHFRPCKRCKPTGQRLPDHDWIAGVAEYVDSNYMKDLTLHVLAEISHGSPYHLHRTFKRIMHVTPMEYIQRTRLKQAKKLLICSHQSVAEVGENVGLSNIPYFITLFKKNTGYTPLQYRQLESKATQKGGTQHGTSNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-01-19" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAA8</accession>
    <name>E3EAA8_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Dihydroorotate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gufA</name>
        <name evidence="6" type="ORF">PPSC2_21460</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373094.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08655"/>
    <dbReference type="EnsemblBacteria" id="ADO58526">
        <property type="protein sequence ID" value="ADO58526"/>
        <property type="gene ID" value="PPSC2_21460"/>
    </dbReference>
    <dbReference type="GeneID" id="66575777"/>
    <dbReference type="KEGG" id="ppm:PPSC2_21460"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4563"/>
    <dbReference type="eggNOG" id="COG0428">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015114_1_2_9"/>
    <dbReference type="OMA" id="MIFVVIE"/>
    <dbReference type="OrthoDB" id="1469769at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046873">
        <property type="term" value="F:metal ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003689">
        <property type="entry name" value="ZIP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02535">
        <property type="entry name" value="Zip"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="36"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="59"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="167"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="192"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="224"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ADO58526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="243" mass="26198" checksum="65133E9C0595BDC1" modified="2011-01-11" version="1">MNDVFVGSLISALSTGLGAVPILFMRNITHRLRDVLLAYAAGIMTSASVYNLIPEAIQHSNWFVLTAGILLGCLVLLVMEMYIPHADLEDPDSKTFQLESKSFLIIAAITLHNLPEGLSVGVSYASETQNLGNLIAFSIGLQNAPEGFIVALFLVNQNIGRFKALGIATLTGAVEIITSLIGFYLSSWVNGLVPYGLAFAAGAMMFIVYKELIPESHGDGNQRIATFSFILGLITMIGLTEWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAI8</accession>
    <name>E3EAI8_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glutamate--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Glutamyl-tRNA synthetase</fullName>
            <shortName evidence="8">GluRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">gltX3</name>
        <name evidence="8" type="synonym">gltX</name>
        <name evidence="12" type="ORF">PPSC2_22545</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu)</text>
            <dbReference type="Rhea" id="RHEA:23540"/>
            <dbReference type="Rhea" id="RHEA-COMP:9663"/>
            <dbReference type="Rhea" id="RHEA-COMP:9680"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.17" evidence="8"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373285.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_10010"/>
    <dbReference type="EnsemblBacteria" id="ADO58746">
        <property type="protein sequence ID" value="ADO58746"/>
        <property type="gene ID" value="PPSC2_22545"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_22545"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4779"/>
    <dbReference type="eggNOG" id="COG0008">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_015768_6_3_9"/>
    <dbReference type="OMA" id="WDEGPFF"/>
    <dbReference type="OrthoDB" id="1409413at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004818">
        <property type="term" value="F:glutamate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006424">
        <property type="term" value="P:glutamyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00808">
        <property type="entry name" value="GluRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00022">
        <property type="entry name" value="Glu_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045462">
        <property type="entry name" value="aa-tRNA-synth_I_cd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020751">
        <property type="entry name" value="aa-tRNA-synth_I_codon-bd_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008925">
        <property type="entry name" value="aa_tRNA-synth_I_cd-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004527">
        <property type="entry name" value="Glu-tRNA-ligase_bac/mito"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000924">
        <property type="entry name" value="Glu/Gln-tRNA-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033910">
        <property type="entry name" value="GluRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19269">
        <property type="entry name" value="Anticodon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00987">
        <property type="entry name" value="TRNASYNTHGLU"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48163">
        <property type="entry name" value="SSF48163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00464">
        <property type="entry name" value="gltX_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="tRNA-synt_1c" evidence="10">
        <location>
            <begin position="4"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_2" evidence="11">
        <location>
            <begin position="339"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="11"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="252"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="255"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF19269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ADO58746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="486" mass="55927" checksum="6EB556E8E832A0C4" modified="2011-01-11" version="1">MSTEVRVRYAPSPTGHLHIGNARTALFNYLFARNQGGKFIIRIEDTDVKRNIEGGEESQLKYLKWLGMDWDESIDVGGEFGPYRQTERLDIYKTYWQDLLDRGLAYRCYCTEEELEREREEQMERGETPRYSGKHRDLTEEQCQAFEAEGRVPSIRFRVPEDREYTFDDIVKGQITFNSKESGDFVIVKKDGIPTYNFAVAVDDYLMKISHVLRGEDHVSNTPRQLMIFEALGWEPPRFGHMTLIVGEDHKKLSKRNESIIQFMEQYDKLGYLPEAIFNFIALLGWSPEGEEEIYDREQLISIFDPNRLSKSPAVFDTNKLAYLNNHYIKKADPERIASMAIPHLQAAGLLPNELSTEQQDWAKALVRLYQEQMTSASDIVALSELFFRSHLELDADAAAVLAEEQVPDVLRAFAGKVETSEEFTAPQMAKLIKEVQKETGFKGKQLFMPIRVALTGQTHGRDLNETIYLLGRDKVLDRLKAQIKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="65" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAW4</accession>
    <name>E3EAW4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 11">Nitric oxide synthase oxygenase</fullName>
            <ecNumber evidence="5 11">1.14.14.47</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">nos</name>
        <name evidence="15" type="ORF">PPSC2_23875</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 11">Catalyzes the production of nitric oxide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 L-arginine + 4 O2 + 3 reduced [flavodoxin] = 5 H(+) + 4 H2O + 2 L-citrulline + 2 nitric oxide + 3 oxidized [flavodoxin]</text>
            <dbReference type="Rhea" id="RHEA:52324"/>
            <dbReference type="Rhea" id="RHEA-COMP:10622"/>
            <dbReference type="Rhea" id="RHEA-COMP:10623"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16480"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="EC" id="1.14.14.47"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 11 12">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homodimer.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="11">This protein is similar to the oxygenase domain of eukaryotic nitric oxide synthases but lacks the reductase domain which, in eukaryotes, is responsible for transfer of electrons to the ferric heme during nitric oxide synthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the NOS family. Bacterial NOS oxygenase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.14.14.47" evidence="5 11"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373564.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_11380"/>
    <dbReference type="EnsemblBacteria" id="ADO59028">
        <property type="protein sequence ID" value="ADO59028"/>
        <property type="gene ID" value="PPSC2_23875"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23875"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5052"/>
    <dbReference type="eggNOG" id="COG4362">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_040293_0_0_9"/>
    <dbReference type="OMA" id="IWNHQLI"/>
    <dbReference type="OrthoDB" id="1223596at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004517">
        <property type="term" value="F:nitric-oxide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006809">
        <property type="term" value="P:nitric oxide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017142">
        <property type="entry name" value="Nitric_oxide_synthase_Oase-su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044943">
        <property type="entry name" value="NOS_dom_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044940">
        <property type="entry name" value="NOS_dom_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044944">
        <property type="entry name" value="NOS_dom_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004030">
        <property type="entry name" value="NOS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036119">
        <property type="entry name" value="NOS_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02898">
        <property type="entry name" value="NO_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037219">
        <property type="entry name" value="NOS_oxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56512">
        <property type="entry name" value="SSF56512"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS60001">
        <property type="entry name" value="NOS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11 12" id="KW-0349">Heme</keyword>
    <keyword evidence="10 11 12" id="KW-0408">Iron</keyword>
    <keyword evidence="8 11 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NOS" evidence="14">
        <location>
            <begin position="66"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="368"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="12">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00018859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR037219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR037219-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS60001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ADO59028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="387" mass="43670" checksum="16B3C7B5675064A1" modified="2011-01-11" version="1">MEVKQQLLHEAEQFIYTCYEELGRSRDDAEARLLDIRHDIETIGTYDHTYEELEHGALMAWRNSNRCIGRLFWDKLLVRDARGASDATQVVHELLEHIRIGTNGGKIKPTLTVFRASQPGQPNIRIWNHQLIRYAGYETDQGVIGDPISVDFTNACRDLGWQGAMTAFDILPLVVEAGGQPPKLFDIPEHLVMEVPIEHPELSYIASLGLRWYAVPMISDMTLEIGGIIYTAAPFNGWYMGTEIGARNFADTFRYNMLPQVAKLMGLDTTSETTLWRDRALVELNIAVLHSFKKAGVSIVDHHTAAAQFKLFEEREAKAGRVLTGNWTWLIPPLSPATTHIFHSSYDNRLVKPNFGVQEKPYMTRQAKPTTDAALPQKPQGCPFHSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2021-06-02" version="42" xmlns="http://uniprot.org/uniprot">
    <accession>E3EAX4</accession>
    <name>E3EAX4_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Lipase_3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PPSC2_23925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373573.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5100"/>
    <dbReference type="EnsemblBacteria" id="ADO59038">
        <property type="protein sequence ID" value="ADO59038"/>
        <property type="gene ID" value="PPSC2_23925"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_23925"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5062"/>
    <dbReference type="eggNOG" id="COG5153">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_054707_0_0_9"/>
    <dbReference type="OMA" id="WYIRTAT"/>
    <dbReference type="OrthoDB" id="424066at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipase_3" evidence="1">
        <location>
            <begin position="136"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADO59038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="486" mass="53913" checksum="371BF4FCE746DFEA" modified="2011-01-11" version="1">MQYISEKTYWKIADEAYQLDIDPKTYKNEDIPGWRVVDLDEKLIHDTNGSGFDATVFHNEDSNQVIIGYRGTEPGGRPLWSRMMDIGTDINDVMGGRAKNLNQLHDYYVNNQEEIEKLPLQVQSSFHQYEAQYQDNQFTKAQTLYDEVKKKYPAAEISTTGHSLGGAEAEYVAVKNGLSSVSFAAPSIVHLLPEDLQKRVKAGEFKKTNVAFAHPGDSVGGGATKANQHVGETYHIGSDYKTANVAKFTIPVSIPLERKTELGRLFLGPKWTPIVYVPITLPMMQQDAFTKFYNSVLGGEKTHGMEHFTFDENGNISNPLYTMDGQLVEGNPRVQAYEQMLAAQAELKQVMGDLVERYGGQLGAFGQFAANALGVNLMGAGQNDRANGGAYFVGNKNGGTIQLTPEELKHAANQMRSSLHGFSSDTRASIQLFQAHIGTSESQSLTPLAHSATATLDRINRWYQESITEIAEYIDRKGQEFTMVDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="45" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB47</accession>
    <name>E3EB47_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PPSC2_25215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO59327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373860.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="886882.PPSC2_c5391"/>
    <dbReference type="EnsemblBacteria" id="ADO59327">
        <property type="protein sequence ID" value="ADO59327"/>
        <property type="gene ID" value="PPSC2_25215"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_25215"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.5344"/>
    <dbReference type="eggNOG" id="ENOG5032RVV">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_123371_0_0_9"/>
    <dbReference type="OrthoDB" id="1833498at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025409">
        <property type="entry name" value="DUF4303"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14136">
        <property type="entry name" value="DUF4303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADO59327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="186" mass="21290" checksum="12EA53E83B02CAB8" modified="2011-01-11" version="1">MKPTQEIEALTAEIADVARTSFRTLFENGERYYYCTLFTTGEGHAPSISAWSWEALEREAARQGEESDTPESTIAELIKWSYADSPYCCFRDENFDDVKQLFMERPSIAELEADEWNREFDSRLKAMELAMKRLDDEGIFALNQPRESVCVLVEVMPPDEINTEIALRLNQAESPAMQAWLAEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="55" xmlns="http://uniprot.org/uniprot">
    <accession>E3EB80</accession>
    <name>E3EB80_PAEPS</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bacitracin ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">potA9</name>
        <name evidence="5" type="ORF">PPSC2_20840</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">SC2</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013372981.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08085"/>
    <dbReference type="EnsemblBacteria" id="ADO58412">
        <property type="protein sequence ID" value="ADO58412"/>
        <property type="gene ID" value="PPSC2_20840"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_20840"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4444"/>
    <dbReference type="eggNOG" id="COG1136">
        <property type="taxonomic scope" value="Bacteria"/>
    </dbReference>
    <dbReference type="HOGENOM" id="CLU_000604_1_22_9"/>
    <dbReference type="OMA" id="TDINFRV"/>
    <dbReference type="OrthoDB" id="1181903at2"/>
    <dbReference type="Proteomes" id="UP000006868">
        <property type="component" value="Chromosome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="39"/>
            <end position="46"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ADO58412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000006868"/>
        </source>
    </evidence>
    <sequence length="259" mass="29135" checksum="B9B8995423848EE9" modified="2011-01-11" version="1">MEIVRMDQVTKIYYGKVPHRALNNIHLTIQPGEFVGIMGPSGSGKTTLLNMISTIDMPTSGEVSIKGENPHLLKKDKLALFRRKELGLVFQDYNLLETLTLGENILFPLMLNKKGLKEMEHKLEEVAKKLDITDVLDKRPYEVSGGQKQRAAIGRAMIHSPSLLLADEPTGNLDSKSSRVVMEMLSLVHRVDYSTIVLVTHGALEASYCDRVIFIKDGELYNEIRRSHSQQIFFQEIIDMLSFLGGSRHAHELSSVSME</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="75" xmlns="http://uniprot.org/uniprot">
    <accession>E3EBD3</accession>
    <name>E3EBD3_PAEPS</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phosphopentomutase</fullName>
            <ecNumber evidence="4">5.4.2.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Phosphodeoxyribomutase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">deoB</name>
        <name evidence="6" type="ORF">PPSC2_21845</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Paenibacillus polymyxa (strain SC2)</name>
        <name type="synonym">Bacillus polymyxa</name>
        <dbReference type="NCBI Taxonomy" id="886882"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Firmicutes</taxon>
            <taxon>Bacilli</taxon>
            <taxon>Bacillales</taxon>
            <taxon>Paenibacillaceae</taxon>
            <taxon>Paenibacillus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="journal article" date="2011" name="J. Bacteriol." volume="193" first="311" last="312">
            <title>Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.</title>
            <authorList>
                <person name="Ma M."/>
                <person name="Wang C."/>
                <person name="Ding Y."/>
                <person name="Li L."/>
                <person name="Shen D."/>
                <person name="Jiang X."/>
                <person name="Guan D."/>
                <person name="Cao F."/>
                <person name="Chen H."/>
                <person name="Feng R."/>
                <person name="Wang X."/>
                <person name="Ge Y."/>
                <person name="Yao L."/>
                <person name="Bing X."/>
                <person name="Yang X."/>
                <person name="Li J."/>
                <person name="Du B."/>
            </authorList>
            <dbReference type="PubMed" id="21037012"/>
            <dbReference type="DOI" id="10.1128/JB.01234-10"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">SC2</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Phosphotransfer between the C1 and C5 carbon atoms of pentose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:27658"/>
            <dbReference type="ChEBI" id="CHEBI:57259"/>
            <dbReference type="ChEBI" id="CHEBI:62877"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>alpha-D-ribose 1-phosphate = D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:18793"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="EC" id="5.4.2.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="4">Binds 1 or 2 manganese ions.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route II): step 1/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the phosphopentomutase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.7" evidence="4"/>
    <dbReference type="EMBL" id="CP002213">
        <property type="protein sequence ID" value="ADO58607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_013373174.1">
        <property type="nucleotide sequence ID" value="NC_014622.2"/>
    </dbReference>
    <dbReference type="STRING" id="1406.LK13_08990"/>
    <dbReference type="EnsemblBacteria" id="ADO58607">
        <property type="protein sequence ID" value="ADO58607"/>
        <property type="gene ID" value="PPSC2_21845"/>
    </dbReference>
    <dbReference type="KEGG" id="ppm:PPSC2_21845"/>
    <dbReference type="PATRIC" id="fig|886882.15.peg.4647"/>
    <dbReference type="eggNOG" id=
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